Query 035971
Match_columns 614
No_of_seqs 387 out of 2967
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 13:36:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035971.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035971hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sdma_ c.37.1.9 (A:) Kinesin 100.0 1.3E-74 9.8E-79 616.1 23.5 313 15-337 1-331 (364)
2 d1v8ka_ c.37.1.9 (A:) Kinesin 100.0 4.8E-72 3.5E-76 595.9 30.9 309 13-328 29-361 (362)
3 d1goja_ c.37.1.9 (A:) Kinesin 100.0 2.3E-72 1.7E-76 596.5 27.9 316 12-337 3-338 (354)
4 d1x88a1 c.37.1.9 (A:18-362) Ki 100.0 1.3E-72 9.6E-77 596.4 20.8 312 15-331 1-345 (345)
5 d2zfia1 c.37.1.9 (A:4-352) Kin 100.0 3.8E-71 2.7E-75 586.2 25.6 305 14-324 1-348 (349)
6 d1bg2a_ c.37.1.9 (A:) Kinesin 100.0 1.9E-71 1.4E-75 582.6 22.1 301 14-328 5-323 (323)
7 d1ry6a_ c.37.1.9 (A:) Kinesin 100.0 3.7E-71 2.7E-75 582.1 24.3 303 16-324 2-328 (330)
8 d2ncda_ c.37.1.9 (A:) Kinesin 100.0 1.7E-70 1.3E-74 585.1 27.7 310 6-324 37-365 (368)
9 d1f9va_ c.37.1.9 (A:) Kinesin 100.0 2.6E-70 1.9E-74 578.3 27.7 312 14-330 1-341 (342)
10 d2edua1 a.60.2.7 (A:8-98) KIF2 99.4 4.5E-14 3.3E-18 119.4 7.0 67 544-611 19-86 (91)
11 d3bzka1 a.60.2.6 (A:474-563) T 99.3 1.5E-12 1.1E-16 109.8 5.5 60 544-604 21-81 (90)
12 d2duya1 a.60.2.7 (A:11-75) Unc 99.1 2.3E-11 1.7E-15 96.3 5.0 50 550-604 9-59 (65)
13 d2axtu1 a.60.12.2 (U:37-134) P 98.9 1.4E-10 1E-14 98.4 3.5 52 550-606 19-71 (98)
14 d2i5ha1 e.71.1.1 (A:16-195) Hy 97.8 1.6E-05 1.2E-09 73.4 7.4 61 547-609 99-168 (180)
15 d2i1qa1 a.60.4.1 (A:5-64) DNA 96.7 0.00099 7.2E-08 50.6 5.0 46 560-607 1-51 (60)
16 d1kfta_ a.60.2.3 (A:) Excinucl 96.2 0.00046 3.3E-08 51.8 0.5 46 560-606 4-52 (56)
17 d1pzna1 a.60.4.1 (A:35-95) DNA 96.1 0.0019 1.4E-07 49.1 3.7 48 559-608 2-54 (61)
18 d1kfta_ a.60.2.3 (A:) Excinucl 96.0 0.0014 1E-07 49.0 2.4 39 539-577 13-53 (56)
19 d1x2ia1 a.60.2.5 (A:2-69) ATP- 95.9 0.001 7.3E-08 51.8 1.4 48 559-606 11-60 (68)
20 d2bgwa1 a.60.2.5 (A:160-229) D 95.8 0.0023 1.7E-07 49.9 2.8 47 560-606 15-63 (70)
21 d1bvsa2 a.60.2.1 (A:64-134) DN 95.2 0.0073 5.3E-07 47.2 3.9 32 545-576 31-62 (71)
22 d1x2ia1 a.60.2.5 (A:2-69) ATP- 95.0 0.0063 4.6E-07 47.1 3.2 40 541-580 23-64 (68)
23 d2bcqa2 a.60.12.1 (A:329-385) 94.8 0.017 1.3E-06 43.1 4.9 39 558-602 8-47 (57)
24 d2fmpa2 a.60.12.1 (A:92-148) D 94.7 0.011 7.8E-07 44.2 3.6 40 556-601 5-46 (57)
25 d2bgwa1 a.60.2.5 (A:160-229) D 94.6 0.013 9.3E-07 45.4 4.0 32 549-580 36-67 (70)
26 d1bvsa2 a.60.2.1 (A:64-134) DN 94.5 0.034 2.5E-06 43.3 6.1 48 558-607 9-63 (71)
27 d1ixra1 a.60.2.1 (A:63-135) DN 94.3 0.015 1.1E-06 45.5 3.8 32 545-576 32-63 (73)
28 d1jmsa3 a.60.12.1 (A:243-302) 94.1 0.022 1.6E-06 42.9 4.3 39 557-601 7-48 (60)
29 d1cuka2 a.60.2.1 (A:65-142) DN 93.5 0.025 1.8E-06 44.9 3.6 35 546-580 32-67 (78)
30 d1l8qa2 c.37.1.20 (A:77-289) C 93.2 0.017 1.2E-06 54.1 2.6 49 63-114 6-54 (213)
31 d1cuka2 a.60.2.1 (A:65-142) DN 93.1 0.045 3.3E-06 43.3 4.5 49 558-608 9-64 (78)
32 d2a1ja1 a.60.2.5 (A:837-898) D 92.9 0.058 4.2E-06 40.5 4.7 39 558-604 3-50 (62)
33 d1ixra1 a.60.2.1 (A:63-135) DN 92.8 0.059 4.3E-06 42.1 4.8 48 558-607 10-64 (73)
34 d2a1jb1 a.60.2.5 (B:219-296) D 92.0 0.036 2.6E-06 43.7 2.6 25 554-578 47-71 (78)
35 d2i1qa1 a.60.4.1 (A:5-64) DNA 91.8 0.054 3.9E-06 40.6 3.3 27 551-577 25-51 (60)
36 d2fmpa1 a.60.6.1 (A:10-91) DNA 91.0 0.06 4.4E-06 42.8 3.0 37 555-593 45-81 (82)
37 d1jmsa1 a.60.6.1 (A:148-242) T 90.9 0.063 4.6E-06 44.0 3.1 37 555-593 59-95 (95)
38 d1pzna1 a.60.4.1 (A:35-95) DNA 90.5 0.049 3.5E-06 40.9 1.9 28 550-577 26-53 (61)
39 d1dgsa1 a.60.2.2 (A:401-581) N 90.2 0.08 5.8E-06 48.4 3.5 48 550-598 131-178 (181)
40 d1szpa1 a.60.4.1 (A:81-144) DN 89.6 0.079 5.7E-06 40.2 2.4 27 552-578 30-56 (64)
41 d1r7ra3 c.37.1.20 (A:471-735) 89.3 0.066 4.8E-06 51.5 2.2 51 63-113 3-58 (265)
42 d2bcqa1 a.60.6.1 (A:252-327) D 88.8 0.13 9.5E-06 40.0 3.3 31 556-588 44-74 (76)
43 d2a1jb1 a.60.2.5 (B:219-296) D 88.4 0.12 8.7E-06 40.5 2.8 48 558-606 19-69 (78)
44 d1keaa_ a.96.1.2 (A:) Thymine- 87.9 0.12 8.6E-06 48.4 2.9 26 554-579 109-134 (217)
45 d1w5sa2 c.37.1.20 (A:7-293) CD 87.3 0.24 1.8E-05 45.9 4.8 57 80-146 25-86 (287)
46 d1orna_ a.96.1.1 (A:) Endonucl 86.6 0.16 1.2E-05 47.3 3.1 28 554-581 106-133 (214)
47 d1gvnb_ c.37.1.21 (B:) Plasmid 85.9 0.14 1E-05 47.7 2.3 30 83-112 14-48 (273)
48 d1kg2a_ a.96.1.2 (A:) Catalyti 85.8 0.18 1.3E-05 47.3 2.9 28 554-581 105-132 (224)
49 d1rrqa1 a.96.1.2 (A:9-229) Cat 85.7 0.19 1.4E-05 47.0 3.0 28 554-581 103-130 (221)
50 d2abka_ a.96.1.1 (A:) Endonucl 85.1 0.19 1.4E-05 46.7 2.7 30 554-583 105-134 (211)
51 d1d2na_ c.37.1.20 (A:) Hexamer 83.3 0.19 1.4E-05 47.6 1.8 49 64-113 6-57 (246)
52 d1b22a_ a.60.4.1 (A:) DNA repa 83.3 0.25 1.8E-05 38.0 2.2 27 552-578 37-63 (70)
53 d1fnna2 c.37.1.20 (A:1-276) CD 82.4 0.29 2.1E-05 45.1 2.7 30 84-113 28-60 (276)
54 d1p9ra_ c.37.1.11 (A:) Extrace 82.2 0.21 1.5E-05 50.8 1.8 30 85-114 147-176 (401)
55 d1wg8a1 a.60.13.1 (A:109-206) 82.2 0.12 8.5E-06 42.6 -0.2 44 548-593 22-71 (98)
56 d2a1ja1 a.60.2.5 (A:837-898) D 82.2 0.25 1.8E-05 36.9 1.7 30 549-579 26-55 (62)
57 d1lv7a_ c.37.1.20 (A:) AAA dom 78.1 0.17 1.2E-05 48.4 -0.6 45 64-113 9-62 (256)
58 d1iqpa2 c.37.1.20 (A:2-232) Re 77.0 0.41 3E-05 43.8 1.8 23 91-113 40-62 (231)
59 d2p6ra2 a.289.1.2 (A:489-686) 76.0 0.48 3.5E-05 43.6 2.0 33 556-594 142-174 (198)
60 d1e32a2 c.37.1.20 (A:201-458) 75.7 0.43 3.1E-05 45.2 1.6 49 65-113 2-55 (258)
61 d1ixza_ c.37.1.20 (A:) AAA dom 75.0 0.44 3.2E-05 45.1 1.4 49 64-113 6-59 (247)
62 d1pu6a_ a.96.1.5 (A:) 3-Methyl 74.1 0.77 5.6E-05 42.6 2.9 25 554-578 116-140 (217)
63 d1szpa2 c.37.1.11 (A:145-395) 73.3 0.68 4.9E-05 41.7 2.3 29 84-112 19-50 (251)
64 d1szpa1 a.60.4.1 (A:81-144) DN 72.4 1.3 9.1E-05 33.2 3.2 45 557-608 3-56 (64)
65 d1sxja2 c.37.1.20 (A:295-547) 71.7 0.59 4.3E-05 43.0 1.4 20 94-113 50-69 (253)
66 d1okkd2 c.37.1.10 (D:97-303) G 71.3 0.43 3.1E-05 44.2 0.3 20 94-113 4-23 (207)
67 d1a77a1 a.60.7.1 (A:209-316) F 71.1 1.8 0.00013 35.4 4.3 36 561-603 20-55 (108)
68 d1sxjd2 c.37.1.20 (D:26-262) R 71.1 0.59 4.3E-05 42.5 1.3 21 93-113 30-50 (237)
69 d1qdea_ c.37.1.19 (A:) Initiat 69.8 0.83 6.1E-05 41.8 2.0 25 87-113 40-64 (212)
70 d1vdda_ e.49.1.1 (A:) Recombin 68.9 1.2 8.5E-05 40.9 2.8 23 558-580 12-34 (199)
71 d2i3ba1 c.37.1.11 (A:1-189) Ca 68.4 0.69 5E-05 39.4 1.0 16 98-113 3-18 (189)
72 d2noha1 a.96.1.3 (A:136-325) 8 67.5 1.4 0.0001 39.7 3.0 23 557-579 102-124 (190)
73 d1ly1a_ c.37.1.1 (A:) Polynucl 67.5 0.76 5.5E-05 38.6 1.1 15 98-112 4-18 (152)
74 d2p6ra3 c.37.1.19 (A:1-202) He 67.5 0.51 3.7E-05 42.4 -0.1 23 88-112 34-56 (202)
75 d1in4a2 c.37.1.20 (A:17-254) H 67.1 1.2 9E-05 40.5 2.6 43 65-112 7-51 (238)
76 d1s2ma1 c.37.1.19 (A:46-251) P 66.3 1.2 8.7E-05 40.2 2.3 25 87-113 31-55 (206)
77 d1gkub1 c.37.1.16 (B:1-250) He 66.2 1 7.4E-05 41.4 1.8 24 87-112 51-74 (237)
78 d1ixsb2 c.37.1.20 (B:4-242) Ho 65.7 1.3 9.8E-05 40.3 2.6 44 65-113 7-52 (239)
79 d1sxjc2 c.37.1.20 (C:12-238) R 65.7 1.1 7.9E-05 40.6 1.9 20 93-112 32-51 (227)
80 d2fnaa2 c.37.1.20 (A:1-283) Ar 65.2 0.93 6.8E-05 41.4 1.3 26 88-113 21-46 (283)
81 d1j8yf2 c.37.1.10 (F:87-297) G 65.0 0.87 6.4E-05 42.1 1.0 17 97-113 13-29 (211)
82 d1yksa1 c.37.1.14 (A:185-324) 64.5 0.74 5.4E-05 37.6 0.4 16 98-113 9-24 (140)
83 d1ngna_ a.96.1.2 (A:) Mismatch 64.2 1.2 8.5E-05 38.6 1.7 22 556-577 91-112 (144)
84 d1sxjb2 c.37.1.20 (B:7-230) Re 64.0 1.2 8.5E-05 40.4 1.8 23 91-113 31-53 (224)
85 d1uaaa1 c.37.1.19 (A:2-307) DE 62.7 0.89 6.5E-05 42.7 0.6 17 97-113 15-31 (306)
86 d2edua1 a.60.2.7 (A:8-98) KIF2 62.5 2.3 0.00017 34.0 3.0 24 554-577 59-82 (91)
87 d2eyqa3 c.37.1.19 (A:546-778) 62.4 2 0.00015 40.1 3.2 29 83-111 63-91 (233)
88 d1pjra1 c.37.1.19 (A:1-318) DE 61.9 0.8 5.8E-05 43.6 0.1 18 96-113 24-41 (318)
89 d1q0ua_ c.37.1.19 (A:) Probabl 61.4 1.2 8.5E-05 40.0 1.2 25 87-113 31-55 (209)
90 d2qy9a2 c.37.1.10 (A:285-495) 61.2 0.88 6.4E-05 42.1 0.3 17 97-113 10-26 (211)
91 d1tf7a2 c.37.1.11 (A:256-497) 60.8 3.7 0.00027 36.9 4.7 29 84-112 11-42 (242)
92 d1gm5a3 c.37.1.19 (A:286-549) 60.3 1.5 0.00011 41.9 1.7 36 72-111 84-119 (264)
93 d2o3fa1 a.4.1.20 (A:1-83) Puta 59.8 6.1 0.00044 30.6 5.2 39 568-608 21-60 (83)
94 d1g6oa_ c.37.1.11 (A:) Hexamer 59.6 1.4 0.0001 43.1 1.5 26 86-113 157-183 (323)
95 d1vmaa2 c.37.1.10 (A:82-294) G 59.5 0.96 7E-05 41.8 0.2 17 97-113 12-28 (213)
96 d1pzna2 c.37.1.11 (A:96-349) D 59.4 2.3 0.00017 38.3 3.0 29 84-112 21-52 (254)
97 d1b43a1 a.60.7.1 (A:220-339) F 59.1 5 0.00036 33.4 4.8 39 561-606 20-60 (120)
98 d1ofha_ c.37.1.20 (A:) HslU {H 58.4 1.1 8E-05 43.4 0.4 16 97-112 50-65 (309)
99 d1t6na_ c.37.1.19 (A:) Spliceo 57.9 2.4 0.00018 38.2 2.8 25 87-113 31-55 (207)
100 d1veca_ c.37.1.19 (A:) DEAD bo 57.0 2.8 0.0002 37.8 3.0 25 87-113 33-57 (206)
101 d1ls1a2 c.37.1.10 (A:89-295) G 55.9 1.2 9E-05 40.8 0.3 17 97-113 11-27 (207)
102 d1ul1x1 a.60.7.1 (X:218-357) F 55.0 3.7 0.00027 34.7 3.3 27 560-593 18-44 (140)
103 d1dgsa1 a.60.2.2 (A:401-581) N 54.8 6.1 0.00045 35.1 4.9 43 561-606 110-157 (181)
104 d1mpga1 a.96.1.3 (A:100-282) 3 54.7 2.9 0.00021 37.3 2.6 48 557-605 107-158 (183)
105 d1keaa_ a.96.1.2 (A:) Thymine- 53.5 7.1 0.00052 35.6 5.3 56 552-607 68-132 (217)
106 d1oywa2 c.37.1.19 (A:1-206) Re 53.5 1.6 0.00012 38.8 0.7 24 88-113 34-57 (206)
107 d1doqa_ a.60.3.1 (A:) C-termin 53.5 4.7 0.00034 30.4 3.3 35 551-585 33-67 (69)
108 d2fz4a1 c.37.1.19 (A:24-229) D 53.5 2 0.00015 38.7 1.3 25 87-113 78-102 (206)
109 d1m6ya1 a.60.13.1 (A:115-215) 53.4 2.4 0.00017 34.5 1.6 40 549-593 25-71 (101)
110 d1n0wa_ c.37.1.11 (A:) DNA rep 53.2 3.1 0.00022 35.7 2.5 29 84-112 8-39 (242)
111 d2bdta1 c.37.1.25 (A:1-176) Hy 53.1 1.8 0.00013 36.3 0.9 15 98-112 4-18 (176)
112 d1gm5a2 b.40.4.9 (A:106-285) R 53.0 2.9 0.00021 36.9 2.3 30 558-593 10-39 (180)
113 d1sxje2 c.37.1.20 (E:4-255) Re 52.4 1.9 0.00014 39.2 1.1 16 98-113 35-50 (252)
114 d1x6va3 c.37.1.4 (A:34-228) Ad 52.3 1.3 9.1E-05 38.6 -0.3 19 93-111 15-34 (195)
115 d1xo1a1 a.60.7.1 (A:186-290) T 52.2 4.7 0.00034 32.8 3.3 29 558-593 19-47 (105)
116 d2j0sa1 c.37.1.19 (A:22-243) P 52.1 3.4 0.00025 37.9 2.7 25 87-113 47-71 (222)
117 d2g9na1 c.37.1.19 (A:21-238) I 51.8 3.2 0.00023 37.8 2.5 25 87-113 42-66 (218)
118 d1m8pa3 c.37.1.15 (A:391-573) 51.7 2.2 0.00016 35.9 1.3 16 97-112 7-22 (183)
119 d1wrba1 c.37.1.19 (A:164-401) 51.5 2.7 0.0002 38.8 2.0 25 87-113 51-75 (238)
120 d2axtu1 a.60.12.2 (U:37-134) P 51.5 2.8 0.00021 33.9 1.8 29 553-581 48-76 (98)
121 d1rxwa1 a.60.7.1 (A:220-324) F 50.4 3.5 0.00026 33.4 2.2 27 560-593 18-44 (105)
122 d3ci0k1 a.60.16.1 (K:204-274) 50.2 2.8 0.00021 31.9 1.5 53 550-604 3-64 (71)
123 d1g41a_ c.37.1.20 (A:) HslU {H 49.5 2.1 0.00015 43.7 0.8 16 98-113 51-66 (443)
124 d2gy9m1 a.156.1.1 (M:1-114) Ri 49.2 8.2 0.0006 31.7 4.5 41 558-605 16-56 (114)
125 d1d0xa2 c.37.1.9 (A:2-33,A:80- 48.7 3.8 0.00027 44.3 2.8 36 77-113 106-142 (712)
126 d1qhxa_ c.37.1.3 (A:) Chloramp 48.4 2.3 0.00017 35.8 0.8 15 98-112 5-19 (178)
127 d2i1qa2 c.37.1.11 (A:65-322) D 48.2 4.4 0.00032 35.8 2.8 30 84-113 19-51 (258)
128 d1kk8a2 c.37.1.9 (A:1-28,A:77- 47.7 3.7 0.00027 44.9 2.6 36 77-113 102-138 (789)
129 d2mysa2 c.37.1.9 (A:4-33,A:80- 47.6 3.9 0.00028 44.8 2.7 36 77-113 104-140 (794)
130 d1y63a_ c.37.1.1 (A:) Probable 47.2 2.5 0.00018 35.7 0.9 15 97-111 6-20 (174)
131 d2csba4 a.60.2.4 (A:465-519) T 47.0 18 0.0013 24.7 5.1 44 557-604 3-51 (55)
132 d1yj5a2 c.37.1.1 (A:351-522) 5 46.5 2.8 0.0002 36.7 1.1 17 96-112 14-30 (172)
133 d1kaga_ c.37.1.2 (A:) Shikimat 46.5 2.7 0.00019 34.6 0.9 13 99-111 5-17 (169)
134 d1wp9a1 c.37.1.19 (A:1-200) pu 46.2 3.7 0.00027 35.8 1.9 17 94-112 23-39 (200)
135 d1knqa_ c.37.1.17 (A:) Glucona 45.8 2.7 0.0002 35.4 0.9 15 98-112 8-22 (171)
136 d1d5ya1 a.4.1.8 (A:3-56) Rob t 45.8 17 0.0012 25.1 5.2 41 569-610 3-45 (54)
137 d1rkba_ c.37.1.1 (A:) Adenylat 45.4 2.8 0.0002 35.2 0.9 14 99-112 7-20 (173)
138 d1w7ja2 c.37.1.9 (A:63-792) My 44.5 4.8 0.00035 43.5 2.8 35 78-113 76-111 (730)
139 d1br2a2 c.37.1.9 (A:80-789) My 44.4 4.8 0.00035 43.4 2.8 35 78-113 73-108 (710)
140 d1ee8a1 a.156.1.2 (A:122-210) 43.9 11 0.00081 29.4 4.3 49 530-593 15-63 (89)
141 d1a1va1 c.37.1.14 (A:190-325) 43.8 4.1 0.0003 33.5 1.7 18 93-111 6-23 (136)
142 d1lkxa_ c.37.1.9 (A:) Myosin S 43.7 5 0.00036 43.1 2.8 35 78-113 68-103 (684)
143 d1e9ra_ c.37.1.11 (A:) Bacteri 42.9 2.3 0.00017 42.2 -0.2 15 99-113 53-67 (433)
144 d1b22a_ a.60.4.1 (A:) DNA repa 42.5 6.6 0.00048 29.6 2.5 41 562-608 14-63 (70)
145 d1g8pa_ c.37.1.20 (A:) ATPase 42.5 3.4 0.00024 39.7 1.0 41 63-112 3-44 (333)
146 d2duya1 a.60.2.7 (A:11-75) Unc 42.4 9.4 0.00069 28.1 3.4 37 541-577 26-62 (65)
147 d2uubm1 a.156.1.1 (M:2-126) Ri 42.2 9 0.00066 32.0 3.7 41 558-605 16-56 (125)
148 d1r2za1 a.156.1.2 (A:135-228) 41.5 14 0.001 29.1 4.6 37 563-606 35-71 (94)
149 d1ukza_ c.37.1.1 (A:) Uridylat 41.5 3.7 0.00027 35.9 1.1 15 97-111 9-23 (196)
150 d1w36d1 c.37.1.19 (D:2-360) Ex 41.4 5.8 0.00042 39.0 2.7 24 88-113 157-180 (359)
151 d1zaka1 c.37.1.1 (A:3-127,A:15 41.1 3.4 0.00024 36.1 0.7 14 99-112 6-19 (189)
152 d1wuda1 a.60.8.1 (A:530-606) H 41.1 6.5 0.00047 29.9 2.3 33 540-573 29-61 (77)
153 d1zeta2 e.8.1.7 (A:27-299) DNA 41.1 16 0.0012 34.0 5.8 42 559-608 209-250 (273)
154 d1njfa_ c.37.1.20 (A:) delta p 40.5 4.4 0.00032 37.0 1.5 17 96-112 34-50 (239)
155 d1a5ta2 c.37.1.20 (A:1-207) de 40.3 5.9 0.00043 35.4 2.4 28 86-113 13-41 (207)
156 d2e1fa1 a.60.8.1 (A:1142-1235) 40.0 6.9 0.0005 31.0 2.4 40 541-581 39-85 (94)
157 d1qf9a_ c.37.1.1 (A:) UMP/CMP 39.9 3.6 0.00026 35.9 0.7 15 97-111 7-21 (194)
158 d1tf7a1 c.37.1.11 (A:14-255) C 39.9 5.6 0.00041 34.9 2.1 27 86-112 13-42 (242)
159 d1khta_ c.37.1.1 (A:) Adenylat 39.2 4.4 0.00032 34.2 1.2 18 96-113 1-18 (190)
160 d1ye8a1 c.37.1.11 (A:1-178) Hy 39.1 3 0.00022 35.5 -0.0 15 99-113 3-17 (178)
161 d1zp6a1 c.37.1.25 (A:6-181) Hy 39.0 3.9 0.00028 34.4 0.8 15 98-112 6-20 (176)
162 d1y9qa1 a.35.1.8 (A:4-82) Prob 38.8 14 0.001 27.5 4.0 37 568-607 7-44 (79)
163 d1svma_ c.37.1.20 (A:) Papillo 38.8 6.5 0.00048 38.7 2.6 16 97-112 155-170 (362)
164 d1qvra3 c.37.1.20 (A:536-850) 38.5 7.5 0.00055 37.4 2.9 17 97-113 54-70 (315)
165 d2abka_ a.96.1.1 (A:) Endonucl 37.9 13 0.00094 33.6 4.4 54 554-607 66-128 (211)
166 d1r69a_ a.35.1.2 (A:) 434 C1 r 37.6 14 0.001 26.2 3.7 35 570-607 2-37 (63)
167 d1w36b1 c.37.1.19 (B:1-485) Ex 37.5 2.6 0.00019 41.7 -0.8 22 94-115 14-35 (485)
168 d1y7ya1 a.35.1.3 (A:5-73) Rest 37.0 16 0.0011 26.6 4.0 36 569-607 9-45 (69)
169 d1bifa1 c.37.1.7 (A:37-249) 6- 36.4 5.7 0.00042 34.4 1.5 16 97-112 3-18 (213)
170 d2b5aa1 a.35.1.3 (A:1-77) Regu 36.1 17 0.0012 26.9 4.1 37 568-607 9-46 (77)
171 d2a6ca1 a.35.1.13 (A:1-69) HTH 35.7 17 0.0013 26.4 4.0 38 568-608 5-43 (69)
172 d1lw7a2 c.37.1.1 (A:220-411) T 35.7 3.9 0.00028 34.3 0.2 15 98-112 9-23 (192)
173 d2d6fc1 a.182.1.2 (C:445-503) 35.5 6.2 0.00045 28.6 1.3 50 558-612 8-57 (59)
174 d1u94a1 c.37.1.11 (A:6-268) Re 35.2 4.6 0.00034 38.0 0.7 31 83-113 37-71 (263)
175 d1m7ga_ c.37.1.4 (A:) Adenosin 34.9 8 0.00058 34.7 2.3 28 84-111 11-39 (208)
176 d1x57a1 a.35.1.12 (A:8-85) End 34.8 18 0.0013 27.1 4.1 39 566-607 3-42 (78)
177 d2r1jl1 a.35.1.2 (L:3-68) P22 34.7 13 0.00091 26.8 3.0 35 570-607 4-39 (66)
178 d1teva_ c.37.1.1 (A:) UMP/CMP 34.7 5.1 0.00037 34.8 0.8 13 99-111 4-16 (194)
179 d1tdza1 a.156.1.2 (A:132-219) 34.7 7.2 0.00053 30.5 1.7 29 563-593 35-63 (88)
180 d2croa_ a.35.1.2 (A:) cro 434 34.7 20 0.0015 25.6 4.3 35 570-607 4-39 (65)
181 d2hkja1 a.156.1.3 (A:229-306) 34.1 25 0.0018 26.3 4.9 38 563-607 34-71 (78)
182 d3adka_ c.37.1.1 (A:) Adenylat 33.9 5.5 0.0004 34.8 1.0 15 97-111 9-23 (194)
183 d1zina1 c.37.1.1 (A:1-125,A:16 33.9 5.4 0.00039 34.0 0.9 13 99-111 3-15 (182)
184 d1r6bx3 c.37.1.20 (X:437-751) 33.6 11 0.00083 35.9 3.4 17 97-113 53-69 (315)
185 d2cdna1 c.37.1.1 (A:1-181) Ade 33.4 5.5 0.0004 34.2 0.8 13 99-111 3-15 (181)
186 d1hv8a1 c.37.1.19 (A:3-210) Pu 33.0 9.6 0.0007 33.9 2.5 25 88-113 35-59 (208)
187 d1mkya1 c.37.1.8 (A:2-172) Pro 32.6 4.6 0.00034 34.4 0.1 17 97-113 1-17 (171)
188 d1s3ga1 c.37.1.1 (A:1-125,A:16 32.4 5.9 0.00043 34.1 0.9 13 99-111 3-15 (182)
189 d1e4va1 c.37.1.1 (A:1-121,A:15 31.5 6 0.00043 33.9 0.7 13 99-111 3-15 (179)
190 d1jx4a2 e.8.1.7 (A:1-240) DinB 30.8 28 0.002 31.6 5.5 39 560-606 180-218 (240)
191 d1htwa_ c.37.1.18 (A:) Hypothe 30.7 13 0.00094 32.3 2.8 41 73-113 10-50 (158)
192 d1z3eb1 a.60.3.1 (B:245-311) C 30.0 24 0.0017 26.1 3.9 31 552-582 33-63 (67)
193 d1rz3a_ c.37.1.6 (A:) Hypothet 29.9 13 0.00098 31.3 2.9 17 96-112 22-38 (198)
194 d1um8a_ c.37.1.20 (A:) ClpX {H 29.9 6.4 0.00047 38.8 0.7 18 95-112 67-84 (364)
195 d1e6ca_ c.37.1.2 (A:) Shikimat 29.9 6.1 0.00045 33.7 0.5 14 98-111 4-17 (170)
196 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 29.7 5.4 0.00039 40.9 0.1 17 99-115 27-43 (623)
197 d1ttya_ a.4.13.2 (A:) Sigma70 29.6 37 0.0027 26.2 5.2 44 569-612 21-66 (87)
198 d1akya1 c.37.1.1 (A:3-130,A:16 29.6 7 0.00051 33.7 0.8 14 99-112 5-18 (180)
199 d1xjca_ c.37.1.10 (A:) Molybdo 29.4 8.4 0.00061 32.5 1.3 14 100-113 5-18 (165)
200 d2ak3a1 c.37.1.1 (A:0-124,A:16 28.8 7.3 0.00053 34.2 0.8 14 99-112 9-22 (189)
201 d3bzka1 a.60.2.6 (A:474-563) T 28.6 10 0.00076 29.7 1.7 22 555-576 62-83 (90)
202 d1ak2a1 c.37.1.1 (A:14-146,A:1 28.6 7.4 0.00054 33.6 0.8 12 101-112 8-19 (190)
203 d1k82a1 a.156.1.2 (A:129-216) 28.3 12 0.00086 29.2 1.9 29 563-593 35-63 (88)
204 d1gkya_ c.37.1.1 (A:) Guanylat 27.8 7.8 0.00057 33.7 0.8 13 99-111 4-16 (186)
205 d1bl0a1 a.4.1.8 (A:9-62) MarA 27.3 54 0.0039 22.2 5.4 40 570-610 4-45 (54)
206 d1xp8a1 c.37.1.11 (A:15-282) R 27.3 7.3 0.00053 36.8 0.6 31 83-113 40-74 (268)
207 d2o38a1 a.35.1.13 (A:28-116) H 27.3 26 0.0019 26.8 4.0 37 569-608 11-48 (89)
208 d2bmfa2 c.37.1.14 (A:178-482) 27.0 9 0.00066 35.3 1.2 15 99-113 12-26 (305)
209 d1ku3a_ a.4.13.2 (A:) Sigma70 26.2 60 0.0044 23.1 5.6 45 568-612 10-56 (61)
210 d1viaa_ c.37.1.2 (A:) Shikimat 26.2 8.9 0.00065 32.5 0.9 13 99-111 3-15 (161)
211 d1lvga_ c.37.1.1 (A:) Guanylat 25.5 9.1 0.00066 33.5 0.8 13 99-111 3-15 (190)
212 d1k3xa1 a.156.1.2 (A:125-213) 25.3 49 0.0035 25.3 5.3 39 563-608 39-77 (89)
213 d1b0na2 a.35.1.3 (A:1-68) SinR 25.0 28 0.002 24.9 3.5 34 571-607 3-37 (68)
214 d1s96a_ c.37.1.1 (A:) Guanylat 24.9 9.5 0.00069 34.1 0.9 15 98-112 4-18 (205)
215 d1lb2b_ a.60.3.1 (B:) C-termin 24.4 31 0.0023 25.8 3.7 29 554-582 34-62 (72)
216 d3ci0k2 a.60.16.1 (K:94-203) P 23.9 53 0.0039 26.0 5.4 47 559-605 25-100 (110)
217 d1w44a_ c.37.1.11 (A:) NTPase 23.9 13 0.00096 35.9 1.7 15 97-111 124-138 (321)
218 d1ckea_ c.37.1.1 (A:) CMP kina 23.2 12 0.00084 32.6 1.1 15 98-112 5-19 (225)
219 d1t5la1 c.37.1.19 (A:2-414) Nu 23.0 17 0.0013 36.2 2.5 47 64-115 4-50 (413)
220 d1v5wa_ c.37.1.11 (A:) Meiotic 22.5 16 0.0011 32.2 1.9 29 84-112 22-53 (258)
221 d1np6a_ c.37.1.10 (A:) Molybdo 22.4 12 0.00085 31.0 0.9 14 99-112 5-18 (170)
222 d2p7vb1 a.4.13.2 (B:546-613) S 22.4 64 0.0047 23.5 5.2 44 569-612 8-53 (68)
223 d2akab1 c.37.1.8 (B:6-304) Dyn 22.0 2.5E+02 0.019 24.8 13.1 15 99-113 29-43 (299)
224 d1utxa_ a.35.1.3 (A:) Putative 22.0 9.6 0.0007 27.6 0.2 34 571-607 3-37 (66)
225 d1nksa_ c.37.1.1 (A:) Adenylat 21.8 12 0.00085 31.4 0.8 15 99-113 4-18 (194)
226 d2iyva1 c.37.1.2 (A:2-166) Shi 21.7 12 0.00088 31.5 0.9 13 99-111 4-16 (165)
227 d2cxxa1 c.37.1.8 (A:2-185) GTP 21.6 9.1 0.00066 32.4 -0.0 17 97-113 1-17 (184)
228 d1l2ta_ c.37.1.12 (A:) MJ0796 21.3 10 0.00073 35.0 0.2 16 98-113 33-48 (230)
229 d1wf3a1 c.37.1.8 (A:3-180) GTP 21.3 9.8 0.00071 32.4 0.1 19 95-113 4-22 (178)
230 d2auwa1 a.35.1.10 (A:88-154) H 21.2 47 0.0034 24.3 4.1 33 571-606 3-36 (67)
231 d1r6bx2 c.37.1.20 (X:169-436) 20.4 26 0.0019 32.7 3.1 41 65-113 16-56 (268)
232 d1rifa_ c.37.1.23 (A:) DNA hel 20.4 9.3 0.00068 35.9 -0.2 25 87-113 121-145 (282)
233 d1rp3a2 a.4.13.2 (A:164-234) S 20.3 69 0.0051 22.6 5.0 40 570-612 25-65 (71)
234 d1ci4a_ a.60.5.1 (A:) Barrier- 20.0 23 0.0017 27.7 2.1 46 558-609 18-67 (89)
No 1
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=100.00 E-value=1.3e-74 Score=616.08 Aligned_cols=313 Identities=27% Similarity=0.425 Sum_probs=273.8
Q ss_pred CeEEEEEeCCCCChhhcc--CCcEEEeCCCCCCCCeEEEEeCCCCCCCceeeEeeeeecCCCChHHHHhhhhHHHHHHHh
Q 035971 15 KARVIAKIRGFADLEAES--ANWVCIQKPNGEDSDSVTVSFGEQPSSRKECYKLDYCYEQNEGNGIIFAREVKPLISEVF 92 (614)
Q Consensus 15 ~VrV~vRvRP~~~~e~~~--~~~v~v~~~~~~d~~~v~v~~~~~~~~~~~~F~FD~VF~~~asQ~eVf~~~v~plV~~vl 92 (614)
+|+|+|||||+.+.|... ..++.+. +...+..... ....+.|.||+||+++++|++||+. +.|+|++++
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~-----~~~~~~~~~~---~~~~~~f~FD~vf~~~~~q~~vy~~-v~~lv~~~l 71 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSV-----DEFTVEHLWK---DDKAKQHMYDRVFDGNATQDDVFED-TKYLVQSAV 71 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEEC-----STTEEEEECS---SSSEEEEECSEEECTTCCHHHHHHT-TTHHHHHHH
T ss_pred CeEEEEEcCCCChhhcccCCCCeEEeC-----CCCeEEecCC---CCCceEEECCeecCCCCCHHHHHHH-HHHHHHHHh
Confidence 699999999999888655 3344432 2222222222 2356899999999999999999986 689999999
Q ss_pred cCCceEEEeeccCCCCcceEeecCCCCcchhHHHHHHHHhhccc----cCceEEEEEEEEecceeccccCccc---ccce
Q 035971 93 NGINATIVACGAKGSGKTRVIQGSYEEPGLAALAVDEILSISEK----MGKSITISFYEIFQDHVYDLLDPKQ---QEVQ 165 (614)
Q Consensus 93 ~G~N~tI~aYGqTGSGKTyTm~G~~~~~GLipral~~LF~~~~~----~~~sV~vS~~EIYnE~V~DLL~~~~---~~l~ 165 (614)
+|||+||||||||||||||||+|+.+++||+||++++||..+.+ ..+.|++||+|||||+++|||++.. ..+.
