Query 035967
Match_columns 381
No_of_seqs 259 out of 1336
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 13:30:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035967.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035967hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rt8_A Fimbrin; filamentous ac 100.0 1.1E-85 3.7E-90 680.3 23.0 369 1-371 56-483 (513)
2 1pxy_A Fimbrin-like protein; c 100.0 3E-84 1E-88 668.8 23.0 371 1-371 51-472 (506)
3 1aoa_A T-fimbrin; actin-bindin 100.0 2.8E-47 9.7E-52 364.4 13.7 199 1-201 68-275 (275)
4 3hoc_A Filamin-A; calponin hom 100.0 4.5E-43 1.5E-47 333.6 9.5 185 1-202 82-270 (272)
5 2wa7_A Filamin-B; disease muta 100.0 1.3E-42 4.4E-47 326.9 11.2 185 1-202 55-243 (245)
6 3f7p_A Plectin-1; plakin, hemi 100.0 7E-41 2.4E-45 321.7 12.9 187 102-373 73-260 (296)
7 1wku_A Alpha-actinin 3; calpon 100.0 4.3E-41 1.5E-45 318.0 10.2 178 1-203 62-244 (254)
8 3hoc_A Filamin-A; calponin hom 100.0 1.9E-40 6.5E-45 315.6 14.6 189 101-371 46-237 (272)
9 3f7p_A Plectin-1; plakin, hemi 100.0 4E-41 1.4E-45 323.4 9.0 182 1-203 108-292 (296)
10 4b7l_A Filamin-B; structural p 100.0 9.4E-41 3.2E-45 328.6 11.3 185 1-202 52-240 (347)
11 4b7l_A Filamin-B; structural p 100.0 3.4E-40 1.2E-44 324.6 14.9 189 102-372 17-208 (347)
12 1sh5_A Plectin 1, PLTN, PCN; a 100.0 1.1E-40 3.7E-45 313.7 9.0 181 1-202 52-235 (245)
13 2wa7_A Filamin-B; disease muta 100.0 1.3E-39 4.3E-44 306.5 15.2 189 101-371 19-210 (245)
14 1wku_A Alpha-actinin 3; calpon 100.0 1.1E-39 3.7E-44 308.4 13.7 183 102-372 27-210 (254)
15 1dxx_A Dystrophin; structural 100.0 1.5E-40 5.3E-45 312.9 7.6 183 1-202 52-238 (246)
16 1sh5_A Plectin 1, PLTN, PCN; a 100.0 3.2E-39 1.1E-43 303.8 13.4 187 102-371 12-202 (245)
17 1rt8_A Fimbrin; filamentous ac 100.0 1.8E-39 6.1E-44 335.2 11.1 186 1-201 318-512 (513)
18 1dxx_A Dystrophin; structural 100.0 3.1E-38 1.1E-42 297.2 10.6 191 102-373 16-207 (246)
19 1aoa_A T-fimbrin; actin-bindin 100.0 7.3E-37 2.5E-41 292.3 16.5 193 102-371 24-246 (275)
20 1pxy_A Fimbrin-like protein; c 100.0 1.9E-37 6.4E-42 319.7 12.3 188 1-202 309-502 (506)
21 1sjj_A Actinin; 3-helix bundle 100.0 1.3E-35 4.4E-40 323.3 4.2 178 1-203 43-225 (863)
22 1sjj_A Actinin; 3-helix bundle 100.0 1.7E-34 5.7E-39 314.4 10.1 183 102-372 8-191 (863)
23 1wyl_A NEDD9 interacting prote 99.9 1.6E-26 5.3E-31 193.0 9.2 101 101-202 6-108 (116)
24 1bkr_A Spectrin beta chain; fi 99.9 1.5E-26 5.2E-31 191.0 9.0 102 101-203 2-106 (109)
25 1bhd_A Utrophin; calponin homo 99.9 1.1E-26 3.8E-31 194.4 5.5 105 98-203 4-111 (118)
26 2d89_A EHBP1 protein; all alph 99.9 3.5E-26 1.2E-30 191.7 8.2 102 100-202 7-111 (119)
27 1wyq_A Spectrin beta chain, br 99.9 1E-25 3.4E-30 190.9 10.8 101 101-202 6-109 (127)
28 2vzc_A Alpha-parvin; membrane, 99.9 8.1E-26 2.8E-30 192.5 9.6 108 102-281 22-129 (131)
29 2d87_A Smoothelin splice isofo 99.9 1.2E-25 4.1E-30 190.6 10.2 104 100-204 5-112 (128)
30 2d88_A Protein mical-3; all al 99.9 5.8E-26 2E-30 190.8 7.6 101 101-202 8-112 (121)
31 1wjo_A T-plastin; CH domain, a 99.9 5.2E-25 1.8E-29 184.5 7.9 101 102-202 7-113 (124)
32 2yrn_A Neuron navigator 2 isof 99.9 7.7E-23 2.6E-27 173.8 7.5 108 102-281 18-125 (129)
33 1wjo_A T-plastin; CH domain, a 99.8 1.5E-21 5.1E-26 163.5 6.7 81 292-372 3-84 (124)
34 1wyl_A NEDD9 interacting prote 99.8 3.9E-19 1.3E-23 148.2 7.2 70 297-372 8-77 (116)
35 1wyq_A Spectrin beta chain, br 99.8 7.6E-19 2.6E-23 148.6 7.0 73 295-373 6-78 (127)
36 2vzc_A Alpha-parvin; membrane, 99.8 1.7E-19 5.9E-24 153.4 2.5 73 1-74 57-129 (131)
37 2d87_A Smoothelin splice isofo 99.7 9.6E-19 3.3E-23 148.1 6.9 70 298-373 9-78 (128)
38 2d88_A Protein mical-3; all al 99.7 4.2E-19 1.4E-23 149.0 4.3 69 298-372 11-79 (121)
39 1bkr_A Spectrin beta chain; fi 99.7 6.7E-19 2.3E-23 145.1 5.3 70 298-373 5-74 (109)
40 2d89_A EHBP1 protein; all alph 99.7 7.3E-19 2.5E-23 147.1 5.3 69 296-370 9-77 (119)
41 1bhd_A Utrophin; calponin homo 99.7 7E-19 2.4E-23 147.0 3.3 70 298-373 10-79 (118)
42 2yrn_A Neuron navigator 2 isof 99.6 3.4E-17 1.2E-21 138.9 0.7 71 1-74 55-125 (129)
43 1p2x_A RNG2 protein, RAS GTPas 98.9 9.7E-09 3.3E-13 89.8 10.6 139 103-322 12-157 (159)
44 1p5s_A RAS GTPase-activating-l 98.8 7.1E-09 2.4E-13 94.1 8.6 141 102-322 55-201 (203)
45 1p2x_A RNG2 protein, RAS GTPas 98.6 2.8E-08 9.5E-13 86.8 4.8 111 1-129 46-158 (159)
46 1p5s_A RAS GTPase-activating-l 98.2 5.5E-07 1.9E-11 81.6 3.5 111 1-129 90-202 (203)
47 1h67_A Calponin alpha; cytoske 98.1 9.1E-07 3.1E-11 72.2 3.2 84 104-264 5-89 (108)
48 3i6x_A P195, RAS GTPase-activa 98.1 3.4E-06 1.2E-10 75.8 6.9 98 102-264 47-145 (193)
49 1wyp_A Calponin 1; CH domain, 98.1 3.1E-06 1.1E-10 71.9 5.5 86 103-265 18-104 (136)
50 1wyr_A RHO guanine nucleotide 98.0 7E-06 2.4E-10 68.3 5.7 89 103-265 7-99 (121)
51 1wyn_A Calponin-2; CH domain, 98.0 4.2E-06 1.4E-10 71.9 4.5 86 103-265 18-104 (146)
52 1wyo_A Protein EB3, microtubul 98.0 2.7E-05 9.3E-10 67.4 9.5 102 102-216 22-128 (159)
53 2qjz_A Microtubule-associated 97.9 3.3E-05 1.1E-09 64.2 8.7 93 102-200 5-102 (123)
54 1wym_A Transgelin-2; CH domain 97.9 1E-05 3.6E-10 70.1 4.5 89 103-265 18-113 (155)
55 1ujo_A Transgelin; CH domain, 97.8 2.1E-05 7.3E-10 67.3 6.1 90 103-265 10-106 (144)
56 2l3g_A RHO guanine nucleotide 97.8 1.8E-05 6.1E-10 66.3 4.8 89 103-265 13-106 (126)
57 1wyr_A RHO guanine nucleotide 97.8 8.2E-06 2.8E-10 67.9 2.6 52 1-57 47-98 (121)
58 2rr8_A Iqgap1 protein; F-actin 97.8 6.6E-05 2.3E-09 67.2 8.5 98 103-265 26-124 (190)
59 1h67_A Calponin alpha; cytoske 97.7 5.3E-06 1.8E-10 67.6 -0.1 58 1-62 36-95 (108)
60 1wyn_A Calponin-2; CH domain, 97.6 2E-05 6.9E-10 67.6 2.2 67 1-71 50-118 (146)
61 1wyp_A Calponin 1; CH domain, 97.6 2.6E-05 8.8E-10 66.1 2.7 67 1-71 50-118 (136)
62 2l3g_A RHO guanine nucleotide 97.6 1.6E-05 5.6E-10 66.5 1.1 52 1-57 53-105 (126)
63 1ujo_A Transgelin; CH domain, 97.4 4.1E-05 1.4E-09 65.5 1.6 55 1-58 48-106 (144)
64 1wym_A Transgelin-2; CH domain 97.3 4.5E-05 1.5E-09 66.1 1.3 54 1-58 56-113 (155)
65 3i6x_A P195, RAS GTPase-activa 97.2 6.8E-05 2.3E-09 67.3 1.1 68 1-68 82-157 (193)
66 2rr8_A Iqgap1 protein; F-actin 97.2 6.2E-05 2.1E-09 67.4 0.1 58 1-58 60-124 (190)
67 2qjz_A Microtubule-associated 97.1 0.00064 2.2E-08 56.4 6.1 63 295-364 4-67 (123)
68 4abo_I MAL3, microtubule integ 97.1 0.0015 5.2E-08 55.3 7.6 91 103-200 7-102 (145)
69 2r8u_A Microtubule-associated 97.0 0.0018 6.1E-08 60.5 8.7 92 102-199 15-111 (268)
70 1wyo_A Protein EB3, microtubul 96.9 0.0014 4.8E-08 56.6 6.6 65 294-365 20-85 (159)
71 2ee7_A Sperm flagellar protein 96.9 0.00056 1.9E-08 57.1 3.9 59 300-363 19-77 (127)
72 2ee7_A Sperm flagellar protein 96.8 0.0023 7.8E-08 53.4 6.4 99 104-277 17-116 (127)
73 2qjx_A Protein BIM1; calponin 96.7 0.0047 1.6E-07 51.4 7.7 88 103-197 11-103 (127)
74 2r8u_A Microtubule-associated 94.9 0.041 1.4E-06 51.3 6.4 63 294-363 13-76 (268)
75 3ky9_A Proto-oncogene VAV; cal 93.7 0.048 1.6E-06 56.5 4.6 44 107-150 10-59 (587)
76 2qjx_A Protein BIM1; calponin 93.5 0.099 3.4E-06 43.4 5.2 64 293-364 7-71 (127)
77 4abo_I MAL3, microtubule integ 92.9 0.14 4.7E-06 43.3 5.3 60 296-363 6-66 (145)
78 3ky9_A Proto-oncogene VAV; cal 91.4 0.05 1.7E-06 56.4 1.1 57 1-57 48-106 (587)
79 1wix_A HOOK homolog 1, RSGI RU 90.8 0.19 6.7E-06 43.4 4.1 44 102-150 9-52 (164)
80 1wix_A HOOK homolog 1, RSGI RU 87.0 0.34 1.2E-05 41.9 2.9 42 299-346 12-53 (164)
81 1ji7_A ETS-related protein TEL 38.0 18 0.00063 27.6 2.5 36 297-336 16-52 (89)
82 1sxd_A GA repeat binding prote 32.9 32 0.0011 26.4 3.1 37 297-337 27-64 (91)
83 1sv0_A ETS DNA-binding protein 29.4 26 0.00087 26.6 2.0 36 297-336 14-50 (85)
84 2qar_B Telsam domain; polymer, 27.4 29 0.00098 26.7 2.0 37 297-337 16-53 (93)
85 2jv3_A ETS1 proto-oncogene; ET 26.8 48 0.0016 26.3 3.3 37 297-337 45-82 (110)
86 1sv0_C Modulator of the activi 25.2 29 0.00099 25.9 1.6 37 297-337 15-54 (82)
87 2e8p_A ELF3 protein; cell-free 24.9 71 0.0024 24.5 3.8 37 297-337 28-67 (92)
88 1x66_A Friend leukemia integra 24.0 41 0.0014 26.1 2.3 37 297-337 28-66 (98)
89 1sxe_A Transcriptional regulat 21.7 35 0.0012 26.5 1.5 37 297-337 31-69 (97)
90 2ytu_A Friend leukemia integra 20.0 54 0.0018 26.8 2.4 37 297-337 42-80 (128)
No 1
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=100.00 E-value=1.1e-85 Score=680.33 Aligned_cols=369 Identities=44% Similarity=0.812 Sum_probs=329.5
Q ss_pred CcccccCCCCcccccccCC---CCCCchHHHhhHHHHHHHHHHcCC-eEeccCCCcccCCccchhHHHHHHHHHHHHHHh
Q 035967 1 KLINVAVPGTIDERAINTK---RLLNPWERNENHTLCLNSAKAIGC-TVVNIGTQDFIEGRRHLVLGVISQIIKIQLLAD 76 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~---~~~~r~~~~eN~~~al~~~k~~gi-~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~ 76 (381)
||+|...||+||+|++|++ .+.+|+|++||++.||+++++.|| +++||+++||+||++++|||||||||++|++++
T Consensus 56 ~Lie~l~~~~i~~~~i~~~~~~~~~~~~~~~eNi~~~L~~~k~~g~~~l~~i~~~DI~dg~~~liLgLiW~li~~~~l~~ 135 (513)
T 1rt8_A 56 KLINDSVPDTIDERVLNKQRNNKPLDNFKCIENNNVVINSAKAMGGISITNIGAGDILEGREHLILGLVWQIIRRGLLGK 135 (513)
T ss_dssp HHHHHHSTTSSCGGGSCCCC---CCCHHHHHHHHHHHHHHHHHHSSCCCSSCCHHHHHTTCHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHcCCCcchhhcCCccccCcccHHHHHHHHHHHHHHHHHcCCCccCCcCHHhhhcCCHHHHHHHHHHHHHHhhhcc
Confidence 5789999999999999975 378999999999999999999999 999999999999999999999999999999999
Q ss_pred cccccCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCC
Q 035967 77 LNLKKTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAV 156 (381)
Q Consensus 77 i~~~~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~ 156 (381)
++++.+|++..+++++|+.+++.+.++++.||+|||++++++|+.++|+||++||+||++||+|+|++.|+.++++++.+
T Consensus 136 i~~~~~pel~~l~~~~e~~~~~~~~~~~~~LL~W~n~~l~~~g~~~~V~nFs~s~~DG~a~~aLl~~~~P~~i~~~~l~~ 215 (513)
T 1rt8_A 136 IDITLHPELYRLLEEDETLDQFLRLPPEKILLRWFNYHLKAANWPRTVSNFSKDVSDGENYTVLLNQLAPELCSRAPLQT 215 (513)
T ss_dssp C----------------CHHHHTTSCHHHHHHHHHHHHHHHTTCSCCCSCSSGGGTTSHHHHHHHHHHCTTTCCSGGGGC
T ss_pred cccccCHHHHhhhccCCchhhhhcCCHHHHHHHHHHHHHHhcCCCcCcccchhhhhccHHHHHHHHHHCccccccCCCCc
Confidence 99989999999998889998899999999999999999988888789999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhHHhhCCcccccccccccCCCchhHHHHHHHhhhH---------------------------------
Q 035967 157 KNPLQRAKLILEHADRMGCRRYLTAKDIVEGSPNLNLAFVAHIFQHR--------------------------------- 203 (381)
Q Consensus 157 ~d~~~na~~a~~~Ae~Lgi~~~L~peDI~~~~~k~il~~va~lf~~~--------------------------------- 203 (381)
++..+|++.||++|+++|||++|+||||+.++|+++|+|+++||+.+
T Consensus 216 ~~~~~n~~~a~~~a~~lgi~~~l~peDi~~~~~k~il~yva~l~~~~~~~~~~~~~~~~~~~~~~~e~~~q~k~f~~WiN 295 (513)
T 1rt8_A 216 TDVLQRAEQVLQNAEKLDCRKYLTPTAMVAGNPKLNLAFVAHLFNTHPGLEPLNEEEKPEIEPFDAEGEREARVFTLWLN 295 (513)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCSCCHHHHHTTCHHHHHHHHHHHHHHCCCCCC-------------CHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCccCCHHHhcCCCHHHHHHHHHHHHhhhcccCcccchhhhhhhhhcchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876
Q ss_pred ------------------HHHHHhhcccCCCcccccccCCCCC----CCchhhhhhHHHHHHHhhhcCeeeeecCCCccc
Q 035967 204 ------------------WVLLETLDKLSPGIVNWKIANKPPI----KLPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV 261 (381)
Q Consensus 204 ------------------~~ll~~~~ki~pg~v~w~~~~~~p~----~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI~ 261 (381)
.+|+++++++.||.++|++++++|. +++++++||||+|++++++.|+++|||+++||+
T Consensus 296 ~~~~~~~v~~l~~DL~DG~~L~~Lle~l~~g~v~~~~~~~~p~~~~~~~r~~~~eNv~~al~~~~~~gv~lv~i~~~DIv 375 (513)
T 1rt8_A 296 SLDVTPSIHDFFNNLRDGLILLQAYDKITPNTVNWKKVNKAPASGDEMMRFKAVENCNYAVDLGKNQGFSLVGIQGADIT 375 (513)
T ss_dssp HTTCSSCCSCHHHHTTTSHHHHHHHHHHSTTCCCGGGSCCCCTTSCCCCHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHH
T ss_pred hcCCCCCccCHHHHHhhHHHHHHHHHHhCCCCcchhhhcCCcccccccchHHHHHHHHHHHHHHHHcCceeeccchhhhh
Confidence 6899999999999999999998774 478999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCC
Q 035967 262 QGNKKLILALLWQMMRYNVLQLLKNLRFHSHGKEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQP 341 (381)
Q Consensus 262 dgn~kliLgLiW~li~~~~~~~~~~~~~~~~~~~~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P 341 (381)
|||+|+||||+|||||+|+++.+++++. +|+++++++||+|||++++.++++++|+||+|+||+||+|||||||+++|
T Consensus 376 dg~~~~~LgLlW~li~~~~~~~l~~l~~--~~~~~~~~~LL~W~~~~~~~~~~~~~i~nF~~~s~~dG~a~~aLi~~~~P 453 (513)
T 1rt8_A 376 DGSRTLTLALVWQMMRMNITKTLHSLSR--GGKTLSDSDMVAWANSMAAKGGKGSQIRSFRDPSISTGVFVLDVLHGIKS 453 (513)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTC--------CCCHHHHHHHHHHHHTTTCSSCCCSSTTCGGGGGSHHHHHHHHHHCG
T ss_pred cCCchhhHHHHHHHHHHHHHHHHHhhcc--CCCcCCHHHHHHHHHHHhhccCCCCCCCCCCcccccchHHHHHHHHHhCC
Confidence 9999999999999999999888766653 46788898999999999987667899999998899999999999999999
Q ss_pred CCcccccccCCCCccchhhhHHHhhhcccc
Q 035967 342 RAVNWSLVTKGVTGMFSSNHTRCAVTLIGN 371 (381)
Q Consensus 342 ~~id~~~~~~~~~~~~~~~n~~~a~~~a~~ 371 (381)
+++||+.+.++.+++++++|+++||++|++
T Consensus 454 ~~i~~~~l~~~~~~~~~~~n~~~af~~A~~ 483 (513)
T 1rt8_A 454 EYVDYNLVTDGSTEELAIQNARLAISIARK 483 (513)
T ss_dssp GGCCGGGCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHhhccccChhhHHHHHHHHHHHHHH
Confidence 999999998877788999999999999975
No 2
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=100.00 E-value=3e-84 Score=668.79 Aligned_cols=371 Identities=73% Similarity=1.161 Sum_probs=332.1
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
||+|.+.||+||++++|+++.+++|+++||++.||+++++.||++++|+++||+||+.+++|||+||||++|+++.++++
T Consensus 51 ~Lin~l~~~~i~~~~in~~~~~~~~~~~eNi~~~L~~~k~~g~~~~~i~~~Dl~dg~~~liLgLiw~li~~~~l~~i~~~ 130 (506)
T 1pxy_A 51 KLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQLLADLNLK 130 (506)
T ss_dssp HHHHHHSTTSSCGGGSCCCSSCCHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHHTCHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred HHHHHHcCCCCCccccCccccccHHHHHHHHHHHHHHHHHhCCCcCCCCHHHHhcCChHHHHHHHHHHHHHHHHHhhhhc
Confidence 58899999999999999886678999999999999999999999999999999999999999999999999999999998
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHH
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPL 160 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~ 160 (381)
.+|++.++.+++++++++.+.++++.|++|||+|++++|+.++|+||++||+||++||+|+|++.|+.++++.+.+++..
T Consensus 131 ~~p~l~~l~~~~e~~~~~~~~~~~~~LL~W~n~~l~~~g~~~~v~nFs~s~~DG~a~~~Ll~~~~P~~i~~~~l~~~~~~ 210 (506)
T 1pxy_A 131 KTPQLVELLEDSDDVEELLRLPPEKVLLKWMNFHLKKGGYKKTVSNFSADLKDAQAYAFLLNVLAPEHCDPATLDAKDPL 210 (506)
T ss_dssp C-----------------CCSCHHHHHHHHHHHHHHHTTCCSCCCCSSTTTTTSHHHHHHHHHHCGGGCCGGGGGCCSHH
T ss_pred cCHHHHHhhcCCcchhhhhcCCHHHHHHHHHHHHHHhcCCCccCccccccccchHHHHHHHHHhCccccccccCCcCCHH
Confidence 89999888888888888888999999999999999988887789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHhhCCcccccccccccCCCchhHHHHHHHhhhH-------------------------------------
Q 035967 161 QRAKLILEHADRMGCRRYLTAKDIVEGSPNLNLAFVAHIFQHR------------------------------------- 203 (381)
Q Consensus 161 ~na~~a~~~Ae~Lgi~~~L~peDI~~~~~k~il~~va~lf~~~------------------------------------- 203 (381)
+|++.||+.|+++|||++++||||+.++|+++|||+++||+.+
T Consensus 211 ~n~~~a~~~a~~lGi~~~l~peDi~~~~~k~v~tyva~l~~~~~~~~~~~~~~~~~~~~~~~~~~~q~ktf~~WiN~~~~ 290 (506)
T 1pxy_A 211 ERAELVLSHAERMNCKRYLTAEEIVEGSSTLNLAFVAQIFHERNGLNKDGKYAFAEMMTEDVETCRDERCYRLWINSLGI 290 (506)
T ss_dssp HHHHHHHHHHHHTTCCCCCCHHHHHTTCHHHHHHHHHHHHHHCCCCC-------------CCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHcCCCCcCCHHHHhcCChhHHHHHHHHHhhhcCCCCCccccchhhhhhhhhHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999887
Q ss_pred --------------HHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCcccCCcchhHH
Q 035967 204 --------------WVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDIVQGNKKLIL 269 (381)
Q Consensus 204 --------------~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI~dgn~kliL 269 (381)
.+|+++++++.||.++|++++++|.++++|++||||+|++++++.|++++||+++||+|||.|+||
T Consensus 291 ~~~v~dl~~Dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~r~~~leNv~~aL~~~k~~~v~l~~I~~~dIvdg~~kl~L 370 (506)
T 1pxy_A 291 DSYVNNVFEDVRNGWILLEVLDKVSPSSVNWKHASKPPIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDIVQGNKKLIL 370 (506)
T ss_dssp SSCCSCHHHHTTTSHHHHHHHHHHSTTCCCGGGCCCSSCCCHHHHHHHHHHHHHHHHHTTCCCCSCCHHHHHTTCHHHHH
T ss_pred CCCcccHHHHHHhHHHHHHHHHHHcCCccccccccCCccccHHHHHHHHHHHHHHHHHcCCcccCCCHHHHhcCCHHHHH
Confidence 689999999999999999999988778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccc
Q 035967 270 ALLWQMMRYNVLQLLKNLRFHSHGKEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLV 349 (381)
Q Consensus 270 gLiW~li~~~~~~~~~~~~~~~~~~~~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~ 349 (381)
||+|||||||+.+++..++.++.|+.++++.||+|||++++++|++++|+||+|+||+||+|||||+|+++|+++||+.+
T Consensus 371 ~Liw~lir~~i~~~~~~l~~~~~~~~~~~~~LL~W~~~~~~~~~~~~~i~nF~d~s~~dG~a~~aLi~~~~P~li~~~~l 450 (506)
T 1pxy_A 371 GLLWQLMRFHMLQLLKSLRSRTLGKEMTDADILSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLV 450 (506)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-----CCCHHHHHHHHHHHHHTTTCCCCCSSTTCGGGGGCHHHHHHHHHHCGGGCCTTSC
T ss_pred HHHHHHHHHhhHHHHHHhhcccccccccHHHHHHHHHHHhhhcCCccccCCCCcccccchHHHHHHHHhhCCCeeehhhc
Confidence 99999999999888766665445777888899999999999876678999999889999999999999999999999999
Q ss_pred cCCCCccchhhhHHHhhhcccc
Q 035967 350 TKGVTGMFSSNHTRCAVTLIGN 371 (381)
Q Consensus 350 ~~~~~~~~~~~n~~~a~~~a~~ 371 (381)
.++.+++++.+|+++||++|++
T Consensus 451 ~~~~s~~~~~~N~~~a~~~a~~ 472 (506)
T 1pxy_A 451 TKGETDDEKRLNATYIVSVARK 472 (506)
T ss_dssp CCSCSHHHHHHHHHHHHHHHHH
T ss_pred ccCCCchhHHHHHHHHHHHHHH
Confidence 9877778899999999999964
No 3
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=100.00 E-value=2.8e-47 Score=364.44 Aligned_cols=199 Identities=53% Similarity=0.906 Sum_probs=182.6
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
+|+|.+.||+|+||++|++ ++++||++||++.||+++++.||+++||+++||+||++++|||||||||++|++.+|++.
