Your job contains 1 sequence.
>035975
ACSGSFVNIAIKKTNEVKPSQPKIEEINFDDFGVDLCPALNGNLSCSDVDDVDKNICVGS
ERENIDTTRTSEPHNTGCQKLEASNVNEAIRRGAVHSRIEEDLLQTESKSDVPQFMKLEL
VIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFS
SKCRLEDLLPNVSLRQAIEHFLESQILISGSENAYHRYAPDGESGIQAKDVSCAVTNLQR
EPELADSPSATGRGSNQIVADCDSVIRNNTGSCVNHLGADNSLKSCTLPYKVKQIDAEVH
GSAQPVDFKRRPVDLDEFAECHGESQPIHVEAEFSNKRKRGLWVDTSGADKSFIESGRNR
KDRTCYMCGSPNHLIRDCPAALSPNPMLQQGALRGHAPPFWNGPSLAHVRPIANIYGNHG
MMPFNATMAPTTQFAVPAYMPSMFGGIPAYGFDMEASCSGYTMMGGPRTPVGVNAGRLGR
SRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRP
CYQLSEVEDMPSSSSWHGDERHKKHSRQSKKHNEREQFHSDSSWSRHAVKEKDGERKKLK
SDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEKDLSHGSRHSRHKSKSMDDEPSHDRWLM
VKGSDEDHGEDYRYSERKSGYIKYS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035975
(685 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1C4G3 - symbol:E1C4G3 "Uncharacterized protein... 170 1.1e-11 2
ZFIN|ZDB-GENE-040930-5 - symbol:rbbp6 "retinoblastoma bin... 164 2.0e-11 2
UNIPROTKB|J9P0A5 - symbol:RBBP6 "Uncharacterized protein"... 168 2.6e-11 2
UNIPROTKB|Q7Z6E9 - symbol:RBBP6 "E3 ubiquitin-protein lig... 169 5.7e-11 3
MGI|MGI:894835 - symbol:Rbbp6 "retinoblastoma binding pro... 169 6.6e-11 2
UNIPROTKB|F1M6Y5 - symbol:Rbbp6 "Protein Rbbp6" species:1... 169 2.1e-10 2
UNIPROTKB|G3V953 - symbol:Rbbp6 "Retinoblastoma binding p... 169 2.2e-10 2
UNIPROTKB|F1RFD8 - symbol:RBBP6 "Uncharacterized protein"... 168 2.2e-09 2
TAIR|locus:2171569 - symbol:AT5G47430 species:3702 "Arabi... 167 3.4e-09 3
FB|FBgn0086129 - symbol:snama "something that sticks like... 176 6.1e-09 3
UNIPROTKB|E2RP24 - symbol:RBBP6 "Uncharacterized protein"... 168 1.4e-08 2
UNIPROTKB|H3BSK8 - symbol:RBBP6 "E3 ubiquitin-protein lig... 169 4.3e-08 2
WB|WBGene00009477 - symbol:tag-214 species:6239 "Caenorha... 136 4.7e-08 3
UNIPROTKB|E1BCZ2 - symbol:RBBP6 "Uncharacterized protein"... 169 4.1e-07 3
UNIPROTKB|H3BUN0 - symbol:RBBP6 "E3 ubiquitin-protein lig... 140 1.7e-06 1
ZFIN|ZDB-GENE-040704-3 - symbol:rbck1 "RanBP-type and C3H... 144 1.8e-06 1
UNIPROTKB|I3LUY7 - symbol:I3LUY7 "Uncharacterized protein... 120 2.1e-06 1
ASPGD|ASPL0000005981 - symbol:AN6342 species:162425 "Emer... 135 2.4e-06 2
UNIPROTKB|K7GS78 - symbol:LONRF3 "Uncharacterized protein... 139 9.8e-06 1
UNIPROTKB|K7GKX2 - symbol:LONRF3 "Uncharacterized protein... 139 1.0e-05 1
UNIPROTKB|K7GLC4 - symbol:LONRF3 "Uncharacterized protein... 139 1.1e-05 1
UNIPROTKB|F1RU80 - symbol:LONRF3 "Uncharacterized protein... 139 1.2e-05 1
POMBASE|SPBP8B7.15c - symbol:SPBP8B7.15c "ubiquitin-prote... 135 1.6e-05 1
UNIPROTKB|C9J0Q4 - symbol:RAD18 "E3 ubiquitin-protein lig... 111 1.9e-05 1
UNIPROTKB|F8WFA6 - symbol:RAD18 "E3 ubiquitin-protein lig... 111 1.9e-05 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 111 1.9e-05 1
ZFIN|ZDB-GENE-040426-849 - symbol:rnf8 "ring finger prote... 134 2.3e-05 1
UNIPROTKB|E1BID7 - symbol:TRIM69 "Uncharacterized protein... 133 2.7e-05 1
UNIPROTKB|F1NNQ7 - symbol:Gga.54568 "Uncharacterized prot... 133 3.9e-05 1
ZFIN|ZDB-GENE-081031-50 - symbol:btr19 "bloodthirsty-rela... 119 8.1e-05 1
MGI|MGI:1890476 - symbol:Rad18 "RAD18 homolog (S. cerevis... 127 0.00013 1
MGI|MGI:1921615 - symbol:Lonrf3 "LON peptidase N-terminal... 129 0.00013 1
FB|FBgn0040294 - symbol:POSH "Plenty of SH3s" species:722... 129 0.00015 1
UNIPROTKB|H9KYY7 - symbol:H9KYY7 "Uncharacterized protein... 118 0.00016 1
UNIPROTKB|B3KUN7 - symbol:LONRF3 "LON peptidase N-termina... 124 0.00026 1
UNIPROTKB|H0Y7Q8 - symbol:LONRF3 "LON peptidase N-termina... 124 0.00028 1
ZFIN|ZDB-GENE-070705-376 - symbol:btr24 "bloodthirsty-rel... 124 0.00028 1
UNIPROTKB|G3X6C1 - symbol:LONRF3 "Uncharacterized protein... 126 0.00028 1
UNIPROTKB|E1BTQ2 - symbol:RNF8 "Uncharacterized protein" ... 100 0.00029 1
ZFIN|ZDB-GENE-060421-3419 - symbol:btr20 "bloodthirsty-re... 124 0.00031 1
UNIPROTKB|F1SN25 - symbol:TRIM69 "Uncharacterized protein... 123 0.00034 1
DICTYBASE|DDB_G0288453 - symbol:DDB_G0288453 "E3 ubiquiti... 126 0.00036 2
UNIPROTKB|C9IZE0 - symbol:TRIM59 "Tripartite motif-contai... 99 0.00038 1
UNIPROTKB|C9J9F0 - symbol:TRIM59 "Tripartite motif-contai... 99 0.00038 1
UNIPROTKB|E1BSU9 - symbol:LOC416147 "Uncharacterized prot... 118 0.00039 1
UNIPROTKB|Q2HJ46 - symbol:RNF8 "E3 ubiquitin-protein liga... 122 0.00041 1
UNIPROTKB|Q496Y0 - symbol:LONRF3 "LON peptidase N-termina... 124 0.00046 1
UNIPROTKB|J3KSI2 - symbol:RNF138 "E3 ubiquitin-protein li... 98 0.00048 1
ZFIN|ZDB-GENE-081031-80 - symbol:btr21 "bloodthirsty-rela... 122 0.00051 1
UNIPROTKB|E2RKD8 - symbol:RNF8 "Uncharacterized protein" ... 121 0.00053 1
UNIPROTKB|J9P6M8 - symbol:RNF8 "Uncharacterized protein" ... 121 0.00053 1
UNIPROTKB|E1BSV9 - symbol:LOC416146 "Uncharacterized prot... 118 0.00053 1
UNIPROTKB|F1NVL6 - symbol:RAD18 "Uncharacterized protein"... 121 0.00055 1
UNIPROTKB|F1PSB6 - symbol:LONRF3 "Uncharacterized protein... 123 0.00060 1
UNIPROTKB|C9JNB9 - symbol:TRIM59 "Tripartite motif-contai... 97 0.00061 1
UNIPROTKB|F1RVS2 - symbol:LOC100153408 "Uncharacterized p... 120 0.00068 1
UNIPROTKB|I3L6W2 - symbol:LOC100153408 "Uncharacterized p... 120 0.00069 1
UNIPROTKB|Q58DB5 - symbol:RAD18 "Uncharacterized protein"... 117 0.00078 1
UNIPROTKB|F1NWA3 - symbol:F1NWA3 "Uncharacterized protein... 120 0.00088 1
UNIPROTKB|I3LT33 - symbol:LONRF1 "Uncharacterized protein... 121 0.00091 1
RGD|1306993 - symbol:Rad18 "RAD18 homolog (S. cerevisiae)... 127 0.00098 2
>UNIPROTKB|E1C4G3 [details] [associations]
symbol:E1C4G3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001878 InterPro:IPR014891
Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0042787 GeneTree:ENSGT00610000086096 OMA:RIRIGLK
EMBL:AADN02023635 IPI:IPI00572670 Ensembl:ENSGALT00000009734
Uniprot:E1C4G3
Length = 922
Score = 170 (64.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 232 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 287
Query: 169 LVEKAR--CPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 288 LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNF 322
Score = 76 (31.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 32/136 (23%), Positives = 56/136 (41%)
Query: 499 NMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDM---PSSSS 555
N ++S D E+ + K R DE L +K S+ RE Q S+ D PS
Sbjct: 630 NRDKKSDHDSSREHSSSKRR-DEKSELARRKDSPSRNRESTSG-QKSKPRDERAEPSKKG 687
Query: 556 WHGDEXXXXXXXXXXXXNEREQFH-SDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCS 614
+ ++ + H S S H +K+ ++K K +K + K SC+
Sbjct: 688 AGDSKRSSYSPSRDRKQSDHKTAHDSKRSLEEHKPLDKNSGKEKEKEKIKSNKEKEPSCN 747
Query: 615 E-SGLEPSYSSDRKKK 629
+ S ++ S + +K+
Sbjct: 748 KPSSIQESPDAKNEKE 763
Score = 54 (24.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 24/118 (20%), Positives = 45/118 (38%)
Query: 506 DDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXX 565
+ D + NV+ K + ++K + ++ ++ + V +S S
Sbjct: 805 ESDSESNVSAKDEETVGKNCKEQKEK-AIDKVKQDTAAPATVSQPEASRSQSQSSPSVSR 863
Query: 566 XXXXXXXNEREQFHSDSSWSRHAV----KEKDGERKKLKSDVKRHSHKPDSCSESGLE 619
+ + HS S+ S + K+K E+KK K K HK + +E LE
Sbjct: 864 SRSQSPAESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKHKKHKKHKKHAENEPELE 921
Score = 51 (23.0 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 20/92 (21%), Positives = 33/92 (35%)
Query: 587 HAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYS-SDRKKKQKEKDLXXXXXXXXXX 645
H++ +KD K+ KS V+ + +E G + S S + + EK
Sbjct: 569 HSLSDKDTSEKR-KSGVQPEKDHSERATEQGNGKNISQSSKDSRSSEKHDTGRGSTAKDF 627
Query: 646 XXXMDDEPSHDRWLMVKGSDEDHGEDYRYSER 677
D + HD S +H R E+
Sbjct: 628 TPNRDKKSDHD-------SSREHSSSKRRDEK 652
Score = 49 (22.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 596 RKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEK 633
R + +S + + S + SG S S +KKK+KEK
Sbjct: 863 RSRSQSPAESQTRSHSSSASSG--ESQDSKKKKKKKEK 898
Score = 40 (19.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 221 DGESGIQAKDVSCAVTNLQREPELA 245
D ES + AKD N + + E A
Sbjct: 807 DSESNVSAKDEETVGKNCKEQKEKA 831
Score = 37 (18.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 501 SEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRP 540
S S + +D K + + + H K K E P
Sbjct: 879 SSASSGESQDSKKKKKKKEKKKHKKHKKHKKHKKHAENEP 918
>ZFIN|ZDB-GENE-040930-5 [details] [associations]
symbol:rbbp6 "retinoblastoma binding protein 6"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 ZFIN:ZDB-GENE-040930-5
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:4.10.60.10
GeneTree:ENSGT00610000086096 InterPro:IPR025829 Pfam:PF13696
EMBL:BX255942 Ensembl:ENSDART00000150918 Bgee:I3IS00 Uniprot:I3IS00
Length = 1741
Score = 164 (62.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 125 NASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKAR--CPKCFSSK 182
++S+ E P EL C +C L +AV+IPCC +S+C+ CIR L+E CP C S
Sbjct: 242 SSSSEEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDDCIRTCLLESEEHVCPTCKQSD 301
Query: 183 CRLEDLLPNVSLRQAIEHF 201
+ L+ N LRQA+ +F
Sbjct: 302 VSPDALIANKFLRQAVNNF 320
Score = 86 (35.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 39/161 (24%), Positives = 66/161 (40%)
Query: 490 EKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERR---PCYQLSE 546
+K+ + +I ++ + D E ++ H + RL S ++E + P Y S+
Sbjct: 1561 DKEHRTPHITLTPEPRTDAEKSAPHVDHIKIPSARLTRLSSDLARETDEAAFVPDYSESD 1620
Query: 547 VE--DMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSS-WSRHAVKEK-DGERKKLKSD 602
E D+ S + G E S SS S+ + K+K D + KK K
Sbjct: 1621 SEASDIESKTEQKGRERDSSGSHSPSPSGSHGHSSSPSSPGSQDSKKKKRDKKEKKEKKK 1680
Query: 603 VKRHS----HKPDSCSES-----GLEPSYSSDRKKKQKEKD 634
K+H HK + +ES G + + + KK K+KD
Sbjct: 1681 HKKHKKHKKHKKHTSNESESELKGQKHKHKKKKSKKSKDKD 1721
Score = 64 (27.6 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 40/228 (17%), Positives = 78/228 (34%)
Query: 454 MEASCSGYTMMGGPRTPVGVNAGRLGRSRVLHHQDCEKKQKLSNINMSEQSYDDDEDENV 513
+ + S T + P V +A +L H + K +++ ++ S D++++
Sbjct: 1328 LNRTSSADTSVAAPS--VENSAVKLSDKESPHSDKAQSTLKEADVKPAKDSTSGDKEKDT 1385
Query: 514 NIKHRYDEAERLHDKKSHFSKER--ERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXX 571
+ K R E + D+ S +E +++P E S HG E
Sbjct: 1386 D-KDRERERTKEKDRSSTTDRESTDKKKPSVPNQESAHAQEKGSDHGSERSSSSQSSRDR 1444
Query: 572 XNEREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQK 631
++ + +S R + + + D K H + S+ P +
Sbjct: 1445 QADKAEPNSRKPTGRETTTGPTSRKPEHRDDTKDHL---GTRSKDEKNPIRRIPSSPPSR 1501
Query: 632 EKDLXXXXXXXXXXXXXMDDEPSHDRWLMVKGSDEDH--G-EDYRYSE 676
KDL PS + ++ + E G ED+R S+
Sbjct: 1502 VKDLHKDSGRKNLEAPQESQSPSRTKRAPIQNTSEPKRSGPEDHRESQ 1549
Score = 62 (26.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 43/197 (21%), Positives = 68/197 (34%)
Query: 467 PRTPVGVNAGRLGRSRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLH 526
P P +A GR + + + C +K + N + +++ IK R
Sbjct: 861 PPPPQSHSAQSRGRVAMTYQEKCAEKFGHLHANTTGTGRSLNKEPLKPIKDREQSGNSAT 920
Query: 527 DKKS-----HFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSD 581
D KS H K+RE + S+ D D E
Sbjct: 921 DSKSLKHKKHRKKKREDGDLFSHSDSMDESRKDDRKMDSMLINSSRDDATPVRDEPMDGA 980
Query: 582 S-SWSRHAVKEKDGERKKLKSD-VKRHSHKPDSCSESGLEPSYSSDRKKKQKEKDLXXXX 639
+ + R KEK E+ K KS+ VKR K +S + E S + + ++KE D
Sbjct: 981 AVPYKRTPEKEKK-EKTKSKSEKVKR---KSESSGQKK-EASGKTSKSAREKESDAPREK 1035
Query: 640 XXXXX-XXXXMDDEPSH 655
+ +EP H
Sbjct: 1036 VASTGPAIKRVKEEPPH 1052
Score = 59 (25.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/142 (21%), Positives = 48/142 (33%)
Query: 494 KLSNINMSEQSYDDDEDENVNIKHRYD-EAERLHDKKSHFSKERERRPCYQLSEVEDMPS 552
+L+ ++ S+ + + DE V D EA + K +ER+ S PS
Sbjct: 1595 RLTRLS-SDLARETDEAAFVPDYSESDSEASDIESKTEQKGRERD-------SSGSHSPS 1646
Query: 553 SSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDS 612
S HG ++ +H +K + KK S+ K
Sbjct: 1647 PSGSHGHSSSPSSPGSQDSKKKKRDKKEKKEKKKHKKHKKHKKHKKHTSNESESELKGQK 1706
Query: 613 CSESGLEPSYSSDRKKKQKEKD 634
+ S D+ K KEKD
Sbjct: 1707 HKHKKKKSKKSKDKDKDDKEKD 1728
Score = 59 (25.8 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 28/97 (28%), Positives = 36/97 (37%)
Query: 588 AVKEKDGERK---KLKSDVKRHSHKPDSCSESG-LEPSYSSDRKKKQ-KEKDLXXXXXXX 642
AVK D E K +S +K KP S SG E DR++++ KEKD
Sbjct: 1347 AVKLSDKESPHSDKAQSTLKEADVKPAKDSTSGDKEKDTDKDRERERTKEKDRSSTTDRE 1406
Query: 643 XXXXXXMDDEPSHDRWLMVKGSDEDHGEDYRYSERKS 679
KGSD HG + S + S
Sbjct: 1407 STDKKKPSVPNQESAHAQEKGSD--HGSERSSSSQSS 1441
Score = 48 (22.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 574 EREQFHSDS--SWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSS 624
ER + +S S S+SR + + R + +S + S P S G SY S
Sbjct: 656 ERRRSYSRSPRSYSRSLSRSRSRSRSRSRSRSRSFSRSPYSRRPRGRSRSYRS 708
