BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035988
(692 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359474777|ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
vinifera]
Length = 711
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/713 (71%), Positives = 591/713 (82%), Gaps = 37/713 (5%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSST 64
++L+EL NVE E++ VQ+QIK L+DRQ++L+ERQSELK+LLEA + S GSP++ G +S
Sbjct: 6 DLLEELFNVELELQDVQDQIKNLLDRQEKLHERQSELKTLLEACKGS-GSPVKDG--ASV 62
Query: 65 AVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
AVENWSG F+WD++ADDVR N+FGI YRANQ+EIINAV+SGRDVLVIMAAGGGKSLCYQ
Sbjct: 63 AVENWSGPFDWDAQADDVRFNIFGISTYRANQREIINAVMSGRDVLVIMAAGGGKSLCYQ 122
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPA+LR+G+ALVVSPLLSLIQDQVM LAALGIPA+MLTSTTSKEDEKFIYKALEKG+G+L
Sbjct: 123 LPAILRDGVALVVSPLLSLIQDQVMGLAALGIPAYMLTSTTSKEDEKFIYKALEKGDGDL 182
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K+LYVTPEKISKSKRF+SKLEKCHH+G LSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ
Sbjct: 183 KILYVTPEKISKSKRFVSKLEKCHHSGCLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 242
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FPDVP++ALTATAT+KVQNDLMEMLHI KCIKFVST+NRPNLFYMVREKSSVG+VVIDEI
Sbjct: 243 FPDVPVVALTATATKKVQNDLMEMLHIPKCIKFVSTVNRPNLFYMVREKSSVGRVVIDEI 302
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
A+YIQESYPN+ESGIVYCFSRKECEQVA+ELR+RGISADYYHADMD+NARE+VH+RWS +
Sbjct: 303 AEYIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNARERVHLRWSNS 362
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
KLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSECLL+FRP DV
Sbjct: 363 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDV 422
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC---------- 474
PRQSSMVFYENSGLQNLYDIV+Y Q E LQ N C
Sbjct: 423 PRQSSMVFYENSGLQNLYDIVQYCQSKRECRRNAFFRHFAEPLQDCNGMCDNCAFSTEVK 482
Query: 475 MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQLIID 534
V ++ A+ +ISLLQD+QDN+QRLTMLQ+VDKMK+K K++ SDL++EEIE LV+QLI D
Sbjct: 483 EVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKVKNKDLGSDLRKEEIEHLVIQLIRD 542
Query: 535 RVL--------------VRIGPF----SPGKKIIKLEISSVQKNTADNKKSTKRSLTSSA 576
RVL V +G S GK+I+KLEIS+ K N KS+KRSLTSS
Sbjct: 543 RVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTKVKTKTGNMKSSKRSLTSSG 602
Query: 577 LEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGK 636
LE +LDELRKEL+S GGI PHSVLS+Q I ++SA+KP+++ E LE +IGKLKT K
Sbjct: 603 LELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSILE-----LETMIGKLKTEK 657
Query: 637 YGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDD 689
YGS+ILE I+K +EQ +N + E QG + RA KR K KAVV+++SS D
Sbjct: 658 YGSKILEEIAKYTETEQP-ENRLKTDEGQGSENRAPKRLKSNKAVVLIESSGD 709
>gi|296085510|emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/713 (70%), Positives = 589/713 (82%), Gaps = 38/713 (5%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSST 64
++L+EL NVE E++ VQ+QIK L+DRQ++L+ERQSELK+LLEA + S GSP++ G +S
Sbjct: 6 DLLEELFNVELELQDVQDQIKNLLDRQEKLHERQSELKTLLEACKGS-GSPVKDG--ASV 62
Query: 65 AVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
AVENWSG F+WD++ADDVR N+FGI YRANQ+EIINAV+SGRDVLVIMAAGGGKSLCYQ
Sbjct: 63 AVENWSGPFDWDAQADDVRFNIFGISTYRANQREIINAVMSGRDVLVIMAAGGGKSLCYQ 122
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPA+LR+G+ALVVSPLLSLIQDQVM LAALGIPA+MLTSTTSKEDEKFIYKALEKG+G+L
Sbjct: 123 LPAILRDGVALVVSPLLSLIQDQVMGLAALGIPAYMLTSTTSKEDEKFIYKALEKGDGDL 182
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K+LYVTPEKISKSKRF+SKLEKCHH+G LSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ
Sbjct: 183 KILYVTPEKISKSKRFVSKLEKCHHSGCLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 242
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FPDVP++ALTATAT+KVQNDLMEMLHI KCIKFVST+NRPNLFYMVREKSSVG+VVIDEI
Sbjct: 243 FPDVPVVALTATATKKVQNDLMEMLHIPKCIKFVSTVNRPNLFYMVREKSSVGRVVIDEI 302
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
A+YIQESYPN+ESGIVYCFSRKECEQVA+ELR+RGISADYYHADMD+NARE+VH+RWS +
Sbjct: 303 AEYIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNARERVHLRWSNS 362
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
KLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSECLL+FRP DV
Sbjct: 363 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDV 422
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC---------- 474
PRQSSMVFYENSGLQNLYDIV+Y Q E LQ N C
Sbjct: 423 PRQSSMVFYENSGLQNLYDIVQYCQSKRECRRNAFFRHFAEPLQDCNGMCDNCAFSTEVK 482
Query: 475 MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQLIID 534
V ++ A+ +ISLLQD+QDN+QRLTMLQ+VDKMK+K K++ SDL++EEIE LV+QLI D
Sbjct: 483 EVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKVKNKDLGSDLRKEEIEHLVIQLIRD 542
Query: 535 RVL--------------VRIG----PFSPGKKIIKLEISSVQKNTADNKKSTKRSLTSSA 576
RVL V +G S GK+I+KLEIS+ K N KS+KRSLTSS
Sbjct: 543 RVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTKVKTKTGNMKSSKRSLTSSG 602
Query: 577 LEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGK 636
LE +LDELRKEL+S GGI PHSVLS+Q I ++SA+KP+++ EA + +IGKLKT K
Sbjct: 603 LELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSILEAKT-----MIGKLKTEK 657
Query: 637 YGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDD 689
YGS+ILE I+K +EQ N + QG + RA KR K KAVV+++SS D
Sbjct: 658 YGSKILEEIAKYTETEQPE--NVPPDDRQGSENRAPKRLKSNKAVVLIESSGD 708
>gi|224074554|ref|XP_002304389.1| predicted protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/719 (70%), Positives = 588/719 (81%), Gaps = 33/719 (4%)
Query: 1 METE-EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEAS-RGSPIQY 58
METE ++L+EL N+E E+ VQ+QIK L++RQ++L+ERQSELK LLEA++AS G+
Sbjct: 1 METEADVLEELLNIETEIEDVQDQIKLLLERQEKLHERQSELKFLLEAYKASGTGNSANE 60
Query: 59 GGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
S S+++E+WSG+FEWDS+ADDVRLN+FGIP+YR NQ+EIINA++SGRDVLVIMAAGGG
Sbjct: 61 NASRSSSLEDWSGSFEWDSQADDVRLNIFGIPSYRQNQKEIINAIMSGRDVLVIMAAGGG 120
Query: 119 KSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
KSLCYQLPA+LR+G+ALV+SPLLSLIQDQVM L ALGIPA MLTSTTSKE+EKFIYKALE
Sbjct: 121 KSLCYQLPAILRDGVALVISPLLSLIQDQVMGLTALGIPAFMLTSTTSKENEKFIYKALE 180
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
KGEGELK+LYVTPEKISKSKRFMSKLEKCH+AGRLSLISIDEAHCCSQWGHDFRPDYK+L
Sbjct: 181 KGEGELKILYVTPEKISKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKSL 240
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
ILKTQF +VP++ALTATATQKVQ D+MEML I KC+KFVST+NRPNLFY VR KSSVGK
Sbjct: 241 SILKTQFSNVPVVALTATATQKVQYDVMEMLRIPKCVKFVSTVNRPNLFYTVRSKSSVGK 300
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
VV+DEIA++IQESY NSESGIVYCFSRKECEQVA ELR+RGI+ADYYHADMD+NAREKVH
Sbjct: 301 VVVDEIAEFIQESYSNSESGIVYCFSRKECEQVAAELRERGIAADYYHADMDVNAREKVH 360
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+LF
Sbjct: 361 TWWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLF 420
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC---- 474
+RPADVPRQSSMVFYENSGLQNLYDIVRY Q E LQ N C
Sbjct: 421 YRPADVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRNAFFRHFAEPLQDCNGMCDNCA 480
Query: 475 ------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLV 528
V ++ HA+ ++SLLQD Q+ +QRLTMLQLVDKMK K KE+ SD+K+EE+EQLV
Sbjct: 481 FLSEVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQLVDKMKNK-KELGSDIKKEEMEQLV 539
Query: 529 LQLIIDRVL--------------VRIGPFS----PGKKIIKLEISSVQKNTADNKKSTKR 570
+QLI+D V V IGP + GKKI+KLEISS QKN D+ KS K
Sbjct: 540 IQLILDFVFKEEYQHTAYATNAYVTIGPLANQVLQGKKIVKLEISSKQKNKGDSMKSAKH 599
Query: 571 SLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIG 630
SL S LE +LDELR++L+S GGI PHSVLSSQ + +IS++KPS+ +EAS HLEKIIG
Sbjct: 600 SLAFSGLELKLDELREKLSSGHGGIFPHSVLSSQQMSMISSQKPSSAQEASPYHLEKIIG 659
Query: 631 KLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDD 689
KLKT KYGS+IL+ I K SE +N + EE+G RASKR K +K +VV++SSD+
Sbjct: 660 KLKTEKYGSKILDEIKKYTGSEP--PDNGMLNEEEGSGNRASKRLKTKKGIVVIESSDE 716
>gi|356531519|ref|XP_003534325.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Glycine max]
Length = 695
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/713 (68%), Positives = 575/713 (80%), Gaps = 46/713 (6%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME EIL+EL N+E E++ VQEQI+ L++RQ+ LYER+SEL ++LEA + S +
Sbjct: 1 MENNEILEELLNIEVEIQDVQEQIRALIERQESLYERKSELSAILEA---CKESGNEANN 57
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
++S+A ENWSG FEWDS ADDVRLNVFGI +YRANQ+EIINA++SGRDVLVIMAAGGGKS
Sbjct: 58 AASSAAENWSGEFEWDSEADDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGKS 117
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPAVLR+GIALVVSPLLSLIQDQVM L ALGIPA+MLTST +K DEKFIYK LEKG
Sbjct: 118 LCYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTST-NKGDEKFIYKTLEKG 176
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
EGELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK+L I
Sbjct: 177 EGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLSI 236
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LKTQFP VP++ALTATATQ+VQNDL+EMLHI +C+KFVST+NRPNLFYMV+EKSSVGKVV
Sbjct: 237 LKTQFPRVPIVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVV 296
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
IDEIA++IQESYPN+ESGIVYCFSRKECEQVA+ELR+RGISADYYHADMD+NAREKVHMR
Sbjct: 297 IDEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNAREKVHMR 356
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSECLL+FR
Sbjct: 357 WSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFR 416
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVV--- 477
P D PRQSSMVFYENSGLQNLYDIVRY E LQ+ N C +
Sbjct: 417 PGDAPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRSAFFHHFAEPLQECNGMCDICAFS 476
Query: 478 -------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQ 530
++GHA+ ++SLLQD+Q N+QR TMLQLVDKMKIK KE+ S+LKREEIEQL+L
Sbjct: 477 SEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQLVDKMKIKQKELGSELKREEIEQLILH 536
Query: 531 LIIDRVL--------------VRIGPFSP----GKKIIKLEISSVQKNTADNKKSTKRSL 572
L++ R L + +G + GKK +KLEI + Q+ T D +S K+ L
Sbjct: 537 LLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGKKSVKLEIYTEQR-TKDGVRSAKQCL 595
Query: 573 TSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKL 632
SS LE +LDELRKEL+S GGILPHSVLS++ I ++++KP+++E+ LEK+IGKL
Sbjct: 596 GSSGLELKLDELRKELSSAHGGILPHSVLSTEQIIQLASQKPNSLEQ-----LEKLIGKL 650
Query: 633 KTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVD 685
+T KYG+RIL+ I E+ +D K+E DARA+KR K +K +V+++
Sbjct: 651 RTEKYGNRILKQI------EKYYDFEPTDKQEI--DARAAKRLKSKKNLVIIE 695
>gi|255557667|ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative [Ricinus communis]
Length = 714
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/709 (67%), Positives = 567/709 (79%), Gaps = 44/709 (6%)
Query: 12 NVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEAS--RGSPIQYGGSSSTAVE-N 68
NVEAE++ VQE+I+ L++RQ++L ER+SELK++LE +S RG+P S +TA + N
Sbjct: 18 NVEAEIQDVQEEIQVLLERQEKLNERKSELKAILETCSSSTRRGAP----SSPTTASDIN 73
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WSG FEWD++AD + +VFGI +YR NQ+EI+NAV+SGRDVLVIMAAGGGKSLCYQLPA+
Sbjct: 74 WSGPFEWDAQADRDKFHVFGITSYRPNQREIVNAVMSGRDVLVIMAAGGGKSLCYQLPAI 133
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
LR+G++LV+SPL+SLIQDQVM L ALGIPA+ LTSTTSKEDEKFIYKALEKGE LK+LY
Sbjct: 134 LRDGVSLVISPLISLIQDQVMGLKALGIPAYKLTSTTSKEDEKFIYKALEKGEEMLKILY 193
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPEK+SKSKRFMSKLEKCHH G LS+I+IDEAHCCSQWGHDFRPDYKNLGILK QFP+V
Sbjct: 194 VTPEKVSKSKRFMSKLEKCHHRGHLSIIAIDEAHCCSQWGHDFRPDYKNLGILKIQFPNV 253
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P++ALTATATQKVQ DLMEMLHI KC++FVST+NRPNLFYMVREKSSVGKVVIDEIA++I
Sbjct: 254 PVLALTATATQKVQYDLMEMLHIPKCVRFVSTVNRPNLFYMVREKSSVGKVVIDEIAEFI 313
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ESYPN+ESGIVYCFSRKECEQVA +LR+RGISADYYHADMD+NAREKVHMRWS+NKLQV
Sbjct: 314 RESYPNNESGIVYCFSRKECEQVAADLRERGISADYYHADMDVNAREKVHMRWSQNKLQV 373
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
IVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDG PSEC+LFFRP DVPRQS
Sbjct: 374 IVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGAPSECVLFFRPGDVPRQS 433
Query: 429 SMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC----------MVVL 478
SMVFYENSGLQNLYDIVRY Q E LQ N C V +
Sbjct: 434 SMVFYENSGLQNLYDIVRYCQSKRTCRRSAFFRHFSEPLQDCNGMCDNCAFSNEVMEVDV 493
Query: 479 AGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQLIIDRVL- 537
HA+ ++SLLQD+ DN+QRLTMLQLVDK+K K KE+ +DLKREEIEQLV+QLI+D V
Sbjct: 494 TSHAKTMVSLLQDMHDNDQRLTMLQLVDKVKNKHKELGADLKREEIEQLVIQLILDNVFK 553
Query: 538 -------------VRIGPFSP----GKKIIKLEISSVQKNTADNKKSTKRSLTSSALEFE 580
V+ GP + G+KI+KLEIS+ Q K+ KRSL S LEF+
Sbjct: 554 EEFQHTAYATNAYVKTGPLAKQVLQGRKIVKLEISNKQNKDGKMNKA-KRSLMLSGLEFK 612
Query: 581 LDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKYGSR 640
LD+LRKEL++ GILPHSVLSSQ + +ISA+KP++ EE LEKIIGKLKT +YG+R
Sbjct: 613 LDKLRKELSAEHEGILPHSVLSSQQMSMISAQKPNSTEE-----LEKIIGKLKTERYGNR 667
Query: 641 ILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDD 689
ILE I K S + DN ++ E G R SKR K +K +V+++SSDD
Sbjct: 668 ILEEIKKFAGSNES-DNGILNDE--GSKRRPSKRLKTKKDLVLIESSDD 713
>gi|297851930|ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
gi|297339688|gb|EFH70105.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
Length = 704
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/721 (64%), Positives = 563/721 (78%), Gaps = 46/721 (6%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME+E I +EL+N++ E++ VQ QI L++ QD+LYER+SELK+LL+A A+ GSP+ G
Sbjct: 1 MESEAIQEELQNLDVELKDVQGQISALIEHQDRLYERKSELKTLLKAL-ATSGSPVASSG 59
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
S+ A+ENWS FEWDSRADDVR NVFGI YRANQ+EIINA+++GRDVLVIMAAGGGKS
Sbjct: 60 SN--AIENWSEAFEWDSRADDVRFNVFGISKYRANQKEIINAIMAGRDVLVIMAAGGGKS 117
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+LR G LVVSPLLSLIQDQVM LAALGI A+MLTST+ KE+EKF+YKALEKG