T Consensus 72 ~G~n~~i~aYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~ 151 (364)
T d1sdma_ 72 DGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLD 151 (364)
T ss_dssp TTCEEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCE
T ss_pred cCCceeeeccccCCCCcccccccCccccchhHHHHHHHHhhhhhccccccceEEEEEEEEeccccccccCcccccccccc
Confidence 99999999999999999999999999999999999999988763 4578999999999999999998754 3578
Q ss_pred EEecCCCceEecCCeEEEcCCHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEEEeeccC---ccccceeEEEeCCC
Q 035971 166 ILENGQGKIQLKGLSQVPVKSISEFQKLYISMHNSRKPVQKITMDLPRRSHKGLIVNVSPVSN---FLPTGKMNFVDLAG 242 (614)
Q Consensus 166 i~ed~~~~~~v~gLtev~V~S~ee~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~I~v~~~~~---~~~~skL~fVDLAG 242 (614)
+++++.++++|.|++++.|.+++|++.++..|..+|++++|.+|..|||||+||++++.+... ....++|+||||||
T Consensus 152 ~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~~~~~~kl~~vDLAG 231 (364)
T d1sdma_ 152 IKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAG 231 (364)
T ss_dssp EEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCC
T ss_pred eeecccCccccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccCcceeeeEEEEeechhh
Confidence 999999999999999999999999999999999999999999999999999999999987655 45679999999999
Q ss_pred ccccccccCccchhhhhHHhhhhHHHHHHHHHHHhcCCCCccCCCChhhhhhhhccCCCceEEEEEEcCcC------chh
Q 035971 243 YQDIRRKSTEGSIFVENTKVNKSIYTLFNVVYALNANESHVPYRESKLTRMLQESLGCKSKILMLTCLLPR------SVS 316 (614)
Q Consensus 243 sEr~~k~~~~g~~l~E~~~INkSL~aL~~vI~aL~~~~~~vPyRdSkLTrLLqdsLgGnskt~mI~~vsP~------Tl~ 316 (614)
+||..++++.|.+++|+..||+||.+|++||.+|+++..|||||+||||+||+|+|||||+|+|||||||+ |++
T Consensus 232 sEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~ 311 (364)
T d1sdma_ 232 SERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHN 311 (364)
T ss_dssp CSCCCC---------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHH
T ss_pred ccccccccccCceeeeccccccchhhHHHHHHHHHcCCCcCCchhhhhhHHHHhhcCCCceEEEEEEeCCCcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHHHHHhHhhhhhcCCCcccc
Q 035971 317 TTKTQTGSQMHSSTKKATGVA 337 (614)
Q Consensus 317 TL~~asr~~r~i~nk~~~~~~ 337 (614)
||+||+++ +.|+|+|+.|..
T Consensus 312 TL~fa~~a-k~i~n~p~~n~~ 331 (364)
T d1sdma_ 312 SLTYASRV-RSIVNDPSKNVS 331 (364)
T ss_dssp HHHHHHHH-TTCCCCCCCCEE
T ss_pred HHHHHHHH-hhcccCCcccCC
Confidence 99999999 999999987754
No 2
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=100.00 E-value=4.8e-72 Score=595.91 Aligned_cols=309 Identities=25% Similarity=0.422 Sum_probs=250.4
Q ss_pred CCCeEEEEEeCCCCChhhccCCcEEEeCCCCCCCCeEEEEeCCCC-----CCCceeeEeeeeecCCCChHHHHhhhhHHH
Q 035971 13 SKKARVIAKIRGFADLEAESANWVCIQKPNGEDSDSVTVSFGEQP-----SSRKECYKLDYCYEQNEGNGIIFAREVKPL 87 (614)
Q Consensus 13 ~~~VrV~vRvRP~~~~e~~~~~~v~v~~~~~~d~~~v~v~~~~~~-----~~~~~~F~FD~VF~~~asQ~eVf~~~v~pl 87 (614)
.++|+|+|||||+.+.|...+....+..+ +...+.+.-+... ....+.|.||+||+++++|++||+..+.|+
T Consensus 29 ~~~I~V~vRvRPl~~~E~~~~~~~~v~~~---~~~~~~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~Q~~Vy~~~~~pl 105 (362)
T d1v8ka_ 29 EHRICVCVRKRPLNKQELAKKEIDVISVP---SKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPL 105 (362)
T ss_dssp CCCEEEEEEECCCCHHHHHTTCCBCEECC---SSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHH
T ss_pred CCCEEEEEEeCCCChHHhhCCCceEEEEC---CCcEEEEeCCccccccccCcCceeEeCCeecCCCCCHHHHHHHHHHHH
Confidence 46899999999999988766443333322 2223333322111 123578999999999999999999999999
Q ss_pred HHHHhcCCceEEEeeccCCCCcceEeecCC------CCcchhHHHHHHHHhhccc-----cCceEEEEEEEEecceeccc
Q 035971 88 ISEVFNGINATIVACGAKGSGKTRVIQGSY------EEPGLAALAVDEILSISEK-----MGKSITISFYEIFQDHVYDL 156 (614)
Q Consensus 88 V~~vl~G~N~tI~aYGqTGSGKTyTm~G~~------~~~GLipral~~LF~~~~~-----~~~sV~vS~~EIYnE~V~DL 156 (614)
|+++|+|||+||||||||||||||||+|+. .++||+||++++||..++. ..+.|++||+|||||+++||
T Consensus 106 v~~~l~G~n~tifaYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~~~v~vS~~EIyne~i~DL 185 (362)
T d1v8ka_ 106 VQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDL 185 (362)
T ss_dssp HHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEET
T ss_pred HHHHHhccCceEEeeccCCCCCceeeeecCCCCcccccCCeeeehhhhHHHHhhcccccccchhheeeeeeecCCeEEec
Confidence 999999999999999999999999999974 3689999999999988763 47899999999999999999
Q ss_pred cCcccccceEEecCCCceEecCCeEEEcCCHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEEEeeccCccccceeE
Q 035971 157 LDPKQQEVQILENGQGKIQLKGLSQVPVKSISEFQKLYISMHNSRKPVQKITMDLPRRSHKGLIVNVSPVSNFLPTGKMN 236 (614)
Q Consensus 157 L~~~~~~l~i~ed~~~~~~v~gLtev~V~S~ee~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~I~v~~~~~~~~~skL~ 236 (614)
|++... +.+++++.+++++.|++++.|.|++|++.++..|..+|++++|.+|..|||||+||+|.+.+.. ...++|+
T Consensus 186 L~~~~~-~~~~~~~~~~~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~i~~i~i~~~~--~~~~~l~ 262 (362)
T d1v8ka_ 186 LNKKAK-LRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG--RLHGKFS 262 (362)
T ss_dssp TTTTEE-EEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESSS--SEEEEEE
T ss_pred ccCCcc-ccccccccCCcccCCCEEEEecCHHHHHHHHhccccccccccccCcccCcceeeEEEEEEEecc--eeeeeEe
Confidence 987664 6789999999999999999999999999999999999999999999999999999999998754 4568999
Q ss_pred EEeCCCccccccccCc-cchhhhhHHhhhhHHHHHHHHHHHhcCCCCccCCCChhhhhhhhc-cCCCceEEEEEEcCcC-
Q 035971 237 FVDLAGYQDIRRKSTE-GSIFVENTKVNKSIYTLFNVVYALNANESHVPYRESKLTRMLQES-LGCKSKILMLTCLLPR- 313 (614)
Q Consensus 237 fVDLAGsEr~~k~~~~-g~~l~E~~~INkSL~aL~~vI~aL~~~~~~vPyRdSkLTrLLqds-LgGnskt~mI~~vsP~- 313 (614)
||||||+||..++... +.++.|+..||+||++|++||.+|++++.|||||+||||+||||+ |||||+|+||+||+|+
T Consensus 263 ~VDLAGsEr~~~~~~~~~~~~~E~~~IN~SL~~L~~vi~aL~~~~~hiPyR~SkLT~lLkdsllGgns~t~~i~~vsp~~ 342 (362)
T d1v8ka_ 263 LVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGI 342 (362)
T ss_dssp EEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSSEEEEEEEEECCBG
T ss_pred eeecccccccccccccchhhhhhhhhhcccHHHHHHHHHHHhcCCCcCCCccCHHHHhhhhccCCCCccEEEEEEeCCCh
Confidence 9999999999887554 467889999999999999999999999999999999999999998 7999999999999998
Q ss_pred -----chhHHHHHHhHhhhh
Q 035971 314 -----SVSTTKTQTGSQMHS 328 (614)
Q Consensus 314 -----Tl~TL~~asr~~r~i 328 (614)
|++||+||+|+ +.|
T Consensus 343 ~~~~eTl~TL~fa~ra-k~I 361 (362)
T d1v8ka_ 343 SSCEYTLNTLRYADRV-KEL 361 (362)
T ss_dssp GGHHHHHHHHHHHHHH-HTT
T ss_pred hhHHHHHHHHHHHHHH-hcC
Confidence 99999999999 766
No 3
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=100.00 E-value=2.3e-72 Score=596.55 Aligned_cols=316 Identities=27% Similarity=0.439 Sum_probs=285.8
Q ss_pred CCCCeEEEEEeCCCCChhhcc--CCcEEEeCCCCCCCCeEEEEeCCCCCCCceeeEeeeeecCCCChHHHHhhhhHHHHH
Q 035971 12 ISKKARVIAKIRGFADLEAES--ANWVCIQKPNGEDSDSVTVSFGEQPSSRKECYKLDYCYEQNEGNGIIFAREVKPLIS 89 (614)
Q Consensus 12 ~~~~VrV~vRvRP~~~~e~~~--~~~v~v~~~~~~d~~~v~v~~~~~~~~~~~~F~FD~VF~~~asQ~eVf~~~v~plV~ 89 (614)
.+.+|+|+|||||+.+.|... ..++.+.. .+.+.+ ... ...+.|.||+||+++++|++||+.++.|+|+
T Consensus 3 ~~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~-----~~~~~~--~~~--~~~~~f~FD~vf~~~~~q~~vy~~~~~plv~ 73 (354)
T d1goja_ 3 SANSIKVVARFRPQNRVEIESGGQPIVTFQG-----PDTCTV--DSK--EAQGSFTFDRVFDMSCKQSDIFDFSIKPTVD 73 (354)
T ss_dssp SSCBCEEEEEECCCCHHHHTTTCCBCEEECS-----TTEEEE--CST--TCCEEEECSEEECTTCCHHHHHHHHTHHHHH
T ss_pred CCCCEEEEEEcCCCChHHHhcCCceEEEEEC-----CCeEEE--cCC--CCcceEECCeEcCCCCCHHHHHHHHHHHHHH
Confidence 357899999999999888655 34555542 223333 222 3457899999999999999999999999999
Q ss_pred HHhcCCceEEEeeccCCCCcceEeecCC----CCcchhHHHHHHHHhhccc----cCceEEEEEEEEecceeccccCccc
Q 035971 90 EVFNGINATIVACGAKGSGKTRVIQGSY----EEPGLAALAVDEILSISEK----MGKSITISFYEIFQDHVYDLLDPKQ 161 (614)
Q Consensus 90 ~vl~G~N~tI~aYGqTGSGKTyTm~G~~----~~~GLipral~~LF~~~~~----~~~sV~vS~~EIYnE~V~DLL~~~~ 161 (614)
++++|||+||||||+|||||||||+|+. +.+||+||++++||..... ..+.|+|||+|||+|+++|||++..
T Consensus 74 ~~l~G~n~ti~aYG~tgSGKT~Tm~G~~~~~~~~~Giipr~l~~l~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~ 153 (354)
T d1goja_ 74 DILNGYNGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQN 153 (354)
T ss_dssp HHTTTCCEEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTC
T ss_pred HhhccCceeEEecccCCCCcceeeecccccCcccceecchhHHHHhhhhcccccCceEEEEeehhheecceEeecccccc
Confidence 9999999999999999999999999953 4579999999999998763 4578999999999999999999999
Q ss_pred ccceEEecCCCceEecCCeEEEcCCHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEEEeeccC---ccccceeEEE
Q 035971 162 QEVQILENGQGKIQLKGLSQVPVKSISEFQKLYISMHNSRKPVQKITMDLPRRSHKGLIVNVSPVSN---FLPTGKMNFV 238 (614)
Q Consensus 162 ~~l~i~ed~~~~~~v~gLtev~V~S~ee~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~I~v~~~~~---~~~~skL~fV 238 (614)
..+.+++++.+++++.|++++.|.+++|+..++..|..+|+.++|.+|..|||||+||+|++.+... ....++|+||
T Consensus 154 ~~l~~~e~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~~~~~s~l~~v 233 (354)
T d1goja_ 154 DNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSAKSGQLFLV 233 (354)
T ss_dssp CSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred cceeeeeecCCCEeecCceeecchhHHHHHHHHhhcccccccccccccccccccceEEEEEEEEeecCCCCeEEEEEEEe
Confidence 8999999999999999999999999999999999999999999999999999999999999987654 3457899999
Q ss_pred eCCCccccccccCccchhhhhHHhhhhHHHHHHHHHHHhcC-CCCccCCCChhhhhhhhccCCCceEEEEEEcCcC----
Q 035971 239 DLAGYQDIRRKSTEGSIFVENTKVNKSIYTLFNVVYALNAN-ESHVPYRESKLTRMLQESLGCKSKILMLTCLLPR---- 313 (614)
Q Consensus 239 DLAGsEr~~k~~~~g~~l~E~~~INkSL~aL~~vI~aL~~~-~~~vPyRdSkLTrLLqdsLgGnskt~mI~~vsP~---- 313 (614)
||||+|+..++++.+.+++|+..||+||.+|++||.+|+.+ ..|||||+||||+||+|+|||+|+|+||+||+|+
T Consensus 234 DLAGsE~~~~~~~~~~~~~e~~~IN~SL~~L~~vi~aL~~~~~~~iPyR~SkLT~lLkd~Lgg~s~t~~I~~isp~~~~~ 313 (354)
T d1goja_ 234 DLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYND 313 (354)
T ss_dssp ECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGH
T ss_pred eccCcccccccCCccchhhhhhhhhHHHHHHHHHHHHHhcCCCCcCCcccCHHHHHHHHhcCCCCeEEEEEEECCCcccH
Confidence 99999999999999999999999999999999999999986 4799999999999999999999999999999998
Q ss_pred --chhHHHHHHhHhhhhhcCCCcccc
Q 035971 314 --SVSTTKTQTGSQMHSSTKKATGVA 337 (614)
Q Consensus 314 --Tl~TL~~asr~~r~i~nk~~~~~~ 337 (614)
|++||+||+++ +.|+++|+.|..
T Consensus 314 ~eTl~TL~fa~~~-~~i~~~~~~n~~ 338 (354)
T d1goja_ 314 AETLSTLRFGMRA-KSIKNKAKVNAE 338 (354)
T ss_dssp HHHHHHHHHHHHH-HTCBCCCCCCSS
T ss_pred HHHHHHHHHHHHH-hccCccceEcCC
Confidence 99999999999 999999887764
No 4
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=100.00 E-value=1.3e-72 Score=596.42 Aligned_cols=312 Identities=27% Similarity=0.415 Sum_probs=262.7
Q ss_pred CeEEEEEeCCCCChhhcc--CCcEEEeCCCCCCCCeEEEEeCCCC-CCCceeeEeeeeecCCCChHHHHhhhhHHHHHHH
Q 035971 15 KARVIAKIRGFADLEAES--ANWVCIQKPNGEDSDSVTVSFGEQP-SSRKECYKLDYCYEQNEGNGIIFAREVKPLISEV 91 (614)
Q Consensus 15 ~VrV~vRvRP~~~~e~~~--~~~v~v~~~~~~d~~~v~v~~~~~~-~~~~~~F~FD~VF~~~asQ~eVf~~~v~plV~~v 91 (614)
||||+||+||+.+.|... ..++.+.. +...+.+...... ....+.|.||+||+++++|++||+.++.|+|+++
T Consensus 1 NI~V~vRvRP~~~~e~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~~~~~lv~~~ 76 (345)
T d1x88a1 1 NIQVVVRCRPFNLAERKASAHSIVECDP----VRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEV 76 (345)
T ss_dssp CCEEEEEECCCCHHHHHTTCCCCEEEET----TTTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEECCCChhhhccCCCeEEEEcC----CCceEEEecCCCCCCCCcceEecCEEeCCCCCHHHHHHHHHHHhHHHH
Confidence 799999999999887654 55677653 3345555433221 2335789999999999999999999999999999
Q ss_pred hcCCceEEEeeccCCCCcceEeecCCCC-----------cchhHHHHHHHHhhccc--cCceEEEEEEEEecceeccccC
Q 035971 92 FNGINATIVACGAKGSGKTRVIQGSYEE-----------PGLAALAVDEILSISEK--MGKSITISFYEIFQDHVYDLLD 158 (614)
Q Consensus 92 l~G~N~tI~aYGqTGSGKTyTm~G~~~~-----------~GLipral~~LF~~~~~--~~~sV~vS~~EIYnE~V~DLL~ 158 (614)
++|+|+||||||||||||||||+|+... +||+||++++||+.+.. ..+.|+|||+|||+|+++|||+
T Consensus 77 l~G~n~~i~aYGqtgSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~v~vS~~EIy~e~v~DLL~ 156 (345)
T d1x88a1 77 IMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLN 156 (345)
T ss_dssp HTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSSSSEEEEEEEEEEEEETTEEEETTC
T ss_pred hccCCceEEeeeeccccceEEeeecCCcccccccccCccCCcHHHHHHHHHHhhhccCceEEEEEEEEEEECCeeEECCC
Confidence 9999999999999999999999998643 69999999999998874 4568999999999999999998
Q ss_pred ccc-----ccceEEecCCCceEecCCeEEEcCCHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEEEeeccC-----
Q 035971 159 PKQ-----QEVQILENGQGKIQLKGLSQVPVKSISEFQKLYISMHNSRKPVQKITMDLPRRSHKGLIVNVSPVSN----- 228 (614)
Q Consensus 159 ~~~-----~~l~i~ed~~~~~~v~gLtev~V~S~ee~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~I~v~~~~~----- 228 (614)
+.. ..+...++..++++|.|++++.|.|++|++.+|..|..+|+++.|.+|..|||||+||+|++.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~SsRsH~i~~i~i~~~~~~~~~~ 236 (345)
T d1x88a1 157 PSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGE 236 (345)
T ss_dssp TTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECTTSC
T ss_pred CCCcccccceeeecccCCCCEEEcCCEEEEeCCHHHHHHHHHhhhccccccccCccccccccceEEEEEEEEeeccCCCC
Confidence 653 2345566677889999999999999999999999999999999999999999999999999976543
Q ss_pred -ccccceeEEEeCCCccccccccCccchhhhhHHhhhhHHHHHHHHHHHhcCCCCccCCCChhhhhhhhccCCCceEEEE
Q 035971 229 -FLPTGKMNFVDLAGYQDIRRKSTEGSIFVENTKVNKSIYTLFNVVYALNANESHVPYRESKLTRMLQESLGCKSKILML 307 (614)
Q Consensus 229 -~~~~skL~fVDLAGsEr~~k~~~~g~~l~E~~~INkSL~aL~~vI~aL~~~~~~vPyRdSkLTrLLqdsLgGnskt~mI 307 (614)
....|+|+||||||+|+..+....+.++.|+..||+||.+|++||.+|+.++.|||||+||||+||+|+|||+|+|+||
T Consensus 237 ~~~~~s~l~~vDLAGsEr~~~~~~~~~~~~e~~~in~Sl~~L~~vi~al~~~~~~iPyR~SkLT~lL~d~Lgg~s~t~~i 316 (345)
T d1x88a1 237 ELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSII 316 (345)
T ss_dssp EEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGSSSSSEEEEE
T ss_pred CceEeeeEEEEecCCccccccccchhhhhcccccccchHHHHHHHHHHHhcCCCcCCCccCHHHHHhHHhcCCCCcEEEE
Confidence 2356899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcC------chhHHHHHHhHhhhhhcC
Q 035971 308 TCLLPR------SVSTTKTQTGSQMHSSTK 331 (614)
Q Consensus 308 ~~vsP~------Tl~TL~~asr~~r~i~nk 331 (614)
+||+|+ |++||+||+++ +.|+||
T Consensus 317 ~~vsp~~~~~~eTl~tL~fa~~~-~~I~nk 345 (345)
T d1x88a1 317 ATISPASLNLEETLSTLEYAHRA-KNILNK 345 (345)
T ss_dssp EEECCCGGGHHHHHHHHHHHHHH-TTCCCC
T ss_pred EEeCCchhhHHHHHHHHHHHHHh-hhccCC
Confidence 999998 99999999999 999885
No 5
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=100.00 E-value=3.8e-71 Score=586.19 Aligned_cols=305 Identities=26% Similarity=0.410 Sum_probs=262.8
Q ss_pred CCeEEEEEeCCCCChhhcc--CCcEEEeCCCCCCCCeEEEEeCCCCCCCceeeEeeeeecCC--------CChHHHHhhh
Q 035971 14 KKARVIAKIRGFADLEAES--ANWVCIQKPNGEDSDSVTVSFGEQPSSRKECYKLDYCYEQN--------EGNGIIFARE 83 (614)
Q Consensus 14 ~~VrV~vRvRP~~~~e~~~--~~~v~v~~~~~~d~~~v~v~~~~~~~~~~~~F~FD~VF~~~--------asQ~eVf~~~ 83 (614)
..|||+|||||+.+.|... ..++.+.. +.+.+..+.......+.|.||+||+++ ++|++||+.+
T Consensus 1 ~sIrV~vRvRP~~~~E~~~~~~~~~~~~~------~~~~~~~~~~~~~~~k~f~FD~vf~~~~~~~~~~~~sQ~~vy~~~ 74 (349)
T d2zfia1 1 ASVKVAVRVRPFNSREMSRDSKCIIQMSG------STTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDI 74 (349)
T ss_dssp CCEEEEEEECCCCHHHHHTTCCBCEEEET------TEEEECCTTCTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHT
T ss_pred CcEEEEEEeCCCChhHhcCCCcEEEEECC------CcEEEECCCCCCcCCeeEEeceEeCCCCCccccccccHHHHHHHh
Confidence 3699999999999887654 33455532 234443333333456899999999987 5799999999
Q ss_pred hHHHHHHHhcCCceEEEeeccCCCCcceEeecCCC--CcchhHHHHHHHHhhccc-----cCceEEEEEEEEecceeccc
Q 035971 84 VKPLISEVFNGINATIVACGAKGSGKTRVIQGSYE--EPGLAALAVDEILSISEK-----MGKSITISFYEIFQDHVYDL 156 (614)
Q Consensus 84 v~plV~~vl~G~N~tI~aYGqTGSGKTyTm~G~~~--~~GLipral~~LF~~~~~-----~~~sV~vS~~EIYnE~V~DL 156 (614)
+.|+|+++++|||+||||||||||||||||+|+.+ ++||+||++++||..++. ..+.|.+||+|||+|+++||
T Consensus 75 ~~plv~~~l~G~n~ti~aYGqTgSGKT~Tm~G~~~~~~~Glipr~l~~lf~~~~~~~~~~~~~~v~~S~~Eiyne~i~DL 154 (349)
T d2zfia1 75 GEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDL 154 (349)
T ss_dssp HHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEET
T ss_pred hHHHHHHHHhccCceeeeeccCCCCCceeeccCccccccCchHHHHhhhhhhccccccCCcceEEEEEeeeeeCCEEEec
Confidence 99999999999999999999999999999999864 799999999999998763 45689999999999999999
Q ss_pred cCccc-ccceEEecCCCceEecCCeEEEcCCHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEEEeeccC-------
Q 035971 157 LDPKQ-QEVQILENGQGKIQLKGLSQVPVKSISEFQKLYISMHNSRKPVQKITMDLPRRSHKGLIVNVSPVSN------- 228 (614)
Q Consensus 157 L~~~~-~~l~i~ed~~~~~~v~gLtev~V~S~ee~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~I~v~~~~~------- 228 (614)
|++.. ..+.+++++.++++|.|++++.|.+++|++.++..|..+|+++.|.+|..|||||++|++.+.+...
T Consensus 155 L~~~~~~~~~i~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssrsh~i~~i~i~~~~~~~~~~~~ 234 (349)
T d2zfia1 155 LNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNIT 234 (349)
T ss_dssp TCTTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCE
T ss_pred ccccccCCceEEecCCCCcEEEEeEEEeccCHHHHHHHHHhcccCeEeccCCCccccccccceEEEEEEEEecccCCCcc
Confidence 99854 5689999999999999999999999999999999999999999999999999999999999976433
Q ss_pred ccccceeEEEeCCCccccccccCccchhhhhHHhhhhHHHHHHHHHHHhc------------CCCCccCCCChhhhhhhh
Q 035971 229 FLPTGKMNFVDLAGYQDIRRKSTEGSIFVENTKVNKSIYTLFNVVYALNA------------NESHVPYRESKLTRMLQE 296 (614)
Q Consensus 229 ~~~~skL~fVDLAGsEr~~k~~~~g~~l~E~~~INkSL~aL~~vI~aL~~------------~~~~vPyRdSkLTrLLqd 296 (614)
....|+|+||||||+|+.++++..+.+++|+..||+||.+|++||.+|+. +..|||||+||||+||||
T Consensus 235 ~~~~s~l~~VDLAGsEr~~~~~~~g~~~~e~~~IN~SL~~L~~vi~aL~~~~~~~~~~~~~~~~~~IPyR~SkLT~lL~d 314 (349)
T d2zfia1 235 TEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRE 314 (349)
T ss_dssp EEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGG
T ss_pred cceeeEEEEeecccchhhhhcCCcccchhhccchhhHHHHHHHHHHHHHhhhcccccccccCCCCccCCcCCHHHHHHHH
Confidence 23468999999999999999999999999999999999999999999974 236999999999999999
Q ss_pred ccCCCceEEEEEEcCcC------chhHHHHHHhH
Q 035971 297 SLGCKSKILMLTCLLPR------SVSTTKTQTGS 324 (614)
Q Consensus 297 sLgGnskt~mI~~vsP~------Tl~TL~~asr~ 324 (614)
+|||+|+|+||+||+|. |++||+||+|+
T Consensus 315 ~Lgg~s~t~~I~~vsp~~~~~~eTl~TL~fa~ra 348 (349)
T d2zfia1 315 NLGGNSRTAMVAALSPADINYDETLSTLRYADRA 348 (349)
T ss_dssp GSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHT
T ss_pred hcCCCccEEEEEEeCCChhhHHHHHHHHHHHHhc
Confidence 99999999999999998 99999999998
No 6
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.9e-71 Score=582.59 Aligned_cols=301 Identities=27% Similarity=0.414 Sum_probs=274.5
Q ss_pred CCeEEEEEeCCCCChhhccC--CcEEEeCCCCCCCCeEEEEeCCCCCCCceeeEeeeeecCCCChHHHHhhhhHHHHHHH
Q 035971 14 KKARVIAKIRGFADLEAESA--NWVCIQKPNGEDSDSVTVSFGEQPSSRKECYKLDYCYEQNEGNGIIFAREVKPLISEV 91 (614)
Q Consensus 14 ~~VrV~vRvRP~~~~e~~~~--~~v~v~~~~~~d~~~v~v~~~~~~~~~~~~F~FD~VF~~~asQ~eVf~~~v~plV~~v 91 (614)
-||||+|||||+.+.|...+ .++.+.. ... +.. ..+.|.||+||+++++|++||+.++.|+|+++
T Consensus 5 ~NI~V~vRvRP~~~~e~~~~~~~~~~~~~-----~~~--~~~------~~~~f~FD~vf~~~~~q~~vf~~~~~~lv~~~ 71 (323)
T d1bg2a_ 5 CNIKVMCRFRPLNESEVNRGDKYIAKFQG-----EDT--VVI------ASKPYAFDRVFQSSTSQEQVYNDCAKKIVKDV 71 (323)
T ss_dssp CEEEEEEEECCCCHHHHHHTCCBCCEEET-----TTE--EEE------TTEEEECSEEECTTCCHHHHHHHHTHHHHHHH
T ss_pred CCEEEEEEeCCCChHHhccCCceEEEECC-----CCe--EEE------CCceeECCEEECCCCCHHHHHHHHHHHHHHHH
Confidence 47999999999998876543 3444432 122 222 24689999999999999999999999999999
Q ss_pred hcCCceEEEeeccCCCCcceEeecCCCC---cchhHHHHHHHHhhccc----cCceEEEEEEEEecceeccccCcccccc
Q 035971 92 FNGINATIVACGAKGSGKTRVIQGSYEE---PGLAALAVDEILSISEK----MGKSITISFYEIFQDHVYDLLDPKQQEV 164 (614)
Q Consensus 92 l~G~N~tI~aYGqTGSGKTyTm~G~~~~---~GLipral~~LF~~~~~----~~~sV~vS~~EIYnE~V~DLL~~~~~~l 164 (614)
++|+|+||||||||||||||||+|+..+ .||+||++.++|..+.. ..+.|.|||+|||||++||||.+...++
T Consensus 72 l~G~n~~i~aYGqtgSGKTyT~~G~~~~~~~~gii~r~l~~l~~~~~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~ 151 (323)
T d1bg2a_ 72 LEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNL 151 (323)
T ss_dssp HTTCCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTTCCSB
T ss_pred HcCCCcceeeecccCCCCceeccCCcccccccchhhhHHHHHHhhhhccccccceEEEEEEEEEEcCcccccccccccce
Confidence 9999999999999999999999997655 49999999999998763 4578999999999999999999999999
Q ss_pred eEEecCCCceEecCCeEEEcCCHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEEEeeccC---ccccceeEEEeCC
Q 035971 165 QILENGQGKIQLKGLSQVPVKSISEFQKLYISMHNSRKPVQKITMDLPRRSHKGLIVNVSPVSN---FLPTGKMNFVDLA 241 (614)
Q Consensus 165 ~i~ed~~~~~~v~gLtev~V~S~ee~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~I~v~~~~~---~~~~skL~fVDLA 241 (614)
.+++++.++++++|++++.|.+++|++.++..|.++|+++.|..|..|||||++|++++.+.+. ....|+|+|||||
T Consensus 152 ~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~~~~~R~~~~t~~n~~ssRsh~i~~i~v~~~~~~~~~~~~s~l~~vDLA 231 (323)
T d1bg2a_ 152 SVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLA 231 (323)
T ss_dssp CEEECTTSCEEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECC
T ss_pred eEeeccccceeecCCEEEEEeccHhHhHHhhhcccceeecccCCCCCCCccceEEEEEEEEEeCCCCcEEEEEEEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999988765 3557999999999
Q ss_pred CccccccccCccchhhhhHHhhhhHHHHHHHHHHHhcCCCCccCCCChhhhhhhhccCCCceEEEEEEcCcC------ch
Q 035971 242 GYQDIRRKSTEGSIFVENTKVNKSIYTLFNVVYALNANESHVPYRESKLTRMLQESLGCKSKILMLTCLLPR------SV 315 (614)
Q Consensus 242 GsEr~~k~~~~g~~l~E~~~INkSL~aL~~vI~aL~~~~~~vPyRdSkLTrLLqdsLgGnskt~mI~~vsP~------Tl 315 (614)
|+|+..+++..+.++.|+..||+||.+|++||.+|++++.|||||+||||+||+|+|||+|+|+||+||+|+ |+
T Consensus 232 Gse~~~~~~~~~~~~~e~~~iN~SL~~L~~vi~al~~~~~~iPyR~SkLT~lL~d~L~g~~~t~~I~~isp~~~~~~eTl 311 (323)
T d1bg2a_ 232 GSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETK 311 (323)
T ss_dssp CSCCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHH
T ss_pred cccccccccchhhhhhhhhcccccHHHHHHHHHHHhcCCCccCCccCHHHHHHHHhcCCCccEEEEEEECCcchhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred hHHHHHHhHhhhh
Q 035971 316 STTKTQTGSQMHS 328 (614)
Q Consensus 316 ~TL~~asr~~r~i 328 (614)
+||+||+|+ +.|
T Consensus 312 ~tL~fa~r~-k~I 323 (323)
T d1bg2a_ 312 STLLFGQRA-KTI 323 (323)
T ss_dssp HHHHHHHTS-CCC
T ss_pred HHHHHHHHh-cCC
Confidence 999999999 654
No 7
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00 E-value=3.7e-71 Score=582.10 Aligned_cols=303 Identities=26% Similarity=0.438 Sum_probs=261.8
Q ss_pred eEEEEEeCCCCChhhcc--CCcEEEeCCCCCCCCeEEEEeCCC-----CCCCceeeEeeeeecCCCChHHHHhhhhHHHH
Q 035971 16 ARVIAKIRGFADLEAES--ANWVCIQKPNGEDSDSVTVSFGEQ-----PSSRKECYKLDYCYEQNEGNGIIFAREVKPLI 88 (614)
Q Consensus 16 VrV~vRvRP~~~~e~~~--~~~v~v~~~~~~d~~~v~v~~~~~-----~~~~~~~F~FD~VF~~~asQ~eVf~~~v~plV 88 (614)
|||+|||||+.+.|... ..++.+.. ...+.+.-+.. .....+.|.||+||+++++|++||+..+.|+|
T Consensus 2 IkV~vRvRP~~~~E~~~~~~~~v~~~~-----~~~~~v~~~~~~~~~~~~~~~~~F~fD~Vf~~~~~q~~vy~~~~~plv 76 (330)
T d1ry6a_ 2 IKVVVRKRPLSELEKKKKDSDIITVKN-----NCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLI 76 (330)
T ss_dssp EEEEEEECCCCHHHHHTTCCBCEEEEE-----TTEEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHH
T ss_pred EEEEEEeCCCChHHHhcCCceEEEECC-----CcEEEEcCCccccccccCcCcceEeCCeecCCCCCHHHHHHHHHHHHH
Confidence 89999999999887654 44555542 23344432211 11234789999999999999999999999999
Q ss_pred HHHh-cCCceEEEeeccCCCCcceEeecCC-----CCcchhHHHHHHHHhhcc----ccCceEEEEEEEEecceeccccC
Q 035971 89 SEVF-NGINATIVACGAKGSGKTRVIQGSY-----EEPGLAALAVDEILSISE----KMGKSITISFYEIFQDHVYDLLD 158 (614)
Q Consensus 89 ~~vl-~G~N~tI~aYGqTGSGKTyTm~G~~-----~~~GLipral~~LF~~~~----~~~~sV~vS~~EIYnE~V~DLL~ 158 (614)
++++ +|+|+||||||||||||||||+|+. +++||+||++++||+.++ ...+.|.+||+|||||+++|||+
T Consensus 77 ~~~~~~G~n~~i~aYGqTGSGKTyTm~G~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~~v~~S~~EIyne~i~DLL~ 156 (330)
T d1ry6a_ 77 IDLYENGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQ 156 (330)
T ss_dssp HHHHHHCCEEEEEEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCC
T ss_pred HHHHhcCCCeEEEeeeccccccceeeecccccccccCCCchhHHHhhhhhhhhhhcccceEEEEEEEEeeeccccccccc
Confidence 9988 5999999999999999999999965 578999999999998875 35678999999999999999998
Q ss_pred cccccceEEecCCCceEecCCeEEEcCCHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEEEeeccCccccceeEEE
Q 035971 159 PKQQEVQILENGQGKIQLKGLSQVPVKSISEFQKLYISMHNSRKPVQKITMDLPRRSHKGLIVNVSPVSNFLPTGKMNFV 238 (614)
Q Consensus 159 ~~~~~l~i~ed~~~~~~v~gLtev~V~S~ee~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~I~v~~~~~~~~~skL~fV 238 (614)
+... +.+++++.+++++.|++++.|.+.+|++.++..|..+|.++.|.+|..|||||+||++++.........|+|+||
T Consensus 157 ~~~~-~~~~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRsh~i~~i~v~~~~~~~~~s~l~~v 235 (330)
T d1ry6a_ 157 KRKM-VAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDINKNTSLGKIAFI 235 (330)
T ss_dssp C------------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETTTTEEEEEEEEE
T ss_pred cccc-ceeeecCCCCccccCceEEEEeeccchhhhhhcccccccccccccccccCCcceEEEEEEEecccccccceeeee
Confidence 7654 778899999999999999999999999999999999999999999999999999999999988777778999999
Q ss_pred eCCCccccccccCccchh-hhhHHhhhhHHHHHHHHHHHhcCCCCccCCCChhhhhhhhccCCCceEEEEEEcCcC----
Q 035971 239 DLAGYQDIRRKSTEGSIF-VENTKVNKSIYTLFNVVYALNANESHVPYRESKLTRMLQESLGCKSKILMLTCLLPR---- 313 (614)
Q Consensus 239 DLAGsEr~~k~~~~g~~l-~E~~~INkSL~aL~~vI~aL~~~~~~vPyRdSkLTrLLqdsLgGnskt~mI~~vsP~---- 313 (614)
||||+|+..++.+.+... .|+..||+||.+|++||.+|++++.|||||+||||+||||+|||||+|+||+||+|.