Score = 44 (20.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 32/160 (20%), Positives = 59/160 (36%)
Query: 479 GRSRVLHHQDCEKKQKLSNINMSEQSYDDD---EDENVNIKHRYDEAERL-HDKKSHFSK 534
G S + H++ +K + E + D EDE V I+ + E+ ++ + SK
Sbjct: 1267 GGSPIRKHEEKIDLKKTVVKTLEEYTNDSSTPAEDEIVMIQVPRSKWEKEDYESEDDDSK 1326
Query: 535 ERERRPCYQLS-EVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKD 593
R S + +S+ D+ E + + S S K+ D
Sbjct: 1327 VLNRTSSADTSVAAPSVENSAVKLSDKESPHSDKAQSTLKEADVKPAKDSTSGDKEKDTD 1386
Query: 594 GERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEK 633
+R++ ++ K S D S +PS + +EK
Sbjct: 1387 KDRERERTKEKDRSSTTDRESTDKKKPSVPNQESAHAQEK 1426
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 218 YAPD-GESGIQAKDVSCAVTNLQREPELADSPSATGRGSN 256
+ PD ES +A D+ RE + + S S + GS+
Sbjct: 1612 FVPDYSESDSEASDIESKTEQKGRERDSSGSHSPSPSGSH 1651
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 11/54 (20%), Positives = 26/54 (48%)
Query: 487 QDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAE-RLHDKKSHFSKERERR 539
QD +KK++ ++ + + + KH +E+E L +K K++ ++
Sbjct: 1663 QDSKKKKRDKKEKKEKKKHKKHKKHKKHKKHTSNESESELKGQKHKHKKKKSKK 1716
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 604 KRHSHKPDSCSESGLEPSYS 623
++H H+P SG PS S
Sbjct: 473 QQHMHRPGPQRSSGQRPSGS 492
Score = 40 (19.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 484 LHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHR 518
L Q + K+K S + + D ++DEN +H+
Sbjct: 1702 LKGQKHKHKKKKSKKSKDKDKDDKEKDENGRDEHK 1736
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 604 KRHSHKPDSCSESGLEPSYSSDRKKKQK 631
+R S + S S SG +PS S R + ++
Sbjct: 482 QRSSGQRPSGSRSGWDPSTSRGRLQSER 509
Score = 38 (18.4 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 524 RLHDKKSHFSKERERRPCYQLSEVEDMPS 552
R + F + R R P Y+ E+ M S
Sbjct: 707 RSRSRTPTFHRSRSRSPSYRGREMSGMVS 735
>UNIPROTKB|J9P0A5 [details] [associations]
symbol:RBBP6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089
PROSITE:PS50158 PROSITE:PS51282 SMART:SM00184 SMART:SM00343
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00610000086096 CTD:5930 KO:K10624
OMA:HSNTIPT EMBL:AAEX03004445 RefSeq:XP_536929.2
ProteinModelPortal:J9P0A5 Ensembl:ENSCAFT00000044188 GeneID:479802
KEGG:cfa:479802 Uniprot:J9P0A5
Length = 1795
Score = 168 (64.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 232 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 287
Query: 169 LVEKA--RCPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 288 LLESDDHTCPTCHQNDVSPDALIANKFLRQAVNNF 322
Score = 81 (33.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 32/137 (23%), Positives = 53/137 (38%)
Query: 502 EQSYDD-DEDENVNIKHRYDE---AERLHDKKSHFSKER-ERRPCYQLSEVEDMPSSSSW 556
E Y++ D + NV++K ++ L DK +K+ + Q+ SS
Sbjct: 1641 EPDYNESDSESNVSVKEEETSGKVSKELKDKVVEKTKDSLDTAASVQIGTARSQSQSSPS 1700
Query: 557 HGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSES 616
+ ++S S+ K+K E+KK K K HK + +E
Sbjct: 1701 VSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKK--EKKKHKKHKKHKKHKKHAGTEV 1758
Query: 617 GLEPSYSSDRKKKQKEK 633
LE S KKK+ +K
Sbjct: 1759 ELEKSQKHKHKKKKSKK 1775
Score = 54 (24.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 28/117 (23%), Positives = 46/117 (39%)
Query: 521 EAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHS 580
E E+ + K +E P + ++ SSSS DE + +E H
Sbjct: 1049 EREKSPRSEPPLKKAKEETP-----KTDNAKSSSSSQKDEKIIGTPRKAHSKSAKE--HQ 1101
Query: 581 DSSWSRHAVKEKDGERKKLKSD-VKRHSHKPDSCSESGLEP-SYSSDRKKKQKEKDL 635
++ + +KD K +KS+ + K SE P S RK+K +EK +
Sbjct: 1102 ETKPVKEEKVKKDYS-KDVKSEKLTNKEEKAKKPSEKSKPPDSKGEKRKRKTEEKSV 1157
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 492 KQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKS-HFSKERERRPCYQLSEVEDM 550
+ K ++ + E S DE + R D R D S +K RE R + +
Sbjct: 1474 RDKKTDYDNREYSSSKRRDERNELTRRKDSPPRSKDSASGQKTKPREERDLPKKGTGDSK 1533
Query: 551 PSSSS 555
SSSS
Sbjct: 1534 KSSSS 1538
Score = 47 (21.6 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 587 HAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKK 628
H+V EK+ K+ S D SE G S S K+
Sbjct: 1411 HSVSEKENPEKRKNSAQPEKDSNLDRLSEQGNFKSLSQSSKE 1452
Score = 43 (20.2 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 574 EREQFHSDSSWSRHAVKEKDGERKKLKSDVK 604
E+ Q H + + K KD E++K K D K
Sbjct: 1761 EKSQKHKHKK--KKSKKSKDKEKEKEKDDQK 1789
Score = 42 (19.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 607 SHKPDSCS----ESGLEPSYSSDRKKKQKEKD 634
SH P S + S D KKK+K+K+
Sbjct: 1706 SHSPSGSQTRSHSSSASSAESQDSKKKKKKKE 1737
Score = 39 (18.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 486 HQDCEKKQKLSNINMSEQSYDDDEDENVNI 515
H+ +KK K S E+ DD + ++V +
Sbjct: 1766 HKHKKKKSKKSKDKEKEKEKDDQKVKSVPV 1795
Score = 38 (18.4 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 581 DSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLE 619
DS + K K+ E + D K + HK G E
Sbjct: 907 DSHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEE 945
>UNIPROTKB|Q7Z6E9 [details] [associations]
symbol:RBBP6 "E3 ubiquitin-protein ligase RBBP6"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR001878 InterPro:IPR014891
Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0005694 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005815
EMBL:CH471145 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0042787 eggNOG:COG5222
EMBL:AB112074 EMBL:AB112075 EMBL:BC029352 EMBL:BC063524
EMBL:BC073938 EMBL:BC101139 EMBL:BC101140 EMBL:BC101141
EMBL:BC101142 EMBL:BC114353 EMBL:BC114354 EMBL:BC118667
EMBL:BC139830 EMBL:AF063596 EMBL:AY072922 EMBL:AF352051 EMBL:X85133
EMBL:AK026954 EMBL:AL359564 IPI:IPI00166084 IPI:IPI00337315
IPI:IPI00376283 IPI:IPI00744671 PIR:A57640 PIR:T50609
RefSeq:NP_008841.2 RefSeq:NP_061173.1 RefSeq:NP_116015.2
UniGene:Hs.188553 PDB:2C7H PDB:2YSA PDB:2YUR PDB:3ZTG PDBsum:2C7H
PDBsum:2YSA PDBsum:2YUR PDBsum:3ZTG ProteinModelPortal:Q7Z6E9
SMR:Q7Z6E9 IntAct:Q7Z6E9 MINT:MINT-1181085 STRING:Q7Z6E9
PhosphoSite:Q7Z6E9 DMDM:74762440 PaxDb:Q7Z6E9 PRIDE:Q7Z6E9
DNASU:5930 Ensembl:ENST00000319715 Ensembl:ENST00000348022
Ensembl:ENST00000381039 Ensembl:ENST00000452655 GeneID:5930
KEGG:hsa:5930 UCSC:uc002dmg.3 UCSC:uc002dmh.3 UCSC:uc002dmi.3
UCSC:uc010bxr.3 CTD:5930 GeneCards:GC16P024458 HGNC:HGNC:9889
HPA:CAB032866 MIM:600938 neXtProt:NX_Q7Z6E9 PharmGKB:PA34253
HOVERGEN:HBG061131 InParanoid:Q7Z6E9 KO:K10624 OMA:HSNTIPT
OrthoDB:EOG44TP8G PhylomeDB:Q7Z6E9 ChiTaRS:RBBP6
EvolutionaryTrace:Q7Z6E9 GenomeRNAi:5930 NextBio:23102
PMAP-CutDB:Q7Z6E9 Bgee:Q7Z6E9 Genevestigator:Q7Z6E9
GermOnline:ENSG00000122257 Uniprot:Q7Z6E9
Length = 1792
Score = 169 (64.5 bits), Expect = 5.7e-11, Sum P(3) = 5.7e-11
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 232 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 287
Query: 169 LVEKAR--CPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 288 LLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNF 322
Score = 83 (34.3 bits), Expect = 5.7e-11, Sum P(3) = 5.7e-11
Identities = 33/138 (23%), Positives = 54/138 (39%)
Query: 502 EQSYDD-DEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDE 560
E Y++ D + NV++K D K E+ + + V+ S + H
Sbjct: 1638 EPDYNESDSESNVSVKEEESSGNISKDLKDKIV-EKAKESLDTAAVVQVGISRNQSHSSP 1696
Query: 561 XXXXXXXXXXXXNEREQFHSDSSWSRHAV----KEKDGERKKLKSDVKRHSHKPDSCSES 616
++ HS S+ S + K+K E+KK K K HK + +E
Sbjct: 1697 SVSPSRSHSPSGSQTRS-HSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEV 1755
Query: 617 GLEPSYSSDRKKKQKEKD 634
LE S KKK+ +K+
Sbjct: 1756 ELEKSQKHKHKKKKSKKN 1773
Score = 46 (21.3 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 492 KQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKS-HFSKERERRPCYQLSEVEDM 550
+ K ++ + E S DE + R D R D S +K RE R + +
Sbjct: 1471 RDKKTDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTGDSK 1530
Query: 551 PSSSS 555
S+SS
Sbjct: 1531 KSNSS 1535
Score = 43 (20.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 35/168 (20%), Positives = 60/168 (35%)
Query: 468 RTPVGVNAGRLGRSRVLHHQDCE---KKQKLSNINMSEQSYDD-DEDENVNIKHRYDEAE 523
R P GV + VL +D + + + +++ +S + D+ E K + D+ +
Sbjct: 961 REPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPKAKGDKTK 1020
Query: 524 RLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSS 583
R +D + KE +P E D S + + + SS
Sbjct: 1021 RKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPKTDNTKS----SS 1076
Query: 584 WSRHAVKEKDGERKKLKSDVKRHSH-KPDSCSESGLEPSYSSDRKKKQ 630
S+ K RK K H KP E ++ YS D K ++
Sbjct: 1077 SSQKDEKITGTPRKAHSKSAKEHQETKP--VKEEKVKKDYSKDVKSEK 1122
Score = 43 (20.2 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 574 EREQFHSDSSWSRHAVKEKDGERKKLKSDVK 604
E+ Q H + + K KD E++K K D K
Sbjct: 1758 EKSQKHKHKK--KKSKKNKDKEKEKEKDDQK 1786
Score = 41 (19.5 bits), Expect = 5.7e-11, Sum P(3) = 5.7e-11
Identities = 30/119 (25%), Positives = 49/119 (41%)
Query: 222 GESGIQAKDVSCAVTNLQREPELADSPSATGRGSNQIVADCDSVIRNNTGSCVNHLGADN 281
G+ K+VS +N+ + PE PS + + V+ +I++ S N ++
Sbjct: 1343 GKPASVIKNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSH--EIIQHEVKSSKNSASSEK 1400
Query: 282 SLKSCTLPYKV--KQIDAEVHGSAQPVDFKRRPVD-LDEFAECHGESQPIHVEAEFSNK 337
K+ Y V K+ + S QP K +D L+E SQ EA S+K
Sbjct: 1401 G-KTKDRDYSVLEKENPEKRKNSTQPE--KESNLDRLNEQGNFKSLSQSSK-EARTSDK 1455
Score = 38 (18.4 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 486 HQDCEKKQKLSNINMSEQSYDDDEDENVNI 515
H+ +KK K + E+ DD + ++V +
Sbjct: 1763 HKHKKKKSKKNKDKEKEKEKDDQKVKSVTV 1792
Score = 37 (18.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 587 HAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKK 628
++V EK+ K+ S D +E G S S K+
Sbjct: 1408 YSVLEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKE 1449
Score = 37 (18.1 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 528 KKSHFSKERERRP 540
KKS+ S R+R+P
Sbjct: 1530 KKSNSSPSRDRKP 1542
>MGI|MGI:894835 [details] [associations]
symbol:Rbbp6 "retinoblastoma binding protein 6" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001878 InterPro:IPR014891
Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 UniPathway:UPA00143
MGI:MGI:894835 Prosite:PS00518 GO:GO:0005737 GO:GO:0005694
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005815 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:4.10.60.10 GO:GO:0042787 eggNOG:COG5222
GeneTree:ENSGT00610000086096 CTD:5930 KO:K10624 OMA:HSNTIPT
OrthoDB:EOG44TP8G ChiTaRS:RBBP6 EMBL:AK045635 EMBL:AK079129
EMBL:AK081261 EMBL:AK144758 EMBL:AK160656 EMBL:AK161231
EMBL:AC125221 EMBL:BC025874 EMBL:U83913 EMBL:U28789 IPI:IPI00153709
IPI:IPI00551082 IPI:IPI00551482 PIR:T42727 RefSeq:NP_035377.2
RefSeq:NP_778188.1 UniGene:Mm.4480 ProteinModelPortal:P97868
SMR:P97868 STRING:P97868 PhosphoSite:P97868 PaxDb:P97868
PRIDE:P97868 Ensembl:ENSMUST00000052135 Ensembl:ENSMUST00000071590
Ensembl:ENSMUST00000098062 GeneID:19647 KEGG:mmu:19647
UCSC:uc009jow.2 UCSC:uc009joy.2 HOVERGEN:HBG093889
InParanoid:P97868 NextBio:296898 Bgee:P97868 CleanEx:MM_RBBP6
Genevestigator:P97868 GermOnline:ENSMUSG00000030779 Uniprot:P97868
Length = 1790
Score = 169 (64.5 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 233 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 288
Query: 169 LVEKAR--CPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 289 LLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNF 323
Score = 76 (31.8 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 31/136 (22%), Positives = 52/136 (38%)
Query: 502 EQSYDD-DEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDE 560
E Y++ D + NV++K A D K +++ + + S S
Sbjct: 1638 EPDYNESDSESNVSVKEEEAVASISKDLKEKTTEKAKESLTVATASQPGADRSQSQSSPS 1697
Query: 561 XXXXXXXXXXXXNEREQFHSDSS-WSRHAVKEKDG-ERKKLKSDVKRHSHKPDSCSESGL 618
R S SS S+ + K+K E+KK K K HK + ++ +
Sbjct: 1698 VSPSRSHSPSGSQTRSHSSSASSAGSQDSKKKKKKKEKKKHKKHKKHKKHKKHAGADGDV 1757
Query: 619 EPSYSSDRKKKQKEKD 634
E S KKK+ +K+
Sbjct: 1758 EKSQKHKHKKKKAKKN 1773
Score = 52 (23.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 28/115 (24%), Positives = 49/115 (42%)
Query: 528 KKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRH 587
+KS S+ ++ + ++++ + SSS DE + +E H ++ +
Sbjct: 1051 EKSPRSEPPLKKAKEEATKIDSVKPSSSSQKDEKVTGTPRKAHSKSAKE--HQEA---KP 1105
Query: 588 AVKEKDGERKKLKSDVKRHSHKPDSCSESGLEP-------SYSSDRKKKQKEKDL 635
A EK +K D+K S KP S E +P S RK+K +EK +
Sbjct: 1106 AKDEK--VKKDCSKDIK--SEKPASKDEKAKKPEKNKLLDSKGEKRKRKTEEKSV 1156
Score = 45 (20.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 491 KKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERER 538
KK K + D D +++ KH+ +A++ DK+ ++ R
Sbjct: 1739 KKHKKHKKHKKHAGADGDVEKSQKHKHKKKKAKKNKDKEKEKDDQKVR 1786
