Query 035970
Match_columns 377
No_of_seqs 223 out of 1383
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 13:34:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.8 5.2E-20 1.8E-24 155.5 14.1 124 2-138 6-132 (136)
2 2dmh_A Myoferlin; beta-sandwic 99.8 7.1E-19 2.4E-23 149.2 18.0 126 3-138 4-135 (140)
3 2ep6_A MCTP2 protein; beta san 99.8 2.3E-19 7.7E-24 151.6 13.7 119 2-136 9-132 (133)
4 3b7y_A E3 ubiquitin-protein li 99.8 8.6E-19 2.9E-23 151.1 15.6 127 3-136 17-153 (153)
5 1rlw_A Phospholipase A2, CALB 99.8 1.5E-18 5.1E-23 144.5 16.0 115 5-134 2-123 (126)
6 1gmi_A Protein kinase C, epsil 99.8 6.1E-19 2.1E-23 149.9 13.8 120 1-137 1-134 (136)
7 2fk9_A Protein kinase C, ETA t 99.8 3.5E-19 1.2E-23 158.2 12.6 120 1-135 24-156 (157)
8 3kwu_A MUNC13-1; calcium bindi 99.8 2.7E-18 9.1E-23 147.2 17.0 117 3-135 14-146 (148)
9 3m7f_B E3 ubiquitin-protein li 99.8 2E-18 6.8E-23 153.0 16.0 128 3-137 5-142 (176)
10 2cjt_A UNC-13 homolog A, MUNC1 99.8 7.1E-19 2.4E-23 150.5 12.0 121 4-134 3-130 (131)
11 2nq3_A Itchy homolog E3 ubiqui 99.8 5.1E-18 1.7E-22 151.9 15.5 128 4-141 34-166 (173)
12 3pyc_A E3 ubiquitin-protein li 99.8 9.7E-18 3.3E-22 141.3 14.8 118 4-134 3-131 (132)
13 2cjs_A UNC-13 homolog A, MUNC1 99.7 2.4E-17 8.1E-22 147.2 14.8 124 4-137 12-142 (167)
14 2b3r_A Phosphatidylinositol-4- 99.7 1.9E-16 6.4E-21 134.8 12.8 106 5-120 19-131 (134)
15 3f04_A Synaptotagmin-1; C2A, c 99.7 2E-16 6.9E-21 134.7 12.2 107 3-119 31-142 (143)
16 2bwq_A Regulating synaptic mem 99.7 2.3E-16 7.8E-21 131.7 12.1 105 3-118 15-129 (129)
17 1v27_A Regulating synaptic mem 99.7 9.5E-17 3.2E-21 135.7 9.8 113 3-126 18-141 (141)
18 1a25_A CALB, protein kinase C 99.7 2.9E-16 9.9E-21 135.1 12.9 104 5-120 30-140 (149)
19 1rsy_A Synaptotagmin I; calciu 99.7 2.8E-16 9.5E-21 135.8 12.8 107 4-120 40-151 (152)
20 1wfm_A Synaptotagmin XIII; C2 99.7 3E-16 1E-20 134.0 12.5 106 4-120 24-133 (138)
21 2dmg_A KIAA1228 protein; beta- 99.7 7.5E-17 2.6E-21 137.2 8.7 112 3-125 21-141 (142)
22 3fdw_A Synaptotagmin-like prot 99.7 2E-16 6.8E-21 136.0 11.4 109 3-121 20-136 (148)
23 2r83_A Synaptotagmin-1; C2A-C2 99.7 1.1E-15 3.6E-20 143.7 17.1 126 3-138 16-149 (284)
24 2d8k_A Synaptotagmin VII; exoc 99.7 3.2E-16 1.1E-20 133.4 11.9 108 3-120 23-136 (141)
25 1ugk_A Synaptotagmin IV, KIAA1 99.7 7E-16 2.4E-20 130.8 13.6 107 4-119 20-133 (138)
26 2z0u_A WW domain-containing pr 99.7 1.3E-16 4.6E-21 140.1 9.1 107 3-118 40-154 (155)
27 2enp_A B/K protein; C2 type 1, 99.7 1.2E-16 4.1E-21 137.0 8.0 107 3-119 23-141 (147)
28 2chd_A Rabphilin-3A, exophilin 99.7 2.9E-16 9.8E-21 133.6 10.1 107 4-120 27-141 (142)
29 3fbk_A RGS3, RGP3, regulator o 99.7 4.6E-16 1.6E-20 134.8 11.0 109 3-121 24-139 (153)
30 3rdl_A Protein kinase C alpha 99.7 6.6E-16 2.3E-20 129.9 11.7 104 5-120 15-125 (137)
31 1rh8_A Piccolo protein; beta-s 99.6 1.3E-16 4.3E-21 135.6 5.9 107 5-121 17-140 (142)
32 3n5a_A Synaptotagmin-7; calciu 99.6 7.1E-16 2.4E-20 129.6 10.3 94 3-99 13-113 (138)
33 2q3x_A Regulating synaptic mem 99.6 1.4E-15 4.7E-20 134.7 12.2 104 5-121 29-141 (171)
34 3l9b_A Otoferlin; C2-domain, b 99.6 3.5E-15 1.2E-19 131.2 14.3 119 7-138 22-142 (144)
35 1tjx_A Similar to synaptotagmi 99.6 2E-15 6.8E-20 131.2 12.3 114 3-119 22-147 (159)
36 2cm5_A Rabphilin-3A; protein t 99.6 2E-15 7E-20 132.2 12.1 94 3-99 34-134 (166)
37 1djx_A PLC-D1, phosphoinositid 99.6 7.3E-15 2.5E-19 155.3 16.8 118 4-135 495-623 (624)
38 1w15_A Synaptotagmin IV; metal 99.6 3.9E-15 1.3E-19 128.3 11.7 92 3-97 27-125 (153)
39 1dqv_A Synaptotagmin III; beta 99.6 1.6E-14 5.5E-19 137.7 14.7 127 3-138 17-151 (296)
40 3jzy_A Intersectin 2; C2 domai 99.5 4E-14 1.4E-18 143.4 13.4 120 4-135 385-507 (510)
41 3qr0_A Phospholipase C-beta (P 99.5 5.1E-13 1.7E-17 145.1 15.4 116 5-139 649-774 (816)
42 2r83_A Synaptotagmin-1; C2A-C2 99.5 3.1E-13 1.1E-17 126.9 11.8 115 3-120 147-273 (284)
43 3ohm_B 1-phosphatidylinositol- 99.5 3.5E-13 1.2E-17 147.3 13.7 115 5-138 724-847 (885)
44 2zkm_X 1-phosphatidylinositol- 99.4 8.3E-13 2.8E-17 143.2 15.0 112 5-135 677-798 (799)
45 3nsj_A Perforin-1; pore formin 99.4 7.9E-13 2.7E-17 137.8 14.3 111 5-137 393-505 (540)
46 1cjy_A CPLA2, protein (cytosol 99.4 5.3E-13 1.8E-17 143.8 11.8 104 3-118 15-125 (749)
47 3bxj_A RAS GTPase-activating p 99.4 3.9E-14 1.3E-18 145.2 0.2 118 5-138 10-159 (483)
48 1dqv_A Synaptotagmin III; beta 99.3 9.1E-13 3.1E-17 125.6 4.7 94 3-99 149-249 (296)
49 3pfq_A PKC-B, PKC-beta, protei 99.1 1.2E-10 4.1E-15 123.2 10.8 104 5-120 171-281 (674)
50 1yrk_A NPKC-delta, protein kin 98.7 2.2E-07 7.4E-12 79.9 13.7 115 5-135 5-124 (126)
51 2enj_A NPKC-theta, protein kin 98.6 2.6E-07 8.8E-12 80.5 10.8 115 5-135 9-129 (138)
52 2yrb_A Protein fantom; beta sa 95.0 0.22 7.4E-06 44.1 11.1 128 3-138 15-152 (156)
53 2wxf_A Phosphatidylinositol-4, 87.6 2.9 9.9E-05 46.3 11.3 90 6-98 217-324 (940)
54 3l4c_A Dedicator of cytokinesi 87.1 1.7 5.9E-05 40.3 7.9 58 37-97 77-139 (220)
55 3hhm_A Phosphatidylinositol-4, 84.9 3.6 0.00012 46.3 10.3 91 6-99 355-456 (1091)
56 2qzq_A Axin interactor, dorsal 74.8 11 0.00039 33.0 8.1 94 6-101 14-116 (152)
57 1e7u_A Phosphatidylinositol 3- 71.9 23 0.00079 39.3 11.6 91 6-98 218-330 (961)
58 2y3a_A Phosphatidylinositol-4, 55.7 9.3 0.00032 43.0 4.6 72 6-80 353-429 (1092)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.83 E-value=5.2e-20 Score=155.49 Aligned_cols=124 Identities=20% Similarity=0.307 Sum_probs=104.9
Q ss_pred CCCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEE
Q 035970 2 VPPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYA 79 (377)
Q Consensus 2 ~~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD 79 (377)
..+.+.|+|+|++|++|+.. .+.+||||++++++ .+++|+++++++.||+|||+|.|.+.+ ....|.|+|||
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~~~~nP~Wne~f~f~v~~-----~~~~l~~~V~d 79 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-QDQKSNVAEGMGTTPEWNETFIFTVSE-----GTTELKAKIFD 79 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS-CEEECCCCTTCCSSCEEEEEEEEEEES-----SCCEEEEEECC
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECC-ccceeEeccCCCCCCccCcEEEEEECC-----CCCEEEEEEEE
Confidence 35678999999999999754 57899999999986 477999887458999999999999986 25799999999
Q ss_pred cCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceEEEEEEEEEecC
Q 035970 80 AAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGILNLGITLLDNT 138 (377)
Q Consensus 80 ~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~L~LsV~f~p~s 138 (377)
++.+ .|++||++.|+|.++.... .....||+|. ++++..|+|+|++.|.+..
T Consensus 80 ~~~~~~d~~lG~~~i~l~~l~~~~------~~~~~w~~L~-~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 80 KDVGTEDDAVGEATIPLEPVFVEG------SIPPTAYNVV-KDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp SSSCTTTCCSEEEEEESHHHHHHS------EEEEEEEEEE-ETTEEEEEEEEEEEEEECC
T ss_pred CCCCCCCceEEEEEEEHHHhccCC------CCCcEEEEee-cCCccCEEEEEEEEEEeCC
Confidence 9966 6999999999999985432 1235799998 6778999999999999875
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=7.1e-19 Score=149.21 Aligned_cols=126 Identities=20% Similarity=0.253 Sum_probs=102.6
Q ss_pred CCCeEEEEEEEEeecCCCCC-CCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEcC
Q 035970 3 PPPRVLEISIVSGHDLALVS-KSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAAA 81 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~~-g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~d 81 (377)
...+.|+|+|++|++|+... +.+||||++++++ .+++|+++++ +.||+|||+|.|.+....+ +....|.|+|||++
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~-~~~kT~v~~~-t~nP~wne~f~f~v~~~~~-~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKD-EKKKTKKVDN-ELNPVWNEILEFDLRGIPL-DFSSSLGIIVKDFE 80 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSSSCCCEEEEEECSS-CEEECCCCCS-CSSCEEEEEEEEECSSCCC-CTTCEEEEEEEETT
T ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECC-EeEEeeeecC-CCCCccCcEEEEEeccccc-CCCCEEEEEEEECC
Confidence 34689999999999997532 7899999999985 5789999875 7999999999999976432 23578999999999
Q ss_pred cC-CCceeEEEEEEcccccCCcccCCCCCceeEEEE---eeCCCC-CcceEEEEEEEEEecC
Q 035970 82 WL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQ---VRRPSG-RPQGILNLGITLLDNT 138 (377)
Q Consensus 82 ~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~---Lrr~sG-k~~G~L~LsV~f~p~s 138 (377)
.+ .|++||++.|+|.++..... ...||. |.++.+ ...|+|+|.+.|.+.+
T Consensus 81 ~~~~~~~lG~~~i~l~~l~~~~~-------~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 81 TIGQNKLIGTATVALKDLTGDQS-------RSLPYKLISLLNEKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp CSSSCCCCEEEEEEGGGTCSSSC-------EEEEEEEEEEECTTCCEEEEEEEEEEEECCCB
T ss_pred CCCCCceEEEEEEEHHHhccCCC-------ceeEEeeeeccCCCCCCCCCEEEEEEEEECCC
Confidence 76 68999999999999866532 245766 776554 5789999999999865
No 3
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=2.3e-19 Score=151.55 Aligned_cols=119 Identities=16% Similarity=0.290 Sum_probs=101.3
Q ss_pred CCCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEE
Q 035970 2 VPPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYA 79 (377)
Q Consensus 2 ~~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD 79 (377)
..+.+.|+|+|++|++|+.. .+.+||||++++++ .+++|+++++ +.||.|||+|.|.+.+. ...|.|+|||
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~-t~nP~wne~f~f~~~~~-----~~~l~i~V~d 81 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN-DRLQTHTVYK-NLNPEWNKVFTFPIKDI-----HDVLEVTVFD 81 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT-EEEECCCCSS-CSSCCCCEEEEEEESCT-----TCEEEEEEEE
T ss_pred cCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC-EEEEeeeecC-CCCCccccEEEEEecCC-----CCEEEEEEEE
Confidence 46789999999999999754 57899999999986 5789999876 79999999999999853 4789999999
Q ss_pred cCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCC--CCcceEEEEEEEEEe
Q 035970 80 AAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPS--GRPQGILNLGITLLD 136 (377)
Q Consensus 80 ~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~s--Gk~~G~L~LsV~f~p 136 (377)
++.+ .|++||++.|+|.++..+. ..||+|..+. +...|+|+|.+.|..