T Consensus 68 ~Lle~l~~~~v~~~~i~~~-~~~~~~~~eNv~~aL~~~k~~g~~l~~I~~~DIvdg~~~liLgLlw~li~~~~~~~I~~~ 146 (275)
T 1aoa_A 68 KMINLSVPDTIDERAINKK-KLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELS 146 (275)
T ss_dssp HHHHHHSTTSSCGGGSCCS-SCCHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHhcCCCCCccccCCC-CCCHHHHHHHHHHHHHHHHHcCCcccCCCHHHHHcCcHHHHHHHHHHHHHHhhhcccccc
Confidence 4789999999999999975 788999999999999999999999999999999999999999999999999999999998
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCC---------CCCC
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPE---------HSNP 151 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~---------~~~~ 151 (381)
.+|++.++++++++.+++.+.++++.||+|||++++++|+.. |+||++||+||++||+|+|+++|+ .+++
T Consensus 147 ~~~~l~~ll~~ge~~~~~~~~s~~~~LL~W~n~~l~~~g~~~-I~nF~~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~ 225 (275)
T 1aoa_A 147 RNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQK-INNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINM 225 (275)
T ss_dssp CTTCC--------CHHHHHTSCHHHHHHHHHHHHHHHTTCCC-CSCSSTTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCC
T ss_pred cChHHHHhhccCCchhhhhccCHHHHHHHHHHHHHHhcCCCc-chhhhhhhhhhHHHHHHHHHHCCCccccccccccccc
Confidence 899998888888888888889999999999999999888765 999999999999999999999999 7788
Q ss_pred CcCCCCCHHHHHHHHHHhHHhhCCcccccccccccCCCchhHHHHHHHhh
Q 035967 152 STLAVKNPLQRAKLILEHADRMGCRRYLTAKDIVEGSPNLNLAFVAHIFQ 201 (381)
Q Consensus 152 ~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~peDI~~~~~k~il~~va~lf~ 201 (381)
+.+.+++..+|+++||++|+++|||++++||||++++++++|||+++||+
T Consensus 226 ~~~~~~~~~~n~~~a~~~A~~lGi~~~l~peDi~~~~~k~i~tyva~Lfn 275 (275)
T 1aoa_A 226 SGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANLFN 275 (275)
T ss_dssp TTTTCSSHHHHHHHHHHHHTTTTCCCSCCHHHHHTTCHHHHHHHHHHHHC
T ss_pred cCCCccCHHHHHHHHHHHHHHcCCCCcCCHHHcCCCChhHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999996
No 4
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=100.00 E-value=4.5e-43 Score=333.63 Aligned_cols=185 Identities=22% Similarity=0.340 Sum_probs=160.0
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
+|+|...|+++ ++++|++ |.+|+|++|||+.||+|+++.||+++||+++||+||++++|||||||||++|+++.+...
T Consensus 82 ~Lle~Ls~~~l-~~~~~~~-p~~r~~kleNv~~aL~~lk~~gv~lvnI~~~DIvdGn~kliLgLlW~Li~~~~i~~l~~~ 159 (272)
T 3hoc_A 82 ALLEVLSQKKM-HRKHNQR-PTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWD 159 (272)
T ss_dssp HHHHHHHTSCC-SSCCCSS-CCSHHHHHHHHHHHHHHHHHTTCCCSSCCHHHHHTTCHHHHHHHHHHHHHHHHTTCC---
T ss_pred HHHHHHcCCcc-ccccCCC-CccHHHHHHHHHHHHHHHHHcCCcccccccchhhcCCHHHHHHHHHHHHHHHhhhhhhcc
Confidence 47888899999 8899986 789999999999999999999999999999999999999999999999999998764321
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCC-CCCcCCCCCH
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHS-NPSTLAVKNP 159 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~-~~~~~~~~d~ 159 (381)
+++..+..+.++++.||+|||++++ ..+|+||++||+||++||+|+|+++|+.+ +++.+.+++.
T Consensus 160 -----------~e~~~~~~~~s~k~~LL~W~n~~~~----~~~I~nFs~sw~DG~af~aLi~~~~P~li~d~~~l~~~~~ 224 (272)
T 3hoc_A 160 -----------EEEDEEAKKQTPKQRLLGWIQNKLP----QLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKP 224 (272)
T ss_dssp --------------------CCHHHHHHHHHHHHCT----TSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCH
T ss_pred -----------ccccccccccCHHHHHHHHHHhhCC----CCCCCChhhcccchHHHHHHHHHhCcccccchhhcCccCH
Confidence 2222233456899999999999874 24899999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHhHHh-hCCcccccccccccC--CCchhHHHHHHHhhh
Q 035967 160 LQRAKLILEHADR-MGCRRYLTAKDIVEG--SPNLNLAFVAHIFQH 202 (381)
Q Consensus 160 ~~na~~a~~~Ae~-Lgi~~~L~peDI~~~--~~k~il~~va~lf~~ 202 (381)
.+|+++||++|++ +|||++|+||||+.+ +++++|||+++||+.
T Consensus 225 ~~n~~~Af~~Ae~~lGi~~ll~peDiv~~~pD~ksimtYvs~~~~a 270 (272)
T 3hoc_A 225 VTNAREAMQQADDWLGIPQVITPEEIVDPNVDKHSVMTYLSQFPKA 270 (272)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCHHHHTCTTCCHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHHHhCCCCccCCHHHhccCCCChHHHHHHHHHhhcc
Confidence 9999999999998 999999999999984 558999999999974
No 5
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=100.00 E-value=1.3e-42 Score=326.86 Aligned_cols=185 Identities=18% Similarity=0.311 Sum_probs=163.4
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
+|+|...|+++ ++++|++ |.+|+|++||++.||+|+++.||+++||+++||+||++++|||||||||++|+++.+..
T Consensus 55 ~Lle~L~~~~~-~~~~n~~-~~~~~~~~eNv~~aL~~~k~~g~~lv~I~~~DIvdG~~kliLgLlW~li~~~~i~~~~~- 131 (245)
T 2wa7_A 55 ALLEVLSQKRM-YRKYHQR-PTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVW- 131 (245)
T ss_dssp HHHHHHHTCCC-SSCCCSS-CCSHHHHHHHHHHHHHHHHHTTCCCCSCCHHHHHTTCHHHHHHHHHHHHHHHHTTSSCC-
T ss_pred HHHHHHcCCCC-chhcCCC-CCcHHHHHHHHHHHHHHHHHcCCcccCCCHHHhhCCCHHHHHHHHHHHHHHHccccccc-
Confidence 47888999998 5899976 68999999999999999999999999999999999999999999999999999875432
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCC-CCCcCCCCCH
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHS-NPSTLAVKNP 159 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~-~~~~~~~~d~ 159 (381)
++++.++..+.++++.||+|||.+++ + .+|+||++||+||++||+|+|+++|+.+ +++.+++++.
T Consensus 132 ----------~~~~~~~~~~~~~~~~LL~W~~~~~~--~--~~v~nFs~s~~dG~a~~aLi~~~~P~~i~~~~~l~~~~~ 197 (245)
T 2wa7_A 132 ----------EDEGDDDAKKQTPKQRLLGWIQNKIP--Y--LPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKP 197 (245)
T ss_dssp ----------SSCC----CCCCHHHHHHHHHHHHST--T--SCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCH
T ss_pred ----------ccccccccccccHHHHHHHHHHHhCC--C--CCCCCCcccchhhHHHHHHHHHHCccccccccccCcccH
Confidence 12222234456899999999999975 2 4799999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHhHHh-hCCcccccccccccCCC--chhHHHHHHHhhh
Q 035967 160 LQRAKLILEHADR-MGCRRYLTAKDIVEGSP--NLNLAFVAHIFQH 202 (381)
Q Consensus 160 ~~na~~a~~~Ae~-Lgi~~~L~peDI~~~~~--k~il~~va~lf~~ 202 (381)
.+|+++||++|++ +|||++++||||+.++| +++|||+++||+.
T Consensus 198 ~~n~~~a~~~A~~~lGi~~~l~peDi~~~~~d~ksi~tyvs~~~~~ 243 (245)
T 2wa7_A 198 VDNAREAVQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQFPKA 243 (245)
T ss_dssp HHHHHHHHHHHHHHSCCCCSSCHHHHTCTTCCHHHHHHHHTHHHHC
T ss_pred HHHHHHHHHHHHHhCCCCccCCHHHhccCCCcHHHHHHHHHHHhcc
Confidence 9999999999998 99999999999999544 7899999999985
No 6
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=100.00 E-value=7e-41 Score=321.68 Aligned_cols=187 Identities=22% Similarity=0.394 Sum_probs=162.9
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTA 181 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~p 181 (381)
.+++++++|+|.++.+.+. .|+|+.+|++||+.||.|++.+.|+.++..
T Consensus 73 vQkktft~WINs~L~~~~~--~V~dL~~DL~DGvvL~~Lle~L~~~~l~~~----------------------------- 121 (296)
T 3f7p_A 73 VQKKTFTKWVNKHLIKAQR--HISDLYEDLRDGHNLISLLEVLSGDSLPRE----------------------------- 121 (296)
T ss_dssp HHHHHHHHHHHHHHGGGTC--CCSCTTTTTTTSHHHHHHHHHHHCCCCCCC-----------------------------
T ss_pred HHHHHHHHHHHHHcccCCC--CcccHHHHHhhHHHHHHHHHHhcCCccccc-----------------------------
Confidence 4789999999999986543 699999999999999999999998876420
Q ss_pred cccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCccc
Q 035967 182 KDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV 261 (381)
Q Consensus 182 eDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI~ 261 (381)
++ ++++|++||||+|++++++.|++++||+++||+
T Consensus 122 --------------------------------------------~~-~~r~~kleNvn~aL~~lk~~gv~lv~I~~~DIv 156 (296)
T 3f7p_A 122 --------------------------------------------KG-RMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIA 156 (296)
T ss_dssp --------------------------------------------CC-SSHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHH
T ss_pred --------------------------------------------CC-cChhhhhhhHHHHHHHHHHhCccccCCChhhhh
Confidence 12 579999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHH-HHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhC
Q 035967 262 QGNKKLILALLWQMMRYNVLQLLKNLRFHSHGKEITDAD-ILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQ 340 (381)
Q Consensus 262 dgn~kliLgLiW~li~~~~~~~~~~~~~~~~~~~~~~~~-lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~ 340 (381)
|||.|+||||+||||++|+++.+...+ .++++++++ ||+|||+++++| ++++|+||+ +||+||++||||||+++
T Consensus 157 dGn~kliLgLlW~Li~~~~i~~i~~~g---~~~~~s~k~~LL~W~n~~~~~y-~~v~I~nFs-~sw~DG~af~aLI~~~~ 231 (296)
T 3f7p_A 157 DGNPKLTLGLIWTIILHFQISDIQVSG---QSEDMTAKEKLLLWSQRMVEGY-QGLRCDNFT-SSWRDGRLFNAIIHRHK 231 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTTCCCSS---CCTTSCHHHHHHHHHHHHTTTS-TTCCCCCSS-GGGTTSHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHhhcccceeeeeccC---CcccCCHHHHHHHHHHHHhcCC-CCCcCCCcc-ccccccHHHHHHHHHHC
Confidence 999999999999999988876653221 245677665 999999999988 478999999 99999999999999999
Q ss_pred CCCcccccccCCCCccchhhhHHHhhhcccccc
Q 035967 341 PRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNSS 373 (381)
Q Consensus 341 P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~~ 373 (381)
|++|||+.+.+. ++.+|+++||++||+..
T Consensus 232 P~lid~~~l~~~----~~~~N~~~Af~~Ae~~L 260 (296)
T 3f7p_A 232 PLLIDMNKVYRQ----TNLENLDQAFSVAERDL 260 (296)
T ss_dssp GGGCCHHHHTTS----CHHHHHHHHHHHHHHHH
T ss_pred cCccCHHHcCcc----cHHHHHHHHHHHHHHhC
Confidence 999999998764 78899999999998643
No 7
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=100.00 E-value=4.3e-41 Score=317.98 Aligned_cols=178 Identities=22% Similarity=0.371 Sum_probs=160.4
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
+|+|.+.|++|+. ++ .+.+|||++||++.||+|+++.||+++||+++||+||++++||||+||||++|+++.++.+
T Consensus 62 ~Lle~l~~~~v~k--~~--~~~~~~~~~eNi~~aL~~~k~~gv~lv~I~~~DIvdG~~kliLgLlW~li~~~~i~~i~~~ 137 (254)
T 1wku_A 62 LLLEVISGERLPR--PD--KGKMRFHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVE 137 (254)
T ss_dssp HHHHHHHCSCCCC--CC--SCCSHHHHHHHHHHHHHHHHTTTCCCCSCCHHHHHHCCHHHHHHHHHHHHHHHHTTTCEET
T ss_pred HHHHHhCcCCCCC--CC--CCccHHHHHHhHHHHHHHHHHcCCCccCCCHHHHhccchHHHHHHHHHHHHHHhhcccccc
Confidence 4788999999974 44 3589999999999999999999999999999999999999999999999999999887531
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCc-cccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCH
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYK-KIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNP 159 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~-~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~ 159 (381)
+.++++.||+|||.++. |++ .+|+||++||+||.+||+|+|+++|+.+|++.+.+++.
T Consensus 138 -------------------~~~~~~~LL~W~~~~~~--~y~~v~v~nFs~s~~DG~a~~aLi~~~~P~~id~~~l~~~~~ 196 (254)
T 1wku_A 138 -------------------ETSAKEGLLLWCQRKTA--PYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDP 196 (254)
T ss_dssp -------------------TEEHHHHHHHHHHHHHT--TCTTCCCCSSSGGGTTSHHHHHHHHHHCTTSCCGGGCCTTCH
T ss_pred -------------------cccHHHHHHHHHHHHcc--CCCCCcCCCCccchhhHHHHHHHHHHHCCCcccccccCcCCH
Confidence 13688999999999886 443 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHh-hCCcccccccccccC-CC--chhHHHHHHHhhhH
Q 035967 160 LQRAKLILEHADR-MGCRRYLTAKDIVEG-SP--NLNLAFVAHIFQHR 203 (381)
Q Consensus 160 ~~na~~a~~~Ae~-Lgi~~~L~peDI~~~-~~--k~il~~va~lf~~~ 203 (381)
.+|+++||++|++ +|||++++|||++.+ .| +++|||+++||+.+
T Consensus 197 ~~n~~~a~~~A~~~lGi~~~l~peDiv~~~~pD~k~imtyva~l~~~~ 244 (254)
T 1wku_A 197 IGNLNTAFEVAEKYLDIPKMLDAEDIVNTPKPDEKAIMTYVSCFYHAF 244 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCCCSCHHHHHHSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCCHHHHhccCCCcHHHHHHHHHHHHHHh
Confidence 9999999999997 999999999999764 34 89999999999864
No 8
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=100.00 E-value=1.9e-40 Score=315.56 Aligned_cols=189 Identities=24% Similarity=0.377 Sum_probs=157.1
Q ss_pred CChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCccccc
Q 035967 101 LPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLT 180 (381)
Q Consensus 101 ~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~ 180 (381)
..+++++++|+|.|+.+.+ ..|+|+.+|++||+.|+.|++.+.|..+
T Consensus 46 ~vQkktft~WiN~~L~~~~--~~V~dL~~DL~DGv~L~~Lle~Ls~~~l------------------------------- 92 (272)
T 3hoc_A 46 KIQQNTFTRWCNEHLKCVS--KRIANLQTDLSDGLRLIALLEVLSQKKM------------------------------- 92 (272)
T ss_dssp GHHHHHHHHHHHHHHGGGT--CCCSCTTTTTTTSHHHHHHHHHHHTSCC-------------------------------
T ss_pred HHHHHHHHHHHHHHhccCC--CCcccHHHHHhhHHHHHHHHHHHcCCcc-------------------------------
Confidence 3578899999999998664 3799999999999999999999987653
Q ss_pred ccccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCcc
Q 035967 181 AKDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDI 260 (381)
Q Consensus 181 peDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI 260 (381)
|.+++++| ++++|++|||++|++++++.|+++|||+++||
T Consensus 93 ---------------------------------------~~~~~~~p-~~r~~kleNv~~aL~~lk~~gv~lvnI~~~DI 132 (272)
T 3hoc_A 93 ---------------------------------------HRKHNQRP-TFRQMQLENVSVALEFLDRESIKLVSIDSKAI 132 (272)
T ss_dssp ---------------------------------------SSCCCSSC-CSHHHHHHHHHHHHHHHHHTTCCCSSCCHHHH
T ss_pred ---------------------------------------ccccCCCC-ccHHHHHHHHHHHHHHHHHcCCcccccccchh
Confidence 34456656 56899999999999999999999999999999
Q ss_pred cCCcchhHHHHHHHHHHHHHHHhhhhccc-cCCCCCCCH-HHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHh
Q 035967 261 VQGNKKLILALLWQMMRYNVLQLLKNLRF-HSHGKEITD-ADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSA 338 (381)
Q Consensus 261 ~dgn~kliLgLiW~li~~~~~~~~~~~~~-~~~~~~~~~-~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~ 338 (381)
+|||.|+||||+||||++|+++.+...+. ..++...+. +.||+|||++++ +++|+||+ +||+||++||||||+
T Consensus 133 vdGn~kliLgLlW~Li~~~~i~~l~~~~e~~~~~~~~s~k~~LL~W~n~~~~----~~~I~nFs-~sw~DG~af~aLi~~ 207 (272)
T 3hoc_A 133 VDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNKLP----QLPITNFS-RDWQSGRALGALVDS 207 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCC------------CCHHHHHHHHHHHHCT----TSCCCCSS-GGGTTSHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHhhhhhhccccccccccccCHHHHHHHHHHhhCC----CCCCCChh-hcccchHHHHHHHHH
Confidence 99999999999999999888765421110 012334554 459999999864 47899999 799999999999999
Q ss_pred hCCCCc-ccccccCCCCccchhhhHHHhhhcccc
Q 035967 339 VQPRAV-NWSLVTKGVTGMFSSNHTRCAVTLIGN 371 (381)
Q Consensus 339 ~~P~~i-d~~~~~~~~~~~~~~~n~~~a~~~a~~ 371 (381)
++|++| ||+.+.+ +++++|+++||++|++
T Consensus 208 ~~P~li~d~~~l~~----~~~~~n~~~Af~~Ae~ 237 (272)
T 3hoc_A 208 CAPGLCPDWDSWDA----SKPVTNAREAMQQADD 237 (272)
T ss_dssp HSTTSSTTGGGSCT----TCHHHHHHHHHHHHHH
T ss_pred hCcccccchhhcCc----cCHHHHHHHHHHHHHH
Confidence 999999 8998764 4889999999999998
No 9
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=323.41 Aligned_cols=182 Identities=19% Similarity=0.322 Sum_probs=161.7
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
+|+|.+.|++++. + ++.+|+|++|||+.||+|+++.||+++||+++||+||++++|||||||||++|+++.++..
T Consensus 108 ~Lle~L~~~~l~~---~--~~~~r~~kleNvn~aL~~lk~~gv~lv~I~~~DIvdGn~kliLgLlW~Li~~~~i~~i~~~ 182 (296)
T 3f7p_A 108 SLLEVLSGDSLPR---E--KGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQVS 182 (296)
T ss_dssp HHHHHHHCCCCCC---C--CCSSHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHTTCHHHHHHHHHHHHHHHTTTTCCCS
T ss_pred HHHHHhcCCcccc---c--CCcChhhhhhhHHHHHHHHHHhCccccCCChhhhhccchHHHHHHHHHhhcccceeeeecc
Confidence 4788889999875 2 3679999999999999999999999999999999999999999999999999999887643
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHH
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPL 160 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~ 160 (381)
.. ++ +.++++.||+|||.+++.+ ...+|+||++||+||++||+|||+++|+.+|++.+.+.+..
T Consensus 183 g~---------~~------~~s~k~~LL~W~n~~~~~y-~~v~I~nFs~sw~DG~af~aLI~~~~P~lid~~~l~~~~~~ 246 (296)
T 3f7p_A 183 GQ---------SE------DMTAKEKLLLWSQRMVEGY-QGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNL 246 (296)
T ss_dssp SC---------CT------TSCHHHHHHHHHHHHTTTS-TTCCCCCSSGGGTTSHHHHHHHHHHCGGGCCHHHHTTSCHH
T ss_pred CC---------cc------cCCHHHHHHHHHHHHhcCC-CCCcCCCccccccccHHHHHHHHHHCcCccCHHHcCcccHH
Confidence 21 11 3478999999999999743 13589999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHH-hhCCcccccccccccCCC--chhHHHHHHHhhhH
Q 035967 161 QRAKLILEHAD-RMGCRRYLTAKDIVEGSP--NLNLAFVAHIFQHR 203 (381)
Q Consensus 161 ~na~~a~~~Ae-~Lgi~~~L~peDI~~~~~--k~il~~va~lf~~~ 203 (381)
+|+++||++|+ ++|||++|+||||+.+.| +++||||++||+.+
T Consensus 247 ~N~~~Af~~Ae~~LGi~~ll~pEDi~~~~pDeksimtyvs~ly~~f 292 (296)
T 3f7p_A 247 ENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLYDAM 292 (296)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCHHHHSSSSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCccCCHHHhcCCCCcHHHHHHHHHHHHHHC
Confidence 99999999997 599999999999988655 78999999999863
No 10
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=100.00 E-value=9.4e-41 Score=328.59 Aligned_cols=185 Identities=17% Similarity=0.314 Sum_probs=160.3
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
+|++.+.+++++.+ ++++ |.+|+|++||++.||+|+++.||+++||+++||+|||+++|||||||||++|+++.+..
T Consensus 52 ~Lle~ls~~~l~~~-~~~~-p~~r~~k~eNv~~al~~~~~~g~~lv~i~~~DIvdGn~~liLgLiW~li~~~~i~~~~~- 128 (347)
T 4b7l_A 52 ALLEVLSQKRMYRK-YHQR-PTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVW- 128 (347)
T ss_dssp HHHHHHHTCCCSSC-CCSS-CCSHHHHHHHHHHHHHHHHHTTCCCSSCCHHHHHTTCHHHHHHHHHHHHHHHHTTSSCC-
T ss_pred HHHHHHcCCccChh-hcCC-cccHHHHHHHHHHHHHHHHHhccccCCCCcchhhcCCHhhHHHHHHHHHHHHhhhhhhc-
Confidence 36777888888654 4444 68999999999999999999999999999999999999999999999999999875432
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCC-CCCcCCCCCH
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHS-NPSTLAVKNP 159 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~-~~~~~~~~d~ 159 (381)
+++...+..+.++++.||+|||.++. ...|+||++||+||++||+|+|+++|+.+ +++.+++++.
T Consensus 129 ----------~~~~~~~~~~~~~k~~LL~W~~~~~~----~~~v~nF~~sw~DG~af~aLi~~~~P~~~~d~~~l~~~~~ 194 (347)
T 4b7l_A 129 ----------EDEGDDDAKKQTPKQRLLGWIQNKIP----YLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKP 194 (347)
T ss_dssp ----------C-------CCCCHHHHHHHHHHHHCT----TSCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCH
T ss_pred ----------ccccchhhhhhhHHHHHHHHHHhhCC----CcccCCCCCCccchHHHHHHHHHhCCccccchhhcCcCCH
Confidence 22333334456899999999999874 24799999999999999999999999998 8999999999
Q ss_pred HHHHHHHHHhHHh-hCCcccccccccccCCC--chhHHHHHHHhhh
Q 035967 160 LQRAKLILEHADR-MGCRRYLTAKDIVEGSP--NLNLAFVAHIFQH 202 (381)
Q Consensus 160 ~~na~~a~~~Ae~-Lgi~~~L~peDI~~~~~--k~il~~va~lf~~ 202 (381)
.+|+++||++|++ ||||++|+||||+.+.| +++|||+|+||+.