Score = 45 (20.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 27/137 (19%), Positives = 48/137 (35%)
Query: 506 DDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGD------ 559
D D+ E K + D+ +R D + K+ +P E D S +
Sbjct: 1004 DKDKREKDKPKVKSDKTKRKSDGSATAKKDNVLKPSKGPQEKVDGDREKSPRSEPPLKKA 1063
Query: 560 --EXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESG 617
E +++++ + + H+ K+ + K D K K D +
Sbjct: 1064 KEEATKIDSVKPSSSSQKDEKVTGTPRKAHSKSAKEHQEAKPAKDEKV---KKDCSKDIK 1120
Query: 618 LEPSYSSDRKKKQKEKD 634
E S D K K+ EK+
Sbjct: 1121 SEKPASKDEKAKKPEKN 1137
Score = 39 (18.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 581 DSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLE 619
DS ++ K K+ E + + D K + HK G E
Sbjct: 907 DSHNAKDNPKSKEKESENVPGDGKGNKHKKHRKRRKGEE 945
>UNIPROTKB|F1M6Y5 [details] [associations]
symbol:Rbbp6 "Protein Rbbp6" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089
PROSITE:PS50158 PROSITE:PS51282 SMART:SM00184 SMART:SM00343
RGD:1311964 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:4.10.60.10
GeneTree:ENSGT00610000086096 IPI:IPI00560544
Ensembl:ENSRNOT00000049430 NextBio:659878 ArrayExpress:F1M6Y5
Uniprot:F1M6Y5
Length = 1755
Score = 169 (64.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 233 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 288
Query: 169 LVEKAR--CPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 289 LLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNF 323
Score = 71 (30.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 32/140 (22%), Positives = 60/140 (42%)
Query: 502 EQSYDD-DEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDE 560
E Y++ D + NV++K +EA + SK+ + + + +E ++ ++S D
Sbjct: 1603 EPDYNESDSESNVSVKE--EEAV------ASVSKDLKEKATEKATESLNVATASQPGADR 1654
Query: 561 XXXXXXXXXXXXNERE----QFHSDSSWSRHAVKEKDGERKKLKSDVKRHS-HKPDSCSE 615
Q S SS S + + +D ++KK K D K+H HK +
Sbjct: 1655 SQSQSSPSVSPSRSHSPSGSQTRSHSS-SASSAESQDSKKKKKKKDKKKHKKHKKHKKHK 1713
Query: 616 --SGLEPSYSSDRKKKQKEK 633
+G++ +K K K+K
Sbjct: 1714 KHAGVDGDVEKSQKHKHKKK 1733
Score = 61 (26.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 41/182 (22%), Positives = 69/182 (37%)
Query: 468 RTPVGVNAGRLGRSRVLHHQDCEK----KQKLSNINMSEQSYDDDEDENVNIKHRYDEAE 523
R+ G + GR++ H EK K+K S I ++S D E + K+ ++
Sbjct: 1355 RSSKGSVSSEKGRAKDRDHSASEKDNPDKRKTS-IQPDKESTVDRLSEQGHFKNLSQSSK 1413
Query: 524 RLHDKKSHFS----KERERRPCY-QLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQF 578
+ H S ++ P + ++ + SSS DE ++
Sbjct: 1414 ETRTSEKHESVRGSSNKDFTPGRDKKTDYDSRDYSSSKRRDERSELTRRKDSPPRSKDSL 1473
Query: 579 HSDSSWSRHA--VKEKDGERKKLKS----DVKRHSHKPDSCSESGLEPSYSSDRKK-KQK 631
S R + +K E KK S D K H HK ++ E + S D+ K++
Sbjct: 1474 SGQKSKLREEKDLPKKGTELKKSNSSPPRDKKPHDHKASYETKRSCEETKSVDKNAGKER 1533
Query: 632 EK 633
EK
Sbjct: 1534 EK 1535
Score = 51 (23.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 29/115 (25%), Positives = 49/115 (42%)
Query: 528 KKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRH 587
+KS S+ ++ + ++V+ + SSS DE + +E H ++
Sbjct: 1017 EKSPRSEPPLKKAKEEATKVDSVKPSSS-QKDEKVTGTPRKAHSKSAKE--HQEAK---- 1069
Query: 588 AVKEKDGERKKLKSDVKRHSHKPDSCSESGLEP-------SYSSDRKKKQKEKDL 635
VKE+ +K D+K S KP S E +P S RK+K +EK +
Sbjct: 1070 PVKEEKA-KKDCSKDIK--SEKPASKDEKAKKPEKNKLLESKGEKRKRKTEEKSV 1121
Score = 46 (21.3 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 26/136 (19%), Positives = 48/136 (35%)
Query: 506 DDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGD------ 559
+ D+ E K + D+ +R D + KE +P + D S +
Sbjct: 970 EKDKREKDKPKVKSDKTKRKSDGSATAKKENVLKPSKGPQDKVDGDREKSPRSEPPLKKA 1029
Query: 560 -EXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGL 618
E +++++ + + H+ K+ + K VK K D +
Sbjct: 1030 KEEATKVDSVKPSSSQKDEKVTGTPRKAHSKSAKEHQEAK---PVKEEKAKKDCSKDIKS 1086
Query: 619 EPSYSSDRKKKQKEKD 634
E S D K K+ EK+
Sbjct: 1087 EKPASKDEKAKKPEKN 1102
Score = 46 (21.3 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 37/156 (23%), Positives = 61/156 (39%)
Query: 483 VLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERL--HDKKSHFSKERERRP 540
V+ H+ K +S SE+ D D + + K D+ + DK+S + E+
Sbjct: 1349 VIQHELRSSKGSVS----SEKGRAKDRDHSASEKDNPDKRKTSIQPDKESTVDRLSEQGH 1404
Query: 541 CYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHS-DSSWSRHAVKEKDGERKKL 599
LS+ +S H +++ + S D S S K +D ER +L
Sbjct: 1405 FKNLSQSSKETRTSEKHESVRGSSNKDFTPGRDKKTDYDSRDYSSS----KRRD-ERSEL 1459
Query: 600 KSDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEKDL 635
+R P S + S S + K ++EKDL
Sbjct: 1460 ---TRRKDSPPRS------KDSLSGQKSKLREEKDL 1486
Score = 46 (21.3 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 607 SHKPDSCS----ESGLEPSYSSDRKKKQKEKD 634
SH P S + S D KKK+K+KD
Sbjct: 1668 SHSPSGSQTRSHSSSASSAESQDSKKKKKKKD 1699
Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 491 KKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKK 529
KK K + D D +++ KH+ +A++ DK+
Sbjct: 1704 KKHKKHKKHKKHAGVDGDVEKSQKHKHKKKKAKKNKDKE 1742
Score = 39 (18.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 19/83 (22%), Positives = 28/83 (33%)
Query: 581 DSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSC------SESGLEPSYSSDRKKKQKEKD 634
DS + K K+ E + + D K + HK SES L P +K ++
Sbjct: 873 DSHNPKDNPKSKEKESENVPGDGKGNKHKKHRKRRKGEESESFLNPELLETSRKSRESSG 932
Query: 635 LXXXXXXXXXXXXXMDDE-PSHD 656
+ DD P D
Sbjct: 933 IDETKTDALFVLPSRDDATPVRD 955
Score = 39 (18.8 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 15/76 (19%), Positives = 27/76 (35%)
Query: 479 GRSRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERER 538
G R H + ++ Q+ + + D +D DE + +K + E+
Sbjct: 1052 GTPRKAHSKSAKEHQEAKPVKEEKAKKDCSKDIKSEKPASKDEKAKKPEKNKLLESKGEK 1111
Query: 539 RPCYQLSEVEDMPSSS 554
R + D SSS
Sbjct: 1112 RKRKTEEKSVDFESSS 1127
Score = 38 (18.4 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 586 RHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQK-EKDL 635
++ + E GE++K K++ K + S S +E + K+K E D+
Sbjct: 1101 KNKLLESKGEKRKRKTEEKSVDFESSSMKISKVEGTEIVKPSPKRKMEGDV 1151
>UNIPROTKB|G3V953 [details] [associations]
symbol:Rbbp6 "Retinoblastoma binding protein 6, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089
PROSITE:PS50158 PROSITE:PS51282 SMART:SM00184 SMART:SM00343
RGD:1311964 GO:GO:0005634 GO:GO:0046872 EMBL:CH473956 GO:GO:0008270
GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:4.10.60.10 GeneTree:ENSGT00610000086096 CTD:5930 KO:K10624
NextBio:659878 RefSeq:XP_001076339.1 RefSeq:XP_219296.3
UniGene:Rn.95305 ProteinModelPortal:G3V953
Ensembl:ENSRNOT00000035770 GeneID:308968 KEGG:rno:308968
Uniprot:G3V953
Length = 1789
Score = 169 (64.5 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 233 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 288
Query: 169 LVEKAR--CPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 289 LLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNF 323
Score = 71 (30.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 32/140 (22%), Positives = 60/140 (42%)
Query: 502 EQSYDD-DEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDE 560
E Y++ D + NV++K +EA + SK+ + + + +E ++ ++S D
Sbjct: 1637 EPDYNESDSESNVSVKE--EEAV------ASVSKDLKEKATEKATESLNVATASQPGADR 1688
Query: 561 XXXXXXXXXXXXNERE----QFHSDSSWSRHAVKEKDGERKKLKSDVKRHS-HKPDSCSE 615
Q S SS S + + +D ++KK K D K+H HK +
Sbjct: 1689 SQSQSSPSVSPSRSHSPSGSQTRSHSS-SASSAESQDSKKKKKKKDKKKHKKHKKHKKHK 1747
Query: 616 --SGLEPSYSSDRKKKQKEK 633
+G++ +K K K+K
Sbjct: 1748 KHAGVDGDVEKSQKHKHKKK 1767
Score = 61 (26.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 41/182 (22%), Positives = 69/182 (37%)
Query: 468 RTPVGVNAGRLGRSRVLHHQDCEK----KQKLSNINMSEQSYDDDEDENVNIKHRYDEAE 523
R+ G + GR++ H EK K+K S I ++S D E + K+ ++
Sbjct: 1389 RSSKGSVSSEKGRAKDRDHSASEKDNPDKRKTS-IQPDKESTVDRLSEQGHFKNLSQSSK 1447
Query: 524 RLHDKKSHFS----KERERRPCY-QLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQF 578
+ H S ++ P + ++ + SSS DE ++
Sbjct: 1448 ETRTSEKHESVRGSSNKDFTPGRDKKTDYDSRDYSSSKRRDERSELTRRKDSPPRSKDSL 1507
Query: 579 HSDSSWSRHA--VKEKDGERKKLKS----DVKRHSHKPDSCSESGLEPSYSSDRKK-KQK 631
S R + +K E KK S D K H HK ++ E + S D+ K++
Sbjct: 1508 SGQKSKLREEKDLPKKGTELKKSNSSPPRDKKPHDHKASYETKRSCEETKSVDKNAGKER 1567
Query: 632 EK 633
EK
Sbjct: 1568 EK 1569
Score = 51 (23.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 29/115 (25%), Positives = 49/115 (42%)
Query: 528 KKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRH 587
+KS S+ ++ + ++V+ + SSS DE + +E H ++
Sbjct: 1051 EKSPRSEPPLKKAKEEATKVDSVKPSSS-QKDEKVTGTPRKAHSKSAKE--HQEAK---- 1103
Query: 588 AVKEKDGERKKLKSDVKRHSHKPDSCSESGLEP-------SYSSDRKKKQKEKDL 635
VKE+ +K D+K S KP S E +P S RK+K +EK +
Sbjct: 1104 PVKEEKA-KKDCSKDIK--SEKPASKDEKAKKPEKNKLLESKGEKRKRKTEEKSV 1155
Score = 46 (21.3 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 26/136 (19%), Positives = 48/136 (35%)
Query: 506 DDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGD------ 559
+ D+ E K + D+ +R D + KE +P + D S +
Sbjct: 1004 EKDKREKDKPKVKSDKTKRKSDGSATAKKENVLKPSKGPQDKVDGDREKSPRSEPPLKKA 1063
Query: 560 -EXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGL 618
E +++++ + + H+ K+ + K VK K D +
Sbjct: 1064 KEEATKVDSVKPSSSQKDEKVTGTPRKAHSKSAKEHQEAK---PVKEEKAKKDCSKDIKS 1120
Query: 619 EPSYSSDRKKKQKEKD 634
E S D K K+ EK+
Sbjct: 1121 EKPASKDEKAKKPEKN 1136
Score = 46 (21.3 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 37/156 (23%), Positives = 61/156 (39%)
Query: 483 VLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERL--HDKKSHFSKERERRP 540
V+ H+ K +S SE+ D D + + K D+ + DK+S + E+
Sbjct: 1383 VIQHELRSSKGSVS----SEKGRAKDRDHSASEKDNPDKRKTSIQPDKESTVDRLSEQGH 1438
Query: 541 CYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHS-DSSWSRHAVKEKDGERKKL 599
LS+ +S H +++ + S D S S K +D ER +L
Sbjct: 1439 FKNLSQSSKETRTSEKHESVRGSSNKDFTPGRDKKTDYDSRDYSSS----KRRD-ERSEL 1493
Query: 600 KSDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEKDL 635
+R P S + S S + K ++EKDL
Sbjct: 1494 ---TRRKDSPPRS------KDSLSGQKSKLREEKDL 1520
Score = 46 (21.3 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 607 SHKPDSCS----ESGLEPSYSSDRKKKQKEKD 634
SH P S + S D KKK+K+KD
Sbjct: 1702 SHSPSGSQTRSHSSSASSAESQDSKKKKKKKD 1733
Score = 43 (20.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 491 KKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKK 529
KK K + D D +++ KH+ +A++ DK+
Sbjct: 1738 KKHKKHKKHKKHAGVDGDVEKSQKHKHKKKKAKKNKDKE 1776
Score = 39 (18.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 19/83 (22%), Positives = 28/83 (33%)
Query: 581 DSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSC------SESGLEPSYSSDRKKKQKEKD 634
DS + K K+ E + + D K + HK SES L P +K ++
Sbjct: 907 DSHNPKDNPKSKEKESENVPGDGKGNKHKKHRKRRKGEESESFLNPELLETSRKSRESSG 966
Query: 635 LXXXXXXXXXXXXXMDDE-PSHD 656
+ DD P D
Sbjct: 967 IDETKTDALFVLPSRDDATPVRD 989
Score = 39 (18.8 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 15/76 (19%), Positives = 27/76 (35%)
Query: 479 GRSRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERER 538
G R H + ++ Q+ + + D +D DE + +K + E+
Sbjct: 1086 GTPRKAHSKSAKEHQEAKPVKEEKAKKDCSKDIKSEKPASKDEKAKKPEKNKLLESKGEK 1145
Query: 539 RPCYQLSEVEDMPSSS 554
R + D SSS
Sbjct: 1146 RKRKTEEKSVDFESSS 1161
Score = 38 (18.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 586 RHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQK-EKDL 635
++ + E GE++K K++ K + S S +E + K+K E D+
Sbjct: 1135 KNKLLESKGEKRKRKTEEKSVDFESSSMKISKVEGTEIVKPSPKRKMEGDV 1185
>UNIPROTKB|F1RFD8 [details] [associations]
symbol:RBBP6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001878 InterPro:IPR014891
Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0042787 GeneTree:ENSGT00610000086096 OMA:HSNTIPT
EMBL:FP089532 Ensembl:ENSSSCT00000008580 Uniprot:F1RFD8
Length = 1728
Score = 168 (64.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 232 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 287
Query: 169 LVEKA--RCPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 288 LLESDDHTCPTCHQNDVSPDALIANKFLRQAVNNF 322
Score = 62 (26.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 32/152 (21%), Positives = 59/152 (38%)
Query: 481 SRVLHHQDCEKKQKLS-NINMSEQSYDDDEDENVNIKHRYDEAERLH--DKKSHFSKERE 537
++ + H+ + + K S N SE+ D D +V K D+ + +K S+ + E
Sbjct: 1377 TKEVSHEITQHEVKSSKNCTSSEKGKTKDRDHSVTEKENPDKRKTSAQPEKDSNLDRLNE 1436
Query: 538 RRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERK 597
+ LS+ +S H D +++ + + +S + K +D ER
Sbjct: 1437 QGTFKSLSQSSKETRTSDKH-DSIRGSSNKDFTPNRDKKTDYDNREYS--SSKRRD-ERN 1492
Query: 598 KLKSDVKRHSHKPDSCSESGLEPSYSSDRKKK 629
+L S +S S +P D KK
Sbjct: 1493 ELTRRKDSPSRSKESTSGQKTKPREERDLSKK 1524