T Consensus 82 ~d~~~~~~~lG~~~i~l~~l~~~~---------~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 82 EDGDKPPDFLGKVAIPLLSIRDGQ---------PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EETTEEEEECCBCEEEGGGCCSSC---------CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCCeeEEEEEEHHHccCCC---------ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 9976 5999999999999986532 2699988654 468999999999874
No 4
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.80 E-value=8.6e-19 Score=151.08 Aligned_cols=127 Identities=21% Similarity=0.373 Sum_probs=99.0
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCC-----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPE-----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMI 75 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~-----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~V 75 (377)
...+.|+|+|++|++|+.. .+.+||||++++.+. .+++|+++++ +.||+|||+|.|.+... ...|.|
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~-----~~~l~~ 90 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKK-SLNPKWNEEILFRVHPQ-----QHRLLF 90 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSS-CSSCCCCEEEEEEECTT-----TCEEEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccC-CCCCCCCCEEEEEecCC-----CCEEEE
Confidence 3567999999999999753 578999999999742 4678999876 79999999999999853 478999
Q ss_pred EEEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC--CCCcceEEEEEEEEEe
Q 035970 76 EIYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP--SGRPQGILNLGITLLD 136 (377)
Q Consensus 76 eVyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~--sGk~~G~L~LsV~f~p 136 (377)
+|||++.+ .|++||++.|+|.++...... ....+...||+|... .++..|+|+|+++|.|
T Consensus 91 ~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~-~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 91 EVFDENRLTRDDFLGQVDVPLYPLPTENPR-LERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp EEEECCSSSCCEEEEEEEEECCSCCBCCTT-SCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred EEEECCCCcCCCeeEEEEEEHHHcccCCCc-ccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 99999976 689999999999998765431 012233579999754 3478999999999975
No 5
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.80 E-value=1.5e-18 Score=144.46 Aligned_cols=115 Identities=17% Similarity=0.316 Sum_probs=93.8
Q ss_pred CeEEEEEEEEeecCCCC-----CCCCCeEEEEEECC--CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEE
Q 035970 5 PRVLEISIVSGHDLALV-----SKSMKTYSVAWVDP--ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEI 77 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~~-----~g~~DPYVvV~L~p--~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeV 77 (377)
.+.|+|+|++|++|+.. .+.+||||++++.+ ..+++|+++++ +.||+|||+|.|.+... ....|.|+|
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~----~~~~l~i~V 76 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPN----QENVLEITL 76 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTT----SCCEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCC-CCCCcccceEEEEecCC----CCCEEEEEE
Confidence 57899999999999863 47899999999986 37889999875 79999999999999653 357899999
Q ss_pred EEcCcCCCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceEEEEEEEE
Q 035970 78 YAAAWLKDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGILNLGITL 134 (377)
Q Consensus 78 yD~d~~~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~L~LsV~f 134 (377)
||++.++|++||++.|+|.++..+.. ...||+|.. ...|.|+|.+..
T Consensus 77 ~d~d~~~~~~iG~~~i~l~~l~~~~~-------~~~~~~L~~---~~~g~i~~~le~ 123 (126)
T 1rlw_A 77 MDANYVMDETLGTATFTVSSMKVGEK-------KEVPFIFNQ---VTEMVLEMSLEV 123 (126)
T ss_dssp EECCSSCCEEEEEEEEEGGGSCTTCE-------EEEEEEETT---TEEEEEEEEEEC
T ss_pred EECCCCCCceeEEEEEEHHHccCCCc-------EEEEEEcCC---CceEEEEEEEEe
Confidence 99998889999999999999875533 357998863 345666665543
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.80 E-value=6.1e-19 Score=149.94 Aligned_cols=120 Identities=23% Similarity=0.302 Sum_probs=97.9
Q ss_pred CCCCCeEEEEEEEEeecCCCC--CC-----------CCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCC
Q 035970 1 MVPPPRVLEISIVSGHDLALV--SK-----------SMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLT 67 (377)
Q Consensus 1 ~~~p~g~LeVtVISAkdL~~~--~g-----------~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~ 67 (377)
|+...+.|+|+|++|++|++. .+ .+||||++++++....+|++.++ +.||+|||+|.|.+..
T Consensus 1 m~~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~-t~nP~WnE~f~f~v~~---- 75 (136)
T 1gmi_A 1 MVVFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQK-TNSPAWHDEFVTDVCN---- 75 (136)
T ss_dssp CCCEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEE----
T ss_pred CcccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECC-CcCCccCCEEEEEecC----
Confidence 677789999999999999753 22 38999999998655568888765 7999999999999975
Q ss_pred CCCceEEEEEEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceEEEEEEEEEec
Q 035970 68 DETSAIMIEIYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGILNLGITLLDN 137 (377)
Q Consensus 68 ~~~s~L~VeVyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~L~LsV~f~p~ 137 (377)
...|.|+|||++.+ .|++||.+.|+|.++..... .....|+.|. ++|+|+|.++|.+.
T Consensus 76 --~~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~-----~~~~~w~~L~-----~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 76 --GRKIELAVFHDAPIGYDDFVANCTIQFEELLQNGS-----RHFEDWIDLE-----PEGKVYVIIDLSGS 134 (136)
T ss_dssp --ECEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTC-----SEEEEEEECB-----SSCEEEEEEEEEEE
T ss_pred --CCEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCC-----CCccEEEEcC-----CCeEEEEEEEEEec
Confidence 27899999999965 58999999999999876421 1235788775 48999999999875
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.80 E-value=3.5e-19 Score=158.18 Aligned_cols=120 Identities=23% Similarity=0.276 Sum_probs=97.0
Q ss_pred CCCCCeEEEEEEEEeecCCCC------------CCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCC
Q 035970 1 MVPPPRVLEISIVSGHDLALV------------SKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTD 68 (377)
Q Consensus 1 ~~~p~g~LeVtVISAkdL~~~------------~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~ 68 (377)
|+...+.|+|+|++|++|+.. .+.+||||+|.+++....+|++.++ +.||+|||+|.|.|.+
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~k-tlnP~WNE~F~f~v~~----- 97 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQK-TNKPTYNEEFCANVTD----- 97 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEE-----
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCC-CCCCccCcEEEEEcCC-----
Confidence 556678999999999999753 1578999999998655578998765 8999999999999975
Q ss_pred CCceEEEEEEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceEEEEEEEEE
Q 035970 69 ETSAIMIEIYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGILNLGITLL 135 (377)
Q Consensus 69 ~~s~L~VeVyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~L~LsV~f~ 135 (377)
...|.|+|||++.+ .|++||.+.|+|.++..... .......||+|. ++|.|+|.+.|.
T Consensus 98 -~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~---~~~~~~~W~~L~-----~~G~i~l~l~~~ 156 (157)
T 2fk9_A 98 -GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTG---ASDTFEGWVDLE-----PEGKVFVVITLT 156 (157)
T ss_dssp -ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHT---TCSEEEEEEECB-----SSCEEEEEEEEC
T ss_pred -CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccC---CCCcccEEEECC-----CCcEEEEEEEEE
Confidence 36899999999876 58999999999999875410 012346899985 389999999874
No 8
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.79 E-value=2.7e-18 Score=147.21 Aligned_cols=117 Identities=20% Similarity=0.288 Sum_probs=97.3
Q ss_pred CCCeEEEEEEEEeecCCC--CCCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEc
Q 035970 3 PPPRVLEISIVSGHDLAL--VSKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAA 80 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~--~~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~ 80 (377)
...+.|+|+|++|++|+. ..+.+||||+++++ ..+++|+++++ +.||.|||+|.|.+... ...|.|+|||+
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~-~~~~kT~~~~~-t~nP~Wne~f~f~v~~~-----~~~l~~~v~d~ 86 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVG-KTKKRTKTIYG-NLNPVWEENFHFECHNS-----SDRIKVRVLDE 86 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-TEEEECCCCCS-CSSCEEEEEEEEEECST-----TCEEEEEEEEC
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC-CEEEECCccCC-CCCCCcccEEEEEecCC-----CCEEEEEEEEC
Confidence 446899999999999975 36899999999997 46889999875 79999999999999763 47899999999
Q ss_pred CcC------------CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCC--CCcceEEEEEEEEE
Q 035970 81 AWL------------KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPS--GRPQGILNLGITLL 135 (377)
Q Consensus 81 d~~------------~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~s--Gk~~G~L~LsV~f~ 135 (377)
+.. .|++||++.|+|.++... ...||+|.... +...|+|+|.++|.
T Consensus 87 d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~---------~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 87 DDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGE---------MDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp CCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCSE---------EEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred CCCccccccccccCCCCccEEEEEEEHHHCcCC---------CCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 963 699999999999998332 24799998543 45789999999884
No 9
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.79 E-value=2e-18 Score=152.99 Aligned_cols=128 Identities=23% Similarity=0.378 Sum_probs=99.1
Q ss_pred CCCeEEEEEEEEeecCCC--CCCCCCeEEEEEECCC-----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEE
Q 035970 3 PPPRVLEISIVSGHDLAL--VSKSMKTYSVAWVDPE-----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMI 75 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~--~~g~~DPYVvV~L~p~-----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~V 75 (377)
...+.|+|+|++|++|+. ..+.+||||+|++.+. .+++|+|+++ +.||+|||+|.|.+... ...|.|
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~-t~nP~Wne~f~f~v~~~-----~~~L~~ 78 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKK-SLNPKWNEEILFRVLPQ-----RHRILF 78 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSS-CSSCEEEEEEEEEECTT-----TCEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECC-CCCCcccceEEEEEcCC-----CCEEEE
Confidence 457899999999999974 4588999999999742 4678999875 89999999999999853 468999
Q ss_pred EEEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeC--CCCCcceEEEEEEEEEec
Q 035970 76 EIYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRR--PSGRPQGILNLGITLLDN 137 (377)
Q Consensus 76 eVyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr--~sGk~~G~L~LsV~f~p~ 137 (377)
+|||++.+ .|+|||++.|+|.++...... .+..+...||+|.. ..++..|+|+|++.|.+.
T Consensus 79 ~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~-~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 79 EVFDENRLTRDDFLGQVDVPLYPLPTENPR-MERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp EEEECC----CEEEEEEEEESCSCCBC-------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred EEEECCCCCCCcEEEEEEEEHHHccccCCc-ccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 99999866 689999999999999765431 01122337999885 345789999999999987
No 10
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.78 E-value=7.1e-19 Score=150.47 Aligned_cols=121 Identities=13% Similarity=0.230 Sum_probs=85.7
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEcCcC
Q 035970 4 PPRVLEISIVSGHDLALVSKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAAAWL 83 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~~~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~d~~ 83 (377)
+.+.|.|+|++|++|.. .+.+||||+++. +..+|++++.++.||+|||+|.|.+... ...|.|+|||++..
T Consensus 3 ~~~~L~V~V~~A~~l~~-~g~~DPYv~v~~---~~~kt~~~~~~t~nP~WnE~f~f~v~~~-----~~~L~~~V~D~d~~ 73 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA-QEKFNTYVTLKV---QNVKSTTIAVRGSQPSWEQDFMFEINRL-----DLGLTVEVWNKGLI 73 (131)
T ss_dssp CCEEEEEEEEEEECSSC-GGGCEEEEEEEE---TTEEEECCCEESSSCEEEEEEEEEECCC-----SSEEEEEEEECCSS
T ss_pred cceEEEEEEEEeECCCC-CCCcCeEEEEEe---cCEEEeEecCCCCCceECCEEEEEEeCC-----CCeEEEEEEECCCC
Confidence 46899999999998853 678999999992 3445666554579999999999999853 45799999999955
Q ss_pred CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceE-------EEEEEEE
Q 035970 84 KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGI-------LNLGITL 134 (377)
Q Consensus 84 ~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~-------L~LsV~f 134 (377)
.|++||++.|+|.++..... .+...+..++|.+..++|+.+|+ +.+.++|
T Consensus 74 ~dd~iG~~~i~l~~l~~~~~-~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 74 WDTMVGTVWIPLRTIRQSNE-EGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp CEEEEEEEEEEGGGSCBCSS-CCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred CCCeEEEEEEEHHHhhhcCC-CCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 79999999999999875532 11223445567766677777776 7777776
No 11
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=5.1e-18 Score=151.89 Aligned_cols=128 Identities=19% Similarity=0.197 Sum_probs=101.0
Q ss_pred CCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEcC
Q 035970 4 PPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAAA 81 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~d 81 (377)
..+.|+|+|++|++|... .+.+||||+|++++ .+++|+|+++ +.||+|||+|.|.+.+ ...|.|+|||++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~-~~~kT~v~~~-tlnP~Wne~f~f~v~~------~~~L~~~V~D~d 105 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG-QSKKTEKCNN-TNSPKWKQPLTVIVTP------VSKLHFRVWSHQ 105 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT-EEEECCCCSS-CSSCEEEEEEEEEECT------TCEEEEEEEECC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECC-EEeEccccCC-CCCCeECCEEEEEeCC------CCEEEEEEEECC
Confidence 567899999999999732 34599999999986 7889999875 7999999999999963 578999999999
Q ss_pred cC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCC--CCcceEEEEEEEEEecCCCC
Q 035970 82 WL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPS--GRPQGILNLGITLLDNTMRS 141 (377)
Q Consensus 82 ~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~s--Gk~~G~L~LsV~f~p~s~~s 141 (377)
.+ .|++||++.|+|.++...... .......|++|...+ .+..|+|.|.+.+.+..+..