T Consensus 236 DLAGsEr~~~~~~~~~~~~~e~~~IN~sL~~L~~vi~al~~~~~~iPyR~SkLT~lL~d~lggns~t~~I~~vsp~~~~~ 315 (330)
T d1ry6a_ 236 DLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCC 315 (330)
T ss_dssp ECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGGH
T ss_pred cccccccccccccCCchhhhhhhhhhHHHHHHHHHHHHHhcCCCcCCCccCHHHHHHHHhcCCCCeEEEEEEECCchhhH
Confidence 999999999888877654 699999999999999999999999999999999999999999999999999999998
Q ss_pred --chhHHHHHHhH
Q 035971 314 --SVSTTKTQTGS 324 (614)
Q Consensus 314 --Tl~TL~~asr~ 324 (614)
|++||+||+|+
T Consensus 316 ~eTl~tL~fa~ra 328 (330)
T d1ry6a_ 316 EQTLNTLRYSSRV 328 (330)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 99999999998
No 8
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=100.00 E-value=1.7e-70 Score=585.11 Aligned_cols=310 Identities=26% Similarity=0.403 Sum_probs=266.1
Q ss_pred CCCCCCCCCCeEEEEEeCCCCChhhccCCcEEEeCCCCCCCCeEEEEeCCC---CCCCceeeEeeeeecCCCChHHHHhh
Q 035971 6 ADTGLNISKKARVIAKIRGFADLEAESANWVCIQKPNGEDSDSVTVSFGEQ---PSSRKECYKLDYCYEQNEGNGIIFAR 82 (614)
Q Consensus 6 ~~~~~~~~~~VrV~vRvRP~~~~e~~~~~~v~v~~~~~~d~~~v~v~~~~~---~~~~~~~F~FD~VF~~~asQ~eVf~~ 82 (614)
++...+++|+|||+|||||+.+.|.....+..+.. +...+.+...+. .....+.|.||+||+++++|++||+
T Consensus 37 ~~~~~~~~gnIkV~vRvRP~~~~E~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~- 111 (368)
T d2ncda_ 37 HNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYH----DESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFE- 111 (368)
T ss_dssp HHHHHHHHCSEEEEEEECCCCGGGTTSCBCEEEEE----TTTEEEEECSCHHHHTTTCCCEEECSEEECTTCCHHHHHT-
T ss_pred HhHHHHhcCCEEEEEEeCCCCchhcCCCCcEEEeC----CCCeEEEccCCccccCCcCceeeECCeEECCCCCccchHH-
Confidence 33445678999999999999998877665555542 233444433221 1234578999999999999999996
Q ss_pred hhHHHHHHHhcCCceEEEeeccCCCCcceEeecCCCCcchhHHHHHHHHhhccc-----cCceEEEEEEEEecceecccc
Q 035971 83 EVKPLISEVFNGINATIVACGAKGSGKTRVIQGSYEEPGLAALAVDEILSISEK-----MGKSITISFYEIFQDHVYDLL 157 (614)
Q Consensus 83 ~v~plV~~vl~G~N~tI~aYGqTGSGKTyTm~G~~~~~GLipral~~LF~~~~~-----~~~sV~vS~~EIYnE~V~DLL 157 (614)
.+.|+|+++++|||+||||||||||||||||+|+..++||+||++++||+.+.. ..+.|.+||+|||||+++|||
T Consensus 112 ~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm~G~~~~~Giipr~~~~Lf~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL 191 (368)
T d2ncda_ 112 MVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLL 191 (368)
T ss_dssp TTHHHHHHHHTTCEEEEEEECSTTSSHHHHHTEETTEECHHHHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSSCEEETT
T ss_pred HHHHHHHHHhcccceeEEeeccCCCccceEecccccccchhhHHHHHHhhhhhhhccccccceEEEEEEEEecceeeccc
Confidence 678999999999999999999999999999999999999999999999988763 457899999999999999999
Q ss_pred Cccccc--ceEEecCCCceEecCCeEEEcCCHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEEEeeccC---cccc
Q 035971 158 DPKQQE--VQILENGQGKIQLKGLSQVPVKSISEFQKLYISMHNSRKPVQKITMDLPRRSHKGLIVNVSPVSN---FLPT 232 (614)
Q Consensus 158 ~~~~~~--l~i~ed~~~~~~v~gLtev~V~S~ee~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~I~v~~~~~---~~~~ 232 (614)
++.... ..+.+++.+++++.|++++.|.+++++..++..|.++|..+.+.+|..|||||+||+|++..... ....
T Consensus 192 ~~~~~~~~~~~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~~t~~n~~ssrSh~i~~i~v~~~~~~~~~~~~ 271 (368)
T d2ncda_ 192 SNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISV 271 (368)
T ss_dssp CSSCCCCCEEECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCCSSSCTTTTTTCEEEEEEEEEEECTTSCCEEE
T ss_pred ccccccccceeeccccccccccccceeccCCHHHHHHHHHHHHhhcccccccccccccccceEEEEEEEEEecCCCceEe
Confidence 987544 55668899999999999999999999999999999999999999999999999999999987665 3567
Q ss_pred ceeEEEeCCCccccccccCccchhhhhHHhhhhHHHHHHHHHHHhcCCCCccCCCChhhhhhhhccCCCceEEEEEEcCc
Q 035971 233 GKMNFVDLAGYQDIRRKSTEGSIFVENTKVNKSIYTLFNVVYALNANESHVPYRESKLTRMLQESLGCKSKILMLTCLLP 312 (614)
Q Consensus 233 skL~fVDLAGsEr~~k~~~~g~~l~E~~~INkSL~aL~~vI~aL~~~~~~vPyRdSkLTrLLqdsLgGnskt~mI~~vsP 312 (614)
|+|+||||||+|+... +.++.|+..||+||.+|++||.+|++++.|||||+||||+||+|+|||||+|+||+||+|
T Consensus 272 s~l~~VDLAGse~~~~----~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPyR~SkLT~lL~dsLggns~t~mI~~isp 347 (368)
T d2ncda_ 272 GSINLVDLAGSESPKT----STRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSP 347 (368)
T ss_dssp EEEEEEECCCCCCC--------------CTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGSSSSCEEEEEEEECC
T ss_pred eeeeeeeeccccccch----hhhhcccccchhhHHHHHHHHHHHhcCCCCCCCcCCHHHHHHHHhcCCCCeEEEEEEECC
Confidence 9999999999998654 457899999999999999999999999999999999999999999999999999999999
Q ss_pred C------chhHHHHHHhH
Q 035971 313 R------SVSTTKTQTGS 324 (614)
Q Consensus 313 ~------Tl~TL~~asr~ 324 (614)
+ |++||+||+|+
T Consensus 348 ~~~~~~eTl~TL~fa~ra 365 (368)
T d2ncda_ 348 FQDCFQESVKSLRFAASV 365 (368)
T ss_dssp BGGGHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHH
Confidence 9 99999999998
No 9
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=100.00 E-value=2.6e-70 Score=578.26 Aligned_cols=312 Identities=23% Similarity=0.352 Sum_probs=254.2
Q ss_pred CCeEEEEEeCCCCChhhcc-CCcEEEeCCCCCCCCeEEEEe-CCCCCCCceeeEeeeeecCCCChHHHHhhhhHHHHHHH
Q 035971 14 KKARVIAKIRGFADLEAES-ANWVCIQKPNGEDSDSVTVSF-GEQPSSRKECYKLDYCYEQNEGNGIIFAREVKPLISEV 91 (614)
Q Consensus 14 ~~VrV~vRvRP~~~~e~~~-~~~v~v~~~~~~d~~~v~v~~-~~~~~~~~~~F~FD~VF~~~asQ~eVf~~~v~plV~~v 91 (614)
|+|||+|||||+.+.+... ..++.+...++. ........ ........+.|.||+||+++++|++||+. +.|+|+.+
T Consensus 1 G~IrV~vRvRP~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~-v~~~v~~~ 78 (342)
T d1f9va_ 1 GNIRVYCRIRPALKNLENSDTSLINVNEFDDN-SGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKE-VGQLVQSS 78 (342)
T ss_dssp CEEEEEEEECCCCTTTCCCTTEEEEECCCBTT-TTBEEEEEEEGGGTTCEEEEEESEEECTTCCHHHHHHH-HHHHHGGG
T ss_pred CcEEEEEEeCcCCcccccCCCceEEeeccCCc-ceeeeccccccCCCCCceEeecCeEeCCCCCHHHHHHH-hhhhhcch
Confidence 7899999999998766544 445555432211 11111111 11223457899999999999999999985 77999999
Q ss_pred hcCCceEEEeeccCCCCcceEeecCCCCcchhHHHHHHHHhhccc-----cCceEEEEEEEEecceeccccCcccc----
Q 035971 92 FNGINATIVACGAKGSGKTRVIQGSYEEPGLAALAVDEILSISEK-----MGKSITISFYEIFQDHVYDLLDPKQQ---- 162 (614)
Q Consensus 92 l~G~N~tI~aYGqTGSGKTyTm~G~~~~~GLipral~~LF~~~~~-----~~~sV~vS~~EIYnE~V~DLL~~~~~---- 162 (614)
++|||+||||||||||||||||+|+ ++||+||++++||+.++. ..+.|+|||+|||||+|||||++...
T Consensus 79 l~G~n~~i~aYGqtgSGKT~T~~G~--~~Giipr~~~~lf~~~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~~ 156 (342)
T d1f9va_ 79 LDGYNVCIFAYGQTGSGKTFTMLNP--GDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKED 156 (342)
T ss_dssp GGTCCEEEEEECCTTSSHHHHHHST--TTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC--------
T ss_pred hcccccceeeeeccCCccccccccC--cCchhHHHHHHHHhhhhhhhccccccceeeeeeeeccCeeEECCCCCCCcccc
Confidence 9999999999999999999999995 689999999999988762 45789999999999999999987542
Q ss_pred -----cceEE-ecCCCceEecCCeEEEcCCHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEEEeeccC---ccccc
Q 035971 163 -----EVQIL-ENGQGKIQLKGLSQVPVKSISEFQKLYISMHNSRKPVQKITMDLPRRSHKGLIVNVSPVSN---FLPTG 233 (614)
Q Consensus 163 -----~l~i~-ed~~~~~~v~gLtev~V~S~ee~~~ll~~g~~~R~~~~t~~n~~SSRSH~if~I~v~~~~~---~~~~s 233 (614)
.+.++ ++..++++|.|++++.|.+.+|++.++..|.++|.+++|.+|..|||||++|+|++...+. ....|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~N~~ssrSh~i~~i~v~~~~~~~~~~~~s 236 (342)
T d1f9va_ 157 TSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAKTGAHSYG 236 (342)
T ss_dssp -----CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC--CCEEEE
T ss_pred ccccceeeeeecCCCCcEEEeeeEEEEecchHHHHHHHhhhhhccccccccccccCcccceeEEEEEEEecCCccceeee
Confidence 13344 4556789999999999999999999999999999999999999999999999999987654 35578
Q ss_pred eeEEEeCCCccccccccCccchhhhhHHhhhhHHHHHHHHHHHhcC---CCCccCCCChhhhhhhhccCCCceEEEEEEc
Q 035971 234 KMNFVDLAGYQDIRRKSTEGSIFVENTKVNKSIYTLFNVVYALNAN---ESHVPYRESKLTRMLQESLGCKSKILMLTCL 310 (614)
Q Consensus 234 kL~fVDLAGsEr~~k~~~~g~~l~E~~~INkSL~aL~~vI~aL~~~---~~~vPyRdSkLTrLLqdsLgGnskt~mI~~v 310 (614)
+|+||||||+|+..+....+.+++|+..||+||.+|++||.+|+++ +.|||||+||||+||+|+||||++|+||+||
T Consensus 237 ~l~~vDLAGse~~~~~~~~~~~~~e~~~iN~Sl~~L~~vi~aL~~~~~~~~~iPyR~SkLT~lL~d~lgg~s~t~~I~~v 316 (342)
T d1f9va_ 237 TLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNI 316 (342)
T ss_dssp EEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEEEEEEEE
T ss_pred eeeeeeccCCcccccccchhhhhhhhhhccHHHHHHHHHHHHHhcccCCCCcCCCccCHHHHHHHHhcCCCceEEEEEEE
Confidence 9999999999999999999999999999999999999999999864 4699999999999999999999999999999
Q ss_pred CcC------chhHHHHHHhHhhhhhc
Q 035971 311 LPR------SVSTTKTQTGSQMHSST 330 (614)
Q Consensus 311 sP~------Tl~TL~~asr~~r~i~n 330 (614)
+|+ |++||+||+|+ +.|+.
T Consensus 317 sp~~~~~~eTl~TL~fa~r~-~~i~~ 341 (342)
T d1f9va_ 317 SPSSSHINETLNSLRFASKV-NSTRL 341 (342)
T ss_dssp CCSGGGHHHHHHHHHHHHHH-CCTTT
T ss_pred CCchhhHHHHHHHHHHHHHh-hccee
Confidence 998 99999999999 87763
No 10
>d2edua1 a.60.2.7 (A:8-98) KIF22, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=4.5e-14 Score=119.43 Aligned_cols=67 Identities=36% Similarity=0.583 Sum_probs=60.8
Q ss_pred hHHHHHhhhccCCHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHHHhhh
Q 035971 544 LVQEYLKLLNTGGKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKKEMEC 611 (614)
Q Consensus 544 l~~~~~~~lN~A~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~~~~~ 611 (614)
-.++.|.+||+|+.+||..|||||+++|++||+||+++ |||++++||.+ .|++++.+++|.+..+-+
T Consensus 19 ~~~~~l~~iNtAs~~eL~~lpgig~~~A~~II~yR~~~-G~f~sledL~~V~Gi~~k~~eki~k~~~l~ 86 (91)
T d2edua1 19 GRQKILDLLNEGSARDLRSLQRIGPKKAQLIVGWRELH-GPFSQVEDLERVEGITGKQMESFLKANILG 86 (91)
T ss_dssp HHHHHHHHHHHSCHHHHHHSTTCCHHHHHHHHHHHHHH-CCCSSGGGGGGSTTCCHHHHHHHHHHHHHH
T ss_pred hhcccccccccCCHHHHhhCCCCCHHHHHHHHHHHHHc-CCCCCHHHHhcCCCCCHHHHHHHHHcCchh
Confidence 35677778999999999999999999999999999999 55999999999 799999999999886644
No 11
>d3bzka1 a.60.2.6 (A:474-563) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.27 E-value=1.5e-12 Score=109.79 Aligned_cols=60 Identities=25% Similarity=0.315 Sum_probs=53.4
Q ss_pred hHHHHHhhhccCCHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHH
Q 035971 544 LVQEYLKLLNTGGKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGM 604 (614)
Q Consensus 544 l~~~~~~~lN~A~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~ 604 (614)
.+...-..||+|+.++|+.+||||+++|++||+||+++ |||++++||.+ .||+++.++++
T Consensus 21 ~v~~vgidiN~As~~~L~~lpGig~~~A~~Iv~~R~~~-G~f~s~edL~~v~gi~~k~~e~i 81 (90)
T d3bzka1 21 CVNAVGVDVNTASAALLARISGLNSTLAQNIVAHRDAN-GAFRTRDELKKVSRLGEKTFEQA 81 (90)
T ss_dssp HHHHHCEETTTCCHHHHTTSTTCCHHHHHHHHHHHHHH-CSCSSSGGGGGSTTCCHHHHHHH
T ss_pred hhhhcceehhhCCHHHHhHCCCCCHHHHHHHHHHHHHc-CCCCCHHHHhhCCCCCHHHHHHh
Confidence 33444456999999999999999999999999999999 56999999999 89999999876
No 12
>d2duya1 a.60.2.7 (A:11-75) Uncharacterized protein TTHA1967 {Thermus thermophilus [TaxId: 274]}
Probab=99.11 E-value=2.3e-11 Score=96.25 Aligned_cols=50 Identities=32% Similarity=0.500 Sum_probs=47.3
Q ss_pred hhhccCCHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHH
Q 035971 550 KLLNTGGKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGM 604 (614)
Q Consensus 550 ~~lN~A~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~ 604 (614)
.+||+|+.++|+.+||||+++|++||+|| +|++++||.+ .|++.+.++++
T Consensus 9 idiNtA~~~eL~~lpgig~~~A~~Iv~~R-----~f~s~edL~~v~gi~~~~~~~i 59 (65)
T d2duya1 9 VSLNEASLEELMALPGIGPVLARRIVEGR-----PYARVEDLLKVKGIGPATLERL 59 (65)
T ss_dssp EETTTCCHHHHTTSTTCCHHHHHHHHHTC-----CCSSGGGGGGSTTCCHHHHHHH
T ss_pred cccccCCHHHHHHCCCCCHHHHHHHHHcC-----CCCCHHHHHhCCCCCHHHHHHH
Confidence 35999999999999999999999999999 5999999999 89999999887
No 13
>d2axtu1 a.60.12.2 (U:37-134) Photosystem II 12 kDa extrinsic protein PsbU {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=98.94 E-value=1.4e-10 Score=98.39 Aligned_cols=52 Identities=19% Similarity=0.350 Sum_probs=46.4
Q ss_pred hhhccCCHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHH
Q 035971 550 KLLNTGGKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMK 606 (614)
Q Consensus 550 ~~lN~A~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~ 606 (614)
..||+|+.++|+.|||||+++|++||+ + |||++++||.+ .||++++++.|-.
T Consensus 19 idlN~As~~eL~~lpGIg~~~A~~Iv~----~-gpf~s~edL~~V~GIg~~~~e~lk~ 71 (98)
T d2axtu1 19 IDLNNTNIAAFIQYRGLYPTLAKLIVK----N-APYESVEDVLNIPGLTERQKQILRE 71 (98)
T ss_dssp EESSSSCGGGGTTSTTCTHHHHHHHHH----S-CCCSSGGGGGGCTTCCTTHHHHHHH
T ss_pred eecccccHHHHHHhhhhcHHHHHHHHH----c-CCcCCHHHHhhCCCCCHHHHHHHHH
Confidence 469999999999999999999999995 4 58999999999 7999988777643
No 14
>d2i5ha1 e.71.1.1 (A:16-195) Hypothetical protein AF1531 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.80 E-value=1.6e-05 Score=73.41 Aligned_cols=61 Identities=25% Similarity=0.483 Sum_probs=46.8
Q ss_pred HHHhhhccCC-----HHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh-cC--CCHH-HHHHHHHHHh
Q 035971 547 EYLKLLNTGG-----KEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD-IG--LSAK-QIKGMMKKEM 609 (614)
Q Consensus 547 ~~~~~lN~A~-----~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~-~g--l~~~-~~~~~~~~~~ 609 (614)
..++|.|.|. .-.|+-|||||.++|..||+.|++. ||.|.+||.+ ++ ..+. .+.+=+-.++
T Consensus 99 ~FV~FfN~A~pit~klH~leLLPGIGkk~~~~iveeR~~~--~f~sf~dl~~rv~~~~~p~~lla~Ri~~Ei 168 (180)
T d2i5ha1 99 KYVDFFNKADSITTRMHQLELLPGVGKKMMWAIIEERKKR--PFESFEDIAQRVKGIQRPEKLIVSRIIYEI 168 (180)
T ss_dssp HHHHHHC--CCBCSSSBGGGGSTTCCHHHHHHHHHHHHHS--CCCSHHHHHHHSTTCCCHHHHHHHHHHHHH
T ss_pred hheeeeecCCccchhhHHHHhcccccHHHHHHHHHHHccC--CCCCHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 4567889998 8999999999999999999999987 7999999987 74 5663 4443333333
No 15
>d2i1qa1 a.60.4.1 (A:5-64) DNA repair protein Rad51, N-terminal domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.66 E-value=0.00099 Score=50.60 Aligned_cols=46 Identities=26% Similarity=0.380 Sum_probs=34.6
Q ss_pred hccCCCCCHHHHHHHHHHH----HhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 560 LKRLKGIGEKRASYILELR----EESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 560 L~~l~gig~~~A~~Ii~~R----~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
|..|||||+++|+++.++- +.. --.++++|.+ .|++.+.+++|+..
T Consensus 1 L~~IpGIG~~~a~~L~~~G~~tv~~l--~~a~~eeL~~i~Gi~~~~A~~i~~~ 51 (60)
T d2i1qa1 1 LTDLPGVGPSTAEKLVEAGYIDFMKI--ATATVGELTDIEGISEKAAAKMIMG 51 (60)
T ss_dssp CTTSTTCCHHHHHHHHHHTCCSHHHH--HTCCHHHHHTSTTCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHccCCCHHHH--HhCCHHHHHHCCCCCHHHHHHHHHH
Confidence 6789999999999998761 111 1235667778 89999999999765
No 16
>d1kfta_ a.60.2.3 (A:) Excinuclease UvrC C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.19 E-value=0.00046 Score=51.80 Aligned_cols=46 Identities=17% Similarity=0.403 Sum_probs=24.4
Q ss_pred hccCCCCCHHHHHHHHHHHHhCCCCCC--CHHhhhh-cCCCHHHHHHHHH
Q 035971 560 LKRLKGIGEKRASYILELREESPEPFK--NLDDLKD-IGLSAKQIKGMMK 606 (614)
Q Consensus 560 L~~l~gig~~~A~~Ii~~R~~~gg~f~--~~~dL~~-~gl~~~~~~~~~~ 606 (614)
|..|||||+++|++++++-..... +. +.+||.+ .|++++.++++..
T Consensus 4 L~~I~gVG~~~a~~L~~~F~s~~~-i~~As~eeL~~v~GIg~~~A~~I~~ 52 (56)
T d1kfta_ 4 LETIEGVGPKRRQMLLKYMGGLQG-LRNASVEEIAKVPGISQGLAEKIFW 52 (56)
T ss_dssp GGGCTTCSSSHHHHHHHHHSCHHH-HHHCCHHHHTTSSSTTSHHHHHHHH
T ss_pred cccCCCccHHHHHHHHHHhCCHHH-HHHhhHHHHHhcCCCCHHHHHHHHH
Confidence 556666666666666665421111 11 4556666 4666666655543
No 17
>d1pzna1 a.60.4.1 (A:35-95) DNA repair protein Rad51, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.11 E-value=0.0019 Score=49.09 Aligned_cols=48 Identities=21% Similarity=0.323 Sum_probs=35.4
Q ss_pred hhccCCCCCHHHHHHHHHHH----HhCCCCCCCHHhhhh-cCCCHHHHHHHHHHH
Q 035971 559 DLKRLKGIGEKRASYILELR----EESPEPFKNLDDLKD-IGLSAKQIKGMMKKE 608 (614)
Q Consensus 559 ~L~~l~gig~~~A~~Ii~~R----~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~~ 608 (614)
.|+.|||||+++|++++++- +.. -..++++|.+ .||+.+.+++|+...
T Consensus 2 ~L~~i~GIG~~~a~~L~~~g~~sv~~l--~~a~~~eL~~i~Gi~~~~A~~i~~~a 54 (61)
T d1pzna1 2 SIEDLPGVGPATAEKLREAGYDTLEAI--AVASPIELKEVAGISEGTALKIIQAA 54 (61)
T ss_dssp CSSCCTTCCHHHHHHHHTTTCCSHHHH--HTCCHHHHHHHHCCCHHHHHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHhcCCCHHHH--HhCCHHHHHHCCCCCHHHHHHHHHHH
Confidence 58899999999999998642 111 1234566667 899999999998754
No 18
>d1kfta_ a.60.2.3 (A:) Excinuclease UvrC C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.00 E-value=0.0014 Score=49.03 Aligned_cols=39 Identities=21% Similarity=0.265 Sum_probs=30.2
Q ss_pred cchhhhHHHH--HhhhccCCHHhhccCCCCCHHHHHHHHHH
Q 035971 539 GMKNSLVQEY--LKLLNTGGKEDLKRLKGIGEKRASYILEL 577 (614)
Q Consensus 539 ~~~~~l~~~~--~~~lN~A~~~~L~~l~gig~~~A~~Ii~~ 577 (614)
...+.|++.+ +..|-.|+.+||..++|||+++|+.|.+|
T Consensus 13 ~~a~~L~~~F~s~~~i~~As~eeL~~v~GIg~~~A~~I~~~ 53 (56)
T d1kfta_ 13 KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWS 53 (56)
T ss_dssp SHHHHHHHHHSCHHHHHHCCHHHHTTSSSTTSHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHhhHHHHHhcCCCCHHHHHHHHHH
Confidence 3344444443 34577899999999999999999999987
No 19
>d1x2ia1 a.60.2.5 (A:2-69) ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.92 E-value=0.001 Score=51.79 Aligned_cols=48 Identities=15% Similarity=0.131 Sum_probs=34.0
Q ss_pred hhccCCCCCHHHHHHHHHHHHhCCC-CCCCHHhhhh-cCCCHHHHHHHHH
Q 035971 559 DLKRLKGIGEKRASYILELREESPE-PFKNLDDLKD-IGLSAKQIKGMMK 606 (614)
Q Consensus 559 ~L~~l~gig~~~A~~Ii~~R~~~gg-~f~~~~dL~~-~gl~~~~~~~~~~ 606 (614)
-|..|||||++.|++|+++...... .-.+.+||.+ .||+++.++.+..
T Consensus 11 ~L~~I~gIG~~~a~~L~~~f~s~~~i~~As~eeL~~i~GIG~~~A~~I~~ 60 (68)
T d1x2ia1 11 IVEGLPHVSATLARRLLKHFGSVERVFTASVAELMKVEGIGEKIAKEIRR 60 (68)
T ss_dssp HHTTSTTCCHHHHHHHHHHHCSHHHHHHCCHHHHTTSTTCCHHHHHHHHH
T ss_pred HHcCCCCcCHHHHHHHHHHcCCHHHHHHhHHHHHHhCCCcCHHHHHHHHH
Confidence 4678888888888888887642211 1237888888 7888888877754
No 20
>d2bgwa1 a.60.2.5 (A:160-229) DNA repair endonuclease XPF {Aeropyrum pernix [TaxId: 56636]}
Probab=95.76 E-value=0.0023 Score=49.88 Aligned_cols=47 Identities=23% Similarity=0.320 Sum_probs=33.8
Q ss_pred hccCCCCCHHHHHHHHHHHHhCCC-CCCCHHhhhh-cCCCHHHHHHHHH
Q 035971 560 LKRLKGIGEKRASYILELREESPE-PFKNLDDLKD-IGLSAKQIKGMMK 606 (614)
Q Consensus 560 L~~l~gig~~~A~~Ii~~R~~~gg-~f~~~~dL~~-~gl~~~~~~~~~~ 606 (614)
|..|||||++.|++|+++-..... --.+.++|.+ .|++.+.++.+..
T Consensus 15 L~~IpgIG~~~a~~L~~~F~s~~~l~~As~eeL~~v~GIG~~~A~~I~~ 63 (70)
T d2bgwa1 15 LQSFPGIGRRTAERILERFGSLERFFTASKAEISKVEGIGEKRAEEIKK 63 (70)
T ss_dssp HHTSTTCCHHHHHHHHHHHSSHHHHTTCCHHHHHHSTTCCHHHHHHHHH
T ss_pred HcCCCCcCHHHHHHHHHHhCCHHHHHHcCHHHHHcCCCCCHHHHHHHHH
Confidence 668999999999999987532211 0236888888 7899888777654
No 21
>d1bvsa2 a.60.2.1 (A:64-134) DNA helicase RuvA subunit, middle domain {Mycobacterium leprae [TaxId: 1769]}
Probab=95.17 E-value=0.0073 Score=47.22 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=26.0
Q ss_pred HHHHHhhhccCCHHhhccCCCCCHHHHHHHHH
Q 035971 545 VQEYLKLLNTGGKEDLKRLKGIGEKRASYILE 576 (614)
Q Consensus 545 ~~~~~~~lN~A~~~~L~~l~gig~~~A~~Ii~ 576 (614)
..+....|...+.+.|.++||||+++|++||-
T Consensus 31 ~~~l~~aI~~~D~~~L~~vpGIG~KtA~rIi~ 62 (71)
T d1bvsa2 31 AAALRQALADSDVASLTRVPGIGRRGAERIVL 62 (71)
T ss_dssp HHHHHHHTTTTCHHHHHTSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHhhcCCCCCHHHHHHHHH
Confidence 45666778888888899999999999988863
No 22
>d1x2ia1 a.60.2.5 (A:2-69) ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.04 E-value=0.0063 Score=47.06 Aligned_cols=40 Identities=25% Similarity=0.398 Sum_probs=32.2
Q ss_pred hhhhHHHH--HhhhccCCHHhhccCCCCCHHHHHHHHHHHHh
Q 035971 541 KNSLVQEY--LKLLNTGGKEDLKRLKGIGEKRASYILELREE 580 (614)
Q Consensus 541 ~~~l~~~~--~~~lN~A~~~~L~~l~gig~~~A~~Ii~~R~~ 580 (614)
.+.|++.+ +..|-.|+.+||..|+|||+++|+.|.++-..
T Consensus 23 a~~L~~~f~s~~~i~~As~eeL~~i~GIG~~~A~~I~~~~~~ 64 (68)
T d1x2ia1 23 ARRLLKHFGSVERVFTASVAELMKVEGIGEKIAKEIRRVITA 64 (68)
T ss_dssp HHHHHHHHCSHHHHHHCCHHHHTTSTTCCHHHHHHHHHHHHS
T ss_pred HHHHHHHcCCHHHHHHhHHHHHHhCCCcCHHHHHHHHHHHhc
Confidence 34455555 45677899999999999999999999998853
No 23
>d2bcqa2 a.60.12.1 (A:329-385) DNA polymerase lambda {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.79 E-value=0.017 Score=43.06 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=31.9
Q ss_pred HhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHH
Q 035971 558 EDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD-IGLSAKQIK 602 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~ 602 (614)
..+..|.||||++|+..++ . | +++++||.+ ..|+..|.-
T Consensus 8 ~~ft~I~GvGp~~A~~l~~----~-G-i~ti~dLr~~~~Ln~~Q~i 47 (57)
T d2bcqa2 8 ELFSNIWGAGTKTAQMWYQ----Q-G-FRSLEDIRSQASLTTQQAI 47 (57)
T ss_dssp HHHHTSTTCCHHHHHHHHH----T-T-CCSHHHHHHHCCCCHHHHH
T ss_pred HHHhccccccHHHHHHHHH----h-C-CCCHHHHHhcCCCCHHHHH
Confidence 4578899999999999874 2 5 999999998 778776643
No 24
>d2fmpa2 a.60.12.1 (A:92-148) DNA polymerase beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.73 E-value=0.011 Score=44.25 Aligned_cols=40 Identities=30% Similarity=0.418 Sum_probs=31.9
Q ss_pred CHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh--cCCCHHHH
Q 035971 556 GKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD--IGLSAKQI 601 (614)
Q Consensus 556 ~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~--~gl~~~~~ 601 (614)
+.+.|+.|.||||++|+..++ . | |++++||.+ ..|+..|.