T Consensus 195 ~~n~~~Af~~Ae~~lGip~ll~peDi~~~~pDeksimtYvs~~~~~ 240 (347)
T 4b7l_A 195 VDNAREAMQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQFPKA 240 (347)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCHHHHTCTTCCHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHhcCCCcccCHHHcCCCCCChhHHHHHHHHHhhh
Confidence 9999999999997 99999999999998766 7899999999985
No 11
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=100.00 E-value=3.4e-40 Score=324.59 Aligned_cols=189 Identities=23% Similarity=0.368 Sum_probs=158.2
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTA 181 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~p 181 (381)
.+++++++|+|.||.+.+. .|+|+.+|++||+.|+.|++.+.++.++
T Consensus 17 iQ~ktFt~WiN~~L~~~~~--~V~dL~~Dl~DG~~L~~Lle~ls~~~l~------------------------------- 63 (347)
T 4b7l_A 17 IQQNTFTRWCNEHLKSVNK--RIGNLQTDLSDGLRLIALLEVLSQKRMY------------------------------- 63 (347)
T ss_dssp HHHHHHHHHHHHHHGGGTC--CCSCTTTTTTTSHHHHHHHHHHHTCCCS-------------------------------
T ss_pred HHHHHHHHHHHHhhCcCCC--CcCCHHHHhcCHHHHHHHHHHHcCCccC-------------------------------
Confidence 4789999999999987654 6999999999999999999999887653
Q ss_pred cccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCccc
Q 035967 182 KDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV 261 (381)
Q Consensus 182 eDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI~ 261 (381)
+++++.| ++++|++|||++|++++++.|++++||+++||+
T Consensus 64 ---------------------------------------~~~~~~p-~~r~~k~eNv~~al~~~~~~g~~lv~i~~~DIv 103 (347)
T 4b7l_A 64 ---------------------------------------RKYHQRP-TFRQMQLENVSVALEFLDRESIKLVSIDSKAIV 103 (347)
T ss_dssp ---------------------------------------SCCCSSC-CSHHHHHHHHHHHHHHHHHTTCCCSSCCHHHHH
T ss_pred ---------------------------------------hhhcCCc-ccHHHHHHHHHHHHHHHHHhccccCCCCcchhh
Confidence 1234445 579999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhhhccc-cCCCCCCC-HHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhh
Q 035967 262 QGNKKLILALLWQMMRYNVLQLLKNLRF-HSHGKEIT-DADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAV 339 (381)
Q Consensus 262 dgn~kliLgLiW~li~~~~~~~~~~~~~-~~~~~~~~-~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~ 339 (381)
|||.++||||+||||++|+++.+..... ...+...+ ++.||+|||+++++ ++|+||+ +||+||+|||||||++
T Consensus 104 dGn~~liLgLiW~li~~~~i~~~~~~~~~~~~~~~~~~k~~LL~W~~~~~~~----~~v~nF~-~sw~DG~af~aLi~~~ 178 (347)
T 4b7l_A 104 DGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKIPY----LPITNFN-QNWQDGKALGALVDSC 178 (347)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTSSCCC-------CCCCHHHHHHHHHHHHCTT----SCCCCSS-GGGTTSHHHHHHHHHH
T ss_pred cCCHhhHHHHHHHHHHHHhhhhhhcccccchhhhhhhHHHHHHHHHHhhCCC----cccCCCC-CCccchHHHHHHHHHh
Confidence 9999999999999999988765321111 01123344 45599999998754 5799999 9999999999999999
Q ss_pred CCCCc-ccccccCCCCccchhhhHHHhhhccccc
Q 035967 340 QPRAV-NWSLVTKGVTGMFSSNHTRCAVTLIGNS 372 (381)
Q Consensus 340 ~P~~i-d~~~~~~~~~~~~~~~n~~~a~~~a~~~ 372 (381)
+|+++ ||+.+.+. ++++|+++||++|++.
T Consensus 179 ~P~~~~d~~~l~~~----~~~~n~~~Af~~Ae~~ 208 (347)
T 4b7l_A 179 APGLCPDWESWDPQ----KPVDNAREAMQQADDW 208 (347)
T ss_dssp STTSSTTGGGSCTT----CHHHHHHHHHHHHHHH
T ss_pred CCccccchhhcCcC----CHHHHHHHHHHHHHHh
Confidence 99999 89988654 8899999999999985
No 12
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=100.00 E-value=1.1e-40 Score=313.75 Aligned_cols=181 Identities=19% Similarity=0.346 Sum_probs=161.3
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
+|+|.+.|++++ + .++.+|+|++||++.||+++++.||+++||+++||+||++++|||||||||++|+++.++..
T Consensus 52 ~Lle~l~~~~~~-~----~~~~~~~~~~eNv~~aL~~~k~~g~~l~~I~~~DIvdg~~k~iLgLlw~li~~~~i~~i~~~ 126 (245)
T 1sh5_A 52 SLLEVLSGDSLP-R----EKGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQVS 126 (245)
T ss_dssp HHHHHHHCCCCC-C----CCCCSHHHHHHHHHHHHHHHHHTTCCCCSCCHHHHHTTCHHHHHHHHHHHHHHHTTTTCCCT
T ss_pred HHHHHhcCcccc-C----CCCcchHHHHHhHHHHHHHHHHcCCcccCCChHhhhcccHHHHHHHHHHHHHhhcccccccc
Confidence 478888899986 2 23679999999999999999999999999999999999999999999999999999887653
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHH
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPL 160 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~ 160 (381)
+. ++ +.++++.||+|||.+++.+. ..+|+||++||+||.+||+|+|+++|+.+|++.+.+.+..
T Consensus 127 g~---------~~------~~~~~~~LL~W~~~~~~~~~-~~~v~nF~~s~~DG~a~~aLi~~~~P~~i~~~~l~~~~~~ 190 (245)
T 1sh5_A 127 GQ---------SE------DMTAKEKLLLWSQRMVEGYQ-GLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVYRQTNL 190 (245)
T ss_dssp TC---------CS------SCCHHHHHHHHHHHHTTTST-TCCCCCSSGGGTTSHHHHHHHHTTCTTTCCHHHHHHSCHH
T ss_pred cc---------cc------cCCHHHHHHHHHHHHhccCC-CcccCCccccccchHHHHHHHHHHCCCCCCHHHcccCCHH
Confidence 21 11 34789999999999998542 3589999999999999999999999999999988889999
Q ss_pred HHHHHHHHhHHh-hCCcccccccccccCCC--chhHHHHHHHhhh
Q 035967 161 QRAKLILEHADR-MGCRRYLTAKDIVEGSP--NLNLAFVAHIFQH 202 (381)
Q Consensus 161 ~na~~a~~~Ae~-Lgi~~~L~peDI~~~~~--k~il~~va~lf~~ 202 (381)
+|+++||++|++ +|||++++||||+.++| +++|||+++||+.
T Consensus 191 ~n~~~a~~~a~~~lGi~~~l~peDi~~~~pd~k~i~tyva~l~~~ 235 (245)
T 1sh5_A 191 ENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLYDA 235 (245)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCHHHHSSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCccCCHHHhccCCCcHHHHHHHHHHHHHH
Confidence 999999999996 99999999999987654 8999999999986
No 13
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=100.00 E-value=1.3e-39 Score=306.47 Aligned_cols=189 Identities=24% Similarity=0.385 Sum_probs=158.5
Q ss_pred CChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCccccc
Q 035967 101 LPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLT 180 (381)
Q Consensus 101 ~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~ 180 (381)
..+++++++|+|.++.+.+ ..|.|+.+|++||+.||.|++.+.|+.+
T Consensus 19 ~~q~~~f~~WiN~~L~~~~--~~v~dl~~dL~DGv~L~~Lle~L~~~~~------------------------------- 65 (245)
T 2wa7_A 19 KIQQNTFTRWCNEHLKCVN--KRIGNLQTDLSDGLRLIALLEVLSQKRM------------------------------- 65 (245)
T ss_dssp GHHHHHHHHHHHHHHGGGT--CCCSCTTTTTTTSHHHHHHHHHHHTCCC-------------------------------
T ss_pred HHHHHHHHHHHHHhccccC--CCccCHHHHcccHHHHHHHHHHHcCCCC-------------------------------
Confidence 3578999999999997654 3799999999999999999999988754
Q ss_pred ccccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCcc
Q 035967 181 AKDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDI 260 (381)
Q Consensus 181 peDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI 260 (381)
|++++++| ++++|++||||+|++++++.|+++|||+++||
T Consensus 66 ---------------------------------------~~~~n~~~-~~~~~~~eNv~~aL~~~k~~g~~lv~I~~~DI 105 (245)
T 2wa7_A 66 ---------------------------------------YRKYHQRP-TFRQMQLENVSVALEFLDRESIKLVSIDSKAI 105 (245)
T ss_dssp ---------------------------------------SSCCCSSC-CSHHHHHHHHHHHHHHHHHTTCCCCSCCHHHH
T ss_pred ---------------------------------------chhcCCCC-CcHHHHHHHHHHHHHHHHHcCCcccCCCHHHh
Confidence 23456656 56899999999999999999999999999999
Q ss_pred cCCcchhHHHHHHHHHHHHHHHhhhhccc-cCCCCCCCH-HHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHh
Q 035967 261 VQGNKKLILALLWQMMRYNVLQLLKNLRF-HSHGKEITD-ADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSA 338 (381)
Q Consensus 261 ~dgn~kliLgLiW~li~~~~~~~~~~~~~-~~~~~~~~~-~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~ 338 (381)
+|||.|+||||+||||++|+++.+..-+. ..++...+. +.||+|||+++++ ++|+||+ +||+||+|||||+|+
T Consensus 106 vdG~~kliLgLlW~li~~~~i~~~~~~~~~~~~~~~~~~~~~LL~W~~~~~~~----~~v~nFs-~s~~dG~a~~aLi~~ 180 (245)
T 2wa7_A 106 VDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKIPY----LPITNFN-QNWQDGKALGALVDS 180 (245)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTSSCCSSCC----CCCCHHHHHHHHHHHHSTT----SCCCCSS-GGGTTSHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHhCCC----CCCCCCc-ccchhhHHHHHHHHH
Confidence 99999999999999999988765311000 012334554 5699999998753 6899999 799999999999999
Q ss_pred hCCCCc-ccccccCCCCccchhhhHHHhhhcccc
Q 035967 339 VQPRAV-NWSLVTKGVTGMFSSNHTRCAVTLIGN 371 (381)
Q Consensus 339 ~~P~~i-d~~~~~~~~~~~~~~~n~~~a~~~a~~ 371 (381)
++|+++ ||+.+.+ +++++|+++||++|++
T Consensus 181 ~~P~~i~~~~~l~~----~~~~~n~~~a~~~A~~ 210 (245)
T 2wa7_A 181 CAPGLCPDWESWDP----QKPVDNAREAVQQADD 210 (245)
T ss_dssp HSTTSSTTGGGSCT----TCHHHHHHHHHHHHHH
T ss_pred HCccccccccccCc----ccHHHHHHHHHHHHHH
Confidence 999999 9988754 4889999999999998
No 14
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=100.00 E-value=1.1e-39 Score=308.43 Aligned_cols=183 Identities=24% Similarity=0.422 Sum_probs=159.6
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTA 181 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~p 181 (381)
.+++.+++|+|.++.+.+. .|.||.+|++||+.||.|++.+.|+.++.
T Consensus 27 ~q~~~f~~WiN~~L~~~~~--~v~~l~~dl~DGv~L~~Lle~l~~~~v~k------------------------------ 74 (254)
T 1wku_A 27 QQRKTFTAWCNSHLRKAGT--QIENIEEDFRNGLKLMLLLEVISGERLPR------------------------------ 74 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTC--CCSCTTTTTTTSHHHHHHHHHHHCSCCCC------------------------------
T ss_pred HHHHHHHHHHHHHccccCC--CccCHHHHccCHHHHHHHHHHhCcCCCCC------------------------------
Confidence 4688999999999986653 78999999999999999999999986542
Q ss_pred cccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCccc
Q 035967 182 KDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV 261 (381)
Q Consensus 182 eDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI~ 261 (381)
.++ | +++++++||||+|++++++.|++++||+++||+
T Consensus 75 -----------------------------------------~~~-~-~~~~~~~eNi~~aL~~~k~~gv~lv~I~~~DIv 111 (254)
T 1wku_A 75 -----------------------------------------PDK-G-KMRFHKIANVNKALDFIASKGVKLVSIGAEEIV 111 (254)
T ss_dssp -----------------------------------------CCS-C-CSHHHHHHHHHHHHHHHHTTTCCCCSCCHHHHH
T ss_pred -----------------------------------------CCC-C-ccHHHHHHhHHHHHHHHHHcCCCccCCCHHHHh
Confidence 111 2 568999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhhhccccCCCCCCCH-HHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhC
Q 035967 262 QGNKKLILALLWQMMRYNVLQLLKNLRFHSHGKEITD-ADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQ 340 (381)
Q Consensus 262 dgn~kliLgLiW~li~~~~~~~~~~~~~~~~~~~~~~-~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~ 340 (381)
|||.|+||||+||||++|+++.+. .+..+. +.||+|||+++++| ++++|+||+ +||+||+|||||||+++
T Consensus 112 dG~~kliLgLlW~li~~~~i~~i~-------~~~~~~~~~LL~W~~~~~~~y-~~v~v~nFs-~s~~DG~a~~aLi~~~~ 182 (254)
T 1wku_A 112 DGNLKMTLGMIWTIILRFAIQDIS-------VEETSAKEGLLLWCQRKTAPY-RNVNVQNFH-TSWKDGLALCALIHRHR 182 (254)
T ss_dssp HCCHHHHHHHHHHHHHHHHTTTCE-------ETTEEHHHHHHHHHHHHHTTC-TTCCCCSSS-GGGTTSHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHhhcccc-------cccccHHHHHHHHHHHHccCC-CCCcCCCCc-cchhhHHHHHHHHHHHC
Confidence 999999999999999998876542 123444 45999999999988 468999999 79999999999999999
Q ss_pred CCCcccccccCCCCccchhhhHHHhhhccccc
Q 035967 341 PRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNS 372 (381)
Q Consensus 341 P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~ 372 (381)
|++|||+.+.+. ++.+|+++||++|++.
T Consensus 183 P~~id~~~l~~~----~~~~n~~~a~~~A~~~ 210 (254)
T 1wku_A 183 PDLIDYAKLRKD----DPIGNLNTAFEVAEKY 210 (254)
T ss_dssp TTSCCGGGCCTT----CHHHHHHHHHHHHHHH
T ss_pred CCcccccccCcC----CHHHHHHHHHHHHHHH
Confidence 999999998754 7899999999999974
No 15
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=100.00 E-value=1.5e-40 Score=312.90 Aligned_cols=183 Identities=22% Similarity=0.319 Sum_probs=160.0
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
+|+|...|+++.. .++.+|+|++||++.||+++++.||+++||+++||+||++++||||+||||++|+++.+..
T Consensus 52 ~Lle~l~~~~~~~-----~~~~~~~~~~eNv~~aL~~~k~~g~~l~~I~~~DIvdg~~~liL~Llw~li~~~~i~~~~~- 125 (246)
T 1dxx_A 52 DLLEGLTGQKLPK-----EKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMK- 125 (246)
T ss_dssp HHHHHHHSCCCCC-----CCCSSHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHTTCHHHHHHHHHHHHHHHTTTHHHH-
T ss_pred HHHHHHcCCcCCC-----CCCccHHHHHHHHHHHHHHHHHcCCccccCCHHHhhcccHHHHHHHHHHHHHHHHHhhhhh-
Confidence 4677777777752 2367999999999999999999999999999999999999999999999999999876532
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCC-CCCH
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLA-VKNP 159 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~-~~d~ 159 (381)
+..++..+.++++.||+|||.+++.++ ..+|+||++||+||++||+|+|+++|+.++++.+. +++.
T Consensus 126 ------------e~~~~~~~~~~~~~LL~W~~~~~~~~~-~~~i~nFs~s~~DG~a~~aLi~~~~P~li~~~~~~~~~~~ 192 (246)
T 1dxx_A 126 ------------NIMAGLQQTNSEKILLSWVRQSTRNYP-QVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQSA 192 (246)
T ss_dssp ------------HHHHHHTTCCHHHHHHHHHHHHHTTCT-TCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHTCCCH
T ss_pred ------------hhhhhcccccHHHHHHHHHHHHhccCC-CCCcCCCcccchhHHHHHHHHHHHCcCccchhhhcccCCH
Confidence 112233345789999999999998653 35899999999999999999999999999998775 7899
Q ss_pred HHHHHHHHHhHH-hhCCcccccccccccCCC--chhHHHHHHHhhh
Q 035967 160 LQRAKLILEHAD-RMGCRRYLTAKDIVEGSP--NLNLAFVAHIFQH 202 (381)
Q Consensus 160 ~~na~~a~~~Ae-~Lgi~~~L~peDI~~~~~--k~il~~va~lf~~ 202 (381)
.+|++.||++|+ ++|||++++||||+.++| +++|||+++||+.
T Consensus 193 ~~n~~~a~~~A~~~lGi~~~l~peDi~~~~pD~k~i~tyva~l~~~ 238 (246)
T 1dxx_A 193 TQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQV 238 (246)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCHHHHSSSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCccCCHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 999999999999 599999999999999888 8999999999985
No 16
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=100.00 E-value=3.2e-39 Score=303.77 Aligned_cols=187 Identities=22% Similarity=0.394 Sum_probs=161.5
Q ss_pred ChHHHHHHHHHHHhhhcC---CccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCccc
Q 035967 102 PPEKILLRWMNFHLKKAG---YKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRY 178 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g---~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~ 178 (381)
.+++++++|+|.++.+.. ....|.||.+|++||+.+|.|++.+.|+.++.
T Consensus 12 ~q~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~--------------------------- 64 (245)
T 1sh5_A 12 VQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPR--------------------------- 64 (245)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCCC---------------------------
T ss_pred HHHHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCccccC---------------------------
Confidence 478899999999997631 22379999999999999999999999876531
Q ss_pred ccccccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCC
Q 035967 179 LTAKDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGN 258 (381)
Q Consensus 179 L~peDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~ 258 (381)
.++ +++++++|||++|++++++.|++++||+++
T Consensus 65 ----------------------------------------------~~~-~~~~~~~eNv~~aL~~~k~~g~~l~~I~~~ 97 (245)
T 1sh5_A 65 ----------------------------------------------EKG-RMRFHKLQNVQIALDYLRHRQVKLVNIRND 97 (245)
T ss_dssp ----------------------------------------------CCC-CSHHHHHHHHHHHHHHHHHTTCCCCSCCHH
T ss_pred ----------------------------------------------CCC-cchHHHHHhHHHHHHHHHHcCCcccCCChH
Confidence 012 569999999999999999999999999999
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHH-HHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHH
Q 035967 259 DIVQGNKKLILALLWQMMRYNVLQLLKNLRFHSHGKEITDAD-ILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLS 337 (381)
Q Consensus 259 dI~dgn~kliLgLiW~li~~~~~~~~~~~~~~~~~~~~~~~~-lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~ 337 (381)
||+|||.|+||||+||||++|.++.+...+ .++++++++ ||+|||+++++|. +++|+||+ +||+||+|||||+|
T Consensus 98 DIvdg~~k~iLgLlw~li~~~~i~~i~~~g---~~~~~~~~~~LL~W~~~~~~~~~-~~~v~nF~-~s~~DG~a~~aLi~ 172 (245)
T 1sh5_A 98 DIADGNPKLTLGLIWTIILHFQISDIQVSG---QSEDMTAKEKLLLWSQRMVEGYQ-GLRCDNFT-TSWRDGRLFNAIIH 172 (245)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTTTCCCTT---CCSSCCHHHHHHHHHHHHTTTST-TCCCCCSS-GGGTTSHHHHHHHH
T ss_pred hhhcccHHHHHHHHHHHHHhhccccccccc---ccccCCHHHHHHHHHHHHhccCC-CcccCCcc-ccccchHHHHHHHH
Confidence 999999999999999999998887653211 235567665 9999999999984 68999999 99999999999999
Q ss_pred hhCCCCcccccccCCCCccchhhhHHHhhhcccc
Q 035967 338 AVQPRAVNWSLVTKGVTGMFSSNHTRCAVTLIGN 371 (381)
Q Consensus 338 ~~~P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~ 371 (381)
+++|++|||+.+.+. ++.+|+++||++|++
T Consensus 173 ~~~P~~i~~~~l~~~----~~~~n~~~a~~~a~~ 202 (245)
T 1sh5_A 173 RHKPMLIDMNKVYRQ----TNLENLDQAFSVAER 202 (245)
T ss_dssp TTCTTTCCHHHHHHS----CHHHHHHHHHHHHHH
T ss_pred HHCCCCCCHHHcccC----CHHHHHHHHHHHHHH
Confidence 999999999988754 789999999999997
No 17
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=100.00 E-value=1.8e-39 Score=335.21 Aligned_cols=186 Identities=22% Similarity=0.376 Sum_probs=162.7
Q ss_pred CcccccCCCCcccccccCCCC----CCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHh
Q 035967 1 KLINVAVPGTIDERAINTKRL----LNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLAD 76 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~----~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~ 76 (381)
+|+|++.||+++|+++|++|. .+|+|++|||+.||+|+++.|++++||+++||+||++++||||+||||++|+++.
T Consensus 318 ~Lle~l~~g~v~~~~~~~~p~~~~~~~r~~~~eNv~~al~~~~~~gv~lv~i~~~DIvdg~~~~~LgLlW~li~~~~~~~ 397 (513)
T 1rt8_A 318 QAYDKITPNTVNWKKVNKAPASGDEMMRFKAVENCNYAVDLGKNQGFSLVGIQGADITDGSRTLTLALVWQMMRMNITKT 397 (513)
T ss_dssp HHHHHHSTTCCCGGGSCCCCTTSCCCCHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcchhhhcCCcccccccchHHHHHHHHHHHHHHHHcCceeeccchhhhhcCCchhhHHHHHHHHHHHHHHH
Confidence 467888999999999998642 6899999999999999999999999999999999999999999999999998766
Q ss_pred cccccCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCcccccccc-ccccchHHHHHHHHHhCCCCCCCCcCC
Q 035967 77 LNLKKTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFS-SDIKDGEAYANLLNVLAPEHSNPSTLA 155 (381)
Q Consensus 77 i~~~~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~-~d~~DG~~l~aLl~~~~p~~~~~~~~~ 155 (381)
+. .+..+++. .+++ .||+|||.++.+++...+|+||+ +||+||++||+|+|+++|+.+|++.+.
T Consensus 398 l~--------~l~~~~~~------~~~~-~LL~W~~~~~~~~~~~~~i~nF~~~s~~dG~a~~aLi~~~~P~~i~~~~l~ 462 (513)
T 1rt8_A 398 LH--------SLSRGGKT------LSDS-DMVAWANSMAAKGGKGSQIRSFRDPSISTGVFVLDVLHGIKSEYVDYNLVT 462 (513)
T ss_dssp TT--------C------C------CCHH-HHHHHHHHHHTTTCSSCCCSSTTCGGGGGSHHHHHHHHHHCGGGCCGGGCC
T ss_pred HH--------hhccCCCc------CCHH-HHHHHHHHHhhccCCCCCCCCCCcccccchHHHHHHHHHhCCCcCCHHhhc
Confidence 53 11112332 3555 49999999998655556899999 899999999999999999999998876
Q ss_pred CC----CHHHHHHHHHHhHHhhCCcccccccccccCCCchhHHHHHHHhh
Q 035967 156 VK----NPLQRAKLILEHADRMGCRRYLTAKDIVEGSPNLNLAFVAHIFQ 201 (381)
Q Consensus 156 ~~----d~~~na~~a~~~Ae~Lgi~~~L~peDI~~~~~k~il~~va~lf~ 201 (381)
+. +..+|+++||++|+++|||++++||||+.++|+++|||+++||+
T Consensus 463 ~~~~~~~~~~n~~~af~~A~~lGi~~~l~peDi~~~~pksi~tyva~l~~ 512 (513)
T 1rt8_A 463 DGSTEELAIQNARLAISIARKLGAVIFILPEDIVAVRPRLVLHFIGSLMA 512 (513)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHTTCHHHHHHHHHHHHT
T ss_pred cccChhhHHHHHHHHHHHHHHcCCCccCCHHHhcCCCcccHHHHHHHHHh
Confidence 54 79999999999999999999999999999999999999999996
No 18
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=100.00 E-value=3.1e-38 Score=297.19 Aligned_cols=191 Identities=23% Similarity=0.394 Sum_probs=158.5
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTA 181 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~p 181 (381)
.+++++++|+|.++.+.+.+ .|+||.+|++||+.+|.|++.+.|..++.