T Consensus 106 ~~~~dd~lG~~~i~l~~l~~~~~~--~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~~~~ 166 (173)
T 2nq3_A 106 TLKSDVLLGTAALDIYETLKSNNM--KLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLESEV 166 (173)
T ss_dssp SSSCCEEEEEEEEEHHHHHHHTTT--EESSEEEEEEEEESSCTTSEEEEEEEEEESEECC---
T ss_pred CCCCCceEEEEEEEHHHhcccCCC--CcceeEEEEECccCCCCCcccEEEEEEEeeeecchhh
Confidence 76 688999999999998764321 011125689988653 36799999999998775433
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.76 E-value=9.7e-18 Score=141.34 Aligned_cols=118 Identities=16% Similarity=0.296 Sum_probs=94.0
Q ss_pred CCeEEEEEEEEeecCCC--CCCCCCeEEEEEECC-CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEc
Q 035970 4 PPRVLEISIVSGHDLAL--VSKSMKTYSVAWVDP-ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAA 80 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~--~~g~~DPYVvV~L~p-~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~ 80 (377)
....|+|+|++|++|.. ..+.+||||++++++ ..+.+|+++++ +.||+|||+|.|.+... ..|.|+|||+
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~------~~l~~~v~d~ 75 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKN-TLDPKWNQHYDLYVGKT------DSITISVWNH 75 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSS-CSSCEEEEEEEEEEETT------CCEEEEEEEG
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCC-CCCCCccCEEEEEeCCC------CEEEEEEEEC
Confidence 45789999999999964 457899999999975 47889999865 89999999999999763 3599999999
Q ss_pred CcCC----CceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCC----CCcceEEEEEEEE
Q 035970 81 AWLK----DALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPS----GRPQGILNLGITL 134 (377)
Q Consensus 81 d~~~----DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~s----Gk~~G~L~LsV~f 134 (377)
+.++ |+|||++.|++.++..... . ...+++|.... .+..|+|+|.+.+
T Consensus 76 d~~~~~~~d~~lG~~~i~l~~l~~~~~----~--~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 76 KKIHKKQGAGFLGCVRLLSNAISRLKD----T--GYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp GGTTSSTTTTEEEEEEECHHHHHHHTT----S--CCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCCCCCCceEEEEEeHHHhhcccc----c--CcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 9764 7999999999998843321 1 13578887542 2469999999875
No 13
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.74 E-value=2.4e-17 Score=147.16 Aligned_cols=124 Identities=12% Similarity=0.188 Sum_probs=94.6
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEcCcC
Q 035970 4 PPRVLEISIVSGHDLALVSKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAAAWL 83 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~~~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~d~~ 83 (377)
..+.|.|+|++|++|. ..+.+||||+|+ . +..+|++++.++.||+|||+|.|.+... ...|.|+|||++..
T Consensus 12 ~~~~L~V~V~~A~~l~-~~g~~DPYV~v~-~--~~~kt~~~~~~t~nP~WnE~f~f~v~~~-----~~~L~~~V~D~d~~ 82 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG-AQEKFNTYVTLK-V--QNVESTTIAVRGSQPSWEQDFMFEINRL-----DLGLTVEVWNKGLI 82 (167)
T ss_dssp CCCEEEEEEEEEECSS-CGGGCEEEEEEE-E--TTEEEECCCEESSSCEEEEEEEEECCCT-----TSEEEEEEEECCSS
T ss_pred ceEEEEEEEEEEECCC-CCCCCCeEEEEE-e--cceEEEEecCCCCCCCCCCEEEEEeeCC-----CCEEEEEEEECCCC
Confidence 4679999999999884 467899999999 2 3456776654579999999999999853 46799999999955
Q ss_pred CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceE-------EEEEEEEEec
Q 035970 84 KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGI-------LNLGITLLDN 137 (377)
Q Consensus 84 ~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~-------L~LsV~f~p~ 137 (377)
.|++||++.|+|.++..... .....+...+|.+..++|+.+|+ |.+.++|...
T Consensus 83 ~dd~iG~~~i~L~~l~~~~~-~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~ 142 (167)
T 2cjs_A 83 WDTMVGTVWIPLRTIRQSNE-EGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELP 142 (167)
T ss_dssp CCEEEEEEEEEGGGSCBCSS-CCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECC
T ss_pred CCceEEEEEEEHHHhcccCc-CCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecC
Confidence 79999999999999875432 11123456778777777766654 6677777544
No 14
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.69 E-value=1.9e-16 Score=134.80 Aligned_cols=106 Identities=17% Similarity=0.279 Sum_probs=85.3
Q ss_pred CeEEEEEEEEeecCCC-CCCCCCeEEEEEECC----CCeEEeEeeCCCCCCCeeeeEEEEE-eccCCCCCCCceEEEEEE
Q 035970 5 PRVLEISIVSGHDLAL-VSKSMKTYSVAWVDP----ERKLTTRVDQNGLNNPSWNEKFVFR-VDDRFLTDETSAIMIEIY 78 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~-~~g~~DPYVvV~L~p----~~k~rTrV~k~gg~NP~WNEtF~F~-V~~~~L~~~~s~L~VeVy 78 (377)
.+.|+|+|++|++|+. .++.+||||++++.+ ..+.+|+++++ +.||+|||+|.|. +....+ ....|.|+||
T Consensus 19 ~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wnE~f~f~~v~~~~l--~~~~L~~~V~ 95 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRK-TRNPTFNEMLVYSGYSKETL--RQRELQLSVL 95 (134)
T ss_dssp TTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCS-CSSCEEEEEEEEESCCHHHH--TTCEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcC-CCCCCCccEEEECCcCHHHh--CcCEEEEEEE
Confidence 4689999999999974 357899999999943 35789999875 8999999999999 764322 3478999999
Q ss_pred EcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC
Q 035970 79 AAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP 120 (377)
Q Consensus 79 D~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~ 120 (377)
|++.+ .|++||++.|+|.++..... ...||+|...
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~~~~-------~~~W~~L~~~ 131 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNLSKE-------TVKWYQLTAA 131 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCTTSC-------EEEEEECBC-
T ss_pred ECCCCCCCcEEEEEEEEhhhccCCCC-------cceeEECCCc
Confidence 99976 58999999999999866422 3579998743
No 15
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.68 E-value=2e-16 Score=134.73 Aligned_cols=107 Identities=20% Similarity=0.323 Sum_probs=86.8
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECC--CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDP--ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIY 78 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p--~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVy 78 (377)
+..+.|+|+|++|++|+.. .+.+||||++++.+ ..+++|+++++ +.||+|||+|.|.+....+ ....|.|+||
T Consensus 31 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~L~i~V~ 107 (143)
T 3f04_A 31 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSEL--GGKTLVMAVY 107 (143)
T ss_dssp TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCS-CSSCEEEEEEEECCCHHHH--TTCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcC-CCCCcCcCeEEEeecHhhc--CCCEEEEEEE
Confidence 3567899999999999754 57899999999953 35789998875 7999999999999875322 2478999999
Q ss_pred EcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeC
Q 035970 79 AAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRR 119 (377)
Q Consensus 79 D~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr 119 (377)
|++.+ .|++||++.|+|.++..... ...||+|..
T Consensus 108 d~d~~~~~~~iG~~~i~l~~l~~~~~-------~~~W~~L~~ 142 (143)
T 3f04_A 108 DFDRFSKHDIIGEFKVPMNTVDFGHV-------TEEWRDLQS 142 (143)
T ss_dssp ECCSSSCCEEEEEEEEEGGGCCTTSC-------EEEEEECBC
T ss_pred eCCCCCCCceEEEEEEEHHHccCCCC-------cceEEECcC
Confidence 99976 68999999999999866432 357998863
No 16
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=2.3e-16 Score=131.70 Aligned_cols=105 Identities=15% Similarity=0.306 Sum_probs=81.1
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECC----CCeEEeEeeCCCCCCCeeeeEEEEEe-ccCCCCCCCceEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDP----ERKLTTRVDQNGLNNPSWNEKFVFRV-DDRFLTDETSAIMI 75 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p----~~k~rTrV~k~gg~NP~WNEtF~F~V-~~~~L~~~~s~L~V 75 (377)
+..+.|+|+|++|++|+.. .+.+||||++++.+ ..+.+|+++++ +.||+|||+|.|.+ ....+ ....|.|
T Consensus 15 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~--~~~~l~~ 91 (129)
T 2bwq_A 15 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREF--RERMLEI 91 (129)
T ss_dssp TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSS-BSSCEEEEEEEECSCCGGGG--GGCEEEE
T ss_pred cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccC-CCCCccccEEEEccCCHHHh--cCCeEEE
Confidence 3467899999999999754 57899999999943 36789999875 79999999999995 32211 2468999
Q ss_pred EEEEcCcCC---CceeEEEEEEcccccCCcccCCCCCceeEEEEee
Q 035970 76 EIYAAAWLK---DALIGSVRVLISHLFGTLTHNSSSSTRYVALQVR 118 (377)
Q Consensus 76 eVyD~d~~~---DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lr 118 (377)
+|||++.++ |++||++.|+|.++.... ...||+|.
T Consensus 92 ~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~--------~~~W~~Lq 129 (129)
T 2bwq_A 92 TLWDQARVREEESEFLGEILIELETALLDD--------EPHWYKLQ 129 (129)
T ss_dssp EEEEC-------CEEEEEEEEEGGGCCCSS--------CEEEEECC
T ss_pred EEEECCcCcCcCCceeEEEEEEccccCCCc--------CCccEECc
Confidence 999999764 899999999999986532 24798873
No 17
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=9.5e-17 Score=135.71 Aligned_cols=113 Identities=17% Similarity=0.325 Sum_probs=88.4
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECC----CCeEEeEeeCCCCCCCeeeeEEEEEe-ccCCCCCCCceEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDP----ERKLTTRVDQNGLNNPSWNEKFVFRV-DDRFLTDETSAIMI 75 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p----~~k~rTrV~k~gg~NP~WNEtF~F~V-~~~~L~~~~s~L~V 75 (377)
+..+.|+|+|++|++|+.. .+.+||||++++.+ ..+++|+++++ +.||+|||+|.|.+ ....+ ....|.|
T Consensus 18 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~~--~~~~l~i 94 (141)
T 1v27_A 18 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREF--RERMLEI 94 (141)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSS-CSSCCCCCCCEECSCCTTGG--GTCEEEE
T ss_pred CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccC-CCCCccccEEEEccCCHHHh--cCCEEEE
Confidence 3457899999999999754 57899999999943 35788998876 89999999999994 43222 3478999
Q ss_pred EEEEcCcCC---CceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC-CCCcce
Q 035970 76 EIYAAAWLK---DALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP-SGRPQG 126 (377)
Q Consensus 76 eVyD~d~~~---DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~-sGk~~G 126 (377)
+|||++.++ |++||++.|+|.++.... ...||+|... +|+..|
T Consensus 95 ~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~--------~~~W~~L~~~~~g~~sg 141 (141)
T 1v27_A 95 TLWDQARVREEESEFLGEILIELETALLDD--------EPHWYKLQTHDSGPSSG 141 (141)
T ss_dssp EEEEBCSSSSCCBCCCEEEEEEGGGCCCSS--------EEEEEECBCCSSCCCCC
T ss_pred EEEECCCCcCCCCceEEEEEEEccccCCCC--------CCceEECcccccCCCCC
Confidence 999999764 899999999999986532 3579999864 344443
No 18
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=2.9e-16 Score=135.08 Aligned_cols=104 Identities=21% Similarity=0.265 Sum_probs=86.3
Q ss_pred CeEEEEEEEEeecCCCC--CCCCCeEEEEEECC----CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEE
Q 035970 5 PRVLEISIVSGHDLALV--SKSMKTYSVAWVDP----ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIY 78 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p----~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVy 78 (377)
.+.|+|+|++|++|+.. .+.+||||++++.+ ..+++|+++++ +.||+|||+|.|.+....+ ...|.|+||
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~---~~~L~i~V~ 105 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKC-SLNPEWNETFRFQLKESDK---DRRLSVEIW 105 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSS-CSSCEEEEEEEEECCSGGG---GCEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCC-CCCCcCCcEEEEEeccccC---CCEEEEEEE
Confidence 46799999999999754 57899999999974 36789999876 8999999999999976422 357999999
Q ss_pred EcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC
Q 035970 79 AAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP 120 (377)
Q Consensus 79 D~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~ 120 (377)
|++.+ .|++||++.|+|.++.... ...||+|...