T Consensus 5 ~l~~l~~I~GvGp~~A~~l~~----~-G-i~ti~dLr~~~~~Lt~~Q~ 46 (57)
T d2fmpa2 5 SINFLTRVSGIGPSAARKFVD----E-G-IKTLEDLRKNEDKLNHHQR 46 (57)
T ss_dssp HHHHHTTSTTCCHHHHHHHHH----T-T-CCSHHHHHTCGGGSCHHHH
T ss_pred HHHHHhccccccHHHHHHHHH----h-C-CCCHHHHHhhhhhCCHHHH
Confidence 356889999999999999963 2 5 999999976 44776664
No 25
>d2bgwa1 a.60.2.5 (A:160-229) DNA repair endonuclease XPF {Aeropyrum pernix [TaxId: 56636]}
Probab=94.64 E-value=0.013 Score=45.44 Aligned_cols=32 Identities=34% Similarity=0.522 Sum_probs=27.8
Q ss_pred HhhhccCCHHhhccCCCCCHHHHHHHHHHHHh
Q 035971 549 LKLLNTGGKEDLKRLKGIGEKRASYILELREE 580 (614)
Q Consensus 549 ~~~lN~A~~~~L~~l~gig~~~A~~Ii~~R~~ 580 (614)
+..|-.|+.++|..|+|||+++|+.|.+|=+.
T Consensus 36 ~~~l~~As~eeL~~v~GIG~~~A~~I~~~~~~ 67 (70)
T d2bgwa1 36 LERFFTASKAEISKVEGIGEKRAEEIKKILMT 67 (70)
T ss_dssp HHHHTTCCHHHHHHSTTCCHHHHHHHHHHHHS
T ss_pred HHHHHHcCHHHHHcCCCCCHHHHHHHHHHHhC
Confidence 34566799999999999999999999999753
No 26
>d1bvsa2 a.60.2.1 (A:64-134) DNA helicase RuvA subunit, middle domain {Mycobacterium leprae [TaxId: 1769]}
Probab=94.47 E-value=0.034 Score=43.25 Aligned_cols=48 Identities=17% Similarity=0.279 Sum_probs=38.9
Q ss_pred HhhccCCCCCHHHHHHHHHH------HHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 558 EDLKRLKGIGEKRASYILEL------REESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~------R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
+.|.+++||||++|-+|+.. .+.. -=.++.-|.. .|++.|.+++++-.
T Consensus 9 ~~Li~V~GIGpK~Al~iLs~~~~~~l~~aI--~~~D~~~L~~vpGIG~KtA~rIi~e 63 (71)
T d1bvsa2 9 LALLSVSGVGPRLAMATLAVHDAAALRQAL--ADSDVASLTRVPGIGRRGAERIVLE 63 (71)
T ss_dssp HHHHTSSSCCHHHHHHHHHHSCHHHHHHHT--TTTCHHHHHTSTTCCHHHHHHHHHH
T ss_pred HHHhccCCcCHHHHHHHHHhCCHHHHHHHH--HcCCHHHhhcCCCCCHHHHHHHHHH
Confidence 46889999999999999965 3333 2358888999 99999999999743
No 27
>d1ixra1 a.60.2.1 (A:63-135) DNA helicase RuvA subunit, middle domain {Thermus thermophilus [TaxId: 274]}
Probab=94.34 E-value=0.015 Score=45.55 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=26.3
Q ss_pred HHHHHhhhccCCHHhhccCCCCCHHHHHHHHH
Q 035971 545 VQEYLKLLNTGGKEDLKRLKGIGEKRASYILE 576 (614)
Q Consensus 545 ~~~~~~~lN~A~~~~L~~l~gig~~~A~~Ii~ 576 (614)
..+...-|-..+.+.|.++||||+++|++||-
T Consensus 32 ~~~l~~aI~~~D~~~L~~vpGIG~KtA~rIi~ 63 (73)
T d1ixra1 32 PRLLARALLEGDARLLTSASGVGRRLAERIAL 63 (73)
T ss_dssp HHHHHHHHHTTCHHHHTTSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHhhcCCCCCHHHHHHHHH
Confidence 34666677888999999999999999988873
No 28
>d1jmsa3 a.60.12.1 (A:243-302) Terminal deoxynucleotidyl transferase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.14 E-value=0.022 Score=42.88 Aligned_cols=39 Identities=18% Similarity=0.236 Sum_probs=31.2
Q ss_pred HHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhc---CCCHHHH
Q 035971 557 KEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKDI---GLSAKQI 601 (614)
Q Consensus 557 ~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~---gl~~~~~ 601 (614)
..+|+.|.||||++|++.++ . | |++++||.+. -|+..|.
T Consensus 7 l~~f~~I~GvGp~~A~~l~~----~-G-i~ti~dL~~~~~~~Lt~~Q~ 48 (60)
T d1jmsa3 7 FKLFTSVFGVGLKTAEKWFR----M-G-FRTLSKIQSDKSLRFTQMQK 48 (60)
T ss_dssp HHHHHTSTTCCHHHHHHHHH----T-T-CCSHHHHHHCSSCCCCHHHH
T ss_pred HHHHhccccccHHHHHHHHH----h-C-CCCHHHHHhcCcccCCHHHH
Confidence 46789999999999999873 2 5 9999999872 3677664
No 29
>d1cuka2 a.60.2.1 (A:65-142) DNA helicase RuvA subunit, middle domain {Escherichia coli [TaxId: 562]}
Probab=93.52 E-value=0.025 Score=44.91 Aligned_cols=35 Identities=26% Similarity=0.547 Sum_probs=26.2
Q ss_pred HHHHhhhccCCHHhhccCCCCCHHHHHHHH-HHHHh
Q 035971 546 QEYLKLLNTGGKEDLKRLKGIGEKRASYIL-ELREE 580 (614)
Q Consensus 546 ~~~~~~lN~A~~~~L~~l~gig~~~A~~Ii-~~R~~ 580 (614)
++...-|-..+.+.|..+||||+++|++|| +.+.+
T Consensus 32 ~~l~~aI~~~D~~~L~~vpGIG~KtA~rIi~eLk~K 67 (78)
T d1cuka2 32 QQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDR 67 (78)
T ss_dssp HHHHHHHHTTCHHHHHTSTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence 555666777888888899999999998886 34443
No 30
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=93.24 E-value=0.017 Score=54.10 Aligned_cols=49 Identities=31% Similarity=0.464 Sum_probs=34.2
Q ss_pred eeEeeeeecCCCChHHHHhhhhHHHHHHHhcCCceEEEeeccCCCCcceEee
Q 035971 63 CYKLDYCYEQNEGNGIIFAREVKPLISEVFNGINATIVACGAKGSGKTRVIQ 114 (614)
Q Consensus 63 ~F~FD~VF~~~asQ~eVf~~~v~plV~~vl~G~N~tI~aYGqTGSGKTyTm~ 114 (614)
.|+||..|- ..+++..|. .+..+++..-.++|. ++-||++|+||||.+.
T Consensus 6 ~~tFdnF~v-g~~N~~a~~-~~~~~~~~~~~~~n~-l~l~G~~G~GKTHLl~ 54 (213)
T d1l8qa2 6 KYTLENFIV-GEGNRLAYE-VVKEALENLGSLYNP-IFIYGSVGTGKTHLLQ 54 (213)
T ss_dssp TCCSSSCCC-CTTTHHHHH-HHHHHHHTTTTSCSS-EEEECSSSSSHHHHHH
T ss_pred CCChhhccC-CCcHHHHHH-HHHHHHhCcCCCCCc-EEEECCCCCcHHHHHH
Confidence 588887664 344666675 555666554444554 8899999999999874
No 31
>d1cuka2 a.60.2.1 (A:65-142) DNA helicase RuvA subunit, middle domain {Escherichia coli [TaxId: 562]}
Probab=93.06 E-value=0.045 Score=43.33 Aligned_cols=49 Identities=20% Similarity=0.271 Sum_probs=38.3
Q ss_pred HhhccCCCCCHHHHHHHHHH------HHhCCCCCCCHHhhhh-cCCCHHHHHHHHHHH
Q 035971 558 EDLKRLKGIGEKRASYILEL------REESPEPFKNLDDLKD-IGLSAKQIKGMMKKE 608 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~------R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~~ 608 (614)
+.|.+++||||++|-+|+.. ++.. --.++.-|.. .|++.|.+++++-..
T Consensus 9 ~~Li~V~GIGpK~Al~iLs~~~~~~l~~aI--~~~D~~~L~~vpGIG~KtA~rIi~eL 64 (78)
T d1cuka2 9 KELIKTNGVGPKLALAILSGMSAQQFVNAV--EREEVGALVKLPGIGKKTAERLIVEM 64 (78)
T ss_dssp HHHHHSSSCCHHHHHHHHHHSCHHHHHHHH--HTTCHHHHHTSTTCCHHHHHHHHHHH
T ss_pred HHHHccCCccHHHHHHHHHhCCHHHHHHHH--HccCHHHhhcCCCCCHHHHHHHHHHH
Confidence 56889999999999999964 2222 1247888888 999999999997543
No 32
>d2a1ja1 a.60.2.5 (A:837-898) DNA repair endonuclease XPF {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.87 E-value=0.058 Score=40.54 Aligned_cols=39 Identities=26% Similarity=0.478 Sum_probs=26.6
Q ss_pred HhhccCCCCCHHHHHHHHHHHHhCCCCCCC--------HHhhhh-cCCCHHHHHHH
Q 035971 558 EDLKRLKGIGEKRASYILELREESPEPFKN--------LDDLKD-IGLSAKQIKGM 604 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~--------~~dL~~-~gl~~~~~~~~ 604 (614)
+=|..|||||++.+++++++ |++ +++|.+ .| +.+.++.+
T Consensus 3 d~L~~iPGIg~~~~~~Ll~~-------f~Si~~l~~As~~eL~~v~G-~~~~A~~i 50 (62)
T d2a1ja1 3 DFLLKMPGVNAKNCRSLMHH-------VKNIAELAALSQDELTSILG-NAANAKQL 50 (62)
T ss_dssp HHHHTSTTCCHHHHHHHHHH-------CSSHHHHHTCCHHHHHHHHS-CHHHHHHH
T ss_pred hHHhcCCCCCHHHHHHHHHH-------hccHHHHHhCCHHHHHHCcC-cHHHHHHH
Confidence 44788999999999999852 544 455555 55 55544444
No 33
>d1ixra1 a.60.2.1 (A:63-135) DNA helicase RuvA subunit, middle domain {Thermus thermophilus [TaxId: 274]}
Probab=92.79 E-value=0.059 Score=42.08 Aligned_cols=48 Identities=19% Similarity=0.166 Sum_probs=37.9
Q ss_pred HhhccCCCCCHHHHHHHHHH------HHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 558 EDLKRLKGIGEKRASYILEL------REESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~------R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
..|.+++|||+++|-+|+.. .+.. -=.+..-|.+ -|++.|.+++++-.
T Consensus 10 ~~Li~V~GIGpk~Al~iLs~~~~~~l~~aI--~~~D~~~L~~vpGIG~KtA~rIi~e 64 (73)
T d1ixra1 10 ELLLSVSGVGPKVALALLSALPPRLLARAL--LEGDARLLTSASGVGRRLAERIALE 64 (73)
T ss_dssp HHHHSSSCCCHHHHHHHHHHSCHHHHHHHH--HTTCHHHHTTSTTCCHHHHHHHHHH
T ss_pred HHHhccCCcCHHHHHHHHHHccHHHHHHHH--HhcCHHHhhcCCCCCHHHHHHHHHH
Confidence 46889999999999999964 2222 1247888988 99999999999754
No 34
>d2a1jb1 a.60.2.5 (B:219-296) DNA excision repair protein ERCC-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.96 E-value=0.036 Score=43.69 Aligned_cols=25 Identities=24% Similarity=0.521 Sum_probs=20.0
Q ss_pred cCCHHhhccCCCCCHHHHHHHHHHH
Q 035971 554 TGGKEDLKRLKGIGEKRASYILELR 578 (614)
Q Consensus 554 ~A~~~~L~~l~gig~~~A~~Ii~~R 578 (614)
.|+.+||..++|||+++|+.|.++=
T Consensus 47 ~A~~eeL~~i~GiG~~~A~~i~~~f 71 (78)
T d2a1jb1 47 AASREDLALCPGLGPQKARRLFDVL 71 (78)
T ss_dssp SCCHHHHHTSSSCCSHHHHHHHHHH
T ss_pred hhhHHHHHHhhhhhHHHHHHHHHHH
Confidence 5788888888888888888887765
No 35
>d2i1qa1 a.60.4.1 (A:5-64) DNA repair protein Rad51, N-terminal domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=91.79 E-value=0.054 Score=40.56 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=24.4
Q ss_pred hhccCCHHhhccCCCCCHHHHHHHHHH
Q 035971 551 LLNTGGKEDLKRLKGIGEKRASYILEL 577 (614)
Q Consensus 551 ~lN~A~~~~L~~l~gig~~~A~~Ii~~ 577 (614)
.|=.|+.++|..++|||+++|++|++.
T Consensus 25 ~l~~a~~eeL~~i~Gi~~~~A~~i~~~ 51 (60)
T d2i1qa1 25 KIATATVGELTDIEGISEKAAAKMIMG 51 (60)
T ss_dssp HHHTCCHHHHHTSTTCCHHHHHHHHHH
T ss_pred HHHhCCHHHHHHCCCCCHHHHHHHHHH
Confidence 355799999999999999999999886
No 36
>d2fmpa1 a.60.6.1 (A:10-91) DNA polymerase beta, N-terminal (8 kD)-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.04 E-value=0.06 Score=42.83 Aligned_cols=37 Identities=24% Similarity=0.440 Sum_probs=31.6
Q ss_pred CCHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 555 GGKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 555 A~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
.+.++|..|||||+.+|+.|-++=+.. .+.-+++|.+
T Consensus 45 ~~~~~l~~i~GIGk~ia~kI~E~~~TG--~~~~le~l~~ 81 (82)
T d2fmpa1 45 KSGAEAKKLPGVGTKIAEKIDEFLATG--KLRKLEKIRQ 81 (82)
T ss_dssp CCHHHHHTSTTCCHHHHHHHHHHHHHS--SCHHHHHHHH
T ss_pred CCHHHHhcCCCccHHHHHHHHHHHHhC--ChHHHHHHhc
Confidence 467899999999999999999998764 5888888764
No 37
>d1jmsa1 a.60.6.1 (A:148-242) Terminal deoxynucleotidyl transferase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.86 E-value=0.063 Score=43.95 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=31.6
Q ss_pred CCHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 555 GGKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 555 A~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
.+.++|..|||||+.+|+.|-++=+.+ .+..+|+|.+
T Consensus 59 ~~~~~l~~i~GIGk~i~~kI~Eil~tG--~~~~lE~l~n 95 (95)
T d1jmsa1 59 TSMKDTEGIPCLGDKVKSIIEGIIEDG--ESSEAKAVLN 95 (95)
T ss_dssp CSGGGGTTCSSCCHHHHHHHHHHHHHS--SCHHHHHHHH
T ss_pred CCHHHHHhccchhHHHHHHHHHHHHHC--CcHHHHHhhC
Confidence 466899999999999999999999765 5888888753
No 38
>d1pzna1 a.60.4.1 (A:35-95) DNA repair protein Rad51, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.52 E-value=0.049 Score=40.90 Aligned_cols=28 Identities=25% Similarity=0.366 Sum_probs=24.7
Q ss_pred hhhccCCHHhhccCCCCCHHHHHHHHHH
Q 035971 550 KLLNTGGKEDLKRLKGIGEKRASYILEL 577 (614)
Q Consensus 550 ~~lN~A~~~~L~~l~gig~~~A~~Ii~~ 577 (614)
..|=.|+.++|..++|||+++|+.|++.
T Consensus 26 ~~l~~a~~~eL~~i~Gi~~~~A~~i~~~ 53 (61)
T d1pzna1 26 EAIAVASPIELKEVAGISEGTALKIIQA 53 (61)
T ss_dssp HHHHTCCHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHCCCCCHHHHHHHHHH
Confidence 3455799999999999999999999975
No 39
>d1dgsa1 a.60.2.2 (A:401-581) NAD+-dependent DNA ligase, domain 3 {Thermus filiformis [TaxId: 276]}
Probab=90.24 E-value=0.08 Score=48.36 Aligned_cols=48 Identities=27% Similarity=0.299 Sum_probs=35.4
Q ss_pred hhhccCCHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCH
Q 035971 550 KLLNTGGKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKDIGLSA 598 (614)
Q Consensus 550 ~~lN~A~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~ 598 (614)
..|-.|+.++|..|+|||+++|+.|++|=... ..-.-+++|.+.|++.
T Consensus 131 ~~l~~as~eeL~~I~GIG~~~A~si~~ff~~~-~n~~~i~~L~~~Gv~~ 178 (181)
T d1dgsa1 131 DRLLEASLEELIEVEEVGELTARAILETLKDP-AFRDLVRRLKEAGVSM 178 (181)
T ss_dssp HHHTTCCHHHHHTSTTCCHHHHHHHHHHHHCH-HHHHHHHHHHHTTCCC
T ss_pred hhhhhhHHHHHhhcCCcCHHHHHHHHHHHCCH-HHHHHHHHHHHcCCCc
Confidence 34557899999999999999999999984311 0124577777777753
No 40
>d1szpa1 a.60.4.1 (A:81-144) DNA repair protein Rad51, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.59 E-value=0.079 Score=40.23 Aligned_cols=27 Identities=30% Similarity=0.463 Sum_probs=23.9
Q ss_pred hccCCHHhhccCCCCCHHHHHHHHHHH
Q 035971 552 LNTGGKEDLKRLKGIGEKRASYILELR 578 (614)
Q Consensus 552 lN~A~~~~L~~l~gig~~~A~~Ii~~R 578 (614)
|=.|+.++|..++|||+++|++|++.=
T Consensus 30 ia~~t~~~L~~i~Gi~e~~a~KIi~~A 56 (64)
T d1szpa1 30 VAYAPRKDLLEIKGISEAKADKLLNEA 56 (64)
T ss_dssp HHHSCSHHHHTSTTCCHHHHHHHHHHH
T ss_pred HHhCCHHHHHHcCCCCHHHHHHHHHHH
Confidence 446899999999999999999999753
No 41
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.29 E-value=0.066 Score=51.49 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=38.4
Q ss_pred eeEeeeeecCCCChHHHHhhhhHHHHH-HHhc--C--CceEEEeeccCCCCcceEe
Q 035971 63 CYKLDYCYEQNEGNGIIFAREVKPLIS-EVFN--G--INATIVACGAKGSGKTRVI 113 (614)
Q Consensus 63 ~F~FD~VF~~~asQ~eVf~~~v~plV~-~vl~--G--~N~tI~aYGqTGSGKTyTm 113 (614)
.++||.|.+.+.--+++.+.+..|+.. ..+. | +...|+-||++|+|||+..
T Consensus 3 ~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~ 58 (265)
T d1r7ra3 3 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 58 (265)
T ss_dssp CCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHH
T ss_pred CCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHH
Confidence 467999999988888888877666652 3333 2 3467999999999999653
No 42
>d2bcqa1 a.60.6.1 (A:252-327) DNA polymerase lambda {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.80 E-value=0.13 Score=40.04 Aligned_cols=31 Identities=26% Similarity=0.476 Sum_probs=25.5
Q ss_pred CHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCH
Q 035971 556 GKEDLKRLKGIGEKRASYILELREESPEPFKNL 588 (614)
Q Consensus 556 ~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~ 588 (614)
+.++|..|||||+++|+.|.++-+.. .+.-+
T Consensus 44 ~~~~l~~lpGiG~~i~~kI~Eil~tG--~l~~l 74 (76)
T d2bcqa1 44 SYQEACSIPGIGKRMAEKIIEILESG--HLRKL 74 (76)
T ss_dssp CHHHHHTSTTCCHHHHHHHHHHHHSS--SCGGG
T ss_pred CHHHHhcCCCccHHHHHHHHHHHHhC--ccHhh
Confidence 46789999999999999999999764 35444
No 43
>d2a1jb1 a.60.2.5 (B:219-296) DNA excision repair protein ERCC-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.38 E-value=0.12 Score=40.51 Aligned_cols=48 Identities=17% Similarity=0.273 Sum_probs=35.0
Q ss_pred HhhccCCCCCHHHHHHHHHHHHhCCCCC--CCHHhhhh-cCCCHHHHHHHHH
Q 035971 558 EDLKRLKGIGEKRASYILELREESPEPF--KNLDDLKD-IGLSAKQIKGMMK 606 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~~gg~f--~~~~dL~~-~gl~~~~~~~~~~ 606 (614)
..|..|||||++.|++++++=..... + .+.++|.+ -||+.+.++.|..
T Consensus 19 ~~L~~I~gIg~~~a~~L~~~F~s~~~-i~~A~~eeL~~i~GiG~~~A~~i~~ 69 (78)
T d2a1jb1 19 ECLTTVKSVNKTDSQTLLTTFGSLEQ-LIAASREDLALCPGLGPQKARRLFD 69 (78)
T ss_dssp HHHTTSTTCCHHHHHHHHHHHSSHHH-HHSCCHHHHHTSSSCCSHHHHHHHH
T ss_pred HHhcCCCCcCHHHHHHHHHHhCCcHH-HHhhhHHHHHHhhhhhHHHHHHHHH
Confidence 45778999999999999974210000 1 35788888 8999998888765
No 44
>d1keaa_ a.96.1.2 (A:) Thymine-DNA glycosylase {Archaeon Methanobacterium thermoformicicum [TaxId: 145262]}
Probab=87.88 E-value=0.12 Score=48.43 Aligned_cols=26 Identities=15% Similarity=0.308 Sum_probs=23.0
Q ss_pred cCCHHhhccCCCCCHHHHHHHHHHHH
Q 035971 554 TGGKEDLKRLKGIGEKRASYILELRE 579 (614)
Q Consensus 554 ~A~~~~L~~l~gig~~~A~~Ii~~R~ 579 (614)
-.+.++|++|||||++.|..|+.+--
T Consensus 109 p~~~~~L~~LpGVG~kTA~~il~~~~ 134 (217)
T d1keaa_ 109 PRNRKAILDLPGVGKYTCAAVMCLAF 134 (217)
T ss_dssp CSCHHHHHTSTTCCHHHHHHHHHHTT
T ss_pred chhhHHHHHHHhhhhhhhHHHHHHhc
Confidence 35689999999999999999999853
No 45
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=87.26 E-value=0.24 Score=45.91 Aligned_cols=57 Identities=16% Similarity=0.279 Sum_probs=32.4
Q ss_pred HhhhhHHHHHHHhcCCce-----EEEeeccCCCCcceEeecCCCCcchhHHHHHHHHhhccccCceEEEEEE
Q 035971 80 FAREVKPLISEVFNGINA-----TIVACGAKGSGKTRVIQGSYEEPGLAALAVDEILSISEKMGKSITISFY 146 (614)
Q Consensus 80 f~~~v~plV~~vl~G~N~-----tI~aYGqTGSGKTyTm~G~~~~~GLipral~~LF~~~~~~~~sV~vS~~ 146 (614)
++....-+...+.+|... .++.||++|+|||+++ -.+++.|..........+.+.|+
T Consensus 25 ~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~----------~~l~~~l~~~~~~~~~~~~~~~~ 86 (287)
T d1w5sa2 25 AEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLA----------KFTVKRVSEAAAKEGLTVKQAYV 86 (287)
T ss_dssp HHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHH----------HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHH----------HHHHHHHHhhcccccCCceeeee
Confidence 333333344556665533 4677899999999765 33555565544444433444433
No 46
>d1orna_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=86.64 E-value=0.16 Score=47.26 Aligned_cols=28 Identities=21% Similarity=0.459 Sum_probs=23.8
Q ss_pred cCCHHhhccCCCCCHHHHHHHHHHHHhC
Q 035971 554 TGGKEDLKRLKGIGEKRASYILELREES 581 (614)
Q Consensus 554 ~A~~~~L~~l~gig~~~A~~Ii~~R~~~ 581 (614)
..+.++|.+|||||++.|..|+-+=-..
T Consensus 106 p~~~~~L~~LpGVG~kTA~~il~~a~~~ 133 (214)
T d1orna_ 106 PRDRDELMKLPGVGRKTANVVVSVAFGV 133 (214)
T ss_dssp CSCHHHHTTSTTCCHHHHHHHHHHHHCC
T ss_pred CCCHHHHHhCcCcccchHHHHHHHHhcC
Confidence 4478999999999999999999875444
No 47
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=85.92 E-value=0.14 Score=47.67 Aligned_cols=30 Identities=30% Similarity=0.510 Sum_probs=21.6
Q ss_pred hhHHHHHHHhcCCce-----EEEeeccCCCCcceE
Q 035971 83 EVKPLISEVFNGINA-----TIVACGAKGSGKTRV 112 (614)
Q Consensus 83 ~v~plV~~vl~G~N~-----tI~aYGqTGSGKTyT 112 (614)
.+...+..++.|... .|+.||++|+|||++
T Consensus 14 ~~~~~~~~~~~~~~~~~~P~~ilL~GpPGtGKT~l 48 (273)
T d1gvnb_ 14 RLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSL 48 (273)
T ss_dssp HHHHHHHHHHTTCCCCSSCEEEEEECCTTSCTHHH
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEECCCCCCHHHH
Confidence 444555556665555 499999999999974
No 48
>d1kg2a_ a.96.1.2 (A:) Catalytic domain of MutY {Escherichia coli [TaxId: 562]}
Probab=85.78 E-value=0.18 Score=47.25 Aligned_cols=28 Identities=29% Similarity=0.372 Sum_probs=24.0
Q ss_pred cCCHHhhccCCCCCHHHHHHHHHHHHhC
Q 035971 554 TGGKEDLKRLKGIGEKRASYILELREES 581 (614)
Q Consensus 554 ~A~~~~L~~l~gig~~~A~~Ii~~R~~~ 581 (614)
-.+.++|++|||||++.|..|+.+=-..
T Consensus 105 p~~~~~L~~LpGVG~kTA~~il~~a~~~ 132 (224)
T d1kg2a_ 105 PETFEEVAALPGVGRSTAGAILSLSLGK 132 (224)
T ss_dssp CCSHHHHHTSTTCCHHHHHHHHHHHHCC
T ss_pred chHHHHHHHHHhhhhhhhHHHHHHhhhc
Confidence 5678999999999999999999875433
No 49
>d1rrqa1 a.96.1.2 (A:9-229) Catalytic domain of MutY {Bacillus stearothermophilus [TaxId: 1422]}
Probab=85.73 E-value=0.19 Score=47.00 Aligned_cols=28 Identities=25% Similarity=0.443 Sum_probs=24.3
Q ss_pred cCCHHhhccCCCCCHHHHHHHHHHHHhC
Q 035971 554 TGGKEDLKRLKGIGEKRASYILELREES 581 (614)
Q Consensus 554 ~A~~~~L~~l~gig~~~A~~Ii~~R~~~ 581 (614)
..+.++|++|||||++.|..|+.+=-..
T Consensus 103 p~~~~~Ll~LpGIG~kTA~~il~~a~~~ 130 (221)
T d1rrqa1 103 PDDPDEFSRLKGVGPYTVGAVLSLAYGV 130 (221)
T ss_dssp CCSHHHHHTSTTCCHHHHHHHHHHHTCC
T ss_pred chHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 6788999999999999999999885433
No 50
>d2abka_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=85.06 E-value=0.19 Score=46.72 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=25.5
Q ss_pred cCCHHhhccCCCCCHHHHHHHHHHHHhCCC
Q 035971 554 TGGKEDLKRLKGIGEKRASYILELREESPE 583 (614)
Q Consensus 554 ~A~~~~L~~l~gig~~~A~~Ii~~R~~~gg 583 (614)
.-+.++|++|||||++.|..|+-|--....
T Consensus 105 p~~~~~L~~LpGVG~~TA~~Il~~a~~~p~ 134 (211)
T d2abka_ 105 PEDRAALEALPGVGRKTANVVLNTAFGWPT 134 (211)
T ss_dssp CSCHHHHHHSTTCCHHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHhhchHHHHHHHHHHhcCcc
Confidence 356899999999999999999998765533
No 51
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=83.34 E-value=0.19 Score=47.63 Aligned_cols=49 Identities=16% Similarity=0.211 Sum_probs=32.0
Q ss_pred eEeeeeecCCCChHHHHhhhhHHHHHHHhcCCc---eEEEeeccCCCCcceEe
Q 035971 64 YKLDYCYEQNEGNGIIFAREVKPLISEVFNGIN---ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 64 F~FD~VF~~~asQ~eVf~~~v~plV~~vl~G~N---~tI~aYGqTGSGKTyTm 113 (614)
|-.+++++....-+.|.+ .+..+++.+..+.+ .+|+-||++|+|||+..
T Consensus 6 ~~~~~~i~~~~~i~~i~~-~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la 57 (246)
T d1d2na_ 6 YIMNGIIKWGDPVTRVLD-DGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALA 57 (246)
T ss_dssp TCTTCCCCCSHHHHHHHH-HHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHH
T ss_pred hhccCCcCcCHHHHHHHH-HHHHHHHHHhccCCCCCeEEEEECcCCCCHHHHH
Confidence 455666665544445554 45566666655443 47999999999999653
No 52
>d1b22a_ a.60.4.1 (A:) DNA repair protein Rad51, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.33 E-value=0.25 Score=38.03 Aligned_cols=27 Identities=33% Similarity=0.447 Sum_probs=24.1
Q ss_pred hccCCHHhhccCCCCCHHHHHHHHHHH
Q 035971 552 LNTGGKEDLKRLKGIGEKRASYILELR 578 (614)
Q Consensus 552 lN~A~~~~L~~l~gig~~~A~~Ii~~R 578 (614)
|=.|+.++|..|+|||+++|++|++.=
T Consensus 37 i~~at~~~L~~i~G~~e~~A~KIi~~a 63 (70)
T d1b22a_ 37 VAYAPKKELINIKGISEAKADKILAEA 63 (70)
T ss_dssp BTSSBHHHHHTTTTCSTTHHHHHHHHH
T ss_pred HHhCCHHHHHHcCCCCHHHHHHHHHHH
Confidence 557899999999999999999999853
No 53
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=82.42 E-value=0.29 Score=45.08 Aligned_cols=30 Identities=20% Similarity=0.287 Sum_probs=20.4
Q ss_pred hHHHHHHHhc---CCceEEEeeccCCCCcceEe
Q 035971 84 VKPLISEVFN---GINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 84 v~plV~~vl~---G~N~tI~aYGqTGSGKTyTm 113 (614)
+..++...+. +...+++-||++|+|||+++
T Consensus 28 l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~ 60 (276)
T d1fnna2 28 LDILLGNWLRNPGHHYPRATLLGRPGTGKTVTL 60 (276)
T ss_dssp HHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHH
T ss_pred HHHHHHHHHhCCCCCCCceEEECCCCCCHHHHH
Confidence 3345555443 33457999999999999653
No 54
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=82.24 E-value=0.21 Score=50.81 Aligned_cols=30 Identities=20% Similarity=0.364 Sum_probs=26.2
Q ss_pred HHHHHHHhcCCceEEEeeccCCCCcceEee
Q 035971 85 KPLISEVFNGINATIVACGAKGSGKTRVIQ 114 (614)
Q Consensus 85 ~plV~~vl~G~N~tI~aYGqTGSGKTyTm~ 114 (614)
...+..++..-++.|+.-|+||||||.||.
T Consensus 147 ~~~l~~l~~~~~GliLvtGpTGSGKSTTl~ 176 (401)
T d1p9ra_ 147 HDNFRRLIKRPHGIILVTGPTGSGKSTTLY 176 (401)
T ss_dssp HHHHHHHHTSSSEEEEEECSTTSCHHHHHH
T ss_pred HHHHHHHHhhhhceEEEEcCCCCCccHHHH
Confidence 345678888999999999999999999985
No 55
>d1wg8a1 a.60.13.1 (A:109-206) Putative methyltransferase TM0872, insert domain {Thermus thermophilus [TaxId: 274]}
Probab=82.23 E-value=0.12 Score=42.61 Aligned_cols=44 Identities=27% Similarity=0.394 Sum_probs=36.3
Q ss_pred HHhhhccCCHHhhccC-CCCC-----HHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 548 YLKLLNTGGKEDLKRL-KGIG-----EKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 548 ~~~~lN~A~~~~L~~l-~gig-----~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
.-++||+++.++|..| .--| .++|++||++|+.. ||.+-.||.+
T Consensus 22 A~~iln~~~~~eL~~if~~yGee~~a~~iA~~Iv~~R~~~--~i~tT~dL~~ 71 (98)
T d1wg8a1 22 AKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREKA--PIETTTQLAE 71 (98)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHS--CCCBHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh--ccchhHHHHH
Confidence 4578999999999874 3333 58999999999986 8999999986
No 56
>d2a1ja1 a.60.2.5 (A:837-898) DNA repair endonuclease XPF {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.20 E-value=0.25 Score=36.88 Aligned_cols=30 Identities=13% Similarity=0.275 Sum_probs=26.0
Q ss_pred HhhhccCCHHhhccCCCCCHHHHHHHHHHHH
Q 035971 549 LKLLNTGGKEDLKRLKGIGEKRASYILELRE 579 (614)
Q Consensus 549 ~~~lN~A~~~~L~~l~gig~~~A~~Ii~~R~ 579 (614)
+..|=.|+.+||..++| |++.|+.|.++=.
T Consensus 26 i~~l~~As~~eL~~v~G-~~~~A~~i~~f~~ 55 (62)
T d2a1ja1 26 IAELAALSQDELTSILG-NAANAKQLYDFIH 55 (62)
T ss_dssp HHHHHTCCHHHHHHHHS-CHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHCcC-cHHHHHHHHHHHh
Confidence 34577899999999999 9999999998753
No 57
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=78.11 E-value=0.17 Score=48.42 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=28.8
Q ss_pred eEeeeeecCCCChHHHHhhhhHHHHHHHh---------cCCceEEEeeccCCCCcceEe
Q 035971 64 YKLDYCYEQNEGNGIIFAREVKPLISEVF---------NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 64 F~FD~VF~~~asQ~eVf~~~v~plV~~vl---------~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+||-|.+.+..-+++- .+|.-+. ......++-||++|+|||++.