Score = 43 (20.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 25/117 (21%), Positives = 42/117 (35%)
Query: 502 EQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEX 561
++ D D E + K R DE L +K S+ +E + E+ S GD
Sbjct: 1472 DKKTDYDNREYSSSKRR-DERNELTRRKDSPSRSKESTSGQKTKPREERDLSKKGTGDPK 1530
Query: 562 XXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGE--RKKLKSDVKRHSHKPDSCSES 616
+ D+ S K D +++ K ++ S+K S S+S
Sbjct: 1531 KSNSSPSRDKKPHDHKATYDTKRSSEETKSVDKNPCKEREKHVLEAKSNKESSGSKS 1587
Score = 40 (19.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 573 NEREQFHS-DSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLE 619
N E+ S DS + K K+ E + D K + HK G E
Sbjct: 896 NYPEKLSSRDSHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEE 943
>TAIR|locus:2171569 [details] [associations]
symbol:AT5G47430 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR001841
InterPro:IPR001878 InterPro:IPR014891 Pfam:PF08783 PROSITE:PS51282
SMART:SM00184 SMART:SM00343 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10624 EMBL:AK316913
IPI:IPI00547250 RefSeq:NP_199554.2 UniGene:At.29893
ProteinModelPortal:B9DFV2 SMR:B9DFV2 PRIDE:B9DFV2
EnsemblPlants:AT5G47430.1 GeneID:834790 KEGG:ath:AT5G47430
TAIR:At5g47430 HOGENOM:HOG000015179 OMA:IISKSMC PhylomeDB:B9DFV2
ProtClustDB:CLSN2699121 Genevestigator:B9DFV2 Uniprot:B9DFV2
Length = 892
Score = 167 (63.8 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 48/143 (33%), Positives = 73/143 (51%)
Query: 132 GNFPSELKCSLCNTLFKEAVMIP-CCQHSFCEKCIRLVLVEKARCPKCFSSKCRLEDLLP 190
G P ELKC LC + K+A + CC SFC+KCIR ++ K+ C C S +DLLP
Sbjct: 287 GELPPELKCPLCKEVMKDAALTSKCCYKSFCDKCIRDHIISKSMCV-CGRSDVLADDLLP 345
Query: 191 NVSLRQAIEHFLESQILISGSENAYH-RYAPDGESGI----QAKDVSCAVTNL-QREPEL 244
N +LR I LE+ +EN + PD ES +A + +V + +++P L
Sbjct: 346 NKTLRDTINRILEAGN--DSTENVGSVGHIPDLESARCPPPKALSPTTSVASKGEKKPVL 403
Query: 245 ADSPSATGRGSNQIVADCDSVIR 267
+++ A+ + VA+ S R
Sbjct: 404 SNNNDASTLKAPMEVAEITSAPR 426
Score = 54 (24.1 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 40/167 (23%), Positives = 58/167 (34%)
Query: 379 PAALSPNPMLQQGALRGHAPPFWNG--PSLAHVRPIANIYGNHGMMP-FNATMAPTTQFA 435
P P+ M+Q G P ++NG P V+P G +G+ P FN F
Sbjct: 496 PDLAGPDYMMQMGP----GPQYFNGMQPGFNGVQP-----GFNGVQPGFNGFHPGFNGFG 546
Query: 436 --VPAYMPSMFGGIPAYGFD-MEASCSGYTMMGGPRTPVGVNAGRLGRSRVLH-HQDCEK 491
P MP G YG + M+ G M P P A G + H+D +
Sbjct: 547 GPFPGAMPPFMG----YGLNPMDMGFGGGMNMMHP-DPF--MAQGFGFPNIPPPHRDLAE 599
Query: 492 KQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERER 538
N+ + D+ E N + + + R K E R
Sbjct: 600 MGNRMNLQRAMMGRDEAEARNAEMLRKRENERRPEGGKMFRDGENSR 646
Score = 52 (23.4 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 39/186 (20%), Positives = 69/186 (37%)
Query: 503 QSYDDDED-ENVNIKHRYDEAERLHDK-KSHFSKERERRPCYQLSEVEDMPSSSSWHG-- 558
+ Y D+ D + + R+ + +R HD+ + ++R R + E E S H
Sbjct: 708 ERYPDERDRQRDRERSRHQDVDREHDRTRDRRDEDRSRDHRHHRGETE---RSQHHHRKR 764
Query: 559 DEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKD---GERKKLKSDVKRHSHKPDSCSE 615
E E E S ++R + E++ G+R+K+ S P + +
Sbjct: 765 SEPPSSEPPVPATKAEIENNLKSSVFARISFPEEETSSGKRRKVPSSSSTSVTDPSASAS 824
Query: 616 SGLEPSYSSDRKKKQKEKDLXXXXXXXXXXXXXMDDEPS-HDRWLMVKGSDEDHGEDYRY 674
+ S R +KE ++ +PS + R V SD + RY
Sbjct: 825 AAAAVGTSVHRHSSRKEIEVADYESSDEDRHFKR--KPSRYARSPPVVVSDVSE-DKLRY 881
Query: 675 SERKSG 680
S+R G
Sbjct: 882 SKRGKG 887
Score = 44 (20.5 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 19 PSQPKIEEINFDDFGVDL 36
PS + E +D+FG DL
Sbjct: 110 PSAAEFPEDEYDEFGTDL 127
>FB|FBgn0086129 [details] [associations]
symbol:snama "something that sticks like glue" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035736 "cell proliferation involved in compound
eye morphogenesis" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 EMBL:AE013599
GO:GO:0005634 GO:GO:0006915 GO:GO:0022008 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:4.10.60.10 eggNOG:COG5222 GeneTree:ENSGT00610000086096
KO:K10624 EMBL:AF132177 RefSeq:NP_611884.1 UniGene:Dm.3196
SMR:Q9XZ21 IntAct:Q9XZ21 MINT:MINT-916562
EnsemblMetazoa:FBtr0072249 GeneID:37857 KEGG:dme:Dmel_CG3231
UCSC:CG3231-RA CTD:37857 FlyBase:FBgn0086129 InParanoid:Q9XZ21
OMA:FNRIMKE OrthoDB:EOG4GB5NG GenomeRNAi:37857 NextBio:805727
GO:GO:0035736 Uniprot:Q9XZ21
Length = 1231
Score = 176 (67.0 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 128 AMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEK--ARCPKCFSSKCRL 185
A++N P +L C +C +F +AVMIPCC SFC+ C+R L+E + CP C C
Sbjct: 205 AVQNQEIPEDLICGICRDIFVDAVMIPCCGSSFCDDCVRTSLLESEDSECPDCKEKNCSP 264
Query: 186 EDLLPNVSLRQAIEHF 201
L+PN LR ++ F
Sbjct: 265 GSLIPNRFLRNSVNAF 280
Score = 50 (22.7 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 615 ESGLEPSYSSDRKKKQKEKD 634
E+ + S DRKKK+K+KD
Sbjct: 806 ENKAKSPLSKDRKKKKKDKD 825
Score = 46 (21.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 590 KEKD-GERKKLKSDVKRHSHKPDSCSESGLEPSYSSD 625
K+KD ERKK K D + K D +S SD
Sbjct: 822 KDKDKAERKKNKKDKRAKKEKGDRQKKSSSVNRSDSD 858
Score = 46 (21.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 574 EREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKK 629
ER++ S RH + D +R + KS + + D+ + P S +RK++
Sbjct: 561 ERKKVDRFRSSDRHRSRSPDRQRHRFKSPMYEKDNSRDNLKDK--RPR-SRERKRE 613
Score = 43 (20.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 589 VKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEKD 634
V E + E ++K + ++ S S P + + QKEKD
Sbjct: 313 VAEVEPEETEVKPEKQKESETNGSNPPKSESPEPPATTEPSQKEKD 358
Score = 43 (20.2 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 22/95 (23%), Positives = 36/95 (37%)
Query: 586 RHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEK-DLXXXXXXXXX 644
+ A KEK G+R+K S V R ++ S E +Y + Q ++
Sbjct: 836 KRAKKEK-GDRQKKSSSVNRSDSDINNSSLMN-ESNYKVLSPRAQSPSIEINAAQLSPTH 893
Query: 645 XXXXMDDEPSHDRWLMVKGSDEDHGEDYRYSERKS 679
+ SH + SD++ G + SE S
Sbjct: 894 NATENVNPKSHSILTVGAASDDNLGPRSKLSEANS 928
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 36/147 (24%), Positives = 54/147 (36%)
Query: 491 KKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDM 550
K+Q S +Q+ DD D + ++ + + + + RP + D
Sbjct: 1100 KEQSESKHGKHDQNNSDDSDRRAAKNTKSSDSRVVSSVTAVVAPPKPCRPDNPFRKFVDT 1159
Query: 551 PSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKP 610
SSSS ++E SD+ K++D KKLK K S
Sbjct: 1160 SSSSS---------LVVKYDNTIQKEGASSDNGMEHR--KQRD---KKLKKHSKYSS--T 1203
Query: 611 DSC-SESGLEPSY---SSDRKKKQKEK 633
DS SE +P S KKK+K K
Sbjct: 1204 DSLKSEKRKDPKSKKKSKILKKKKKSK 1230
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 26/152 (17%), Positives = 55/152 (36%)
Query: 483 VLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCY 542
+++ +D K + + + S + + ++K R + +D+ K + RR
Sbjct: 988 IINSKDNSKDRSVVRSDKDRSSSPRRNNSSRSVKDRLG-TKISNDRSRSRDKSKGRRRAA 1046
Query: 543 QLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKLKSD 602
+ S+ + S HG +E+ Q E+ +R + D
Sbjct: 1047 RSSDDDANRGRSDRHGSRKRDNRSRDRAAPSEKRQ-------------ERSYKRSSPEDD 1093
Query: 603 VKRHSHKPDSCSESGLEPSYSSDRKKKQKEKD 634
R +K S S+ G +SD ++ K+
Sbjct: 1094 KLRRQNKEQSESKHGKHDQNNSDDSDRRAAKN 1125
Score = 41 (19.5 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 502 EQSYDDDEDENVNIKHRYDEAER--LHDKKS----HFSKERERR 539
+ YD D ++N+ IK A+ + K+S H S+ RR
Sbjct: 357 KDKYDSDYEDNITIKMPQPAADSTTVPSKRSPSYSHRSESSHRR 400
Score = 38 (18.4 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 581 DSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEP 620
DSS R + ++ RK+ +S KP+ + L P
Sbjct: 710 DSSKKRGENRHEEAPRKRHRSRSISKEPKPNDSNYRSLTP 749
>UNIPROTKB|E2RP24 [details] [associations]
symbol:RBBP6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089
PROSITE:PS50158 PROSITE:PS51282 SMART:SM00184 SMART:SM00343
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00610000086096 EMBL:AAEX03004445
Ensembl:ENSCAFT00000027846 NextBio:20854929 Uniprot:E2RP24
Length = 1707
Score = 168 (64.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 232 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 287
Query: 169 LVEKA--RCPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 288 LLESDDHTCPTCHQNDVSPDALIANKFLRQAVNNF 322
Score = 54 (24.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 28/117 (23%), Positives = 46/117 (39%)
Query: 521 EAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHS 580
E E+ + K +E P + ++ SSSS DE + +E H
Sbjct: 1049 EREKSPRSEPPLKKAKEETP-----KTDNAKSSSSSQKDEKIIGTPRKAHSKSAKE--HQ 1101
Query: 581 DSSWSRHAVKEKDGERKKLKSD-VKRHSHKPDSCSESGLEP-SYSSDRKKKQKEKDL 635
++ + +KD K +KS+ + K SE P S RK+K +EK +
Sbjct: 1102 ETKPVKEEKVKKDYS-KDVKSEKLTNKEEKAKKPSEKSKPPDSKGEKRKRKTEEKSV 1157
Score = 48 (22.0 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 492 KQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKS-HFSKERERRPCYQLSEVEDM 550
+ K ++ + E S DE + R D R D S +K RE R + +
Sbjct: 1460 RDKKTDYDNREYSSSKRRDERNELTRRKDSPPRSKDSASGQKTKPREERDLPKKGTGDSK 1519
Query: 551 PSSSS 555
SSSS
Sbjct: 1520 KSSSS 1524
Score = 47 (21.6 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 587 HAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKK 628
H+V EK+ K+ S D SE G S S K+
Sbjct: 1397 HSVSEKENPEKRKNSAQPEKDSNLDRLSEQGNFKSLSQSSKE 1438
Score = 38 (18.4 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 581 DSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLE 619
DS + K K+ E + D K + HK G E
Sbjct: 907 DSHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEE 945
>UNIPROTKB|H3BSK8 [details] [associations]
symbol:RBBP6 "E3 ubiquitin-protein ligase RBBP6"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50089
PROSITE:PS50158 SMART:SM00184 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:4.10.60.10 SUPFAM:SSF57756 HGNC:HGNC:9889 ChiTaRS:RBBP6
EMBL:AC010321 Ensembl:ENST00000564314 Bgee:H3BSK8 Uniprot:H3BSK8
Length = 1008
Score = 169 (64.5 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 99 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 154
Query: 169 LVEKAR--CPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 155 LLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNF 189
Score = 43 (20.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 35/168 (20%), Positives = 60/168 (35%)
Query: 468 RTPVGVNAGRLGRSRVLHHQDCE---KKQKLSNINMSEQSYDD-DEDENVNIKHRYDEAE 523
R P GV + VL +D + + + +++ +S + D+ E K + D+ +
Sbjct: 828 REPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPKAKGDKTK 887
Query: 524 RLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSS 583
R +D + KE +P E D S + + + SS
Sbjct: 888 RKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPKTDNTKS----SS 943
Query: 584 WSRHAVKEKDGERKKLKSDVKRHSH-KPDSCSESGLEPSYSSDRKKKQ 630
S+ K RK K H KP E ++ YS D K ++
Sbjct: 944 SSQKDEKITGTPRKAHSKSAKEHQETKP--VKEEKVKKDYSKDVKSEK 989
>WB|WBGene00009477 [details] [associations]
symbol:tag-214 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 GO:GO:0005634
GO:GO:0009792 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0001703 eggNOG:COG5222
GeneTree:ENSGT00610000086096 EMBL:Z81532 PIR:T21861
RefSeq:NP_001032975.1 ProteinModelPortal:O62235 SMR:O62235
PaxDb:O62235 PRIDE:O62235 EnsemblMetazoa:F36F2.3a GeneID:172720
KEGG:cel:CELE_F36F2.3 UCSC:F36F2.3b CTD:172720 WormBase:F36F2.3a
HOGENOM:HOG000019649 InParanoid:O62235 OMA:RIRIGLK NextBio:876727
Uniprot:O62235
Length = 1128
Score = 136 (52.9 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 124 TNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCI--RLVLVEKARCPKCFSS 181
+++ A + P EL C +C +LFKEA++ CC +S+C CI R++ + +CP
Sbjct: 227 SSSPAQTSRKVPPELLCPICQSLFKEAIVTSCCGNSYCADCIEARILDPDNQKCPGADCG 286
Query: 182 K-CRLEDLLPNVSLRQAIEHFLES 204
K + ++PN +LR A +L +
Sbjct: 287 KDISITSIIPNKTLRDAAAAWLSA 310
Score = 86 (35.3 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 33/152 (21%), Positives = 60/152 (39%)
Query: 490 EKKQKLSNINMSEQS-YDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVE 548
+K++K N E+ ++D ++E R D +R HD + + R R ++ E +
Sbjct: 862 KKEKKKGKWNEDEEDIFEDRKEELPKESDRRDRKDRRHDDEDDRKERRHERDSQKIDEQD 921
Query: 549 DMPSSSSWHGDEXXXXXXXXXXXXN-EREQFHSDS--SWSRHAVKEKDG-ERKKLKSDVK 604
E +RE D + R + KD E++K K
Sbjct: 922 RKKERKRDRETEAYDSDKLQAPKTKVKREDKKRDDRKDYERDRERRKDDYEKEKSKRKES 981
Query: 605 RHSHKPDSCSESGLEPSYSSDRKKKQK--EKD 634
++ + E +E + DRK+K+K EK+
Sbjct: 982 DRDNEKEKQREKEVEKEHEKDRKEKRKIVEKE 1013
Score = 78 (32.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 37/157 (23%), Positives = 59/157 (37%)
Query: 485 HHQDCE--KKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERE--RRP 540
H +D E KK+K S + + +DDE KH+ + + H +K E E +R