T Consensus 106 d~d~~~~~~~iG~~~i~l~~l~~~~--------~~~W~~L~~~ 140 (149)
T 1a25_A 106 DWDLTSRNDFMGSLSFGISELQKAG--------VDGWFKLLSQ 140 (149)
T ss_dssp ECCSSSCCEEEEEEEEEHHHHTTCC--------EEEEEECBCH
T ss_pred ECCCCCCCCEEEEEEEEHHHhCcCc--------cCCeEEccCC
Confidence 99976 6899999999999986542 3479999753
No 19
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=2.8e-16 Score=135.83 Aligned_cols=107 Identities=20% Similarity=0.336 Sum_probs=86.9
Q ss_pred CCeEEEEEEEEeecCCCC--CCCCCeEEEEEECC--CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEE
Q 035970 4 PPRVLEISIVSGHDLALV--SKSMKTYSVAWVDP--ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYA 79 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p--~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD 79 (377)
..+.|+|+|++|++|+.. .+.+||||++++.+ ..+++|+++++ +.||+|||+|.|.+....+ ....|.|+|||
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~L~i~V~d 116 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSEL--GGKTLVMAVYD 116 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTT-CSSCEEEEEEEECCCHHHH--TTCEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCC-CCCCcCcccEEEeecHHHc--CCCEEEEEEEE
Confidence 467899999999999753 57899999999963 35789999876 7999999999999864322 24789999999
Q ss_pred cCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC
Q 035970 80 AAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP 120 (377)
Q Consensus 80 ~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~ 120 (377)
++.+ .|++||++.|+|.++..+.. ...||+|..+
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~~~~-------~~~W~~L~~~ 151 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDFGHV-------TEEWRDLQSA 151 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCCSSC-------EEEEEECBCC
T ss_pred CCCCCCCcEEEEEEEEchhccCCCC-------cceEEECCCC
Confidence 9976 69999999999999865422 3579998743
No 20
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=3e-16 Score=134.01 Aligned_cols=106 Identities=11% Similarity=0.156 Sum_probs=85.7
Q ss_pred CCeEEEEEEEEeecCCCCCCCCCeEEEEEECCC---CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEc
Q 035970 4 PPRVLEISIVSGHDLALVSKSMKTYSVAWVDPE---RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAA 80 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~~~g~~DPYVvV~L~p~---~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~ 80 (377)
..+.|.|+|++|++ .+..+.+||||++++.+. .+++|+|+++ +.||+|||+|.|.+....+ ....|.|+|||+
T Consensus 24 ~~~~L~V~v~~a~~-~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~-tlnP~wnE~f~f~v~~~~l--~~~~L~~~V~d~ 99 (138)
T 1wfm_A 24 QKAELFVTRLEAVT-SNHDGGCDCYVQGSVANRTGSVEAQTALKKR-QLHTTWEEGLVLPLAEEEL--PTATLTLTLRTC 99 (138)
T ss_dssp TTTEEEEEEEEEEC-CCCSSCCCEEEEEEEEETTEEEEEECCCCCC-CSSEECSSCEEEECCTTSS--TTCEEEEEEEEC
T ss_pred CCCEEEEEEEEEEc-CCCCCCcceEEEEEEEcCCCcccEecccCcC-CCCCcCCceEEEEecHHHc--CCCEEEEEEEEC
Confidence 46789999999995 355688999999999542 3578998875 7999999999999986544 357899999999
Q ss_pred CcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC
Q 035970 81 AWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP 120 (377)
Q Consensus 81 d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~ 120 (377)
+.+ .|++||++.|+|.++..... ...||.|..+
T Consensus 100 d~~~~dd~lG~~~i~l~~l~~~~~-------~~~W~~L~~~ 133 (138)
T 1wfm_A 100 DRFSRHSVAGELRLGLDGTSVPLG-------AAQWGELKTS 133 (138)
T ss_dssp CSSCTTSCSEEEEEESSSSSSCTT-------CCEEEECCCC
T ss_pred CCCCCCcEEEEEEEEcccccCccc-------ccceeeCcCC
Confidence 965 68999999999999854321 3479999864
No 21
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=7.5e-17 Score=137.24 Aligned_cols=112 Identities=15% Similarity=0.194 Sum_probs=86.7
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCC----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPE----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIE 76 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~Ve 76 (377)
+..+.|+|+|++|++|+.. .+ +||||++++.+. .+++|+++++ +.||+|||+|.|.+....+ ....|.|+
T Consensus 21 ~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~L~i~ 96 (142)
T 2dmg_A 21 SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKK-TLNPVFDQSFDFSVSLPEV--QRRTLDVA 96 (142)
T ss_dssp TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCS-CSSCEEEEEEEECCCHHHH--HHCEEEEE
T ss_pred CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCC-CCCCCcCceEEEEecHHHh--CcCEEEEE
Confidence 3467899999999999753 57 999999999532 5789999875 8999999999999864322 13589999
Q ss_pred EEEcCcCC---CceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcc
Q 035970 77 IYAAAWLK---DALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQ 125 (377)
Q Consensus 77 VyD~d~~~---DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~ 125 (377)
|||++.+. |++||.+.|+|.++..... ...||+|...+++..
T Consensus 97 V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~-------~~~W~~L~~~~~~~~ 141 (142)
T 2dmg_A 97 VKNSGGFLSKDKGLLGKVLVALASEELAKG-------WTQWYDLTEDSGPSS 141 (142)
T ss_dssp EEECCCSSCCSCCCCEEEEEECCCSTTTTC-------BCCBCCCBCSCSCCC
T ss_pred EEECCCccccCCcEEEEEEEeccccccccc-------ccceeeccCCCCCCC
Confidence 99999653 5799999999999865422 236898887655443
No 22
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.68 E-value=2e-16 Score=135.96 Aligned_cols=109 Identities=14% Similarity=0.302 Sum_probs=88.1
Q ss_pred CCCeEEEEEEEEeecCCC---CCCCCCeEEEEEECCC----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEE
Q 035970 3 PPPRVLEISIVSGHDLAL---VSKSMKTYSVAWVDPE----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMI 75 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~---~~g~~DPYVvV~L~p~----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~V 75 (377)
+..+.|.|+|++|++|+. ..+.+||||++++.+. .+.+|+++++ +.||+|||+|.|.+....+ ....|.|
T Consensus 20 ~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~--~~~~L~~ 96 (148)
T 3fdw_A 20 QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRD-TVNPLYDETLRYEIPESLL--AQRTLQF 96 (148)
T ss_dssp TTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSS-CSSCEEEEEEEEECCSTTG--GGCEEEE
T ss_pred CCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCC-CCCCcEeeEEEEEeChhHh--CceEEEE
Confidence 346789999999999974 3578999999999753 3789998875 7999999999999886533 2457999
Q ss_pred EEEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCC
Q 035970 76 EIYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPS 121 (377)
Q Consensus 76 eVyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~s 121 (377)
+|||++.+ .|++||++.|+|.++..... ...||+|..+.
T Consensus 97 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~-------~~~W~~L~~~~ 136 (148)
T 3fdw_A 97 SVWHHGRFGRNTFLGEAEIQMDSWKLDKK-------LDHCLPLHGKI 136 (148)
T ss_dssp EEEEECGGGCEEEEEEEEEEHHHHHHHCC-------SEEEEECBCC-
T ss_pred EEEECCCCcCCcEEEEEEEEcccccccCC-------ccceEECcCcc
Confidence 99999966 68999999999999865432 24799998653
No 23
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=1.1e-15 Score=143.74 Aligned_cols=126 Identities=17% Similarity=0.304 Sum_probs=102.2
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCC--CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPE--RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIY 78 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~--~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVy 78 (377)
+..+.|.|+|++|++|... .+.+||||++++.+. .+.+|+++++ +.||.|||+|.|.+....+ ....|.|+||
T Consensus 16 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~--~~~~l~~~V~ 92 (284)
T 2r83_A 16 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSEL--AGKTLVMAVY 92 (284)
T ss_dssp TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGC--TTCEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHh--CcCEEEEEEE
Confidence 3567999999999999753 578999999999753 5788998875 7999999999999875433 3578999999
Q ss_pred EcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCC---CCcceEEEEEEEEEecC
Q 035970 79 AAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPS---GRPQGILNLGITLLDNT 138 (377)
Q Consensus 79 D~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~s---Gk~~G~L~LsV~f~p~s 138 (377)
|++.+ .|++||++.|+|.++..... ...||+|.... ....|+|.+.+.+.+..
T Consensus 93 d~d~~~~~~~lG~~~i~l~~l~~~~~-------~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~ 149 (284)
T 2r83_A 93 DFDRFSKHDIIGEFKVPMNTVDFGHV-------TEEWRDLQSAEKEEQEKLGDICFSLRYVPTA 149 (284)
T ss_dssp ECCSSSCCCEEEEEEEEGGGCCCSSC-------EEEEEECBCCSSCCCCCCCEEEEEEEEETTT
T ss_pred ECCCCCCCceeEEEEEcchhcccCCc-------ceeEEEeeccccccccccccEEEEEEecCcC
Confidence 99976 68999999999999866422 35799998653 24689999999988654
No 24
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=3.2e-16 Score=133.39 Aligned_cols=108 Identities=19% Similarity=0.307 Sum_probs=86.6
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECC--CCeEEeEeeCCCCCCCeeeeEEEEEecc-CCCCCCCceEEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDP--ERKLTTRVDQNGLNNPSWNEKFVFRVDD-RFLTDETSAIMIEI 77 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p--~~k~rTrV~k~gg~NP~WNEtF~F~V~~-~~L~~~~s~L~VeV 77 (377)
+..+.|+|+|++|++|+.. .+.+||||++++.+ ..+++|+++++ +.||+|||+|.|.+.+ ..+ ....|.|+|
T Consensus 23 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~--~~~~l~i~V 99 (141)
T 2d8k_A 23 FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRK-NLNPHWNETFLFEGFPYEKV--VQRILYLQV 99 (141)
T ss_dssp SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTT-CSSCCCCEEEEECSCCHHHH--TTSEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcC-CCCCccccEEEECccCHHHc--ccCEEEEEE
Confidence 4567899999999999754 57899999999953 36789999865 8999999999998532 111 247899999
Q ss_pred EEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC
Q 035970 78 YAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP 120 (377)
Q Consensus 78 yD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~ 120 (377)
||++.+ .|++||++.|+|.++..... ...||+|...
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~l~~~~~-------~~~W~~L~~~ 136 (141)
T 2d8k_A 100 LDYDRFSRNDPIGEVSIPLNKVDLTQM-------QTFWKDLKPS 136 (141)
T ss_dssp EECCSSSSCEEEEEEEEETTTSCTTSC-------EEEEECCEEC
T ss_pred EECCCCCCCcEEEEEEEEhhhhcCCCC-------ccEEEECcCC
Confidence 999975 68999999999999876432 3579998854
No 25
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=7e-16 Score=130.85 Aligned_cols=107 Identities=19% Similarity=0.286 Sum_probs=85.4
Q ss_pred CCeEEEEEEEEeecCCCC---CCCCCeEEEEEECC--CCeEEeEeeCCCCCCCeeeeEEEEE-eccCCCCCCCceEEEEE
Q 035970 4 PPRVLEISIVSGHDLALV---SKSMKTYSVAWVDP--ERKLTTRVDQNGLNNPSWNEKFVFR-VDDRFLTDETSAIMIEI 77 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~~---~g~~DPYVvV~L~p--~~k~rTrV~k~gg~NP~WNEtF~F~-V~~~~L~~~~s~L~VeV 77 (377)
..+.|+|+|++|++|+.. .+.+||||++++.+ ..+++|+++++ +.||+|||+|.|. +....+ ....|.|+|
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~~--~~~~l~i~V 96 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRK-TLDPAFDETFTFYGIPYTQI--QELALHFTI 96 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSS-CSSCEEEEEEEEECCCSTTG--GGCEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcC-CCCCcEeeEEEEcCcCHHHh--ccCEEEEEE
Confidence 457899999999999753 37899999999974 36889999875 8999999999996 765433 246899999
Q ss_pred EEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeC
Q 035970 78 YAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRR 119 (377)
Q Consensus 78 yD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr 119 (377)
||++.+ .|++||++.|+|.++..... ....|+.|..
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~~~------~~~~~~~l~~ 133 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELSEG------KMLMNREIIS 133 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCTTC------CEEEEEECBS
T ss_pred EECCCCCCCcEEEEEEEehhHccCCCC------cchhhhhhhc
Confidence 999966 68999999999999876432 1345777764
No 26
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.66 E-value=1.3e-16 Score=140.12 Aligned_cols=107 Identities=12% Similarity=0.118 Sum_probs=86.0
Q ss_pred CCCeEEEEEEEEeecCCC--CCCCCCeEEEEEECC---C--CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEE
Q 035970 3 PPPRVLEISIVSGHDLAL--VSKSMKTYSVAWVDP---E--RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMI 75 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~--~~g~~DPYVvV~L~p---~--~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~V 75 (377)
+..+.|+|+|++|++|+. .++.+||||++++.+ . .+++|+|+++ +.||+|||+|.|.|....+ ....|.|
T Consensus 40 ~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~-tlnP~wnE~F~f~v~~~~l--~~~~L~~ 116 (155)
T 2z0u_A 40 EKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDA-SDTLVFNEVFWVSMSYPAL--HQKTLRV 116 (155)
T ss_dssp TTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEEC-CSSEEEEEEEEEECCHHHH--HHCEEEE
T ss_pred CCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCC-CCCCccccEEEEEcCHHHh--CcCEEEE
Confidence 356789999999999964 468999999999975 2 3789999876 7999999999999875322 2468999
Q ss_pred EEEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEee
Q 035970 76 EIYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVR 118 (377)
Q Consensus 76 eVyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lr 118 (377)
+|||++.+ +|++||++.|+|.++.... .....||.|.
T Consensus 117 ~V~d~d~~~~~d~iG~~~i~l~~l~~~~------~~~~~W~~L~ 154 (155)
T 2z0u_A 117 DVCTTDRSHLEECLGGAQISLAEVCRSG------ERSTRWYNLL 154 (155)
T ss_dssp EEEEECTTSCEEEEEEEEEECTTSCTTC------CCEEEEEEEB
T ss_pred EEEECCCCCCCcEEEEEEEEHHHccCCC------CccccceEcc
Confidence 99999965 6899999999999985321 1245799885
No 27
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=1.2e-16 Score=136.99 Aligned_cols=107 Identities=13% Similarity=0.170 Sum_probs=84.7
Q ss_pred CCCeEEEEEEEEeecCCCC---------CCCCCeEEEEEECC--CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCc
Q 035970 3 PPPRVLEISIVSGHDLALV---------SKSMKTYSVAWVDP--ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETS 71 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~---------~g~~DPYVvV~L~p--~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s 71 (377)
+..+.|+|+|++|++|+.. .+.+||||+|++.+ ..+++|+|+++ +.||+|||+|.|.+....+ ...
T Consensus 23 ~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~ 99 (147)
T 2enp_A 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRK-TQKPVFEERYTFEIPFLEA--QRR 99 (147)
T ss_dssp TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCS-CSSCCCCBCCEECCCHHHH--HHS
T ss_pred CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccC-CCCCeEeeeEEEEeChHHh--ccC
Confidence 4567899999999999752 24799999999974 35789999875 7999999999999875322 135
Q ss_pred eEEEEEEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeC
Q 035970 72 AIMIEIYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRR 119 (377)
Q Consensus 72 ~L~VeVyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr 119 (377)
.|.|+|||++.+ .|++||++.|+|.++..... ...||.|..