T Consensus 9 ~t~~Di~Gl~~~k~~l~-----e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la 62 (256)
T d1lv7a_ 9 TTFADVAGCDEAKEEVA-----ELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLA 62 (256)
T ss_dssp CCGGGSCSCHHHHHHTH-----HHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHH
T ss_pred CCHHHHhchHHHHHHHH-----HHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHH
Confidence 56788888765444442 3333221 234567999999999999764
No 58
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=76.97 E-value=0.41 Score=43.80 Aligned_cols=23 Identities=30% Similarity=0.426 Sum_probs=17.9
Q ss_pred HhcCCceEEEeeccCCCCcceEe
Q 035971 91 VFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 91 vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
+-.|....++-||++|+|||.+.
T Consensus 40 i~~~~~~~lll~Gp~G~GKTtla 62 (231)
T d1iqpa2 40 VKTGSMPHLLFAGPPGVGKTTAA 62 (231)
T ss_dssp HHHTCCCEEEEESCTTSSHHHHH
T ss_pred HHcCCCCeEEEECCCCCcHHHHH
Confidence 33566667999999999999654
No 59
>d2p6ra2 a.289.1.2 (A:489-686) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=76.03 E-value=0.48 Score=43.58 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=26.9
Q ss_pred CHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhc
Q 035971 556 GKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKDI 594 (614)
Q Consensus 556 ~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~ 594 (614)
+.=+|++|||||+++|+++.+ . | |++++||...
T Consensus 142 ell~L~~i~gvgr~rAr~L~~----~-G-i~t~~dl~~a 174 (198)
T d2p6ra2 142 ELLELVRIRHIGRVRARKLYN----A-G-IRNAEDIVRH 174 (198)
T ss_dssp GGHHHHTSTTCCHHHHHHHHT----T-T-CCSHHHHHHT
T ss_pred HHHhHhcCCCCCHHHHHHHHH----c-C-CCCHHHHHHc
Confidence 334688999999999999852 3 6 9999999873
No 60
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.72 E-value=0.43 Score=45.16 Aligned_cols=49 Identities=24% Similarity=0.231 Sum_probs=29.8
Q ss_pred EeeeeecCCCChHHHHhhhhHHHHH-HHhc--C--CceEEEeeccCCCCcceEe
Q 035971 65 KLDYCYEQNEGNGIIFAREVKPLIS-EVFN--G--INATIVACGAKGSGKTRVI 113 (614)
Q Consensus 65 ~FD~VF~~~asQ~eVf~~~v~plV~-~vl~--G--~N~tI~aYGqTGSGKTyTm 113 (614)
.||.|-+.+..-+++-+....|+.. ..+. | ..-.|+-||+.|+|||+..
T Consensus 2 ~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~ 55 (258)
T d1e32a2 2 GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 55 (258)
T ss_dssp CGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHH
T ss_pred ChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHH
Confidence 3677777665555555544434332 2232 3 2346999999999999654
No 61
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=74.99 E-value=0.44 Score=45.05 Aligned_cols=49 Identities=20% Similarity=0.250 Sum_probs=29.2
Q ss_pred eEeeeeecCCCChHHHHhhhhHHHHH-HHh----cCCceEEEeeccCCCCcceEe
Q 035971 64 YKLDYCYEQNEGNGIIFAREVKPLIS-EVF----NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 64 F~FD~VF~~~asQ~eVf~~~v~plV~-~vl----~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+||-|.+-+...+.+ ++.+.++.. ..+ ......|+-||+.|+|||+..
T Consensus 6 ~~~~di~G~~~~k~~l-~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la 59 (247)
T d1ixza_ 6 VTFKDVAGAEEAKEEL-KEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLA 59 (247)
T ss_dssp CCGGGCCSCHHHHHHH-HHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHH
T ss_pred CcHHHHccHHHHHHHH-HHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHH
Confidence 5678887765444444 224443321 112 123346999999999999654
No 62
>d1pu6a_ a.96.1.5 (A:) 3-Methyladenine DNA glycosylase III (MagIII) {Helicobacter pylori [TaxId: 210]}
Probab=74.10 E-value=0.77 Score=42.60 Aligned_cols=25 Identities=36% Similarity=0.326 Sum_probs=22.0
Q ss_pred cCCHHhhccCCCCCHHHHHHHHHHH
Q 035971 554 TGGKEDLKRLKGIGEKRASYILELR 578 (614)
Q Consensus 554 ~A~~~~L~~l~gig~~~A~~Ii~~R 578 (614)
..+.++|.+|||||++.|..|+-|=
T Consensus 116 ~~~~~~L~~lpGIG~kTA~~vl~~~ 140 (217)
T d1pu6a_ 116 EVTREWLLDQKGIGKESADAILCYA 140 (217)
T ss_dssp HCCHHHHHTSTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 3568899999999999999999774
No 63
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.34 E-value=0.68 Score=41.70 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=23.9
Q ss_pred hHHHHHHHhcC---CceEEEeeccCCCCcceE
Q 035971 84 VKPLISEVFNG---INATIVACGAKGSGKTRV 112 (614)
Q Consensus 84 v~plV~~vl~G---~N~tI~aYGqTGSGKTyT 112 (614)
.-+-+|.++.| ....++.||++|||||+-
T Consensus 19 Gi~~LD~ll~GGi~~G~~~li~G~pGsGKT~l 50 (251)
T d1szpa2 19 GSKNLDTLLGGGVETGSITELFGEFRTGKSQL 50 (251)
T ss_dssp SCHHHHHHHTSSEESSSEEEEEESTTSSHHHH
T ss_pred CCHHHHhhhCCCCcCCeEEEEEcCCCCCHHHH
Confidence 34668888988 677899999999999954
No 64
>d1szpa1 a.60.4.1 (A:81-144) DNA repair protein Rad51, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.45 E-value=1.3 Score=33.22 Aligned_cols=45 Identities=22% Similarity=0.381 Sum_probs=33.8
Q ss_pred HHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHH--------hhhh-cCCCHHHHHHHHHHH
Q 035971 557 KEDLKRLKGIGEKRASYILELREESPEPFKNLD--------DLKD-IGLSAKQIKGMMKKE 608 (614)
Q Consensus 557 ~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~--------dL~~-~gl~~~~~~~~~~~~ 608 (614)
.++|+ ++|||+..++.+.+ . | |.+++ ||.+ .|++.+.+++++..+
T Consensus 3 i~~L~-~~Gig~~~~~kL~~----a-G-~~Tve~ia~~t~~~L~~i~Gi~e~~a~KIi~~A 56 (64)
T d1szpa1 3 IEKLQ-VNGITMADVKKLRE----S-G-LHTAEAVAYAPRKDLLEIKGISEAKADKLLNEA 56 (64)
T ss_dssp GGGGC-CTTCCHHHHHHHHT----T-S-CCSHHHHHHSCSHHHHTSTTCCHHHHHHHHHHH
T ss_pred HHHHh-HCCCCHHHHHHHHH----c-C-CCcHHHHHhCCHHHHHHcCCCCHHHHHHHHHHH
Confidence 34554 79999999987643 2 5 87765 5666 799999999998754
No 65
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.65 E-value=0.59 Score=43.02 Aligned_cols=20 Identities=30% Similarity=0.471 Sum_probs=15.9
Q ss_pred CCceEEEeeccCCCCcceEe
Q 035971 94 GINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 94 G~N~tI~aYGqTGSGKTyTm 113 (614)
|.--.++-||++|+|||.+.
T Consensus 50 ~~~~~lll~GPpG~GKTt~a 69 (253)
T d1sxja2 50 GVFRAAMLYGPPGIGKTTAA 69 (253)
T ss_dssp TSCSEEEEECSTTSSHHHHH
T ss_pred CCCceEEEECCCCCCHHHHH
Confidence 34457999999999999654
No 66
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=71.28 E-value=0.43 Score=44.17 Aligned_cols=20 Identities=30% Similarity=0.506 Sum_probs=16.3
Q ss_pred CCceEEEeeccCCCCcceEe
Q 035971 94 GINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 94 G~N~tI~aYGqTGSGKTyTm 113 (614)
+....|+..|++|+|||.|+
T Consensus 4 ~~~~vi~lvGptGvGKTTTi 23 (207)
T d1okkd2 4 PKGRVVLVVGVNGVGKTTTI 23 (207)
T ss_dssp CSSSEEEEECSTTSSHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHH
Confidence 34456778899999999997
No 67
>d1a77a1 a.60.7.1 (A:209-316) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=71.10 E-value=1.8 Score=35.41 Aligned_cols=36 Identities=33% Similarity=0.213 Sum_probs=23.9
Q ss_pred ccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCHHHHHH
Q 035971 561 KRLKGIGEKRASYILELREESPEPFKNLDDLKDIGLSAKQIKG 603 (614)
Q Consensus 561 ~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~~~~~~ 603 (614)
-.||||||+.|-.+|+ + |.++|.|.+-.-..+.+.+
T Consensus 20 pGV~GIGpktA~klIk---~----~g~ie~l~~~~~~~~~~~~ 55 (108)
T d1a77a1 20 GGVKGIGFKRAYELVR---S----GVAKDVLKKEVEYYDEIKR 55 (108)
T ss_dssp TCSTTCCHHHHHHHHH---T----TCHHHHHHHHCTTHHHHHH
T ss_pred CCCCCcCHHHHHHHHH---H----cCCHHHHHHhhhhhHHHHH
Confidence 4799999999999995 2 4467776663333333333
No 68
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.05 E-value=0.59 Score=42.46 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=16.5
Q ss_pred cCCceEEEeeccCCCCcceEe
Q 035971 93 NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 93 ~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+....++-||++|+|||++.
T Consensus 30 ~~~~~~lll~Gp~G~GKTtl~ 50 (237)
T d1sxjd2 30 SANLPHMLFYGPPGTGKTSTI 50 (237)
T ss_dssp CTTCCCEEEECSTTSSHHHHH
T ss_pred cCCCCeEEEECCCCCChHHHH
Confidence 455456899999999999654
No 69
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=69.77 E-value=0.83 Score=41.80 Aligned_cols=25 Identities=28% Similarity=0.510 Sum_probs=20.8
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+..+++|.| +++..+||||||++.
T Consensus 40 aip~il~g~d--vl~~a~TGsGKT~a~ 64 (212)
T d1qdea_ 40 AIMPIIEGHD--VLAQAQSGTGKTGTF 64 (212)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHHcCCC--EEeecccccchhhhh
Confidence 4566789998 688899999999875
No 70
>d1vdda_ e.49.1.1 (A:) Recombination protein RecR {Deinococcus radiodurans [TaxId: 1299]}
Probab=68.88 E-value=1.2 Score=40.90 Aligned_cols=23 Identities=39% Similarity=0.423 Sum_probs=19.5
Q ss_pred HhhccCCCCCHHHHHHHHHHHHh
Q 035971 558 EDLKRLKGIGEKRASYILELREE 580 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~ 580 (614)
++|.+|||||++.|++|.-|=-+
T Consensus 12 ~~l~kLPGIG~KsA~Rla~~LL~ 34 (199)
T d1vdda_ 12 RELSRLPGIGPKSAQRLAFHLFE 34 (199)
T ss_dssp HHHHTSTTCCHHHHHHHHHHHSS
T ss_pred HHHHHCCCCCHHHHHHHHHHHHc
Confidence 46889999999999999877533
No 71
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.39 E-value=0.69 Score=39.45 Aligned_cols=16 Identities=38% Similarity=0.646 Sum_probs=13.3
Q ss_pred EEEeeccCCCCcceEe
Q 035971 98 TIVACGAKGSGKTRVI 113 (614)
Q Consensus 98 tI~aYGqTGSGKTyTm 113 (614)
.|+-+|+.|+|||+++
T Consensus 3 ~v~ItG~~GtGKTtl~ 18 (189)
T d2i3ba1 3 HVFLTGPPGVGKTTLI 18 (189)
T ss_dssp CEEEESCCSSCHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 3778899999999765
No 72
>d2noha1 a.96.1.3 (A:136-325) 8-oxoguanine glycosylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.51 E-value=1.4 Score=39.68 Aligned_cols=23 Identities=26% Similarity=0.304 Sum_probs=19.8
Q ss_pred HHhhccCCCCCHHHHHHHHHHHH
Q 035971 557 KEDLKRLKGIGEKRASYILELRE 579 (614)
Q Consensus 557 ~~~L~~l~gig~~~A~~Ii~~R~ 579 (614)
.++|++|||||++.|+.|+-+--
T Consensus 102 ~~~L~~l~GIG~wTA~~il~~~~ 124 (190)
T d2noha1 102 HKALCILPGVGTQVADCICLMAL 124 (190)
T ss_dssp HHHHTTSTTCCHHHHHHHHHHHS
T ss_pred HHHHHHcCCchHHHHHHHHHHHc
Confidence 35799999999999999988753
No 73
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=67.46 E-value=0.76 Score=38.56 Aligned_cols=15 Identities=40% Similarity=0.634 Sum_probs=13.0
Q ss_pred EEEeeccCCCCcceE
Q 035971 98 TIVACGAKGSGKTRV 112 (614)
Q Consensus 98 tI~aYGqTGSGKTyT 112 (614)
.|+.+|++|||||+.
T Consensus 4 lIii~G~pGsGKTTl 18 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTW 18 (152)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 477899999999975
No 74
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=67.45 E-value=0.51 Score=42.44 Aligned_cols=23 Identities=30% Similarity=0.557 Sum_probs=18.3
Q ss_pred HHHHhcCCceEEEeeccCCCCcceE
Q 035971 88 ISEVFNGINATIVACGAKGSGKTRV 112 (614)
Q Consensus 88 V~~vl~G~N~tI~aYGqTGSGKTyT 112 (614)
+..+++|.| ++..++||||||++
T Consensus 34 i~~l~~~~~--~il~apTGsGKT~~ 56 (202)
T d2p6ra3 34 VEKVFSGKN--LLLAMPTAAGKTLL 56 (202)
T ss_dssp HHHHTTCSC--EEEECSSHHHHHHH
T ss_pred HHHHHcCCC--EEEEcCCCCchhHH
Confidence 456778876 56789999999965
No 75
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=67.08 E-value=1.2 Score=40.45 Aligned_cols=43 Identities=19% Similarity=0.273 Sum_probs=25.3
Q ss_pred EeeeeecCCCChHHHHhhhhHHHHHHHh-cC-CceEEEeeccCCCCcceE
Q 035971 65 KLDYCYEQNEGNGIIFAREVKPLISEVF-NG-INATIVACGAKGSGKTRV 112 (614)
Q Consensus 65 ~FD~VF~~~asQ~eVf~~~v~plV~~vl-~G-~N~tI~aYGqTGSGKTyT 112 (614)
+||.+.+ |+++-+ .++.+++... .| .-..++-||++|+|||.+
T Consensus 7 ~~~divG----qe~~~~-~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~l 51 (238)
T d1in4a2 7 SLDEFIG----QENVKK-KLSLALEAAKMRGEVLDHVLLAGPPGLGKTTL 51 (238)
T ss_dssp SGGGCCS----CHHHHH-HHHHHHHHHHHHTCCCCCEEEESSTTSSHHHH
T ss_pred cHHHcCC----hHHHHH-HHHHHHHHHHhcCCCCCeEEEECCCCCcHHHH
Confidence 3566665 344433 3445554433 22 233567799999999964
No 76
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=66.34 E-value=1.2 Score=40.21 Aligned_cols=25 Identities=32% Similarity=0.496 Sum_probs=20.2
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+..+++|.| +++.++||||||...
T Consensus 31 aip~il~g~d--vi~~a~tGsGKTlay 55 (206)
T d1s2ma1 31 AIPVAITGRD--ILARAKNGTGKTAAF 55 (206)
T ss_dssp HHHHHHHTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHcCCC--EEEecCCcchhhhhh
Confidence 3556778998 789999999999653
No 77
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=66.18 E-value=1 Score=41.38 Aligned_cols=24 Identities=21% Similarity=0.285 Sum_probs=18.7
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceE
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRV 112 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyT 112 (614)
.+..++.|.|.. ..++||||||.+
T Consensus 51 ~i~~~l~g~~~~--i~apTGsGKT~~ 74 (237)
T d1gkub1 51 WAKRILRKESFA--ATAPTGVGKTSF 74 (237)
T ss_dssp HHHHHHTTCCEE--CCCCBTSCSHHH
T ss_pred HHHHHHCCCCEE--EEecCCChHHHH
Confidence 467788998865 447999999954
No 78
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=65.67 E-value=1.3 Score=40.30 Aligned_cols=44 Identities=18% Similarity=0.198 Sum_probs=26.4
Q ss_pred EeeeeecCCCChHHHHhhhhHHHHHHHhcC--CceEEEeeccCCCCcceEe
Q 035971 65 KLDYCYEQNEGNGIIFAREVKPLISEVFNG--INATIVACGAKGSGKTRVI 113 (614)
Q Consensus 65 ~FD~VF~~~asQ~eVf~~~v~plV~~vl~G--~N~tI~aYGqTGSGKTyTm 113 (614)
+||.|+++ +++-+ .++.+++....+ .-..++-||++|+|||.+.
T Consensus 7 ~~ddivGq----~~~~~-~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla 52 (239)
T d1ixsb2 7 TLDEYIGQ----ERLKQ-KLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLA 52 (239)
T ss_dssp SGGGSCSC----HHHHH-HHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHH
T ss_pred CHHHhCCH----HHHHH-HHHHHHHHHHhcCCCCCeEEEECCCCCCHHHHH
Confidence 36666654 33432 345555554432 2235778999999999554
No 79
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=65.65 E-value=1.1 Score=40.56 Aligned_cols=20 Identities=30% Similarity=0.512 Sum_probs=15.3
Q ss_pred cCCceEEEeeccCCCCcceE
Q 035971 93 NGINATIVACGAKGSGKTRV 112 (614)
Q Consensus 93 ~G~N~tI~aYGqTGSGKTyT 112 (614)
.|.-..++-||++|+|||.+
T Consensus 32 ~~~~~~lLl~Gp~G~GKttl 51 (227)
T d1sxjc2 32 EGKLPHLLFYGPPGTGKTST 51 (227)
T ss_dssp TTCCCCEEEECSSSSSHHHH
T ss_pred cCCCCeEEEECCCCCChhHH
Confidence 45544577899999999953
No 80
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=65.20 E-value=0.93 Score=41.36 Aligned_cols=26 Identities=19% Similarity=0.303 Sum_probs=19.9
Q ss_pred HHHHhcCCceEEEeeccCCCCcceEe
Q 035971 88 ISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 88 V~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
++.+.++...+|+.||+.|+|||..+
T Consensus 21 l~~l~~~~~~~i~i~G~~G~GKTsLl 46 (283)
T d2fnaa2 21 IEKLKGLRAPITLVLGLRRTGKSSII 46 (283)
T ss_dssp HHHHHHTCSSEEEEEESTTSSHHHHH
T ss_pred HHHHHhccCCEEEEEcCCCCcHHHHH
Confidence 44445566778999999999999654
No 81
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=64.97 E-value=0.87 Score=42.08 Aligned_cols=17 Identities=29% Similarity=0.548 Sum_probs=10.4
Q ss_pred eEEEeeccCCCCcceEe
Q 035971 97 ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyTm 113 (614)
..|+-.|++|+|||.|+
T Consensus 13 ~vi~lvGptGvGKTTTi 29 (211)
T d1j8yf2 13 YVIMLVGVQGTGKATTA 29 (211)
T ss_dssp EEEEEECSCCC----HH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 45666899999999986
No 82
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=64.47 E-value=0.74 Score=37.62 Aligned_cols=16 Identities=44% Similarity=0.376 Sum_probs=12.5
Q ss_pred EEEeeccCCCCcceEe
Q 035971 98 TIVACGAKGSGKTRVI 113 (614)
Q Consensus 98 tI~aYGqTGSGKTyTm 113 (614)
.++.+++||||||+.+
T Consensus 9 ~~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 9 TTVLDFHPGAGKTRRF 24 (140)
T ss_dssp EEEECCCTTSSTTTTH
T ss_pred cEEEEcCCCCChhHHH
Confidence 3467788999999765
No 83
>d1ngna_ a.96.1.2 (A:) Mismatch-specific thymine glycosylase domain of the methyl-GpG binding protein mbd4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=64.25 E-value=1.2 Score=38.63 Aligned_cols=22 Identities=18% Similarity=0.058 Sum_probs=19.1
Q ss_pred CHHhhccCCCCCHHHHHHHHHH
Q 035971 556 GKEDLKRLKGIGEKRASYILEL 577 (614)
Q Consensus 556 ~~~~L~~l~gig~~~A~~Ii~~ 577 (614)
+.++|.+|||||++.|+.+.=+
T Consensus 91 ~~~~l~~LpGVG~~tad~~~if 112 (144)
T d1ngna_ 91 QWRYPIELHGIGKYGNDSYRIF 112 (144)
T ss_dssp CCSSGGGSTTCCHHHHHHHHHH
T ss_pred hhhhHHhcCCccHHHHHHHHHH
Confidence 6789999999999999997544
No 84
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.04 E-value=1.2 Score=40.42 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=17.2
Q ss_pred HhcCCceEEEeeccCCCCcceEe
Q 035971 91 VFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 91 vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
+-+|....++-||+.|+|||.+.
T Consensus 31 ~~~~~~~~~ll~Gp~G~GKTt~a 53 (224)
T d1sxjb2 31 AKDGNMPHMIISGMPGIGKTTSV 53 (224)
T ss_dssp HHSCCCCCEEEECSTTSSHHHHH
T ss_pred HHcCCCCeEEEECCCCCCchhhH
Confidence 34565556788999999999654
No 85
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=62.75 E-value=0.89 Score=42.71 Aligned_cols=17 Identities=47% Similarity=0.661 Sum_probs=14.0
Q ss_pred eEEEeeccCCCCcceEe
Q 035971 97 ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyTm 113 (614)
+-++..|+.|||||+||
T Consensus 15 ~~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVI 31 (306)
T ss_dssp SEEEECCCTTSCHHHHH
T ss_pred CCEEEEeeCCccHHHHH
Confidence 34567799999999986
No 86
>d2edua1 a.60.2.7 (A:8-98) KIF22, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.48 E-value=2.3 Score=33.95 Aligned_cols=24 Identities=33% Similarity=0.455 Sum_probs=21.5
Q ss_pred cCCHHhhccCCCCCHHHHHHHHHH
Q 035971 554 TGGKEDLKRLKGIGEKRASYILEL 577 (614)
Q Consensus 554 ~A~~~~L~~l~gig~~~A~~Ii~~ 577 (614)
=-+.+||..++|||++..++|+++
T Consensus 59 f~sledL~~V~Gi~~k~~eki~k~ 82 (91)
T d2edua1 59 FSQVEDLERVEGITGKQMESFLKA 82 (91)
T ss_dssp CSSGGGGGGSTTCCHHHHHHHHHH
T ss_pred CCCHHHHhcCCCCCHHHHHHHHHc
Confidence 347899999999999999999875
No 87
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=62.42 E-value=2 Score=40.07 Aligned_cols=29 Identities=24% Similarity=0.547 Sum_probs=23.6
Q ss_pred hhHHHHHHHhcCCceEEEeeccCCCCcce
Q 035971 83 EVKPLISEVFNGINATIVACGAKGSGKTR 111 (614)
Q Consensus 83 ~v~plV~~vl~G~N~tI~aYGqTGSGKTy 111 (614)
+...+..++-.+.-...+-+|.+|||||-
T Consensus 63 ~~~~i~~~~~~~~~~~~LL~GdvGsGKT~ 91 (233)
T d2eyqa3 63 AINAVLSDMCQPLAMDRLVCGDVGFGKTE 91 (233)
T ss_dssp HHHHHHHHHHSSSCCEEEEECCCCTTTHH
T ss_pred HHHHHHHHHhccCccCeEEEcCCCCCcHH
Confidence 34466677778888899999999999993
No 88
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=61.90 E-value=0.8 Score=43.63 Aligned_cols=18 Identities=39% Similarity=0.685 Sum_probs=14.8
Q ss_pred ceEEEeeccCCCCcceEe
Q 035971 96 NATIVACGAKGSGKTRVI 113 (614)
Q Consensus 96 N~tI~aYGqTGSGKTyTm 113 (614)
.+.++.-|+.|||||+||
T Consensus 24 ~g~~lV~g~aGSGKTt~l 41 (318)
T d1pjra1 24 EGPLLIMAGAGSGKTRVL 41 (318)
T ss_dssp SSCEEEEECTTSCHHHHH
T ss_pred CCCEEEEecCCccHHHHH
Confidence 345777799999999986
No 89
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=61.45 E-value=1.2 Score=40.04 Aligned_cols=25 Identities=28% Similarity=0.512 Sum_probs=19.4
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+..+++|.| |++..+||||||.+.
T Consensus 31 aip~~l~G~d--vii~a~TGSGKTlay 55 (209)
T d1q0ua_ 31 IIPGALRGES--MVGQSQTGTGKTHAY 55 (209)
T ss_dssp HHHHHHHTCC--EEEECCSSHHHHHHH
T ss_pred HHHHHHCCCC--eEeecccccccceee
Confidence 3456678987 577789999999764
No 90
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=61.25 E-value=0.88 Score=42.10 Aligned_cols=17 Identities=41% Similarity=0.628 Sum_probs=14.5
Q ss_pred eEEEeeccCCCCcceEe
Q 035971 97 ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyTm 113 (614)
..|+..|++|+|||.|+
T Consensus 10 ~vi~lvGptGvGKTTTi 26 (211)
T d2qy9a2 10 FVILMVGVNGVGKTTTI 26 (211)
T ss_dssp EEEEEECCTTSCHHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 45677899999999997
No 91
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=60.78 E-value=3.7 Score=36.90 Aligned_cols=29 Identities=34% Similarity=0.496 Sum_probs=23.2
Q ss_pred hHHHHHHHhcC---CceEEEeeccCCCCcceE
Q 035971 84 VKPLISEVFNG---INATIVACGAKGSGKTRV 112 (614)
Q Consensus 84 v~plV~~vl~G---~N~tI~aYGqTGSGKTyT 112 (614)
.-+-+|.++.| ....++.||++|+|||..
T Consensus 11 G~~~LD~~l~GGi~~gsl~li~G~pGsGKT~l 42 (242)
T d1tf7a2 11 GVVRLDEMCGGGFFKDSIILATGATGTGKTLL 42 (242)
T ss_dssp SCHHHHHHTTSSEESSCEEEEEECTTSSHHHH
T ss_pred CcHHHHHhhcCCCcCCeEEEEEeCCCCCHHHH
Confidence 34567888886 677899999999999844
No 92
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=60.27 E-value=1.5 Score=41.91 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=27.1
Q ss_pred CCCChHHHHhhhhHHHHHHHhcCCceEEEeeccCCCCcce
Q 035971 72 QNEGNGIIFAREVKPLISEVFNGINATIVACGAKGSGKTR 111 (614)
Q Consensus 72 ~~asQ~eVf~~~v~plV~~vl~G~N~tI~aYGqTGSGKTy 111 (614)
...+|..+++ .+..++-.+....-+-+|.+|||||-
T Consensus 84 LT~~Q~~ai~----ei~~d~~~~~~m~rLL~GdvGSGKT~ 119 (264)
T d1gm5a3 84 LTNAQKRAHQ----EIRNDMISEKPMNRLLQGDVGSGKTV 119 (264)
T ss_dssp CCHHHHHHHH----HHHHHHHSSSCCCCEEECCSSSSHHH
T ss_pred CCchHHHHHH----HHHHHhhccCcceeeeeccccccccH
Confidence 3445655554 56677778888889999999999994
No 93
>d2o3fa1 a.4.1.20 (A:1-83) Putative transcriptional regulator YbbH {Bacillus subtilis [TaxId: 1423]}
Probab=59.84 E-value=6.1 Score=30.61 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHHH
Q 035971 568 EKRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKKE 608 (614)
Q Consensus 568 ~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~~ 608 (614)
.++|++|++..+.. .+.++.||.+ .|+|+..|-++.++.
T Consensus 21 ~~ia~yil~~~~~~--~~~si~~lA~~~~vS~sTi~Rf~kkl 60 (83)
T d2o3fa1 21 RKLADYILAHPHKA--IESTVNEISALANSSDAAVIRLCKSL 60 (83)
T ss_dssp HHHHHHHHHCHHHH--HTCCHHHHHHHTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHcCHHHH--HHccHHHHHHHHCCCHHHHHHHHHHh
Confidence 47999999999998 6999999999 999999999998763
No 94
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=59.57 E-value=1.4 Score=43.11 Aligned_cols=26 Identities=42% Similarity=0.744 Sum_probs=18.0
Q ss_pred HHHHHHh-cCCceEEEeeccCCCCcceEe
Q 035971 86 PLISEVF-NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 86 plV~~vl-~G~N~tI~aYGqTGSGKTyTm 113 (614)
.++..++ .|.| |+..|+||||||.+|
T Consensus 157 ~~l~~~v~~~~n--ili~G~tgSGKTT~l 183 (323)
T d1g6oa_ 157 SAIKDGIAIGKN--VIVCGGTGSGKTTYI 183 (323)
T ss_dssp HHHHHHHHHTCC--EEEEESTTSSHHHHH
T ss_pred HHHHHHHHhCCC--EEEEeeccccchHHH
Confidence 3444444 4555 567899999999776
No 95
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=59.54 E-value=0.96 Score=41.84 Aligned_cols=17 Identities=35% Similarity=0.569 Sum_probs=14.5
Q ss_pred eEEEeeccCCCCcceEe
Q 035971 97 ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyTm 113 (614)
..|+..|++|+|||.|+
T Consensus 12 ~vi~lvGptGvGKTTTi 28 (213)
T d1vmaa2 12 FVIMVVGVNGTGKTTSC 28 (213)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 35677899999999996
No 96
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=59.39 E-value=2.3 Score=38.32 Aligned_cols=29 Identities=28% Similarity=0.413 Sum_probs=23.1
Q ss_pred hHHHHHHHhcC---CceEEEeeccCCCCcceE
Q 035971 84 VKPLISEVFNG---INATIVACGAKGSGKTRV 112 (614)
Q Consensus 84 v~plV~~vl~G---~N~tI~aYGqTGSGKTyT 112 (614)
.-|-+|.++.| .+..++.+|++|||||..
T Consensus 21 Gi~~LD~ll~GGlp~G~~~li~G~pGsGKT~~ 52 (254)
T d1pzna2 21 GSKSLDKLLGGGIETQAITEVFGEFGSGKTQL 52 (254)
T ss_dssp SCHHHHHHHTSSEESSEEEEEEESTTSSHHHH
T ss_pred CCHHHHHhhcCCccCCEEEEEEcCCCCCHHHH
Confidence 44667888887 566899999999999954
No 97
>d1b43a1 a.60.7.1 (A:220-339) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=59.05 E-value=5 Score=33.36 Aligned_cols=39 Identities=28% Similarity=0.234 Sum_probs=25.3
Q ss_pred ccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh--cCCCHHHHHHHHH
Q 035971 561 KRLKGIGEKRASYILELREESPEPFKNLDDLKD--IGLSAKQIKGMMK 606 (614)
Q Consensus 561 ~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~--~gl~~~~~~~~~~ 606 (614)
.+||||||+.|-.||+. + .+++...+ .....+.+.+++.
T Consensus 20 ~gI~GIGpktAlklikk---~----~~~~~~~~~~~~~~~~~~~~~f~ 60 (120)
T d1b43a1 20 GGIKGIGLKKALEIVRH---S----KDPLAKFQKQSDVDLYAIKEFFL 60 (120)
T ss_dssp TCSTTCCHHHHHHHHHT---C----SSGGGGTGGGCSSCHHHHHHHHH
T ss_pred ccCCCcCHHHHHHHHHH---h----CCHHHHHHhccccchHHHHHHhc
Confidence 36999999999999962 3 35444333 4455555555543
No 98
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=58.35 E-value=1.1 Score=43.36 Aligned_cols=16 Identities=38% Similarity=0.677 Sum_probs=13.2
Q ss_pred eEEEeeccCCCCcceE
Q 035971 97 ATIVACGAKGSGKTRV 112 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyT 112 (614)
..|+-|||||+|||..
T Consensus 50 ~~iLl~GPpG~GKT~l 65 (309)
T d1ofha_ 50 KNILMIGPTGVGKTEI 65 (309)
T ss_dssp CCEEEECCTTSSHHHH
T ss_pred ceEEEECCCCCCHHHH
Confidence 4567799999999954
No 99
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.94 E-value=2.4 Score=38.20 Aligned_cols=25 Identities=28% Similarity=0.514 Sum_probs=19.6
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+..+++|.| +++-.+||||||.+.
T Consensus 31 aip~il~g~d--vl~~A~TGsGKTla~ 55 (207)
T d1t6na_ 31 CIPQAILGMD--VLCQAKSGMGKTAVF 55 (207)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHcCCC--eEEEecccccccccc
Confidence 4556789988 567779999999764
No 100
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.00 E-value=2.8 Score=37.78 Aligned_cols=25 Identities=24% Similarity=0.387 Sum_probs=19.6
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+..+++|.|. ++..+||||||.+.
T Consensus 33 aip~il~g~dv--l~~a~TGsGKTlay 57 (206)
T d1veca_ 33 SIPIALSGRDI--LARAKNGTGKSGAY 57 (206)
T ss_dssp HHHHHHTTCCE--EEECCSSSTTHHHH
T ss_pred HHHHHHcCCCE--EeeccCcccccccc
Confidence 45667899884 66779999999764
No 101
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=55.89 E-value=1.2 Score=40.83 Aligned_cols=17 Identities=35% Similarity=0.442 Sum_probs=14.1
Q ss_pred eEEEeeccCCCCcceEe
Q 035971 97 ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyTm 113 (614)
..|+-.|++|+|||+|+
T Consensus 11 ~vi~lvGp~GvGKTTTi 27 (207)
T d1ls1a2 11 NLWFLVGLQGSGKTTTA 27 (207)
T ss_dssp EEEEEECCTTTTHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 34666899999999997
No 102
>d1ul1x1 a.60.7.1 (X:218-357) Flap endonuclease-1 (Fen-1 nuclease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.97 E-value=3.7 Score=34.73 Aligned_cols=27 Identities=26% Similarity=0.573 Sum_probs=21.7
Q ss_pred hccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 560 LKRLKGIGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 560 L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
+-.|||||++.|.++|.. |.++|.+.+
T Consensus 18 ~pgv~gIG~ktA~kli~~-------~~~le~i~~ 44 (140)
T d1ul1x1 18 CESIRGIGPKRAVDLIQK-------HKSIEEIVR 44 (140)
T ss_dssp SCCCTTCCHHHHHHHHHH-------SSSHHHHHT
T ss_pred CCCCCCccHHHHHHHHHH-------hCCHHHHHH
Confidence 457999999999999863 557887755
No 103
>d1dgsa1 a.60.2.2 (A:401-581) NAD+-dependent DNA ligase, domain 3 {Thermus filiformis [TaxId: 276]}
Probab=54.76 E-value=6.1 Score=35.13 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=31.2
Q ss_pred ccCCCCCHHHHHHHHHH----HHhCCCCCCCHHhhhh-cCCCHHHHHHHHH
Q 035971 561 KRLKGIGEKRASYILEL----REESPEPFKNLDDLKD-IGLSAKQIKGMMK 606 (614)
Q Consensus 561 ~~l~gig~~~A~~Ii~~----R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~ 606 (614)
..|||||+..|+.+.++ ..-. =.+.+||.. -||+++.++.+..