Sbjct: 118 LCYQLPAILRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKG 177
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
E +LK+LYVTPEK+SKSKRFMSKLEKCH+AGRLSLISIDEAHCCSQWGHDFRPDYKNL I
Sbjct: 178 EHDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSI 237
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LKTQFP VPM+ALTATATQKVQNDL+EMLHI KC+KFVS++NRPNLFY VREKS+VGKVV
Sbjct: 238 LKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKVV 297
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+DEIA++I+ESY N+ESGIVYCFSRKECEQ+A +LR+RGISADYYHADMD N REKVHMR
Sbjct: 298 VDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMR 357
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+LFFR
Sbjct: 358 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFR 417
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC------ 474
ADVPRQSSMVFYE SGLQNLYDIVRY Q E Q N C
Sbjct: 418 SADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEPSQDCNGMCDNCALS 477
Query: 475 ----MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQ 530
V ++ ++ ++S++Q+ Q +QR+TMLQL DK++ K K++ ++LKR+EIE LV++
Sbjct: 478 SEVKEVDVSDLSKLVVSMVQETQSKDQRVTMLQLGDKLRNKHKDLSAELKRDEIEHLVIK 537
Query: 531 LIIDRVL--------------VRIGPFS----PGKKIIKLEISSVQKNTADNKKSTKRSL 572
LI+D VL V +GP + G+K IK+E SS Q K KRSL
Sbjct: 538 LIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSRQ------TKKPKRSL 591
Query: 573 TSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKL 632
+ S LE LDELRKE+++ G ILPH+VLS+Q I LIS++KP +++E LE IIGKL
Sbjct: 592 SFSGLELNLDELRKEISAADGSILPHTVLSTQQISLISSQKPVSLQE-----LESIIGKL 646
Query: 633 KTGKYGSRIL-EVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDDSE 691
KT KYG RIL EV+ SEQ ++ +E+ ++R+ KR K +K ++V+SS + E
Sbjct: 647 KTEKYGDRILEEVMRHEAVSEQLVEDPT---KEETCNSRSRKRAKTQKDAILVESSGEEE 703
Query: 692 V 692
Sbjct: 704 A 704
>gi|30692489|ref|NP_174421.2| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
gi|75334308|sp|Q9FT73.1|MED34_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
34; AltName: Full=ATP-dependent DNA helicase Q-like 2;
AltName: Full=RecQ-like protein 2; Short=AtRecQ2;
Short=AtRecQl2
gi|11121445|emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana]
gi|332193225|gb|AEE31346.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
Length = 705
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/721 (65%), Positives = 565/721 (78%), Gaps = 45/721 (6%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME+E I ++L+N++ E++ VQ QI L++ QD+LYER+SELK+LL+A AS GSP+ G
Sbjct: 1 MESEAIQEDLQNLDVELKDVQGQISALIEHQDRLYERKSELKTLLKALAAS-GSPVASSG 59
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
SS A+ENWS TFEWDSRADDVR NVFGI YRANQ+EIINA+++GRDVLVIMAAGGGKS
Sbjct: 60 GSS-AIENWSETFEWDSRADDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKS 118
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+LR G LVVSPLLSLIQDQVM LAALGI A+MLTST+ KE+EKF+YKALEKG
Sbjct: 119 LCYQLPAMLRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKG 178
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
E +LK+LYVTPEK+SKSKRFMSKLEKCH+AGRLSLISIDEAHCCSQWGHDFRPDYKNL I
Sbjct: 179 EDDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSI 238
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LKTQFP VPM+ALTATATQKVQNDL+EMLHI KC+KFVS++NRPNLFY VREKS+VGK+V
Sbjct: 239 LKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLV 298
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+DEIA++I+ESY N+ESGIVYCFSRKECEQ+A +LR+RGISADYYHADMD N REKVHMR
Sbjct: 299 VDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMR 358
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+LFFR
Sbjct: 359 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFR 418
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC------ 474
ADVPRQSSMVFYE SGLQNLYDIVRY Q E Q N C
Sbjct: 419 SADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEPSQDCNGMCDNCALS 478
Query: 475 ----MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQ 530
V ++ ++ ++S++Q+ Q +QR+TMLQL DK++ K K++ ++LKR+E+E LV++
Sbjct: 479 SEVKEVDVSDLSKLVVSMVQETQAKDQRVTMLQLGDKLRNKHKDLIAELKRDEVEHLVIK 538
Query: 531 LIIDRVL--------------VRIGPFS----PGKKIIKLEISSVQKNTADNKKSTKRSL 572
LI+D VL V +GP + G+K IK+E SS Q K KRS+
Sbjct: 539 LIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSRQ------TKKLKRSI 592
Query: 573 TSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKL 632
T S LE +LDELRKE+++ G ILPH+VLS+Q I IS++KP +++E LE IIGKL
Sbjct: 593 TFSGLELKLDELRKEISAADGSILPHTVLSTQQIGSISSQKPVSLQE-----LESIIGKL 647
Query: 633 KTGKYGSRIL-EVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDDSE 691
KT KYG RIL EV+ SEQ ++ +KEE + +R KR K +K VV+V+SS + E
Sbjct: 648 KTEKYGDRILEEVMRHEAVSEQLVEDP--TKEETCK-SRLRKRAKTQKDVVLVESSGEEE 704
Query: 692 V 692
Sbjct: 705 A 705
>gi|449453437|ref|XP_004144464.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 738
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/747 (62%), Positives = 568/747 (76%), Gaps = 69/747 (9%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
M EE+L+EL NVE ++ VQ +I L++RQD LY+R+SEL+SLLE + S + G
Sbjct: 1 MNPEEVLEELLNVEVQINEVQAEINLLLERQDNLYQRKSELQSLLELCNETEDS-VSQGT 59
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ST ENWSG+F+WDS ADDV+LN+FGI +YRANQ+EI+NAV+SGRDVLVIMAAGGGKS
Sbjct: 60 GTSTNSENWSGSFKWDSEADDVKLNIFGISSYRANQREIVNAVMSGRDVLVIMAAGGGKS 119
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+L +GIALVVSPLLSLIQDQVM LAALGI A MLTS TSKEDEK IYK LEKG
Sbjct: 120 LCYQLPALLYDGIALVVSPLLSLIQDQVMGLAALGISASMLTSATSKEDEKLIYKNLEKG 179
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
EG +K+LYVTPEK+SKSKRFMSKLEKC+HAGRLSLI+IDEAHCCSQWGHDFRPDYKNLGI
Sbjct: 180 EGSMKILYVTPEKVSKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGI 239
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LKTQFP+ P++ALTATATQ+VQNDL+EML I K +KFVST+NRPNLFYMVREKSSV KVV
Sbjct: 240 LKTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVV 299
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
ID+IA++IQESYPN+ESGI+YCFSRKECEQVA+ELR RGISAD+YHADMD AREKVHMR
Sbjct: 300 IDQIAEFIQESYPNNESGIIYCFSRKECEQVAKELRLRGISADHYHADMDSVAREKVHMR 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS ++LQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSECLL++R
Sbjct: 360 WSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYYR 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQY---------------PL------------- 452
P DVPRQSSMVFYENSGL+NLY IV+Y Q PL
Sbjct: 420 PGDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSVFFRHFAEPLKDCNGTSSPHFLK 479
Query: 453 ----HWNIEK-----VRLVIFEKLQ---QVNLFCMVVLAGHAQCIISLLQDIQDNNQRLT 500
+W V + F K ++ + L GHA+ IIS+LQD+Q +NQ++T
Sbjct: 480 LVFVYWKGGTTPYFVVFFLFFSKENFSFNFDVLYFIFLIGHARVIISILQDVQKSNQKMT 539
Query: 501 MLQLVDKMKIKLKEIDSDLKREEIEQLVLQLIIDRVL--------------VRIGPFS-- 544
MLQLVDK+K K + SDL++EEIEQL++QL++DRVL V +GP +
Sbjct: 540 MLQLVDKLKTKHNGLVSDLRKEEIEQLIIQLLLDRVLKEEFQHTAYATNAYVTVGPLARQ 599
Query: 545 --PGKKIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASISGGILPHSVLS 602
GKK++K+EIS QK T KS ++S+ S LE +LD+LRKELASI GGI PHSVLS
Sbjct: 600 VLQGKKVVKIEISGKQKVTG--VKSKRKSVAPSGLECKLDKLRKELASIDGGIFPHSVLS 657
Query: 603 SQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSK 662
+Q I ++SA+KP+++++ LE +IGK+K KYG RILE I K + + NA +
Sbjct: 658 TQQIVVLSAQKPTSLDQ-----LETMIGKVKAEKYGDRILEEIEKWSIGQ---NPNASEE 709
Query: 663 EEQGRDARASKRTKKEKAVVVVDSSDD 689
E++ + R KR K VV++SSD+
Sbjct: 710 EQEEDENRTPKRPKTIDTHVVIESSDE 736
>gi|357484579|ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula]
gi|355513912|gb|AES95535.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula]
Length = 685
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/718 (63%), Positives = 553/718 (77%), Gaps = 64/718 (8%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME E+L+EL NVEAE+ VQE+I+ L+++Q++LYER+SEL S+L+A + S
Sbjct: 1 MENYEVLEELHNVEAEIEDVQEKIRALIEKQERLYERKSELNSILDACKESENQV--NNA 58
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+SS+AVENW+GTFEWDS+ADD+RLN+FGI +YRANQ+EIINA+LSGRDVLVIMAAGGGKS
Sbjct: 59 ASSSAVENWNGTFEWDSQADDLRLNIFGISSYRANQKEIINAILSGRDVLVIMAAGGGKS 118
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEK-FIYKALEK 179
LCYQLPAVLR G+ALVVSPLLSLIQDQVM L ALGIPA+MLTSTTSK++EK +I +
Sbjct: 119 LCYQLPAVLRNGVALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKDNEKVYIQSFWRR 178
Query: 180 GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
G+LK+LYVTPEKI+K + I EAHCCSQWGHDFRPDYKNLG
Sbjct: 179 ARGDLKLLYVTPEKITKKQE------------------IYEAHCCSQWGHDFRPDYKNLG 220
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
ILKTQFP+VPM+ALTATATQ+VQNDL+EMLHIR+C+KFVST+NRPNLFYMV+EKSSV KV
Sbjct: 221 ILKTQFPNVPMVALTATATQRVQNDLVEMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSKV 280
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHM 359
V+DEIA++IQESYPN ESGIVYCFSRKECEQVA+ELR+RGISA +YHADMD+N REKVHM
Sbjct: 281 VVDEIAEFIQESYPNHESGIVYCFSRKECEQVAKELRERGISAGHYHADMDVNDREKVHM 340
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
RWS NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSECLL+F
Sbjct: 341 RWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYF 400
Query: 420 RPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVV-- 477
RP DVPRQSSMVFYENSGLQNLYDIVRY Q E LQ+ N C +
Sbjct: 401 RPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAF 460
Query: 478 --------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVL 529
++ HA+ ++SLLQDIQ ++QR TMLQLV+KMK K KEI S LKREE+EQL+L
Sbjct: 461 SCEVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQLVEKMKTKQKEIGSYLKREEMEQLIL 520
Query: 530 QLIIDRVL--------------VRIGPFSP----GKKIIKLEISSVQKNTADNKKSTKRS 571
L+++R L + +GP + GKK +KLEIS+ +K A + KRS
Sbjct: 521 HLLLERALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEISTEEKTKASAR--LKRS 578
Query: 572 LTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGK 631
L SS LE +LDELRKEL+S GGILPHSVLS+Q I L+ ++KP+++EE LEK IGK
Sbjct: 579 LGSSGLELKLDELRKELSSNHGGILPHSVLSTQQISLLCSQKPNSLEE-----LEKAIGK 633
Query: 632 LKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDD 689
LKT KYG++IL I K + E +EQ D RA+KR+K +K +V++++S+D
Sbjct: 634 LKTEKYGNKILAQIVKYSDFEL--------TDEQVNDGRAAKRSKTKKNLVLIETSED 683
>gi|293332763|ref|NP_001168975.1| uncharacterized protein LOC100382802 [Zea mays]
gi|223974195|gb|ACN31285.1| unknown [Zea mays]
Length = 710
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/725 (63%), Positives = 553/725 (76%), Gaps = 52/725 (7%)
Query: 1 METEEILQ-ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYG 59
ME EE ++ EL VE+++ +Q QIK L+DRQ++LYERQ++LK+LLEA + +R + I
Sbjct: 1 MEDEENIEGELLLVESQLHDIQGQIKTLLDRQEELYERQAQLKALLEASKLTRNTTIN-- 58
Query: 60 GSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
+SS A E+WSG+F WD ADD R N+FGI +YR+NQ+EIINAV+SGRDVLVIMAAGGGK
Sbjct: 59 -TSSVAPEDWSGSFPWDLEADDTRFNIFGISSYRSNQREIINAVMSGRDVLVIMAAGGGK 117
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SLCYQLPAVLR+GIALVVSPLLSLIQDQVM L+ALGIPA+MLTSTT+KE EKFIYK L+K
Sbjct: 118 SLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLSALGIPAYMLTSTTNKEVEKFIYKTLDK 177
Query: 180 GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
GEGELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLI+IDEAHCCSQWGHDFRPDYKNLG
Sbjct: 178 GEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLG 237
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
ILK QFP VPM+ALTATAT KVQ DLMEMLHI +CIKFVST+NRPNLFY V EKS VGKV
Sbjct: 238 ILKIQFPSVPMIALTATATSKVQMDLMEMLHIPRCIKFVSTVNRPNLFYKVSEKSPVGKV 297
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHM 359
VIDEI K+I ESYPN+ESGI+YCFSRKECEQVA+ELR+RGISADYYHADMDI REK+HM
Sbjct: 298 VIDEITKFISESYPNNESGIIYCFSRKECEQVAKELRERGISADYYHADMDIVNREKIHM 357
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
RWSK K QVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+L++
Sbjct: 358 RWSKGKSQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYY 417
Query: 420 RPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC----- 474
RP DVPRQSSMVFYEN GLQNLYDIVRY Q E Q N C
Sbjct: 418 RPGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRHGAFFRHFGEVPQDCNGMCDNCAS 477
Query: 475 -----MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDS-----DLKREEI 524
+ + H + I+SLL D+Q N+QR T+LQLVDK K K K + S DL++EE+
Sbjct: 478 TIEQKDIDVTYHTKIIVSLLHDMQLNDQRATLLQLVDKFKSKWKGLGSFNEAVDLRKEEV 537
Query: 525 EQLVLQLIIDRVL--------------VRIG----PFSPGKKIIKLEISSVQKNTADNKK 566
EQL++ LI+D VL V +G P G +++KLEI+ K+ K
Sbjct: 538 EQLIVNLILDNVLKEEFQHTAYSTNAYVTLGALWKPALQGNRVVKLEIAIASKDRDVRSK 597
Query: 567 STKRSLTSSALEFELDELRKELASI-SGGILPHSVLSSQLIRLISARKPSTMEEASSNHL 625
KR S LE +LDELR++L+S S I PH+VL++Q I L+S++KP+T E L
Sbjct: 598 GAKRGRMSD-LEAKLDELRRDLSSTGSDAIFPHAVLTAQQISLLSSQKPTTPAE-----L 651
Query: 626 EKIIGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSK-EEQGRDARASKRTKKEKAVVVV 684
EK+IGK+KT KYGS+I+E++ + HDN+ + +E G + RA K K++ VV V
Sbjct: 652 EKVIGKVKTRKYGSKIIELM-------RSHDNSGSGRGKEAGDEHRAKKIKTKDEDVVCV 704
Query: 685 DSSDD 689
+SS++
Sbjct: 705 ESSEE 709
>gi|357113938|ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Brachypodium
distachyon]
Length = 704
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/705 (64%), Positives = 541/705 (76%), Gaps = 58/705 (8%)
Query: 20 VQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVENWSGTFEWDSRA 79
+Q++IK L+DRQ++LYERQS+L++LLE + SR + + S A E+WSG F WDS+A
Sbjct: 21 LQDKIKMLLDRQEELYERQSQLQALLEISKTSRDAA---SSAPSVAPEDWSGKFSWDSQA 77
Query: 80 DDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSP 139
DD+R NVFGI +YR+NQ+EIIN+++SG+DVLVIMAAGGGKSLCYQLPAVLR+GIALVVSP
Sbjct: 78 DDIRFNVFGISSYRSNQREIINSIMSGKDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSP 137
Query: 140 LLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKR 199
LLSLIQDQVM L ALGIPA+MLTSTT+KE EK IYKALEKGEGELK+LYVTPEKISKSKR
Sbjct: 138 LLSLIQDQVMGLTALGIPAYMLTSTTNKEVEKLIYKALEKGEGELKILYVTPEKISKSKR 197