T Consensus 100 ~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~-------~~~w~~L~~ 141 (147)
T 2enp_A 100 TLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKG-------GHWWKALIP 141 (147)
T ss_dssp EEEEEEECCSTTCCSCCCEEEEEETTTSCTTTC-------CCEEECCBC
T ss_pred EEEEEEEECCCCcCCcEEEEEEEechhcCCCCC-------ccEEEEeec
Confidence 899999999965 58899999999999865432 236887764
No 28
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.66 E-value=2.9e-16 Score=133.64 Aligned_cols=107 Identities=19% Similarity=0.348 Sum_probs=85.2
Q ss_pred CCeEEEEEEEEeecCCCC--CCCCCeEEEEEECC----CCeEEeEeeCCCCCCCeeeeEEEEE-eccCCCCCCCceEEEE
Q 035970 4 PPRVLEISIVSGHDLALV--SKSMKTYSVAWVDP----ERKLTTRVDQNGLNNPSWNEKFVFR-VDDRFLTDETSAIMIE 76 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p----~~k~rTrV~k~gg~NP~WNEtF~F~-V~~~~L~~~~s~L~Ve 76 (377)
+.+.|.|+|++|++|+.. .+.+||||++++.+ ..+++|+++++ +.||+|||+|.|. +....+ ....|.|+
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~--~~~~l~i~ 103 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRN-TRNPVWNETLQYHGITEEDM--QRKTLRIS 103 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCS-CSSCEEEEEEEEESCCHHHH--HHCEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCC-CCCCcCcCEEEEcccCHHHc--cCCEEEEE
Confidence 457899999999999754 57899999999975 26789999875 8999999999998 653211 12589999
Q ss_pred EEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC
Q 035970 77 IYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP 120 (377)
Q Consensus 77 VyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~ 120 (377)
|||++.+ .|++||++.|+|.++..... ...|+.|..+
T Consensus 104 V~d~d~~~~d~~iG~~~i~l~~l~~~~~-------~~~~~~L~~p 141 (142)
T 2chd_A 104 VCDEDKFGHNEFIGETRFSLKKLKANQR-------KNFNICLERV 141 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEGGGCCTTCC-------EEEEEECBCC
T ss_pred EEECCCCCCCcEEEEEEEEHHHcCCCCc-------cEEEEecccC
Confidence 9999976 58999999999999876532 3567777543
No 29
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.65 E-value=4.6e-16 Score=134.81 Aligned_cols=109 Identities=18% Similarity=0.258 Sum_probs=86.6
Q ss_pred CCCeEEEEEEEEeecCCCC-CCCCCeEEEEEECC----CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV-SKSMKTYSVAWVDP----ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEI 77 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~-~g~~DPYVvV~L~p----~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeV 77 (377)
+..+.|.|+|++|++|+.. .+.+||||++++.+ ..+.+|+++++ +.||+|||+|.|.+....+ ...|.|+|
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~---~~~L~i~V 99 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPD-CRDPAFHEHFFFPVQEEDD---QKRLLVTV 99 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTT-CSSCEEEEEEEEECCGGGT---TSEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCC-CCCCccccEEEEecccHHh---CCEEEEEE
Confidence 3567899999999999754 47899999999953 25789999875 8999999999999954433 34699999
Q ss_pred EEcCcC-C-CceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCC
Q 035970 78 YAAAWL-K-DALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPS 121 (377)
Q Consensus 78 yD~d~~-~-DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~s 121 (377)
||++.+ + |++||++.|+|.++.... .....||+|....
T Consensus 100 ~d~d~~~~~d~~lG~~~i~l~~l~~~~------~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 100 WNRASQSRQSGLIGCMSFGVKSLLTPD------KEISGWYYLLGEH 139 (153)
T ss_dssp EECCSSGGGCEEEEEEEEEHHHHTC--------CCEEEEEECBCTT
T ss_pred EeCCCCCCCCcEEEEEEEEHHHhcCCC------CccccEEECCChh
Confidence 999975 4 899999999999987421 1135799998654
No 30
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.65 E-value=6.6e-16 Score=129.91 Aligned_cols=104 Identities=19% Similarity=0.277 Sum_probs=85.7
Q ss_pred CeEEEEEEEEeecCCC--CCCCCCeEEEEEECC----CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEE
Q 035970 5 PRVLEISIVSGHDLAL--VSKSMKTYSVAWVDP----ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIY 78 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~--~~g~~DPYVvV~L~p----~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVy 78 (377)
.+.|.|+|++|++|+. ..+.+||||++++.+ ..+.+|+++++ +.||.|||+|.|.+....+ ...|.|+||
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~---~~~l~i~v~ 90 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRS-TLNPQWNESFTFKLKPSDK---DRRLSVEIW 90 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCS-CSSCEEEEEEEEECCGGGG---GCEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcC-CCCCCcccEEEEEcCchhc---CCEEEEEEE
Confidence 4789999999999975 457899999999953 35789999876 7999999999999875432 357999999
Q ss_pred EcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC
Q 035970 79 AAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP 120 (377)
Q Consensus 79 D~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~ 120 (377)
|++.+ .|++||.+.|+|.++.... ...||+|...
T Consensus 91 d~d~~~~~~~iG~~~i~l~~l~~~~--------~~~W~~L~~~ 125 (137)
T 3rdl_A 91 DWDRTTRNDFMGSLSFGVSELMKMP--------ASGWYKLLNQ 125 (137)
T ss_dssp ECCSSSCCEEEEEEEEEHHHHHHSC--------EEEEEECBCH
T ss_pred ECCCCCCCceEEEEEEeHHHhccCc--------cCceEECcCc
Confidence 99866 6899999999999996542 3579999853
No 31
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=1.3e-16 Score=135.58 Aligned_cols=107 Identities=15% Similarity=0.230 Sum_probs=84.6
Q ss_pred CeEEEEEEEEeecCCCC--CCCCCeEEEEEECCC-------------CeEEeEeeCCCCCCCeeeeEEEEE-eccCCCCC
Q 035970 5 PRVLEISIVSGHDLALV--SKSMKTYSVAWVDPE-------------RKLTTRVDQNGLNNPSWNEKFVFR-VDDRFLTD 68 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~-------------~k~rTrV~k~gg~NP~WNEtF~F~-V~~~~L~~ 68 (377)
.+.|.|+|++|++|+.. .+.+||||++++.+. .+.+|+++++ +.||+|||+|.|. +....+
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~l-- 93 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQK-SLNPEWNQTVIYKSISMEQL-- 93 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHH-HHSCEEEEEEEECSCCHHHH--
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCC-CCCCCCCCEEEECCcCHHHc--
Confidence 36899999999999754 578999999999853 2467888775 7999999999997 653212
Q ss_pred CCceEEEEEEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCC
Q 035970 69 ETSAIMIEIYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPS 121 (377)
Q Consensus 69 ~~s~L~VeVyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~s 121 (377)
....|.|+|||++.+ .|++||.+.|+|.++..... ...||+|...+
T Consensus 94 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~-------~~~W~~L~~~~ 140 (142)
T 1rh8_A 94 MKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDN-------TPRWYPLKEQT 140 (142)
T ss_dssp TTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTT-------CCEEEECBCCC
T ss_pred cCCEEEEEEEECCCCCCCceEEEEEEeccccccCCC-------CCeEEECCccC
Confidence 246899999999976 58999999999999865422 24799998653
No 32
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.64 E-value=7.1e-16 Score=129.62 Aligned_cols=94 Identities=20% Similarity=0.363 Sum_probs=78.2
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCC----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPE----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIE 76 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~Ve 76 (377)
+..+.|.|+|++|++|+.. .+.+||||++++.+. .+.+|+++++ +.||+|||+|.|.+....+ ....|.|+
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~v~~~~l--~~~~l~~~ 89 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKR-NLNPIFNESFAFDIPTEKL--RETTIIIT 89 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSS-CSSCEEEEEEEEECCGGGG--GGEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccC-CCCCcCcceEEEECChhhc--CceEEEEE
Confidence 3568899999999999753 578999999999753 4678988875 7999999999999876533 24689999
Q ss_pred EEEcCcC-CCceeEEEEEEccccc
Q 035970 77 IYAAAWL-KDALIGSVRVLISHLF 99 (377)
Q Consensus 77 VyD~d~~-~DdlIG~a~IpLs~L~ 99 (377)
|||++.+ .|++||++.|+|.++.
T Consensus 90 V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 90 VMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EEECCSSSCCEEEEEEEESSSSCH
T ss_pred EEECCCCCCCcEEEEEEEccccCC
Confidence 9999966 6899999999998754
No 33
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.63 E-value=1.4e-15 Score=134.66 Aligned_cols=104 Identities=14% Similarity=0.266 Sum_probs=85.3
Q ss_pred CeEEEEEEEEeecCCCC---CCCCCeEEEEEECCC----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEE
Q 035970 5 PRVLEISIVSGHDLALV---SKSMKTYSVAWVDPE----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEI 77 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~~---~g~~DPYVvV~L~p~----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeV 77 (377)
.+.|+|+|++|++|... .+.+||||+|++.+. .+++|+|+++ +.||+|||+|.|.+.. ....|.|+|
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~-----~~~~L~~~V 102 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARK-TLDPLYQQSLVFDESP-----QGKVLQVIV 102 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEECSSCC-----TTEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCC-CCCCCCCcEEEEEecC-----CCCEEEEEE
Confidence 46899999999999753 478999999999753 3778998875 7999999999999864 358899999
Q ss_pred E-EcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCC
Q 035970 78 Y-AAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPS 121 (377)
Q Consensus 78 y-D~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~s 121 (377)
| |++.+ .|++||++.|+|.++..... ...||+|...+
T Consensus 103 ~~d~d~~~~d~~iG~~~i~l~~l~~~~~-------~~~W~~L~~~~ 141 (171)
T 2q3x_A 103 WGDYGRMDHKCFMGVAQILLEELDLSSM-------VIGWYKLFPPS 141 (171)
T ss_dssp EEECSTTCSSEEEEEEEECGGGSCTTSC-------EEEEEECBCGG
T ss_pred EEcCCCCCCCCEEEEEEEEHHHcccCCC-------cceeEECCCcc
Confidence 9 99866 58999999999999865422 35799998653
No 34
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.63 E-value=3.5e-15 Score=131.25 Aligned_cols=119 Identities=14% Similarity=0.218 Sum_probs=101.2
Q ss_pred EEEEEEEEeecCCCCCCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEcCc-CCC
Q 035970 7 VLEISIVSGHDLALVSKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAAAW-LKD 85 (377)
Q Consensus 7 ~LeVtVISAkdL~~~~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~d~-~~D 85 (377)
.|.|+|.+|.+|+ ++.||||.+.+- ..+++|+++++++.||+|||.|.|++..+. +..+.|.|.|||++. ++|
T Consensus 22 sL~V~l~~a~~Lp---g~~Dp~akv~FR-g~k~kTkvi~~~~~npvfnE~F~wpl~~~l--d~~e~L~v~V~d~~~v~~n 95 (144)
T 3l9b_A 22 ALIVHLKTVSELR---GRADRIAKVTFR-GQSFYSRVLENCEDVADFDETFRWPVASSI--DRNEVLEIQIFNYSKVFSN 95 (144)
T ss_dssp EEEEEEEEEESCC---SCEEEEEEEEET-TEEEECCCEEEECSCEEEEEEEEEEESSCC--CTTCEEEEEEEEECTTSCC
T ss_pred EEEEEEEEecCCC---CCCCCeEEEEEe-ccceeeEEeccCCCCceEcceEEecCCCCC--CCCCEEEEEEEECccccCC
Confidence 6899999999998 588999999996 478999999755799999999999998753 477899999999985 589
Q ss_pred ceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCc-ceEEEEEEEEEecC
Q 035970 86 ALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRP-QGILNLGITLLDNT 138 (377)
Q Consensus 86 dlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~-~G~L~LsV~f~p~s 138 (377)
++||++.|+|.++...+. ..++.+|.+.+.++ .++|.|.|+|.+..
T Consensus 96 rlIG~~~i~Lq~lv~~~~-------l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 96 KLIGTFRMVLQKVVEENR-------VEVSDTLIDDNNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp EEEEEEEEESHHHHHHSE-------EEEEEEEECTTSCEEEEEEEEEEEEEETT
T ss_pred CEEEEEEEEhHHhccCCe-------EEEeecccCCCCCccccEEEEEEEecCCC
Confidence 999999999999987643 23577888887765 47899999999875
No 35
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.63 E-value=2e-15 Score=131.16 Aligned_cols=114 Identities=19% Similarity=0.244 Sum_probs=85.7
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCC----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPE----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIE 76 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~Ve 76 (377)
+..+.|+|+|++|++|+.. .+.+||||++++.+. .+.+|+++++ +.||+|||+|.|.+....+ ....|.|+
T Consensus 22 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~l~i~ 98 (159)
T 1tjx_A 22 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQI--QKVQVVVT 98 (159)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCGGGG--GGCEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecC-CCCCcccceEEEEcCHHHh--CCcEEEEE
Confidence 4567999999999999754 578999999999643 4678998775 7999999999999875433 24579999
Q ss_pred EEEcCcC-CCceeEEEEEEcccccCCccc-----CCCCCceeEEEEeeC
Q 035970 77 IYAAAWL-KDALIGSVRVLISHLFGTLTH-----NSSSSTRYVALQVRR 119 (377)
Q Consensus 77 VyD~d~~-~DdlIG~a~IpLs~L~~~~~~-----~~~~~~~~v~y~Lrr 119 (377)
|||++.+ .|++||.+.|+|..+..+..| .........||+|..