T Consensus 16 ~q~~~f~~WiN~~L~~~~~~-~v~dl~~dl~DG~~L~~Lle~l~~~~~~~------------------------------ 64 (246)
T 1dxx_A 16 VQKKTFTKWVNAQFSKFGKQ-HIENLFSDLQDGRRLLDLLEGLTGQKLPK------------------------------ 64 (246)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CCSCTTTTTTTSHHHHHHHHHHHSCCCCC------------------------------
T ss_pred HHHHHHHHHHHHhccccCCC-CccCHHHHhCcHHHHHHHHHHHcCCcCCC------------------------------
Confidence 47889999999999875432 69999999999999999999998865431
Q ss_pred cccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCccc
Q 035967 182 KDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV 261 (381)
Q Consensus 182 eDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI~ 261 (381)
.+| ++++|++|||++|++++++.|++++||+++||+
T Consensus 65 -------------------------------------------~~~-~~~~~~~eNv~~aL~~~k~~g~~l~~I~~~DIv 100 (246)
T 1dxx_A 65 -------------------------------------------EKG-STRVHALNNVNKALRVLQNNNVDLVNIGSTDIV 100 (246)
T ss_dssp -------------------------------------------CCC-SSHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHH
T ss_pred -------------------------------------------CCC-ccHHHHHHHHHHHHHHHHHcCCccccCCHHHhh
Confidence 012 468999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHh-hhhccccCCCCCCCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhC
Q 035967 262 QGNKKLILALLWQMMRYNVLQL-LKNLRFHSHGKEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQ 340 (381)
Q Consensus 262 dgn~kliLgLiW~li~~~~~~~-~~~~~~~~~~~~~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~ 340 (381)
|||.|+||||+||||++|.+.. +.....+ .++..+++.||+|||+++++|+ +++|+||+ +||+||+|||||+|+++
T Consensus 101 dg~~~liL~Llw~li~~~~i~~~~~e~~~~-~~~~~~~~~LL~W~~~~~~~~~-~~~i~nFs-~s~~DG~a~~aLi~~~~ 177 (246)
T 1dxx_A 101 DGNHKLTLGLIWNIILHWQVKNVMKNIMAG-LQQTNSEKILLSWVRQSTRNYP-QVNVINFT-TSWSDGLALNALIHSHR 177 (246)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTHHHHHHHHH-HTTCCHHHHHHHHHHHHHTTCT-TCCCCSSS-GGGTTSHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhhhhhhh-cccccHHHHHHHHHHHHhccCC-CCCcCCCc-ccchhHHHHHHHHHHHC
Confidence 9999999999999998776643 3221110 0122345679999999999985 68999999 99999999999999999
Q ss_pred CCCcccccccCCCCccchhhhHHHhhhcccccc
Q 035967 341 PRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNSS 373 (381)
Q Consensus 341 P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~~ 373 (381)
|+++||+.+.+. ++..+|+++||++|++..
T Consensus 178 P~li~~~~~~~~---~~~~~n~~~a~~~A~~~l 207 (246)
T 1dxx_A 178 PDLFDWNSVVSQ---QSATQRLEHAFNIARYQL 207 (246)
T ss_dssp GGGSCHHHHHTC---CCHHHHHHHHHHHHHHTT
T ss_pred cCccchhhhccc---CCHHHHHHHHHHHHHHhC
Confidence 999999987632 467799999999998643
No 19
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=100.00 E-value=7.3e-37 Score=292.32 Aligned_cols=193 Identities=22% Similarity=0.408 Sum_probs=155.9
Q ss_pred ChHHHHHHHHHHHhhhcC-------CccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhC
Q 035967 102 PPEKILLRWMNFHLKKAG-------YKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMG 174 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g-------~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lg 174 (381)
.+++.+++|+|.++.+.+ ....|.||.+|++||+.+|.|++.+.|+.+
T Consensus 24 ~q~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v------------------------- 78 (275)
T 1aoa_A 24 EEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTI------------------------- 78 (275)
T ss_dssp HHHHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSS-------------------------
T ss_pred HHHHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCC-------------------------
Confidence 468899999999998642 112579999999999999999998876544
Q ss_pred CcccccccccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeee
Q 035967 175 CRRYLTAKDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVN 254 (381)
Q Consensus 175 i~~~L~peDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvn 254 (381)
+|++++++| .++|+++|||++|++++++.|++++|
T Consensus 79 --------------------------------------------~~~~i~~~~-~~~~~~~eNv~~aL~~~k~~g~~l~~ 113 (275)
T 1aoa_A 79 --------------------------------------------DERAINKKK-LTPFIIQENLNLALNSASAIGCHVVN 113 (275)
T ss_dssp --------------------------------------------CGGGSCCSS-CCHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred --------------------------------------------CccccCCCC-CCHHHHHHHHHHHHHHHHHcCCcccC
Confidence 466677665 35899999999999999999999999
Q ss_pred cCCCcccCCcchhHHHHHHHHHHHHHHHhhhhccccC-------CCCC------CCHH-HHHHHHHhhhccCCCccccCC
Q 035967 255 IAGNDIVQGNKKLILALLWQMMRYNVLQLLKNLRFHS-------HGKE------ITDA-DILQWANAKVRISGSQSHMNS 320 (381)
Q Consensus 255 i~~~dI~dgn~kliLgLiW~li~~~~~~~~~~~~~~~-------~~~~------~~~~-~lL~W~~~~~~~~~~~~~i~n 320 (381)
|+++||+||+.|+||||+||||+++.+..+. +..++ +|++ .+++ .||+|||++++.+|.. +|+|
T Consensus 114 I~~~DIvdg~~~liLgLlw~li~~~~~~~I~-~~~~~~l~~ll~~ge~~~~~~~~s~~~~LL~W~n~~l~~~g~~-~I~n 191 (275)
T 1aoa_A 114 IGAEDLRAGKPHLVLGLLWQIIKIGLFADIE-LSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQ-KINN 191 (275)
T ss_dssp CCHHHHHTTCHHHHHHHHHHHHHHHHHHHHH-SSCTTCC--------CHHHHHTSCHHHHHHHHHHHHHHHTTCC-CCSC
T ss_pred CCHHHHHcCcHHHHHHHHHHHHHHhhhcccc-cccChHHHHhhccCCchhhhhccCHHHHHHHHHHHHHHhcCCC-cchh
Confidence 9999999999999999999999877655432 11110 1332 3444 5999999999887632 3999
Q ss_pred CCCCCccchhHHHHHHHhhCCC---------CcccccccCCCCccchhhhHHHhhhcccc
Q 035967 321 FKDKSLADGIFFLELLSAVQPR---------AVNWSLVTKGVTGMFSSNHTRCAVTLIGN 371 (381)
Q Consensus 321 F~d~sw~dG~~~~aLi~~~~P~---------~id~~~~~~~~~~~~~~~n~~~a~~~a~~ 371 (381)
|+ +||+||++|+||+|+++|+ ++||+.+. ++++.+||++||++|++
T Consensus 192 F~-~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~~~~~----~~~~~~n~~~a~~~A~~ 246 (275)
T 1aoa_A 192 FS-ADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFN----ETDDLKRAESMLQQADK 246 (275)
T ss_dssp SS-TTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCCTTTT----CSSHHHHHHHHHHHHTT
T ss_pred hh-hhhhhhHHHHHHHHHHCCCccccccccccccccCCC----ccCHHHHHHHHHHHHHH
Confidence 99 7999999999999999999 66776654 45889999999999984
No 20
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=100.00 E-value=1.9e-37 Score=319.70 Aligned_cols=188 Identities=22% Similarity=0.427 Sum_probs=162.4
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcc-c
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLN-L 79 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~-~ 79 (381)
+|++...||+++|+.+++++..+|+|++|||+.||+|+++.|++++||+++||+||++++||||+||||+++....++ +
T Consensus 309 ~Lle~l~~~~~~~~~~~~~~~~~r~~~leNv~~aL~~~k~~~v~l~~I~~~dIvdg~~kl~L~Liw~lir~~i~~~~~~l 388 (506)
T 1pxy_A 309 EVLDKVSPSSVNWKHASKPPIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDIVQGNKKLILGLLWQLMRFHMLQLLKSL 388 (506)
T ss_dssp HHHHHHSTTCCCGGGCCCSSCCCHHHHHHHHHHHHHHHHHTTCCCCSCCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCccccccccCCccccHHHHHHHHHHHHHHHHHcCCcccCCCHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHh
Confidence 367889999999999998755799999999999999999999999999999999999999999999999554433322 1
Q ss_pred ccCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCcccccccc-ccccchHHHHHHHHHhCCCCCCCCcCCCC-
Q 035967 80 KKTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFS-SDIKDGEAYANLLNVLAPEHSNPSTLAVK- 157 (381)
Q Consensus 80 ~~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~-~d~~DG~~l~aLl~~~~p~~~~~~~~~~~- 157 (381)
..+ ..++. .+++.||+|||.+++++|+..+|+||+ +||+||++||+|+|+++|+.+|++.+.+.
T Consensus 389 ~~~-------~~~~~-------~~~~~LL~W~~~~~~~~~~~~~i~nF~d~s~~dG~a~~aLi~~~~P~li~~~~l~~~~ 454 (506)
T 1pxy_A 389 RSR-------TLGKE-------MTDADILSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKGE 454 (506)
T ss_dssp CC------------C-------CCHHHHHHHHHHHHHTTTCCCCCSSTTCGGGGGCHHHHHHHHHHCGGGCCTTSCCCSC
T ss_pred hcc-------ccccc-------ccHHHHHHHHHHHhhhcCCccccCCCCcccccchHHHHHHHHhhCCCeeehhhcccCC
Confidence 110 01121 357889999999998766667899999 89999999999999999999999988763
Q ss_pred ---CHHHHHHHHHHhHHhhCCcccccccccccCCCchhHHHHHHHhhh
Q 035967 158 ---NPLQRAKLILEHADRMGCRRYLTAKDIVEGSPNLNLAFVAHIFQH 202 (381)
Q Consensus 158 ---d~~~na~~a~~~Ae~Lgi~~~L~peDI~~~~~k~il~~va~lf~~ 202 (381)
+..+|+++||++|+++|||++++||||+.++++++|||+++||+.
T Consensus 455 s~~~~~~N~~~a~~~a~~lGi~~~l~peDi~~~d~ksi~tyv~~l~~~ 502 (506)
T 1pxy_A 455 TDDEKRLNATYIVSVARKLGCSVFLLPEDIVEVNQKMILILTASIMYW 502 (506)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHcCCCCcCCHHHccCCChhHHHHHHHHHHHH
Confidence 568999999999999999999999999999999999999999985
No 21
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=100.00 E-value=1.3e-35 Score=323.27 Aligned_cols=178 Identities=22% Similarity=0.357 Sum_probs=160.5
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHHHhcccc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLK 80 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l~~i~~~ 80 (381)
+|+|.+.|++|+. +++ +.+|+|++|||+.||+|+++.||++|||+|+||+||++++|||||||||++|+++.++.+
T Consensus 43 ~l~e~l~~~~~~~--~~~--~~~~~~~~eN~~~~l~~~~~~g~~~~~i~~~di~~g~~~~~l~l~w~l~~~~~~~~~~~~ 118 (863)
T 1sjj_A 43 LLLEVISGERLAK--PER--GKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVE 118 (863)
T ss_dssp HHHHHTSCCCCCC--SCC--CSSHHHHHHHHHHHHHHHHHTTCCCTTCCSHHHHTTCHHHHHHHHHHHHSCCCCCCCCCC
T ss_pred HHHHHhCCCceeC--CCC--CccHHHHHHHHHHHHHHHHHcCCccCCCChHHhhcCCHHHHHHHHHHHHHHHhhcccchh
Confidence 4789999999974 554 479999999999999999999999999999999999999999999999999998776532
Q ss_pred cCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCc-cccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCH
Q 035967 81 KTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYK-KIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNP 159 (381)
Q Consensus 81 ~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~-~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~ 159 (381)
..++++.||+|||.++. |++ .+|+||++||+||++||+|+|+++|+.+|++.+.+.+.
T Consensus 119 -------------------~~~~~~~ll~W~~~~~~--~~~~~~v~nf~~s~~dg~~~~~li~~~~p~~~~~~~~~~~~~ 177 (863)
T 1sjj_A 119 -------------------ETSAKEGLLLWYQRKTA--PYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDP 177 (863)
T ss_dssp -------------------CCCSTTTTHHHHHHHHT--TSTTCCCCSSSGGGTTSHHHHHHHHTTCCSSSCSGGGGSCCC
T ss_pred -------------------ccchHHHHHHHHHHhcc--CCCCCCCCCCccccccHHHHHHHHHHhCCCCcChhhCCCCCH
Confidence 23677889999999885 443 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHh-hCCcccccccccccC-CC--chhHHHHHHHhhhH
Q 035967 160 LQRAKLILEHADR-MGCRRYLTAKDIVEG-SP--NLNLAFVAHIFQHR 203 (381)
Q Consensus 160 ~~na~~a~~~Ae~-Lgi~~~L~peDI~~~-~~--k~il~~va~lf~~~ 203 (381)
.+|+++||++|++ +|||++++|+||+.+ .| +++||||++||+.+
T Consensus 178 ~~n~~~a~~~a~~~lg~~~~l~~ed~~~~~~pd~~~~~~y~~~l~~~~ 225 (863)
T 1sjj_A 178 LTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAF 225 (863)
T ss_dssp GGGCTHHHHHHHHHHCCCCSCCHHHHTTCSSCCHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHhCCCCCccCHHHHhCCCCCcHHHHHHHHHHHHHHh
Confidence 9999999999997 999999999999864 45 89999999999975
No 22
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=100.00 E-value=1.7e-34 Score=314.44 Aligned_cols=183 Identities=24% Similarity=0.412 Sum_probs=159.4
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTA 181 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~p 181 (381)
.+++++++|+|.++.+.+. +|+|+.+|++||+.||.|++.+.|+.++.
T Consensus 8 ~q~~~f~~Win~~L~~~~~--~v~~l~~dl~DG~~L~~l~e~l~~~~~~~------------------------------ 55 (863)
T 1sjj_A 8 QQRKTFTAWCNSHLRKAGT--QIENIEEDFRDGLKLMLLLEVISGERLAK------------------------------ 55 (863)
T ss_dssp HHHHHHHHHHHHHHHHHCS--CCCCCSSTTSSCHHHHHHHHHTSCCCCCC------------------------------
T ss_pred HHHHHHHHHHHHHhccCCC--CccCHHHHhcCHHHHHHHHHHhCCCceeC------------------------------
Confidence 4788999999999987653 69999999999999999999999987642
Q ss_pred cccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCccc
Q 035967 182 KDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV 261 (381)
Q Consensus 182 eDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI~ 261 (381)
.++ | +++++++||||+|+++++..|+++|||+++||+
T Consensus 56 -----------------------------------------~~~-~-~~~~~~~eN~~~~l~~~~~~g~~~~~i~~~di~ 92 (863)
T 1sjj_A 56 -----------------------------------------PER-G-KMRVHKISNVNKALDFIASKGVKLVSIGAEEIV 92 (863)
T ss_dssp -----------------------------------------SCC-C-SSHHHHHHHHHHHHHHHHHTTCCCTTCCSHHHH
T ss_pred -----------------------------------------CCC-C-ccHHHHHHHHHHHHHHHHHcCCccCCCChHHhh
Confidence 111 2 568999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhhhccccCCCCCCC-HHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhC
Q 035967 262 QGNKKLILALLWQMMRYNVLQLLKNLRFHSHGKEIT-DADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQ 340 (381)
Q Consensus 262 dgn~kliLgLiW~li~~~~~~~~~~~~~~~~~~~~~-~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~ 340 (381)
|||.|+||||+|+||++|+++.+. ++..+ ++.||+|||.++++| ++++|+||+ +||+||++||||||+++
T Consensus 93 ~g~~~~~l~l~w~l~~~~~~~~~~-------~~~~~~~~~ll~W~~~~~~~~-~~~~v~nf~-~s~~dg~~~~~li~~~~ 163 (863)
T 1sjj_A 93 DGNVKMTLGMIWTIILRFAIQDIS-------VEETSAKEGLLLWYQRKTAPY-KNVNIQNFH-ISWKDGLGFCALIHRHR 163 (863)
T ss_dssp TTCHHHHHHHHHHHHSCCCCCCCC-------CCCCCSTTTTHHHHHHHHTTS-TTCCCCSSS-GGGTTSHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHHHhhcccc-------hhccchHHHHHHHHHHhccCC-CCCCCCCCc-cccccHHHHHHHHHHhC
Confidence 999999999999999988875432 22333 455999999999988 468999999 79999999999999999
Q ss_pred CCCcccccccCCCCccchhhhHHHhhhccccc
Q 035967 341 PRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNS 372 (381)
Q Consensus 341 P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~ 372 (381)
|++|||+.+.+. ++.+|+++||++|++.
T Consensus 164 p~~~~~~~~~~~----~~~~n~~~a~~~a~~~ 191 (863)
T 1sjj_A 164 PELIDYGKLRKD----DPLTNLNTAFDVAEKY 191 (863)
T ss_dssp CSSSCSGGGGSC----CCGGGCTHHHHHHHHH
T ss_pred CCCcChhhCCCC----CHHHHHHHHHHHHHHh
Confidence 999999999764 7889999999999974
No 23
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=99.93 E-value=1.6e-26 Score=192.98 Aligned_cols=101 Identities=26% Similarity=0.352 Sum_probs=94.1
Q ss_pred CChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHh-hCCcccc
Q 035967 101 LPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADR-MGCRRYL 179 (381)
Q Consensus 101 ~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~-Lgi~~~L 179 (381)
+++++.||+|||.+++.++ ..+|+||++||+||++||+|||+++|+.+|++.+.+++..+|++.||++|++ ||||++|
T Consensus 6 ~~~~~~LL~W~q~~~~~y~-~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~lL 84 (116)
T 1wyl_A 6 SGTQEELLRWCQEQTAGYP-GVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGITPVV 84 (116)
T ss_dssp SSSHHHHHHHHHHHHHHST-TCCCSCTTTTTTSSHHHHHHHHHHCTTSCCCSSGGGCCHHHHHHHHHHHHHHTTCCCCCS
T ss_pred CCHHHHHHHHHHHHhccCC-CCCCCCccccccccHHHHHHHHHHCcCCCCHHHhccCCHHHHHHHHHHHHHHHcCCcccc
Confidence 4789999999999998642 2589999999999999999999999999999999999999999999999997 9999999
Q ss_pred cccccccC-CCchhHHHHHHHhhh
Q 035967 180 TAKDIVEG-SPNLNLAFVAHIFQH 202 (381)
Q Consensus 180 ~peDI~~~-~~k~il~~va~lf~~ 202 (381)
+|||++.+ +++++||||++||+.
T Consensus 85 ~peD~~~~~d~ksv~tYvs~l~~~ 108 (116)
T 1wyl_A 85 SAQAVVAGSDPLGLIAYLSHFHSA 108 (116)
T ss_dssp CHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CHHHHhcCCchhHHHHHHHHHHHH
Confidence 99999986 678999999999985
No 24
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=99.93 E-value=1.5e-26 Score=190.98 Aligned_cols=102 Identities=19% Similarity=0.321 Sum_probs=93.1
Q ss_pred CChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHH-hhCCcccc
Q 035967 101 LPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHAD-RMGCRRYL 179 (381)
Q Consensus 101 ~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae-~Lgi~~~L 179 (381)
.++++.||+|||.+++.++ ..+|+||++||+||++||+|+|+++|+.+|++.+.+++..+|++.||++|+ +||||++|
T Consensus 2 ~s~k~~LL~W~q~~~~~y~-~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ll 80 (109)
T 1bkr_A 2 KSAKDALLLWCQMKTAGYP-NVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLL 80 (109)
T ss_dssp CHHHHHHHHHHHHHTTTCT-TCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCCTTCHHHHHHHHHHHHHHHHCCCCCC
T ss_pred CCHHHHHHHHHHHHHccCC-CCCCCCCcccccccHHHHHHHHHHCcCCCCHHHcCcCCHHHHHHHHHHHHHHHcCCCccC
Confidence 3689999999999987432 358999999999999999999999999999999999999999999999999 59999999
Q ss_pred cccccccCCC--chhHHHHHHHhhhH
Q 035967 180 TAKDIVEGSP--NLNLAFVAHIFQHR 203 (381)
Q Consensus 180 ~peDI~~~~~--k~il~~va~lf~~~ 203 (381)
+|||++.+.| +++||||+++|+.+
T Consensus 81 ~~eDv~~~~pD~ksi~tYvs~~~~~f 106 (109)
T 1bkr_A 81 DPEDISVDHPDEKSIITYVVTYYHYF 106 (109)
T ss_dssp CHHHHSSSSCCHHHHHHHHHHHHHHH
T ss_pred CHHHccCCCCcHHHHHHHHHHHHHHh
Confidence 9999988765 78999999999864
No 25
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=99.93 E-value=1.1e-26 Score=194.37 Aligned_cols=105 Identities=22% Similarity=0.389 Sum_probs=94.9
Q ss_pred hhCCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHH-hhCCc
Q 035967 98 LMSLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHAD-RMGCR 176 (381)
Q Consensus 98 ~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae-~Lgi~ 176 (381)
+.+++++++||+|||.+++.++ ..+|+||++||+||++||+|+|+++|+.+|++.+.+++..+|++.||++|+ +||||
T Consensus 4 ~~~~~~~~~LL~W~q~~~~~y~-~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~ 82 (118)
T 1bhd_A 4 LQQTNSEKILLSWVRQTTRPYS-QVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKMSPIERLEHAFSKAQTYLGIE 82 (118)
T ss_dssp CCCSHHHHHHHHHHHHHHTTST-TCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHHSCHHHHHHHHHHHHHHHHCCC
T ss_pred cccCCHHHHHHHHHHHHhccCC-CCCCCCCcccccCcHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCC
Confidence 3456899999999999997442 258999999999999999999999999999999999999999999999999 69999
Q ss_pred ccccccccccCCC--chhHHHHHHHhhhH
Q 035967 177 RYLTAKDIVEGSP--NLNLAFVAHIFQHR 203 (381)
Q Consensus 177 ~~L~peDI~~~~~--k~il~~va~lf~~~ 203 (381)
++|+|||++.+.| +++||||++||+.+
T Consensus 83 ~ll~~eDv~~~~pD~ksvmtYvs~l~~~~ 111 (118)
T 1bhd_A 83 KLLDPEDVAVRLPDKKSIIMYLTSLFEVL 111 (118)
T ss_dssp CCSCHHHHHTSCCCHHHHHHHHHHHHHHC
T ss_pred cccCHHHhhcCCCcHHHHHHHHHHHHHHC
Confidence 9999999988755 78999999999863
No 26
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.93 E-value=3.5e-26 Score=191.67 Aligned_cols=102 Identities=19% Similarity=0.279 Sum_probs=93.6
Q ss_pred CCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccc
Q 035967 100 SLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYL 179 (381)
Q Consensus 100 ~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L 179 (381)
+.++++.||+|||.+++.+. ..+|+||++||+||++||+|||+++|+.+|++.+.+++..+|+++||++|++||||++|
T Consensus 7 ~~~~~~~LL~W~~~~~~~y~-~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~~~~~~n~~~af~~a~~LGi~~ll 85 (119)
T 2d89_A 7 GPNASQSLLVWCKEVTKNYR-GVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIGISRLL 85 (119)
T ss_dssp CCCCHHHHHHHHHHHTTTCS-SCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCTTCSHHHHHHHHHHHHHHTCCCCS
T ss_pred CCCHHHHHHHHHHHHhccCC-CCCCCCccccccccHHHHHHHHHHCcCcCChhhhcccCHHHHHHHHHHHHHHhCCCccc
Confidence 35899999999999997542 35899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccC---CCchhHHHHHHHhhh
Q 035967 180 TAKDIVEG---SPNLNLAFVAHIFQH 202 (381)
Q Consensus 180 ~peDI~~~---~~k~il~~va~lf~~ 202 (381)
+||||+.+ +++++||||++||+.