Sbjct: 736 HDEDVEDHKKEKESQSSTINTADEDDESSKKMKKHKKSKKNKKHHRKEEDGDEDEERKRK 795
Query: 541 CYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERK-KL 599
++ + E DE + Q D +R + D E K +L
Sbjct: 796 KHKKHKKEKKSKKEKRDEDEDDLDTEKKEKKKERKYQDDKDEDSNRKEPRSLDDEDKVEL 855
Query: 600 -KSDVKRHSHKPDSCSESGLEPSYSSDRKKK-QKEKD 634
K+ + K +E E DRK++ KE D
Sbjct: 856 DKNFADKKEKKKGKWNED--EEDIFEDRKEELPKESD 890
Score = 69 (29.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 30/154 (19%), Positives = 59/154 (38%)
Query: 485 HHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQL 544
H +D +++ ++ +E D + V EAE K+ E + P
Sbjct: 679 HEEDADEEPVDEEMD-TEVVVRDKSIDPVYQAMETSEAEVAETKEESVPVEEDEEPENHD 737
Query: 545 SEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSR-HAVKEKDGERKKLKSDV 603
+VED +++ + H S ++ H KE+DG+ + +
Sbjct: 738 EDVEDHKKEKE--SQSSTINTADEDDESSKKMKKHKKSKKNKKHHRKEEDGDEDEERKRK 795
Query: 604 KRHSHKPDSCSESGL----EPSYSSDRKKKQKEK 633
K HK + S+ E +++K+K+KE+
Sbjct: 796 KHKKHKKEKKSKKEKRDEDEDDLDTEKKEKKKER 829
Score = 67 (28.6 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 29/107 (27%), Positives = 44/107 (41%)
Query: 579 HSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSD--RKKKQKEKDLX 636
+ D + SR KD R+K + D R + DS S S + S S + R++K++EK+
Sbjct: 476 NKDRNSSRR--DHKDRTRRKDRHD-SRSRRRRDSSSSSSMSSSSSDEDERRRKRREKESS 532
Query: 637 XXXXXXXXXXXXMDDEPSHDRWLMVKGSDEDHGEDYRYSERKSGYIK 683
DE DR + + D +R R SG K
Sbjct: 533 KKRRSVEKERPRRADEHRRDR---DRDRERDRDRSHR-DVRSSGRSK 575
Score = 64 (27.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 26/140 (18%), Positives = 50/140 (35%)
Query: 496 SNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVEDMPSSSS 555
S I+ ++ ++D N + R D +R K H S+ R RR S + S
Sbjct: 464 SAISDEWNAFLQNKDRNSS---RRDHKDRTRRKDRHDSRSRRRRDSSSSSSMSSSSSDED 520
Query: 556 WHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSE 615
+ E+E+ R ++++ +R + DV+ D +
Sbjct: 521 ERRRKRREKESSKKRRSVEKERPRRADEHRRDRDRDRERDRDRSHRDVRSSGRSKDIKAS 580
Query: 616 SGLEPSYSSDRKKKQKEKDL 635
S R+K ++ D+
Sbjct: 581 SSHRRDRDDARRKDRRRDDV 600
Score = 59 (25.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 36/159 (22%), Positives = 59/159 (37%)
Query: 480 RSRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAER--LHDKKSHFSK--- 534
R R D EK++ + + + ++ V +H D E+ + +K+S +
Sbjct: 962 RDRERRKDDYEKEKSKRKESDRDNEKEKQREKEVEKEHEKDRKEKRKIVEKESEKPRKSV 1021
Query: 535 -ERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNER-EQFHSDSSWSRHAVKE- 591
ER ++ S ++ S N R Q+ S SS +E
Sbjct: 1022 HERMQKADSSTSSSSRTTTAPSLERKPVSFTVASSKPTTNIRVRQYSSSSSTKEQEDEER 1081
Query: 592 -KDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKK 629
K RKK ++DV+ K + S S P S D K K
Sbjct: 1082 SKRDRRKKDETDVESIGEK-EKKSSSRKVPKESVDVKHK 1119
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 486 HQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERR 539
H ++++ S+ + S S DEDE K R E+ + K+ KER RR
Sbjct: 496 HDSRSRRRRDSSSSSSMSSSSSDEDERRR-KRREKESSK---KRRSVEKERPRR 545
Score = 54 (24.1 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 26/145 (17%), Positives = 50/145 (34%)
Query: 480 RSRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERR 539
R R D E +K Q D+ + + + R E E K K + +R
Sbjct: 892 RDRKDRRHDDEDDRKERRHERDSQKIDEQDRKKERKRDR--ETEAYDSDKLQAPKTKVKR 949
Query: 540 PCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKL 599
+ + +D D+ + E+ + + KE + +RK+
Sbjct: 950 EDKKRDDRKDYERDRERRKDDYEKEKSKRKESDRDNEK---EKQREKEVEKEHEKDRKEK 1006
Query: 600 KSDVKRHSHKPDSCSESGLEPSYSS 624
+ V++ S KP ++ + SS
Sbjct: 1007 RKIVEKESEKPRKSVHERMQKADSS 1031
Score = 51 (23.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 29/152 (19%), Positives = 56/152 (36%)
Query: 480 RSRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYD--EAERLHDKKSHFSKERE 537
R R H+D + +I S D +D + R D + ER +K+ +++
Sbjct: 559 RDRDRSHRDVRSSGRSKDIKASSSHRRDRDDARRKDRRRDDVRKKER-REKREEEDDDQK 617
Query: 538 RRPCYQLSEVE-DMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDS-SWSRHAVKEKDGE 595
+ E E D+ + +G+ +E Q DS S +V K E
Sbjct: 618 TKDAESKDEDEIDIDGIIAEYGNVQAQDTDGDAQVADENAQNDEDSTSPKEESVSPKPDE 677
Query: 596 RKKLKSDVKRHSHKPDS---CSESGLEPSYSS 624
+ +D + + D+ + ++P Y +
Sbjct: 678 THEEDADEEPVDEEMDTEVVVRDKSIDPVYQA 709
Score = 37 (18.1 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 312 PVDLDEFAECHGESQPIHVEAEFSNKRKRGLWVDTSGADKSFIESGRNRK 361
PV+ DE E H E VE K + ++T+ D ES + K
Sbjct: 726 PVEEDEEPENHDED----VEDHKKEKESQSSTINTADEDD---ESSKKMK 768
>UNIPROTKB|E1BCZ2 [details] [associations]
symbol:RBBP6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001878 InterPro:IPR014891
Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0042787 GeneTree:ENSGT00610000086096 OMA:HSNTIPT
EMBL:DAAA02057784 IPI:IPI00716552 Ensembl:ENSBTAT00000012423
Uniprot:E1BCZ2
Length = 1723
Score = 169 (64.5 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 232 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 287
Query: 169 LVEKAR--CPKCFSSKCRLEDLLPNVSLRQAIEHF 201
L+E CP C + + L+ N LRQA+ +F
Sbjct: 288 LLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNF 322
Score = 46 (21.3 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 492 KQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKS-HFSKERERRPCYQLSEVEDM 550
+ K ++ + E S DE + R D R D S +K RE R + +
Sbjct: 1476 RDKKTDYDNREYSSSKRRDERNELTRRKDSPSRSKDSASGQKTKPREERDLPKKGTGDSK 1535
Query: 551 PSSSS 555
S+SS
Sbjct: 1536 KSNSS 1540
Score = 43 (20.2 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 573 NEREQFHS-DSSWSRHAVKEKDGERKKLKSDVKRHSHKPDSCSESGLE 619
N E+ S DS + K KD E + D K + HK G E
Sbjct: 896 NYPEKLSSRDSHNQKDNTKSKDKEGENAPGDGKGNKHKKHRKRRKGEE 943
Score = 39 (18.8 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 19/66 (28%), Positives = 27/66 (40%)
Query: 432 TQFAVPAYMPSMFGGIPAYGFDMEASCSGYTMMGG---PRT---PVGVNAGRLGRSRVLH 485
+ A+ A M +P G S G +++ G P T PV +NA R G R
Sbjct: 451 SSIAITALMEEKGYQVPVLG---TPSLLGQSLLHGQLIPTTVQGPVRINAARPGGGRPGW 507
Query: 486 HQDCEK 491
Q +K
Sbjct: 508 EQHTKK 513
>UNIPROTKB|H3BUN0 [details] [associations]
symbol:RBBP6 "E3 ubiquitin-protein ligase RBBP6"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF00098 Pfam:PF08783 PROSITE:PS50089
PROSITE:PS50158 PROSITE:PS51282 SMART:SM00184 SMART:SM00343
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:4.10.60.10
SUPFAM:SSF57756 HGNC:HGNC:9889 ChiTaRS:RBBP6 EMBL:AC010321
Ensembl:ENST00000567686 Bgee:H3BUN0 Uniprot:H3BUN0
Length = 300
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 109 KSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
K + P F+ E ++S+ E+ P EL C +C + +AV+IPCC +S+C++CIR
Sbjct: 232 KKEKPPFLPEE----PSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA 287
Query: 169 LVEKAR--CPKC 178
L+E CP C
Sbjct: 288 LLESDEHTCPTC 299
>ZFIN|ZDB-GENE-040704-3 [details] [associations]
symbol:rbck1 "RanBP-type and C3HC4-type zinc finger
containing 1" species:7955 "Danio rerio" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0071797 "LUBAC complex"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001876 InterPro:IPR002867 InterPro:IPR026261
Pfam:PF00240 Pfam:PF00641 Pfam:PF01485 PROSITE:PS01358
PROSITE:PS50089 PROSITE:PS50199 SMART:SM00184 SMART:SM00547
Prosite:PS00518 ZFIN:ZDB-GENE-040704-3 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0048701 InterPro:IPR017907 GeneTree:ENSGT00530000063620
HOGENOM:HOG000026797 HOVERGEN:HBG061515 KO:K10630 GO:GO:0071797
CTD:10616 OMA:QDIRLWV PANTHER:PTHR22770:SF10 EMBL:BX324213
EMBL:BC074096 IPI:IPI00486453 RefSeq:NP_001002168.1
UniGene:Dr.81856 SMR:Q6GMF9 Ensembl:ENSDART00000047444
GeneID:431715 KEGG:dre:431715 InParanoid:Q6GMF9 NextBio:20830951
Uniprot:Q6GMF9
Length = 515
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 46/175 (26%), Positives = 89/175 (50%)
Query: 62 RENIDTTRTSEPHNTGCQKLEASNVNEA--IRRGAVHS-RIEEDLLQTESKSDVPQFMKL 118
R + T+ P N L + +E +++ + S + E+ LLQ E ++ + +
Sbjct: 208 RPGCEMCSTARPDNYQVPDLYQPDESETRRLQQEELASLQYEQSLLQEEERNFLERQRNY 267
Query: 119 ELVIKTNASAMENGNFPSELKCSLC-NTLFK-EAVMIPCCQHSFCEKCIRLVLVE----K 172
E +++T+A ++ GN +L+C++C T+ E ++ C HSFC C++ +V +
Sbjct: 268 EELLQTDAHSLV-GN-TDQLECAICFGTIMPGEGAVLRECLHSFCRDCLKGTVVNCLDAE 325
Query: 173 ARCP---KCFSSKCRLEDL-LPNVSLRQAIEHFLESQILI--SGSENAYHRYAPD 221
CP ++ C+L+D + ++ + + FLE ++ I S SEN+YH PD
Sbjct: 326 VCCPYGDNAYACNCKLQDREIKSLLTQDEYQKFLELRLNIAESRSENSYHCKTPD 380
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 120 (47.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 101 EDLLQTESKSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSF 160
++L QT+ + + Q K E++ N +EN EL+C +C+ F EAV + C HSF
Sbjct: 20 KELEQTKEEKEKVQAQKEEVLSHMN-DVLEN-----ELQCIICSEYFIEAVTLNCA-HSF 72
Query: 161 CEKCIRLVLVEKARCPKCFSS-KCRLEDLLPNVSLRQAIEHFLESQI 206
C CI + K CP C K + L+ + + + +++ L S++
Sbjct: 73 CSYCINEWMKRKVECPICRKDIKSKTHSLVLDNCINKMVDN-LSSEV 118
>ASPGD|ASPL0000005981 [details] [associations]
symbol:AN6342 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001841 PROSITE:PS50089 GO:GO:0008270
EMBL:AACD01000107 EMBL:BN001301 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:NOG12793 RefSeq:XP_663946.1
ProteinModelPortal:Q5AZD8 EnsemblFungi:CADANIAT00006643
GeneID:2871238 KEGG:ani:AN6342.2 HOGENOM:HOG000166357 OMA:TQDEIPF
OrthoDB:EOG44J5T1 Uniprot:Q5AZD8
Length = 968
Score = 135 (52.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 34/128 (26%), Positives = 57/128 (44%)
Query: 126 ASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSSKCRL 185
AS++ P +L+C++CN L A +PCC + CE C + L + CP C +
Sbjct: 14 ASSLTQDEIPFKLRCAICNKLALNAFRLPCCDQAICENC-QASLPDT--CPVCAHTPISS 70
Query: 186 EDLLPNVSLRQAIEHFLESQILISGSENAYHRYAPDGESGIQAK-DVSCAVTNLQREPEL 244
+ PN +LR ++ FL ++ E + A SG A D + Q++ +
Sbjct: 71 DLCKPNKALRTTLKAFLRTEEKKREKERQERQEAQPAPSGTAAPADEALVRQESQQDSNV 130
Query: 245 ADSPSATG 252
+ A G
Sbjct: 131 VEETPANG 138
Score = 61 (26.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 34/158 (21%), Positives = 59/158 (37%)
Query: 477 RLGRSRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKER 536
R RSR H + + + N + D +E + K R A+ L +S K+R
Sbjct: 717 RARRSRRSHRRRSRSRSASGDRNGDSRDTDRFAEERSSSKPRSRNADTLDTHRS--GKDR 774
Query: 537 ERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGER 596
R E + S E +R++ + R +E+ ER
Sbjct: 775 SSRR----EEDRERDRDSRRRDRERDRDRDRDRDRDRDRDRIR-EKERERDRDRERPRER 829
Query: 597 KKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEKD 634
+ + ++ S + D SES + Y S + K+ +E D
Sbjct: 830 DRDRERDRKRSRR-DR-SESAADSDYHSRKAKRGREDD 865
Score = 48 (22.0 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 30/120 (25%), Positives = 41/120 (34%)
Query: 524 RLHDKKSHFSKERERRPCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXX---NEREQFHS 580
R K S+ R R P S P S S D +ER++
Sbjct: 632 RSRSKPRSRSRSRSRVPSRSSSRRRYRPRSRSVEDDATDYDRPRERRRRPHHDERDRTAE 691
Query: 581 DSSWSR------HAVKEKDGERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEKD 634
D SR H +D ER + ++ R SH+ S S S S DR ++ D
Sbjct: 692 DERRSRSPSIDSHRSSLRDKERDRRRARRSRRSHRRRSRSRSA-----SGDRNGDSRDTD 746
Score = 45 (20.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 26/152 (17%), Positives = 51/152 (33%)
Query: 490 EKKQKLSNINMSEQSYDDDE-DENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSEVE 548
E++ + +I+ S D E D + R R + + + + R + +E
Sbjct: 693 ERRSRSPSIDSHRSSLRDKERDRRRARRSRRSHRRRSRSRSASGDRNGDSRDTDRFAEER 752
Query: 549 DMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGERKKLKS-----D- 602
S + D E D SR +E+D +R + + D
Sbjct: 753 SSSKPRSRNADTLDTHRSGKDRSSRREEDRERDRD-SRRRDRERDRDRDRDRDRDRDRDR 811
Query: 603 VKRHSHKPDSCSESGLEPSYSSDRKKKQKEKD 634
++ + D E E +R +K+ +D
Sbjct: 812 IREKERERDRDRERPRERDRDRERDRKRSRRD 843
Score = 45 (20.9 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 27/121 (22%), Positives = 42/121 (34%)
Query: 487 QDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERRPCYQLSE 546
+D E+ +K S + SE + D D + R D+A + RE+ E
Sbjct: 831 RDRERDRKRSRRDRSESAADSDYHSRKAKRGREDDARTSTSNRDRPKDTREKTLLTNPPE 890
Query: 547 VEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSD-----SSWSRHAVKEKDGERKKLKS 601
E P + + RE +D SS R + +E+ G R K
Sbjct: 891 PEKDPHTL----EREARNRERLLKEQQRREAMQADRDAGKSSRRRDSRQERAGRRLNYKY 946
Query: 602 D 602
D
Sbjct: 947 D 947
Score = 41 (19.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 32/158 (20%), Positives = 60/158 (37%)
Query: 480 RSRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERLHDKKSHFSKERERR 539
RSRV ++ + + ++ + + D D + +DE +R + E ERR
Sbjct: 644 RSRVPSRSSSRRRYRPRSRSVEDDATDYDRPRERRRRPHHDERDR--------TAEDERR 695
Query: 540 PCYQLSEVEDMPSSSSWHGDEXXXXXXXXXXXXNEREQFHSDSSWSRHAVKEKDGER-KK 598
S + S S D+ + R + S S+ +D +R +