T Consensus 99 V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 99 VLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp EEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred EEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 9999976 599999999999864211110 001123457998875
No 36
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.62 E-value=2e-15 Score=132.17 Aligned_cols=94 Identities=20% Similarity=0.336 Sum_probs=79.0
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCC----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPE----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIE 76 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~Ve 76 (377)
+..+.|.|+|++|++|+.. .+.+||||++++.+. .+++|+++++ +.||+|||+|.|.+....+ ....|.|+
T Consensus 34 ~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~L~i~ 110 (166)
T 2cm5_A 34 TQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKK-TLNPEFNEEFFYDIKHSDL--AKKSLDIS 110 (166)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCS-CSSCEEEEEEEEECCGGGG--GGCEEEEE
T ss_pred CCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccC-CCCCcccceEEEEcchHhc--CCCEEEEE
Confidence 3567899999999999753 578999999999752 6789999875 8999999999999975433 24689999
Q ss_pred EEEcCcC-CCceeEEEEEEccccc
Q 035970 77 IYAAAWL-KDALIGSVRVLISHLF 99 (377)
Q Consensus 77 VyD~d~~-~DdlIG~a~IpLs~L~ 99 (377)
|||++.+ .|++||++.|+|.++.
T Consensus 111 V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 111 VWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp EEECCSSSCCEEEEEEEEETTCCH
T ss_pred EEECCCCCCCcEEEeEEEecccCC
Confidence 9999976 6899999999999853
No 37
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.61 E-value=7.3e-15 Score=155.29 Aligned_cols=118 Identities=20% Similarity=0.252 Sum_probs=99.1
Q ss_pred CCeEEEEEEEEeecCCCC----CCCCCeEEEEEECCC----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEE
Q 035970 4 PPRVLEISIVSGHDLALV----SKSMKTYSVAWVDPE----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMI 75 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~~----~g~~DPYVvV~L~p~----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~V 75 (377)
....|.|+|++|++|+.. .+.+||||+|++.+. .+.+|+++++++.||+|||+|.|.|..+.+ ..|.|
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el----~~L~~ 570 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDL----ALVRF 570 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGG----CEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCC----CEEEE
Confidence 457899999999999754 468999999999542 578999988766999999999999986543 68999
Q ss_pred EEEEcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCc--ceEEEEEEEEE
Q 035970 76 EIYAAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRP--QGILNLGITLL 135 (377)
Q Consensus 76 eVyD~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~--~G~L~LsV~f~ 135 (377)
+|||++.+ +|++||++.|||.+|..+. .+++|++..|.+ .+.|.|.|.|.
T Consensus 571 ~V~D~D~~~~dd~iG~~~ipl~~L~~G~----------r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 571 MVEDYDSSSKNDFIGQSTIPWNSLKQGY----------RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGBCCEE----------EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEEEcCCCCCCceeEEEEEEHHHcCCCc----------EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 99999965 7999999999999997653 589999988874 57888888875
No 38
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.60 E-value=3.9e-15 Score=128.31 Aligned_cols=92 Identities=18% Similarity=0.226 Sum_probs=75.1
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECCC----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDPE----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIE 76 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p~----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~Ve 76 (377)
+..+.|.|+|++|++|+.. .+.+||||+|++.++ .+++|+++++ +.||+|||+|.|.+....+ ....|.|+
T Consensus 27 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~l~v~ 103 (153)
T 1w15_A 27 STTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC-TPNAVFNELFVFDIPCESL--EEISVEFL 103 (153)
T ss_dssp TTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCS-CSSEEEEEEEEEECCSSSS--TTEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccC-CCCCeecceEEEECCHHHh--CceEEEEE
Confidence 3567899999999999753 578999999999532 2668998875 8999999999999987544 34789999
Q ss_pred EEEcCcC-CCceeEEEEEEccc
Q 035970 77 IYAAAWL-KDALIGSVRVLISH 97 (377)
Q Consensus 77 VyD~d~~-~DdlIG~a~IpLs~ 97 (377)
|||++.+ .|++||.+.|+|.+
T Consensus 104 V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 104 VLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EEECCTTSCCEEEEEEEESTTC
T ss_pred EEeCCCCCCCcEEEEEEECCCC
Confidence 9999966 68999999999988
No 39
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.58 E-value=1.6e-14 Score=137.67 Aligned_cols=127 Identities=22% Similarity=0.290 Sum_probs=97.4
Q ss_pred CCCeEEEEEEEEeecCCC--CCCCCCeEEEEEECC--CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEE
Q 035970 3 PPPRVLEISIVSGHDLAL--VSKSMKTYSVAWVDP--ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIY 78 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~--~~g~~DPYVvV~L~p--~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVy 78 (377)
...+.|.|+|++|++|+. ..+.+||||++++.+ ..+++|+|+++ +.||+|||+|.|.+....+ ....|.|+||
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~L~~~V~ 93 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAEL--AQRKLHFSVY 93 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGG--SSCCCEEEEE
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHh--cCCEEEEEEE
Confidence 356889999999999974 367899999999953 46789999875 7999999999999875433 2468999999
Q ss_pred EcCcC-CCceeEEEEEE-cccccCCcccCCCCCceeEEEEeeCCC--CCcceEEEEEEEEEecC
Q 035970 79 AAAWL-KDALIGSVRVL-ISHLFGTLTHNSSSSTRYVALQVRRPS--GRPQGILNLGITLLDNT 138 (377)
Q Consensus 79 D~d~~-~DdlIG~a~Ip-Ls~L~~~~~~~~~~~~~~v~y~Lrr~s--Gk~~G~L~LsV~f~p~s 138 (377)
|++.+ +|++||++.|+ |.++..... ....|+.|.... ....|+|.+.+.+.+..
T Consensus 94 d~d~~~~~~~iG~~~i~~l~~~~~~~~------~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~ 151 (296)
T 1dqv_A 94 DFDRFSRHDLIGQVVLDNLLELAEQPP------DRPLWRDILEGGSEKADLGELNFSLCYLPTA 151 (296)
T ss_dssp ECCSSSCCCEEEEEECCCTTGGGSSCS------SCCCCEECBCCSSCCSCCCEEEEEEEEETTT
T ss_pred EcCCCCCCceEEEEEeccccccccCCc------cceeeeccccccccccccceEEEEEEecccc
Confidence 99965 69999999996 444433211 123588887543 34689999999987754
No 40
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.53 E-value=4e-14 Score=143.41 Aligned_cols=120 Identities=16% Similarity=0.252 Sum_probs=95.6
Q ss_pred CCeEEEEEEEEeecCCC--CCCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEcC
Q 035970 4 PPRVLEISIVSGHDLAL--VSKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAAA 81 (377)
Q Consensus 4 p~g~LeVtVISAkdL~~--~~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~d 81 (377)
..+.|.|+|++|++|+. ..+.+||||++++++ .+.+|+|+++ +.||.|||+|.|.+... ....|.|+|||++
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~-~~~~T~~~~~-t~nP~w~e~f~f~~~~~----~~~~l~~~v~d~d 458 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGS-QSYTTRTIQD-TLNPKWNFNCQFFIKDL----YQDVLCLTLFDRD 458 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT-EEEECCCCSS-CSSCEEEEEEEEEESCT----TTCEEEEEEEECC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECC-eeccCCccCC-CCCCccCceEEEEecCC----CCCEEEEEEEeCC
Confidence 45789999999999964 468899999999974 6889999876 79999999999999754 3478999999999
Q ss_pred cC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceEEEEEEEEE
Q 035970 82 WL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGILNLGITLL 135 (377)
Q Consensus 82 ~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~L~LsV~f~ 135 (377)
.+ .|++||++.++|.++..+.... .....|+.+. ++..|+|.|.+.+.
T Consensus 459 ~~~~~d~lG~~~~~l~~l~~~~~~~---~~~~~~~~l~---~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 459 QFSPDDFLGRTEIPVAKIRTEQESK---GPMTRRLLLH---EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSSSCCEEEEEEEEHHHHHHHHHHH---CSCCEEEECB---SSSSCEEEEEEEEE
T ss_pred CCCCCCceEEEEEEHHHhccccCCC---CceeeeecCC---CCCCceEEEEEEEE
Confidence 76 5899999999999987643211 1123677765 45789998888763
No 41
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.46 E-value=5.1e-13 Score=145.06 Aligned_cols=116 Identities=23% Similarity=0.274 Sum_probs=96.3
Q ss_pred CeEEEEEEEEeecCCCCCCCCCeEEEEEECCC------CeEEeEeeCCCCCCCeeeeE-EEEE-eccCCCCCCCceEEEE
Q 035970 5 PRVLEISIVSGHDLALVSKSMKTYSVAWVDPE------RKLTTRVDQNGLNNPSWNEK-FVFR-VDDRFLTDETSAIMIE 76 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~~~g~~DPYVvV~L~p~------~k~rTrV~k~gg~NP~WNEt-F~F~-V~~~~L~~~~s~L~Ve 76 (377)
...|.|+|++|++|++ ..+||||+|.+.+. .+++|+|+++++.||+|||+ |.|. |..+.+ ..|.|+
T Consensus 649 ~~~L~V~Visaq~L~~--~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel----a~Lrf~ 722 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD--KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL----AVVRII 722 (816)
T ss_dssp CEEEEEEEEEEECCCS--SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG----CEEEEE
T ss_pred ceEEEEEEEEcccCCC--CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc----cEEEEE
Confidence 4689999999999975 36899999999642 46799998877899999998 9998 765543 689999
Q ss_pred EEEcCcCCCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCc--ceEEEEEEEEEecCC
Q 035970 77 IYAAAWLKDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRP--QGILNLGITLLDNTM 139 (377)
Q Consensus 77 VyD~d~~~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~--~G~L~LsV~f~p~s~ 139 (377)
|||++ |+|||++.|||..|.+++ .+++|++..|.+ .+.|.+.|.+.+...
T Consensus 723 V~D~d---ddfiG~~~ipL~~L~~Gy----------R~vpL~~~~g~~~~~atLfv~i~~~~~~~ 774 (816)
T 3qr0_A 723 VSEEN---GKFIGHRVMPLDGIKPGY----------RHVPLRNESNRPLGLASVFAHIVAKDYVS 774 (816)
T ss_dssp EEETT---SCEEEEEEEESTTCCCEE----------EEEEEECTTSCEEEEEEEEEEEEEEECCC
T ss_pred EEecC---CCeeeEEEEEHHHcCCcc----------eEEEEeCCCCCCCCceEEEEEEEEEecCc
Confidence 99985 899999999999998764 478999988865 368888888887653
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.45 E-value=3.1e-13 Score=126.90 Aligned_cols=115 Identities=20% Similarity=0.246 Sum_probs=85.6
Q ss_pred CCCeEEEEEEEEeecCCC--CCCCCCeEEEEEECCC----CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEE
Q 035970 3 PPPRVLEISIVSGHDLAL--VSKSMKTYSVAWVDPE----RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIE 76 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~--~~g~~DPYVvV~L~p~----~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~Ve 76 (377)
+..+.|.|+|++|++|.. ..+.+||||++++.++ .+.+|+|+++ +.||+|||+|.|.+....+ ....|.|+
T Consensus 147 p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~l~i~ 223 (284)
T 2r83_A 147 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQI--QKVQVVVT 223 (284)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCTTTG--GGEEEEEE
T ss_pred CcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEceeEEEeCCHHHh--CceEEEEE
Confidence 346789999999999974 3578999999998532 3578888765 7999999999999976543 24579999
Q ss_pred EEEcCcC-CCceeEEEEEEcccccCCccc-----CCCCCceeEEEEeeCC
Q 035970 77 IYAAAWL-KDALIGSVRVLISHLFGTLTH-----NSSSSTRYVALQVRRP 120 (377)
Q Consensus 77 VyD~d~~-~DdlIG~a~IpLs~L~~~~~~-----~~~~~~~~v~y~Lrr~ 120 (377)
|||++.+ .|++||++.|+|..+..+..| .........||+|...
T Consensus 224 V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 224 VLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred EEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 9999975 689999999999864322111 0011234579988753
No 43
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.45 E-value=3.5e-13 Score=147.35 Aligned_cols=115 Identities=22% Similarity=0.295 Sum_probs=96.0
Q ss_pred CeEEEEEEEEeecCCCCCCCCCeEEEEEECC---C--CeEEeEeeCCCCCCCeeee-EEEEE-eccCCCCCCCceEEEEE
Q 035970 5 PRVLEISIVSGHDLALVSKSMKTYSVAWVDP---E--RKLTTRVDQNGLNNPSWNE-KFVFR-VDDRFLTDETSAIMIEI 77 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~~~g~~DPYVvV~L~p---~--~k~rTrV~k~gg~NP~WNE-tF~F~-V~~~~L~~~~s~L~VeV 77 (377)
...|.|+||+|++|+. ..+||||+|.+.+ + .+++|+|+++++.||+||| +|.|. |..+.+ ..|.|+|
T Consensus 724 ~~~L~V~Visaq~L~~--~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pel----a~Lrf~V 797 (885)
T 3ohm_B 724 ANALRVKVISGQFLSD--RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL----ASLRIAA 797 (885)
T ss_dssp CEEEEEEEEEEESCCS--SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGG----CEEEEEE
T ss_pred ceEEEEEEEEeccCcc--cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCc----CEEEEEE
Confidence 4589999999999975 3689999999964 2 3578999887789999999 69998 765433 5899999
Q ss_pred EEcCcCCCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCc--ceEEEEEEEEEecC
Q 035970 78 YAAAWLKDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRP--QGILNLGITLLDNT 138 (377)
Q Consensus 78 yD~d~~~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~--~G~L~LsV~f~p~s 138 (377)
||++ |+|||++.|||..|.+++ .+++|++..|.+ .+.|.|.|.+.+..