T Consensus 86 ~peDi~~~~~pD~ksvmtYvs~l~~~ 111 (119)
T 2d89_A 86 EPSDMVLLAIPDKLTVMTYLYQIRAH 111 (119)
T ss_dssp CHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred CHHHHhccCCCcHHHHHHHHHHHHHH
Confidence 99999854 568999999999986
No 27
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=99.93 E-value=1e-25 Score=190.90 Aligned_cols=101 Identities=19% Similarity=0.314 Sum_probs=92.9
Q ss_pred CChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHH-hhCCcccc
Q 035967 101 LPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHAD-RMGCRRYL 179 (381)
Q Consensus 101 ~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae-~Lgi~~~L 179 (381)
.++++.||+|||.+++.++ ..+|+||++||+||++||+|||+++|+.+|++.+.+++..+|++.||++|+ +||||++|
T Consensus 6 ~s~k~~LL~W~q~~~~~y~-~v~V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~Lgi~~ll 84 (127)
T 1wyq_A 6 SGAKDALLLWCQMKTAGYP-NVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNAFNLAEKELGLTKLL 84 (127)
T ss_dssp CCSTHHHHHHHHHHHHTSS-SCCCSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCSSCCHHHHHHHHHHHHHTTCCCCCS
T ss_pred CCHHHHHHHHHHHHHhcCC-CCCCCCCcccccccHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCCccc
Confidence 4899999999999997432 358999999999999999999999999999999999999999999999999 59999999
Q ss_pred cccccccCCC--chhHHHHHHHhhh
Q 035967 180 TAKDIVEGSP--NLNLAFVAHIFQH 202 (381)
Q Consensus 180 ~peDI~~~~~--k~il~~va~lf~~ 202 (381)
+|||+..++| +++||||++||+.
T Consensus 85 ~~eDv~~~~pDeksimtYvs~l~~~ 109 (127)
T 1wyq_A 85 DPEDVNVDQPDEKSIITYVATYYHY 109 (127)
T ss_dssp CTTTSCSSSCCHHHHHHHHHHHHHH
T ss_pred CHHHhccCCCcHHHHHHHHHHHHHH
Confidence 9999988765 6899999999986
No 28
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=99.92 E-value=8.1e-26 Score=192.51 Aligned_cols=108 Identities=20% Similarity=0.176 Sum_probs=96.9
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTA 181 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~p 181 (381)
.+++++++|+|.|+.+.+. +|+|+.+|++||+.|+.|++.+.|+.++
T Consensus 22 ~q~ktft~WiN~~L~~~~~--~v~dL~~Dl~DGv~L~~Lle~ls~~~~~------------------------------- 68 (131)
T 2vzc_A 22 VVKKTLITFVNKHLNKLNL--EVTELETQFADGVYLVLLMGLLEGYFVP------------------------------- 68 (131)
T ss_dssp HHHHHHHHHHHHHHGGGTC--CCCCTTTTTTTSHHHHHHHHHHTTCCCC-------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCC--cccCHHHHcccHHHHHHHHHHhcCCCCC-------------------------------
Confidence 3678899999999998775 7999999999999999999999887654
Q ss_pred cccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCccc
Q 035967 182 KDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV 261 (381)
Q Consensus 182 eDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI~ 261 (381)
|++++++| ++++|++|||++|++++++.|++++||+|+||+
T Consensus 69 --------------------------------------~~~~~~~p-~~r~~kieNv~~aL~~lk~~gi~l~~I~~~DIv 109 (131)
T 2vzc_A 69 --------------------------------------LHSFFLTP-DSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIV 109 (131)
T ss_dssp --------------------------------------TTSSCSSC-CSHHHHHHHHHHHHHHHHHTTCCCCSSCHHHHH
T ss_pred --------------------------------------HHHhcCCC-CcHHHHHHHHHHHHHHHHHcCCCcCCCCHHHhh
Confidence 44566666 579999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHH
Q 035967 262 QGNKKLILALLWQMMRYNVL 281 (381)
Q Consensus 262 dgn~kliLgLiW~li~~~~~ 281 (381)
|||.|+||||+||||++|+.
T Consensus 110 dGn~kliLgLiW~li~~~~~ 129 (131)
T 2vzc_A 110 NCDLKSTLRVLYNLFTKYRN 129 (131)
T ss_dssp TTCHHHHHHHHHHHHHHHTT
T ss_pred CCCHHhHHHHHHHHHHHHhc
Confidence 99999999999999988753
No 29
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=99.92 E-value=1.2e-25 Score=190.60 Aligned_cols=104 Identities=21% Similarity=0.323 Sum_probs=94.4
Q ss_pred CCChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHh-hCCccc
Q 035967 100 SLPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADR-MGCRRY 178 (381)
Q Consensus 100 ~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~-Lgi~~~ 178 (381)
..++++.||+|||.+++.++ ..+|+||++||+||++||+|||+++|+.+|++.+.+++..+|++.||++|++ +|||++
T Consensus 5 ~~~~k~~LL~W~q~~~~~y~-~v~V~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgip~l 83 (128)
T 2d87_A 5 SSGIKQMLLDWCRAKTRGYE-HVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCPQL 83 (128)
T ss_dssp SCCHHHHHHHHHHHHSSSCT-TCCCSCTTTTTTSSHHHHHHHHHHCTTTSCSTTSCSSCHHHHHHHHHHHHHHHHCCCCC
T ss_pred cCCHHHHHHHHHHHHhccCC-CCCCCCccccccccHHHHHHHHHHCcCcCCHHHcCccCHHHHHHHHHHHHHHcCCCCcc
Confidence 35899999999999997542 3589999999999999999999999999999999999999999999999997 999999
Q ss_pred ccccccccCC---CchhHHHHHHHhhhHH
Q 035967 179 LTAKDIVEGS---PNLNLAFVAHIFQHRW 204 (381)
Q Consensus 179 L~peDI~~~~---~k~il~~va~lf~~~~ 204 (381)
|+||||+.++ ++++||||++||+.+.
T Consensus 84 L~peD~v~~~~pD~ksvmtYvs~l~~~~~ 112 (128)
T 2d87_A 84 LDTEDMVRLREPDWKCVYTYIQEFYRCLV 112 (128)
T ss_dssp SCHHHHHHSSSCCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHhccCCccHHHHHHHHHHHHHHHh
Confidence 9999997553 5789999999999763
No 30
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=99.92 E-value=5.8e-26 Score=190.82 Aligned_cols=101 Identities=17% Similarity=0.315 Sum_probs=92.3
Q ss_pred CChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHh-hCCcccc
Q 035967 101 LPPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADR-MGCRRYL 179 (381)
Q Consensus 101 ~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~-Lgi~~~L 179 (381)
.++++.||+|||.+++.+. ..+|+||++||+||++||+|||+++|+.+|++.+.+++..+|++.||++|++ ||||++|
T Consensus 8 ~~~~~~LL~W~q~~~~~y~-~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~lL 86 (121)
T 2d88_A 8 VARSSKLLGWCQRQTDGYA-GVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIM 86 (121)
T ss_dssp CSSSCHHHHHHHHHSTTSS-SCCCCCSSHHHHTSHHHHHHHHHHCTTTSCTTTSCTTCHHHHHHHHHHHHHHHTCCCCSS
T ss_pred cCHHHHHHHHHHHHhccCC-CCCCCCchhhccccHHHHHHHHHhCcCcCCHHHcCccCHHHHHHHHHHHHHHHcCCCCcC
Confidence 3788899999999997542 3589999999999999999999999999999999999999999999999996 9999999
Q ss_pred ccccccc-C--CCchhHHHHHHHhhh
Q 035967 180 TAKDIVE-G--SPNLNLAFVAHIFQH 202 (381)
Q Consensus 180 ~peDI~~-~--~~k~il~~va~lf~~ 202 (381)
+|||++. + +++++||||++||+.
T Consensus 87 ~peD~~~~~~pD~ksimtYvs~l~~~ 112 (121)
T 2d88_A 87 TGKEMASVGEPDKLSMVMYLTQFYEM 112 (121)
T ss_dssp CHHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred CHHHHhccCCCcHHHHHHHHHHHHHH
Confidence 9999986 3 558999999999986
No 31
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=99.91 E-value=5.2e-25 Score=184.51 Aligned_cols=101 Identities=25% Similarity=0.440 Sum_probs=93.7
Q ss_pred ChHHHHHHHHHHHhhhcCCcccccccc-ccccchHHHHHHHHHhCCCCCCCCc-----CCCCCHHHHHHHHHHhHHhhCC
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFS-SDIKDGEAYANLLNVLAPEHSNPST-----LAVKNPLQRAKLILEHADRMGC 175 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~-~d~~DG~~l~aLl~~~~p~~~~~~~-----~~~~d~~~na~~a~~~Ae~Lgi 175 (381)
..++.|++|||++++++|..++|+||+ +||+||++||+|||+++|+.+|++. +++++..+||++||++|+++||
T Consensus 7 i~d~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~ArklG~ 86 (124)
T 1wjo_A 7 GNDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGA 86 (124)
T ss_dssp SCCHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHHHTCC
T ss_pred cCHHHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 357889999999999888767899999 9999999999999999999999983 4557789999999999999999
Q ss_pred cccccccccccCCCchhHHHHHHHhhh
Q 035967 176 RRYLTAKDIVEGSPNLNLAFVAHIFQH 202 (381)
Q Consensus 176 ~~~L~peDI~~~~~k~il~~va~lf~~ 202 (381)
+.++.||||+.++||++|||+++||+.
T Consensus 87 ~~~l~pEDIve~~pK~ilt~va~l~~~ 113 (124)
T 1wjo_A 87 RVYALPEDLVEVKPKMVMTVFACLMGR 113 (124)
T ss_dssp SCCCCHHHHHHTCTTTTTHHHHHHHHH
T ss_pred CcccCHHHHhcCcchhhHHHHHHHHHH
Confidence 999999999999999999999999985
No 32
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=7.7e-23 Score=173.85 Aligned_cols=108 Identities=26% Similarity=0.448 Sum_probs=95.3
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTA 181 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~p 181 (381)
.+++++++|+|.++.+.+.+..|.||.+|++||+.||.|++.+.|+.++
T Consensus 18 ~q~~~f~~WIN~~L~~~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~------------------------------- 66 (129)
T 2yrn_A 18 DQKRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKIE------------------------------- 66 (129)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCT-------------------------------
T ss_pred HHHHHHHHHHHHHhcccCCCccchhHHHHcccHHHHHHHHHHHhcCCcc-------------------------------
Confidence 3678999999999987665446999999999999999999999998763
Q ss_pred cccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCCccc
Q 035967 182 KDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV 261 (381)
Q Consensus 182 eDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~dI~ 261 (381)
+++++| +++++++|||++|++++++.|+++++|+++||+
T Consensus 67 ----------------------------------------~~~~~p-~~~~~~~eNv~~aL~~~~~~gv~~~~i~~~DI~ 105 (129)
T 2yrn_A 67 ----------------------------------------DINGCP-KNRSQMIENIDACLNFLAAKGINIQGLSAEEIR 105 (129)
T ss_dssp ----------------------------------------TCCSSC-CSTTHHHHHHHHHHHHHHHHTCCCTTCCHHHHH
T ss_pred ----------------------------------------cccCCC-CcHHHHHHHHHHHHHHHHHhCCcccCCChhhhh
Confidence 234445 579999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHH
Q 035967 262 QGNKKLILALLWQMMRYNVL 281 (381)
Q Consensus 262 dgn~kliLgLiW~li~~~~~ 281 (381)
|||.++||||+|+||||++.
T Consensus 106 dgn~~~iL~Llw~L~r~~q~ 125 (129)
T 2yrn_A 106 NGNLKAILGLFFSLSRYKQQ 125 (129)
T ss_dssp HTCHHHHHHHHHHHHHHHSS
T ss_pred cCCHhHHHHHHHHHHHHHhh
Confidence 99999999999999988753
No 33
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=99.84 E-value=1.5e-21 Score=163.54 Aligned_cols=81 Identities=28% Similarity=0.516 Sum_probs=75.8
Q ss_pred CCCCCCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCCC-CccchhhhHHHhhhccc
Q 035967 292 HGKEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGV-TGMFSSNHTRCAVTLIG 370 (381)
Q Consensus 292 ~~~~~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~~-~~~~~~~n~~~a~~~a~ 370 (381)
+|+++++++||+|||++++++|+.++|+||+|+||+||++|++|||+++|++|||+.|.++. +++++++||+|||++|+
T Consensus 3 ~~~~i~d~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~Ar 82 (124)
T 1wjo_A 3 SGSSGNDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMAR 82 (124)
T ss_dssp CSCCSCCHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 57899999999999999998887789999999999999999999999999999999999876 88999999999999998
Q ss_pred cc
Q 035967 371 NS 372 (381)
Q Consensus 371 ~~ 372 (381)
+-
T Consensus 83 kl 84 (124)
T 1wjo_A 83 RI 84 (124)
T ss_dssp HT
T ss_pred Hc
Confidence 53
No 34
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=99.77 E-value=3.9e-19 Score=148.16 Aligned_cols=70 Identities=21% Similarity=0.278 Sum_probs=63.9
Q ss_pred CHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCCCCccchhhhHHHhhhccccc
Q 035967 297 TDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNS 372 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~ 372 (381)
+++.||+|||+++++|+ +++|+||+ +||+||+|||||||+++|++|||+.+.+. +..+|+++||++|++.
T Consensus 8 ~~~~LL~W~q~~~~~y~-~v~v~nFs-~sw~dG~af~aLih~~~P~lid~~~l~~~----~~~~n~~~af~~Ae~~ 77 (116)
T 1wyl_A 8 TQEELLRWCQEQTAGYP-GVHVSDLS-SSWADGLALCALVYRLQPGLLEPSELQGL----GALEATAWALKVAENE 77 (116)
T ss_dssp SHHHHHHHHHHHHHHST-TCCCSCTT-TTTTSSHHHHHHHHHHCTTSCCCSSGGGC----CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCC-CCCCCCcc-ccccccHHHHHHHHHHCcCCCCHHHhccC----CHHHHHHHHHHHHHHH
Confidence 45679999999999984 68999999 89999999999999999999999998764 7889999999999974
No 35
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=99.75 E-value=7.6e-19 Score=148.58 Aligned_cols=73 Identities=16% Similarity=0.266 Sum_probs=64.9
Q ss_pred CCCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCCCCccchhhhHHHhhhcccccc
Q 035967 295 EITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNSS 373 (381)
Q Consensus 295 ~~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~~ 373 (381)
...++.||+|||+++++|+ +++|+||+ +||+||+|||||||+++|++|||+.+.+. +..+|+++||++|++..
T Consensus 6 ~s~k~~LL~W~q~~~~~y~-~v~V~nFs-~sw~DG~Af~aLih~~~P~lid~~~l~~~----~~~~n~~~af~~Ae~~L 78 (127)
T 1wyq_A 6 SGAKDALLLWCQMKTAGYP-NVNVHNFT-TSWRDGLAFNAIVHKHRPDLLDFESLKKC----NAHYNLQNAFNLAEKEL 78 (127)
T ss_dssp CCSTHHHHHHHHHHHHTSS-SCCCSCSS-TTSSSSHHHHHHHHHHCTTTCCTTTSCSS----CCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhcCC-CCCCCCCc-ccccccHHHHHHHHHHCcCcCCHHHhCcC----CHHHHHHHHHHHHHHHc
Confidence 3345679999999999994 68999999 99999999999999999999999998764 78899999999998643
No 36
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=99.75 E-value=1.7e-19 Score=153.40 Aligned_cols=73 Identities=8% Similarity=-0.046 Sum_probs=69.0
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHH
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLL 74 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l 74 (381)
+|++.+.|++++++++|++ |.+|+|++||++.||+|+++.||+++||+|+||+||++++|||||||||++|+.
T Consensus 57 ~Lle~ls~~~~~~~~~~~~-p~~r~~kieNv~~aL~~lk~~gi~l~~I~~~DIvdGn~kliLgLiW~li~~~~~ 129 (131)
T 2vzc_A 57 LLMGLLEGYFVPLHSFFLT-PDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRN 129 (131)
T ss_dssp HHHHHHTTCCCCTTSSCSS-CCSHHHHHHHHHHHHHHHHHTTCCCCSSCHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCCCHHHhcCC-CCcHHHHHHHHHHHHHHHHHcCCCcCCCCHHHhhCCCHHhHHHHHHHHHHHHhc
Confidence 3678899999999999976 689999999999999999999999999999999999999999999999999974
No 37
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=99.75 E-value=9.6e-19 Score=148.11 Aligned_cols=70 Identities=20% Similarity=0.349 Sum_probs=63.4
Q ss_pred HHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCCCCccchhhhHHHhhhcccccc
Q 035967 298 DADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNSS 373 (381)
Q Consensus 298 ~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~~ 373 (381)
++.||+|||+++++|+ +++|+||+ +||+||+|||||||+++|++|||+.+.+. +..+|+++||++|++-.
T Consensus 9 k~~LL~W~q~~~~~y~-~v~V~nFs-~sw~DG~af~aLih~~~P~lid~~~l~~~----~~~~n~~~af~~Ae~~l 78 (128)
T 2d87_A 9 KQMLLDWCRAKTRGYE-HVDIQNFS-SSWSDGMAFCALVHNFFPEAFDYGQLSPQ----NRRQNFEVAFSSAETHA 78 (128)
T ss_dssp HHHHHHHHHHHSSSCT-TCCCSCTT-TTTTSSHHHHHHHHHHCTTTSCSTTSCSS----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCC-CCCCCCcc-ccccccHHHHHHHHHHCcCcCCHHHcCcc----CHHHHHHHHHHHHHHcC
Confidence 4559999999999994 68999999 89999999999999999999999998654 78899999999999843
No 38
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=99.75 E-value=4.2e-19 Score=148.96 Aligned_cols=69 Identities=9% Similarity=0.261 Sum_probs=63.3
Q ss_pred HHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCCCCccchhhhHHHhhhccccc
Q 035967 298 DADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNS 372 (381)
Q Consensus 298 ~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~ 372 (381)
++.||+|||+++++|+ +++|+||+ +||+||+|||||||+++|++|||+.+.+. +..+|+++||++||+.
T Consensus 11 ~~~LL~W~q~~~~~y~-~v~v~nFs-~sw~DG~af~aLih~~~P~lid~~~l~~~----~~~~n~~~af~~Ae~~ 79 (121)
T 2d88_A 11 SSKLLGWCQRQTDGYA-GVNVTDLT-MSWKSGLALCAIIHRYRPDLIDFDSLDEQ----NVEKNNQLAFDIAEKE 79 (121)
T ss_dssp SCHHHHHHHHHSTTSS-SCCCCCSS-HHHHTSHHHHHHHHHHCTTTSCTTTSCTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCC-CCCCCCch-hhccccHHHHHHHHHhCcCcCCHHHcCcc----CHHHHHHHHHHHHHHH
Confidence 4679999999999984 68999999 89999999999999999999999998754 7889999999999974
No 39
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=99.75 E-value=6.7e-19 Score=145.11 Aligned_cols=70 Identities=19% Similarity=0.325 Sum_probs=63.4
Q ss_pred HHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCCCCccchhhhHHHhhhcccccc
Q 035967 298 DADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNSS 373 (381)
Q Consensus 298 ~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~~ 373 (381)
++.||+|||+++++|+ +++|+||+ +||+||+|||||||+++|++|||+.+.+. +..+|+++||++||+..
T Consensus 5 k~~LL~W~q~~~~~y~-~v~v~nFs-~sw~dG~af~aLih~~~P~lid~~~l~~~----~~~~n~~~af~~Ae~~l 74 (109)
T 1bkr_A 5 KDALLLWCQMKTAGYP-NVNIHNFT-TSWRDGMAFNALIHKHRPDLIDFDKLKKS----NAHYNLQNAFNLAEQHL 74 (109)
T ss_dssp HHHHHHHHHHHTTTCT-TCCCSSSS-GGGTTSHHHHHHHHHHCGGGCCGGGCCTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCC-CCCCCCCc-ccccccHHHHHHHHHHCcCCCCHHHcCcC----CHHHHHHHHHHHHHHHc
Confidence 3569999999999995 68999999 99999999999999999999999999754 78899999999998643
No 40
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=7.3e-19 Score=147.14 Aligned_cols=69 Identities=13% Similarity=0.272 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCCCCccchhhhHHHhhhccc
Q 035967 296 ITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVTGMFSSNHTRCAVTLIG 370 (381)
Q Consensus 296 ~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~~~~~~~~~n~~~a~~~a~ 370 (381)
..++.||+|||+++++|+ +++|+||+ +||+||+|||||||+++|++|||+.+.+. +.++|+++||++|+
T Consensus 9 ~~~~~LL~W~~~~~~~y~-~v~v~nFs-~sw~dG~af~aLi~~~~P~lid~~~l~~~----~~~~n~~~af~~a~ 77 (119)
T 2d89_A 9 NASQSLLVWCKEVTKNYR-GVKITNFT-TSWRNGLSFCAILHHFRPDLIDYKSLNPQ----DIKENNKKAYDGFA 77 (119)
T ss_dssp CCHHHHHHHHHHHTTTCS-SCCCCCSS-HHHHTTHHHHHHHHHHCTTTSCGGGCCTT----CSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccCC-CCCCCCcc-ccccccHHHHHHHHHHCcCcCChhhhccc----CHHHHHHHHHHHHH
Confidence 346679999999999984 68999999 89999999999999999999999999764 78899999999985
No 41
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=99.73 E-value=7e-19 Score=146.97 Aligned_cols=70 Identities=21% Similarity=0.321 Sum_probs=63.4
Q ss_pred HHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCCCCccchhhhHHHhhhcccccc
Q 035967 298 DADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVTGMFSSNHTRCAVTLIGNSS 373 (381)
Q Consensus 298 ~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~~~~~~~~~n~~~a~~~a~~~~ 373 (381)
++.||+|||+++++|+ +++|+||+ +||+||+|||||||+++|++|||+.+.+. +..+|+++||++|++..
T Consensus 10 ~~~LL~W~q~~~~~y~-~v~v~nFs-~sw~DG~af~aLih~~~P~lid~~~l~~~----~~~~n~~~af~~Ae~~l 79 (118)
T 1bhd_A 10 EKILLSWVRQTTRPYS-QVNVLNFT-TSWTDGLAFNAVLHRHKPDLFSWDKVVKM----SPIERLEHAFSKAQTYL 79 (118)
T ss_dssp HHHHHHHHHHHHTTST-TCCCCSSS-GGGTTSHHHHHHHHHHCGGGSCHHHHHHS----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCC-CCCCCCCc-ccccCcHHHHHHHHHHCcCcCCHHHhCcC----CHHHHHHHHHHHHHHHc
Confidence 4569999999999994 68999999 99999999999999999999999998754 78899999999998653
No 42
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=3.4e-17 Score=138.91 Aligned_cols=71 Identities=23% Similarity=0.320 Sum_probs=66.6
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCccchhHHHHHHHHHHHHH
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQLL 74 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~~~liLgLIWqII~~~~l 74 (381)
||+|...|++|+ ++|++ |.+|+|++||++.||+|+++.||+++||+++||+|||+++||||||+|+|+|+.
T Consensus 55 ~Lle~L~~~~l~--~~~~~-p~~~~~~~eNv~~aL~~~~~~gv~~~~i~~~DI~dgn~~~iL~Llw~L~r~~q~ 125 (129)
T 2yrn_A 55 QIIQVVANEKIE--DINGC-PKNRSQMIENIDACLNFLAAKGINIQGLSAEEIRNGNLKAILGLFFSLSRYKQQ 125 (129)
T ss_dssp HHHHHHTTCCCT--TCCSS-CCSTTHHHHHHHHHHHHHHHHTCCCTTCCHHHHHHTCHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHhcCCcc--cccCC-CCcHHHHHHHHHHHHHHHHHhCCcccCCChhhhhcCCHhHHHHHHHHHHHHHhh
Confidence 578999999998 78865 689999999999999999999999999999999999999999999999999874
No 43
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=98.87 E-value=9.7e-09 Score=89.75 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCccccccc
Q 035967 103 PEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTAK 182 (381)
Q Consensus 103 ~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~pe 182 (381)
.++.+..|++..++.. .+ .-.+|.+.++||++||.|++.+.|+.+.