Query: 200 FMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQ 259
FMSKLEKCHHAGRLSL++IDEAHCCSQWGHDFRPDYKNLGILK QFP VPM+ALTATAT
Sbjct: 198 FMSKLEKCHHAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKIQFPSVPMIALTATATS 257
Query: 260 KVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGI 319
KVQ DL+EMLHI +C+KFVST+NRPNL+Y V EKSSVGKVVIDEIA +I ESYPN ESGI
Sbjct: 258 KVQMDLIEMLHIPRCVKFVSTVNRPNLYYKVYEKSSVGKVVIDEIANFITESYPNKESGI 317
Query: 320 VYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
VYCFSRKECEQVA+ELR+RGI+ADYYHADMD AREKVHMRWSK+K QVIVGTVAFGMGI
Sbjct: 318 VYCFSRKECEQVAKELRERGIAADYYHADMDSVAREKVHMRWSKSKSQVIVGTVAFGMGI 377
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
NKPDVRFV+HHSLSKS+ETYYQESGRAGRDGLPSEC+L++RP DVPRQSSMVFYEN GLQ
Sbjct: 378 NKPDVRFVVHHSLSKSMETYYQESGRAGRDGLPSECVLYYRPGDVPRQSSMVFYENCGLQ 437
Query: 440 NLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAG----------HAQCIISLL 489
NLYDIVRY Q E +Q+ N C + H + I+SLL
Sbjct: 438 NLYDIVRYCQSKKSCRRGAFFQHFGEAVQECNGMCDNCASSIELKDIDATYHTKIIVSLL 497
Query: 490 QDIQDNNQRLTMLQLVDKMKIKLKEIDS-----DLKREEIEQLVLQLIIDRVL------- 537
QD+Q N+QR T+LQLVDK K K K DLK+EEIEQL++QLIIDRVL
Sbjct: 498 QDMQHNDQRATLLQLVDKFKTKWKHSGCSNEAVDLKKEEIEQLIVQLIIDRVLKEEFQHT 557
Query: 538 -------VRIGPFSP----GKKIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRK 586
V +GP G + +KL + ++T KSTKRS S+ LE +LD+LR+
Sbjct: 558 AYTTNAYVALGPLWKLALQGNRPVKLTGAIHSQDTGGASKSTKRSQMSN-LEAKLDDLRR 616
Query: 587 ELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKYGSRILEVIS 646
++S +GGI PH+VLS+Q I L+S+ KP+T+ E LE +IGK+K KYGS I+EV+
Sbjct: 617 TISSDNGGIFPHAVLSTQQISLLSSHKPTTIAE-----LENLIGKVKADKYGSDIIEVMQ 671
Query: 647 KCGNSEQQHDNNAVSKEEQGRDA--RASKRTKKEKAVVVVDSSDD 689
S+ + G+D+ +KR KK+K VV+V+SS++
Sbjct: 672 --------------SEIDGGKDSGENGAKRQKKDKDVVLVESSEE 702
>gi|77552739|gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 707
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/725 (63%), Positives = 548/725 (75%), Gaps = 54/725 (7%)
Query: 2 ETEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS 61
E + I EL V+AE+ +Q QI L+DRQ++LYER+S+LK++LE +AS + +
Sbjct: 3 EEDNIQGELLLVQAELDDIQGQISALIDRQEELYERESQLKAMLEVSKASNNT---INNT 59
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
S ++WSG+F WDSRADDVR NVFGI +YR NQ+EIINA++SGRDVLVIMAAGGGKSL
Sbjct: 60 PSVGPKDWSGSFLWDSRADDVRFNVFGISSYRQNQREIINAIMSGRDVLVIMAAGGGKSL 119
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
CYQLPAVL +GI LVVSPLLSLIQDQVM LAALGI A+ML STT+KE EKF+YKAL+KGE
Sbjct: 120 CYQLPAVLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTTNKEVEKFVYKALDKGE 179
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
GELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLI+IDEAHCCSQWGHDFRPDYKNLGIL
Sbjct: 180 GELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 239
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
K QFP VPM+ALTATAT KVQ DL+EMLHI +C+KFVSTINRPNLFY V EKS VGKVVI
Sbjct: 240 KVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLFYKVFEKSPVGKVVI 299
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
DEIA +I ESYPN+ESGIVYCFSRKECEQVA+EL +RGI ADYYHADMD+ +REKVHMRW
Sbjct: 300 DEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYHADMDVISREKVHMRW 359
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
SK+KLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+L++RP
Sbjct: 360 SKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYRP 419
Query: 422 ADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC------- 474
DVPRQSSMVFYEN GLQNLYDIVRY Q E Q N C
Sbjct: 420 GDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAFFRHFGEAAQDCNGMCDNCTSSL 479
Query: 475 ---MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDS-----DLKREEIEQ 526
+ H + I+SLL DIQ N+QR T+LQLVDK K K K++ DLK+E IEQ
Sbjct: 480 ELKEIDATHHTKIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDLGCSNESIDLKKEGIEQ 539
Query: 527 LVLQLIIDRVL--------------VRIGP-FSP---GKKIIKLEISSVQKNTADNKKST 568
LV+QLI+DRVL V +GP + P G + +KL ++ ++ K T
Sbjct: 540 LVVQLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRT 599
Query: 569 KRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKI 628
KR+ S+ LE +LD+LR+EL+S +GG+ PH+VLS+Q I L++ +KP+T+ E LEK+
Sbjct: 600 KRNQMSN-LEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAE-----LEKL 653
Query: 629 IGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKA-VVVVDSS 687
IGK+KTGKYGS I+E++ + E G A ASKR KK+K V+ V+SS
Sbjct: 654 IGKVKTGKYGSAIIELMLL-----------HIDSEVAGGKACASKRQKKDKEDVICVESS 702
Query: 688 DDSEV 692
++ +V
Sbjct: 703 EEEDV 707
>gi|6692125|gb|AAF24590.1|AC007654_6 T19E23.16 [Arabidopsis thaliana]
Length = 849
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/825 (57%), Positives = 578/825 (70%), Gaps = 145/825 (17%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME+E I ++L+N++ E++ VQ QI L++ QD+LYER+SELK+LL+A AS GSP+ G
Sbjct: 35 MESEAIQEDLQNLDVELKDVQGQISALIEHQDRLYERKSELKTLLKALAAS-GSPVASSG 93
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
SS A+ENWS TFEWDSRADDVR NVFGI YRANQ+EIINA+++GRDVLVIMAAGGGKS
Sbjct: 94 GSS-AIENWSETFEWDSRADDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKS 152
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMC-------------LAALGIPAHMLTSTTSK 167
LCYQLPA+LR G LVVSPLLSLIQDQ +C LAALGI A+MLTST+ K
Sbjct: 153 LCYQLPAMLRGGTTLVVSPLLSLIQDQYVCYDQLLLMIVQVMGLAALGISAYMLTSTSGK 212
Query: 168 EDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQW 227
E+EKF+YKALEKGE +LK+LYVTPEK+SKSKRFMSKLEKCH+AGRLSLISIDEAHCCSQW
Sbjct: 213 ENEKFVYKALEKGEDDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQW 272
Query: 228 GHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLF 287
GHDFRPDYKNL ILKTQFP VPM+ALTATATQKVQNDL+EMLHI KC+KFVS++NRPNLF
Sbjct: 273 GHDFRPDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLF 332
Query: 288 YMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHA 347
Y VREKS+VGK+V+DEIA++I+ESY N+ESGIVYCFSRKECEQ+A +LR+RGISADYYHA
Sbjct: 333 YSVREKSAVGKLVVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHA 392
Query: 348 DMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQ------ 401
DMD N REKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQ
Sbjct: 393 DMDANMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQVPVSCP 452
Query: 402 -----ESGRAGRDGLPSECLLFFRPADVPR---------QSSMVFYENSGLQNLYDIVRY 447
ESGRAGRDGLPSEC+LFFR ADVPR QSSMVFYE SGLQNLYDIVRY
Sbjct: 453 LKLDIESGRAGRDGLPSECILFFRSADVPRQLMLSFSPQQSSMVFYEYSGLQNLYDIVRY 512
Query: 448 SQ---------YPLHW--------NIEKVRL----VIFEKLQQVN-------------LF 473
Q + H+ I R+ + ++++V+ +F
Sbjct: 513 CQSKTKCRRSAFFRHFGEPSQDCNGILVYRMCDNCALSSEVKEVDVSEYQPYVDNIIIIF 572
Query: 474 CMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQLII 533
+++ A ++ ++S++Q+ Q +QR+TMLQL DK++ K K++ ++LKR+E+E LV++LI+
Sbjct: 573 GVMIFADLSKLVVSMVQETQAKDQRVTMLQLGDKLRNKHKDLIAELKRDEVEHLVIKLIV 632
Query: 534 DRVL--------------VRIGPFS----------------------------------- 544
D VL V +GP +
Sbjct: 633 DSVLKEEFQHTPYSTNAYVTMGPLANQLLQGKEKRNTFSSRSNEHYVGFGIWNTLFSRFG 692
Query: 545 ---------PGKKIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASISGGI 595
+K IK+E SS Q K KRS+T S LE +LDELRKE+++ G I
Sbjct: 693 RSQIKRSHRSRRKTIKMETSSRQ------TKKLKRSITFSGLELKLDELRKEISAADGSI 746
Query: 596 LPHSVLSSQLIRLISARKPSTMEEAS--------SNHLEKIIGKLKTGKYGSRIL-EVIS 646
LPH+VLS+Q I IS++KP +++EAS LE IIGKLKT KYG RIL EV+
Sbjct: 747 LPHTVLSTQQIGSISSQKPVSLQEASFPLIFIWLDLQLESIIGKLKTEKYGDRILEEVMR 806
Query: 647 KCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDDSE 691
SEQ ++ +KEE + +R KR K +K VV+V+SS + E
Sbjct: 807 HEAVSEQLVEDP--TKEETCK-SRLRKRAKTQKDVVLVESSGEEE 848
>gi|62733310|gb|AAX95427.1| DNA Helicase-related [Oryza sativa Japonica Group]
Length = 759
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/785 (58%), Positives = 553/785 (70%), Gaps = 122/785 (15%)
Query: 2 ETEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS 61
E + I EL V+AE+ +Q QI L+DRQ++LYER+S+LK++LE +AS + +
Sbjct: 3 EEDNIQGELLLVQAELDDIQGQISALIDRQEELYERESQLKAMLEVSKASNNT---INNT 59
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQE----------------IINAVLS 105
S ++WSG+F WDSRADDVR NVFGI +YR NQ+E IINA++S
Sbjct: 60 PSVGPKDWSGSFLWDSRADDVRFNVFGISSYRQNQREVSFFILHPFKHIATFQIINAIMS 119
Query: 106 GRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTT 165
GRDVLVIMAAGGGKSLCYQLPAVL +GI LVVSPLLSLIQDQVM LAALGI A+ML STT
Sbjct: 120 GRDVLVIMAAGGGKSLCYQLPAVLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTT 179
Query: 166 SKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCS 225
+KE EKF+YKAL+KGEGELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLI+IDEAHCCS
Sbjct: 180 NKEVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCS 239
Query: 226 QWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPN 285
QWGHDFRPDYKNLGILK QFP VPM+ALTATAT KVQ DL+EMLHI +C+KFVSTINRPN
Sbjct: 240 QWGHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPN 299
Query: 286 LFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYY 345
LFY V EKS VGKVVIDEIA +I ESYPN+ESGIVYCFSRKECEQVA+EL +RGI ADYY
Sbjct: 300 LFYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYY 359
Query: 346 HADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD---------------------- 383
HADMD+ +REKVHMRWSK+KLQVIVGTVAFGMGINKPD
Sbjct: 360 HADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDDSELVLNQRQEDNLACQLLEKG 419
Query: 384 ---------VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYE 434
VRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+L++RP DVPRQSSMVFYE
Sbjct: 420 CRFRLGENIVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYRPGDVPRQSSMVFYE 479
Query: 435 NSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQCIISLLQDIQD 494
N GLQNLYDIVRY Q+ L + + +L++++ H + I+SLL DIQ
Sbjct: 480 NCGLQNLYDIVRYCQFLLVGMCDNCTSSL--ELKEID------ATHHTKIIVSLLHDIQL 531
Query: 495 NNQRLTMLQLVDKMKIKLKEIDS-----DLKREEIEQLVLQLIIDRVL------------ 537
N+QR T+LQLVDK K K K++ DLK+E IEQLV+QLI+DRVL
Sbjct: 532 NDQRATLLQLVDKFKAKWKDLGCSNESIDLKKEGIEQLVVQLILDRVLVYNSPSTATIET 591
Query: 538 -------------------------VRIGP-FSP---GKKIIKLEISSVQKNTADNKKST 568
V +GP + P G + +KL ++ ++ K T
Sbjct: 592 FIWSTSLVTLNKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRT 651
Query: 569 KRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKI 628
KR+ S+ LE +LD+LR+EL+S +GG+ PH+VLS+Q I L++ +KP+T+ E LEK+
Sbjct: 652 KRNQMSN-LEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAE-----LEKL 705
Query: 629 IGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKA-VVVVDSS 687
IGK+KTGKYGS I+E++ + E G A ASKR KK+K V+ V+SS
Sbjct: 706 IGKVKTGKYGSAIIELMLL-----------HIDSEVAGGKACASKRQKKDKEDVICVESS 754
Query: 688 DDSEV 692
++ +V
Sbjct: 755 EEEDV 759
>gi|242040001|ref|XP_002467395.1| hypothetical protein SORBIDRAFT_01g027020 [Sorghum bicolor]
gi|241921249|gb|EER94393.1| hypothetical protein SORBIDRAFT_01g027020 [Sorghum bicolor]
Length = 646
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/700 (61%), Positives = 507/700 (72%), Gaps = 105/700 (15%)
Query: 20 VQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVENWSGTFEWDSRA 79
+Q QIK+L+DRQ++LYERQS+LK+LLE + SR + S +E+WSG+F WDS+A
Sbjct: 21 IQGQIKRLLDRQEELYERQSQLKALLEVSKVSRN---KSNCKPSVTLEDWSGSFPWDSQA 77
Query: 80 DDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSP 139
DD RLN+FGI +YR+NQ+EIINAV+SGRDVLVIMAAGGGKSLCYQLPAVLR+GIALVVSP
Sbjct: 78 DDTRLNIFGITSYRSNQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSP 137
Query: 140 LLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKR 199
LLSLIQDQVM L ALGIPA+MLTSTT+KE EKFIY+AL+KGEGELK+LYVTPEKISKSKR
Sbjct: 138 LLSLIQDQVMGLTALGIPAYMLTSTTNKEVEKFIYRALDKGEGELKILYVTPEKISKSKR 197
Query: 200 FMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQ 259
FMSK+EKCHHAGRLSL+++DEAHCCSQWGHDFRPDYKNL ILK QFP VPM+ALTATAT
Sbjct: 198 FMSKVEKCHHAGRLSLVAVDEAHCCSQWGHDFRPDYKNLSILKIQFPTVPMIALTATATS 257
Query: 260 KVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGI 319
KVQ DL+EMLHI +C+KFVST+NRPNLFY V +KS VGKVVIDEI +I ESYPN+ESGI
Sbjct: 258 KVQTDLIEMLHIPRCVKFVSTVNRPNLFYKVYQKSPVGKVVIDEITNFITESYPNNESGI 317
Query: 320 VYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
VYCFSRKECEQVA+ELR RG+ A++YHADMDI AREK+HMRWSK + QVIVGTVAFGMGI
Sbjct: 318 VYCFSRKECEQVAKELRDRGVLAEHYHADMDIVAREKIHMRWSKGQSQVIVGTVAFGMGI 377
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
NKPDVRFVIHHSLSKS+ETYY QSSMVFYEN GLQ
Sbjct: 378 NKPDVRFVIHHSLSKSMETYY--------------------------QSSMVFYENCGLQ 411
Query: 440 NLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRL 499
NLYDIVRY Q H + ++SLL D+Q N+QR
Sbjct: 412 NLYDIVRYCQ-----------------------------ECHTKILVSLLHDLQLNDQRA 442
Query: 500 TMLQLVDKMKIKLKEIDS-----DLKREEIEQLVLQLIIDRVL--------------VRI 540
T+LQLVDK K+K K + DLKREEIEQL++QLI+DRVL V +
Sbjct: 443 TLLQLVDKFKVKWKGLGRSNQAVDLKREEIEQLIVQLIVDRVLKEEFQHTAYSTNAYVTL 502
Query: 541 GP-FSP---GKKIIKLEI----SSVQKNTADNKKSTKRSLTSSALEFELDELRKELASIS 592
GP + P G + +KLEI S + D K TKRS S LE +LDELR+EL+S S
Sbjct: 503 GPLWKPALEGNRPVKLEIAVLGSQARAGGGDISKGTKRSRMSD-LEAKLDELRRELSSSS 561
Query: 593 GG---ILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKYGSRILEVISKCG 649
G I PH+VLS+Q I L+S +KP+T E LEK+IGK+KT KYG+RI+E++
Sbjct: 562 TGAISIFPHAVLSTQQISLLSCQKPTTEAE-----LEKVIGKVKTEKYGNRIIELM---- 612
Query: 650 NSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDD 689
+ ++ G + A +R KK+K VV V+SSDD
Sbjct: 613 -------RSHIADPGAGNGSVAKRRPKKDKDVVCVESSDD 645
>gi|77552741|gb|ABA95538.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 556
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/525 (72%), Positives = 430/525 (81%), Gaps = 13/525 (2%)
Query: 2 ETEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS 61
E + I EL V+AE+ +Q QI L+DRQ++LYER+S+LK++LE +AS + +
Sbjct: 3 EEDNIQGELLLVQAELDDIQGQISALIDRQEELYERESQLKAMLEVSKASNNT---INNT 59
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
S ++WSG+F WDSRADDVR NVFGI +YR NQ+EIINA++SGRDVLVIMAAGGGKSL