Sbjct: 696 -----SRSPSIDSHRSSLRDKERDRRRARRSRRSHRRRSRSRSASGDRNGDSRDTDRFAE 750
Query: 599 LKSDVKRHSHKPDSCS--ESGLEPSYSSDRKKKQKEKD 634
+S K S D+ SG + S R+++ +E+D
Sbjct: 751 ERSSSKPRSRNADTLDTHRSGKD---RSSRREEDRERD 785
Score = 40 (19.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 314 DLDEFAECHGESQPIHVEAEFSNKRKRGLWVDTSGADKSFIESGRN--RKDR 363
D D FAE S+P A+ + + G D S + E R+ R+DR
Sbjct: 744 DTDRFAEERSSSKPRSRNADTLDTHRSGK--DRSSRREEDRERDRDSRRRDR 793
>UNIPROTKB|K7GS78 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Prosite:PS00518 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR017907 GeneTree:ENSGT00440000033329
EMBL:CU928929 Ensembl:ENSSSCT00000036557 Uniprot:K7GS78
Length = 694
Score = 139 (54.0 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 60 SERENIDTTRTSEPHNTGCQKLEASNVNEAIRRGAVHSRIEEDLLQTESKSDVPQFMKLE 119
S+ E+ D E + C + +S + + H ++E + +K+ P
Sbjct: 323 SDMEDQDGVEEEEKADAACPQAASSKTGKCQEKKRKHCQVEPQDPEVPNKAAKPDPPADP 382
Query: 120 LVIKTNASAMENGNFP-SELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKC 178
T A ++ +F S+L+CSLC LF E V PC H+FC KC+ L A+CP C
Sbjct: 383 GA--TPALSVPLASFDASDLECSLCMRLFYEPVTTPC-GHTFCLKCLERCLDHNAKCPLC 439
Query: 179 FS--SKCRLE-DLLPNVSLRQAIEHFLESQI 206
S+C NV + + I FL ++
Sbjct: 440 KDGLSQCLASRKYSKNVIMEELIAKFLPEEL 470
>UNIPROTKB|K7GKX2 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 RefSeq:XP_003360480.1
Ensembl:ENSSSCT00000035094 GeneID:100517799 Uniprot:K7GKX2
Length = 711
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 60 SERENIDTTRTSEPHNTGCQKLEASNVNEAIRRGAVHSRIEEDLLQTESKSDVPQFMKLE 119
S+ E+ D E + C + +S + + H ++E + +K+ P
Sbjct: 340 SDMEDQDGVEEEEKADAACPQAASSKTGKCQEKKRKHCQVEPQDPEVPNKAAKPDPPADP 399
Query: 120 LVIKTNASAMENGNFP-SELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKC 178
T A ++ +F S+L+CSLC LF E V PC H+FC KC+ L A+CP C
Sbjct: 400 GA--TPALSVPLASFDASDLECSLCMRLFYEPVTTPC-GHTFCLKCLERCLDHNAKCPLC 456
Query: 179 FS--SKCRLE-DLLPNVSLRQAIEHFLESQI 206
S+C NV + + I FL ++
Sbjct: 457 KDGLSQCLASRKYSKNVIMEELIAKFLPEEL 487
>UNIPROTKB|K7GLC4 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 GeneID:100517799
RefSeq:XP_003135396.2 Ensembl:ENSSSCT00000033278 Uniprot:K7GLC4
Length = 752
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 60 SERENIDTTRTSEPHNTGCQKLEASNVNEAIRRGAVHSRIEEDLLQTESKSDVPQFMKLE 119
S+ E+ D E + C + +S + + H ++E + +K+ P
Sbjct: 381 SDMEDQDGVEEEEKADAACPQAASSKTGKCQEKKRKHCQVEPQDPEVPNKAAKPDPPADP 440
Query: 120 LVIKTNASAMENGNFP-SELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKC 178
T A ++ +F S+L+CSLC LF E V PC H+FC KC+ L A+CP C
Sbjct: 441 GA--TPALSVPLASFDASDLECSLCMRLFYEPVTTPC-GHTFCLKCLERCLDHNAKCPLC 497
Query: 179 FS--SKCRLE-DLLPNVSLRQAIEHFLESQI 206
S+C NV + + I FL ++
Sbjct: 498 KDGLSQCLASRKYSKNVIMEELIAKFLPEEL 528
>UNIPROTKB|F1RU80 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:CU928929
Ensembl:ENSSSCT00000013812 Uniprot:F1RU80
Length = 788
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 60 SERENIDTTRTSEPHNTGCQKLEASNVNEAIRRGAVHSRIEEDLLQTESKSDVPQFMKLE 119
S+ E+ D E + C + +S + + H ++E + +K+ P
Sbjct: 381 SDMEDQDGVEEEEKADAACPQAASSKTGKCQEKKRKHCQVEPQDPEVPNKAAKPDPPADP 440
Query: 120 LVIKTNASAMENGNFP-SELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKC 178
T A ++ +F S+L+CSLC LF E V PC H+FC KC+ L A+CP C
Sbjct: 441 GA--TPALSVPLASFDASDLECSLCMRLFYEPVTTPC-GHTFCLKCLERCLDHNAKCPLC 497
Query: 179 FS--SKCRLE-DLLPNVSLRQAIEHFLESQI 206
S+C NV + + I FL ++
Sbjct: 498 KDGLSQCLASRKYSKNVIMEELIAKFLPEEL 528
>POMBASE|SPBP8B7.15c [details] [associations]
symbol:SPBP8B7.15c "ubiquitin-protein ligase E3 RBBP6
family involved in mRNA cleavage (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=NAS] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 PomBase:SPBP8B7.15c
Prosite:PS00518 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006378 GO:GO:0003676 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 SUPFAM:SSF57756 GO:GO:0005847 GO:GO:0006379
eggNOG:COG5222 HOGENOM:HOG000162394 KO:K15541 OrthoDB:EOG4NGKWM
PIR:T40809 RefSeq:NP_596522.1 HSSP:Q9H3I8 ProteinModelPortal:O94264
SMR:O94264 STRING:O94264 EnsemblFungi:SPBP8B7.15c.1 GeneID:2541385
KEGG:spo:SPBP8B7.15c OMA:QKDPSRI NextBio:20802494 Uniprot:O94264
Length = 482
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 138 LKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKA-RCPKCFSSKCRLEDLLPNVSLRQ 196
L C+LC L + A PCC FCE+CI+ L++ CP C L+ L P+ ++
Sbjct: 280 LACTLCKKLARNACRTPCCDKLFCEECIQTALLDSDFECPNCHRKDVLLDTLNPDYQKQR 339
Query: 197 AIEHFLESQILISGSENA 214
IE ++S +L S S+N+
Sbjct: 340 EIEAVVKS-VLGSNSKNS 356
>UNIPROTKB|C9J0Q4 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0008270 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0045910 EMBL:AC068312
EMBL:AC008151 EMBL:AC034186 HGNC:HGNC:18278 HOGENOM:HOG000234845
IPI:IPI00879143 ProteinModelPortal:C9J0Q4 SMR:C9J0Q4 STRING:C9J0Q4
Ensembl:ENST00000413832 ArrayExpress:C9J0Q4 Bgee:C9J0Q4
Uniprot:C9J0Q4
Length = 92
Score = 111 (44.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 138 LKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKC 178
L+C +C F A++IP C H++C CIR L K +CP C
Sbjct: 23 LRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTC 63
>UNIPROTKB|F8WFA6 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC068312 EMBL:AC008151
EMBL:AC034186 HGNC:HGNC:18278 IPI:IPI00925824
ProteinModelPortal:F8WFA6 SMR:F8WFA6 Ensembl:ENST00000421052
ArrayExpress:F8WFA6 Bgee:F8WFA6 Uniprot:F8WFA6
Length = 126
Score = 111 (44.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 138 LKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKC 178
L+C +C F A++IP C H++C CIR L K +CP C
Sbjct: 23 LRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTC 63
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 111 (44.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 136 SELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSSKCRLEDLLPN 191
++ C +C + +EA M C HSFC KCI L + RCPKC ++ L PN
Sbjct: 37 NDFVCPICFDMIEEAYMTKC-GHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPN 91
>ZFIN|ZDB-GENE-040426-849 [details] [associations]
symbol:rnf8 "ring finger protein 8, E3 ubiquitin
protein ligase" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0000781
"chromosome, telomeric region" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0043486 "histone exchange" evidence=ISS]
[GO:0045190 "isotype switching" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISS] [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0007286 "spermatid development"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0045900 "negative regulation of translational
elongation" evidence=ISS] [GO:0070535 "histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=ISS] [GO:0033522
"histone H2A ubiquitination" evidence=ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 Prosite:PS00518 ZFIN:ZDB-GENE-040426-849
GO:GO:0005634 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349 EMBL:CU660013
Ensembl:ENSDART00000151429 Bgee:I3IRX0 Uniprot:I3IRX0
Length = 531
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 59/248 (23%), Positives = 105/248 (42%)
Query: 16 EVKPSQPKIEEINFDDFGVDLCPALNGNLSCSD------VDDVDKNICVGSERENIDTTR 69
E + +Q E D L AL G L ++ ++K+ C E ++T +
Sbjct: 261 EQQQTQTPEREKEMQDLQTQL-EALRGQLRSQQEQALRRMETLEKSFC--EEERRLETEK 317
Query: 70 TSEPHNTGCQKL--EASNVNEAIRRGAVHSRIE-EDLLQTESKS-DVPQFMKLELVI-KT 124
+ + G +K EA + + H+R +++LQ + K +V + K + K
Sbjct: 318 AQQ-NEVGLKKQLEEALKEHRKVIEELKHARQGFKEVLQAKDKELEVTKEEKEKAKAQKE 376
Query: 125 NASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSSKCR 184
SEL+CS+C+ LF EAV + C HSFC+ CI K +CP C+ +
Sbjct: 377 EVVTQMTEVLESELQCSICSELFIEAVTLNCA-HSFCQHCISEWRNRKDKCPMCWQN--- 432
Query: 185 LEDLLPNVSLRQAIEHFLESQILISGSENAYHRYAPDGESGIQAKDVSCAVTNLQREPEL 244
+ ++ L I+ +E+ +S + G++ + S AV + + +
Sbjct: 433 ITSQTRSLVLDNCIDRMVEN---LSADMRERRLVLINERKGLKVR-ASPAVVVINDDSDS 488
Query: 245 ADSPSATG 252
DS S+ G
Sbjct: 489 EDSSSSDG 496
>UNIPROTKB|E1BID7 [details] [associations]
symbol:TRIM69 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104222
OMA:IAAHKEN EMBL:DAAA02030051 IPI:IPI00717661
Ensembl:ENSBTAT00000009893 Uniprot:E1BID7
Length = 502
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/155 (25%), Positives = 76/155 (49%)
Query: 104 LQTESKSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEK 163
L +++ +D + ++ VI +S ++ + +EL C LCN F++A+M+ C H+FC+
Sbjct: 7 LSSKTDTDSDSYAEVNDVITQISSKVQIQDITTELHCPLCNDWFRDALMLSC-GHNFCQS 65
Query: 164 CIRLVLVEKAR---CPKCFSSKCRLEDLLPNVSLRQAIEHFLESQILISG-------SEN 213
CI+ ++A CP+C C+ + N+ L + +E ++ L+ G EN
Sbjct: 66 CIQNFWKQQANETFCPEC-KMLCQYSNCTFNLVLEKLVEK-IKKLPLLKGHPRCPEHGEN 123
Query: 214 AYHRYAPDGES-GIQAKDVSCAVTNLQREPELADS 247
PDG Q KD +V + +++D+
Sbjct: 124 LKLFSKPDGRLICFQCKDARLSVGQSKEFLQISDA 158
>UNIPROTKB|F1NNQ7 [details] [associations]
symbol:Gga.54568 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:VKLSALM GeneTree:ENSGT00440000033329 EMBL:AADN02013631
EMBL:AADN02013632 EMBL:AADN02013633 IPI:IPI00592342
Ensembl:ENSGALT00000014392 Uniprot:F1NNQ7
Length = 632
Score = 133 (51.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 46/162 (28%), Positives = 77/162 (47%)
Query: 59 GSERENIDTTRT----SEPHNTGCQKLEASN-VNEAIRRGAVHSRIEEDLLQTESKSDVP 113
G+ R+++ TT + SE N E++ V+E +RG + + L+ ++VP
Sbjct: 252 GNLRKSMQTTESRKDCSEEENKPTSVPESTFLVSE--KRGLLKRK---GCLEEARDAEVP 306
Query: 114 -QFMKLELVIKTNASAMENGNF----PSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLV 168
+ +K + V +S ++ F PS+L CSLC LF E V PC H+FC KC+
Sbjct: 307 CKLLKKDTVDTKGSSTGQHTPFESVDPSDLDCSLCMRLFYEPVTTPC-GHTFCLKCLERC 365
Query: 169 LVEKARCPKC---FSSKC-RLEDLLPNVSLRQAIEHFLESQI 206
L +CP C S +C + V + + I +L ++
Sbjct: 366 LDHNPKCPLCKEGLSEQCLAMRKYCKTVLMEELIAKYLPEEL 407
>ZFIN|ZDB-GENE-081031-50 [details] [associations]
symbol:btr19 "bloodthirsty-related gene family,
member 19" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081031-50
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00670000097622
EMBL:CT030005 Ensembl:ENSDART00000146448 Uniprot:I3IRW2
Length = 192
Score = 119 (46.9 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 137 ELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVL--VEKARCPKCFSSKCRLEDLLPNVSL 194
+L+CS+C +F + V PC H+FC+ C+ + CP C + + DL N +L
Sbjct: 13 DLQCSICLEVFTDPVSTPC-GHNFCKSCLNTCWNKTQTCSCPNCKETFTQRPDLKINTTL 71
Query: 195 RQAIEHFLESQ 205
R+ EH+ E +
Sbjct: 72 REISEHYKEER 82
>MGI|MGI:1890476 [details] [associations]
symbol:Rad18 "RAD18 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000785 "chromatin" evidence=IDA] [GO:0001741 "XY body"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005657 "replication fork" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009411 "response
to UV" evidence=IMP] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0045910
"negative regulation of DNA recombination" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
UniPathway:UPA00143 MGI:MGI:1890476 Prosite:PS00518 GO:GO:0005634
GO:GO:0009411 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 GO:GO:0016567 Gene3D:1.10.720.30 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031593 InterPro:IPR017907 GO:GO:0001741
GO:GO:0045910 eggNOG:COG5432 KO:K10627 CTD:56852
HOGENOM:HOG000234845 HOVERGEN:HBG054721 EMBL:AF205278 EMBL:AK012795
IPI:IPI00470179 RefSeq:NP_067360.2 UniGene:Mm.103812
ProteinModelPortal:Q9QXK2 SMR:Q9QXK2 STRING:Q9QXK2
PhosphoSite:Q9QXK2 PRIDE:Q9QXK2 Ensembl:ENSMUST00000077088
GeneID:58186 KEGG:mmu:58186 UCSC:uc009dec.2
GeneTree:ENSGT00390000011230 NextBio:314151 Bgee:Q9QXK2
CleanEx:MM_RAD18 Genevestigator:Q9QXK2
GermOnline:ENSMUSG00000030254 Uniprot:Q9QXK2
Length = 509
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 47/165 (28%), Positives = 71/165 (43%)
Query: 138 LKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSSKCRLEDLLPNVSLRQA 197
L+C +C F AV+IP C H++C CIR L K +CP C + DL N L +
Sbjct: 23 LRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKTQCPTCCVAVTE-PDLRNNRLLDEL 81
Query: 198 IE--HFLESQILISGSENAYHRYAPDGESGIQAKDVSCAVTNLQREPELADSPSATGRGS 255
++ +F + +L E+ P +K V V N AD+ + +
Sbjct: 82 VKSMNFARTHLLQFALESP-----PISPVSSTSKKVVVKVHN-------ADAAQHPVKQA 129
Query: 256 NQIVADCDSVIRNNTGSCVNHL-GADNSLKSCTLPYKVKQIDAEV 299
N+++ D + TG CV L G +N K P K AE+
Sbjct: 130 NRLM---DKFLIRETGDCVFELLGKENERKFS--PQKELSTSAEI 169
>MGI|MGI:1921615 [details] [associations]
symbol:Lonrf3 "LON peptidase N-terminal domain and ring
finger 3" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 MGI:MGI:1921615 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802
HOGENOM:HOG000060199 HOVERGEN:HBG081924 CTD:79836 EMBL:AK016522