T Consensus 12 ~~~e~~~WIe~~l~~~-l~-~~~~l~~~LkdGvvLCkL~N~l~P~~i~-------------------------------- 57 (159)
T 1p2x_A 12 RVDEAKKWIEECLGTD-LG-PTSTFEQSLRNGVVLALLVQKFQPDKLI-------------------------------- 57 (159)
T ss_dssp HHHHHHHHHHHHHTSC-CC-CGGGHHHHTTTSHHHHHHHHHHCTTSCC--------------------------------
T ss_pred HHHHHHHHHHHHhCCC-CC-ChHHHHHHHcchHHHHHHHHHhCCCCcc--------------------------------
Confidence 3466889999988632 21 2358999999999999999999998752
Q ss_pred ccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeec-CCCccc
Q 035967 183 DIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNI-AGNDIV 261 (381)
Q Consensus 183 DI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni-~~~dI~ 261 (381)
+++.++ ++.|+++||++..++.++.+|+.-+.+ ...|++
T Consensus 58 ---------------------------------------kI~~~~-~~~f~~~eNI~~FL~a~~~~Gv~~~~lF~~~DL~ 97 (159)
T 1p2x_A 58 ---------------------------------------KIFYSN-ELQFRHSDNINKFLDFIHGIGLPEIFHFELTDIY 97 (159)
T ss_dssp ---------------------------------------CCCCCS-SCCTTHHHHHHHHHHHHHHTTCCGGGCCCHHHHS
T ss_pred ---------------------------------------cccccc-CCcchHHHHHHHHHHHHHHcCCCcccccCHHHHH
Confidence 223222 457999999999999999999988777 899999
Q ss_pred CCcc--hhHHHHHHHHHHHHHHHhhhhccccC---CC-CCCCHHHHHHHHHhhhccCCCccccCCCC
Q 035967 262 QGNK--KLILALLWQMMRYNVLQLLKNLRFHS---HG-KEITDADILQWANAKVRISGSQSHMNSFK 322 (381)
Q Consensus 262 dgn~--kliLgLiW~li~~~~~~~~~~~~~~~---~~-~~~~~~~lL~W~~~~~~~~~~~~~i~nF~ 322 (381)
+|.. +.+..|.. |.++-... ..+... .+ ...|+++ |+|++..+..+| +++.||+
T Consensus 98 e~kn~~~Vi~~L~a-L~~~~~~~---g~~p~~~~~~~~~~fseeq-l~~~~~~l~~~g--~~~~~f~ 157 (159)
T 1p2x_A 98 EGKNLPKVIYCIHA-LSYFLSMQ---DLAPPLIKSDENLSFTDED-VSIIVRRLRQSN--VILPNFK 157 (159)
T ss_dssp SCSCHHHHHHHHHH-HHHHHHTT---TSSCCCCCCCTTCCCCHHH-HHHHHHHHHHCC--CCCCCGG
T ss_pred hcCCHHHHHHHHHH-HHHHHhhC---CCCCCchhhhccCCCCHHH-HHHHHHHHHHcC--CCCCCcC
Confidence 9874 22222221 22221100 011110 01 2457777 999999999886 6799997
No 44
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=98.83 E-value=7.1e-09 Score=94.06 Aligned_cols=141 Identities=19% Similarity=0.252 Sum_probs=98.4
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTA 181 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~p 181 (381)
..++.+..|++..+... .+ ...+|.+.++||++||.|++.+.|+.+.
T Consensus 55 ~~~~e~~~WIe~~l~~~-l~-~~~~f~~~LrDGvvLCkLiN~l~P~sv~------------------------------- 101 (203)
T 1p5s_A 55 CRVDEAKKWIEECLGTD-LG-PTSTFEQSLRNGVVLALLVQKFQPDKLI------------------------------- 101 (203)
T ss_dssp HHHHHHHHHHHHHHTSC-CC-CGGGHHHHHTTSHHHHHHHHHHCTTSCC-------------------------------
T ss_pred HHHHHHHHHHHHHhCCC-CC-ChHHHHHHHcchHHHHHHHHHhCCCCcc-------------------------------
Confidence 34677899999988632 21 3468999999999999999999998652
Q ss_pred cccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeec-CCCcc
Q 035967 182 KDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNI-AGNDI 260 (381)
Q Consensus 182 eDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni-~~~dI 260 (381)
+++.++ ++.|+++||++..++.++.+|+.-+.+ .+.|+
T Consensus 102 ----------------------------------------kI~~~s-~~~f~~~eNI~~FL~ac~~~Gvp~~~lF~t~DL 140 (203)
T 1p5s_A 102 ----------------------------------------KIFYSN-ELQFRHSDNINKFLDFIHGIGLPEIFHFELTDI 140 (203)
T ss_dssp ----------------------------------------CCCCCS-SSCCCHHHHHHHHHHHHHHTTCCGGGCCCHHHH
T ss_pred ----------------------------------------cccCCC-CCcchHHHHHHHHHHHHHHcCCCcccccCHHHH
Confidence 222222 457999999999999999999988885 99999
Q ss_pred cCCcc--hh---HHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHHHHHhhhccCCCccccCCCC
Q 035967 261 VQGNK--KL---ILALLWQMMRYNVLQLLKNLRFHSHGKEITDADILQWANAKVRISGSQSHMNSFK 322 (381)
Q Consensus 261 ~dgn~--kl---iLgLiW~li~~~~~~~~~~~~~~~~~~~~~~~~lL~W~~~~~~~~~~~~~i~nF~ 322 (381)
++|.. +. +++|.+...++..-..+.++ .+..+.++++|.+ +|+.+..+| .++.||+
T Consensus 141 ~e~kn~~~Vi~~L~aL~~~a~~~g~~p~l~~l---~~~~~Fseeql~~-~n~~l~q~G--~~~~~F~ 201 (203)
T 1p5s_A 141 YEGKNLPKVIYCIHALSYFLSMQDLAPPLIKS---DENLSFTDEDVSI-IVRRLRQSN--VILPNFK 201 (203)
T ss_dssp HSCSCHHHHHHHHHHHHHHHHHTTSSCCCCCC---CTTCCCCHHHHHH-HHHHHHHCC--CCCCCST
T ss_pred HhcCCHHHHHHHHHHHHHHHhhcCCCCchhhh---cccCCCCHHHHHH-HHHHHHHcC--CCCCCCC
Confidence 99875 22 22333322211110011111 0124578898888 899998876 6799997
No 45
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=98.60 E-value=2.8e-08 Score=86.85 Aligned_cols=111 Identities=19% Similarity=0.215 Sum_probs=76.1
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEecc-CCCcccCCcc-chhHHHHHHHHHHHHHHhcc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNI-GTQDFIEGRR-HLVLGVISQIIKIQLLADLN 78 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI-~~~dI~dg~~-~liLgLIWqII~~~~l~~i~ 78 (381)
||+|.+.||+| ++||++ +.+.|++.||++..|++|++.||.-+++ .+.|+++|.. .-|+--+-.+.+... +..
T Consensus 46 kL~N~l~P~~i--~kI~~~-~~~~f~~~eNI~~FL~a~~~~Gv~~~~lF~~~DL~e~kn~~~Vi~~L~aL~~~~~--~~g 120 (159)
T 1p2x_A 46 LLVQKFQPDKL--IKIFYS-NELQFRHSDNINKFLDFIHGIGLPEIFHFELTDIYEGKNLPKVIYCIHALSYFLS--MQD 120 (159)
T ss_dssp HHHHHHCTTSC--CCCCCC-SSCCTTHHHHHHHHHHHHHHTTCCGGGCCCHHHHSSCSCHHHHHHHHHHHHHHHH--TTT
T ss_pred HHHHHhCCCCc--cccccc-cCCcchHHHHHHHHHHHHHHcCCCcccccCHHHHHhcCCHHHHHHHHHHHHHHHh--hCC
Confidence 58999999999 789864 5779999999999999999999998886 8999999874 122212222222211 111
Q ss_pred cccCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccc
Q 035967 79 LKKTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSS 129 (381)
Q Consensus 79 ~~~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~ 129 (381)
.-|.+..+. .....+.|+ |+|++++++++|. .+.||+.
T Consensus 121 --~~p~~~~~~-------~~~~fseeq--l~~~~~~l~~~g~--~~~~f~~ 158 (159)
T 1p2x_A 121 --LAPPLIKSD-------ENLSFTDED--VSIIVRRLRQSNV--ILPNFKA 158 (159)
T ss_dssp --SSCCCCCCC-------TTCCCCHHH--HHHHHHHHHHCCC--CCCCGGG
T ss_pred --CCCCchhhh-------ccCCCCHHH--HHHHHHHHHHcCC--CCCCcCC
Confidence 112222110 112346666 8999999998886 4999973
No 46
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=98.21 E-value=5.5e-07 Score=81.60 Aligned_cols=111 Identities=20% Similarity=0.255 Sum_probs=74.3
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEec-cCCCcccCCcc-chhHHHHHHHHHHHHHHhcc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVN-IGTQDFIEGRR-HLVLGVISQIIKIQLLADLN 78 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvn-I~~~dI~dg~~-~liLgLIWqII~~~~l~~i~ 78 (381)
||+|.+.||+| ++|+.+ +.+.|++.||++..|++|++.||.-++ +.+.|++||+. .-|+-.|-.+.+... +..
T Consensus 90 kLiN~l~P~sv--~kI~~~-s~~~f~~~eNI~~FL~ac~~~Gvp~~~lF~t~DL~e~kn~~~Vi~~L~aL~~~a~--~~g 164 (203)
T 1p5s_A 90 LLVQKFQPDKL--IKIFYS-NELQFRHSDNINKFLDFIHGIGLPEIFHFELTDIYEGKNLPKVIYCIHALSYFLS--MQD 164 (203)
T ss_dssp HHHHHHCTTSC--CCCCCC-SSSCCCHHHHHHHHHHHHHHTTCCGGGCCCHHHHHSCSCHHHHHHHHHHHHHHHH--HTT
T ss_pred HHHHHhCCCCc--ccccCC-CCCcchHHHHHHHHHHHHHHcCCCcccccCHHHHHhcCCHHHHHHHHHHHHHHHh--hcC
Confidence 58999999999 788754 567899999999999999999999988 59999999874 222222222222211 111
Q ss_pred cccCcccccccCCCchhhhhhCCChHHHHHHHHHHHhhhcCCccccccccc
Q 035967 79 LKKTPQLLQLVDDSKDVEELMSLPPEKILLRWMNFHLKKAGYKKIVTNFSS 129 (381)
Q Consensus 79 ~~~~p~l~~l~~~~e~~~~~~~~s~e~~LL~Wvn~~l~~~g~~~~I~nF~~ 129 (381)
. .|.+..+. ...+.+.|++.. +|+++..+|. .+.||+.
T Consensus 165 ~--~p~l~~l~-------~~~~Fseeql~~--~n~~l~q~G~--~~~~F~~ 202 (203)
T 1p5s_A 165 L--APPLIKSD-------ENLSFTDEDVSI--IVRRLRQSNV--ILPNFKA 202 (203)
T ss_dssp S--SCCCCCCC-------TTCCCCHHHHHH--HHHHHHHCCC--CCCCSTT
T ss_pred C--CCchhhhc-------ccCCCCHHHHHH--HHHHHHHcCC--CCCCCCC
Confidence 1 13222221 012345666554 9999988886 4899973
No 47
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=98.15 E-value=9.1e-07 Score=72.19 Aligned_cols=84 Identities=25% Similarity=0.397 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccccc
Q 035967 104 EKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTAKD 183 (381)
Q Consensus 104 e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~peD 183 (381)
++.+..|++..++.. --.+|.+.++||+.||.|++.+.|+.++
T Consensus 5 e~e~~~WIe~~l~~~----~~~~l~~~L~dGvvLCkL~N~l~P~~v~--------------------------------- 47 (108)
T 1h67_A 5 ERQLRVWIEGATGRR----IGDNFMDGLKDGVILCELINKLQPGSVQ--------------------------------- 47 (108)
T ss_dssp SHHHHHHHHHHHSCC----CCSCHHHHHHHCSHHHHHHHHHSTTSST---------------------------------
T ss_pred HHHHHHHHHHHhCCC----CcHHHHHHHccHHHHHHHHHHhCCCCcc---------------------------------
Confidence 456899999988632 1358989999999999999999998763
Q ss_pred cccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeee-cCCCcccC
Q 035967 184 IVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVN-IAGNDIVQ 262 (381)
Q Consensus 184 I~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvn-i~~~dI~d 262 (381)
+++.+ ++.|++.||++..++.++.+|+.-++ .++.|+++
T Consensus 48 --------------------------------------ki~~~--~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF~~~DL~e 87 (108)
T 1h67_A 48 --------------------------------------KVNDP--VQNWHKLENIGNFLRAIKHYGVKPHDIFEANDLFE 87 (108)
T ss_dssp --------------------------------------TCCCT--TSSHHHHHHHHHHHHHHHHHTSCGGGSCCHHHHHH
T ss_pred --------------------------------------ccccc--ccchHHHHHHHHHHHHHHHcCCCcccccChhHHHh
Confidence 12222 34799999999999999999998776 88999998
Q ss_pred Cc
Q 035967 263 GN 264 (381)
Q Consensus 263 gn 264 (381)
|.
T Consensus 88 ~k 89 (108)
T 1h67_A 88 NT 89 (108)
T ss_dssp TC
T ss_pred CC
Confidence 75
No 48
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=98.13 E-value=3.4e-06 Score=75.77 Aligned_cols=98 Identities=17% Similarity=0.212 Sum_probs=70.4
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTA 181 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~p 181 (381)
...+.+..|++..+... .+ .-.+|...++||++||.|++.+.|+.++...+..
T Consensus 47 ~~~~e~~~WIe~~lg~~-l~-~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~------------------------- 99 (193)
T 3i6x_A 47 CHLEEAKRWMEACLGED-LP-PTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYD------------------------- 99 (193)
T ss_dssp HHHHHHHHHHHHHHSSC-CC-CGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTT-------------------------
T ss_pred HHHHHHHHHHHHHhCCC-CC-ChHHHHHHhccHHHHHHHHHHHCCCCCCccccCC-------------------------
Confidence 34446889999988632 21 2358999999999999999999998765211100
Q ss_pred cccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeec-CCCcc
Q 035967 182 KDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNI-AGNDI 260 (381)
Q Consensus 182 eDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni-~~~dI 260 (381)
.|+ +. ++. + ++.|+++||++..+++++.+|+.-+.+ .+.|+
T Consensus 100 --------------------------------~~~-~~---~~~-~-~~~F~~~eNI~~FL~ac~~~Gvp~~~lFet~DL 141 (193)
T 3i6x_A 100 --------------------------------REQ-TR---YKA-T-GLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDI 141 (193)
T ss_dssp --------------------------------TTC-HH---HHH-S-CCCGGGHHHHHHHHHHHHHHTCCGGGCCCHHHH
T ss_pred --------------------------------ccc-cc---ccC-c-ccchHHHHHHHHHHHHHHHcCCCcccCCCcHHH
Confidence 000 00 111 1 457999999999999999999987766 89999
Q ss_pred cCCc
Q 035967 261 VQGN 264 (381)
Q Consensus 261 ~dgn 264 (381)
++|.
T Consensus 142 ~e~k 145 (193)
T 3i6x_A 142 YDRK 145 (193)
T ss_dssp HSCS
T ss_pred hcCC
Confidence 9985
No 49
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=98.10 E-value=3.1e-06 Score=71.87 Aligned_cols=86 Identities=21% Similarity=0.344 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCccccccc
Q 035967 103 PEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTAK 182 (381)
Q Consensus 103 ~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~pe 182 (381)
.+..+..|++..+... --.+|.+.++||+.||.|++.+.|+.+.
T Consensus 18 ~~~e~~~WIe~~l~~~----~~~~l~~~L~DGvvLCkL~N~l~P~~v~-------------------------------- 61 (136)
T 1wyp_A 18 REQELREWIEGVTGRR----IGNNFMDGLKDGIILCEFINKLQPGSVK-------------------------------- 61 (136)
T ss_dssp HHHHHHHHHHHHTCCC----CCSCTTHHHHTSHHHHHHHHHHSTTSSS--------------------------------
T ss_pred HHHHHHHHHHHHhCCC----CcHHHHHHHccHHhHHHHHHhhCCCCcc--------------------------------
Confidence 3578999999988532 1358999999999999999999998752
Q ss_pred ccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeee-cCCCccc
Q 035967 183 DIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVN-IAGNDIV 261 (381)
Q Consensus 183 DI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvn-i~~~dI~ 261 (381)
+++.+ .+.|+++||++..++.++.+|+.-++ ..+.|++
T Consensus 62 ---------------------------------------ki~~~--~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF~~~DL~ 100 (136)
T 1wyp_A 62 ---------------------------------------KINES--TQNWHQLENIGNFIKAITKYGVKPHDIFEANDLF 100 (136)
T ss_dssp ---------------------------------------CCCCS--SCSHHHHHHHHHHHHHHHHHTCCGGGCCCHHHHH
T ss_pred ---------------------------------------ccccc--ccchHHHHHHHHHHHHHHHcCCCcccccCchHHh
Confidence 23322 34799999999999999999998776 8899999
Q ss_pred CCcc
Q 035967 262 QGNK 265 (381)
Q Consensus 262 dgn~ 265 (381)
+|..
T Consensus 101 e~kn 104 (136)
T 1wyp_A 101 ENTN 104 (136)
T ss_dssp SCSC
T ss_pred cCCC
Confidence 9763
No 50
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=98.00 E-value=7e-06 Score=68.30 Aligned_cols=89 Identities=20% Similarity=0.256 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHhhhcCCcccc---cc-ccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCccc
Q 035967 103 PEKILLRWMNFHLKKAGYKKIV---TN-FSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRY 178 (381)
Q Consensus 103 ~e~~LL~Wvn~~l~~~g~~~~I---~n-F~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~ 178 (381)
.+..+.+|++..+.......++ .+ |.+.++||+.||.|++.+.|+.++
T Consensus 7 ~e~e~~~WI~~~~~l~~~~~~~~~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~---------------------------- 58 (121)
T 1wyr_A 7 GEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVE---------------------------- 58 (121)
T ss_dssp SHHHHHHHHHHHTSSCCCSSCCSCHHHHHHHHHHHSHHHHHHHHHHSTTCCS----------------------------
T ss_pred HHHHHHHHHHHhcCcCCcccCCCCcHHHHHHHHccHHHHHHHHHHhCCCCCC----------------------------
Confidence 4677899999975311111111 23 578899999999999999998764
Q ss_pred ccccccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeecCCC
Q 035967 179 LTAKDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNIAGN 258 (381)
Q Consensus 179 L~peDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni~~~ 258 (381)
+++..| ++.|+++||++..++.++.+|+ ......
T Consensus 59 -------------------------------------------ki~~~~-~~~f~~~eNI~~FL~a~~~~g~--~~F~~~ 92 (121)
T 1wyr_A 59 -------------------------------------------KFCLDP-QTEADCINNINDFLKGCATLQV--EIFDPD 92 (121)
T ss_dssp -------------------------------------------CCCSSC-CSHHHHHHHHHHHHHHHHHHTC--CCCCHH
T ss_pred -------------------------------------------cCCCCC-cchHHHHHHHHHHHHHHHHcCC--CccCHH
Confidence 123223 4579999999999999999887 579999
Q ss_pred cccCCcc
Q 035967 259 DIVQGNK 265 (381)
Q Consensus 259 dI~dgn~ 265 (381)
|+++|..
T Consensus 93 DL~e~kn 99 (121)
T 1wyr_A 93 DLYSGVN 99 (121)
T ss_dssp HHHTCSC
T ss_pred HHHcCCC
Confidence 9999853
No 51
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=98.00 E-value=4.2e-06 Score=71.92 Aligned_cols=86 Identities=21% Similarity=0.334 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCccccccc
Q 035967 103 PEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTAK 182 (381)
Q Consensus 103 ~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~pe 182 (381)
.+..+..|++..+... . -.+|.+.++||++||.|++.+.|+.+.
T Consensus 18 ~~~e~~~WIe~~l~~~-i---~~~l~~~L~DGvvLCkL~N~l~P~~v~-------------------------------- 61 (146)
T 1wyn_A 18 KEAELRTWIEGLTGLS-I---GPDFQKGLKDGTILCTLMNKLQPGSVP-------------------------------- 61 (146)
T ss_dssp HHHHHHHHHHHHHCCC-C---CSCHHHHHHTTSHHHHHHHHHCTTSCS--------------------------------
T ss_pred HHHHHHHHHHHHhCCC-C---cHHHHHHHccHHHHHHHHHHhCCCCcc--------------------------------
Confidence 4678999999988532 1 357888999999999999999998752
Q ss_pred ccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeee-cCCCccc
Q 035967 183 DIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVN-IAGNDIV 261 (381)
Q Consensus 183 DI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvn-i~~~dI~ 261 (381)
+++.+ .+.|+++||++..++.++.+|+.-++ ..+.|++
T Consensus 62 ---------------------------------------kin~~--~~~f~~~eNI~~FL~a~~~~Gv~~~~lF~~~DL~ 100 (146)
T 1wyn_A 62 ---------------------------------------KINRS--MQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLF 100 (146)
T ss_dssp ---------------------------------------CCCCS--SCHHHHHHHHHHHHHHHHHHTCCSSSCCCHHHHH
T ss_pred ---------------------------------------ccccc--cccccHHHHHHHHHHHHHHcCCCcccccChhHHH
Confidence 12322 35799999999999999999998776 8899999
Q ss_pred CCcc
Q 035967 262 QGNK 265 (381)
Q Consensus 262 dgn~ 265 (381)
+|.-
T Consensus 101 e~kn 104 (146)
T 1wyn_A 101 ESGN 104 (146)
T ss_dssp TCSC
T ss_pred hcCC
Confidence 9763
No 52
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.99 E-value=2.7e-05 Score=67.38 Aligned_cols=102 Identities=19% Similarity=0.323 Sum_probs=80.6
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCC-----CcCCCCCHHHHHHHHHHhHHhhCCc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNP-----STLAVKNPLQRAKLILEHADRMGCR 176 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~-----~~~~~~d~~~na~~a~~~Ae~Lgi~ 176 (381)
..+..+|.|+|..|.. .++.. ++++||.+||.|++.+.|+.++. ++-.+-+..+|.+...++.+++||+
T Consensus 22 ~sr~ElL~WIN~~L~~-----~~~ki-E~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~af~k~gV~ 95 (159)
T 1wyo_A 22 LSRHDMLAWVNDSLHL-----NYTKI-EQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVD 95 (159)
T ss_dssp CCHHHHHHHHHHHSCC-----CCSSG-GGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHHHHHHHTCC
T ss_pred hhHHHHHHHHHHHHCC-----CCchh-hhcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHHHHHHcCCC
Confidence 4677899999998852 23333 58999999999999999998874 3334567889999999999999999
Q ss_pred ccccccccccCCCchhHHHHHHHhhhHHHHHHhhcccCCC
Q 035967 177 RYLTAKDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPG 216 (381)
Q Consensus 177 ~~L~peDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg 216 (381)
+.++.+.++.++..-++-|+--+.. .||+..+|
T Consensus 96 k~ipV~kLvkgk~qdNlEFlqWfk~-------f~d~n~~~ 128 (159)
T 1wyo_A 96 KIIPVEKLVKGKFQDNFEFIQWFKK-------FFDANYDG 128 (159)
T ss_dssp CCCCHHHHTTTCSHHHHHHHHHHHH-------HHHTTCCS
T ss_pred CccCHHHHhcCCchhHHHHHHHHHH-------HHHHcCCC
Confidence 9999999999998777777644333 45666665
No 53
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=97.93 E-value=3.3e-05 Score=64.24 Aligned_cols=93 Identities=22% Similarity=0.357 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCC-----cCCCCCHHHHHHHHHHhHHhhCCc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPS-----TLAVKNPLQRAKLILEHADRMGCR 176 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~-----~~~~~d~~~na~~a~~~Ae~Lgi~ 176 (381)
.....++.|+|..+.. .++.. ++++||.+||.|++.+.|+.++.. +-.+-+..+|.+...++.+++||+
T Consensus 5 ~sr~ElL~WIN~~L~~-----~~~ki-E~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af~k~gV~ 78 (123)
T 2qjz_A 5 LSRHDMLAWINESLQL-----NLTKI-EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVD 78 (123)
T ss_dssp CCHHHHHHHHHHHHTC-----CCCCG-GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccHHHHHHHHHHHHCC-----CCchH-HHcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHHHHcCCC
Confidence 3567799999998852 23333 589999999999999999998743 333456788999999999999999
Q ss_pred ccccccccccCCCchhHHHHHHHh
Q 035967 177 RYLTAKDIVEGSPNLNLAFVAHIF 200 (381)
Q Consensus 177 ~~L~peDI~~~~~k~il~~va~lf 200 (381)
+.++.+.++.+...-++-|+--+.