Sbjct: 60 PSVGPKDWSGSFLWDSRADDVRFNVFGISSYRQNQREIINAIMSGRDVLVIMAAGGGKSL 119
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
CYQLPAVL +GI LVVSPLLSLIQDQVM LAALGI A+ML STT+KE EKF+YKAL+KGE
Sbjct: 120 CYQLPAVLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTTNKEVEKFVYKALDKGE 179
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
GELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLI+IDEAHCCSQWGHDFRPDYKNLGIL
Sbjct: 180 GELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 239
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
K QFP VPM+ALTATAT KVQ DL+EMLHI +C+KFVSTINRPNLFY V EKS VGKVVI
Sbjct: 240 KVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLFYKVFEKSPVGKVVI 299
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
DEIA +I ESYPN+ESGIVYCFSRKECEQVA+EL +RGI ADYYHADMD+ +REKVHMRW
Sbjct: 300 DEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYHADMDVISREKVHMRW 359
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
SK+KLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+L++RP
Sbjct: 360 SKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYRP 419
Query: 422 ADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC------- 474
DVPRQSSMVFYEN GLQNLYDIVRY Q E Q N C
Sbjct: 420 GDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAFFRHFGEAAQDCNGMCDNCTSSL 479
Query: 475 ---MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEID 516
+ H + I+SLL DIQ N+QR T+LQLVDK K K K+++
Sbjct: 480 ELKEIDATHHTKIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDLE 524
>gi|168029873|ref|XP_001767449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681345|gb|EDQ67773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 655
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/665 (57%), Positives = 489/665 (73%), Gaps = 43/665 (6%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSST 64
++ Q+L V+ E+ VQ+QI+ L+ Q+ L E+Q+EL+ L+ + + GG
Sbjct: 4 DLKQQLRLVDQELHQVQDQIQSLLQHQESLLEQQAELQQLIASCRYFACPTSKSGGV--- 60
Query: 65 AVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
NWSG+FEWD+RA D+RLN+FGI +YR NQ EIINAV+SGRDV+VIMAAGGGKSLCYQ
Sbjct: 61 ---NWSGSFEWDNRAADIRLNLFGIKSYRQNQHEIINAVMSGRDVIVIMAAGGGKSLCYQ 117
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPA+LR G ALV+SPLLSLIQDQVM L ALGI A MLTSTT+K++EK IYK+LEKGEG+L
Sbjct: 118 LPAMLRTGTALVISPLLSLIQDQVMGLTALGISASMLTSTTTKDEEKSIYKSLEKGEGDL 177
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K+LYVTPEK++KSKRF+SKLEKC+H GRLSLI+IDEAHCCSQWGHDFRPDYK LGILK Q
Sbjct: 178 KILYVTPEKVAKSKRFVSKLEKCNHGGRLSLIAIDEAHCCSQWGHDFRPDYKQLGILKKQ 237
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FP VPM+ALTATAT++VQ DL EML I +C KFVST+NRPNLFY VREK + G ID+I
Sbjct: 238 FPRVPMIALTATATERVQTDLREMLQITRCEKFVSTVNRPNLFYEVREKKANGSAAIDDI 297
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
A +I + Y ESGIVYCFSRKECEQVA ELR+RGISA +YHADM R VHMRWS N
Sbjct: 298 ASFILDKYSKKESGIVYCFSRKECEQVAAELRKRGISAAHYHADMKPETRSSVHMRWSTN 357
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
KLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLP+ CLL+FRPAD+
Sbjct: 358 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSLETYYQESGRAGRDGLPAHCLLYFRPADL 417
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF-----EKLQQVNLFC----- 474
PRQSSMVF E +GL NLY I R+ Q + + R F EK+Q+ N C
Sbjct: 418 PRQSSMVFAEMAGLHNLYAICRFCQ-----SKQACRRAAFFRHFGEKIQKCNGMCDNCAF 472
Query: 475 --MVV---LAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVL 529
VV + G + ++S++++ D Q+LT+LQLV++ + ++ DL ++++E++++
Sbjct: 473 TKEVVDTDVTGVSLSLVSMVKESNDVEQKLTILQLVEQWRNTDAQLAKDLSKDDVERVIV 532
Query: 530 QLIIDRVL---VRIGPFSPGKKI----IKLEI-----SSVQKNTADNKKSTKRSLTSSAL 577
QLI+D +L ++ + +KLEI S+ +K+ A+ ++ +T S L
Sbjct: 533 QLILDGILKEEFAHTAYATNAYVALGTVKLEIVKGAQSAKKKSKANTAPISEEGMTFSGL 592
Query: 578 EFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKY 637
LD+LR+ LA+ GGI PHSVL+SQ I L++++KP TMEE LE++IGK +Y
Sbjct: 593 GSALDDLRQNLAASHGGIFPHSVLTSQHISLLASQKPVTMEE-----LEEVIGKRIAEQY 647
Query: 638 GSRIL 642
G+ IL
Sbjct: 648 GNEIL 652
>gi|449516333|ref|XP_004165201.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 586
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/449 (79%), Positives = 404/449 (89%), Gaps = 1/449 (0%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
M EE+L+EL NVE ++ VQ +I L++RQD LY+R+SEL+SLLE + S + G
Sbjct: 1 MNPEEVLEELLNVEVQINEVQAEINLLLERQDNLYQRKSELQSLLELCNETEDS-VSQGT 59
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ST ENWSG+F+WDS ADDV+LN+FGI +YRANQ+EI+NAV+SGRDVLVIMAAGGGKS
Sbjct: 60 GTSTNSENWSGSFKWDSEADDVKLNIFGISSYRANQREIVNAVMSGRDVLVIMAAGGGKS 119
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+L +GIALVVSPLLSLIQDQVM LAALGI A MLTS TSKEDEK IYK LEKG
Sbjct: 120 LCYQLPALLYDGIALVVSPLLSLIQDQVMGLAALGISASMLTSATSKEDEKLIYKNLEKG 179
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
EG +K+LYVTPEK+SKSKRFMSKLEKC+HAGRLSLI+IDEAHCCSQWGHDFRPDYKNLGI
Sbjct: 180 EGSMKILYVTPEKVSKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGI 239
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LKTQFP+ P++ALTATATQ+VQNDL+EML I K +KFVST+NRPNLFYMVREKSSV KVV
Sbjct: 240 LKTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVV 299
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
ID+IA++IQESYPN+ESGI+YCFSRKECEQVA+ELR RGISAD+YHADMD AREKVHMR
Sbjct: 300 IDQIAEFIQESYPNNESGIIYCFSRKECEQVAKELRLRGISADHYHADMDSVAREKVHMR 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS ++LQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSECLL++R
Sbjct: 360 WSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYYR 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQ 449
P DVPRQSSMVFYENSGL+NLY IV+Y Q
Sbjct: 420 PGDVPRQSSMVFYENSGLENLYGIVQYCQ 448
>gi|108864717|gb|ABA95535.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 766
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/448 (79%), Positives = 397/448 (88%), Gaps = 3/448 (0%)
Query: 2 ETEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS 61
E + I EL V+AE+ +Q QI L+DRQ++LYER+S+LK++LE +AS + +
Sbjct: 3 EEDNIQGELLLVQAELDDIQGQISALIDRQEELYERESQLKAMLEVSKASNNT---INNT 59
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
S ++WSG+F WDSRADDVR NVFGI +YR NQ+EIINA++SGRDVLVIMAAGGGKSL
Sbjct: 60 PSVGPKDWSGSFLWDSRADDVRFNVFGISSYRQNQREIINAIMSGRDVLVIMAAGGGKSL 119
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
CYQLPAVL +GI LVVSPLLSLIQDQVM LAALGI A+ML STT+KE EKF+YKAL+KGE
Sbjct: 120 CYQLPAVLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTTNKEVEKFVYKALDKGE 179
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
GELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLI+IDEAHCCSQWGHDFRPDYKNLGIL
Sbjct: 180 GELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 239
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
K QFP VPM+ALTATAT KVQ DL+EMLHI +C+KFVSTINRPNLFY V EKS VGKVVI
Sbjct: 240 KVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLFYKVFEKSPVGKVVI 299
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
DEIA +I ESYPN+ESGIVYCFSRKECEQVA+EL +RGI ADYYHADMD+ +REKVHMRW
Sbjct: 300 DEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYHADMDVISREKVHMRW 359
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
SK+KLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+L++RP
Sbjct: 360 SKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYRP 419
Query: 422 ADVPRQSSMVFYENSGLQNLYDIVRYSQ 449
DVPRQSSMVFYEN GLQNLYDIVRY Q
Sbjct: 420 GDVPRQSSMVFYENCGLQNLYDIVRYCQ 447
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 147/242 (60%), Gaps = 41/242 (16%)
Query: 475 MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDS-----DLKREEIEQLVL 529
M H + I+SLL DIQ N+QR T+LQLVDK K K K++ DLK+E IEQLV+
Sbjct: 542 MTYCTDHTKIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDLGCSNESIDLKKEGIEQLVV 601
Query: 530 QLIIDRVL--------------VRIGP-FSP---GKKIIKLEISSVQKNTADNKKSTKRS 571
QLI+DRVL V +GP + P G + +KL ++ ++ K TKR+
Sbjct: 602 QLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRTKRN 661
Query: 572 LTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGK 631
S+ LE +LD+LR+EL+S +GG+ PH+VLS+Q I L++ +KP+T+ E LEK+IGK
Sbjct: 662 QMSN-LEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAE-----LEKLIGK 715
Query: 632 LKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKA-VVVVDSSDDS 690
+KTGKYGS I+E++ + E G A ASKR KK+K V+ V+SS++
Sbjct: 716 VKTGKYGSAIIELMLL-----------HIDSEVAGGKACASKRQKKDKEDVICVESSEEE 764
Query: 691 EV 692
+V
Sbjct: 765 DV 766
>gi|145324100|ref|NP_001077639.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
gi|332193226|gb|AEE31347.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
Length = 580
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/593 (64%), Positives = 458/593 (77%), Gaps = 43/593 (7%)
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
+LR G LVVSPLLSLIQDQVM LAALGI A+MLTST+ KE+EKF+YKALEKGE +LK+L
Sbjct: 1 MLRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKIL 60
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK+SKSKRFMSKLEKCH+AGRLSLISIDEAHCCSQWGHDFRPDYKNL ILKTQFP
Sbjct: 61 YVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPK 120
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VPM+ALTATATQKVQNDL+EMLHI KC+KFVS++NRPNLFY VREKS+VGK+V+DEIA++
Sbjct: 121 VPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEF 180
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+ESY N+ESGIVYCFSRKECEQ+A +LR+RGISADYYHADMD N REKVHMRWSKNKLQ
Sbjct: 181 IRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQ 240
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+LFFR ADVPRQ
Sbjct: 241 VIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVPRQ 300
Query: 428 SSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC----------MVV 477
SSMVFYE SGLQNLYDIVRY Q E Q N C V
Sbjct: 301 SSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEPSQDCNGMCDNCALSSEVKEVD 360
Query: 478 LAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQLIIDRVL 537
++ ++ ++S++Q+ Q +QR+TMLQL DK++ K K++ ++LKR+E+E LV++LI+D VL
Sbjct: 361 VSDLSKLVVSMVQETQAKDQRVTMLQLGDKLRNKHKDLIAELKRDEVEHLVIKLIVDSVL 420
Query: 538 --------------VRIGPFS----PGKKIIKLEISSVQKNTADNKKSTKRSLTSSALEF 579
V +GP + G+K IK+E SS Q K KRS+T S LE
Sbjct: 421 KEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSRQT------KKLKRSITFSGLEL 474
Query: 580 ELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKYGS 639
+LDELRKE+++ G ILPH+VLS+Q I IS++KP +++E LE IIGKLKT KYG
Sbjct: 475 KLDELRKEISAADGSILPHTVLSTQQIGSISSQKPVSLQE-----LESIIGKLKTEKYGD 529
Query: 640 RIL-EVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKAVVVVDSSDDSE 691
RIL EV+ SEQ ++ +KEE + +R KR K +K VV+V+SS + E
Sbjct: 530 RILEEVMRHEAVSEQLVEDP--TKEETCK-SRLRKRAKTQKDVVLVESSGEEE 579
>gi|108936937|dbj|BAE96002.1| RecQ-like helicase 2 [Oryza sativa Japonica Group]
Length = 768
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/451 (77%), Positives = 395/451 (87%), Gaps = 7/451 (1%)
Query: 2 ETEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS 61
E + I EL V+AE+ +Q QI L+DRQ++LYER+S+LK++LE +AS + +
Sbjct: 3 EEDNIQGELLLVQAELDDIQGQISALIDRQEELYERESQLKAMLEVSKASNNT---INNT 59
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFG---IPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
S ++WSG+F WDSRADDVR NVFG IPA + + +IINA++SGRDVLVIMAAGGG
Sbjct: 60 PSVGPKDWSGSFLWDSRADDVRFNVFGDFFIPA-ESKRGKIINAIMSGRDVLVIMAAGGG 118
Query: 119 KSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
KSLCYQLPAVL +GI LVVSPLLSLIQDQVM LAALGI A+ML STT+KE EKF+YKAL+
Sbjct: 119 KSLCYQLPAVLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTTNKEVEKFVYKALD 178
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
KGEGELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLI+IDEAHCCSQWGHDFRPDYKNL
Sbjct: 179 KGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNL 238
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
GILK QFP VPM+ALTATAT KVQ DL+EMLHI +C+KFVSTINRPNLFY V EKS VGK
Sbjct: 239 GILKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLFYKVFEKSPVGK 298
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
VVIDEIA +I ESYPN+ESGIVYCFSRKECEQVA+EL +RGI ADYYHADMD+ +REKVH
Sbjct: 299 VVIDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYHADMDVISREKVH 358
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
MRWSK+KLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQESGRAGRDGLPSEC+L+
Sbjct: 359 MRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILY 418
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRYSQ 449
+RP DVPRQSSMVFYEN GLQNLYDIVRY Q
Sbjct: 419 YRPGDVPRQSSMVFYENCGLQNLYDIVRYCQ 449
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 147/242 (60%), Gaps = 41/242 (16%)
Query: 475 MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDS-----DLKREEIEQLVL 529
M H + I+SLL DIQ N+QR T+LQLVDK K K K++ DLK+E IEQLV+
Sbjct: 544 MTYCTDHTKIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDLGCSNESIDLKKEGIEQLVV 603
Query: 530 QLIIDRVL--------------VRIGP-FSP---GKKIIKLEISSVQKNTADNKKSTKRS 571
QLI+DRVL V +GP + P G + +KL ++ ++ K TKR+
Sbjct: 604 QLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRTKRN 663
Query: 572 LTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGK 631
S+ LE +LD+LR+EL+S +GG+ PH+VLS+Q I L++ +KP+T+ E LEK+IGK
Sbjct: 664 QMSN-LEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAE-----LEKLIGK 717
Query: 632 LKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKA-VVVVDSSDDS 690
+KTGKYGS I+E++ + E G A ASKR KK+K V+ V+SS++
Sbjct: 718 VKTGKYGSAIIELMLL-----------HIDSEVAGGKACASKRQKKDKEDVICVESSEEE 766
Query: 691 EV 692
+V
Sbjct: 767 DV 768
>gi|302789379|ref|XP_002976458.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
gi|300156088|gb|EFJ22718.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
Length = 711
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/720 (51%), Positives = 490/720 (68%), Gaps = 65/720 (9%)
Query: 11 ENV--EAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
ENV E ++ QI L DRQ +L E Q+EL+ L++ AS IQ ++