T Consensus 798 ~D~d---ddfiG~~~lpL~~L~~Gy----------R~vpL~~~~g~~l~~atLfv~i~~~~~~ 847 (885)
T 3ohm_B 798 FEEG---GKFVGHRILPVSAIRSGY----------HYVCLRNEANQPLCLPALLIYTEASDYI 847 (885)
T ss_dssp EETT---TEEEEEEEEETTTCCCEE----------EEEEEECTTSCEEEEEEEEEEEEEEECC
T ss_pred EcCC---ccEEeeEEEEHHHcCCCc----------eEEEecCCCCCccCceEEEEEEEEEecC
Confidence 9987 899999999999998764 468899888864 78999999998765
No 44
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.43 E-value=8.3e-13 Score=143.22 Aligned_cols=112 Identities=21% Similarity=0.325 Sum_probs=92.0
Q ss_pred CeEEEEEEEEeecCCCCCCCCCeEEEEEECC---C--CeEEeE-eeCCCCCCCeeee-EEEE-EeccCCCCCCCceEEEE
Q 035970 5 PRVLEISIVSGHDLALVSKSMKTYSVAWVDP---E--RKLTTR-VDQNGLNNPSWNE-KFVF-RVDDRFLTDETSAIMIE 76 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~~~g~~DPYVvV~L~p---~--~k~rTr-V~k~gg~NP~WNE-tF~F-~V~~~~L~~~~s~L~Ve 76 (377)
.+.|.|+|++|++|++ +.+||||+|.+.+ + .+++|+ ++++++.||+||| +|.| .|..+.+ ..|.|+
T Consensus 677 ~~~L~V~Visa~~L~~--~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el----~~Lr~~ 750 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE--RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPEL----ASLRVA 750 (799)
T ss_dssp CEEEEEEEEEEESCCS--SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGG----CEEEEE
T ss_pred eeeEEEEEEeccccCc--cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCc----cEEEEE
Confidence 5689999999999975 4789999999953 2 368999 8877789999999 7999 8876544 589999
Q ss_pred EEEcCcCCCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCC--cceEEEEEEEEE
Q 035970 77 IYAAAWLKDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGR--PQGILNLGITLL 135 (377)
Q Consensus 77 VyD~d~~~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk--~~G~L~LsV~f~ 135 (377)
|||++ |++||++.|||..|.++. .+++|++..|. ..+.|.|.|.+.
T Consensus 751 V~D~d---~d~iG~~~ipl~~L~~G~----------r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 751 VMEEG---NKFLGHRIIPINALNSGY----------HHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEETT---TEEEEEEEEEGGGBCCEE----------EEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEeC---CCccceEeeehhhcCCCc----------EEEeccCCCCCCCCceEEEEEEEEE
Confidence 99986 899999999999997653 47899988776 456777777764
No 45
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.43 E-value=7.9e-13 Score=137.80 Aligned_cols=111 Identities=18% Similarity=0.195 Sum_probs=88.7
Q ss_pred CeEEEEEEEEeecCCC-CCCCCCeEEEEEECCCCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEcCcC
Q 035970 5 PRVLEISIVSGHDLAL-VSKSMKTYSVAWVDPERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAAAWL 83 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~-~~g~~DPYVvV~L~p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~d~~ 83 (377)
.+.|.|+|++|++|+. ..+.+||||+|++++ ++.+|+|+++ +.||+|||+|.|.+.... ....|.|+|||+|.+
T Consensus 393 ~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~-~~~kTkvik~-tlNP~Wne~f~f~~~~~~---~~~~L~~~V~D~D~~ 467 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWGDYTTATDAYLKVFFGG-QEFRTGVVWN-NNNPRWTDKMDFENVLLS---TGGPLRVQVWDADYG 467 (540)
T ss_dssp EEEEEEEEEEEESCCCSSCSCCCEEEEEEETT-EEEECCCBCS-CSSCBCCCCEEEEEEETT---TCCCEEEEEEECCSS
T ss_pred ccEEEEEEEEccCCCcccCCCcCeEEEEEECC-EeeeeeeecC-CCCCCCCeEEEEEEecCC---CCCEEEEEEEECCCC
Confidence 5789999999999974 457899999999985 5799999876 799999999999864311 357899999999976
Q ss_pred -CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceEEEEEEEEEec
Q 035970 84 -KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGILNLGITLLDN 137 (377)
Q Consensus 84 -~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~L~LsV~f~p~ 137 (377)
.|+|||++.++|.. + . ...|++| .+|.|++++.+.-.
T Consensus 468 ~~dD~LG~~~~~L~~---g-~-------~~~~~~l------~~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 468 WDDDLLGSCDRSPHS---G-F-------HEVTCEL------NHGRVKFSYHAKCL 505 (540)
T ss_dssp SCCEEEEEEEECCCS---E-E-------EEEEEEC------SSSEEEEEEEEEEC
T ss_pred CCCCEEEEEEEEeeC---C-c-------EEEEEEc------CCeEEEEEEEEEEC
Confidence 67999999999872 1 1 1356654 36899998887654
No 46
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.41 E-value=5.3e-13 Score=143.76 Aligned_cols=104 Identities=17% Similarity=0.295 Sum_probs=87.5
Q ss_pred CCCeEEEEEEEEeecCCC---C--CCCCCeEEEEEECC--CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEE
Q 035970 3 PPPRVLEISIVSGHDLAL---V--SKSMKTYSVAWVDP--ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMI 75 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~---~--~g~~DPYVvV~L~p--~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~V 75 (377)
.+.+.|+|+|++|++|+. . .+.+||||+|++.+ ..+++|+|+++ +.||+|||+|.|.+... ....|.|
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~-tlNPvWNEtF~F~v~~~----~~~~L~~ 89 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPN----QENVLEI 89 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTT----SCCBCEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcC-CCCCeeeeEEEEEecCC----CCCEEEE
Confidence 357899999999999986 2 47899999999985 46789999875 79999999999999864 3468999
Q ss_pred EEEEcCcCCCceeEEEEEEcccccCCcccCCCCCceeEEEEee
Q 035970 76 EIYAAAWLKDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVR 118 (377)
Q Consensus 76 eVyD~d~~~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lr 118 (377)
+|||++.++|++||++.|+|.++..+.. ...|++|.
T Consensus 90 ~V~D~D~~~ddfIG~v~I~L~~L~~g~~-------~~~w~~L~ 125 (749)
T 1cjy_A 90 TLMDANYVMDETLGTATFTVSSMKVGEK-------KEVPFIFN 125 (749)
T ss_dssp EEEECCSSSCEEEEEECCBSTTSCTTCC-------CCEEEEET
T ss_pred EEEECCCCCCceeEEEEEEHHHcCCCCc-------eEEEEecC
Confidence 9999997669999999999999866543 23688875
No 47
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.38 E-value=3.9e-14 Score=145.16 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=19.8
Q ss_pred CeEEEEEEEEeecCCCCCCCCCeEEEEEECCCCeEEeEeeCCCC---CCCeeeeEEEEEeccCCCCCCCceEEEEEEEc-
Q 035970 5 PRVLEISIVSGHDLALVSKSMKTYSVAWVDPERKLTTRVDQNGL---NNPSWNEKFVFRVDDRFLTDETSAIMIEIYAA- 80 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~~~g~~DPYVvV~L~p~~k~rTrV~k~gg---~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~- 80 (377)
.+.|+|+|++|++|+... ||||++++++....+|++.++ + .||+|||+|.|.+.+. ...|.|+|||+
T Consensus 10 ~~~L~V~VieAk~L~~~d---dpYv~v~l~~~~~~kT~v~~k-t~~glnP~WnE~F~f~~~~~-----~~~L~v~V~d~~ 80 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK---RYYCELCLDDMLYARTTSKPR-SASGDTVFWGEHFEFNNLPA-----VRALRLHLYRDS 80 (483)
T ss_dssp EECC-------------------------------------------------CCEECC---------------------
T ss_pred ccEEEEEEEEcCCcCCCC---CCeEEEEECCeEEeeeeEEeC-CCCCCCCccccEEEEecCCC-----ccEEEEEEEecC
Confidence 357999999999997543 999999998655678998765 5 8999999999997542 37899999995
Q ss_pred C----cCCCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCC------------------------CcceEEEEEE
Q 035970 81 A----WLKDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSG------------------------RPQGILNLGI 132 (377)
Q Consensus 81 d----~~~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sG------------------------k~~G~L~LsV 132 (377)
+ ..+|++||.+.|++.++..+.. ...||+|..+.+ ...|.|+|.+
T Consensus 81 d~~~~~~~d~~lG~v~i~l~~l~~~~~-------~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v 153 (483)
T 3bxj_A 81 DKKRKKDKAGYVGLVTVPVATLAGRHF-------TEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKA 153 (483)
T ss_dssp --------------------------C-------CEECC--------------------------------------CEE
T ss_pred CccccCCCCceEEEEEEEHHHhcCCCC-------CCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEE
Confidence 4 3579999999999999876432 247888864321 3579999999
Q ss_pred EEEecC
Q 035970 133 TLLDNT 138 (377)
Q Consensus 133 ~f~p~s 138 (377)
+|.+..
T Consensus 154 ~~~~~~ 159 (483)
T 3bxj_A 154 RYQTMS 159 (483)
T ss_dssp EEEECC
T ss_pred Eeeeee
Confidence 998875
No 48
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.30 E-value=9.1e-13 Score=125.55 Aligned_cols=94 Identities=23% Similarity=0.339 Sum_probs=77.6
Q ss_pred CCCeEEEEEEEEeecCCCC--CCCCCeEEEEEECC----CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEE
Q 035970 3 PPPRVLEISIVSGHDLALV--SKSMKTYSVAWVDP----ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIE 76 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~--~g~~DPYVvV~L~p----~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~Ve 76 (377)
+..+.|+|+|++|++|+.. .+.+||||++++.+ ..+++|++.++ +.||+|||+|.|.+....+ ....|.|+
T Consensus 149 ~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~L~i~ 225 (296)
T 1dqv_A 149 PTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTYNEALVFDVAPESV--ENVGLSIA 225 (296)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEEEECCCCCCCSGGG--GSCCCCCE
T ss_pred cccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeECceEEEEcCHHHc--cCcEEEEE
Confidence 3467899999999999753 57889999999963 25788998875 7999999999999876533 24579999
Q ss_pred EEEcCcC-CCceeEEEEEEccccc
Q 035970 77 IYAAAWL-KDALIGSVRVLISHLF 99 (377)
Q Consensus 77 VyD~d~~-~DdlIG~a~IpLs~L~ 99 (377)
|||++.+ .|++||.+.|++..+.
T Consensus 226 V~d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 226 VVDYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp EEECCSSSCCEEEEECCCSSCTTC
T ss_pred EEeCCCCCCCceEEEEEECCccCC
Confidence 9999976 6899999999998764
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.13 E-value=1.2e-10 Score=123.17 Aligned_cols=104 Identities=21% Similarity=0.280 Sum_probs=84.7
Q ss_pred CeEEEEEEEEeecCCC--CCCCCCeEEEEEECC----CCeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEE
Q 035970 5 PRVLEISIVSGHDLAL--VSKSMKTYSVAWVDP----ERKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIY 78 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~--~~g~~DPYVvV~L~p----~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVy 78 (377)
.+.|.|+|++|++|.. .++.+||||++++.+ ..+.+|+++++ +.||.|||+|.|.+.... ....|.|+||
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~-tlnP~wne~f~f~~~~~~---~~~~L~v~v~ 246 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKS-SLNPEWNETFRFQLKESD---KDRRLSVEIW 246 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSS-CSSCEEEEEEEEECCSTT---TTCEEEEEEE
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCcccccccccccccc-ccCCCccceeeeecccCC---ccceeeeEEe
Confidence 4679999999999964 468999999999943 25789999876 799999999999987643 3457999999
Q ss_pred EcCcC-CCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCC
Q 035970 79 AAAWL-KDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRP 120 (377)
Q Consensus 79 D~d~~-~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~ 120 (377)
|++.+ .|++||.+.++|.++..... ..|+.|..+
T Consensus 247 d~d~~~~dd~iG~~~i~l~~l~~~~~--------~~w~~Lls~ 281 (674)
T 3pfq_A 247 DWDLTSRNDFMGSLSFGISELQKAGV--------DGWFKLLSQ 281 (674)
T ss_dssp ECCSSSCCEECCBCCCBTTHHHHCCE--------EEEEECBCT
T ss_pred ecccccccccccccccchhhhccCCc--------ccceeeccc
Confidence 99965 69999999999999876432 468877753
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.72 E-value=2.2e-07 Score=79.92 Aligned_cols=115 Identities=17% Similarity=0.195 Sum_probs=84.5
Q ss_pred CeEEEEEEEEeec--CCCCCCCCCeEEEEEECCCC---eEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEE
Q 035970 5 PRVLEISIVSGHD--LALVSKSMKTYSVAWVDPER---KLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYA 79 (377)
Q Consensus 5 ~g~LeVtVISAkd--L~~~~g~~DPYVvV~L~p~~---k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD 79 (377)
...|+|.+.++.. |.......||||.|.++-.. ..+|-+.+..+..|+|||.|.-.|.+ ...|.|.|++
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~------Gr~l~i~Vfh 78 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE------GRVIQIVLMR 78 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT------TCEEEEEEEE
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC------CEEEEEEEEc
Confidence 4679999988764 33333468999999997321 12443445558999999999999985 5899999997
Q ss_pred cCcCCCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceEEEEEEEEE
Q 035970 80 AAWLKDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGILNLGITLL 135 (377)
Q Consensus 80 ~d~~~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~L~LsV~f~ 135 (377)
... +||..++|++.+|...-.. .......|+.|. |+|.|++.+.+.