EMBL:AL450395 EMBL:BC120688 EMBL:BC120690 IPI:IPI00137246
RefSeq:NP_083170.1 UniGene:Mm.327654 HSSP:Q13049
ProteinModelPortal:Q9D4H7 SMR:Q9D4H7 PhosphoSite:Q9D4H7
PRIDE:Q9D4H7 Ensembl:ENSMUST00000016383 GeneID:74365 KEGG:mmu:74365
UCSC:uc009sxm.1 GeneTree:ENSGT00440000033329 InParanoid:Q9D4H7
OrthoDB:EOG4RXXZM NextBio:340559 Bgee:Q9D4H7 CleanEx:MM_LONRF3
Genevestigator:Q9D4H7 Uniprot:Q9D4H7
Length = 753
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 49/159 (30%), Positives = 66/159 (41%)
Query: 55 NICVGSERENIDTTRTSEPHNTGCQKLEASNVNEAIR-RGAVHSRIEEDLLQTESKSDVP 113
N G D + E + + E R R + ++ + +L SK D P
Sbjct: 379 NSAQGKVSSKEDRKKDQEGEDRDAASVRTGKCQEKKRNRCQIETQEDTELPNKVSKQDFP 438
Query: 114 QFMKLELVIKTNASAMENGNFP-SELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEK 172
E K + S G+F S+L+CSLC LF E V PC H+FC KC+ L
Sbjct: 439 A----EQGAKPDLSN-PLGSFDASDLECSLCMRLFYEPVTTPC-GHTFCLKCLERCLDHN 492
Query: 173 ARCPKCFSSKCRLEDLLP------NVSLRQAIEHFLESQ 205
A+CP C K L LP NV L + I FL +
Sbjct: 493 AKCPLC---KDVLLQCLPSRKYSKNVILEELIATFLPEE 528
>FB|FBgn0040294 [details] [associations]
symbol:POSH "Plenty of SH3s" species:7227 "Drosophila
melanogaster" [GO:0008340 "determination of adult lifespan"
evidence=NAS;IMP] [GO:0008104 "protein localization" evidence=IMP]
[GO:0045451 "pole plasm oskar mRNA localization" evidence=IMP]
[GO:0008103 "oocyte microtubule cytoskeleton polarization"
evidence=IMP] [GO:0042052 "rhabdomere development" evidence=IMP]
[GO:0030159 "receptor signaling complex scaffold activity"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0060548 "negative regulation of cell death" evidence=IMP]
Pfam:PF00018 InterPro:IPR001841 InterPro:IPR001452 PRINTS:PR00452
PROSITE:PS50002 PROSITE:PS50089 SMART:SM00184 SMART:SM00326
Prosite:PS00518 EMBL:AE013599 GO:GO:0008340 GO:GO:0046872
GO:GO:0008270 InterPro:IPR000108 PRINTS:PR00499 SUPFAM:SSF50044
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0060548 GO:GO:0004842
GO:GO:0030159 InterPro:IPR017907 HSSP:P29355
GeneTree:ENSGT00690000101886 eggNOG:NOG314495 KO:K12171
EMBL:AY051984 RefSeq:NP_523776.1 UniGene:Dm.3323 SMR:Q7K4D1
STRING:Q7K4D1 EnsemblMetazoa:FBtr0086828 GeneID:36990
KEGG:dme:Dmel_CG4909 UCSC:CG4909-RA CTD:36990 FlyBase:FBgn0040294
InParanoid:Q7K4D1 OMA:ESANSHG OrthoDB:EOG41NS26 GenomeRNAi:36990
NextBio:801383 Uniprot:Q7K4D1
Length = 838
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 138 LKCSLC-NTLFKEAVMIPCCQHSFCEKCIRLVLVE--KARCPKC-FSSKCRLEDLLPNVS 193
L+CS+C L + ++PC QH+FC KC++ ++ K RCP+C C++++L PNV
Sbjct: 10 LECSVCLERLDTTSKVLPC-QHTFCRKCLQDIVASQHKLRCPECRILVSCKIDELPPNVL 68
Query: 194 LRQAIEHFLESQILISGSE 212
L + +E ++ G E
Sbjct: 69 LMRILEGMKQNAAAGKGEE 87
>UNIPROTKB|H9KYY7 [details] [associations]
symbol:H9KYY7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02066798
Ensembl:ENSGALT00000001598 OMA:CLEKPQP Uniprot:H9KYY7
Length = 205
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 137 ELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKA------RCPKCFSSKCRLEDLLP 190
EL CS+C +++ V + C HSFCE+CI+ VL + CP C + + L P
Sbjct: 13 ELTCSVCLDIYRNPVSLGC-GHSFCEECIQGVLRSQHCPQGLFSCPLCSALEAPPTKLQP 71
Query: 191 NVSLRQAIEHFLES 204
N+ LR ++ FL++
Sbjct: 72 NIQLRSIVQKFLDT 85
>UNIPROTKB|B3KUN7 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:CH471161 HOGENOM:HOG000060199 HOVERGEN:HBG081924 EMBL:AL772284
UniGene:Hs.144266 HGNC:HGNC:21152 EMBL:AK097641 IPI:IPI00902452
SMR:B3KUN7 Ensembl:ENST00000422289 UCSC:uc004eqz.3 Uniprot:B3KUN7
Length = 503
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 59 GSERENIDTTRTSEPHNTGCQKLEASNVNEAIRRGAVHSRIEED----LLQTESKSDVPQ 114
G + D E + K +S + + H +IE + SK D P
Sbjct: 130 GQQHHMKDQEEEEEKWDATSPKAASSKTGKCQEKKRKHCQIESQEETGMPNKASKQDPPT 189
Query: 115 FMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKAR 174
+ + ++ + S+L+C+LC LF E V PC H+FC KC+ L A+
Sbjct: 190 DQGDKPALSLPLASFD----ASDLECALCMRLFYEPVTTPC-GHTFCLKCLERCLDHNAK 244
Query: 175 CPKCFS--SKCRLE-DLLPNVSLRQAIEHFLESQI 206
CP C S+C NV + + I FL ++
Sbjct: 245 CPLCKDGLSQCLASRKYSKNVIMEELIAKFLPEEL 279
>UNIPROTKB|H0Y7Q8 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 EMBL:AL772284 HGNC:HGNC:21152
ProteinModelPortal:H0Y7Q8 Ensembl:ENST00000439603 Uniprot:H0Y7Q8
Length = 525
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 59 GSERENIDTTRTSEPHNTGCQKLEASNVNEAIRRGAVHSRIEED----LLQTESKSDVPQ 114
G + D E + K +S + + H +IE + SK D P
Sbjct: 152 GQQHHMKDQEEEEEKWDATSPKAASSKTGKCQEKKRKHCQIESQEETGMPNKASKQDPPT 211
Query: 115 FMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKAR 174
+ + ++ + S+L+C+LC LF E V PC H+FC KC+ L A+
Sbjct: 212 DQGDKPALSLPLASFD----ASDLECALCMRLFYEPVTTPC-GHTFCLKCLERCLDHNAK 266
Query: 175 CPKCFS--SKCRLE-DLLPNVSLRQAIEHFLESQI 206
CP C S+C NV + + I FL ++
Sbjct: 267 CPLCKDGLSQCLASRKYSKNVIMEELIAKFLPEEL 301
>ZFIN|ZDB-GENE-070705-376 [details] [associations]
symbol:btr24 "bloodthirsty-related gene family,
member 24" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-376 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CU861574 IPI:IPI00831988
PRIDE:F1R4R5 Ensembl:ENSDART00000148180 Uniprot:F1R4R5
Length = 527
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 129 MENGNFP--SELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVL--VEKARCPKCFSSKCR 184
M + +FP EL+CS+C +F + V PC H+FC+ C+ + CP C + +
Sbjct: 1 MSSTSFPLSEELQCSICLDVFTDPVSTPC-GHNFCKSCLNTCWNNSQTCSCPYCNETFTQ 59
Query: 185 LEDLLPNVSLRQAIEHFLE 203
DL N +LR+ EH+ E
Sbjct: 60 RPDLKINTTLREISEHYKE 78
>UNIPROTKB|G3X6C1 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 CTD:79836 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:DAAA02067124
RefSeq:NP_001178063.1 UniGene:Bt.92361 ProteinModelPortal:G3X6C1
Ensembl:ENSBTAT00000003384 GeneID:508189 KEGG:bta:508189
NextBio:20868400 Uniprot:G3X6C1
Length = 759
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 29/74 (39%), Positives = 39/74 (52%)
Query: 136 SELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFS--SKCRLE-DLLPNV 192
S+L+CSLC LF E V PC H+FC KC+ L A+CP C S+C NV
Sbjct: 463 SDLECSLCMRLFYEPVTTPC-GHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNV 521
Query: 193 SLRQAIEHFLESQI 206
+ + I FL ++
Sbjct: 522 IMEELIAKFLPEEL 535
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 100 (40.3 bits), Expect = 0.00029, P = 0.00029
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 131 NGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSS-KCRLEDLL 189
N +EL+C++C+ F EAV + C HSFC CI K CP C K + L+
Sbjct: 2 NDVLENELQCTICSEHFIEAVTLNCA-HSFCSYCIDEWTKRKVECPICRQEIKSKTRSLV 60
Query: 190 PNVSLRQAIEH 200
+ + + +E+
Sbjct: 61 LDNCIDRMVEN 71
>ZFIN|ZDB-GENE-060421-3419 [details] [associations]
symbol:btr20 "bloodthirsty-related gene family,
member 20" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060421-3419 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862 UniGene:Dr.23709
EMBL:BC065891 IPI:IPI00758608 ProteinModelPortal:Q6P000
InParanoid:Q6P000 Uniprot:Q6P000
Length = 564
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 131 NGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVL--VEKARCPKCFSSKCRLEDL 188
+G EL+CS+C +F + V PC H+FC+ C+ + CP C + + DL
Sbjct: 49 SGPLSEELRCSICLEVFTDPVSTPC-GHNFCKSCLNKYWNNSQTCSCPNCKETFTQRPDL 107
Query: 189 LPNVSLRQAIEHFLESQ 205
N +LR+ EH+ E +
Sbjct: 108 KINTTLREISEHYKEKR 124
>UNIPROTKB|F1SN25 [details] [associations]
symbol:TRIM69 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104222
OMA:IAAHKEN EMBL:CU480607 Ensembl:ENSSSCT00000005168 Uniprot:F1SN25
Length = 500
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 110 SDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVL 169
+D ++++ +I S ++ + EL C LCN F++ +M+ C H+FC+ CI
Sbjct: 11 TDSDNYIEVNDLITQIPSKVQIQDITMELHCPLCNDWFRDPLMLTC-GHNFCQSCIENFW 69
Query: 170 VEKAR---CPKCFSSKCRLEDLLPNVSLRQAIEHFLESQILISG-------SENAYHRYA 219
++A+ CP+C C+ + N+ L + IE ++ L+ G EN
Sbjct: 70 KQEAKETFCPEC-KMLCQYSNCTFNLVLEKLIEK-IKKLPLLKGHPQCQEHGENLKLFSK 127
Query: 220 PDGES-GIQAKDVSCAVTNLQREPELADS 247
PDG+ Q KD +V + ++AD+
Sbjct: 128 PDGKLICFQCKDARLSVGQSKEFLQIADA 156
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 126 (49.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 52/225 (23%), Positives = 100/225 (44%)
Query: 15 NEVKPSQPKIEEINFDDFGVDLCPALNGNLSCSDVDDVDKNICVGSERENIDTTRTSEPH 74
N P P N ++ ++ P ++ S S + + NI + EN++ + ++
Sbjct: 42 NNNNPDNPNNNNNNSNE-SIEP-PRISITTSSSSLLLYNTNIDMNENLENLNGSNSNS-- 97
Query: 75 NTGCQKLEASNVNEAIRRGAVHSRIEEDLLQTESKSDVPQFMKLELVIKTNASAMENGNF 134
N+ ++N N +S I + + + P+ K++ ++N+ A E +
Sbjct: 98 NSNGNNNNSNNPNNPNNN---NSSINNSNNKVSTLN--PKTYKIKKDSESNSDATEEVD- 151
Query: 135 PSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSSKCRLEDLLPNVSL 194
L C +CN + KE I C HSFC +CI + L + CP C R E + PN +L
Sbjct: 152 -ELLLCPVCNDMIKEP-FISKCGHSFCYQCIIIHLSKSKTCPICMVYLTR-EQIFPNFAL 208
Query: 195 RQAIEHF-LESQILISGSENAYHRYAPDGESGIQAKDVSCAVTNL 238
+ +E ++S +L + + + R E+ + D++ V+ L
Sbjct: 209 NKFVEKIGVKSSLLPTPTVKQF-RNTLSNEN-LSLHDINLMVSTL 251
Score = 49 (22.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 247 SPSATGRGSNQIV-ADCDSVIRNNTGSCVNHLGADNSLKS 285
SP++ S+ I+ ++ +S NNT S +N+L +N+++S
Sbjct: 592 SPNSVNSSSSSIINSNSNSNNNNNTNSNLNNL--NNNIES 629
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 99 (39.9 bits), Expect = 0.00038, P = 0.00038
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 133 NFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKA------------RCPKCFS 180
NF EL C +C ++F++ ++PC H+FC C+ +L +CP C S
Sbjct: 3 NFEEELTCPICYSIFEDPRVLPC-SHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRS 61
Query: 181 ----SKCRLEDLLPNVSLRQAIEHF 201
+ +E L N +LR IE +
Sbjct: 62 ITEIAPTGIESLPVNFALRAIIEKY 86
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 99 (39.9 bits), Expect = 0.00038, P = 0.00038
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 133 NFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKA------------RCPKCFS 180
NF EL C +C ++F++ ++PC H+FC C+ +L +CP C S
Sbjct: 3 NFEEELTCPICYSIFEDPRVLPC-SHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRS 61
Query: 181 ----SKCRLEDLLPNVSLRQAIEHF 201
+ +E L N +LR IE +
Sbjct: 62 ITEIAPTGIESLPVNFALRAIIEKY 86
>UNIPROTKB|E1BSU9 [details] [associations]
symbol:LOC416147 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00590049 Ensembl:ENSGALT00000001837 OMA:PIEERRC
Uniprot:E1BSU9
Length = 274
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 123 KTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSSK 182
K + + EL CS+C +L+K V + CC HSFC++C++ VL + + +S
Sbjct: 3 KAKEEVRASSSLEDELTCSICLSLYKNPVSL-CCGHSFCKQCVQKVLSNQQQAKASYSCP 61
Query: 183 -CRLEDLLPNVSLR 195
CR+ DL P + L+
Sbjct: 62 LCRV-DLGPILELQ 74
>UNIPROTKB|Q2HJ46 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9913
"Bos taurus" [GO:0045190 "isotype switching" evidence=ISS]
[GO:0033522 "histone H2A ubiquitination" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0043486 "histone
exchange" evidence=ISS] [GO:0007286 "spermatid development"
evidence=ISS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0006974 "response to
DNA damage stimulus" evidence=ISS] [GO:0000781 "chromosome,
telomeric region" evidence=ISS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0045739 "positive regulation of DNA repair" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0030496 "midbody" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 HSSP:P25916 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HOVERGEN:HBG023954
KO:K10667 EMBL:BC113317 IPI:IPI00721755 RefSeq:NP_001039681.1
UniGene:Bt.41339 ProteinModelPortal:Q2HJ46 SMR:Q2HJ46 STRING:Q2HJ46
PRIDE:Q2HJ46 Ensembl:ENSBTAT00000010959 GeneID:515933
KEGG:bta:515933 CTD:9025 eggNOG:NOG242257
GeneTree:ENSGT00400000022349 HOGENOM:HOG000154169 InParanoid:Q2HJ46
OMA:EVTEEDW OrthoDB:EOG4TF0KP NextBio:20872060
PANTHER:PTHR15067:SF3 Uniprot:Q2HJ46
Length = 487
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 32/108 (29%), Positives = 56/108 (51%)
Query: 100 EEDLLQTESKSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHS 159
+++L QT+ + + Q K E++ N +EN EL+C +C+ F EAV + C HS
Sbjct: 371 DKELEQTKEEKEKVQAQKEEVLSHMN-DVLEN-----ELQCIICSEYFVEAVTLNCA-HS 423
Query: 160 FCEKCIRLVLVEKARCPKCFSS-KCRLEDLLPNVSLRQAIEHFLESQI 206
FC CI + K CP C K + L+ + + + +++ L S++
Sbjct: 424 FCSYCINEWMKRKVECPICRKDIKSKTRSLVLDNCISKMVDN-LNSEV 470
>UNIPROTKB|Q496Y0 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
HSSP:Q8IZP6 GO:GO:0004176 eggNOG:COG2802 HOGENOM:HOG000060199
HOVERGEN:HBG081924 EMBL:AK026265 EMBL:AK091777 EMBL:AL772284
EMBL:BC099847 EMBL:BC100671 EMBL:BC103491 IPI:IPI00300753