Sbjct: 1 ENVLQERDLFAFTAQIAVLCDRQARLLEEQAELRQLIDCCRASEEDDIQ------IIEQD 54
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WSG FEWD+ A ++ LNVFGI YR NQ+EI+NA++S ++V+V+MAAGGGKSLCYQLPA+
Sbjct: 55 WSGNFEWDNEASNLLLNVFGISTYRRNQREIVNALMSNKNVVVVMAAGGGKSLCYQLPAL 114
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
LR GIALVVSPLLSLIQDQVM LAALG+ A MLTSTTSKE+EK IY+ LEKG+G L++LY
Sbjct: 115 LRPGIALVVSPLLSLIQDQVMGLAALGVSAAMLTSTTSKEEEKEIYRVLEKGDGNLRILY 174
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPEKI+KSKRFMSKLEKC+ AGRLSL++IDEAHCCSQWGHDFRPDYKNLGILK QFP V
Sbjct: 175 VTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKKQFPKV 234
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PM+ALTATAT +VQ DL EML I C +F S++NRPNLFY VR+K V VI++IA +I
Sbjct: 235 PMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVRDKKQVAADVIEDIALFI 294
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+E+YP++ESGIVYCFSRKECEQVA LR+R ISA +YHADMD R VH RWS N+LQV
Sbjct: 295 KETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHRRWSSNQLQV 354
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
IVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLPS C+LFFRPADVPRQS
Sbjct: 355 IVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLFFRPADVPRQS 414
Query: 429 SMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVV----------L 478
MVF EN+GLQNLY + RY Q E++Q+ N C +
Sbjct: 415 CMVFSENTGLQNLYAMARYCQSKQRCRRAAFFQYFAEQVQECNGMCDTCAFENDVVEKDV 474
Query: 479 AGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEI-----------------DSDLKR 521
+ + ++ + D+ +++++ T+LQLVD + +L++ D ++ +
Sbjct: 475 TEYGKSLVQSVMDVAESDKKTTLLQLVDLWRSQLRQAGNHISGVYGHILQSQTGDKEMSK 534
Query: 522 EEIEQLVLQLIIDRVLVR------------IGPFSPGKKIIKLEISSVQKNT----ADNK 565
++ EQ++LQLI+D L + + S + I++ E+ S ++ + +
Sbjct: 535 DDAEQIILQLILDGTLAKDFQHTAYATNAYVKAGSAARLILQGELPSCKRKVILEQCEKR 594
Query: 566 KSTKRSLTSSALEFE----LDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEAS 621
K +L A++ LD LR+ LA+ GGI P++VLSSQ I+ +S+ P+++ E
Sbjct: 595 GPVKTTLDDCAMQSGMARMLDTLRQTLAAADGGIFPYAVLSSQHIKRLSSHVPTSITE-- 652
Query: 622 SNHLEKIIGKLKTGKYGSRILEVISK--CGNSEQQHDNNAVSKEE---QGRDARASKRTK 676
L++IIGK K+ KYG +I+ +++ N++ A S + G AR +KR++
Sbjct: 653 ---LDEIIGKTKSSKYGEQIMTTLNEYTTKNTDGPDTKEASSSKRVATTGGQARQTKRSR 709
>gi|302811147|ref|XP_002987263.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
gi|300144898|gb|EFJ11578.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
Length = 711
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/720 (51%), Positives = 492/720 (68%), Gaps = 65/720 (9%)
Query: 11 ENV--EAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
ENV E ++ QI L DRQ +L E Q+EL+ L++ AS IQ ++
Sbjct: 1 ENVLQERDLFAFTAQIAVLCDRQARLLEEQAELRQLIDCCRASEEDDIQ------IIEQD 54
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WSG FEWD+ A ++ LNVFGI +R NQ+EI+NA++S ++V+V+MAAGGGKSLCYQLPA+
Sbjct: 55 WSGNFEWDNEASNLLLNVFGISTFRRNQREIVNALMSNKNVVVVMAAGGGKSLCYQLPAL 114
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
LR GIALVVSPLLSLIQDQVM LAALG+ A MLTSTTSKE+EK IY+ LEKG+G L++LY
Sbjct: 115 LRPGIALVVSPLLSLIQDQVMGLAALGVSAAMLTSTTSKEEEKEIYRVLEKGDGNLRILY 174
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPEKI+KSKRFMSKLEKC+ AGRLSL++IDEAHCCSQWGHDFRPDYKNLGILK QFP V
Sbjct: 175 VTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKKQFPKV 234
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PM+ALTATAT +VQ DL EML I C +F S++NRPNLFY VR+K V VI++IA +I
Sbjct: 235 PMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVRDKKQVAADVIEDIALFI 294
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+E+YP++ESGIVYCFSRKECEQVA LR+R ISA +YHADMD R VH RWS N+LQV
Sbjct: 295 KETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHRRWSSNQLQV 354
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
IVGTVAFGMGINKPDVRFVIHH+LSKS+ETYYQESGRAGRDGLPS C+L+FRPADVPRQS
Sbjct: 355 IVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLYFRPADVPRQS 414
Query: 429 SMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVV----------L 478
MVF EN+GLQNLY + RY Q E++Q+ N C +
Sbjct: 415 CMVFSENTGLQNLYAMARYCQSKQRCRRAAFFQYFAEQVQECNGMCDTCAFENDVVEKDV 474
Query: 479 AGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEI-----------------DSDLKR 521
+ + ++ + D+ +++++ T+LQLVD + +L++ D ++ +
Sbjct: 475 TEYGKSLVQSVMDVAESDKKTTLLQLVDLWRSQLRQAGNHMSGVYGHILQSQTGDKEMSK 534
Query: 522 EEIEQLVLQLIIDRVLVR------------IGPFSPGKKIIKLEISSVQKNT----ADNK 565
++ EQ++LQLI+D L + + S + I++ ++ S ++ + +
Sbjct: 535 DDAEQIILQLILDGTLAKDFQHTAYATNAYVKAGSAARLILQGDLPSCKRKVILEQCEKR 594
Query: 566 KSTKRSLTSSALEFE----LDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEAS 621
K +L A++ LD+LR+ LA+ GG+ P++VLSS+ I+ +S++ P+++ E
Sbjct: 595 GPVKTTLDDCAMQSGMARMLDKLRQTLAAADGGLFPYAVLSSEHIKRLSSQVPTSITE-- 652
Query: 622 SNHLEKIIGKLKTGKYGSRILEVISK--CGNSEQQHDNNAVSKEE---QGRDARASKRTK 676
L++IIGK K+ KYG +I+ +++ N++ A S + G AR +KR++
Sbjct: 653 ---LDEIIGKTKSSKYGEQIITALNEYTTKNTDDPDTKEASSSKRVATTGGQARQTKRSR 709
>gi|115486841|ref|NP_001068564.1| Os11g0708600 [Oryza sativa Japonica Group]
gi|113645786|dbj|BAF28927.1| Os11g0708600, partial [Oryza sativa Japonica Group]
Length = 685
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/363 (85%), Positives = 336/363 (92%), Gaps = 1/363 (0%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
F IPA + + +IINA++SGRDVLVIMAAGGGKSLCYQLPAVL +GI LVVSPLLSLIQD
Sbjct: 5 FFIPA-ESKRGKIINAIMSGRDVLVIMAAGGGKSLCYQLPAVLHDGITLVVSPLLSLIQD 63
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QVM LAALGI A+ML STT+KE EKF+YKAL+KGEGELK+LYVTPEKISKSKRFMSKLEK
Sbjct: 64 QVMGLAALGIQAYMLASTTNKEVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSKLEK 123
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
CHHAGRLSLI+IDEAHCCSQWGHDFRPDYKNLGILK QFP VPM+ALTATAT KVQ DL+
Sbjct: 124 CHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQIDLI 183
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
EMLHI +C+KFVSTINRPNLFY V EKS VGKVVIDEIA +I ESYPN+ESGIVYCFSRK
Sbjct: 184 EMLHIPRCVKFVSTINRPNLFYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCFSRK 243
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
ECEQVA+EL +RGI ADYYHADMD+ +REKVHMRWSK+KLQVIVGTVAFGMGINKPDVRF
Sbjct: 244 ECEQVAKELSERGILADYYHADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRF 303
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVR 446
VIHHSLSKS+ETYYQESGRAGRDGLPSEC+L++RP DVPRQSSMVFYEN GLQNLYDIVR
Sbjct: 304 VIHHSLSKSMETYYQESGRAGRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYDIVR 363
Query: 447 YSQ 449
Y Q
Sbjct: 364 YCQ 366
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 147/242 (60%), Gaps = 41/242 (16%)
Query: 475 MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDS-----DLKREEIEQLVL 529
M H + I+SLL DIQ N+QR T+LQLVDK K K K++ DLK+E IEQLV+
Sbjct: 461 MTYCTDHTKIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDLGCSNESIDLKKEGIEQLVV 520
Query: 530 QLIIDRVL--------------VRIGP-FSP---GKKIIKLEISSVQKNTADNKKSTKRS 571
QLI+DRVL V +GP + P G + +KL ++ ++ K TKR+
Sbjct: 521 QLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRTKRN 580
Query: 572 LTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGK 631
S+ LE +LD+LR+EL+S +GG+ PH+VLS+Q I L++ +KP+T+ E LEK+IGK
Sbjct: 581 QMSN-LEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAE-----LEKLIGK 634
Query: 632 LKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKA-VVVVDSSDDS 690
+KTGKYGS I+E++ + E G A ASKR KK+K V+ V+SS++
Sbjct: 635 VKTGKYGSAIIELMLL-----------HIDSEVAGGKACASKRQKKDKEDVICVESSEEE 683
Query: 691 EV 692
+V
Sbjct: 684 DV 685
>gi|108864716|gb|ABA95537.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|215701406|dbj|BAG92830.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 665
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/346 (86%), Positives = 324/346 (93%)
Query: 104 LSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTS 163
+SGRDVLVIMAAGGGKSLCYQLPAVL +GI LVVSPLLSLIQDQVM LAALGI A+ML S
Sbjct: 1 MSGRDVLVIMAAGGGKSLCYQLPAVLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLAS 60
Query: 164 TTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHC 223
TT+KE EKF+YKAL+KGEGELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLI+IDEAHC
Sbjct: 61 TTNKEVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHC 120
Query: 224 CSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINR 283
CSQWGHDFRPDYKNLGILK QFP VPM+ALTATAT KVQ DL+EMLHI +C+KFVSTINR
Sbjct: 121 CSQWGHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINR 180
Query: 284 PNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISAD 343
PNLFY V EKS VGKVVIDEIA +I ESYPN+ESGIVYCFSRKECEQVA+EL +RGI AD
Sbjct: 181 PNLFYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILAD 240
Query: 344 YYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQES 403
YYHADMD+ +REKVHMRWSK+KLQVIVGTVAFGMGINKPDVRFVIHHSLSKS+ETYYQES
Sbjct: 241 YYHADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQES 300
Query: 404 GRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQ 449
GRAGRDGLPSEC+L++RP DVPRQSSMVFYEN GLQNLYDIVRY Q
Sbjct: 301 GRAGRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYDIVRYCQ 346
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 147/242 (60%), Gaps = 41/242 (16%)
Query: 475 MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDS-----DLKREEIEQLVL 529
M H + I+SLL DIQ N+QR T+LQLVDK K K K++ DLK+E IEQLV+
Sbjct: 441 MTYCTDHTKIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDLGCSNESIDLKKEGIEQLVV 500
Query: 530 QLIIDRVL--------------VRIGP-FSP---GKKIIKLEISSVQKNTADNKKSTKRS 571
QLI+DRVL V +GP + P G + +KL ++ ++ K TKR+
Sbjct: 501 QLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGSGSKRTKRN 560
Query: 572 LTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGK 631
S+ LE +LD+LR+EL+S +GG+ PH+VLS+Q I L++ +KP+T+ E LEK+IGK
Sbjct: 561 QMSN-LEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAE-----LEKLIGK 614
Query: 632 LKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARASKRTKKEKA-VVVVDSSDDS 690
+KTGKYGS I+E++ + E G A ASKR KK+K V+ V+SS++
Sbjct: 615 VKTGKYGSAIIELMLL-----------HIDSEVAGGKACASKRQKKDKEDVICVESSEEE 663
Query: 691 EV 692
+V
Sbjct: 664 DV 665
>gi|414868215|tpg|DAA46772.1| TPA: hypothetical protein ZEAMMB73_430838, partial [Zea mays]
Length = 368
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/369 (76%), Positives = 326/369 (88%), Gaps = 4/369 (1%)
Query: 1 METEEILQ-ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYG 59
ME EE ++ EL VE+++ +Q QIK L+DRQ++LYERQ++LK+LLEA + +R + I
Sbjct: 1 MEDEENIEGELLLVESQLHDIQGQIKTLLDRQEELYERQAQLKALLEASKLTRNTTIN-- 58
Query: 60 GSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
+SS A E+WSG+F WD ADD R N+FGI +YR+NQ+EIINAV+SGRDVLVIMAAGGGK
Sbjct: 59 -TSSVAPEDWSGSFPWDLEADDTRFNIFGISSYRSNQREIINAVMSGRDVLVIMAAGGGK 117
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SLCYQLPAVLR+GIALVVSPLLSLIQDQVM L+ALGIPA+MLTSTT+KE EKFIYK L+K
Sbjct: 118 SLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLSALGIPAYMLTSTTNKEVEKFIYKTLDK 177
Query: 180 GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
GEGELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLI+IDEAHCCSQWGHDFRPDYKNLG
Sbjct: 178 GEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLG 237
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
ILK QFP VPM+ALTATAT KVQ DLMEMLHI +CIKFVST+NRPNLFY V EKS VGKV
Sbjct: 238 ILKIQFPSVPMIALTATATSKVQMDLMEMLHIPRCIKFVSTVNRPNLFYKVSEKSPVGKV 297
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHM 359
VIDEI K+I ESYPN+ESGI+YCFSRKECEQVA+ELR+RGISADYYHADMDI REK+HM
Sbjct: 298 VIDEITKFISESYPNNESGIIYCFSRKECEQVAKELRERGISADYYHADMDIVNREKIHM 357
Query: 360 RWSKNKLQV 368
R++ N L +
Sbjct: 358 RYAHNFLSL 366
>gi|45383374|ref|NP_989724.1| ATP-dependent DNA helicase Q1 [Gallus gallus]
gi|23503565|dbj|BAC20377.1| RECQL1 protein [Gallus gallus]
Length = 661
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/582 (44%), Positives = 375/582 (64%), Gaps = 38/582 (6%)
Query: 1 METEEILQE-LENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYG 59
M E+L+E L ++E E++ V+ QI++L+D+Q +L ++++ LK +++ + G
Sbjct: 1 MTAVEVLEEELLSIENELQAVEMQIQELLDKQQELIQKKTMLKKMIKQSSGESAA----G 56
Query: 60 GS--SSTAVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAG 116
GS + T+VE W+ T F W + N F + +R+ Q E +NA ++G+D+ ++M G
Sbjct: 57 GSKETETSVEAWNRTDFPWYEKIKTALQNKFKLQKFRSLQLETVNATMAGKDIFLVMPTG 116
Query: 117 GGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKA 176
GGKSLCYQLPAV +G LV+ PL+SL++DQ+M L LGI A +L +++SKE K+++
Sbjct: 117 GGKSLCYQLPAVCSDGFTLVICPLISLMEDQLMVLDQLGISATLLNASSSKEHVKWVHAQ 176
Query: 177 LEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236
+ +LK+LYVTPEKI+KSK FMSKLEK + AG L+ I++DE HCCSQWGHDFRPDYK
Sbjct: 177 MLDRNSQLKLLYVTPEKIAKSKMFMSKLEKAYQAGCLARIAVDEVHCCSQWGHDFRPDYK 236
Query: 237 NLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSV 296
+LGILK QFP P++ LTATAT V D +LHI+KCI F ++ NRPNL+Y VR K S
Sbjct: 237 SLGILKRQFPCAPLIGLTATATNHVLKDAQNILHIQKCITFTASFNRPNLYYEVRHKPSN 296
Query: 297 GKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREK 356
+ I++I K I Y SGIVYCFS+K+ EQV L++ GI A YHA+MD + K
Sbjct: 297 NEDFIEDIVKLINGRY-KGLSGIVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTK 355
Query: 357 VHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECL 416
VH W+ N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+
Sbjct: 356 VHKGWAANQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCI 415
Query: 417 LFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQ--- 469
L++ D+ R SSMV EN G + LYD+V Y Q N+ K R V+ F+++ +
Sbjct: 416 LYYGFGDIFRISSMVVMENVGQEKLYDMVSYCQ-----NMNKCRRVLIACHFDEVWESAN 470
Query: 470 VNLFCMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLK 513
N C + G+ + +I +L+ + +++LT L+L+D K+++
Sbjct: 471 CNRMCDNCCRENSLEKKDITGYCRDLIKILEQADNMSEKLTPLKLIDAWSGKGLSKLRVA 530
Query: 514 EID-SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E+ L REE+E+++ L++ + L F+ I L+I