T Consensus 79 ~a~---~fvAn~tV~~edL~~~c~~--~~g~~e~WvdLe-----P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 79 AAE---EPVSEVTVGVSVLAERCKK--NNGKAEFWLDLQ-----PQAKVLMSVQYF 124 (126)
T ss_dssp ETT---EEEEEEEEEHHHHHHHHHT--TTTEEEEEEECB-----SSCEEEEEEEEE
T ss_pred CCC---CeeeEEEEEHHHHHhhhcc--CCCceEEEEecc-----cCcEEEEEEEEe
Confidence 655 8999999999999854210 012346898775 799999998875
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.60 E-value=2.6e-07 Score=80.52 Aligned_cols=115 Identities=14% Similarity=0.208 Sum_probs=83.1
Q ss_pred CeEEEEEEEEeecCCC---CCCCCCeEEEEEECCCC---eEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEE
Q 035970 5 PRVLEISIVSGHDLAL---VSKSMKTYSVAWVDPER---KLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIY 78 (377)
Q Consensus 5 ~g~LeVtVISAkdL~~---~~g~~DPYVvV~L~p~~---k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVy 78 (377)
...|+|.+.++....- .....||||.|.++-.. ..+|=+.+..+..|+|||.|.-.|.+ ...|.|.|+
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~------Gr~l~i~Vf 82 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK------GRVMQIIVK 82 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS------SCEEEEEEE
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC------CeEEEEEEE
Confidence 4679999988875432 23468999999987321 13341222237899999999998885 589999999
Q ss_pred EcCcCCCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCCCcceEEEEEEEEE
Q 035970 79 AAAWLKDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSGRPQGILNLGITLL 135 (377)
Q Consensus 79 D~d~~~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sGk~~G~L~LsV~f~ 135 (377)
+... +||..++|++.+|...-.. .......|+.|. |+|.|++.+.|.
T Consensus 83 h~a~---~fVAn~tV~~edL~~~ck~--~~g~~e~WvdLe-----P~Gkl~v~i~~~ 129 (138)
T 2enj_A 83 GKNV---DLISETTVELYSLAERCRK--NNGKTEIWLELK-----PQGRMLMNARYF 129 (138)
T ss_dssp CSSC---SCCEEEEEESHHHHHHHHH--TTTCEEEEEECB-----SSCEEEEEEEEC
T ss_pred cCCC---CeeeEEEEEHHHHHhhhcc--CCCceEEEEecc-----cCcEEEEEEEEE
Confidence 6554 8999999999999854110 012246899875 799999999985
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=95.01 E-value=0.22 Score=44.09 Aligned_cols=128 Identities=15% Similarity=0.058 Sum_probs=87.4
Q ss_pred CCCeEEEEEEEEeecCCCC---CCCCCeEEEEEEC--CCCeEEeEeeCCCCCCCeeeeEEEEEeccCC--CC-CCCceEE
Q 035970 3 PPPRVLEISIVSGHDLALV---SKSMKTYSVAWVD--PERKLTTRVDQNGLNNPSWNEKFVFRVDDRF--LT-DETSAIM 74 (377)
Q Consensus 3 ~p~g~LeVtVISAkdL~~~---~g~~DPYVvV~L~--p~~k~rTrV~k~gg~NP~WNEtF~F~V~~~~--L~-~~~s~L~ 74 (377)
+..+.++|.|.+|.--+.. .+..+|+.-+..+ .-..+.|.+.. +.+|.+|.+-+|.|.... ++ .....|.
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~--G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR--GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE--SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc--CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 3467899999988621111 1345665555543 33567888876 589999999888875432 10 1234788
Q ss_pred EEEEEcCcCCCceeEEEEEEcccccCCcccCCCCCceeEEEEeeCCCC--CcceEEEEEEEEEecC
Q 035970 75 IEIYAAAWLKDALIGSVRVLISHLFGTLTHNSSSSTRYVALQVRRPSG--RPQGILNLGITLLDNT 138 (377)
Q Consensus 75 VeVyD~d~~~DdlIG~a~IpLs~L~~~~~~~~~~~~~~v~y~Lrr~sG--k~~G~L~LsV~f~p~s 138 (377)
|+++...-..-+.||.+.|+|..++.... . .+-..+|....| ..-|.|.+.|++..+-
T Consensus 93 lELhqa~g~~~~tla~~~I~l~~lLe~~~-----~-i~g~~~L~g~~g~~~~~G~LeywiRL~~Pi 152 (156)
T 2yrb_A 93 LEVHQAYSTEYETIAACQLKFHEILEKSG-----R-IFCTASLIGTKGDIPNFGTVEYWFRLRVSG 152 (156)
T ss_dssp EEEEEECSSCEEEEEEEEECCSHHHHCCS-----C-EEEEEEECBSSSCCTTSEEEEEEEEEEECC
T ss_pred EEEEEeeCCCceEEEEEEEEhHHhhCcCC-----c-eEEEEEEEcCCCCcceEEEEEEEEEEeccc
Confidence 99987643344699999999999986532 1 234557777777 6799999999997663
No 53
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=87.57 E-value=2.9 Score=46.33 Aligned_cols=90 Identities=16% Similarity=0.276 Sum_probs=58.3
Q ss_pred eEEEEEEEEeecCCCCCCCCCeEEEEEE--CCC---CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEc
Q 035970 6 RVLEISIVSGHDLALVSKSMKTYSVAWV--DPE---RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAA 80 (377)
Q Consensus 6 g~LeVtVISAkdL~~~~g~~DPYVvV~L--~p~---~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~ 80 (377)
..+.|+|+++.++... ...+-||.+.| +.. ....|.... ...+|.|||.+.|++.-..|- -.+.|.|.||+.
T Consensus 217 ~~f~i~i~~~~~~~~~-~~~~~~V~~~l~~g~~~l~~~~~T~~~~-~~~~~~Wne~l~f~i~i~dLP-r~a~L~~ti~~~ 293 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD-ERMKLVVQAGLFHGNEMLCKTVSSSEVN-VCSEPVWKQRLEFDISVCDLP-RMARLCFALYAV 293 (940)
T ss_dssp SEEEEEEEEEECCCC----CEEEEEEEEEETTEESSCCEECCCEE-SCSSCEEEEEEEEEEEGGGCC-TTCEEEEEEEEE
T ss_pred CceEEEEEEecccCCC-CCceEEEEEEEEECCEEccCceeccccc-CCCCcccceEEEcccccccCC-cccEEEEEEEEe
Confidence 5689999999998532 45678888766 321 123343222 246899999999987654431 257899999995
Q ss_pred CcC-------------CCceeEEEEEEcccc
Q 035970 81 AWL-------------KDALIGSVRVLISHL 98 (377)
Q Consensus 81 d~~-------------~DdlIG~a~IpLs~L 98 (377)
... .+..||.+.++|=+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 294 VEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp C----------------CEEEEEEEEESBCT
T ss_pred cCCccCccccccccccccceEEEEeeeEECC
Confidence 321 145899998887664
No 54
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=87.12 E-value=1.7 Score=40.34 Aligned_cols=58 Identities=9% Similarity=0.131 Sum_probs=41.0
Q ss_pred CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEcCcC-----CCceeEEEEEEccc
Q 035970 37 RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAAAWL-----KDALIGSVRVLISH 97 (377)
Q Consensus 37 ~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~d~~-----~DdlIG~a~IpLs~ 97 (377)
..++|-|... +.+|.|+|++.+.++.... ....|.|++++...- .+..+|.+.+||-.
T Consensus 77 se~~S~V~YH-nk~P~w~EtIKi~LP~~~~--~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQ-VKQPRWFETVKVAIPIEDV--NRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTT-CSSCCCCEEEEEEECTTSS--TTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEc-CCCCCceEeEEEeeChhhc--CCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 3566777655 6899999999999987643 568899999875421 23467777776643
No 55
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=84.86 E-value=3.6 Score=46.29 Aligned_cols=91 Identities=15% Similarity=0.170 Sum_probs=60.3
Q ss_pred eEEEEEEEEeecCCCC-CCCCCeEEEEEE--CCC---CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEE
Q 035970 6 RVLEISIVSGHDLALV-SKSMKTYSVAWV--DPE---RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYA 79 (377)
Q Consensus 6 g~LeVtVISAkdL~~~-~g~~DPYVvV~L--~p~---~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD 79 (377)
..+.|+|+++.++.-. ....+.||.+.| +.. ....|+.. ...+|.|||.+.|++.-..|- ..+.|.|.||+
T Consensus 355 ~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~--~~~~~~Wne~l~f~i~i~dLP-r~arL~~tl~~ 431 (1091)
T 3hhm_A 355 SALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRV--PCSNPRWNEWLNYDIYIPDLP-RAARLCLSICS 431 (1091)
T ss_dssp SEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCC--CTTSCEEEEEEEEEEEGGGCC-TTCEEEEEECC
T ss_pred CCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceecccc--CCCCCCCCeeEEecCccccCC-hhcEEEEEEEE
Confidence 4689999999888532 235678999877 322 22334422 246888999999987644331 25789999998
Q ss_pred cCcC-----CCceeEEEEEEccccc
Q 035970 80 AAWL-----KDALIGSVRVLISHLF 99 (377)
Q Consensus 80 ~d~~-----~DdlIG~a~IpLs~L~ 99 (377)
.... ....||.+.++|=+..
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 6532 2358999999887643
No 56
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=74.83 E-value=11 Score=32.98 Aligned_cols=94 Identities=14% Similarity=0.036 Sum_probs=61.2
Q ss_pred eEEEEEEEEeecCCCCCCCCCeEEEEEE-CCC-----CeEEeEee-CCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEE
Q 035970 6 RVLEISIVSGHDLALVSKSMKTYSVAWV-DPE-----RKLTTRVD-QNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIY 78 (377)
Q Consensus 6 g~LeVtVISAkdL~~~~g~~DPYVvV~L-~p~-----~k~rTrV~-k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVy 78 (377)
..|.|.|-+- +|++...-.|||+.|++ |.+ ..+.|.+. ...+..=.||.++.++..-..|. .+..|.||+.
T Consensus 14 t~l~v~Ie~i-glkda~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp-~G~aivfElk 91 (152)
T 2qzq_A 14 TLLTLTIEKI-GLKDAGQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLP-KGAAIFFEFK 91 (152)
T ss_dssp CEEEEEEEEE-ECTTGGGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSC-TTCEEEEEEE
T ss_pred eEEEEEEEEE-EeCCHHHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCC-CCcEEEEEEE
Confidence 4566666655 88877667899999998 321 34567654 11233456777777665444442 4678999999
Q ss_pred EcCcCCC--ceeEEEEEEcccccCC
Q 035970 79 AAAWLKD--ALIGSVRVLISHLFGT 101 (377)
Q Consensus 79 D~d~~~D--dlIG~a~IpLs~L~~~ 101 (377)
++..... .....+.+.++++.++
T Consensus 92 H~k~kkkk~S~kCw~f~~~d~i~~g 116 (152)
T 2qzq_A 92 HYKPKKRFTSTKCFAFMEMDEIKPG 116 (152)
T ss_dssp EEETTTTEEEEEEEEEEEGGGCCSE
T ss_pred EecccceeeeeeeEEEEEhhhcccC
Confidence 8765433 3677788888877553
No 57
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=71.94 E-value=23 Score=39.34 Aligned_cols=91 Identities=16% Similarity=0.163 Sum_probs=55.0
Q ss_pred eEEEEEEEEeecCC-CCCCCCCeEEEEEE-CCCC---eEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEc
Q 035970 6 RVLEISIVSGHDLA-LVSKSMKTYSVAWV-DPER---KLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAA 80 (377)
Q Consensus 6 g~LeVtVISAkdL~-~~~g~~DPYVvV~L-~p~~---k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~ 80 (377)
..+.|.|+.+.... +.....+.||.+.| ++.. ...|.-.. -..+|.|||.+.|++.-..|- -.+.|.|.||+.
T Consensus 218 ~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~-~~~~~~Wne~l~f~i~i~dLP-r~a~L~~ti~~~ 295 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKP-FTEEVLWNVWLEFSIKIKDLP-KGALLNLQIYCG 295 (961)
T ss_dssp SEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEE-CCSEEEEEEEEEEEEEGGGCC-TTCEEEEEEEEE
T ss_pred CceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccc-cCCCcccceeEEeccccccCC-cccEEEEEEEec
Confidence 45788898886421 12235678888765 2222 12232111 246799999999986644331 257899999975
Q ss_pred CcC-----------------CCceeEEEEEEcccc
Q 035970 81 AWL-----------------KDALIGSVRVLISHL 98 (377)
Q Consensus 81 d~~-----------------~DdlIG~a~IpLs~L 98 (377)
... ....||.+.++|=+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EC--------------------CEEEEEEEESBCT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecC
Confidence 311 234788888887664
No 58
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=55.69 E-value=9.3 Score=43.03 Aligned_cols=72 Identities=22% Similarity=0.386 Sum_probs=47.1
Q ss_pred eEEEEEEEEeecCCCCCCCCCeEEEEEE--CCC---CeEEeEeeCCCCCCCeeeeEEEEEeccCCCCCCCceEEEEEEEc
Q 035970 6 RVLEISIVSGHDLALVSKSMKTYSVAWV--DPE---RKLTTRVDQNGLNNPSWNEKFVFRVDDRFLTDETSAIMIEIYAA 80 (377)
Q Consensus 6 g~LeVtVISAkdL~~~~g~~DPYVvV~L--~p~---~k~rTrV~k~gg~NP~WNEtF~F~V~~~~L~~~~s~L~VeVyD~ 80 (377)
..+.|+|+++.++... ...+-||.+.+ +.. ....|... ....+|.|||.+.|++.-..|- -.+.|.|.||+.
T Consensus 353 ~~f~i~i~~~~~~~~~-~~~~~~V~~~l~~g~~~L~~~~~T~~~-~~~~~~~Wnewl~f~i~~~dLP-r~a~L~~ti~~~ 429 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE-ETVKVHVRAGLFHGTELLCKTVVSSEI-SGKNDHIWNEQLEFDINICDLP-RMARLCFAVYAV 429 (1092)
T ss_dssp SEEEEEECCCCCCCCC-SSCCCCCBCCEEETTEESSCCCBCCCC-CSSSCCCCCEEEEEEEESSSCC-TTCEEEEECCCC
T ss_pred CCEEEEEEEeccCCCC-CCceEEEEEEEEECCEEccCceecccc-cCCCCCccceeEEeCCccccCC-hhcEEEEEEEEe
Confidence 4688999999888532 35677777654 321 11223322 2256899999999987655442 357899999985
Done!