T Consensus 110 LGI~~vG~~~Ak~La~~f~sl~~l~---~as~eeL~~I~GIG~~~A~si~~ 157 (181)
T d1dgsa1 110 LGLPGVGEVLARNLARRFGTMDRLL---EASLEELIEVEEVGELTARAILE 157 (181)
T ss_dssp TTCSSCCHHHHHHHHHTTSBHHHHT---TCCHHHHHTSTTCCHHHHHHHHH
T ss_pred HHhhhhhHHHHHHHHHHhhhhhhhh---hhHHHHHhhcCCcCHHHHHHHHH
Confidence 35899999999999874 1111 236677878 7999988877654
No 104
>d1mpga1 a.96.1.3 (A:100-282) 3-Methyladenine DNA glycosylase II (gene alkA or aidA) {Escherichia coli [TaxId: 562]}
Probab=54.70 E-value=2.9 Score=37.33 Aligned_cols=48 Identities=27% Similarity=0.383 Sum_probs=30.3
Q ss_pred HHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhh--hh--cCCCHHHHHHHH
Q 035971 557 KEDLKRLKGIGEKRASYILELREESPEPFKNLDDL--KD--IGLSAKQIKGMM 605 (614)
Q Consensus 557 ~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL--~~--~gl~~~~~~~~~ 605 (614)
.+.|++|||||+..|+-|+=+--...--| .++|+ .+ .+++.+.+.++.
T Consensus 107 ~~~L~~l~GIGpwTAd~illf~lg~~dvf-P~~D~~lr~~~~~l~~~~~~~~~ 158 (183)
T d1mpga1 107 MKTLQTFPGIGRWTANYFALRGWQAKDVF-LPDDYLIKQRFPGMTPAQIRRYA 158 (183)
T ss_dssp HHHHTTSTTCCHHHHHHHHHHHSCCSSCC-CTTCHHHHHHSTTCCHHHHHHHH
T ss_pred HHHHHHhhcccHHHHHHHHHhhCCCCCcc-ccchHHHHHHhhhCCHHHHHHHH
Confidence 36799999999999998886532221113 33343 23 556777766654
No 105
>d1keaa_ a.96.1.2 (A:) Thymine-DNA glycosylase {Archaeon Methanobacterium thermoformicicum [TaxId: 145262]}
Probab=53.49 E-value=7.1 Score=35.59 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=42.4
Q ss_pred hccCCHHhhcc-CCCCC--HHHHHHHHH----HHHhCCCC-CCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 552 LNTGGKEDLKR-LKGIG--EKRASYILE----LREESPEP-FKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 552 lN~A~~~~L~~-l~gig--~~~A~~Ii~----~R~~~gg~-f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
+=.|+.++|.. |.|+| ..+|++|.+ ..+++||. =.+.++|.. .|++.+++.-+|.-
T Consensus 68 la~a~~~~l~~~i~~~G~~~~KA~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGVG~kTA~~il~~ 132 (217)
T d1keaa_ 68 ILKTPKSEIAKDIKEIGLSNQRAEQLKELARVVINDYGGRVPRNRKAILDLPGVGKYTCAAVMCL 132 (217)
T ss_dssp HHHSCHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHHTTSCCSCHHHHHTSTTCCHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHhhhhhhhHHHHHH
Confidence 34678888874 89999 458888765 34444553 358999999 99999999988864
No 106
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=53.49 E-value=1.6 Score=38.82 Aligned_cols=24 Identities=25% Similarity=0.443 Sum_probs=17.9
Q ss_pred HHHHhcCCceEEEeeccCCCCcceEe
Q 035971 88 ISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 88 V~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
|+.+++|.|+ +..-+||||||...
T Consensus 34 i~~~l~g~~v--lv~apTGsGKT~~~ 57 (206)
T d1oywa2 34 IDTVLSGRDC--LVVMPTGGGKSLCY 57 (206)
T ss_dssp HHHHHTTCCE--EEECSCHHHHHHHH
T ss_pred HHHHHcCCCE--EEEcCCCCCCcchh
Confidence 3467889885 55578999999653
No 107
>d1doqa_ a.60.3.1 (A:) C-terminal domain of RNA polymerase alpha subunit {Thermus thermophilus [TaxId: 274]}
Probab=53.48 E-value=4.7 Score=30.37 Aligned_cols=35 Identities=31% Similarity=0.317 Sum_probs=28.6
Q ss_pred hhccCCHHhhccCCCCCHHHHHHHHHHHHhCCCCC
Q 035971 551 LLNTGGKEDLKRLKGIGEKRASYILELREESPEPF 585 (614)
Q Consensus 551 ~lN~A~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f 585 (614)
.|-..+.++|..+||+|++..+.|.+.=.++|=.|
T Consensus 33 dL~~~s~~dLl~i~n~G~ksl~EI~~~L~~~gl~l 67 (69)
T d1doqa_ 33 ALLALNLKDLKNIPGIGERSLEEIKEALEKKGFTL 67 (69)
T ss_dssp HHHHSCHHHHTTSTTCCHHHHHHHHHHHHHHCCCS
T ss_pred HHHHCCHHHHHhCCCCCHHHHHHHHHHHHHcCCcC
Confidence 34467999999999999999999998877774334
No 108
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=53.46 E-value=2 Score=38.67 Aligned_cols=25 Identities=28% Similarity=0.295 Sum_probs=16.6
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.++.++++.++.| .++||+|||+++
T Consensus 78 av~~~~~~~~~ll--~~~tG~GKT~~a 102 (206)
T d2fz4a1 78 ALERWLVDKRGCI--VLPTGSGKTHVA 102 (206)
T ss_dssp HHHHHTTTSEEEE--EESSSTTHHHHH
T ss_pred HHHHHHhCCCcEE--EeCCCCCceehH
Confidence 3445666655543 368999999764
No 109
>d1m6ya1 a.60.13.1 (A:115-215) Putative methyltransferase TM0872, insert domain {Thermotoga maritima [TaxId: 2336]}
Probab=53.36 E-value=2.4 Score=34.49 Aligned_cols=40 Identities=35% Similarity=0.457 Sum_probs=29.7
Q ss_pred HhhhccCCHHhhccC---CC----CCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 549 LKLLNTGGKEDLKRL---KG----IGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 549 ~~~lN~A~~~~L~~l---~g----ig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
-++||+++.++|..| .| .-.++|++|++.| ||.+..||.+
T Consensus 25 ~~~ln~~~~~~L~~Il~~yGee~~~a~~ia~~Iv~~R-----~i~tt~~L~~ 71 (101)
T d1m6ya1 25 QKVLNELPEEELARIIFEYGEEKRFARRIARKIVENR-----PLNTTLDLVK 71 (101)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCTTTHHHHHHHHHHTC-----SCCBHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHhccchhhhHHHHHHHHHhc-----ccccHHHHHH
Confidence 478999999999862 33 3456677777655 6889999876
No 110
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.15 E-value=3.1 Score=35.68 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=21.6
Q ss_pred hHHHHHHHhcCC---ceEEEeeccCCCCcceE
Q 035971 84 VKPLISEVFNGI---NATIVACGAKGSGKTRV 112 (614)
Q Consensus 84 v~plV~~vl~G~---N~tI~aYGqTGSGKTyT 112 (614)
.-+-+|.++.|. ...+.-+|++|||||..
T Consensus 8 G~~~LD~ll~GGi~~G~v~~i~G~~GsGKT~l 39 (242)
T d1n0wa_ 8 GSKELDKLLQGGIETGSITEMFGEFRTGKTQI 39 (242)
T ss_dssp SCHHHHHHTTTSEETTSEEEEECCTTSSHHHH
T ss_pred CCHHHHHhhcCCCcCCEEEEEEeCCCCCHHHH
Confidence 345577788743 56788899999999943
No 111
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=53.10 E-value=1.8 Score=36.33 Aligned_cols=15 Identities=27% Similarity=0.512 Sum_probs=12.3
Q ss_pred EEEeeccCCCCcceE
Q 035971 98 TIVACGAKGSGKTRV 112 (614)
Q Consensus 98 tI~aYGqTGSGKTyT 112 (614)
.|+..|++|||||+.
T Consensus 4 lI~i~G~~GsGKTTv 18 (176)
T d2bdta1 4 LYIITGPAGVGKSTT 18 (176)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 367789999999954
No 112
>d1gm5a2 b.40.4.9 (A:106-285) RecG "wedge" domain {Thermotoga maritima [TaxId: 2336]}
Probab=53.00 E-value=2.9 Score=36.86 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=24.3
Q ss_pred HhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 558 EDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
++|..|+||||++|+.. ++. | +.++.||..
T Consensus 10 ~~i~~lkGvGpk~~~~L----~kl-g-I~ti~DLL~ 39 (180)
T d1gm5a2 10 TDIQYAKGVGPNRKKKL----KKL-G-IETLRDLLE 39 (180)
T ss_dssp CCSSSSSSCCHHHHHHH----HTT-T-CCSSGGGTS
T ss_pred CChhhcCCcCHHHHHHH----HHh-C-CCcHHHHHH
Confidence 57889999999999987 245 4 789999865
No 113
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=52.43 E-value=1.9 Score=39.16 Aligned_cols=16 Identities=25% Similarity=0.522 Sum_probs=13.7
Q ss_pred EEEeeccCCCCcceEe
Q 035971 98 TIVACGAKGSGKTRVI 113 (614)
Q Consensus 98 tI~aYGqTGSGKTyTm 113 (614)
.++-||+.|+|||.+.
T Consensus 35 ~lll~Gp~G~GKTt~~ 50 (252)
T d1sxje2 35 HLLLYGPNGTGKKTRC 50 (252)
T ss_dssp CEEEECSTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4889999999999654
No 114
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.27 E-value=1.3 Score=38.56 Aligned_cols=19 Identities=37% Similarity=0.623 Sum_probs=15.0
Q ss_pred cCC-ceEEEeeccCCCCcce
Q 035971 93 NGI-NATIVACGAKGSGKTR 111 (614)
Q Consensus 93 ~G~-N~tI~aYGqTGSGKTy 111 (614)
.|+ .++||-.|.+|||||+
T Consensus 15 ~~~~g~vI~L~G~pGSGKTT 34 (195)
T d1x6va3 15 GGFRGCTVWLTGLSGAGKTT 34 (195)
T ss_dssp CSCCCEEEEEESSCHHHHHH
T ss_pred cCCCCeEEEEECCCCCCHHH
Confidence 344 4578899999999985
No 115
>d1xo1a1 a.60.7.1 (A:186-290) T5 5'-exonuclease {Bacteriophage T5 [TaxId: 10726]}
Probab=52.15 E-value=4.7 Score=32.76 Aligned_cols=29 Identities=34% Similarity=0.652 Sum_probs=23.7
Q ss_pred HhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 558 EDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
+-+-.+||||++.|..+|.. |.+++++.+
T Consensus 19 DnipGV~GiG~KtA~kli~~-------~gsle~i~~ 47 (105)
T d1xo1a1 19 DNIRGVEGIGAKRGYNIIRE-------FGNVLDIID 47 (105)
T ss_dssp GTBCCCTTCCHHHHHHHHHH-------HCSHHHHHH
T ss_pred cCCcCcCCcCHHHHHHHHHH-------cchhHHHHH
Confidence 44678999999999999952 448988887
No 116
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.11 E-value=3.4 Score=37.86 Aligned_cols=25 Identities=28% Similarity=0.537 Sum_probs=19.4
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.|..+++|.|. ++..+||||||.+.
T Consensus 47 aIp~il~g~dv--i~~a~TGSGKTlay 71 (222)
T d2j0sa1 47 AIKQIIKGRDV--IAQSQSGTGKTATF 71 (222)
T ss_dssp HHHHHHTTCCE--EEECCTTSSHHHHH
T ss_pred HHHHHHCCCCe--EEEcCcchhhhhhh
Confidence 46667889885 56779999999764
No 117
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.77 E-value=3.2 Score=37.79 Aligned_cols=25 Identities=28% Similarity=0.501 Sum_probs=19.3
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+..++.|.| +++..+||||||.+.
T Consensus 42 aip~il~g~d--vl~~a~TGsGKTlay 66 (218)
T d2g9na1 42 AILPCIKGYD--VIAQAQSGTGKTATF 66 (218)
T ss_dssp HHHHHHHTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHHcCCC--EEEEcccchhhhhhh
Confidence 3455678988 566789999999774
No 118
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=51.71 E-value=2.2 Score=35.91 Aligned_cols=16 Identities=38% Similarity=0.428 Sum_probs=13.5
Q ss_pred eEEEeeccCCCCcceE
Q 035971 97 ATIVACGAKGSGKTRV 112 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyT 112 (614)
.+|+-.|.+|||||+.
T Consensus 7 ~~I~l~G~~GsGKTTi 22 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAI 22 (183)
T ss_dssp EEEEEECSTTSSHHHH
T ss_pred eEEEEECCCCCCHHHH
Confidence 5788889999999953
No 119
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=51.51 E-value=2.7 Score=38.80 Aligned_cols=25 Identities=32% Similarity=0.591 Sum_probs=19.1
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+..+++|.|. ++..+||||||.+.
T Consensus 51 ~ip~il~g~dv--vi~a~TGsGKTlay 75 (238)
T d1wrba1 51 AIPAILEHRDI--MACAQTGSGKTAAF 75 (238)
T ss_dssp HHHHHHTTCCE--EEECCTTSSHHHHH
T ss_pred HhhhhhCCCCE--EEECCCCCCcceee
Confidence 44556789885 66679999999764
No 120
>d2axtu1 a.60.12.2 (U:37-134) Photosystem II 12 kDa extrinsic protein PsbU {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=51.47 E-value=2.8 Score=33.92 Aligned_cols=29 Identities=21% Similarity=0.243 Sum_probs=25.0
Q ss_pred ccCCHHhhccCCCCCHHHHHHHHHHHHhC
Q 035971 553 NTGGKEDLKRLKGIGEKRASYILELREES 581 (614)
Q Consensus 553 N~A~~~~L~~l~gig~~~A~~Ii~~R~~~ 581 (614)
.=.+.+||..++|||++..+.|-+|....
T Consensus 48 pf~s~edL~~V~GIg~~~~e~lk~yl~~f 76 (98)
T d2axtu1 48 PYESVEDVLNIPGLTERQKQILRENLEHF 76 (98)
T ss_dssp CCSSGGGGGGCTTCCTTHHHHHHHHGGGE
T ss_pred CcCCHHHHhhCCCCCHHHHHHHHHHHhcc
Confidence 34578999999999999999999998644
No 121
>d1rxwa1 a.60.7.1 (A:220-324) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=50.36 E-value=3.5 Score=33.42 Aligned_cols=27 Identities=19% Similarity=0.308 Sum_probs=20.9
Q ss_pred hccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 560 LKRLKGIGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 560 L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
.-.|||||++.|-.+|+. |.+++.+.+
T Consensus 18 ~pGV~GIG~ktA~kli~~-------~gsle~i~~ 44 (105)
T d1rxwa1 18 NEGVKGVGVKKALNYIKT-------YGDIFRALK 44 (105)
T ss_dssp BCCCTTCCHHHHHHHHHH-------HSSHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHH-------hCCHHHHHH
Confidence 347999999999999942 447777766
No 122
>d3ci0k1 a.60.16.1 (K:204-274) Pseudopilin GspK {Escherichia coli [TaxId: 562]}
Probab=50.22 E-value=2.8 Score=31.92 Aligned_cols=53 Identities=15% Similarity=0.221 Sum_probs=34.3
Q ss_pred hhhccCCHHh---hcc-C-CCCCHHHHHHHHHHHHhCCCCCCCHHhhhh----cCCCHHHHHHH
Q 035971 550 KLLNTGGKED---LKR-L-KGIGEKRASYILELREESPEPFKNLDDLKD----IGLSAKQIKGM 604 (614)
Q Consensus 550 ~~lN~A~~~~---L~~-l-~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~----~gl~~~~~~~~ 604 (614)
.+|||.+.++ |.+ . .+|...-|++||+-|-.. | |.+++|+.. .|++.+.-+++
T Consensus 3 iNINTL~~~qa~LL~Alf~~~ls~~~A~~li~~RP~~-G-w~sv~~F~~~~~l~~~~~~~~~~~ 64 (71)
T d3ci0k1 3 ININTLDVTQSVILEALFDPWLSPVQARALLQQRPAK-G-WEDVDQFLAQPLLADVDERTKKQL 64 (71)
T ss_dssp EETTTCCGGGTHHHHHHTC-------CCHHHHTCCTT-C-CSCHHHHHTSGGGSSSCHHHHHHH
T ss_pred cccccCCcchHHHHHHHhcCCCCHHHHHHHHHhCCcc-h-hhhHHHHHhChhhcccCHHHHHHh
Confidence 3689888877 333 3 459999999999999876 7 999999965 56765554444
No 123
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=49.47 E-value=2.1 Score=43.72 Aligned_cols=16 Identities=38% Similarity=0.669 Sum_probs=13.8
Q ss_pred EEEeeccCCCCcceEe
Q 035971 98 TIVACGAKGSGKTRVI 113 (614)
Q Consensus 98 tI~aYGqTGSGKTyTm 113 (614)
-|+..||||+|||+..
T Consensus 51 NILliGPTGvGKTlLA 66 (443)
T d1g41a_ 51 NILMIGPTGVGKTEIA 66 (443)
T ss_dssp CEEEECCTTSSHHHHH
T ss_pred cEEEECCCCCCHHHHH
Confidence 5899999999999754
No 124
>d2gy9m1 a.156.1.1 (M:1-114) Ribosomal protein S13 {Escherichia coli [TaxId: 562]}
Probab=49.24 E-value=8.2 Score=31.71 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=28.8
Q ss_pred HhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCHHHHHHHH
Q 035971 558 EDLKRLKGIGEKRASYILELREESPEPFKNLDDLKDIGLSAKQIKGMM 605 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~~~~~~~~ 605 (614)
-.|..|+|||+..|..|++.=.-. |...+.|| +.++++.+-
T Consensus 16 ~ALt~I~GIG~~~A~~Ic~~lgid--~~~kv~~L-----t~~qi~~l~ 56 (114)
T d2gy9m1 16 IALTSIYGVGKTRSKAILAAAGIA--EDVKISEL-----SEGQIDTLR 56 (114)
T ss_dssp HHHTTSSSCCHHHHHHHHHHHTCC--TTSBTTSC-----CHHHHHHHH
T ss_pred EEeeeeeCcCHHHHHHHHHHcCCC--cccccCcc-----cHHHHHHHH
Confidence 468899999999999999765433 45444444 666666654
No 125
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=48.66 E-value=3.8 Score=44.33 Aligned_cols=36 Identities=25% Similarity=0.356 Sum_probs=25.9
Q ss_pred HHHHhhhhHHHHHHHh-cCCceEEEeeccCCCCcceEe
Q 035971 77 GIIFAREVKPLISEVF-NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 77 ~eVf~~~v~plV~~vl-~G~N~tI~aYGqTGSGKTyTm 113 (614)
-.||. ++......++ .|.|.||+.-|.+|||||.+.
T Consensus 106 PHifa-iA~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~ 142 (712)
T d1d0xa2 106 PHIFA-ISDVAYRSMLDDRQNQSLLITGESGAGKTENT 142 (712)
T ss_dssp CCHHH-HHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred CcHHH-HHHHHHHHHHHhCCCceEEEeCCCCCCHHHHH
Confidence 34664 3333333433 699999999999999999886
No 126
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=48.37 E-value=2.3 Score=35.77 Aligned_cols=15 Identities=27% Similarity=0.570 Sum_probs=12.5
Q ss_pred EEEeeccCCCCcceE
Q 035971 98 TIVACGAKGSGKTRV 112 (614)
Q Consensus 98 tI~aYGqTGSGKTyT 112 (614)
-|+-.|++|||||+.
T Consensus 5 iI~l~G~~GsGKsTv 19 (178)
T d1qhxa_ 5 MIILNGGSSAGKSGI 19 (178)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 477889999999954
No 127
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=48.19 E-value=4.4 Score=35.82 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=23.6
Q ss_pred hHHHHHHHhcC---CceEEEeeccCCCCcceEe
Q 035971 84 VKPLISEVFNG---INATIVACGAKGSGKTRVI 113 (614)
Q Consensus 84 v~plV~~vl~G---~N~tI~aYGqTGSGKTyTm 113 (614)
.-|-+|.++.| ....++.+|.+|+|||..+
T Consensus 19 G~~~LD~ll~GGl~~G~l~~i~G~~G~GKT~~~ 51 (258)
T d2i1qa2 19 SSSELDSVLGGGLESQSVTEFAGVFGSGKTQIM 51 (258)
T ss_dssp SCHHHHHHTTSSEETTEEEEEEESTTSSHHHHH
T ss_pred CCHHHHHhcCCCccCCeEEEEEeCCCCCHHHHH
Confidence 34678888887 3667889999999999553
No 128
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=47.69 E-value=3.7 Score=44.89 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=25.9
Q ss_pred HHHHhhhhHHHHHHHh-cCCceEEEeeccCCCCcceEe
Q 035971 77 GIIFAREVKPLISEVF-NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 77 ~eVf~~~v~plV~~vl-~G~N~tI~aYGqTGSGKTyTm 113 (614)
-.||. ++......++ .|.|.||+.-|.+|||||.+.
T Consensus 102 PHiya-vA~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~ 138 (789)
T d1kk8a2 102 PHLFS-VADNAYQNMVTDRENQSCLITGESGAGKTENT 138 (789)
T ss_dssp CCHHH-HHHHHHHHHHHHTSEEEEEEECSTTSSHHHHH
T ss_pred CcHHH-HHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHH
Confidence 34665 3333333333 699999999999999999774
No 129
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=47.60 E-value=3.9 Score=44.79 Aligned_cols=36 Identities=25% Similarity=0.300 Sum_probs=26.7
Q ss_pred HHHHhhhhHHHHHHHh-cCCceEEEeeccCCCCcceEe
Q 035971 77 GIIFAREVKPLISEVF-NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 77 ~eVf~~~v~plV~~vl-~G~N~tI~aYGqTGSGKTyTm 113 (614)
-.||. ++......++ .|.|.||+.-|.+|||||.+.
T Consensus 104 PHifa-iA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~ 140 (794)
T d2mysa2 104 PHIFS-ISDNAYQFMLTDRENQSILITGESGAGKTVNT 140 (794)
T ss_dssp SCHHH-HHHHHHHHHHHHTCCEEEEEEECTTSCHHHHH
T ss_pred CcHHH-HHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHH
Confidence 45775 3444444444 699999999999999999764
No 130
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=47.20 E-value=2.5 Score=35.74 Aligned_cols=15 Identities=40% Similarity=0.689 Sum_probs=12.4
Q ss_pred eEEEeeccCCCCcce
Q 035971 97 ATIVACGAKGSGKTR 111 (614)
Q Consensus 97 ~tI~aYGqTGSGKTy 111 (614)
.-|+..|++|||||+
T Consensus 6 ~~I~i~G~~GsGKTT 20 (174)
T d1y63a_ 6 INILITGTPGTGKTS 20 (174)
T ss_dssp CEEEEECSTTSSHHH
T ss_pred CEEEEEeCCCCCHHH
Confidence 347778999999995
No 131
>d2csba4 a.60.2.4 (A:465-519) Topoisomerase V {Methanopyrus kandleri [TaxId: 2320]}
Probab=47.01 E-value=18 Score=24.66 Aligned_cols=44 Identities=25% Similarity=0.499 Sum_probs=35.6
Q ss_pred HHhhccCCCCCHHHHHHHHHHHHhCCCCC-----CCHHhhhhcCCCHHHHHHH
Q 035971 557 KEDLKRLKGIGEKRASYILELREESPEPF-----KNLDDLKDIGLSAKQIKGM 604 (614)
Q Consensus 557 ~~~L~~l~gig~~~A~~Ii~~R~~~gg~f-----~~~~dL~~~gl~~~~~~~~ 604 (614)
...|..|.||....|+++++. .|| | .-+++|.+-|+...+|..+
T Consensus 3 yaslisirgidreraerllkk---ygg-yskvreagveelredgltdaqirel 51 (55)
T d2csba4 3 YASLISIRGIDRERAERLLKK---YGG-YSKVREAGVEELREDGLTDAQIREL 51 (55)
T ss_dssp HHHHHTSTTCCHHHHHHHHHH---HTS-HHHHHTSCHHHHHHTTCCHHHHHHH
T ss_pred ccceeeeecccHHHHHHHHHH---hcC-hhHHHHhhHHHHHHccccHHHHHHh
Confidence 456889999999999999863 234 4 2478999999999999876
No 132
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.47 E-value=2.8 Score=36.66 Aligned_cols=17 Identities=35% Similarity=0.600 Sum_probs=14.2
Q ss_pred ceEEEeeccCCCCcceE
Q 035971 96 NATIVACGAKGSGKTRV 112 (614)
Q Consensus 96 N~tI~aYGqTGSGKTyT 112 (614)
-..|+..|..|||||+.
T Consensus 14 p~liil~G~pGsGKST~ 30 (172)
T d1yj5a2 14 PEVVVAVGFPGAGKSTF 30 (172)
T ss_dssp CCEEEEECCTTSSHHHH
T ss_pred CEEEEEECCCCCCHHHH
Confidence 35789999999999953
No 133
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=46.45 E-value=2.7 Score=34.62 Aligned_cols=13 Identities=38% Similarity=0.698 Sum_probs=11.0
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+-.|++|||||+
T Consensus 5 I~l~G~~GsGKST 17 (169)
T d1kaga_ 5 IFLVGPMGAGKST 17 (169)
T ss_dssp EEEECCTTSCHHH
T ss_pred EEEECCCCCCHHH
Confidence 6667999999993
No 134
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=46.21 E-value=3.7 Score=35.84 Aligned_cols=17 Identities=29% Similarity=0.366 Sum_probs=12.2
Q ss_pred CCceEEEeeccCCCCcceE
Q 035971 94 GINATIVACGAKGSGKTRV 112 (614)
Q Consensus 94 G~N~tI~aYGqTGSGKTyT 112 (614)
+.|+ | ..++||||||++
T Consensus 23 ~~n~-l-v~~pTGsGKT~i 39 (200)
T d1wp9a1 23 ETNC-L-IVLPTGLGKTLI 39 (200)
T ss_dssp GSCE-E-EECCTTSCHHHH
T ss_pred cCCe-E-EEeCCCCcHHHH
Confidence 4563 3 448999999975
No 135
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=45.84 E-value=2.7 Score=35.42 Aligned_cols=15 Identities=47% Similarity=0.660 Sum_probs=12.2
Q ss_pred EEEeeccCCCCcceE
Q 035971 98 TIVACGAKGSGKTRV 112 (614)
Q Consensus 98 tI~aYGqTGSGKTyT 112 (614)
-|+..|++|||||+.
T Consensus 8 iivl~G~~GsGKsT~ 22 (171)
T d1knqa_ 8 IYVLMGVSGSGKSAV 22 (171)
T ss_dssp EEEEECSTTSCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 466789999999954
No 136
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=45.77 E-value=17 Score=25.10 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhC-CCCCCCHHhhhh-cCCCHHHHHHHHHHHhh
Q 035971 569 KRASYILELREES-PEPFKNLDDLKD-IGLSAKQIKGMMKKEME 610 (614)
Q Consensus 569 ~~A~~Ii~~R~~~-gg~f~~~~dL~~-~gl~~~~~~~~~~~~~~ 610 (614)
.+.++|++|=+++ ..|+ +++||.+ .|+|...+.+++++..+
T Consensus 3 ~ii~~i~~yi~~~~~~~i-tl~~lA~~~~~S~~~l~r~Fk~~~g 45 (54)
T d1d5ya1 3 GIIRDLLIWLEGHLDQPL-SLDNVAAKAGYSKWHLQRMFKDVTG 45 (54)
T ss_dssp HHHHHHHHHHHTTSSSSC-CCHHHHTTTSSCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHccCCCC-CHHHHHHHHCcCHHHHHHHHHHHHC
Confidence 3567778877665 3554 8999999 99999999999998764
No 137
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=45.37 E-value=2.8 Score=35.23 Aligned_cols=14 Identities=43% Similarity=0.719 Sum_probs=11.4
Q ss_pred EEeeccCCCCcceE
Q 035971 99 IVACGAKGSGKTRV 112 (614)
Q Consensus 99 I~aYGqTGSGKTyT 112 (614)
|+..|+.|||||+.
T Consensus 7 I~i~G~pGsGKTTi 20 (173)
T d1rkba_ 7 ILLTGTPGVGKTTL 20 (173)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 56679999999953
No 138
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=44.45 E-value=4.8 Score=43.54 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=26.2
Q ss_pred HHHhhhhHHHHHHHh-cCCceEEEeeccCCCCcceEe
Q 035971 78 IIFAREVKPLISEVF-NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 78 eVf~~~v~plV~~vl-~G~N~tI~aYGqTGSGKTyTm 113 (614)
.||. ++......++ .|.|.||+.-|.+|||||.+.
T Consensus 76 Hif~-vA~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~ 111 (730)
T d1w7ja2 76 HIFA-VAEEAYKQMARDERNQSIIVSGESGAGKTVSA 111 (730)
T ss_dssp CHHH-HHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred cHHH-HHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHH
Confidence 4665 4444444444 599999999999999999875
No 139
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=44.45 E-value=4.8 Score=43.41 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=26.0
Q ss_pred HHHhhhhHHHHHHHh-cCCceEEEeeccCCCCcceEe
Q 035971 78 IIFAREVKPLISEVF-NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 78 eVf~~~v~plV~~vl-~G~N~tI~aYGqTGSGKTyTm 113 (614)
.||. ++......++ .+.|.||+.-|.+|||||.+.
T Consensus 73 Hif~-vA~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~ 108 (710)
T d1br2a2 73 HIYA-IADTAYRSMLQDREDQSILCTGESGAGKTENT 108 (710)
T ss_dssp CHHH-HHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred hHHH-HHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHH
Confidence 4564 3444444444 699999999999999999885
No 140
>d1ee8a1 a.156.1.2 (A:122-210) DNA repair protein MutM (Fpg) {Thermus thermophilus [TaxId: 274]}
Probab=43.86 E-value=11 Score=29.40 Aligned_cols=49 Identities=20% Similarity=0.282 Sum_probs=35.3
Q ss_pred hhhhhcccccchhhhHHHHHhhhccCCHHhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 530 WETFNMRSSGMKNSLVQEYLKLLNTGGKEDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 530 ~~~~~~~~~~~~~~l~~~~~~~lN~A~~~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
++.+..+...+|..|+++- -+.|||-.+|..|+=.-.-+ |++-..+|.+
T Consensus 15 ~~~l~~~~~~ik~~LlDQ~-------------~iaGiGN~y~~EiLf~a~I~--P~~~~~~Ls~ 63 (89)
T d1ee8a1 15 FRGLKESARPLKALLLDQR-------------LAAGVGNIYADEALFRARLS--PFRPARSLTE 63 (89)
T ss_dssp HHHHHTCCSBHHHHHHHSS-------------SSTTCCHHHHHHHHHHTTCC--SSSBGGGCCH
T ss_pred HHHHhcCCCcHHHHHHhcc-------------ccCCCCcHHHHHHHHHHHcC--ccchhhhCCH
Confidence 3444445566666666553 27899999999999776667 9998888744
No 141
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=43.77 E-value=4.1 Score=33.49 Aligned_cols=18 Identities=22% Similarity=0.342 Sum_probs=12.8
Q ss_pred cCCceEEEeeccCCCCcce
Q 035971 93 NGINATIVACGAKGSGKTR 111 (614)
Q Consensus 93 ~G~N~tI~aYGqTGSGKTy 111 (614)
+++.. .+..++||||||+
T Consensus 6 ~~~~~-~ll~apTGsGKT~ 23 (136)
T d1a1va1 6 QSFQV-AHLHAPTGSGKST 23 (136)
T ss_dssp SSCEE-EEEECCTTSCTTT
T ss_pred cCCCE-EEEEeCCCCCHHH
Confidence 34433 4557999999995
No 142
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=43.71 E-value=5 Score=43.07 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=26.1
Q ss_pred HHHhhhhHHHHHHHh-cCCceEEEeeccCCCCcceEe
Q 035971 78 IIFAREVKPLISEVF-NGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 78 eVf~~~v~plV~~vl-~G~N~tI~aYGqTGSGKTyTm 113 (614)
.||. ++......++ .+.|.||+.-|.+|||||.+.
T Consensus 68 Hif~-iA~~Ay~~l~~~~~~QsIiisGeSGsGKTe~~ 103 (684)
T d1lkxa_ 68 HMYA-LANDAYRSMRQSQENQCVIISGESGAGKTEAS 103 (684)
T ss_dssp CHHH-HHHHHHHHHHHHCCCEEEEEECSTTSSHHHHH
T ss_pred hHHH-HHHHHHHHHHHcCCCeEEEEEcCCCCCHHHHH
Confidence 5665 3444444443 689999999999999999875
No 143
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=42.87 E-value=2.3 Score=42.17 Aligned_cols=15 Identities=33% Similarity=0.756 Sum_probs=13.5
Q ss_pred EEeeccCCCCcceEe
Q 035971 99 IVACGAKGSGKTRVI 113 (614)
Q Consensus 99 I~aYGqTGSGKTyTm 113 (614)
++.+|.||||||++|
T Consensus 53 ~~I~G~tGsGKT~~l 67 (433)
T d1e9ra_ 53 LLVNGATGTGKSVLL 67 (433)
T ss_dssp EEEEECTTSSHHHHH
T ss_pred EEEEeCCCCcHHHHH
Confidence 688999999999876
No 144
>d1b22a_ a.60.4.1 (A:) DNA repair protein Rad51, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.54 E-value=6.6 Score=29.57 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=31.6
Q ss_pred cCCCCCHHHHHHHHHHHHhCCCCCCCH--------Hhhhh-cCCCHHHHHHHHHHH
Q 035971 562 RLKGIGEKRASYILELREESPEPFKNL--------DDLKD-IGLSAKQIKGMMKKE 608 (614)
Q Consensus 562 ~l~gig~~~A~~Ii~~R~~~gg~f~~~--------~dL~~-~gl~~~~~~~~~~~~ 608 (614)
.++|||+..++.+.+ . | |.++ +||.+ .|++.+.+++++..+
T Consensus 14 ~~~Gig~~~i~kL~~----a-G-~~Tv~~i~~at~~~L~~i~G~~e~~A~KIi~~a 63 (70)
T d1b22a_ 14 EQCGINANDVKKLEE----A-G-FHTVEAVAYAPKKELINIKGISEAKADKILAEA 63 (70)
T ss_dssp HHTTCSHHHHHHHHT----T-C-CSSGGGBTSSBHHHHHTTTTCSTTHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHH----c-C-cchHHHHHhCCHHHHHHcCCCCHHHHHHHHHHH
Confidence 458999999987753 2 4 7655 56777 899999999998754
No 145
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=42.53 E-value=3.4 Score=39.74 Aligned_cols=41 Identities=20% Similarity=0.347 Sum_probs=25.1
Q ss_pred eeEeeeeecCCCChHHHHhhhhHHHHHHHh-cCCceEEEeeccCCCCcceE
Q 035971 63 CYKLDYCYEQNEGNGIIFAREVKPLISEVF-NGINATIVACGAKGSGKTRV 112 (614)
Q Consensus 63 ~F~FD~VF~~~asQ~eVf~~~v~plV~~vl-~G~N~tI~aYGqTGSGKTyT 112 (614)
.|.|..|++++ + ....++-.+. .|. .-|+.+|+.|+|||..