Sbjct: 531 EVTPPKLPREELERIIAHLLLQQYLREDFSFTAFATISYLKI 572
>gi|449274903|gb|EMC83940.1| ATP-dependent DNA helicase Q1, partial [Columba livia]
Length = 656
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/577 (44%), Positives = 375/577 (64%), Gaps = 38/577 (6%)
Query: 6 ILQE-LENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS--S 62
+L+E L ++E E++ V+ QI++LVD+Q +L E++ +KSL++ S G ++ GS +
Sbjct: 1 VLEEVLASIEHELQAVEMQIQELVDKQQELIEKKMRVKSLIKQ---SSGD-VEASGSKET 56
Query: 63 STAVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
T+ E W+ F W + F + +R+ Q E +NA ++G+D+ ++M GGGKSL
Sbjct: 57 ETSAEAWNKKDFPWYEKIKTALQGKFKLQKFRSLQLETVNAAMAGKDIFLVMPTGGGKSL 116
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
CYQLPAV +G LV+ PL+SL++DQ+M L LGI A +L +++SKE K+++ +
Sbjct: 117 CYQLPAVCSDGFTLVICPLISLMEDQLMVLEQLGISAALLNASSSKEHVKWVHTEMLNRN 176
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
+LK++YVTPEKI+KSK FMSKLEK + AGRL+ I++DE HCCSQWGHDFRPDYK+LGIL
Sbjct: 177 SQLKLVYVTPEKIAKSKMFMSKLEKAYQAGRLARIAVDEVHCCSQWGHDFRPDYKSLGIL 236
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
K QFP+ P++ LTATAT V D ++LH++KCI F ++ NRPNL+Y VR K S + I
Sbjct: 237 KRQFPNAPLIGLTATATNHVLKDAQKILHVQKCITFTASFNRPNLYYEVRHKPSNNEDFI 296
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
++I K I Y SGIVYCFS+K+ EQV L++ GI A YHA+MD + KVH W
Sbjct: 297 EDIVKTINGRY-KGLSGIVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTKVHKGW 355
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
+ N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++
Sbjct: 356 AANQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYGF 415
Query: 422 ADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFC 474
D+ R SSMV EN G + LYD+V Y Q N+ K R V+ F+++ N C
Sbjct: 416 GDIFRISSMVVMENVGQEKLYDMVSYCQ-----NMNKCRRVLIARHFDEVWDSANCNRMC 470
Query: 475 ----------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEID-S 517
+ + G+ + +I +L+ ++ +++LT L+L+D K+++ E+
Sbjct: 471 DNCCRENSCEKMDITGYCRDLIKILEQAENMSEKLTPLKLIDAWSGKGVSKLRVAEVTPP 530
Query: 518 DLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
REE+E+++ L++ + L F+ I L+I
Sbjct: 531 KHPREELERIIAHLLLQQYLKEDFSFTAFATIFYLKI 567
>gi|326912433|ref|XP_003202555.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Meleagris gallopavo]
Length = 661
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/582 (43%), Positives = 374/582 (64%), Gaps = 38/582 (6%)
Query: 1 METEEILQ-ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYG 59
M E+L+ EL ++E E++ V+ QI++L+D+Q +L +++ LK L++ + G
Sbjct: 1 MTAVEVLEDELLSIENELQAVEMQIQELLDKQQELIQKKMTLKKLIKQSSGESAA----G 56
Query: 60 GS--SSTAVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAG 116
GS + T+VE W+ T F W + N F + +R+ Q E +NA ++G+D+ ++M G
Sbjct: 57 GSKETETSVEAWNKTDFPWYEKIKTALQNKFKLQKFRSLQLETVNATMAGKDIFLVMPTG 116
Query: 117 GGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKA 176
GGKSLCYQLPAV +G LV+ PL+SL++DQ+M L LGI A +L +++SKE K+++
Sbjct: 117 GGKSLCYQLPAVCSDGFTLVICPLISLMEDQLMVLEQLGISATLLNASSSKEHVKWVHTQ 176
Query: 177 LEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236
+ +LK+LYVTPEKI+KSK FMSKLEK + AG L+ I++DE HCCSQWGHDFRPDYK
Sbjct: 177 MLDRNSQLKLLYVTPEKIAKSKMFMSKLEKAYQAGCLARIAVDEVHCCSQWGHDFRPDYK 236
Query: 237 NLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSV 296
+LGILK QFP P++ LTATAT V D +LH++KCI F ++ NRPNL+Y VR K S
Sbjct: 237 SLGILKRQFPLAPLIGLTATATNHVLKDAQNILHVQKCITFTASFNRPNLYYEVRHKPSN 296
Query: 297 GKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREK 356
+ I++I K I Y SGIVYCFS+K+ EQV L++ GI A YHA+MD + K
Sbjct: 297 NEDFIEDIVKIINGRY-KGLSGIVYCFSQKDSEQVTISLQKLGIKAGTYHANMDAKYKTK 355
Query: 357 VHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECL 416
VH W+ N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+
Sbjct: 356 VHKGWAANQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCI 415
Query: 417 LFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQ--- 469
L++ D+ R SSMV EN G + LYD+V Y Q N+ K R V+ F+++ +
Sbjct: 416 LYYGFGDIFRISSMVVMENVGQEKLYDMVSYCQ-----NMNKCRRVLIARHFDEVWESAN 470
Query: 470 VNLFCMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLK 513
N C + + + +I +L+ ++ +++LT L+L+D K+++
Sbjct: 471 CNRMCDNCCRENSLEQKDITEYCRDLIKILEQAENMSEKLTPLKLIDAWSGKGLSKLRVA 530
Query: 514 EID-SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E+ L REE+E+++ L++ + L F+ I L+I
Sbjct: 531 EVTPPKLPREELERIIAHLLLQQYLREDFSFTAFATISYLKI 572
>gi|414868214|tpg|DAA46771.1| TPA: hypothetical protein ZEAMMB73_430838 [Zea mays]
Length = 265
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/259 (87%), Positives = 243/259 (93%), Gaps = 1/259 (0%)
Query: 104 LSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTS 163
+SGRDVLVIMAAGGGKSLCYQLPAVLR+GIALVVSPLLSLIQDQVM L+ALGIPA+MLTS
Sbjct: 1 MSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLSALGIPAYMLTS 60
Query: 164 TTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHC 223
TT+KE EKFIYK L+KGEGELK+LYVTPEKISKSKRFMSKLEKCHHAGRLSLI+IDEAHC
Sbjct: 61 TTNKEVEKFIYKTLDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHC 120
Query: 224 CSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINR 283
CSQWGHDFRPDYKNLGILK QFP VPM+ALTATAT KVQ DLMEMLHI +CIKFVST+NR
Sbjct: 121 CSQWGHDFRPDYKNLGILKIQFPSVPMIALTATATSKVQMDLMEMLHIPRCIKFVSTVNR 180
Query: 284 PNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISAD 343
PNLFY V EKS VGKVVIDEI K+I ESYPN+ESGI+YCFSRKECEQVA+ELR+RGISAD
Sbjct: 181 PNLFYKVSEKSPVGKVVIDEITKFISESYPNNESGIIYCFSRKECEQVAKELRERGISAD 240
Query: 344 YYHADMDINAREKVHMR-W 361
YYHADMDI REK+HMR W
Sbjct: 241 YYHADMDIVNREKIHMRQW 259
>gi|224095634|ref|XP_002200254.1| PREDICTED: ATP-dependent DNA helicase Q1 [Taeniopygia guttata]
Length = 661
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/578 (43%), Positives = 370/578 (64%), Gaps = 40/578 (6%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS-- 61
EE+L +EN E++ V+ QI++LVD+Q +L +++ +K+L++ S G ++ GGS
Sbjct: 8 EEVLVSIEN---ELQAVEMQIQELVDKQQELLQKKMRVKNLIKQ---SSGD-LEAGGSKD 60
Query: 62 SSTAVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ T+ E W+ F W + + F + +R+ Q E +NA ++G+D+ ++M GGGKS
Sbjct: 61 TETSAEEWNKKDFPWYEKIKAALQSRFKLQKFRSLQLETVNAAMAGKDIFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPAV +G LV+ PL+SL++DQ+M L LGI A +L +++SKE K+++ + K
Sbjct: 121 LCYQLPAVCSDGFTLVICPLISLMEDQLMVLEQLGISAALLNASSSKEHVKWVHTEMLKR 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+LK++YVTPEKI+KSK FMSKLEK + AG L+ I++DE HCCSQWGHDFRPDYK+LGI
Sbjct: 181 NSQLKLIYVTPEKIAKSKMFMSKLEKAYQAGCLARIAVDEVHCCSQWGHDFRPDYKSLGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ P++ LTATAT V D +LH+ KCI F ++ NRPNL+Y VR K S +
Sbjct: 241 LKRQFPNTPLIGLTATATNHVLKDAQNILHVHKCITFTASFNRPNLYYEVRHKPSNNEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y SGIVYCFS+K+ EQV L++ GI A YHA+MD + KVH
Sbjct: 301 IEDIVKTINGRY-KGMSGIVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTKVHKG 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W+ N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++
Sbjct: 360 WATNQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G + LYD+V Y Q N+ K R V+ F+++ N
Sbjct: 420 FGDIFRISSMVVMENVGQEKLYDMVSYCQ-----NMNKCRRVLIAHHFDEVWDSANCNRM 474
Query: 474 C----------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEID- 516
C + + G+ +I +L+ +++LT L+L+D K ++ E+
Sbjct: 475 CDNCCREKECEKMDVTGYCSDLIKILEQADSMSEKLTPLKLIDAWSGKGVSKFRVPEVTP 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
REE+E+++ L++ + L F+ I L++
Sbjct: 535 PKHTREELERIIAHLLLQQYLKEDFSFTAFATISYLKV 572
>gi|334348257|ref|XP_001365384.2| PREDICTED: ATP-dependent DNA helicase Q1 [Monodelphis domestica]
Length = 655
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/621 (41%), Positives = 382/621 (61%), Gaps = 52/621 (8%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSS-- 62
E+ +EL++V +E++ V+ QI++L++RQ +L ++++ LK ++ G+ G SS
Sbjct: 6 ELSEELDSVTSELQAVEIQIQELLERQQELIQKKTALKKRIKQSLEDPGA----GASSEF 61
Query: 63 STAVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
++ E+W+ F W + D NVF + +R Q E IN ++G++V ++M GGGKSL
Sbjct: 62 DSSPESWNKQDFPWSEKVKDAMQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSL 121
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
CYQLPAV +G LV+ PL+SL++DQ+M L LG+ A +L ++++KE K+++ +
Sbjct: 122 CYQLPAVCSDGFTLVICPLISLMEDQLMVLEQLGVSATLLNASSTKEHVKWVHAEMVNKN 181
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
+LK++YVTPEKI+KSK FMS+LEK + AGR + I++DE HCCSQWGHDFRPDYK LGIL
Sbjct: 182 SKLKLIYVTPEKIAKSKMFMSRLEKAYEAGRFTRIAVDEVHCCSQWGHDFRPDYKALGIL 241
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
K QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S + I
Sbjct: 242 KRQFPNTSLIGLTATATNHVLKDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFI 301
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
+++ K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH W
Sbjct: 302 EDVVKLINGRY-KGQSGIIYCFSQKDSEQVTISLQKLGIQAGAYHANMEPKDKTKVHKNW 360
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
S NK+QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD L ++C+L+
Sbjct: 361 SANKIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDLKADCILYSGF 420
Query: 422 ADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV-RLVIFEKLQQV------NLFC 474
D+ R SSMV EN G Q LY++V Y NI K R++I + +V N C
Sbjct: 421 GDIFRISSMVVMENVGQQKLYEMVSYCH-----NIHKCRRMLIAQHFDEVWNSAACNKMC 475
Query: 475 MVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLKEID---S 517
+ H Q +I +L+ + N++LT L+L+D K KL+ D
Sbjct: 476 DNCCKDISFEKKNVTDHCQDLIKILKQAEKLNEKLTPLKLIDAWLGKGPAKLRVSDVVPP 535
Query: 518 DLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEIS---------------SVQKNTA 562
L R+E+E+++ I+ + L F+ I L++ V+KNT
Sbjct: 536 KLPRDELEKIIAHFILQQYLKEDFSFTAYATISYLKVGPKAHLLNNEEHIITMKVKKNTK 595
Query: 563 DNKKSTKRSLTSSALEFELDE 583
+ K +++S E +++E
Sbjct: 596 GSSKVESSQVSNSEAERKMEE 616
>gi|301787243|ref|XP_002929036.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Ailuropoda
melanoleuca]
Length = 661
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/576 (43%), Positives = 363/576 (63%), Gaps = 35/576 (6%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-EAFEASRGSPIQYGGSSS 63
++ +EL++V E+ V QI++L++RQ +L ++++ L S + + EAS SS
Sbjct: 21 DLTEELDSVTNELHAVDVQIQELLERQQELIQKKNTLTSRIKQHLEASDAGESSEWDSSP 80
Query: 64 TAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
A WS F W + DV VF + +R Q E IN +SG+DV ++M GGGKSLC
Sbjct: 81 GA---WSKEDFPWSGKVKDVLQTVFKLQRFRLLQLETINVTMSGKDVFLVMPTGGGKSLC 137
Query: 123 YQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEG 182
YQLPA+ +G LV+ PL+SL++DQ+M L LGI A L +++SKE K+++ +
Sbjct: 138 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATTLNASSSKEHVKWVHAEMVNKSS 197
Query: 183 ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
+LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCS WGHDFRPDYK LGILK
Sbjct: 198 KLKLIYVTPEKIAKSKMFMSRLEKAYEAKRFTRIAVDEVHCCSHWGHDFRPDYKALGILK 257
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
QFP+ +M LTATAT V D ++L + KC F ++ NRPNL+Y +R+K S + I+
Sbjct: 258 RQFPNTALMGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEIRQKPSNTEDFIE 317
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWS 362
+I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + VH RWS
Sbjct: 318 DIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTNVHRRWS 376
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 377 ANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAGRDDMKADCILYYGFG 436
Query: 423 DVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCM 475
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 437 DIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNSEACNRMCD 491
Query: 476 VV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-DSD 518
+A H + +I +L+ +D N++LT L+L+D K+++ +
Sbjct: 492 NCCKDIACERKNVAAHCRDLIKILKQAEDLNEKLTPLKLIDSWMGRGAAKLRVAGVAPPK 551
Query: 519 LKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ L++ + L F+ I L+I
Sbjct: 552 LPREDLEKMIAHLLLQQYLKEDYSFTAYATISYLKI 587
>gi|58865766|ref|NP_001012098.1| ATP-dependent DNA helicase Q1 [Rattus norvegicus]
gi|81910891|sp|Q6AYJ1.1|RECQ1_RAT RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|50925619|gb|AAH79026.1| RecQ protein-like (DNA helicase Q1-like) [Rattus norvegicus]
gi|149049049|gb|EDM01503.1| rCG29929, isoform CRA_c [Rattus norvegicus]
Length = 621
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/620 (41%), Positives = 382/620 (61%), Gaps = 44/620 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ ELE+V +E+ V QI++L +RQ +L +R+S L ++ + S + G T+
Sbjct: 7 LTDELESVSSELHAVDIQIQELTERQHELLQRKSVLTKRIK--QCLEDSAAEASGDCDTS 64
Query: 66 VENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
WS F W + V +VF + +R Q E +NA ++ +D+ ++M GGGKSLCYQ
Sbjct: 65 PAAWSKEDFPWSGKVKHVLRDVFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQ 124
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPA+ +G LV+ PL+SL++DQ+M L LGI A ML S++SKE K ++ + L
Sbjct: 125 LPALCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNSSSSKEHVKCVHTEMMNKNSHL 184
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K++YVTPEKI+KSK FMS+LEK + AGRL+ +++DE HCCSQWGHDFRPDYK LGILK Q
Sbjct: 185 KLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQ 244
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FP++ ++ LTATAT V D ++L + KC+ F ++ NRPNL+Y VR+K S + I+ I
Sbjct: 245 FPNISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPSSAEDFIENI 304
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
A I Y +SGI+YCFS+K+ EQV L++ G+ A YHA+M+ R KVH +WS N
Sbjct: 305 ANLINGRY-KGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHANMEPEDRTKVHTQWSAN 363
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 364 ELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDWRADCILYYGFGDI 423
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV-RLVIFEKLQQV------NLFCMVV 477
R SSMV EN G Q LY++V Y Q NI K R +I + +V N C