T Consensus 79 k~i~v~kLvkgk~qdnleflqW~k 102 (123)
T 2qjz_A 79 KIIPVDKLVKGKFQDNFEFVQWFK 102 (123)
T ss_dssp CCCCHHHHTTCCHHHHHHHHHHHH
T ss_pred CccCHHHHHcCCchhHHHHHHHHH
Confidence 999999999999877766654333
No 54
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=97.85 E-value=1e-05 Score=70.12 Aligned_cols=89 Identities=22% Similarity=0.439 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHhhhcCCcc---ccccccccccchHHHHHHHHHhCC---CCCCCCcCCCCCHHHHHHHHHHhHHhhCCc
Q 035967 103 PEKILLRWMNFHLKKAGYKK---IVTNFSSDIKDGEAYANLLNVLAP---EHSNPSTLAVKNPLQRAKLILEHADRMGCR 176 (381)
Q Consensus 103 ~e~~LL~Wvn~~l~~~g~~~---~I~nF~~d~~DG~~l~aLl~~~~p---~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~ 176 (381)
.+..+..|++..+... .+. ...+|.+.++||+.||.|++.+.| +.++
T Consensus 18 ~e~e~~~WIe~~l~~~-l~~~~~~~~~~~~~LkDGvvLCkL~N~l~P~~~~~i~-------------------------- 70 (155)
T 1wym_A 18 LEQILIQWITTQCRKD-VGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVK-------------------------- 70 (155)
T ss_dssp HHHHHHHHHHHHSSSC-CCCCCSSHHHHHHHHHTSHHHHHHHHHHSCTTTCSCC--------------------------
T ss_pred HHHHHHHHHHHHhCCC-CCCCcccHHHHHHHHcchHHHHHHHHHhccccCCCcC--------------------------
Confidence 3668999999988632 110 125898999999999999999999 5543
Q ss_pred ccccccccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeec-
Q 035967 177 RYLTAKDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNI- 255 (381)
Q Consensus 177 ~~L~peDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni- 255 (381)
+++.+ ++.|+++||++..++.++.+|+.-+.+
T Consensus 71 ---------------------------------------------kIn~~--~~~F~~~eNI~~FL~ac~~~Gv~~~~lF 103 (155)
T 1wym_A 71 ---------------------------------------------KIQAS--TMAFKQMEQISQFLQAAERYGINTTDIF 103 (155)
T ss_dssp ---------------------------------------------CCCCC--CCHHHHHHHHHHHHHHHHHHTCCTTTCC
T ss_pred ---------------------------------------------cccCC--CccccHHHHHHHHHHHHHHcCCCccccC
Confidence 23322 468999999999999999999988877
Q ss_pred CCCcccCCcc
Q 035967 256 AGNDIVQGNK 265 (381)
Q Consensus 256 ~~~dI~dgn~ 265 (381)
...|+++|.-
T Consensus 104 ~t~DL~e~kn 113 (155)
T 1wym_A 104 QTVDLWEGKN 113 (155)
T ss_dssp CHHHHHTCSC
T ss_pred ChHHHHhcCC
Confidence 8999999864
No 55
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=97.84 E-value=2.1e-05 Score=67.33 Aligned_cols=90 Identities=21% Similarity=0.347 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHHhhhcCCc---cccccccccccchHHHHHHHHHhCCC---CCCCCcCCCCCHHHHHHHHHHhHHhhCCc
Q 035967 103 PEKILLRWMNFHLKKAGYK---KIVTNFSSDIKDGEAYANLLNVLAPE---HSNPSTLAVKNPLQRAKLILEHADRMGCR 176 (381)
Q Consensus 103 ~e~~LL~Wvn~~l~~~g~~---~~I~nF~~d~~DG~~l~aLl~~~~p~---~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~ 176 (381)
.++.+..|++..+... .+ ..-.+|.+.++||+.||.|++.+.|. .++.
T Consensus 10 ~e~e~~~WIe~~l~~~-l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~~------------------------- 63 (144)
T 1ujo_A 10 LEERLVEWIVVQCGPD-VGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVKV------------------------- 63 (144)
T ss_dssp HHHHHHHHHHHHHCTT-TCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSCC-------------------------
T ss_pred HHHHHHHHHHHHhCCC-CCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcce-------------------------
Confidence 4677999999988642 11 12368999999999999999999994 3320
Q ss_pred ccccccccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeec-
Q 035967 177 RYLTAKDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNI- 255 (381)
Q Consensus 177 ~~L~peDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni- 255 (381)
+++.+ ++.|+++||++..++.++.+|+.-+.+
T Consensus 64 ---------------------------------------------kin~~--~~~f~~~eNI~~FL~ac~~~Gv~~~~lF 96 (144)
T 1ujo_A 64 ---------------------------------------------PENPP--SMVFKQMEQVAQFLKAAEDYGVIKTDMF 96 (144)
T ss_dssp ---------------------------------------------CSSCC--CSHHHHHHHHHHHHHHHHHHTCCSSSCC
T ss_pred ---------------------------------------------eecCC--CchhHHHHHHHHHHHHHHHcCcCccccC
Confidence 12322 468999999999999999999987777
Q ss_pred CCCcccCCcc
Q 035967 256 AGNDIVQGNK 265 (381)
Q Consensus 256 ~~~dI~dgn~ 265 (381)
...|+++|.-
T Consensus 97 ~t~DL~e~kn 106 (144)
T 1ujo_A 97 QTVDLYEGKD 106 (144)
T ss_dssp CHHHHHTCSC
T ss_pred ChhHHHhcCC
Confidence 8999999874
No 56
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=97.80 E-value=1.8e-05 Score=66.27 Aligned_cols=89 Identities=18% Similarity=0.271 Sum_probs=66.7
Q ss_pred hHHHHHHHHHHHh--hhcCCc-cccccc-cccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCccc
Q 035967 103 PEKILLRWMNFHL--KKAGYK-KIVTNF-SSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRY 178 (381)
Q Consensus 103 ~e~~LL~Wvn~~l--~~~g~~-~~I~nF-~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~ 178 (381)
.+..+.+|++..+ +..+.+ ..-.+| .+.++||+.||.|++.+.|+.++.
T Consensus 13 ~~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~k--------------------------- 65 (126)
T 2l3g_A 13 SAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEK--------------------------- 65 (126)
T ss_dssp HHHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCSC---------------------------
T ss_pred HHHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCCc---------------------------
Confidence 4677899999874 321111 123466 688999999999999999987641
Q ss_pred ccccccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhh-cCeeeeecCC
Q 035967 179 LTAKDIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQ-LKFSLVNIAG 257 (381)
Q Consensus 179 L~peDI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~-~~~~lvni~~ 257 (381)
++..| ++.|+++||++..++.++. .|+ .....
T Consensus 66 --------------------------------------------I~~~~-~~~f~~~eNI~~FL~a~~~~~g~--~lF~t 98 (126)
T 2l3g_A 66 --------------------------------------------VYPEP-RSESECLSNIREFLRGCGASLRL--ETFDA 98 (126)
T ss_dssp --------------------------------------------CCSSC-CSHHHHHHHHHHHHHHHHHTSCC--CCCCH
T ss_pred --------------------------------------------cCCCC-CcchHHHHHHHHHHHHHHHhCCC--CccCH
Confidence 22223 4579999999999999999 886 56899
Q ss_pred CcccCCcc
Q 035967 258 NDIVQGNK 265 (381)
Q Consensus 258 ~dI~dgn~ 265 (381)
.|+++|..
T Consensus 99 ~DL~e~kn 106 (126)
T 2l3g_A 99 NDLYQGQN 106 (126)
T ss_dssp HHHHTTSC
T ss_pred HHHHhCCC
Confidence 99999764
No 57
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=97.79 E-value=8.2e-06 Score=67.87 Aligned_cols=52 Identities=19% Similarity=0.240 Sum_probs=46.9
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEeccCCCcccCCc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGR 57 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI~~~dI~dg~ 57 (381)
||+|.+.||+|+ +||++ |.+.|+++||++..|++|++.|+ ..+.+.|++||+
T Consensus 47 kL~N~l~Pg~i~--ki~~~-~~~~f~~~eNI~~FL~a~~~~g~--~~F~~~DL~e~k 98 (121)
T 1wyr_A 47 KLINRLMPGSVE--KFCLD-PQTEADCINNINDFLKGCATLQV--EIFDPDDLYSGV 98 (121)
T ss_dssp HHHHHHSTTCCS--CCCSS-CCSHHHHHHHHHHHHHHHHHHTC--CCCCHHHHHTCS
T ss_pred HHHHHhCCCCCC--cCCCC-CcchHHHHHHHHHHHHHHHHcCC--CccCHHHHHcCC
Confidence 689999999998 78764 67899999999999999999997 689999999985
No 58
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=97.78 E-value=6.6e-05 Score=67.19 Aligned_cols=98 Identities=17% Similarity=0.231 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCccccccc
Q 035967 103 PEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTAK 182 (381)
Q Consensus 103 ~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~pe 182 (381)
....+..|++..+... .+ ...+|.+.++||+.||.|++.+.|+.++...+....
T Consensus 26 ~~~e~~~WIe~~lg~~-lp-~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~~------------------------ 79 (190)
T 2rr8_A 26 HLEEAKRWMEACLGED-LP-PTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDRE------------------------ 79 (190)
T ss_dssp HHHHHHHHHHHHSCCC-CC-CHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTTT------------------------
T ss_pred HHHHHHHHHHHHhCCC-CC-ChhHHHHHHcchhhHHHHHHHhCCCCcccccccccc------------------------
Confidence 3477899999987531 11 235899999999999999999999887532111000
Q ss_pred ccccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHHHHhhhcCeeeeec-CCCccc
Q 035967 183 DIVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVVKIGKQLKFSLVNI-AGNDIV 261 (381)
Q Consensus 183 DI~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~~~~~~~~~~lvni-~~~dI~ 261 (381)
+ .+++.+ ++.|+++||++.-++.++.+|+.-+.+ ...|++
T Consensus 80 ---------------------------------~----~~~~~~--~~~f~~~eNI~~FL~ac~~~Gvp~~~lFet~DL~ 120 (190)
T 2rr8_A 80 ---------------------------------Q----TRYKAT--GLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIY 120 (190)
T ss_dssp ---------------------------------C----HHHHHT--CCCSSTHHHHHHHHHGGGGTTCCSTTCCCHHHHT
T ss_pred ---------------------------------c----ccccCC--CCcchHHHHHHHHHHHHHHcCCCccccCCHHHHH
Confidence 0 001111 457999999999999999999987776 899999
Q ss_pred CCcc
Q 035967 262 QGNK 265 (381)
Q Consensus 262 dgn~ 265 (381)
+|.-
T Consensus 121 e~kn 124 (190)
T 2rr8_A 121 DRKN 124 (190)
T ss_dssp CTTC
T ss_pred hcCC
Confidence 9864
No 59
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=97.69 E-value=5.3e-06 Score=67.60 Aligned_cols=58 Identities=26% Similarity=0.424 Sum_probs=49.8
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEec-cCCCcccCCc-cchhH
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVN-IGTQDFIEGR-RHLVL 62 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvn-I~~~dI~dg~-~~liL 62 (381)
||+|.+.||+|+ +||+ +.+.|++.||++..|+++++.|+.-++ +.+.|++||. ..-|+
T Consensus 36 kL~N~l~P~~v~--ki~~--~~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF~~~DL~e~kn~~~V~ 95 (108)
T 1h67_A 36 ELINKLQPGSVQ--KVND--PVQNWHKLENIGNFLRAIKHYGVKPHDIFEANDLFENTNHTQVQ 95 (108)
T ss_dssp HHHHHHSTTSST--TCCC--TTSSHHHHHHHHHHHHHHHHHTSCGGGSCCHHHHHHTCCSHHHH
T ss_pred HHHHHhCCCCcc--cccc--cccchHHHHHHHHHHHHHHHcCCCcccccChhHHHhCCChHHHH
Confidence 589999999996 7886 467899999999999999999999888 9999999975 33443
No 60
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=97.60 E-value=2e-05 Score=67.64 Aligned_cols=67 Identities=21% Similarity=0.341 Sum_probs=54.2
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEec-cCCCcccCCc-cchhHHHHHHHHHH
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVN-IGTQDFIEGR-RHLVLGVISQIIKI 71 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvn-I~~~dI~dg~-~~liLgLIWqII~~ 71 (381)
||+|.+.||+| ++||++ .+.|+++||++..|++|++.|+.-++ +.+.|++||. ..-|+--|-.+-++
T Consensus 50 kL~N~l~P~~v--~kin~~--~~~f~~~eNI~~FL~a~~~~Gv~~~~lF~~~DL~e~kn~~~V~~cL~aL~~~ 118 (146)
T 1wyn_A 50 TLMNKLQPGSV--PKINRS--MQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGK 118 (146)
T ss_dssp HHHHHHCTTSC--SCCCCS--SCHHHHHHHHHHHHHHHHHHTCCSSSCCCHHHHHTCSCSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCc--cccccc--cccccHHHHHHHHHHHHHHcCCCcccccChhHHHhcCChHHHHHHHHHHHHH
Confidence 58999999999 688864 68999999999999999999999888 9999999975 34444444444433
No 61
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=97.58 E-value=2.6e-05 Score=66.15 Aligned_cols=67 Identities=19% Similarity=0.371 Sum_probs=54.4
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEec-cCCCcccCCc-cchhHHHHHHHHHH
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVN-IGTQDFIEGR-RHLVLGVISQIIKI 71 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvn-I~~~dI~dg~-~~liLgLIWqII~~ 71 (381)
||+|.+.||+| ++||++ .+.|++.||++..|++|++.|+.-++ +.+.|++||. ..-|+--|-.+-++
T Consensus 50 kL~N~l~P~~v--~ki~~~--~~~f~~~eNI~~Fl~a~~~~Gv~~~~lF~~~DL~e~kn~~~V~~cL~aL~~~ 118 (136)
T 1wyp_A 50 EFINKLQPGSV--KKINES--TQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASM 118 (136)
T ss_dssp HHHHHHSTTSS--SCCCCS--SCSHHHHHHHHHHHHHHHHHTCCGGGCCCHHHHHSCSCSHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCc--cccccc--ccchHHHHHHHHHHHHHHHcCCCcccccCchHHhcCCCHHHHHHHHHHHHHH
Confidence 58999999999 588864 67899999999999999999999888 9999999974 44454444444444
No 62
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=97.56 E-value=1.6e-05 Score=66.50 Aligned_cols=52 Identities=21% Similarity=0.307 Sum_probs=46.6
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHHHH-cCCeEeccCCCcccCCc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKA-IGCTVVNIGTQDFIEGR 57 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~k~-~gi~lvnI~~~dI~dg~ 57 (381)
||+|.+.||+|+ +||++ |.+.|++.||++..|++|++ .|+ ..+.+.|++||.
T Consensus 53 kLiN~l~Pg~i~--kI~~~-~~~~f~~~eNI~~FL~a~~~~~g~--~lF~t~DL~e~k 105 (126)
T 2l3g_A 53 RLLERLLPGTIE--KVYPE-PRSESECLSNIREFLRGCGASLRL--ETFDANDLYQGQ 105 (126)
T ss_dssp HHHHHHSTTCCS--CCCSS-CCSHHHHHHHHHHHHHHHHHTSCC--CCCCHHHHHTTS
T ss_pred HHHHHhCCCCCC--ccCCC-CCcchHHHHHHHHHHHHHHHhCCC--CccCHHHHHhCC
Confidence 689999999998 78864 67899999999999999999 986 679999999975
No 63
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=97.40 E-value=4.1e-05 Score=65.54 Aligned_cols=55 Identities=24% Similarity=0.321 Sum_probs=48.8
Q ss_pred CcccccCC---CCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEecc-CCCcccCCcc
Q 035967 1 KLINVAVP---GTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNI-GTQDFIEGRR 58 (381)
Q Consensus 1 kl~n~~~p---~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI-~~~dI~dg~~ 58 (381)
||+|.+.| |+|+ ++||. +.+.|++.||++..|++|++.||.-+++ .+.|++||+.
T Consensus 48 kL~N~l~P~~~~~I~-~kin~--~~~~f~~~eNI~~FL~ac~~~Gv~~~~lF~t~DL~e~kn 106 (144)
T 1ujo_A 48 KLVNSLYPEGSKPVK-VPENP--PSMVFKQMEQVAQFLKAAEDYGVIKTDMFQTVDLYEGKD 106 (144)
T ss_dssp HHHHHHSCTTTCCSC-CCSSC--CCSHHHHHHHHHHHHHHHHHHTCCSSSCCCHHHHHTCSC
T ss_pred HHHHHhCcccCCCcc-eeecC--CCchhHHHHHHHHHHHHHHHcCcCccccCChhHHHhcCC
Confidence 58999999 9998 67874 4789999999999999999999998887 8999999864
No 64
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=97.35 E-value=4.5e-05 Score=66.07 Aligned_cols=54 Identities=26% Similarity=0.408 Sum_probs=48.8
Q ss_pred CcccccCC---CCcccccccCCCCCCchHHHhhHHHHHHHHHHcCCeEecc-CCCcccCCcc
Q 035967 1 KLINVAVP---GTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNI-GTQDFIEGRR 58 (381)
Q Consensus 1 kl~n~~~p---~tid~r~in~~~~~~r~~~~eN~~~al~~~k~~gi~lvnI-~~~dI~dg~~ 58 (381)
||+|.+.| |+|+ +||. +.+.|++.||++..|++|++.||.-+++ .+.|++||..
T Consensus 56 kL~N~l~P~~~~~i~--kIn~--~~~~F~~~eNI~~FL~ac~~~Gv~~~~lF~t~DL~e~kn 113 (155)
T 1wym_A 56 ELINALYPEGQAPVK--KIQA--STMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKN 113 (155)
T ss_dssp HHHHHHSCTTTCSCC--CCCC--CCCHHHHHHHHHHHHHHHHHHTCCTTTCCCHHHHHTCSC
T ss_pred HHHHHhccccCCCcC--cccC--CCccccHHHHHHHHHHHHHHcCCCccccCChHHHHhcCC
Confidence 58999999 9998 8886 4789999999999999999999998887 8999999864
No 65
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=97.23 E-value=6.8e-05 Score=67.25 Aligned_cols=68 Identities=19% Similarity=0.203 Sum_probs=54.2
Q ss_pred CcccccCCCCcccccccCC------CCCCchHHHhhHHHHHHHHHHcCCeEecc-CCCcccCCc-cchhHHHHHHH
Q 035967 1 KLINVAVPGTIDERAINTK------RLLNPWERNENHTLCLNSAKAIGCTVVNI-GTQDFIEGR-RHLVLGVISQI 68 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~------~~~~r~~~~eN~~~al~~~k~~gi~lvnI-~~~dI~dg~-~~liLgLIWqI 68 (381)
||+|.+.||+|++++|+.+ .+...|++.||++..|++|++.|+.-+.+ .+.|+++|. ..-|+-.|-.+
T Consensus 82 kL~N~l~Pg~vp~kkI~~~~~~~~~~~~~~F~~~eNI~~FL~ac~~~Gvp~~~lFet~DL~e~kn~~~V~~cL~aL 157 (193)
T 3i6x_A 82 KLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIYDRKNMPRCIYCIHAL 157 (193)
T ss_dssp HHHHHHCTTTCCGGGSTTTTCHHHHHSCCCGGGHHHHHHHHHHHHHHTCCGGGCCCHHHHHSCSCHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCccccCCcccccccCcccchHHHHHHHHHHHHHHHcCCCcccCCCcHHHhcCCCHHHHHHHHHHH
Confidence 5899999999999999652 24678999999999999999999988775 899999984 44344333333
No 66
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=97.16 E-value=6.2e-05 Score=67.37 Aligned_cols=58 Identities=21% Similarity=0.244 Sum_probs=49.6
Q ss_pred CcccccCCCCcccccccCCC------CCCchHHHhhHHHHHHHHHHcCCeEecc-CCCcccCCcc
Q 035967 1 KLINVAVPGTIDERAINTKR------LLNPWERNENHTLCLNSAKAIGCTVVNI-GTQDFIEGRR 58 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~------~~~r~~~~eN~~~al~~~k~~gi~lvnI-~~~dI~dg~~ 58 (381)
||+|.+.||+|+.++|+.++ +...|++.||++..|++|++.|+.-+.+ .+.|++||..
T Consensus 60 kL~N~l~P~sv~~~kI~~~~~~~~~~~~~~f~~~eNI~~FL~ac~~~Gvp~~~lFet~DL~e~kn 124 (190)
T 2rr8_A 60 KLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIYDRKN 124 (190)
T ss_dssp HHHHHSCTTTSCSSCSSTTTCHHHHHTCCCSSTHHHHHHHHHGGGGTTCCSTTCCCHHHHTCTTC
T ss_pred HHHHHhCCCCcccccccccccccccCCCCcchHHHHHHHHHHHHHHcCCCccccCCHHHHHhcCC
Confidence 58999999999988875321 4568999999999999999999998886 8999999763
No 67
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=97.15 E-value=0.00064 Score=56.42 Aligned_cols=63 Identities=13% Similarity=0.345 Sum_probs=49.8
Q ss_pred CCCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCccccccc-CCCCccchhhhHHH
Q 035967 295 EITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVT-KGVTGMFSSNHTRC 364 (381)
Q Consensus 295 ~~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~-~~~~~~~~~~n~~~ 364 (381)
.++..+||.|+|..+.. +++... ...||-++|.|+|.+.|+.|++..|. ...++-+-++|.+.
T Consensus 4 ~~sr~ElL~WIN~~L~~-----~~~kiE--~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~ 67 (123)
T 2qjz_A 4 NLSRHDMLAWINESLQL-----NLTKIE--QLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKI 67 (123)
T ss_dssp CCCHHHHHHHHHHHHTC-----CCCCGG--GGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHCC-----CCchHH--HcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHH
Confidence 45789999999999855 344443 69999999999999999999998887 44466666666654
No 68
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=97.06 E-value=0.0015 Score=55.33 Aligned_cols=91 Identities=15% Similarity=0.150 Sum_probs=69.7
Q ss_pred hHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCC-----CcCCCCCHHHHHHHHHHhHHhhCCcc
Q 035967 103 PEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNP-----STLAVKNPLQRAKLILEHADRMGCRR 177 (381)
Q Consensus 103 ~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~-----~~~~~~d~~~na~~a~~~Ae~Lgi~~ 177 (381)
....||.|+|..|.- .++.. +++.+|.+||.|++.+.| .++. .+-.+.+..+|.+..-++..++||++
T Consensus 7 SR~eLL~WiN~~L~~-----n~tkI-E~l~sGAaYCQlmD~lfg-~i~l~kVkf~a~~e~e~i~NfKlLQ~~F~k~~I~k 79 (145)
T 4abo_I 7 SRQELLAWINQVTSL-----GLTRI-EDCGKGYAMIQIFDSIYQ-DIPLKKVNFECNNEYQYINNWKVLQQVFLKKGIDK 79 (145)
T ss_dssp CHHHHHHHHHHHHTC-----CCCSG-GGGGGSHHHHHHHHHHHC-CSCTTTSCSSCCSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHcCC-----CcchH-HHccccHHHHHHHHHHhc-CcchhhcccCCCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 456799999998852 22233 478899999999999984 4554 33345677888888888888999999
Q ss_pred cccccccccCCCchhHHHHHHHh
Q 035967 178 YLTAKDIVEGSPNLNLAFVAHIF 200 (381)
Q Consensus 178 ~L~peDI~~~~~k~il~~va~lf 200 (381)
.+..+.++.+....++-|+--+.
T Consensus 80 ~ipV~kLvKgk~QDNlEFlQWfk 102 (145)
T 4abo_I 80 VVDPERLSRCKMQDNLEFVQWAK 102 (145)
T ss_dssp CCCHHHHTTTCHHHHHHHHHHHH
T ss_pred ccCHHHHhccchHhHHHHHHHHH
Confidence 99999999999877777664433
No 69
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=97.04 E-value=0.0018 Score=60.52 Aligned_cols=92 Identities=22% Similarity=0.373 Sum_probs=72.9
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCC-----cCCCCCHHHHHHHHHHhHHhhCCc
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPS-----TLAVKNPLQRAKLILEHADRMGCR 176 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~-----~~~~~d~~~na~~a~~~Ae~Lgi~ 176 (381)
..+..||.|+|..|.. .++.. +++.+|.+||.|++.+.|+.++.. +-.+.+..+|.+..-++..++||+
T Consensus 15 ~sR~elL~WiN~~L~~-----~~~ki-Eel~tGaayCQlmd~l~P~~i~l~kVkf~a~~e~e~i~N~k~LQ~~F~k~~I~ 88 (268)
T 2r8u_A 15 LSRHDMLAWINESLQL-----NLTKI-EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVD 88 (268)
T ss_dssp CCHHHHHHHHHHHHTC-----CCCCG-GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHHhcC-----CcchH-HHcccchHHHHHHHHHccCCCchhhccCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 4567899999998852 23333 478899999999999999998753 334457788888888888899999
Q ss_pred ccccccccccCCCchhHHHHHHH
Q 035967 177 RYLTAKDIVEGSPNLNLAFVAHI 199 (381)
Q Consensus 177 ~~L~peDI~~~~~k~il~~va~l 199 (381)
+.+..+.++.++..-++-|+--+
T Consensus 89 k~ipV~kLvkgk~qDNlEFlqWf 111 (268)
T 2r8u_A 89 KIIPVDKLVKGKFQDNFEFVQWF 111 (268)
T ss_dssp CCCCHHHHTTTCHHHHHHHHHHH
T ss_pred CccCHHHHhccCchhHHHHHHHH
Confidence 99999999999987777666433
No 70
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.95 E-value=0.0014 Score=56.62 Aligned_cols=65 Identities=14% Similarity=0.331 Sum_probs=50.5
Q ss_pred CCCCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCccccccc-CCCCccchhhhHHHh
Q 035967 294 KEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVT-KGVTGMFSSNHTRCA 365 (381)
Q Consensus 294 ~~~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~-~~~~~~~~~~n~~~a 365 (381)
...++.+||.|+|..+.. +++... ...||-++|.|+|.+.|+.|++..|. ....+-+-++|.+.-
T Consensus 20 ~~~sr~ElL~WIN~~L~~-----~~~kiE--~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~l 85 (159)
T 1wyo_A 20 ENLSRHDMLAWVNDSLHL-----NYTKIE--QLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVL 85 (159)
T ss_dssp CCCCHHHHHHHHHHHSCC-----CCSSGG--GGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHCC-----CCchhh--hcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHH
Confidence 446789999999998854 344443 69999999999999999999988887 444666666776543
No 71
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.94 E-value=0.00056 Score=57.11 Aligned_cols=59 Identities=10% Similarity=0.247 Sum_probs=49.4
Q ss_pred HHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCCCCccchhhhHH
Q 035967 300 DILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVTGMFSSNHTR 363 (381)
Q Consensus 300 ~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~~~~~~~~~n~~ 363 (381)
+|++|++. ++= ..+++|+. .|++||..+..|++++-|.+||+....++.+...+++|=.