T Consensus 3 ~~~f~~I~Gq~----~----~kral~laa~~~~~-h~vLl~G~pG~GKT~l 44 (333)
T d1g8pa_ 3 VFPFSAIVGQE----D----MKLALLLTAVDPGI-GGVLVFGDRGTGKSTA 44 (333)
T ss_dssp CCCGGGSCSCH----H----HHHHHHHHHHCGGG-CCEEEECCGGGCTTHH
T ss_pred CCChhhccCcH----H----HHHHHHHHHhccCC-CeEEEECCCCccHHHH
Confidence 36777788753 2 2233333333 232 3479999999999944
No 146
>d2duya1 a.60.2.7 (A:11-75) Uncharacterized protein TTHA1967 {Thermus thermophilus [TaxId: 274]}
Probab=42.40 E-value=9.4 Score=28.07 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=25.4
Q ss_pred hhhhHHHHHhhhccCCHHhhccCCCCCHHHHHHHHHH
Q 035971 541 KNSLVQEYLKLLNTGGKEDLKRLKGIGEKRASYILEL 577 (614)
Q Consensus 541 ~~~l~~~~~~~lN~A~~~~L~~l~gig~~~A~~Ii~~ 577 (614)
-..+.+..+..=.=.+.+||..++|||++..+.|-.|
T Consensus 26 g~~~A~~Iv~~R~f~s~edL~~v~gi~~~~~~~i~~~ 62 (65)
T d2duya1 26 GPVLARRIVEGRPYARVEDLLKVKGIGPATLERLRPY 62 (65)
T ss_dssp CHHHHHHHHHTCCCSSGGGGGGSTTCCHHHHHHHGGG
T ss_pred CHHHHHHHHHcCCCCCHHHHHhCCCCCHHHHHHHHHH
Confidence 3333333333334567899999999999999988543
No 147
>d2uubm1 a.156.1.1 (M:2-126) Ribosomal protein S13 {Thermus thermophilus [TaxId: 274]}
Probab=42.16 E-value=9 Score=31.98 Aligned_cols=41 Identities=27% Similarity=0.377 Sum_probs=27.9
Q ss_pred HhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCHHHHHHHH
Q 035971 558 EDLKRLKGIGEKRASYILELREESPEPFKNLDDLKDIGLSAKQIKGMM 605 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~~~~~~~~ 605 (614)
-.|..|+|||+..|..|.+.=.-. |..-+.+| +.+++++|-
T Consensus 16 ~ALt~I~GIG~~~A~~Ic~~lgId--~~~k~~~L-----t~~qi~~I~ 56 (125)
T d2uubm1 16 VALTYIYGIGKARAKEALEKTGIN--PATRVKDL-----TEAEVVRLR 56 (125)
T ss_dssp HHHTTSTTCCHHHHHHHHHTTTCC--TTSBGGGC-----CHHHHHHHH
T ss_pred EeeeeeeCcCHHHHHHHHHHcCCC--cccccccc-----cHHHHHHHH
Confidence 468899999999999999843222 44444444 566665554
No 148
>d1r2za1 a.156.1.2 (A:135-228) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=41.46 E-value=14 Score=29.07 Aligned_cols=37 Identities=22% Similarity=0.206 Sum_probs=29.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCHHHHHHHHH
Q 035971 563 LKGIGEKRASYILELREESPEPFKNLDDLKDIGLSAKQIKGMMK 606 (614)
Q Consensus 563 l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~~~~~~~~~ 606 (614)
+.|||-.+|..|+=.-.-+ |++-..+| +.++++++..
T Consensus 35 ~aGiGN~y~~EiLf~a~I~--P~~~~~~L-----s~~e~~~L~~ 71 (94)
T d1r2za1 35 VAGFGNIYVDESLFRAGIL--PGRPAASL-----SSKEIERLHE 71 (94)
T ss_dssp SSSCCHHHHHHHHHHHTCC--TTSBGGGC-----CHHHHHHHHH
T ss_pred cCCcccHHHHHHHHHHHhh--hhhhHHHh-----hHHHHHHHHH
Confidence 7899999999999777777 99888877 4455555543
No 149
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=41.46 E-value=3.7 Score=35.92 Aligned_cols=15 Identities=33% Similarity=0.589 Sum_probs=12.6
Q ss_pred eEEEeeccCCCCcce
Q 035971 97 ATIVACGAKGSGKTR 111 (614)
Q Consensus 97 ~tI~aYGqTGSGKTy 111 (614)
..|+-.|++|||||+
T Consensus 9 ~iI~i~GppGSGKsT 23 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGT 23 (196)
T ss_dssp EEEEEECSTTSSHHH
T ss_pred cEEEEECCCCCCHHH
Confidence 457888999999984
No 150
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=41.40 E-value=5.8 Score=39.00 Aligned_cols=24 Identities=25% Similarity=0.411 Sum_probs=16.5
Q ss_pred HHHHhcCCceEEEeeccCCCCcceEe
Q 035971 88 ISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 88 V~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
+..++.+ ...+-.|+.|||||+|+
T Consensus 157 ~~~al~~--~~~vI~G~pGTGKTt~i 180 (359)
T d1w36d1 157 AAVALTR--RISVISGGPGTGKTTTV 180 (359)
T ss_dssp HHHHHTB--SEEEEECCTTSTHHHHH
T ss_pred HHHHHcC--CeEEEEcCCCCCceehH
Confidence 3344443 34555699999999987
No 151
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=41.15 E-value=3.4 Score=36.07 Aligned_cols=14 Identities=36% Similarity=0.527 Sum_probs=12.0
Q ss_pred EEeeccCCCCcceE
Q 035971 99 IVACGAKGSGKTRV 112 (614)
Q Consensus 99 I~aYGqTGSGKTyT 112 (614)
|+-.|+.|||||+.
T Consensus 6 I~i~GppGsGKsT~ 19 (189)
T d1zaka1 6 VMISGAPASGKGTQ 19 (189)
T ss_dssp EEEEESTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 77889999999853
No 152
>d1wuda1 a.60.8.1 (A:530-606) HRDC domain from RecQ helicase {Escherichia coli [TaxId: 562]}
Probab=41.09 E-value=6.5 Score=29.87 Aligned_cols=33 Identities=9% Similarity=0.213 Sum_probs=24.1
Q ss_pred chhhhHHHHHhhhccCCHHhhccCCCCCHHHHHH
Q 035971 540 MKNSLVQEYLKLLNTGGKEDLKRLKGIGEKRASY 573 (614)
Q Consensus 540 ~~~~l~~~~~~~lN~A~~~~L~~l~gig~~~A~~ 573 (614)
+.+..+.+... ....|.++|..|+|||+.++++
T Consensus 29 ~~d~~L~~ia~-~~P~s~~~L~~I~G~g~~k~~~ 61 (77)
T d1wuda1 29 FNDATLIEMAE-QMPITASEMLSVNGVGMRKLER 61 (77)
T ss_dssp CCHHHHHHHHH-HCCCSHHHHHTSTTCCHHHHHH
T ss_pred eCHHHHHHHHH-HCCCCHHHHhCCCCCCHHHHHH
Confidence 34444444444 4688999999999999998764
No 153
>d1zeta2 e.8.1.7 (A:27-299) DNA polymerase iota {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.06 E-value=16 Score=34.05 Aligned_cols=42 Identities=26% Similarity=0.413 Sum_probs=32.6
Q ss_pred hhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCHHHHHHHHHHH
Q 035971 559 DLKRLKGIGEKRASYILELREESPEPFKNLDDLKDIGLSAKQIKGMMKKE 608 (614)
Q Consensus 559 ~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~~~~~~~~~~~ 608 (614)
.+..|||||.++++++ +.. | +.++.||.++ +.+.+.+.|...
T Consensus 209 pv~~l~GiG~~~~~~L----~~~-G-I~ti~dl~~~--~~~~L~~~fG~~ 250 (273)
T d1zeta2 209 HIKEIPGIGYKTAKCL----EAL-G-INSVRDLQTF--SPKILEKELGIS 250 (273)
T ss_dssp SGGGSTTCCHHHHHHH----HTT-T-CCSHHHHHHS--CHHHHHHHHHHH
T ss_pred chHHhcCCCHHHHHHH----HHh-C-CCcHHHHhcC--CHHHHHHHHCHH
Confidence 4567999999999875 235 5 8999999885 678888887643
No 154
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=40.53 E-value=4.4 Score=36.95 Aligned_cols=17 Identities=29% Similarity=0.600 Sum_probs=14.3
Q ss_pred ceEEEeeccCCCCcceE
Q 035971 96 NATIVACGAKGSGKTRV 112 (614)
Q Consensus 96 N~tI~aYGqTGSGKTyT 112 (614)
.-.++-||+.|+|||.+
T Consensus 34 ~~~~Ll~Gp~G~GKtt~ 50 (239)
T d1njfa_ 34 HHAYLFSGTRGVGKTSI 50 (239)
T ss_dssp CSEEEEECSTTSSHHHH
T ss_pred CeeEEEECCCCCcHHHH
Confidence 44689999999999954
No 155
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=40.30 E-value=5.9 Score=35.45 Aligned_cols=28 Identities=18% Similarity=0.318 Sum_probs=20.3
Q ss_pred HHHHHHhcCC-ceEEEeeccCCCCcceEe
Q 035971 86 PLISEVFNGI-NATIVACGAKGSGKTRVI 113 (614)
Q Consensus 86 plV~~vl~G~-N~tI~aYGqTGSGKTyTm 113 (614)
.++..+-.|. .-+++-||+.|+|||.+.
T Consensus 13 ~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a 41 (207)
T d1a5ta2 13 KLVASYQAGRGHHALLIQALPGMGDDALI 41 (207)
T ss_dssp HHHHHHHTTCCCSEEEEECCTTSCHHHHH
T ss_pred HHHHHHHcCCcCeEEEEECCCCCcHHHHH
Confidence 4445555555 667999999999999654
No 156
>d2e1fa1 a.60.8.1 (A:1142-1235) Werner syndrome ATP-dependent helicase, WRN {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.97 E-value=6.9 Score=31.02 Aligned_cols=40 Identities=23% Similarity=0.434 Sum_probs=28.0
Q ss_pred hhhhHHHHHhhhccCCHHhhccCCCCCHHHHH-------HHHHHHHhC
Q 035971 541 KNSLVQEYLKLLNTGGKEDLKRLKGIGEKRAS-------YILELREES 581 (614)
Q Consensus 541 ~~~l~~~~~~~lN~A~~~~L~~l~gig~~~A~-------~Ii~~R~~~ 581 (614)
.+..+.+... .--.|.++|..|+|+|+.+++ .|.+|=+++
T Consensus 39 ~d~~L~~ia~-~~P~t~~eL~~I~G~g~~k~~kyG~~l~~I~~~~~e~ 85 (94)
T d2e1fa1 39 TNKILVDMAK-MRPTTVENVKRIDGVSEGKAAMLAPLLEVIKHFCQTN 85 (94)
T ss_dssp CHHHHHHHHH-HCCCSHHHHTTSTTCCHHHHHHTHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHH-cCCCCHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 3344444433 567899999999999999875 455665555
No 157
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=39.89 E-value=3.6 Score=35.89 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=12.8
Q ss_pred eEEEeeccCCCCcce
Q 035971 97 ATIVACGAKGSGKTR 111 (614)
Q Consensus 97 ~tI~aYGqTGSGKTy 111 (614)
-.|+..|+.|||||+
T Consensus 7 ~iI~i~G~pGSGKsT 21 (194)
T d1qf9a_ 7 NVVFVLGGPGSGKGT 21 (194)
T ss_dssp EEEEEEESTTSSHHH
T ss_pred cEEEEECCCCCCHHH
Confidence 357889999999994
No 158
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=39.87 E-value=5.6 Score=34.92 Aligned_cols=27 Identities=26% Similarity=0.491 Sum_probs=19.7
Q ss_pred HHHHHHhcC---CceEEEeeccCCCCcceE
Q 035971 86 PLISEVFNG---INATIVACGAKGSGKTRV 112 (614)
Q Consensus 86 plV~~vl~G---~N~tI~aYGqTGSGKTyT 112 (614)
+-+|.++.| ....+.-||.+|+|||..
T Consensus 13 ~~LD~~l~GGi~~G~~~~I~G~~G~GKT~l 42 (242)
T d1tf7a1 13 EGFDDISHGGLPIGRSTLVSGTSGTGKTLF 42 (242)
T ss_dssp TTHHHHTTSSEETTSEEEEEESTTSSHHHH
T ss_pred HHHHHhhcCCCcCCeEEEEEeCCCCCHHHH
Confidence 346677763 455788889999999943
No 159
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=39.20 E-value=4.4 Score=34.15 Aligned_cols=18 Identities=33% Similarity=0.508 Sum_probs=14.0
Q ss_pred ceEEEeeccCCCCcceEe
Q 035971 96 NATIVACGAKGSGKTRVI 113 (614)
Q Consensus 96 N~tI~aYGqTGSGKTyTm 113 (614)
|-.|+-.|..|||||+..
T Consensus 1 ~kiI~i~G~~GsGKsT~~ 18 (190)
T d1khta_ 1 NKVVVVTGVPGVGSTTSS 18 (190)
T ss_dssp CCEEEEECCTTSCHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 345788899999999643
No 160
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=39.12 E-value=3 Score=35.53 Aligned_cols=15 Identities=40% Similarity=0.764 Sum_probs=12.5
Q ss_pred EEeeccCCCCcceEe
Q 035971 99 IVACGAKGSGKTRVI 113 (614)
Q Consensus 99 I~aYGqTGSGKTyTm 113 (614)
|+--|++|+|||+.+
T Consensus 3 i~I~G~~G~GKSTLl 17 (178)
T d1ye8a1 3 IIITGEPGVGKTTLV 17 (178)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCcHHHHHH
Confidence 677899999999654
No 161
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=39.04 E-value=3.9 Score=34.43 Aligned_cols=15 Identities=33% Similarity=0.691 Sum_probs=12.5
Q ss_pred EEEeeccCCCCcceE
Q 035971 98 TIVACGAKGSGKTRV 112 (614)
Q Consensus 98 tI~aYGqTGSGKTyT 112 (614)
.|+-.|++|||||+.
T Consensus 6 iI~l~G~~GsGKSTi 20 (176)
T d1zp6a1 6 ILLLSGHPGSGKSTI 20 (176)
T ss_dssp EEEEEECTTSCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 477889999999953
No 162
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=38.78 E-value=14 Score=27.51 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 568 EKRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 568 ~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
..++++|-+.|+.. | + +.++|.+ +|++...+.+|.++
T Consensus 7 ~~ig~~lr~~R~~~-g-~-sq~~lA~~~gis~~~i~~~E~g 44 (79)
T d1y9qa1 7 SQIANQLKNLRKSR-G-L-SLDATAQLTGVSKAMLGQIERG 44 (79)
T ss_dssp HHHHHHHHHHHHHT-T-C-CHHHHHHHHSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHc-C-C-CHHHHHHHHCcchhHHHHHHcC
Confidence 35789999999999 4 6 9999999 99999999999765
No 163
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=38.77 E-value=6.5 Score=38.70 Aligned_cols=16 Identities=31% Similarity=0.281 Sum_probs=14.1
Q ss_pred eEEEeeccCCCCcceE
Q 035971 97 ATIVACGAKGSGKTRV 112 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyT 112 (614)
-|++-||++|+|||+.
T Consensus 155 ~~~~~~g~~~~gk~~~ 170 (362)
T d1svma_ 155 RYWLFKGPIDSGKTTL 170 (362)
T ss_dssp CEEEEECSTTSSHHHH
T ss_pred CeEEEECCCCCCHHHH
Confidence 4899999999999954
No 164
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=38.46 E-value=7.5 Score=37.38 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=13.8
Q ss_pred eEEEeeccCCCCcceEe
Q 035971 97 ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyTm 113 (614)
++++-+|+||+|||++.
T Consensus 54 ~~~lf~Gp~G~GKt~la 70 (315)
T d1qvra3 54 GSFLFLGPTGVGKTELA 70 (315)
T ss_dssp EEEEEBSCSSSSHHHHH
T ss_pred eEEEEECCCcchHHHHH
Confidence 36777799999999764
No 165
>d2abka_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=37.94 E-value=13 Score=33.57 Aligned_cols=54 Identities=24% Similarity=0.339 Sum_probs=40.9
Q ss_pred cCCHHhhcc-CCCCCH--HHHHHHHH----HHHhCCCCC-CCHHhhhh-cCCCHHHHHHHHHH
Q 035971 554 TGGKEDLKR-LKGIGE--KRASYILE----LREESPEPF-KNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 554 ~A~~~~L~~-l~gig~--~~A~~Ii~----~R~~~gg~f-~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
.|+.++|.. |.|+|- .+|++|.+ ..+++||.+ .+.++|.. .|++.+++.-++.-
T Consensus 66 ~a~~~~l~~~i~~~G~y~~Ka~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGVG~~TA~~Il~~ 128 (211)
T d2abka_ 66 ELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNT 128 (211)
T ss_dssp HHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHTTTSCCSCHHHHHHSTTCCHHHHHHHHHH
T ss_pred hhhHhHhHHHHHHhhhhhhHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHhhchHHHHHHHHH
Confidence 456666654 789997 47766653 455677777 78999999 99999999988864
No 166
>d1r69a_ a.35.1.2 (A:) 434 C1 repressor, DNA-binding domain {Bacteriophage 434 [TaxId: 10712]}
Probab=37.62 E-value=14 Score=26.23 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 570 RASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 570 ~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
++++|-+.|+.. | + +.+||.+ +|++...+.+|.++
T Consensus 2 ig~rik~~R~~~-g-~-sq~elA~~~gvs~~~is~~E~g 37 (63)
T d1r69a_ 2 ISSRVKSKRIQL-G-L-NQAELAQKVGTTQQSIEQLENG 37 (63)
T ss_dssp HHHHHHHHHHHT-T-C-CHHHHHHHHTSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHc-C-C-cHHHHHHHhCcCHHHHHHHHCC
Confidence 567888889888 3 4 8888988 99999998888654
No 167
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=37.46 E-value=2.6 Score=41.71 Aligned_cols=22 Identities=23% Similarity=0.314 Sum_probs=17.4
Q ss_pred CCceEEEeeccCCCCcceEeec
Q 035971 94 GINATIVACGAKGSGKTRVIQG 115 (614)
Q Consensus 94 G~N~tI~aYGqTGSGKTyTm~G 115 (614)
-.++.++.-+..||||||||.+
T Consensus 14 p~~g~~lv~A~AGsGKT~~l~~ 35 (485)
T d1w36b1 14 PLQGERLIEASAGTGKTFTIAA 35 (485)
T ss_dssp CCSSCEEEECCTTSCHHHHHHH
T ss_pred CCCCCeEEEEcCchHHHHHHHH
Confidence 4556677888999999999853
No 168
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=36.98 E-value=16 Score=26.59 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 569 KRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 569 ~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
.++++|-+.|++. | + +.+||.+ +|++...+.+|-++
T Consensus 9 ~~g~~ik~~R~~~-g-l-tq~~lA~~~gis~~~i~~~E~g 45 (69)
T d1y7ya1 9 KFGQRLRELRTAK-G-L-SQETLAFLSGLDRSYVGGVERG 45 (69)
T ss_dssp HHHHHHHHHHHHT-T-C-CHHHHHHHHTCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHc-C-C-CHHHHHhHhCCCHHHHHHHHCC
Confidence 4688999999999 4 5 9999999 99999999998654
No 169
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=36.37 E-value=5.7 Score=34.44 Aligned_cols=16 Identities=38% Similarity=0.515 Sum_probs=13.7
Q ss_pred eEEEeeccCCCCcceE
Q 035971 97 ATIVACGAKGSGKTRV 112 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyT 112 (614)
..|+..|.+|||||+.
T Consensus 3 ~li~l~GlpgsGKSTl 18 (213)
T d1bifa1 3 TLIVMVGLPARGKTYI 18 (213)
T ss_dssp EEEEEECCTTSSHHHH
T ss_pred EEEEEECCCCCCHHHH
Confidence 4588999999999964
No 170
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=36.10 E-value=17 Score=26.85 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 568 EKRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 568 ~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
..++++|=++|+.+ | + +.++|.+ .|++...+.+|.++
T Consensus 9 ~~~g~~ik~~R~~~-g-l-tq~~lA~~~gis~~~i~~~e~g 46 (77)
T d2b5aa1 9 RKFGRTLKKIRTQK-G-V-SQEELADLAGLHRTYISEVERG 46 (77)
T ss_dssp HHHHHHHHHHHHHT-T-C-CHHHHHHHHTCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHc-C-C-CHHHHHHHHCCCHHHHHHHHcC
Confidence 35688899999998 4 4 8999999 99999999998765
No 171
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=35.70 E-value=17 Score=26.43 Aligned_cols=38 Identities=11% Similarity=0.158 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHHH
Q 035971 568 EKRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKKE 608 (614)
Q Consensus 568 ~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~~ 608 (614)
..++.+|.++|+..|= +..||.+ .|++...|.+|..+.
T Consensus 5 ~~l~~~i~~~r~~~gl---tq~elA~~~gv~~~~is~ie~g~ 43 (69)
T d2a6ca1 5 SQLLIVLQEHLRNSGL---TQFKAAELLGVTQPRVSDLMRGK 43 (69)
T ss_dssp HHHHHHHHHHHHTTTC---CHHHHHHHHTSCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC---CHHHHHHHHHcCHhHHHHHHccc
Confidence 3578899999999843 8999999 999999999998754
No 172
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=35.68 E-value=3.9 Score=34.35 Aligned_cols=15 Identities=33% Similarity=0.565 Sum_probs=12.7
Q ss_pred EEEeeccCCCCcceE
Q 035971 98 TIVACGAKGSGKTRV 112 (614)
Q Consensus 98 tI~aYGqTGSGKTyT 112 (614)
-|+-.|++|||||..
T Consensus 9 ~I~i~G~~GsGKTTl 23 (192)
T d1lw7a2 9 TVAILGGESSGKSVL 23 (192)
T ss_dssp EEEEECCTTSHHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 478899999999954
No 173
>d2d6fc1 a.182.1.2 (C:445-503) Glutamyl-tRNA(Gln) amidotransferase subunit E, GatE, C-terminal domain {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=35.48 E-value=6.2 Score=28.60 Aligned_cols=50 Identities=20% Similarity=0.308 Sum_probs=33.5
Q ss_pred HhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCHHHHHHHHHHHhhhh
Q 035971 558 EDLKRLKGIGEKRASYILELREESPEPFKNLDDLKDIGLSAKQIKGMMKKEMECL 612 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~~~~~~~~~~~~~~~ 612 (614)
+-++.=.||.+.-|+-|+..+... -| +++...|.+++.+.+|+..++.+|
T Consensus 8 ~R~~~eygLs~~dA~~L~~~~~~~--~F---Ee~v~~~~~pk~~Anwi~~~l~~L 57 (59)
T d2d6fc1 8 ERIMRDYGLSEDLASQLVKRNLVD--EF---EALTEFRVDTTVIASLLAYTLREL 57 (59)
T ss_dssp HHHHHTTCCCHHHHHHHHHTTCTT--TC-----------CCHHHHHTTTTHHHHH
T ss_pred HHHHHHcCcCHHHHHHHHcCchHH--HH---HHHHHhCCCHHHHHHHHHHHHHHh
Confidence 345556799999999999887543 34 677778999999999999888765
No 174
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=35.15 E-value=4.6 Score=38.04 Aligned_cols=31 Identities=19% Similarity=0.298 Sum_probs=24.5
Q ss_pred hhHHHHHHHhc-C---CceEEEeeccCCCCcceEe
Q 035971 83 EVKPLISEVFN-G---INATIVACGAKGSGKTRVI 113 (614)
Q Consensus 83 ~v~plV~~vl~-G---~N~tI~aYGqTGSGKTyTm 113 (614)
+..+.+|.+|. | ....+.-||++|||||+.+
T Consensus 37 TG~~~lD~~Lg~GGi~~g~itei~G~~gsGKTtl~ 71 (263)
T d1u94a1 37 TGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLT 71 (263)
T ss_dssp CSCHHHHHHTSSSSEETTSEEEEECSTTSSHHHHH
T ss_pred cCCHHHHHHhcCCCccCceEEEEecCCCcHHHHHH
Confidence 45677888885 4 4567899999999999764
No 175
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=34.88 E-value=8 Score=34.70 Aligned_cols=28 Identities=21% Similarity=0.181 Sum_probs=19.6
Q ss_pred hHHHHHHHhcC-CceEEEeeccCCCCcce
Q 035971 84 VKPLISEVFNG-INATIVACGAKGSGKTR 111 (614)
Q Consensus 84 v~plV~~vl~G-~N~tI~aYGqTGSGKTy 111 (614)
+......-+.| ...+|+-.|.+|||||+
T Consensus 11 ~~~~~r~~~~~~kg~vIwltGlsGsGKTT 39 (208)
T d1m7ga_ 11 LTRSERTELRNQRGLTIWLTGLSASGKST 39 (208)
T ss_dssp CCHHHHHHHHTSSCEEEEEECSTTSSHHH
T ss_pred cCHHHHHHHhCCCCeEEEEECCCCCCHHH
Confidence 33434444444 66789999999999994
No 176
>d1x57a1 a.35.1.12 (A:8-85) Endothelial differentiation-related factor 1, EDF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.83 E-value=18 Score=27.11 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 566 IGEKRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 566 ig~~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
|...++++|-++|+.. | + +-.||.+ .|++...+.+|-++
T Consensus 3 ~~~~iG~~I~~~R~~~-g-l-tq~~lA~~~gis~~~is~~E~G 42 (78)
T d1x57a1 3 VTLEVGKVIQQGRQSK-G-L-TQKDLATKINEKPQVIADYESG 42 (78)
T ss_dssp CCCHHHHHHHHHHHTT-T-C-CHHHHHHHHTSCHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHc-C-C-ChhHHHHcCCCCHHHHHHHHcc
Confidence 3446889999999999 4 4 9999999 99999999998664
No 177
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=34.74 E-value=13 Score=26.80 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 570 RASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 570 ~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
++++|-+.|++. | + +..||.+ +|++...+.+|.++
T Consensus 4 ig~rik~~R~~~-g-~-tq~~lA~~~gvs~~~i~~~e~g 39 (66)
T d2r1jl1 4 MGERIRARRKKL-K-I-RQAALGKMVGVSNVAISQWERS 39 (66)
T ss_dssp HHHHHHHHHHHH-T-C-CHHHHHHHHTSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHc-C-C-CHHHHHHHHCCCHHHHHHHHcC
Confidence 678899999998 4 5 8999999 99999999998764
No 178
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.70 E-value=5.1 Score=34.77 Aligned_cols=13 Identities=31% Similarity=0.629 Sum_probs=11.5
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+-.|+.|||||+
T Consensus 4 I~i~GppGSGKsT 16 (194)
T d1teva_ 4 VFVLGGPGAGKGT 16 (194)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7889999999983
No 179
>d1tdza1 a.156.1.2 (A:132-219) DNA repair protein MutM (Fpg) {Lactococcus lactis [TaxId: 1358]}
Probab=34.67 E-value=7.2 Score=30.52 Aligned_cols=29 Identities=24% Similarity=0.358 Sum_probs=24.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 563 LKGIGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 563 l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
++|||-.+|..|+=.-.-| |++-..+|.+
T Consensus 35 iaGIGNiy~~EiLf~a~I~--P~~~~~~Ls~ 63 (88)
T d1tdza1 35 VAGLGNIYVDEVLWLAKIH--PEKETNQLIE 63 (88)
T ss_dssp SSCCCHHHHHHHHHHTTCC--TTCBGGGCCH
T ss_pred cCCcChHHHHHHHHHHHcC--ccchhhHcCH
Confidence 7999999999999776667 8988887744
No 180
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=34.65 E-value=20 Score=25.56 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 570 RASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 570 ~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
++++|-++|+.. | + +.+||.+ +|++...|.+|-++
T Consensus 4 i~~rlr~~R~~~-g-l-tq~~lA~~~gvs~~ti~~~E~g 39 (65)
T d2croa_ 4 LSERLKKRRIAL-K-M-TQTELATKAGVKQQSIQLIEAG 39 (65)
T ss_dssp HHHHHHHHHHHT-T-C-CHHHHHHHHTSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHc-C-C-CHHHHHHHHCcCHhHHHHHHCC
Confidence 678888999988 4 4 7999999 99999999988653
No 181
>d2hkja1 a.156.1.3 (A:229-306) Topoisomerase VI-B subunit middle domain {Archaeon Sulfolobus shibatae [TaxId: 2286]}
Probab=34.14 E-value=25 Score=26.29 Aligned_cols=38 Identities=29% Similarity=0.524 Sum_probs=29.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCHHHHHHHHHH
Q 035971 563 LKGIGEKRASYILELREESPEPFKNLDDLKDIGLSAKQIKGMMKK 607 (614)
Q Consensus 563 l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~~~~~~~~~~ 607 (614)
+.|||...|+.|+..=.-+ |.+...+| +.+++.+|...
T Consensus 34 f~GvGn~~a~Eil~~agi~--P~~~~~~L-----~~~e~~~L~~a 71 (78)
T d2hkja1 34 FQSIGDTTADKILELAGLK--PNKKVKNL-----TEEEITRLVET 71 (78)
T ss_dssp SSSCCHHHHHHHHHHHTCC--TTSBGGGC-----CHHHHHHHHHH
T ss_pred hcccCHHHHHHHHHHhCCC--cccccccC-----CHHHHHHHHHH
Confidence 7899999999999966555 77776665 66777777654
No 182
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=33.93 E-value=5.5 Score=34.77 Aligned_cols=15 Identities=40% Similarity=0.601 Sum_probs=12.7
Q ss_pred eEEEeeccCCCCcce
Q 035971 97 ATIVACGAKGSGKTR 111 (614)
Q Consensus 97 ~tI~aYGqTGSGKTy 111 (614)
-.|+..|++||||++
T Consensus 9 ~iI~l~G~pGSGKsT 23 (194)
T d3adka_ 9 KIIFVVGGPGSGKGT 23 (194)
T ss_dssp CEEEEEECTTSSHHH
T ss_pred cEEEEECCCCCCHHH
Confidence 458889999999984
No 183
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=33.92 E-value=5.4 Score=34.02 Aligned_cols=13 Identities=38% Similarity=0.644 Sum_probs=11.4
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+-.|+.|||||+
T Consensus 3 I~i~G~pGSGKsT 15 (182)
T d1zina1 3 LVLMGLPGAGKGT 15 (182)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6779999999984
No 184
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=33.60 E-value=11 Score=35.89 Aligned_cols=17 Identities=35% Similarity=0.610 Sum_probs=14.0
Q ss_pred eEEEeeccCCCCcceEe
Q 035971 97 ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyTm 113 (614)
+.++-.|+||+|||+..
T Consensus 53 ~~~lf~Gp~GvGKT~la 69 (315)
T d1r6bx3 53 GSFLFAGPTGVGKTEVT 69 (315)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECCCcchhHHHH
Confidence 46778899999999764
No 185
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.45 E-value=5.5 Score=34.24 Aligned_cols=13 Identities=31% Similarity=0.634 Sum_probs=10.9
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+-.|+.|||||+
T Consensus 3 I~i~G~pGsGKsT 15 (181)
T d2cdna1 3 VLLLGPPGAGKGT 15 (181)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 5667999999985
No 186
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=32.96 E-value=9.6 Score=33.90 Aligned_cols=25 Identities=40% Similarity=0.426 Sum_probs=18.0
Q ss_pred HHHHhcCCceEEEeeccCCCCcceEe
Q 035971 88 ISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 88 V~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
+..+++|.+ .+++..+||||||...
T Consensus 35 ip~~l~g~~-d~iv~a~TGsGKT~~~ 59 (208)
T d1hv8a1 35 IPLFLNDEY-NIVAQARTGSGKTASF 59 (208)
T ss_dssp HHHHHHTCS-EEEEECCSSSSHHHHH
T ss_pred HHHHHcCCC-Ceeeechhccccccee
Confidence 455567643 3678889999999864
No 187
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=32.55 E-value=4.6 Score=34.36 Aligned_cols=17 Identities=29% Similarity=0.544 Sum_probs=14.4
Q ss_pred eEEEeeccCCCCcceEe
Q 035971 97 ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyTm 113 (614)
+||...|.+|+|||..+
T Consensus 1 a~V~liG~~n~GKSsLi 17 (171)
T d1mkya1 1 ATVLIVGRPNVGKSTLF 17 (171)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 58999999999999543
No 188
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=32.37 E-value=5.9 Score=34.13 Aligned_cols=13 Identities=46% Similarity=0.675 Sum_probs=11.2
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+-.|+.|||||+
T Consensus 3 I~i~G~pGSGKsT 15 (182)
T d1s3ga1 3 IVLMGLPGAGKGT 15 (182)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6678999999984
No 189
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=31.45 E-value=6 Score=33.93 Aligned_cols=13 Identities=38% Similarity=0.491 Sum_probs=10.8
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+-.|+.|||||+
T Consensus 3 I~i~G~pGSGKsT 15 (179)
T d1e4va1 3 IILLGAPVAGKGT 15 (179)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 5567999999984
No 190
>d1jx4a2 e.8.1.7 (A:1-240) DinB homolog (DBH) {Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]}
Probab=30.80 E-value=28 Score=31.62 Aligned_cols=39 Identities=26% Similarity=0.438 Sum_probs=28.8
Q ss_pred hccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCHHHHHHHHH
Q 035971 560 LKRLKGIGEKRASYILELREESPEPFKNLDDLKDIGLSAKQIKGMMK 606 (614)
Q Consensus 560 L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~~~~~~~~~ 606 (614)
|..|||||+++++++ + .. | +.++.||.++ +.+.+.+.|-
T Consensus 180 l~~l~GiG~~~~~~L---~-~~-G-i~t~gdl~~~--~~~~L~~~fG 218 (240)
T d1jx4a2 180 IADVPGIGNITAEKL---K-KL-G-INKLVDTLSI--EFDKLKGMIG 218 (240)
T ss_dssp GGGSTTCCHHHHHHH---H-TT-T-CCBGGGGGSS--CHHHHHHHHC
T ss_pred hhhcCCCCHHHHHHH---H-Hh-C-CCcHHHHHcC--CHHHHHHHHC
Confidence 457899999999886 2 34 5 8999999874 5666666653
No 191
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=30.66 E-value=13 Score=32.28 Aligned_cols=41 Identities=17% Similarity=0.290 Sum_probs=23.9
Q ss_pred CCChHHHHhhhhHHHHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 73 NEGNGIIFAREVKPLISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 73 ~asQ~eVf~~~v~plV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
+..+-.-+...+.+.+...-..-...|+-+|.=|+|||+-.