Sbjct: 424 FRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRALIAQHFDEVWNADACNKMCDNC 478
Query: 478 ----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD--------KMKIKLKEIDSDL 519
+ H Q +I +L+ + N++LT L+L+D K ++ + + L
Sbjct: 479 CKDDSFEKKNITEHCQALIKILKQAEGLNEKLTPLKLIDAWMGKGAAKFRVAGVAVPA-L 537
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI---SSVQKN-----TADNKKSTKRS 571
RE++E++++ ++ + L F+ I L++ +S+ N T K+ST+ S
Sbjct: 538 PREDLEKIIVHALLQQYLKEDYSFTAYATISYLKVGPRASLLSNEGHAVTMQVKRSTQSS 597
Query: 572 LTSSALE-FELDELRKELAS 590
+ +++ E E+D KE +S
Sbjct: 598 VRAASPEACEVDSKGKEKSS 617
>gi|149049048|gb|EDM01502.1| rCG29929, isoform CRA_b [Rattus norvegicus]
Length = 645
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/620 (41%), Positives = 382/620 (61%), Gaps = 44/620 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ ELE+V +E+ V QI++L +RQ +L +R+S L ++ + S + G T+
Sbjct: 7 LTDELESVSSELHAVDIQIQELTERQHELLQRKSVLTKRIK--QCLEDSAAEASGDCDTS 64
Query: 66 VENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
WS F W + V +VF + +R Q E +NA ++ +D+ ++M GGGKSLCYQ
Sbjct: 65 PAAWSKEDFPWSGKVKHVLRDVFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQ 124
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPA+ +G LV+ PL+SL++DQ+M L LGI A ML S++SKE K ++ + L
Sbjct: 125 LPALCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNSSSSKEHVKCVHTEMMNKNSHL 184
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K++YVTPEKI+KSK FMS+LEK + AGRL+ +++DE HCCSQWGHDFRPDYK LGILK Q
Sbjct: 185 KLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQ 244
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FP++ ++ LTATAT V D ++L + KC+ F ++ NRPNL+Y VR+K S + I+ I
Sbjct: 245 FPNISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPSSAEDFIENI 304
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
A I Y +SGI+YCFS+K+ EQV L++ G+ A YHA+M+ R KVH +WS N
Sbjct: 305 ANLINGRY-KGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHANMEPEDRTKVHTQWSAN 363
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 364 ELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDWRADCILYYGFGDI 423
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV-RLVIFEKLQQV------NLFCMVV 477
R SSMV EN G Q LY++V Y Q NI K R +I + +V N C
Sbjct: 424 FRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRALIAQHFDEVWNADACNKMCDNC 478
Query: 478 ----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD--------KMKIKLKEIDSDL 519
+ H Q +I +L+ + N++LT L+L+D K ++ + + L
Sbjct: 479 CKDDSFEKKNITEHCQALIKILKQAEGLNEKLTPLKLIDAWMGKGAAKFRVAGVAVPA-L 537
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI---SSVQKN-----TADNKKSTKRS 571
RE++E++++ ++ + L F+ I L++ +S+ N T K+ST+ S
Sbjct: 538 PREDLEKIIVHALLQQYLKEDYSFTAYATISYLKVGPRASLLSNEGHAVTMQVKRSTQSS 597
Query: 572 LTSSALE-FELDELRKELAS 590
+ +++ E E+D KE +S
Sbjct: 598 VRAASPEACEVDSKGKEKSS 617
>gi|57106919|ref|XP_543768.1| PREDICTED: ATP-dependent DNA helicase Q1 [Canis lupus familiaris]
Length = 646
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/577 (42%), Positives = 365/577 (63%), Gaps = 39/577 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQS----ELKSLLEAFEASRGSPIQYGGS 61
+ +EL+++ E+ V QI++L++RQ +L ++++ +K LEA + S
Sbjct: 7 LTEELDSITNELHAVDIQIQELLERQQELIQKKNILTNRIKQHLEASDVGESSE----SD 62
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
SS A N F W S+ DV N+F + +R Q E IN +SG+DV ++M GGGKSL
Sbjct: 63 SSPAAWN-KEDFPWSSKVKDVLQNIFKLQRFRLLQLETINVTMSGKDVFLVMPTGGGKSL 121
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
CYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 122 CYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMINKN 181
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
+LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCS WGHDFRPDYK LGIL
Sbjct: 182 SKLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSHWGHDFRPDYKALGIL 241
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
K QFP+ +M LTATAT V D ++L + KC F ++ NRPNL+Y +R+K S + VI
Sbjct: 242 KRQFPNTALMGLTATATSHVLKDAQKILCVGKCFTFTASFNRPNLYYEIRQKPSNTEDVI 301
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
++I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + +VH RW
Sbjct: 302 EDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTRVHRRW 360
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
S N++QV+V TVAFGMGI+KPDVRF+IHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 361 SANEIQVVVATVAFGMGIDKPDVRFIIHHSMSKSIENYYQESGRAGRDDMKADCILYYGF 420
Query: 422 ADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFC 474
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 421 GDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNAEACNRMC 475
Query: 475 MVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-DS 517
+ H + ++ +L+ +D N++LT L+L+D K+++ +
Sbjct: 476 DNCCKDISCERKNVTAHCRDLVKILKQAEDLNEKLTPLKLIDSWMGKGAAKLRVAGVAPP 535
Query: 518 DLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ L++ + L F+ I L+I
Sbjct: 536 KLPREDLEKIIAHLLLQQYLKEDYSFTAYATISYLKI 572
>gi|281340169|gb|EFB15753.1| hypothetical protein PANDA_019119 [Ailuropoda melanoleuca]
Length = 640
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/575 (43%), Positives = 362/575 (62%), Gaps = 35/575 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-EAFEASRGSPIQYGGSSST 64
+ +EL++V E+ V QI++L++RQ +L ++++ L S + + EAS SS
Sbjct: 1 LTEELDSVTNELHAVDVQIQELLERQQELIQKKNTLTSRIKQHLEASDAGESSEWDSSPG 60
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A WS F W + DV VF + +R Q E IN +SG+DV ++M GGGKSLCY
Sbjct: 61 A---WSKEDFPWSGKVKDVLQTVFKLQRFRLLQLETINVTMSGKDVFLVMPTGGGKSLCY 117
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A L +++SKE K+++ + +
Sbjct: 118 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATTLNASSSKEHVKWVHAEMVNKSSK 177
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCS WGHDFRPDYK LGILK
Sbjct: 178 LKLIYVTPEKIAKSKMFMSRLEKAYEAKRFTRIAVDEVHCCSHWGHDFRPDYKALGILKR 237
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ +M LTATAT V D ++L + KC F ++ NRPNL+Y +R+K S + I++
Sbjct: 238 QFPNTALMGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEIRQKPSNTEDFIED 297
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + VH RWS
Sbjct: 298 IVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTNVHRRWSA 356
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 357 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAGRDDMKADCILYYGFGD 416
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMV 476
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 417 IFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNSEACNRMCDN 471
Query: 477 V----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-DSDL 519
+A H + +I +L+ +D N++LT L+L+D K+++ + L
Sbjct: 472 CCKDIACERKNVAAHCRDLIKILKQAEDLNEKLTPLKLIDSWMGRGAAKLRVAGVAPPKL 531
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ L++ + L F+ I L+I
Sbjct: 532 PREDLEKMIAHLLLQQYLKEDYSFTAYATISYLKI 566
>gi|327291741|ref|XP_003230579.1| PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Anolis
carolinensis]
Length = 451
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/449 (50%), Positives = 315/449 (70%), Gaps = 10/449 (2%)
Query: 3 TEEILQE-LENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS 61
T +LQE L +V++E++ V+ Q+++L++RQ L +++S L ++ F S + G S
Sbjct: 4 TLSVLQEELSSVDSELQAVEIQVQELLERQQDLLQKKSVLTKKIKQF-----SDTESGSS 58
Query: 62 SST--AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
T A E+W+ F W + +V N F +P +R Q E IN ++GRDV ++M GGG
Sbjct: 59 KDTESAAEDWNKEDFPWSKKVREVLRNSFKLPKFRPLQLETINVTMAGRDVFLVMPTGGG 118
Query: 119 KSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
KSLCYQLPAV +G LV+ PL+SL++DQ+M L L + A +L +++SKE K++Y +
Sbjct: 119 KSLCYQLPAVCSDGFTLVICPLVSLMEDQLMVLEQLKVSATLLNASSSKEHVKWVYTEML 178
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
+LK++YVTPEKI+KSK F+SKLEK + AGRL+ I++DE HCCSQWGHDFRPDYK L
Sbjct: 179 SSSSQLKLIYVTPEKIAKSKMFVSKLEKAYQAGRLTHIAVDEVHCCSQWGHDFRPDYKLL 238
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
GILK QFP+ ++ LTATAT V +D ++L I+KCI F ++ NRPNL+Y VR+KS V +
Sbjct: 239 GILKRQFPNASLIGLTATATSHVLHDAQKILCIQKCITFTASFNRPNLYYEVRQKSPVAQ 298
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
I++I K I Y SGI+YCFS+K+ EQV L+Q GI A YHA+M+ + +VH
Sbjct: 299 NFIEDIVKLINRRY-KGLSGIIYCFSQKDAEQVTMSLQQLGIKAGTYHANMEPKDKSRVH 357
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
RWS N++Q++V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L+
Sbjct: 358 KRWSANEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILY 417
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRY 447
+ D+ R S+MV EN G Q LYD+V Y
Sbjct: 418 YGFGDIFRISTMVVMENVGQQKLYDMVSY 446
>gi|431908388|gb|ELK11985.1| ATP-dependent DNA helicase Q1 [Pteropus alecto]
Length = 1213
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/577 (43%), Positives = 368/577 (63%), Gaps = 38/577 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQS----ELKSLLEAFEASRGSPIQYGGS 61
+ +EL+++ E+ V QI++L++RQ +L ++++ +K LE +A + S S
Sbjct: 572 LTEELDSISNELHAVNVQIQELLERQQELTQKKNILTNRIKQCLEDSDAVKSSECD---S 628
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
SS A N F W + DV NVF + +R Q E IN +SG+D+ ++M GGGKSL
Sbjct: 629 SSPASWN-KEDFPWSDKVKDVLQNVFKLEMFRLLQLETINVTMSGKDIFLVMPTGGGKSL 687
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
CYQLPA+ +G LV+ PL+SL++DQ+M L L I A ML +++SKE K+++ +
Sbjct: 688 CYQLPALCSDGFTLVICPLISLMEDQLMVLKQLEISATMLNASSSKEHVKWVHAEMVNKN 747
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
+LK++YVTPEKI+KSK FMS+LEK + A RL+ I++DE HCCSQWGHDFRPDYK LGIL
Sbjct: 748 SKLKLIYVTPEKIAKSKMFMSRLEKAYEAKRLTRIAVDEVHCCSQWGHDFRPDYKALGIL 807
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
K QFP+ ++ LTATAT V D ++L I KC+ F ++ NRPNL+Y VR+K S + I
Sbjct: 808 KRQFPNTALIGLTATATNHVLKDAQKILCIEKCLTFTASFNRPNLYYEVRQKPSNTEDFI 867
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
++I K I Y N +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH RW
Sbjct: 868 EDIVKLINGRY-NGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHANMEPEDKTKVHRRW 926
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
S N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 927 SANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGF 986
Query: 422 ADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFC 474
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 987 GDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNSEACNKMC 1041
Query: 475 MVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-DS 517
+ + + +I +LQ ++ N++LT L+L+D K+++ +
Sbjct: 1042 DNCCKDISFERKNVTTYCRDLIKILQQAEEMNEKLTPLKLIDSWTGKGASKLRVAGVAPP 1101
Query: 518 DLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
+L RE++E+++ ++ + L F+ I L+I
Sbjct: 1102 ELPREDLEKIIAHFLLQQYLKEDYSFTAYATISYLKI 1138
>gi|291392532|ref|XP_002712674.1| PREDICTED: RecQ protein-like [Oryctolagus cuniculus]
Length = 887
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/582 (42%), Positives = 370/582 (63%), Gaps = 41/582 (7%)
Query: 3 TEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQS----ELKSLLEAFEASRGSPIQY 58
+E + +EL++V +E+ V QI++L++RQ +L ++++ ++K LE ++S G+ +
Sbjct: 242 SETLTEELDSVTSELHAVDIQIQELMERQQELIQKKTVLTKKIKQCLE--DSSAGASNEC 299
Query: 59 GGSSSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGG 117
S +T W+ F W R D N F + +R Q E INA ++G++V ++M GG
Sbjct: 300 DSSPAT----WNKEDFPWSGRVKDTLQNTFRLQKFRQLQLETINATMAGKEVFLVMPTGG 355
Query: 118 GKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL 177
GKSLCYQLPA+ +G LV+ PL+SL++DQ+M L LG+ A ML +++SKE K+++ +
Sbjct: 356 GKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGVSATMLNASSSKEHVKWVHAEM 415
Query: 178 EKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKN 237
+LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK
Sbjct: 416 VNKNSKLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKA 475
Query: 238 LGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVG 297
LGILK QFP+ ++ LTATAT V D ++L + KC+ F ++ NRPNL+Y VR+K S
Sbjct: 476 LGILKRQFPNTSLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPSNT 535
Query: 298 KVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKV 357
+ I++I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+M+ + KV
Sbjct: 536 EDFIEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANMEPEDKTKV 594
Query: 358 HMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLL 417
H RWS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L
Sbjct: 595 HTRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDTKADCIL 654
Query: 418 FFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQV 470
++ D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ +
Sbjct: 655 YYGFGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNSEAC 709
Query: 471 NLFCMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKE 514
N C + H + +I +L+ ++ N++LT L+L+D K+++
Sbjct: 710 NKMCDNCRKDISYEKKNVTEHCRDLIKILKQAEELNEKLTPLKLMDSWMGKGASKLRVAG 769
Query: 515 IDSD-LKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEIS 555
+ + L REE+E+++ ++ + L F+ I L+I
Sbjct: 770 VSAPLLPREELEKMIAHFLLQQYLKEDYSFTAYATISYLKIG 811
>gi|351704749|gb|EHB07668.1| ATP-dependent DNA helicase Q1 [Heterocephalus glaber]
Length = 677
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/578 (42%), Positives = 363/578 (62%), Gaps = 42/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL-KSLLEAFEASRGSPIQYGGSSST 64
+ +EL++V E+ V QI++L +RQ +L +++S L K + + E S Q SS
Sbjct: 42 LTEELDSVTNELHAVDIQIQELTERQQELLQKKSALSKKIKQCLENSDAGASQECDSSPA 101
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A W+ F W + DV NVF + +R Q E IN ++G++V ++M GGGKSLCY
Sbjct: 102 A---WNKEDFPWSDKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCY 158
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +
Sbjct: 159 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSK 218
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 219 LKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKR 278