IPI:IPI00640460 IPI:IPI00827481 RefSeq:NP_001027026.1
RefSeq:NP_079054.3 UniGene:Hs.144266 ProteinModelPortal:Q496Y0
SMR:Q496Y0 IntAct:Q496Y0 PhosphoSite:Q496Y0 DMDM:121949074
PRIDE:Q496Y0 Ensembl:ENST00000304778 Ensembl:ENST00000365713
Ensembl:ENST00000371628 Ensembl:ENST00000481285 GeneID:79836
KEGG:hsa:79836 UCSC:uc004eqw.3 UCSC:uc004eqx.3 CTD:79836
GeneCards:GC0XP118108 HGNC:HGNC:21152 neXtProt:NX_Q496Y0
PharmGKB:PA134900980 InParanoid:Q496Y0 OMA:VKLSALM PhylomeDB:Q496Y0
GenomeRNAi:79836 NextBio:69492 ArrayExpress:Q496Y0 Bgee:Q496Y0
CleanEx:HS_LONRF3 Genevestigator:Q496Y0 Uniprot:Q496Y0
Length = 759
Score = 124 (48.7 bits), Expect = 0.00046, P = 0.00046
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 59 GSERENIDTTRTSEPHNTGCQKLEASNVNEAIRRGAVHSRIEED----LLQTESKSDVPQ 114
G + D E + K +S + + H +IE + SK D P
Sbjct: 386 GQQHHMKDQEEEEEKWDATSPKAASSKTGKCQEKKRKHCQIESQEETGMPNKASKQDPPT 445
Query: 115 FMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKAR 174
+ + ++ + S+L+C+LC LF E V PC H+FC KC+ L A+
Sbjct: 446 DQGDKPALSLPLASFD----ASDLECALCMRLFYEPVTTPC-GHTFCLKCLERCLDHNAK 500
Query: 175 CPKCFS--SKCRLE-DLLPNVSLRQAIEHFLESQI 206
CP C S+C NV + + I FL ++
Sbjct: 501 CPLCKDGLSQCLASRKYSKNVIMEELIAKFLPEEL 535
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 98 (39.6 bits), Expect = 0.00048, P = 0.00048
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 140 CSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEK-ARCPKCFSSKCRLEDLLPNVSL 194
C +C + K V CQH FC KC + E A CP C + R E P +L
Sbjct: 18 CPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRERACPERAL 73
>ZFIN|ZDB-GENE-081031-80 [details] [associations]
symbol:btr21 "bloodthirsty-related gene family,
member 21" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081031-80 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 GeneTree:ENSGT00660000095328 EMBL:CT030005
IPI:IPI00608496 Ensembl:ENSDART00000131989 Uniprot:F6P534
Length = 563
Score = 122 (48.0 bits), Expect = 0.00051, P = 0.00051
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 128 AMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKAR--CPKCFSSKCRL 185
+M G +L+CS+C +F + V PC H+FC C+ + CP C + +
Sbjct: 24 SMAKGPLSEDLQCSVCLDVFTDPVSTPC-GHNFCRSCLNKCWNKSWNYSCPNCKETFTQR 82
Query: 186 EDLLPNVSLRQAIEHFLESQ 205
DL N SLR+ EH+ E +
Sbjct: 83 PDLKINTSLREISEHYKEKR 102
>UNIPROTKB|E2RKD8 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045900 "negative regulation of translational
elongation" evidence=IEA] [GO:0045739 "positive regulation of DNA
repair" evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 Prosite:PS00518 GO:GO:0005634 GO:GO:0051301
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0016881 GO:GO:0045739 GO:GO:0000151
InterPro:IPR017907 GO:GO:0033523 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 EMBL:AAEX03008298 Ensembl:ENSCAFT00000002283
Uniprot:E2RKD8
Length = 487
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 101 EDLLQTESKSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSF 160
++L QT+ + + Q K E++ N +EN EL+C +C+ F EAV + C HSF
Sbjct: 372 KELEQTKEEKEKMQAQKEEVLSHVN-DVLEN-----ELQCIICSEYFIEAVTLNCA-HSF 424
Query: 161 CEKCIRLVLVEKARCPKCFSS-KCRLEDLLPNVSLRQAIEHFLESQI 206
C CI + K CP C K + L+ + + + +++ L S++
Sbjct: 425 CSYCINEWMKRKVECPICRKDIKSKTHSLVLDNCINKMVDN-LSSEV 470
>UNIPROTKB|J9P6M8 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 KO:K10667 CTD:9025 GeneTree:ENSGT00400000022349
OMA:EVTEEDW PANTHER:PTHR15067:SF3 EMBL:AAEX03008298
RefSeq:XP_864730.1 ProteinModelPortal:J9P6M8
Ensembl:ENSCAFT00000047572 GeneID:481775 KEGG:cfa:481775
Uniprot:J9P6M8
Length = 487
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 101 EDLLQTESKSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSF 160
++L QT+ + + Q K E++ N +EN EL+C +C+ F EAV + C HSF
Sbjct: 372 KELEQTKEEKEKMQAQKEEVLSHVN-DVLEN-----ELQCIICSEYFIEAVTLNCA-HSF 424
Query: 161 CEKCIRLVLVEKARCPKCFSS-KCRLEDLLPNVSLRQAIEHFLESQI 206
C CI + K CP C K + L+ + + + +++ L S++
Sbjct: 425 CSYCINEWMKRKVECPICRKDIKSKTHSLVLDNCINKMVDN-LSSEV 470
>UNIPROTKB|E1BSV9 [details] [associations]
symbol:LOC416146 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00580824 Ensembl:ENSGALT00000001825 OMA:QINTEEL
Uniprot:E1BSV9
Length = 314
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 137 ELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKA------RCPKCFSSKCRLEDLLP 190
EL CS+C +++ V + C HSFCE+CI+ VL + CP C + + L P
Sbjct: 13 ELTCSVCLDIYRNPVSLGC-GHSFCEECIQGVLRSQHCPQGLFSCPLCSALEAPPTKLQP 71
Query: 191 NVSLRQAIEHFLES 204
N+ LR ++ FL++
Sbjct: 72 NIQLRSIVQKFLDT 85
>UNIPROTKB|F1NVL6 [details] [associations]
symbol:RAD18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000403 "Y-form DNA binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045910
"negative regulation of DNA recombination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003034 InterPro:IPR006642
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00184
SMART:SM00513 SMART:SM00734 Prosite:PS00518 GO:GO:0005634
GO:GO:0009411 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657 GO:GO:0000403
GO:GO:0045910 GeneTree:ENSGT00390000011230 EMBL:AADN02014513
EMBL:AADN02014514 EMBL:AADN02014515 EMBL:AADN02014516
IPI:IPI00589734 Ensembl:ENSGALT00000013623 OMA:TKCSHNF
Uniprot:F1NVL6
Length = 501
Score = 121 (47.7 bits), Expect = 0.00055, P = 0.00055
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 138 LKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSSKCRLEDLLPNVSLRQA 197
L+C +C F AV+IP C H++C CIR L K +CP C + DL N +L +
Sbjct: 24 LRCGICFDYFSIAVIIPQCSHNYCSLCIRKFLSYKTQCPTCCVAVSE-SDLKNNRTLDEL 82
Query: 198 IEHF 201
++ F
Sbjct: 83 VKSF 86
>UNIPROTKB|F1PSB6 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:VKLSALM GeneTree:ENSGT00440000033329 EMBL:AAEX03026821
Ensembl:ENSCAFT00000029170 Uniprot:F1PSB6
Length = 765
Score = 123 (48.4 bits), Expect = 0.00060, P = 0.00060
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 136 SELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFS--SKCRLE-DLLPNV 192
S+L+C+LC LF E V PC H+FC KC+ L A+CP C S+C NV
Sbjct: 469 SDLECALCMRLFYEPVTTPC-GHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNV 527
Query: 193 SLRQAIEHFLESQI 206
+ + I FL ++
Sbjct: 528 IMEELIAKFLPEEL 541
>UNIPROTKB|C9JNB9 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC024221 HGNC:HGNC:30834
IPI:IPI00946347 ProteinModelPortal:C9JNB9 SMR:C9JNB9 STRING:C9JNB9
Ensembl:ENST00000468542 ArrayExpress:C9JNB9 Bgee:C9JNB9
Uniprot:C9JNB9
Length = 68
Score = 97 (39.2 bits), Expect = 0.00061, P = 0.00061
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 128 AMENGNFPSELKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVL 169
++E NF EL C +C ++F++ ++PC H+FC C+ +L
Sbjct: 5 SLEMHNFEEELTCPICYSIFEDPRVLPC-SHTFCRNCLENIL 45
>UNIPROTKB|F1RVS2 [details] [associations]
symbol:LOC100153408 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 EMBL:CU467025 ProteinModelPortal:F1RVS2
Ensembl:ENSSSCT00000001757 ArrayExpress:F1RVS2 Uniprot:F1RVS2
Length = 487
Score = 120 (47.3 bits), Expect = 0.00068, P = 0.00068
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 101 EDLLQTESKSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSF 160
++L QT+ + + Q K E++ N +EN EL+C +C+ F EAV + C HSF
Sbjct: 372 KELEQTKEEKEKVQAQKEEVLSHMN-DVLEN-----ELQCIICSEYFIEAVTLNCA-HSF 424
Query: 161 CEKCIRLVLVEKARCPKCFSS-KCRLEDLLPNVSLRQAIEHFLESQI 206
C CI + K CP C K + L+ + + + +++ L S++
Sbjct: 425 CSYCINEWMKRKVECPICRKDIKSKTHSLVLDNCINKMVDN-LSSEV 470
>UNIPROTKB|I3L6W2 [details] [associations]
symbol:LOC100153408 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349 OMA:EVTEEDW
PANTHER:PTHR15067:SF3 EMBL:CU467025 Ensembl:ENSSSCT00000028776
Uniprot:I3L6W2
Length = 488
Score = 120 (47.3 bits), Expect = 0.00069, P = 0.00069
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 101 EDLLQTESKSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHSF 160
++L QT+ + + Q K E++ N +EN EL+C +C+ F EAV + C HSF
Sbjct: 372 KELEQTKEEKEKVQAQKEEVLSHMN-DVLEN-----ELQCIICSEYFIEAVTLNCA-HSF 424
Query: 161 CEKCIRLVLVEKARCPKCFSS-KCRLEDLLPNVSLRQAIEHFLESQI 206
C CI + K CP C K + L+ + + + +++ L S++
Sbjct: 425 CSYCINEWMKRKVECPICRKDIKSKTHSLVLDNCINKMVDN-LSSEV 470
>UNIPROTKB|Q58DB5 [details] [associations]
symbol:RAD18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 Gene3D:1.10.720.30 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOVERGEN:HBG054721
GeneTree:ENSGT00390000011230 EMBL:DAAA02053765 EMBL:DAAA02053766
EMBL:DAAA02053767 EMBL:DAAA02053768 EMBL:DAAA02053769
EMBL:DAAA02053770 IPI:IPI00702052 UniGene:Bt.26308 EMBL:BT021682
STRING:Q58DB5 Ensembl:ENSBTAT00000066111 InParanoid:Q58DB5
Uniprot:Q58DB5
Length = 336
Score = 117 (46.2 bits), Expect = 0.00078, P = 0.00078
Identities = 39/157 (24%), Positives = 71/157 (45%)
Query: 138 LKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSSKCRLEDLLPNVSLRQA 197
L+C +C F A+MIP C H++C CIR L K +CP C + DL N L +
Sbjct: 23 LRCGICFEYFNIAMMIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE-PDLKNNRVLDEL 81
Query: 198 IEH--FLESQILISGSENAYHRYAPDGESGIQAK-DVSCAVTN-LQREPELADS---PSA 250
+++ F + +L E+ A + K D + A + L++ +L ++ +
Sbjct: 82 VKNLNFARNHLLQFALESPPISAASSSSKNLATKADTAVAFRHSLKQGSKLMENFLIRES 141
Query: 251 TGRGSNQIVADCDSVI--RNNTGSCVNHLGADNSLKS 285
G S ++ + +S + + S G +++KS
Sbjct: 142 GGSASELLIKENESKLSPQKKLSSPAKTRGTPSAVKS 178
>UNIPROTKB|F1NWA3 [details] [associations]
symbol:F1NWA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:AADN02028660 IPI:IPI00587294 Ensembl:ENSGALT00000006484
OMA:ILEAEGM Uniprot:F1NWA3
Length = 579
Score = 120 (47.3 bits), Expect = 0.00088, P = 0.00088
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 100 EEDLLQTESKSDVPQFMKLELVIKTNASAMENGNFPSELKCSLCNTLFKEAVMIPCCQHS 159
EE++L + S SD P + E N +E S+L+CSLC +F E V PC H+
Sbjct: 250 EEEMLPS-SASDPPANEE-ETAAMDNLLPLEELLSISDLECSLCIRMFFEPVTTPC-GHT 306
Query: 160 FCEKCIRLVLVEKARCPKCFSS 181
FC++C+ L + CP C S
Sbjct: 307 FCKECLERCLDHRPNCPLCKQS 328
>UNIPROTKB|I3LT33 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CU638828
Ensembl:ENSSSCT00000027883 Uniprot:I3LT33
Length = 717
Score = 121 (47.7 bits), Expect = 0.00091, P = 0.00091
Identities = 42/148 (28%), Positives = 65/148 (43%)
Query: 70 TSEPHNTGCQKLEASN-VNEA---IRRGAVHSRIEEDLLQTESKSDVPQFMKLELVIKTN 125
TSEP + +++ +N +R + E LL + K + +K+E +
Sbjct: 346 TSEPVKGSLNRAQSAQAINSTDMPVREDCLKRVSSEPLLSVQEKGVL---LKIETPSEVC 402
Query: 126 ASAMENGNFPSEL------KCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCF 179
++ G+ P EL +CSLC LF E V PC HSFC+ C+ L CP C
Sbjct: 403 TFSLTCGDIPEELIDASDFECSLCMRLFFEPVTTPC-GHSFCKNCLERCLDHTPYCPLCK 461
Query: 180 SSKCRLEDLLPNVSLRQAIEHFLESQIL 207
S L++ L + R + LE I+
Sbjct: 462 ES---LKEYLAD--RRYCVTQLLEDLIV 484
>RGD|1306993 [details] [associations]
symbol:Rad18 "RAD18 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0001741 "XY body"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009411 "response
to UV" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0045910 "negative regulation of DNA
recombination" evidence=ISO] InterPro:IPR001841 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 RGD:1306993
Prosite:PS00518 GO:GO:0005634 GO:GO:0009411 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657 GO:GO:0000403
GO:GO:0045910 IPI:IPI00951538 Ensembl:ENSRNOT00000008214
UCSC:RGD:1306993 ArrayExpress:F1LYK9 Uniprot:F1LYK9
Length = 528
Score = 127 (49.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 44/150 (29%), Positives = 66/150 (44%)
Query: 138 LKCSLCNTLFKEAVMIPCCQHSFCEKCIRLVLVEKARCPKCFSSKCRLEDLLPNVSLRQA 197
L+C +C F AV+IP C H++C CIR L K +CP C + DL N L +
Sbjct: 21 LRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKTQCPTCCVAVTE-PDLRNNRLLDEL 79
Query: 198 IEH--FLESQILISGSENAYHRYAPDGESGIQAKDVSCAVTNLQREPELADSPSATGRGS 255
++ F +++L E+ P +K V V N+ E P G
Sbjct: 80 VKSMSFARTRLLQFALESP-----PISPVSSTSKKVVVKVHNV----EATQHPVKQG--- 127
Query: 256 NQIVADCDSVIRNNTGSCVNHL-GADNSLK 284
N+++ D + TG CV+ L G +N K
Sbjct: 128 NRLM---DKFLIRETGDCVSELLGKENERK 154
Score = 37 (18.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 587 HAVKEKDG--ERKKLKSDVKRHSHKPDSCSESGLEPSYSSDRKKKQKEKDL 635
H K D R++ K ++ +HK ++ D KKK K+ L
Sbjct: 213 HINKHLDSCLSREEKKESLRSSAHKRKPLPKTVYNLLSDRDLKKKLKQHGL 263
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 685 660 0.00097 120 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 623 (66 KB)
Total size of DFA: 396 KB (2192 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 67.99u 0.11s 68.10t Elapsed: 00:00:03
Total cpu time: 68.00u 0.11s 68.11t Elapsed: 00:00:03
Start: Fri May 10 17:23:33 2013 End: Fri May 10 17:23:36 2013