T Consensus 19 el~~WL~~-l~L---s~~~rn~r-RDFSdG~lvAEIl~~y~Pk~Vdlh~y~~~~S~~~K~~NW~ 77 (127)
T 2ee7_A 19 QLYLWVDN-IPL---SRPKRNLS-RDFSDGVLVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWG 77 (127)
T ss_dssp HHHHHHHH-SCC---SCCSSCHH-HHHTTSHHHHHHHHHHCTTTCCCSSCCCCSSHHHHHHHHH
T ss_pred HHHHHHHc-CCC---CCCCCchh-hhccchhHHHHHHHHHCcCcccccccCCCCcHHHHHHhHH
Confidence 59999994 332 23688998 8999999999999999999999999988877777777744
No 72
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.78 E-value=0.0023 Score=53.37 Aligned_cols=99 Identities=20% Similarity=0.279 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHHhHHhhCCcccccccc
Q 035967 104 EKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNPSTLAVKNPLQRAKLILEHADRMGCRRYLTAKD 183 (381)
Q Consensus 104 e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~~~~~~~d~~~na~~a~~~Ae~Lgi~~~L~peD 183 (381)
...|.+|++. + ....++.|+..||+||..++.+++.+.|..+|.....
T Consensus 17 ~~el~~WL~~-l---~Ls~~~rn~rRDFSdG~lvAEIl~~y~Pk~Vdlh~y~---------------------------- 64 (127)
T 2ee7_A 17 LHQLYLWVDN-I---PLSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYV---------------------------- 64 (127)
T ss_dssp HHHHHHHHHH-S---CCSCCSSCHHHHHTTSHHHHHHHHHHCTTTCCCSSCC----------------------------
T ss_pred HHHHHHHHHc-C---CCCCCCCchhhhccchhHHHHHHHHHCcCcccccccC----------------------------
Confidence 3568899993 3 2345789999999999999999999999998864332
Q ss_pred cccCCCchhHHHHHHHhhhHHHHHHhhcccCCCcccccccCCCCCCCchhhhhhHHHHH-HHhhhcCeeeeecCCCcccC
Q 035967 184 IVEGSPNLNLAFVAHIFQHRWVLLETLDKLSPGIVNWKIANKPPIKLPFRKVENCNQVV-KIGKQLKFSLVNIAGNDIVQ 262 (381)
Q Consensus 184 I~~~~~k~il~~va~lf~~~~~ll~~~~ki~pg~v~w~~~~~~p~~~~~~~~eN~n~~~-~~~~~~~~~lvni~~~dI~d 262 (381)
|....-.|+.|=+..- .+.+++|+.+..-.-+.|+.
T Consensus 65 -------------------------------------------~~~S~~~K~~NW~~ln~kvl~kl~~~l~~~~i~~i~~ 101 (127)
T 2ee7_A 65 -------------------------------------------PANSLQQKLSNWGHLNRKVLKRLNFSVPDDVMRKIAQ 101 (127)
T ss_dssp -------------------------------------------CCSSHHHHHHHHHHHHHHTTGGGTCCCCHHHHHHHHT
T ss_pred -------------------------------------------CCCcHHHHHHhHHHHHHHHHHHcCCCCCHHHHHHHHh
Confidence 2233456777777763 67778888654444466788
Q ss_pred CcchhHHHHHHHHHH
Q 035967 263 GNKKLILALLWQMMR 277 (381)
Q Consensus 263 gn~kliLgLiW~li~ 277 (381)
|....+-.|+.+|+-
T Consensus 102 ~~~Gaie~lL~~L~~ 116 (127)
T 2ee7_A 102 CAPGVVELVLIPLRQ 116 (127)
T ss_dssp TCTTTTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 888888888888763
No 73
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=96.70 E-value=0.0047 Score=51.37 Aligned_cols=88 Identities=19% Similarity=0.297 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCCC-----CcCCCCCHHHHHHHHHHhHHhhCCcc
Q 035967 103 PEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSNP-----STLAVKNPLQRAKLILEHADRMGCRR 177 (381)
Q Consensus 103 ~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~~-----~~~~~~d~~~na~~a~~~Ae~Lgi~~ 177 (381)
....||.|+|..+.. .+. .| ++..+|.++|.+++.+.|+ ++. .+-.+.+...|.+..-++..+++|++
T Consensus 11 sR~elL~WiN~~L~~-n~~-ki----Eel~tGaayCQl~d~l~g~-v~l~kVkf~a~~e~e~~~N~k~LQ~~f~k~~I~k 83 (127)
T 2qjx_A 11 SRTELLTWLNGLLNL-NYK-KI----EECGTGAAYCQIMDSIYGD-LPMNRVKFNATAEYEFQTNYKILQSCFSRHGIEK 83 (127)
T ss_dssp CHHHHHHHHHHHHTC-CCC-SG----GGGGGSHHHHHHHHHHHCC-SCGGGSCTTCCSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHcC-Ccc-HH----HHccchHHHHHHHhhhccc-cCccccCCCCCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 567799999998862 232 33 4668999999999999975 443 44445567788888888888999999
Q ss_pred cccccccccCCCchhHHHHH
Q 035967 178 YLTAKDIVEGSPNLNLAFVA 197 (381)
Q Consensus 178 ~L~peDI~~~~~k~il~~va 197 (381)
.+..+.++.++..-++-|+-
T Consensus 84 ~ipV~kLvKgrfQDNlEFlQ 103 (127)
T 2qjx_A 84 TVYVDKLIRCKFQDNLEFLQ 103 (127)
T ss_dssp CCCHHHHTTTCHHHHHHHHH
T ss_pred ccCHHHHhccCchhHHHHHH
Confidence 99999999999776666654
No 74
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=94.88 E-value=0.041 Score=51.29 Aligned_cols=63 Identities=13% Similarity=0.320 Sum_probs=49.9
Q ss_pred CCCCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccCC-CCccchhhhHH
Q 035967 294 KEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKG-VTGMFSSNHTR 363 (381)
Q Consensus 294 ~~~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~~-~~~~~~~~n~~ 363 (381)
..++..+||.|+|..+.- +++..- +..+|-++|-|+|.+-|+.|++..|.-. .++.|-+.|.+
T Consensus 13 ~~~sR~elL~WiN~~L~~-----~~~kiE--el~tGaayCQlmd~l~P~~i~l~kVkf~a~~e~e~i~N~k 76 (268)
T 2r8u_A 13 DNLSRHDMLAWINESLQL-----NLTKIE--QLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFK 76 (268)
T ss_dssp CCCCHHHHHHHHHHHHTC-----CCCCGG--GGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHhcC-----CcchHH--HcccchHHHHHHHHHccCCCchhhccCCCCCHHHHHHHHH
Confidence 346789999999999865 466664 6889999999999999999999988743 25566666654
No 75
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=93.70 E-value=0.048 Score=56.53 Aligned_cols=44 Identities=23% Similarity=0.289 Sum_probs=32.1
Q ss_pred HHHHHHHHhh--hc----CCccccccccccccchHHHHHHHHHhCCCCCC
Q 035967 107 LLRWMNFHLK--KA----GYKKIVTNFSSDIKDGEAYANLLNVLAPEHSN 150 (381)
Q Consensus 107 LL~Wvn~~l~--~~----g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~ 150 (381)
--+|++.... .. +....+.+|...++||++||.|++.+.|+.++
T Consensus 10 ~~~Wl~~~~~l~~~~~~~~~~~~~~~l~~~L~~G~~Lc~l~n~l~p~~v~ 59 (587)
T 3ky9_A 10 CTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAIN 59 (587)
T ss_dssp HHHHHHHTTCSCTTSTTTSTTCCHHHHHHHHSSTHHHHHHHHHHSTTSSC
T ss_pred HHHHHHHhCCCCCcccccCCCCChhhHHHHhCcHHHHHHHHHHhCCCCCC
Confidence 4578886321 10 11235789999999999999999999998764
No 76
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=93.47 E-value=0.099 Score=43.37 Aligned_cols=64 Identities=9% Similarity=0.236 Sum_probs=44.2
Q ss_pred CCCCCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCcccccccC-CCCccchhhhHHH
Q 035967 293 GKEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTK-GVTGMFSSNHTRC 364 (381)
Q Consensus 293 ~~~~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~~-~~~~~~~~~n~~~ 364 (381)
|...+..+||.|+|+.+.. +++... .-.+|-++|-|+|.+-|+ |++..|.- ..++.|-..|.+.
T Consensus 7 ~~~~sR~elL~WiN~~L~~-----n~~kiE--el~tGaayCQl~d~l~g~-v~l~kVkf~a~~e~e~~~N~k~ 71 (127)
T 2qjx_A 7 GIGESRTELLTWLNGLLNL-----NYKKIE--ECGTGAAYCQIMDSIYGD-LPMNRVKFNATAEYEFQTNYKI 71 (127)
T ss_dssp ----CHHHHHHHHHHHHTC-----CCCSGG--GGGGSHHHHHHHHHHHCC-SCGGGSCTTCCSHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHcC-----CccHHH--HccchHHHHHHHhhhccc-cCccccCCCCCCHHHHHHHHHH
Confidence 3445788999999998854 344443 568999999999999965 88888873 3355555666543
No 77
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=92.92 E-value=0.14 Score=43.34 Aligned_cols=60 Identities=10% Similarity=0.257 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCccccccc-CCCCccchhhhHH
Q 035967 296 ITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVT-KGVTGMFSSNHTR 363 (381)
Q Consensus 296 ~~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~~~~~-~~~~~~~~~~n~~ 363 (381)
.|..+||.|+|+.+.- +++... +..+|-|+|-|+|.+- +.|++..|. ...++.|-..|.+
T Consensus 6 ~SR~eLL~WiN~~L~~-----n~tkIE--~l~sGAaYCQlmD~lf-g~i~l~kVkf~a~~e~e~i~NfK 66 (145)
T 4abo_I 6 ESRQELLAWINQVTSL-----GLTRIE--DCGKGYAMIQIFDSIY-QDIPLKKVNFECNNEYQYINNWK 66 (145)
T ss_dssp -CHHHHHHHHHHHHTC-----CCCSGG--GGGGSHHHHHHHHHHH-CCSCTTTSCSSCCSHHHHHHHHH
T ss_pred ccHHHHHHHHHHHcCC-----CcchHH--HccccHHHHHHHHHHh-cCcchhhcccCCCCHHHHHHHHH
Confidence 3568999999998854 344443 6889999999999999 679999887 3335666677765
No 78
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=91.42 E-value=0.05 Score=56.40 Aligned_cols=57 Identities=18% Similarity=0.290 Sum_probs=47.6
Q ss_pred CcccccCCCCcccccccCCCCCCchHHHhhHHHHHHHH-HHcCCeEec-cCCCcccCCc
Q 035967 1 KLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSA-KAIGCTVVN-IGTQDFIEGR 57 (381)
Q Consensus 1 kl~n~~~p~tid~r~in~~~~~~r~~~~eN~~~al~~~-k~~gi~lvn-I~~~dI~dg~ 57 (381)
+|+|...||+|..++|+..+.+..|+++||++.-|++| ++.|+.-.. ..+.|++|++
T Consensus 48 ~l~n~l~p~~v~~~~~~~~~~~~~f~~~~ni~~Fl~~~~~~~g~~~~~~f~~~Dl~~~~ 106 (587)
T 3ky9_A 48 QLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLSTCCEKFGLKRSELFEAFDLFDVQ 106 (587)
T ss_dssp HHHHHHSTTSSCGGGSCSSCTTBHHHHHHHHHHHHHHHHHTTCCCTTSSCCHHHHHTCS
T ss_pred HHHHHhCCCCCCccccCCCccccchHHHHHHHHHHHHHHHHcCCCHHHcCCchhhhccC
Confidence 58999999999989999765566799999999999999 788876433 6778888875
No 79
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=90.79 E-value=0.19 Score=43.44 Aligned_cols=44 Identities=14% Similarity=0.259 Sum_probs=35.8
Q ss_pred ChHHHHHHHHHHHhhhcCCccccccccccccchHHHHHHHHHhCCCCCC
Q 035967 102 PPEKILLRWMNFHLKKAGYKKIVTNFSSDIKDGEAYANLLNVLAPEHSN 150 (381)
Q Consensus 102 s~e~~LL~Wvn~~l~~~g~~~~I~nF~~d~~DG~~l~aLl~~~~p~~~~ 150 (381)
.....|+.|+|..- ...++.+|. |+.||++|..+++.+.|+.++
T Consensus 9 ~~~~aLl~W~~tf~----~~~~~~~~~-dL~DG~~L~~iL~~IDp~~F~ 52 (164)
T 1wix_A 9 PLCDSLIIWLQTFK----TASPCQDVK-QLTNGVTMAQVLHQIDVAWFS 52 (164)
T ss_dssp HHHHHHHHHHTTCC----CSSCCCSHH-HHTTSHHHHHHHHHHCTTTSC
T ss_pred HHHHHHHHHHHHcC----CCCCcCcHH-HhccHHHHHHHHHHhCccccC
Confidence 35678999998742 123678885 899999999999999999876
No 80
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=87.03 E-value=0.34 Score=41.87 Aligned_cols=42 Identities=14% Similarity=0.268 Sum_probs=34.7
Q ss_pred HHHHHHHHhhhccCCCccccCCCCCCCccchhHHHHHHHhhCCCCccc
Q 035967 299 ADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNW 346 (381)
Q Consensus 299 ~~lL~W~~~~~~~~~~~~~i~nF~d~sw~dG~~~~aLi~~~~P~~id~ 346 (381)
..|+.|+|.--.. .++.+|. +..||.+|..++|.+.|+.++-
T Consensus 12 ~aLl~W~~tf~~~----~~~~~~~--dL~DG~~L~~iL~~IDp~~F~~ 53 (164)
T 1wix_A 12 DSLIIWLQTFKTA----SPCQDVK--QLTNGVTMAQVLHQIDVAWFSE 53 (164)
T ss_dssp HHHHHHHTTCCCS----SCCCSHH--HHTTSHHHHHHHHHHCTTTSCH
T ss_pred HHHHHHHHHcCCC----CCcCcHH--HhccHHHHHHHHHHhCccccCc
Confidence 4699999874332 3689997 6999999999999999998763
No 81
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=37.97 E-value=18 Score=27.64 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=25.4
Q ss_pred CHHHHHHHHHhhhccCC-CccccCCCCCCCccchhHHHHHH
Q 035967 297 TDADILQWANAKVRISG-SQSHMNSFKDKSLADGIFFLELL 336 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~-~~~~i~nF~d~sw~dG~~~~aLi 336 (381)
|++++..|++....+|. ..+.++.|. -||+++|+|=
T Consensus 16 S~~~V~~WL~w~~~ef~L~~~~~~~f~----mdGk~Lc~Ls 52 (89)
T 1ji7_A 16 SRDDVAQWLKWAENEFSLRPIDSNTFE----MNGKALLLLT 52 (89)
T ss_dssp CHHHHHHHHHHHHHHTTCSCCCTTTTC----SCHHHHTTCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCchhcCC----CCHHHHHcCC
Confidence 67889999998888875 223333442 7999999763
No 82
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1
Probab=32.91 E-value=32 Score=26.36 Aligned_cols=37 Identities=11% Similarity=0.244 Sum_probs=26.8
Q ss_pred CHHHHHHHHHhhhccCC-CccccCCCCCCCccchhHHHHHHH
Q 035967 297 TDADILQWANAKVRISG-SQSHMNSFKDKSLADGIFFLELLS 337 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~-~~~~i~nF~d~sw~dG~~~~aLi~ 337 (381)
|++++..|++..+.+|+ ..+.++.|. -||+.+|+|=.
T Consensus 27 s~~~V~~WL~W~~~ef~L~~v~~~~f~----m~G~~LC~ls~ 64 (91)
T 1sxd_A 27 STDQVLHWVVWVMKEFSMTDIDLTTLN----ISGRELCSLNQ 64 (91)
T ss_dssp CHHHHHHHHHHHHHHTTCCCSCSGGGC----SCHHHHHHSCH
T ss_pred CHHHHHHHHHHHHHccCCCCCChhhCC----CCHHHHHcCCH
Confidence 67889999999888885 223444553 68999998743
No 83
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A
Probab=29.39 E-value=26 Score=26.58 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=25.8
Q ss_pred CHHHHHHHHHhhhccCC-CccccCCCCCCCccchhHHHHHH
Q 035967 297 TDADILQWANAKVRISG-SQSHMNSFKDKSLADGIFFLELL 336 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~-~~~~i~nF~d~sw~dG~~~~aLi 336 (381)
|++++..|++..+.+|. ..+.++.|. -||+.+|+|=
T Consensus 14 s~~~V~~WL~W~~~ef~L~~i~~~~F~----m~G~~LC~ls 50 (85)
T 1sv0_A 14 SREDVLVFLRFCVREFDLPKLDFDLFQ----MNGKRLCLLT 50 (85)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCGGGGC----SCHHHHTTCC
T ss_pred CHHHHHHHHHHHHHccCCCCCChhhCC----CCHHHHHcCC
Confidence 67889999998888875 223445553 7899998763
No 84
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}
Probab=27.39 E-value=29 Score=26.73 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=26.0
Q ss_pred CHHHHHHHHHhhhccCC-CccccCCCCCCCccchhHHHHHHH
Q 035967 297 TDADILQWANAKVRISG-SQSHMNSFKDKSLADGIFFLELLS 337 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~-~~~~i~nF~d~sw~dG~~~~aLi~ 337 (381)
|.+++..|++....+|. ..+.++.|. -||+++|.|=.
T Consensus 16 S~~~V~~WL~w~~~ef~L~~i~~~~f~----mdGk~Lc~Lt~ 53 (93)
T 2qar_B 16 SRDDVAQWLKWAENEFSLSPIDSNTFE----MNGKALLLLTK 53 (93)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCGGGGC----SCHHHHTTCCH
T ss_pred CHHHHHHHHHHHHHhcCCCCcchhcCC----CCHHHHHcCCH
Confidence 67889999998888875 223333442 79999987643
No 85
>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A*
Probab=26.84 E-value=48 Score=26.31 Aligned_cols=37 Identities=16% Similarity=0.212 Sum_probs=27.3
Q ss_pred CHHHHHHHHHhhhccCC-CccccCCCCCCCccchhHHHHHHH
Q 035967 297 TDADILQWANAKVRISG-SQSHMNSFKDKSLADGIFFLELLS 337 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~-~~~~i~nF~d~sw~dG~~~~aLi~ 337 (381)
|++++..|++....+|. ..+.+.+|. -||+.+|+|=.
T Consensus 45 S~~~V~~WL~W~~~ef~L~~v~~~~F~----m~G~~LC~ls~ 82 (110)
T 2jv3_A 45 TETHVRDWVMWAVNEFSLKGVDFQKFC----MSGAALCALGK 82 (110)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCCTTTTC----CCHHHHHHTHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCChhcCC----CCHHHHHhCCH
Confidence 67889999998888875 233445553 78999998754
No 86
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=25.22 E-value=29 Score=25.94 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=26.3
Q ss_pred CHHHHHHHHHhhhccCC---CccccCCCCCCCccchhHHHHHHH
Q 035967 297 TDADILQWANAKVRISG---SQSHMNSFKDKSLADGIFFLELLS 337 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~---~~~~i~nF~d~sw~dG~~~~aLi~ 337 (381)
|++++..|++....+|+ ..+.+..|. -||+++|+|=.
T Consensus 15 s~~~V~~WL~w~~~e~~l~l~~~~~~~f~----m~G~~Lc~ls~ 54 (82)
T 1sv0_C 15 TRADVWKWLINMAVSEGLEVTAELPQKFP----MNGKALCLMSL 54 (82)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCTHHHHTCC----SCHHHHHHCCH
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCccccCC----CCHHHHHhCCH
Confidence 67889999988887764 122345663 59999998744
No 87
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.86 E-value=71 Score=24.51 Aligned_cols=37 Identities=14% Similarity=0.266 Sum_probs=26.8
Q ss_pred CHHHHHHHHHhhhccCCC---ccccCCCCCCCccchhHHHHHHH
Q 035967 297 TDADILQWANAKVRISGS---QSHMNSFKDKSLADGIFFLELLS 337 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~~---~~~i~nF~d~sw~dG~~~~aLi~ 337 (381)
|+.+++.|++..+.+++- .+.+.+|. -||+++|++=+
T Consensus 28 s~~~V~~WL~Wavke~~~dl~~i~~~~f~----m~G~~LC~msk 67 (92)
T 2e8p_A 28 SKTQVLDWISYQVEKNKYDASAIDFSRCD----MDGATLCNCAL 67 (92)
T ss_dssp CHHHHHHHHHHHHHHTTCCCSSCCTTTCC----CCSHHHHHSCH
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCChhhcC----CCHHHHHcCCH
Confidence 567899999999886542 23445553 79999998754
No 88
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.97 E-value=41 Score=26.09 Aligned_cols=37 Identities=14% Similarity=0.133 Sum_probs=26.4
Q ss_pred CHHHHHHHHHhhhccCCCccccCCCCCCCc--cchhHHHHHHH
Q 035967 297 TDADILQWANAKVRISGSQSHMNSFKDKSL--ADGIFFLELLS 337 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw--~dG~~~~aLi~ 337 (381)
|+.++..|++..+.+|. +.-.++. .| -||+.+|+|=.
T Consensus 28 s~~~V~~WL~W~~~ef~--L~~v~~~--~F~~m~G~~LC~ls~ 66 (98)
T 1x66_A 28 TQEHVRQWLEWAIKEYS--LMEIDTS--FFQNMDGKELCKMNK 66 (98)
T ss_dssp CTTHHHHHHHHHHHHTT--CCSCCGG--GGTTCCHHHHHHCCH
T ss_pred CHHHHHHHHHHHHHhcC--CCCCChh--hCCCCCHHHHHcCCH
Confidence 46789999998888884 3323443 45 79999998754
No 89
>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1
Probab=21.66 E-value=35 Score=26.46 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=26.6
Q ss_pred CHHHHHHHHHhhhccCCCccccCCCCCCCc--cchhHHHHHHH
Q 035967 297 TDADILQWANAKVRISGSQSHMNSFKDKSL--ADGIFFLELLS 337 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw--~dG~~~~aLi~ 337 (381)
|+.++..|++..+.+|+ +.-.+++ .| -||+++|+|=.
T Consensus 31 s~~~V~~WL~W~~~ef~--L~~i~~~--~F~~m~G~~LC~lt~ 69 (97)
T 1sxe_A 31 STDHVRQWLEWAVKEYG--LPDVNIL--LFQNIDGKELCKMTK 69 (97)
T ss_dssp CHHHHHHHHHHHHHHHT--CSSCCGG--GSTTCCHHHHTTCCH
T ss_pred CHHHHHHHHHHHHHhcC--CCCCCHH--hcCCCCHHHHHhCCH
Confidence 57889999999998884 3323343 45 79999997644
No 90
>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.04 E-value=54 Score=26.80 Aligned_cols=37 Identities=14% Similarity=0.133 Sum_probs=26.6
Q ss_pred CHHHHHHHHHhhhccCCCccccCCCCCCCc--cchhHHHHHHH
Q 035967 297 TDADILQWANAKVRISGSQSHMNSFKDKSL--ADGIFFLELLS 337 (381)
Q Consensus 297 ~~~~lL~W~~~~~~~~~~~~~i~nF~d~sw--~dG~~~~aLi~ 337 (381)
|+.++..|++..+.+|. +.-.++. .| -||+.+|+|=.
T Consensus 42 S~~~V~~WL~Wa~~ef~--L~~id~~--~Fq~mnGk~LC~Lsk 80 (128)
T 2ytu_A 42 TQEHVRQWLEWAIKEYS--LMEIDTS--FFQNMDGKELCKMNK 80 (128)
T ss_dssp CTTHHHHHHHHHHHHTC--CCSCCCG--GGSSCCTTHHHHCCH
T ss_pred CHHHHHHHHHHHHHhcC--CCCCChH--hCCCCCHHHHHcCCH
Confidence 45789999999888884 3333443 56 59999998754
Done!