T Consensus 10 ~e~~t~~lg~~la~~l~~~~~~~g~ii~L~G~LGaGKTtfv 50 (158)
T d1htwa_ 10 DEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLT 50 (158)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCSSCEEEEEECSTTSSHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhccCCCCeEEEEecCCCccHHHHH
Confidence 33333334444444443333334456888999999999654
No 192
>d1z3eb1 a.60.3.1 (B:245-311) C-terminal domain of RNA polymerase alpha subunit {Bacillus subtilis [TaxId: 1423]}
Probab=29.98 E-value=24 Score=26.11 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=26.7
Q ss_pred hccCCHHhhccCCCCCHHHHHHHHHHHHhCC
Q 035971 552 LNTGGKEDLKRLKGIGEKRASYILELREESP 582 (614)
Q Consensus 552 lN~A~~~~L~~l~gig~~~A~~Ii~~R~~~g 582 (614)
|-.-+.+||..+|++|.+-.+.|.+.=..+|
T Consensus 33 L~~~s~~dLl~~~nfG~kSl~EIk~~L~~~g 63 (67)
T d1z3eb1 33 LANKTEEDMMKVRNLGRKSLEEVKAKLEELG 63 (67)
T ss_dssp HHTSCHHHHHTSTTCCHHHHHHHHHHHHHTT
T ss_pred HHHCCHHHHHhCCCCchhhHHHHHHHHHHcC
Confidence 4467999999999999999999988777664
No 193
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=29.95 E-value=13 Score=31.32 Aligned_cols=17 Identities=29% Similarity=0.300 Sum_probs=13.4
Q ss_pred ceEEEeeccCCCCcceE
Q 035971 96 NATIVACGAKGSGKTRV 112 (614)
Q Consensus 96 N~tI~aYGqTGSGKTyT 112 (614)
-..|--.|++|||||+.
T Consensus 22 ~~iIgI~G~~GSGKSTl 38 (198)
T d1rz3a_ 22 RLVLGIDGLSRSGKTTL 38 (198)
T ss_dssp SEEEEEEECTTSSHHHH
T ss_pred CEEEEEECCCCCCHHHH
Confidence 44566889999999954
No 194
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=29.94 E-value=6.4 Score=38.80 Aligned_cols=18 Identities=39% Similarity=0.586 Sum_probs=14.8
Q ss_pred CceEEEeeccCCCCcceE
Q 035971 95 INATIVACGAKGSGKTRV 112 (614)
Q Consensus 95 ~N~tI~aYGqTGSGKTyT 112 (614)
--+.|+..|+||.|||..
T Consensus 67 p~~niLfiGPTGvGKTEl 84 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLM 84 (364)
T ss_dssp CCCCEEEECCTTSSHHHH
T ss_pred CCcceeeeCCCCccHHHH
Confidence 446689999999999954
No 195
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=29.89 E-value=6.1 Score=33.71 Aligned_cols=14 Identities=43% Similarity=0.700 Sum_probs=0.0
Q ss_pred EEEeeccCCCCcce
Q 035971 98 TIVACGAKGSGKTR 111 (614)
Q Consensus 98 tI~aYGqTGSGKTy 111 (614)
+|+..|..|||||+
T Consensus 4 ~Iil~G~~GsGKST 17 (170)
T d1e6ca_ 4 PIFMVGARGCGMTT 17 (170)
T ss_dssp CEEEESCTTSSHHH
T ss_pred CEEEECCCCCCHHH
No 196
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=29.72 E-value=5.4 Score=40.94 Aligned_cols=17 Identities=41% Similarity=0.669 Sum_probs=13.1
Q ss_pred EEeeccCCCCcceEeec
Q 035971 99 IVACGAKGSGKTRVIQG 115 (614)
Q Consensus 99 I~aYGqTGSGKTyTm~G 115 (614)
++.-|..|||||+||.+
T Consensus 27 ~lV~A~AGSGKT~~lv~ 43 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVLTH 43 (623)
T ss_dssp EEEEECTTSCHHHHHHH
T ss_pred EEEEEeCchHHHHHHHH
Confidence 44448899999999843
No 197
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima [TaxId: 2336]}
Probab=29.64 E-value=37 Score=26.23 Aligned_cols=44 Identities=18% Similarity=0.305 Sum_probs=35.5
Q ss_pred HHHHHHHHHHH-hCCCCCCCHHhhhh-cCCCHHHHHHHHHHHhhhh
Q 035971 569 KRASYILELRE-ESPEPFKNLDDLKD-IGLSAKQIKGMMKKEMECL 612 (614)
Q Consensus 569 ~~A~~Ii~~R~-~~gg~f~~~~dL~~-~gl~~~~~~~~~~~~~~~~ 612 (614)
..-+.||..|- -.|++-.+++++.+ .|+|.+.|.++-.+++..|
T Consensus 21 ~rE~~Ii~~rfGl~~~~~~tl~eI~~~lgiSrERVRQie~~al~kL 66 (87)
T d1ttya_ 21 PREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVKALRKL 66 (87)
T ss_dssp HHHHHHHHHHHTTTTSSCCCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcCCHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 45568888885 22345689999999 9999999999999988654
No 198
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.61 E-value=7 Score=33.66 Aligned_cols=14 Identities=36% Similarity=0.586 Sum_probs=11.3
Q ss_pred EEeeccCCCCcceE
Q 035971 99 IVACGAKGSGKTRV 112 (614)
Q Consensus 99 I~aYGqTGSGKTyT 112 (614)
|+-.|+.|||||+.
T Consensus 5 Ivl~G~pGSGKtT~ 18 (180)
T d1akya1 5 MVLIGPPGAGKGTQ 18 (180)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 56679999999843
No 199
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=29.39 E-value=8.4 Score=32.54 Aligned_cols=14 Identities=43% Similarity=0.558 Sum_probs=11.1
Q ss_pred EeeccCCCCcceEe
Q 035971 100 VACGAKGSGKTRVI 113 (614)
Q Consensus 100 ~aYGqTGSGKTyTm 113 (614)
--.|..|||||+.+
T Consensus 5 ~I~G~~gSGKTTli 18 (165)
T d1xjca_ 5 QVVGYKHSGKTTLM 18 (165)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEEeCCCCCHHHHH
Confidence 35699999999655
No 200
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=28.82 E-value=7.3 Score=34.18 Aligned_cols=14 Identities=50% Similarity=0.636 Sum_probs=11.2
Q ss_pred EEeeccCCCCcceE
Q 035971 99 IVACGAKGSGKTRV 112 (614)
Q Consensus 99 I~aYGqTGSGKTyT 112 (614)
|+-.|+.|||||+.
T Consensus 9 IiliG~PGSGKtT~ 22 (189)
T d2ak3a1 9 AAIMGAPGSGKGTV 22 (189)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 56679999999843
No 201
>d3bzka1 a.60.2.6 (A:474-563) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.63 E-value=10 Score=29.69 Aligned_cols=22 Identities=23% Similarity=0.398 Sum_probs=18.9
Q ss_pred CCHHhhccCCCCCHHHHHHHHH
Q 035971 555 GGKEDLKRLKGIGEKRASYILE 576 (614)
Q Consensus 555 A~~~~L~~l~gig~~~A~~Ii~ 576 (614)
-+.+||..++|||++.-+.|-.
T Consensus 62 ~s~edL~~v~gi~~k~~e~i~~ 83 (90)
T d3bzka1 62 RTRDELKKVSRLGEKTFEQAAG 83 (90)
T ss_dssp SSSGGGGGSTTCCHHHHHHHHT
T ss_pred CCHHHHhhCCCCCHHHHHHhcC
Confidence 4779999999999999988743
No 202
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=28.56 E-value=7.4 Score=33.61 Aligned_cols=12 Identities=33% Similarity=0.509 Sum_probs=9.7
Q ss_pred eeccCCCCcceE
Q 035971 101 ACGAKGSGKTRV 112 (614)
Q Consensus 101 aYGqTGSGKTyT 112 (614)
-.|++|||||+.
T Consensus 8 l~G~pGSGKsT~ 19 (190)
T d1ak2a1 8 LLGPPGAGKGTQ 19 (190)
T ss_dssp EECCTTSSHHHH
T ss_pred EECCCCCCHHHH
Confidence 369999999843
No 203
>d1k82a1 a.156.1.2 (A:129-216) DNA repair protein MutM (Fpg) {Escherichia coli [TaxId: 562]}
Probab=28.25 E-value=12 Score=29.19 Aligned_cols=29 Identities=24% Similarity=0.126 Sum_probs=24.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh
Q 035971 563 LKGIGEKRASYILELREESPEPFKNLDDLKD 593 (614)
Q Consensus 563 l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~ 593 (614)
+.|||-.+|..|+=.-.-+ |++-..+|.+
T Consensus 35 iaGiGN~y~~EiLf~a~I~--P~~~~~~L~~ 63 (88)
T d1k82a1 35 VVGVGNIYASESLFAAGIH--PDRLASSLSL 63 (88)
T ss_dssp CSSCCHHHHHHHHHHHTCC--TTSBGGGCCH
T ss_pred ccccchHHHHHHHHHHCCC--ccChHHHCCH
Confidence 7899999999999777777 9998888743
No 204
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.77 E-value=7.8 Score=33.72 Aligned_cols=13 Identities=46% Similarity=0.843 Sum_probs=11.5
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+-.|++|||||.
T Consensus 4 Ivl~GpsG~GK~t 16 (186)
T d1gkya_ 4 IVISGPSGTGKST 16 (186)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6789999999985
No 205
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=27.31 E-value=54 Score=22.17 Aligned_cols=40 Identities=28% Similarity=0.451 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCC-CCCCCHHhhhh-cCCCHHHHHHHHHHHhh
Q 035971 570 RASYILELREESP-EPFKNLDDLKD-IGLSAKQIKGMMKKEME 610 (614)
Q Consensus 570 ~A~~Ii~~R~~~g-g~f~~~~dL~~-~gl~~~~~~~~~~~~~~ 610 (614)
..++|++|=+++- .|+ +++||.+ .|+|...+.+++++..+
T Consensus 4 ~i~~v~~yI~~~~~~~~-tl~~lA~~~~~s~~~l~r~Fk~~~g 45 (54)
T d1bl0a1 4 TIHSILDWIEDNLESPL-SLEKVSERSGYSKWHLQRMFKKETG 45 (54)
T ss_dssp HHHHHHHHHHTTTTSCC-CCHHHHHHSSSCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCCCC-CHHHHHHHHCcCHHHHHHHHHHHHC
Confidence 4567777776652 233 8999999 99999999999998764
No 206
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=27.30 E-value=7.3 Score=36.76 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=24.6
Q ss_pred hhHHHHHHHhc-C---CceEEEeeccCCCCcceEe
Q 035971 83 EVKPLISEVFN-G---INATIVACGAKGSGKTRVI 113 (614)
Q Consensus 83 ~v~plV~~vl~-G---~N~tI~aYGqTGSGKTyTm 113 (614)
+..+.++.++. | .+...-.||+.|||||+.+
T Consensus 40 TGs~~lD~~Lg~GGip~g~itei~G~~~sGKT~l~ 74 (268)
T d1xp8a1 40 TGSLSLDLALGVGGIPRGRITEIYGPESGGKTTLA 74 (268)
T ss_dssp CSCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHH
T ss_pred CCCHHHHHHhcCCCccCceEEEEecCCccchHHHH
Confidence 46678888886 5 4557889999999999754
No 207
>d2o38a1 a.35.1.13 (A:28-116) Hypothetical protein RPA3824 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=27.26 E-value=26 Score=26.79 Aligned_cols=37 Identities=5% Similarity=0.126 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHHH
Q 035971 569 KRASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKKE 608 (614)
Q Consensus 569 ~~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~~ 608 (614)
.++.+|.+.|+..|= +..||.+ .|++...|.+|.++.
T Consensus 11 ~l~~~i~~~r~~~gl---tq~~lA~~~gis~~~is~ie~G~ 48 (89)
T d2o38a1 11 RLAYALNAVIDRARL---SQAAAAARLGINQPKVSALRNYK 48 (89)
T ss_dssp HHHHHHHHHHHHTTC---CHHHHHHHHTCCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC---CHHHHHHHHHhhHhHHHHHHcCC
Confidence 468899999999943 8999999 999999999998753
No 208
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=27.03 E-value=9 Score=35.27 Aligned_cols=15 Identities=27% Similarity=0.286 Sum_probs=11.7
Q ss_pred EEeeccCCCCcceEe
Q 035971 99 IVACGAKGSGKTRVI 113 (614)
Q Consensus 99 I~aYGqTGSGKTyTm 113 (614)
++.-++||||||+.+
T Consensus 12 ~lv~~~TGsGKT~~~ 26 (305)
T d2bmfa2 12 TIMDLHPGAGKTKRY 26 (305)
T ss_dssp EEECCCTTSSTTTTH
T ss_pred EEEEECCCCCHHHHH
Confidence 455699999999653
No 209
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=26.23 E-value=60 Score=23.15 Aligned_cols=45 Identities=18% Similarity=0.396 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhC-CCCCCCHHhhhh-cCCCHHHHHHHHHHHhhhh
Q 035971 568 EKRASYILELREES-PEPFKNLDDLKD-IGLSAKQIKGMMKKEMECL 612 (614)
Q Consensus 568 ~~~A~~Ii~~R~~~-gg~f~~~~dL~~-~gl~~~~~~~~~~~~~~~~ 612 (614)
+..-+.||..|--. |+.=.++.++.+ .|+|.+.|.++-.+++..|
T Consensus 10 ~~rer~Ii~~ryGl~~~~~~tl~eIa~~lgiS~erVrqi~~~al~kL 56 (61)
T d1ku3a_ 10 SEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKL 56 (61)
T ss_dssp CHHHHHHHHHHHTTTTSSCCCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 45678899999522 233368999999 9999999999999988765
No 210
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=26.15 E-value=8.9 Score=32.48 Aligned_cols=13 Identities=54% Similarity=0.687 Sum_probs=0.0
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+-.|..|||||.
T Consensus 3 I~liG~~GsGKsT 15 (161)
T d1viaa_ 3 IVFIGFMGSGKST 15 (161)
T ss_dssp EEEECCTTSCHHH
T ss_pred EEEECCCCCCHHH
No 211
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.54 E-value=9.1 Score=33.49 Aligned_cols=13 Identities=38% Similarity=0.800 Sum_probs=11.4
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+-.|++|||||.
T Consensus 3 Ivl~GPsGsGK~t 15 (190)
T d1lvga_ 3 VVLSGPSGAGKST 15 (190)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6788999999985
No 212
>d1k3xa1 a.156.1.2 (A:125-213) Endonuclease VIII {Escherichia coli [TaxId: 562]}
Probab=25.32 E-value=49 Score=25.31 Aligned_cols=39 Identities=23% Similarity=0.203 Sum_probs=30.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCCHHhhhhcCCCHHHHHHHHHHH
Q 035971 563 LKGIGEKRASYILELREESPEPFKNLDDLKDIGLSAKQIKGMMKKE 608 (614)
Q Consensus 563 l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~~gl~~~~~~~~~~~~ 608 (614)
+.|||-.+|..|+=.-.-+ |++-+.+| +.++++++...+
T Consensus 39 ~aGIGN~~~~EiL~~a~i~--P~~~~~~L-----~~~~~~~L~~~~ 77 (89)
T d1k3xa1 39 LAGLGNYLRVEILWQVGLT--GNHKAKDL-----NAAQLDALAHAL 77 (89)
T ss_dssp SBTCCHHHHHHHHHHHTCC--SSCCGGGS-----CHHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHHhccc--ccCchhhC-----CHHHHHHHHHHH
Confidence 7899999999999777777 99988887 445555555443
No 213
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=24.98 E-value=28 Score=24.93 Aligned_cols=34 Identities=18% Similarity=0.440 Sum_probs=27.6
Q ss_pred HHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 571 ASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 571 A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
.++|=++|++. | + +.+||.+ .|++...+.+|-+.
T Consensus 3 g~~ik~~R~~~-g-l-tq~~la~~~gis~~~i~~~E~g 37 (68)
T d1b0na2 3 GQRIKQYRKEK-G-Y-SLSELAEKAGVAKSYLSSIERN 37 (68)
T ss_dssp HHHHHHHHHHT-T-C-CHHHHHHHHTCCHHHHHHHHTT
T ss_pred HHHHHHHHHHc-C-C-CHHHHHHHHCCCHHHHHHHHcC
Confidence 56778889888 4 4 7899999 99999999888763
No 214
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=24.90 E-value=9.5 Score=34.13 Aligned_cols=15 Identities=20% Similarity=0.507 Sum_probs=11.9
Q ss_pred EEEeeccCCCCcceE
Q 035971 98 TIVACGAKGSGKTRV 112 (614)
Q Consensus 98 tI~aYGqTGSGKTyT 112 (614)
-|+..||+|+||+..
T Consensus 4 livi~GPSG~GK~tl 18 (205)
T d1s96a_ 4 LYIVSAPSGAGKSSL 18 (205)
T ss_dssp EEEEECCTTSCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 366789999999843
No 215
>d1lb2b_ a.60.3.1 (B:) C-terminal domain of RNA polymerase alpha subunit {Escherichia coli [TaxId: 562]}
Probab=24.38 E-value=31 Score=25.77 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=26.2
Q ss_pred cCCHHhhccCCCCCHHHHHHHHHHHHhCC
Q 035971 554 TGGKEDLKRLKGIGEKRASYILELREESP 582 (614)
Q Consensus 554 ~A~~~~L~~l~gig~~~A~~Ii~~R~~~g 582 (614)
.-+.+||..+|++|.+..+.|.++=.++|
T Consensus 34 ~~s~~dLl~~~n~G~KSl~EI~~~L~~~g 62 (72)
T d1lb2b_ 34 QRTEVELLKTPNLGKKSLTEIKDVLASRG 62 (72)
T ss_dssp TCCHHHHHHSTTCCHHHHHHHHHHHHHTT
T ss_pred hCCHHHHHhCCCCcHhHHHHHHHHHHHcC
Confidence 56999999999999999999999888774
No 216
>d3ci0k2 a.60.16.1 (K:94-203) Pseudopilin GspK {Escherichia coli [TaxId: 562]}
Probab=23.94 E-value=53 Score=26.04 Aligned_cols=47 Identities=15% Similarity=0.261 Sum_probs=33.6
Q ss_pred hhccCCCCCH----HHHHHHHHHHHhC------------------------CCCCCCHHhhhh-cCCCHHHHHHHH
Q 035971 559 DLKRLKGIGE----KRASYILELREES------------------------PEPFKNLDDLKD-IGLSAKQIKGMM 605 (614)
Q Consensus 559 ~L~~l~gig~----~~A~~Ii~~R~~~------------------------gg~f~~~~dL~~-~gl~~~~~~~~~ 605 (614)
.|...-||.+ .+|++|++++..- ++||.++++|.. .|++++.++++.
T Consensus 25 ~Ll~~lgi~~~~a~~la~~l~DWiD~D~~~~~~~GAEd~~Y~~~~~py~~~n~~l~s~sEL~~v~G~~~~~~~~L~ 100 (110)
T d3ci0k2 25 ALISRLDVPAYRAELIAESLWEFIDEDRSVQTRLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLK 100 (110)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHHHSSSSSCCSSSCCCHHHHHTSSSCBCCCCSCCSSGGGGGGSTTCCHHHHHHHT
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhCccccccccCCccccchhhcCCCCCCCCCCcCCHHHHhhccCCCHHHHHHHh
Confidence 3444457765 4677777777311 247999999999 799999888764
No 217
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=23.86 E-value=13 Score=35.89 Aligned_cols=15 Identities=33% Similarity=0.552 Sum_probs=12.5
Q ss_pred eEEEeeccCCCCcce
Q 035971 97 ATIVACGAKGSGKTR 111 (614)
Q Consensus 97 ~tI~aYGqTGSGKTy 111 (614)
+.++.||+.|+|||.
T Consensus 124 g~~l~~G~pG~GKT~ 138 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTP 138 (321)
T ss_dssp EEEEEECSSSSCHHH
T ss_pred ceEEEECCCCccHHH
Confidence 457779999999994
No 218
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=23.18 E-value=12 Score=32.60 Aligned_cols=15 Identities=33% Similarity=0.556 Sum_probs=11.4
Q ss_pred EEEeeccCCCCcceE
Q 035971 98 TIVACGAKGSGKTRV 112 (614)
Q Consensus 98 tI~aYGqTGSGKTyT 112 (614)
.|.-.|+.||||++.
T Consensus 5 iI~I~GppGSGKgT~ 19 (225)
T d1ckea_ 5 VITIDGPSGAGKGTL 19 (225)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 355569999999843
No 219
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=23.04 E-value=17 Score=36.20 Aligned_cols=47 Identities=26% Similarity=0.396 Sum_probs=32.9
Q ss_pred eEeeeeecCCCChHHHHhhhhHHHHHHHhcCCceEEEeeccCCCCcceEeec
Q 035971 64 YKLDYCYEQNEGNGIIFAREVKPLISEVFNGINATIVACGAKGSGKTRVIQG 115 (614)
Q Consensus 64 F~FD~VF~~~asQ~eVf~~~v~plV~~vl~G~N~tI~aYGqTGSGKTyTm~G 115 (614)
|..-.=|.|.-+|-+- ++.+++.+-+|..-. ...|.|||||||+|.+
T Consensus 4 f~~~~~~~p~gDQP~a----I~~l~~~l~~g~~~q-~l~GltGS~ka~~iA~ 50 (413)
T d1t5la1 4 FQLVAPYEPQGDQPQA----IAKLVDGLRRGVKHQ-TLLGATGTGKTFTISN 50 (413)
T ss_dssp CCCCCSSCCCTTHHHH----HHHHHHHHHHTCSEE-EEEECTTSCHHHHHHH
T ss_pred eEEecCCCCCCCCHHH----HHHHHHHHhcCCCcE-EEeCCCCcHHHHHHHH
Confidence 5555567777777554 456777777776543 3559999999999954
No 220
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.51 E-value=16 Score=32.22 Aligned_cols=29 Identities=24% Similarity=0.273 Sum_probs=21.5
Q ss_pred hHHHHHHHhcC---CceEEEeeccCCCCcceE
Q 035971 84 VKPLISEVFNG---INATIVACGAKGSGKTRV 112 (614)
Q Consensus 84 v~plV~~vl~G---~N~tI~aYGqTGSGKTyT 112 (614)
.-+-+|.++.| ....++.+|++|+|||..
T Consensus 22 Gi~~LD~~lgGGip~G~~~~i~G~~GsGKT~l 53 (258)
T d1v5wa_ 22 GSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 53 (258)
T ss_dssp SCHHHHHHTTSSBCSSEEEEEECCTTCTHHHH
T ss_pred CCHHHHHhhcCCCcCCEEEEEECCCCCCHHHH
Confidence 44567777764 245789999999999943
No 221
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=22.45 E-value=12 Score=30.95 Aligned_cols=14 Identities=29% Similarity=0.480 Sum_probs=10.7
Q ss_pred EEeeccCCCCcceE
Q 035971 99 IVACGAKGSGKTRV 112 (614)
Q Consensus 99 I~aYGqTGSGKTyT 112 (614)
|.-.|..|||||+.
T Consensus 5 i~itG~~GSGKTTL 18 (170)
T d1np6a_ 5 LAFAAWSGTGKTTL 18 (170)
T ss_dssp EEEECCTTSCHHHH
T ss_pred EEEEcCCCCCHHHH
Confidence 34459999999954
No 222
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=22.43 E-value=64 Score=23.55 Aligned_cols=44 Identities=16% Similarity=0.278 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhCC-CCCCCHHhhhh-cCCCHHHHHHHHHHHhhhh
Q 035971 569 KRASYILELREESP-EPFKNLDDLKD-IGLSAKQIKGMMKKEMECL 612 (614)
Q Consensus 569 ~~A~~Ii~~R~~~g-g~f~~~~dL~~-~gl~~~~~~~~~~~~~~~~ 612 (614)
..-+.||..|-=.+ +.=.+++++.+ .|+|.+.|.++-.+++..|
T Consensus 8 ~rE~~Ii~~rfGl~~~~~~tl~eI~~~lgiSrerVrqie~~al~kL 53 (68)
T d2p7vb1 8 AREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKL 53 (68)
T ss_dssp HHHHHHHHHHTTTTSSSCCCHHHHHHHHTCCHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHcCCCCCCcCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 45678999994221 23369999999 9999999999999988765
No 223
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.98 E-value=2.5e+02 Score=24.81 Aligned_cols=15 Identities=33% Similarity=0.702 Sum_probs=12.5
Q ss_pred EEeeccCCCCcceEe
Q 035971 99 IVACGAKGSGKTRVI 113 (614)
Q Consensus 99 I~aYGqTGSGKTyTm 113 (614)
|...|..+||||..+
T Consensus 29 ivvvG~~SsGKSsli 43 (299)
T d2akab1 29 IAVVGGQSAGKSSVL 43 (299)
T ss_dssp EEEEEBTTSCHHHHH
T ss_pred EEEEcCCCCCHHHHH
Confidence 678899999999654
No 224
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=21.97 E-value=9.6 Score=27.61 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=26.5
Q ss_pred HHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHH
Q 035971 571 ASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKK 607 (614)
Q Consensus 571 A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~ 607 (614)
|++|-++|+.. | + +..||.+ +|++...+.+|.++
T Consensus 3 ~~ri~~lR~~~-g-~-tq~elA~~~gis~~~is~~e~g 37 (66)
T d1utxa_ 3 INNLKLIREKK-K-I-SQSELAALLEVSRQTINGIEKN 37 (66)
T ss_dssp EECHHHHHHHT-T-C-CHHHHHHHHTSCHHHHHHHHTT
T ss_pred HHHHHHHHHHc-C-C-CHHHHHHhcccCHHHHHHHHcC
Confidence 34677888888 4 4 7888888 99999888888654
No 225
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=21.79 E-value=12 Score=31.43 Aligned_cols=15 Identities=33% Similarity=0.585 Sum_probs=11.7
Q ss_pred EEeeccCCCCcceEe
Q 035971 99 IVACGAKGSGKTRVI 113 (614)
Q Consensus 99 I~aYGqTGSGKTyTm 113 (614)
|+-.|..|||||+..
T Consensus 4 ivi~G~~GsGKTT~~ 18 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVL 18 (194)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 455799999999554
No 226
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.67 E-value=12 Score=31.49 Aligned_cols=13 Identities=46% Similarity=0.670 Sum_probs=0.0
Q ss_pred EEeeccCCCCcce
Q 035971 99 IVACGAKGSGKTR 111 (614)
Q Consensus 99 I~aYGqTGSGKTy 111 (614)
|+..|..|+|||+
T Consensus 4 IvliG~~G~GKST 16 (165)
T d2iyva1 4 AVLVGLPGSGKST 16 (165)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
No 227
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=21.63 E-value=9.1 Score=32.43 Aligned_cols=17 Identities=41% Similarity=0.640 Sum_probs=14.2
Q ss_pred eEEEeeccCCCCcceEe
Q 035971 97 ATIVACGAKGSGKTRVI 113 (614)
Q Consensus 97 ~tI~aYGqTGSGKTyTm 113 (614)
++|.-.|.+|+|||..+
T Consensus 1 a~I~lvG~~nvGKSsLi 17 (184)
T d2cxxa1 1 ATIIFAGRSNVGKSTLI 17 (184)
T ss_dssp CEEEEEEBTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 57899999999998543
No 228
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=21.35 E-value=10 Score=34.98 Aligned_cols=16 Identities=31% Similarity=0.615 Sum_probs=12.4
Q ss_pred EEEeeccCCCCcceEe
Q 035971 98 TIVACGAKGSGKTRVI 113 (614)
Q Consensus 98 tI~aYGqTGSGKTyTm 113 (614)
.+--.|++|||||+.|
T Consensus 33 ~~~iiG~sGsGKSTLl 48 (230)
T d1l2ta_ 33 FVSIMGPSGSGKSTML 48 (230)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCcchhh
Confidence 3556799999999554
No 229
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=21.33 E-value=9.8 Score=32.41 Aligned_cols=19 Identities=16% Similarity=0.380 Sum_probs=15.5
Q ss_pred CceEEEeeccCCCCcceEe
Q 035971 95 INATIVACGAKGSGKTRVI 113 (614)
Q Consensus 95 ~N~tI~aYGqTGSGKTyTm 113 (614)
|.+.|...|.+|+|||..+
T Consensus 4 ~~~~I~lvG~~~~GKSSLi 22 (178)
T d1wf3a1 4 YSGFVAIVGKPNVGKSTLL 22 (178)
T ss_dssp EEEEEEEECSTTSSHHHHH
T ss_pred cCcEEEEECCCCCCHHHHH
Confidence 5568999999999998543
No 230
>d2auwa1 a.35.1.10 (A:88-154) Hypothetical protein NE0471 C-terminal domain {Nitrosomonas europaea [TaxId: 915]}
Probab=21.23 E-value=47 Score=24.35 Aligned_cols=33 Identities=9% Similarity=0.200 Sum_probs=27.7
Q ss_pred HHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHH
Q 035971 571 ASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMK 606 (614)
Q Consensus 571 A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~ 606 (614)
.+.|-++|+.. | + +-.+|.+ +|++...+.+|=+
T Consensus 3 ~e~~k~~R~~~-g-l-tQ~elA~~LGvs~~ti~~yE~ 36 (67)
T d2auwa1 3 HEMFGDWMHRN-N-L-SLTTAAEALGISRRMVSYYRT 36 (67)
T ss_dssp HHHHHHHHHHT-T-C-CHHHHHHHHTSCHHHHHHHHT
T ss_pred HHHHHHHHHHc-C-C-CHHHHHHHhCCCHHHHHHHHc
Confidence 36788999999 4 4 8899999 9999999998843
No 231
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=20.43 E-value=26 Score=32.66 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=30.6
Q ss_pred EeeeeecCCCChHHHHhhhhHHHHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 65 KLDYCYEQNEGNGIIFAREVKPLISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 65 ~FD~VF~~~asQ~eVf~~~v~plV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+|.+++-+ ..+..++.-+.......++-.|+.|.|||..+
T Consensus 16 ~ld~~igRd--------~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv 56 (268)
T d1r6bx2 16 GIDPLIGRE--------KELERAIQVLCRRRKNNPLLVGESGVGKTAIA 56 (268)
T ss_dssp CSCCCCSCH--------HHHHHHHHHHTSSSSCEEEEECCTTSSHHHHH
T ss_pred CCCcccChH--------HHHHHHHHHHhcCccCCcEEECCCCCcHHHHH
Confidence 356666543 35677777777788888899999999999554
No 232
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=20.43 E-value=9.3 Score=35.95 Aligned_cols=25 Identities=8% Similarity=0.058 Sum_probs=15.8
Q ss_pred HHHHHhcCCceEEEeeccCCCCcceEe
Q 035971 87 LISEVFNGINATIVACGAKGSGKTRVI 113 (614)
Q Consensus 87 lV~~vl~G~N~tI~aYGqTGSGKTyTm 113 (614)
.+..++...++.+. -+||+|||.++
T Consensus 121 av~~~l~~~~~il~--~pTGsGKT~i~ 145 (282)
T d1rifa_ 121 AVFEGLVNRRRILN--LPTSAGRSLIQ 145 (282)
T ss_dssp HHHHHHHHSEEEEC--CCTTSCHHHHH
T ss_pred HHHHHHhcCCceeE--EEcccCccHHH
Confidence 44455555555443 38999999664
No 233
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=20.30 E-value=69 Score=22.58 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhCCCCCCCHHhhhh-cCCCHHHHHHHHHHHhhhh
Q 035971 570 RASYILELREESPEPFKNLDDLKD-IGLSAKQIKGMMKKEMECL 612 (614)
Q Consensus 570 ~A~~Ii~~R~~~gg~f~~~~dL~~-~gl~~~~~~~~~~~~~~~~ 612 (614)
.-+.|+.+|--. | .+.+++.+ .|++...++..+.++...|
T Consensus 25 ~~r~v~~l~~~~-~--~s~~eIA~~lgis~~tv~~~~~ra~~~L 65 (71)
T d1rp3a2 25 REKLVIQLIFYE-E--LPAKEVAKILETSVSRVSQLKAKALERL 65 (71)
T ss_dssp HHHHHHHHHHTS-C--CCHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhH-h--CCHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 367777777655 4 39999999 9999999999998887654
No 234
>d1ci4a_ a.60.5.1 (A:) Barrier-to-autointegration factor, BAF {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.04 E-value=23 Score=27.67 Aligned_cols=46 Identities=17% Similarity=0.221 Sum_probs=31.5
Q ss_pred HhhccCCCCCHHHHHHHHHHHHhCCCCCCCHHhhhh----cCCCHHHHHHHHHHHh
Q 035971 558 EDLKRLKGIGEKRASYILELREESPEPFKNLDDLKD----IGLSAKQIKGMMKKEM 609 (614)
Q Consensus 558 ~~L~~l~gig~~~A~~Ii~~R~~~gg~f~~~~dL~~----~gl~~~~~~~~~~~~~ 609 (614)
.....|||||+.++++..+ . | |.-.-.+.- .+-+.+....||+.+.
T Consensus 18 K~V~~l~GIG~~lg~~L~~----k-G-fdKAy~vLGqfL~l~kde~~F~~Wlk~~~ 67 (89)
T d1ci4a_ 18 KPVGSLAGIGEVLGKKLEE----R-G-FDKAYVVLGQFLVLKKDEDLFREWLKDTC 67 (89)
T ss_dssp CCGGGSTTCCHHHHHHHHH----T-T-CCSHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CcccccCCccHHHHHHHHH----c-C-ccHHHHHHHHHHHhCCcHHHHHHHHHHHc
Confidence 4456799999999998753 2 4 655444332 6677788888887654
Done!