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S + I++
Sbjct: 279 QFPNTSLIGLTATATNHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIED 338
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH RWS
Sbjct: 339 IVKLINGRY-KGQSGIIYCFSQKDSEQVTISLQKLGIHAGAYHANMEPEDKTKVHTRWSA 397
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N+LQV+V TVAFGMGI+KPDVR+VIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 398 NELQVVVATVAFGMGIDKPDVRYVIHHSMSKSMENYYQESGRAGRDDMRADCILYYGFGD 457
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQ------------YPLHWNIEK--------VRLVI 463
+ R SSMV EN G Q LY++V Y Q + WN E + V
Sbjct: 458 IFRISSMVVMENVGQQKLYEMVSYCQNSKCRRVLIAQHFDEVWNSEACNKMCDNCCKDVS 517
Query: 464 FEKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEIDS 517
FEK + V +C + +I +L+ ++ N++LT L+L+D K+++ + +
Sbjct: 518 FEK-KNVTAYC--------RDLIKILKQAEELNEKLTPLKLIDSWMGKGPGKLRVAGMAA 568
Query: 518 -DLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
+L RE++E+++ ++ + L F+ I L++
Sbjct: 569 PELPREDLEKIIAHFLLQQYLREDYSFTAYATISYLKV 606
>gi|15928520|gb|AAH14735.1| RecQ protein-like [Mus musculus]
Length = 648
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/573 (42%), Positives = 361/573 (63%), Gaps = 31/573 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ +ELE+V +E+ + QI++L +R+ +L +R+S L ++ + + +S A
Sbjct: 7 LTEELESVASELHAIDIQIQELTERRQELLQRKSVLTGKIKQYLEDSAAEASSDLDTSPA 66
Query: 66 VENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
N F W + DV NVF + +R Q E IN ++ +D+ ++M GGGKSLCYQL
Sbjct: 67 AWN-KEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQL 125
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +LK
Sbjct: 126 PALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLK 185
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPEKI+KSK FMS+LEK + AGRL+ +++DE HCCSQWGHDFRPDYK LGILK QF
Sbjct: 186 LIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQF 245
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P+ +M LTATAT V D+ ++L + KC+ F ++ NRPNLFY VR+K S + ++I
Sbjct: 246 PNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIV 305
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
K I Y +SGI+YCFS+K+ EQ+ L++ GI A YHA+M+ + KVH +WS N+
Sbjct: 306 KLINGRY-KGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANE 364
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 365 LQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIF 424
Query: 426 RQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQVNL-------FC 474
R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ + C
Sbjct: 425 RISSMVVMENVGQQKLYEMVSYCQ-----NVSKCRRVLIAQHFDEVWNADACNKMCDNCC 479
Query: 475 MVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKR 521
V + H + +I +L+ + N++LT L+L+D K KL+ + L R
Sbjct: 480 KDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGAAKLRVAGVVAPALPR 539
Query: 522 EEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E++E++V ++ + L F+ I L++
Sbjct: 540 EDLERIVAHALLQQYLKEDYSFTAYATISYLKV 572
>gi|4579744|dbj|BAA75085.1| DNA helicase Q1 [Mus musculus]
Length = 648
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/573 (42%), Positives = 361/573 (63%), Gaps = 31/573 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ +ELE+V +E+ + QI++L +R+ +L +R+S L ++ + + +S A
Sbjct: 7 LTEELESVASELHAIDIQIQELTERRQELLQRKSVLTGKIKQYLEDSSAEASSDLDTSPA 66
Query: 66 VENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
N F W + DV NVF + +R Q E IN ++ +D+ ++M GGGKSLCYQL
Sbjct: 67 AWN-KEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQL 125
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +LK
Sbjct: 126 PALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLK 185
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPEKI+KSK FMS+LEK + AGRL+ +++DE HCCSQWGHDFRPDYK LGILK QF
Sbjct: 186 LIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQF 245
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P+ +M LTATAT V D+ ++L + KC+ F ++ NRPNLFY VR+K S + ++I
Sbjct: 246 PNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIV 305
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
K I Y +SGI+YCFS+K+ EQ+ L++ GI A YHA+M+ + KVH +WS N+
Sbjct: 306 KLINGRY-KGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANE 364
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 365 LQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIF 424
Query: 426 RQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQVNL-------FC 474
R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ + C
Sbjct: 425 RISSMVVMENVGQQKLYEMVSYCQ-----NVSKCRRVLIAQHFDEVWNADACNKMCDNCC 479
Query: 475 MVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKR 521
V + H + +I +L+ + N++LT L+L+D K KL+ + L R
Sbjct: 480 KDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDTWMGKGAPKLRVAGVVAPALPR 539
Query: 522 EEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E++E++V ++ + L F+ I L++
Sbjct: 540 EDLERIVAHALLQQYLKEDYSFTAYATISYLKV 572
>gi|74203917|dbj|BAE28550.1| unnamed protein product [Mus musculus]
Length = 634
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/573 (42%), Positives = 361/573 (63%), Gaps = 31/573 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ +ELE+V +E+ + QI++L +R+ +L +R+S L ++ + + +S A
Sbjct: 7 LTEELESVASELHAIDIQIQELTERRQELLQRKSVLTGKIKQYLEDSAAEASSDLDTSPA 66
Query: 66 VENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
N F W + DV NVF + +R Q E IN ++ +D+ ++M GGGKSLCYQL
Sbjct: 67 AWN-KEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQL 125
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +LK
Sbjct: 126 PALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLK 185
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPEKI+KSK FMS+LEK + AGRL+ +++DE HCCSQWGHDFRPDYK LGILK QF
Sbjct: 186 LIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQF 245
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P+ +M LTATAT V D+ ++L + KC+ F ++ NRPNLFY VR+K S + ++I
Sbjct: 246 PNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIV 305
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
K I Y +SGI+YCFS+K+ EQ+ L++ GI A YHA+M+ + KVH +WS N+
Sbjct: 306 KLINGRY-KGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANE 364
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 365 LQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIF 424
Query: 426 RQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQVNL-------FC 474
R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ + C
Sbjct: 425 RISSMVVMENVGQQKLYEMVSYCQ-----NVSKCRRVLIAQHFDEVWNADACNKMCDNCC 479
Query: 475 MVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKR 521
V + H + +I +L+ + N++LT L+L+D K KL+ + L R
Sbjct: 480 KDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGAAKLRVAGVVAPALPR 539
Query: 522 EEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E++E++V ++ + L F+ I L++
Sbjct: 540 EDLERIVAHALLQQYLKEDYSFTAYATISYLKV 572
>gi|348569184|ref|XP_003470378.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Cavia porcellus]
Length = 650
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/580 (42%), Positives = 362/580 (62%), Gaps = 45/580 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL-KSLLEAFEASRGSPIQYGGSSST 64
+ +EL++V E+ V QI++L +RQ +L +++S L K + + E S + SS
Sbjct: 7 LTEELDSVTNELHAVDIQIQELTERQQELLQKKSALTKKIKQCLENSEAGASKECDSSPA 66
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A W+ F W ++ DV NVF + +R Q E IN ++G ++ ++M GGGKSLCY
Sbjct: 67 A---WNKEDFPWSAKVKDVLQNVFKLQKFRPLQLETINVTMAGEEIFLVMPTGGGKSLCY 123
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 124 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNST 183
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 184 LKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKR 243
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S + I++
Sbjct: 244 QFPNTSLIGLTATATNHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIED 303
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH RWS
Sbjct: 304 IVKLINGRY-KGKSGIIYCFSQKDSEQVTISLQKLGIHAGTYHANMEPEDKTKVHTRWSA 362
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N+LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 363 NELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMRADCILYYGFGD 422
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQ-------------YPLHWNIEK--------VRLV 462
+ R SSMV EN G Q LY++V Y Q + WN E + V
Sbjct: 423 IFRVSSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVWNSEACNKMCDNCCKDV 482
Query: 463 IFEKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD--------KMKIKLKE 514
FEK + V ++C + +I +L+ ++ N++LT L+L+D K+++
Sbjct: 483 SFEK-KNVTVYC--------RDLIKILKQAEELNEKLTPLKLMDSWMGKGPAKLRVAGVA 533
Query: 515 IDSDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
+ + L RE++E+++ ++ + L F+ I L++
Sbjct: 534 VPT-LPREDLEKMIAHFLLQQYLKEDYSFTAYATISYLKV 572
>gi|444719769|gb|ELW60560.1| ATP-dependent DNA helicase Q1, partial [Tupaia chinensis]
Length = 648
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/574 (42%), Positives = 364/574 (63%), Gaps = 32/574 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL-KSLLEAFEASRGSPIQYGGSSST 64
+ +EL+++ +E+ V+ QI++L++RQ +L ++++ + K + + E S + SS
Sbjct: 4 LTEELDSITSELHAVEIQIQELMERQQELIQKKAVITKKIKQCLEDSHDAGASNECDSSP 63
Query: 65 AVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
A N F W + DV NVF + +RA Q E IN ++G++V ++M GGGKSLCYQ
Sbjct: 64 AAWN-KEDFPWSGKVKDVLQNVFKLQKFRALQLETINVTMAGKEVFLVMPTGGGKSLCYQ 122
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + L
Sbjct: 123 LPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSNL 182
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK Q
Sbjct: 183 KLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQ 242
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S + I+++
Sbjct: 243 FPNTSLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDV 302
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+M+ + + KVH RWS N
Sbjct: 303 VKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANMEPDDKTKVHRRWSAN 361
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVIV TVAFGMGI+KPDVRF+IHHS+SKS+E YYQESGRAGRD + ++C+L++ D+
Sbjct: 362 EIQVIVATVAFGMGIDKPDVRFIIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDI 421
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMVV 477
R SSMV EN G Q LY++V Y NI K R V+ F+++ + N C
Sbjct: 422 FRISSMVVMENVGQQKLYEMVSYC-----LNISKCRRVLIAQHFDEVWNSEACNKMCDNC 476
Query: 478 ----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLK 520
+ + + +I +L+ ++ N++LT L+L+D K KL+ + L
Sbjct: 477 CKNISFERKNVTEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVPPMLP 536
Query: 521 REEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
REE+E+++ ++ + L F+ I L+I
Sbjct: 537 REELEKVIAHFLLQQYLKEDYSFTAYATISYLKI 570
>gi|148678690|gb|EDL10637.1| RecQ protein-like, isoform CRA_a [Mus musculus]
Length = 645
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/629 (41%), Positives = 382/629 (60%), Gaps = 53/629 (8%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQS----ELKSLLEAFEASRGSPIQYGGS 61
+ +ELE+V +E+ + QI++L +R+ +L +R+S ++K LE A S +
Sbjct: 7 LTEELESVASELHAIDIQIQELTERRQELLQRKSVLTGKIKQYLEDSSAEASSDL----- 61
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
T+ W+ F W + DV NVF + +R Q E IN ++ +D+ ++M GGGKS
Sbjct: 62 -DTSPAAWNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+LK++YVTPEKI+KSK FMS+LEK + AGRL+ ++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSQLKLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ +M LTATAT V D+ ++L + KC+ F ++ NRPNLFY VR+K S +
Sbjct: 241 LKRQFPNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
++I K I Y +SGI+YCFS+K+ EQ+ L++ GI A YHA+M+ + KVH +
Sbjct: 301 TEDIVKLINGRY-KGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQ 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N+LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQVNL---- 472
D+ R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ +
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NVSKCRRVLIAQHFDEVWNADACNKM 474
Query: 473 ---FCMVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C V + H + +I +L+ + N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFS-----------PGKKIIKLEISSVQKNTADNK 565
L RE++E++V ++ + L F+ P ++ E +V +
Sbjct: 535 PALPREDLERIVAHALLQQYLKEDYSFTAYATISYLKVGPRACLLSNEAHAVTMQVKKSA 594
Query: 566 KSTKRSLTSSALEFE-LDELRKELASISG 593
+S+ R S A + E +D +E +S SG
Sbjct: 595 QSSVRGALSEARQVEQVDSKGEEQSSASG 623
>gi|4579746|dbj|BAA75086.1| DNA helicase Q1 [Mus musculus]
Length = 631
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/573 (42%), Positives = 361/573 (63%), Gaps = 31/573 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ +ELE+V +E+ + QI++L +R+ +L +R+S L ++ + + +S A
Sbjct: 7 LTEELESVASELHAIDIQIQELTERRQELLQRKSVLTGKIKQYLEDSSAEASSDLDTSPA 66
Query: 66 VENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
N F W + DV NVF + +R Q E IN ++ +D+ ++M GGGKSLCYQL
Sbjct: 67 AWN-KEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQL 125
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +LK
Sbjct: 126 PALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLK 185
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPEKI+KSK FMS+LEK + AGRL+ +++DE HCCSQWGHDFRPDYK LGILK QF
Sbjct: 186 LIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQF 245
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P+ +M LTATAT V D+ ++L + KC+ F ++ NRPNLFY VR+K S + ++I
Sbjct: 246 PNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIV 305
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
K I Y +SGI+YCFS+K+ EQ+ L++ GI A YHA+M+ + KVH +WS N+
Sbjct: 306 KLINGRY-KGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANE 364
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 365 LQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIF 424
Query: 426 RQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQVNL-------FC 474
R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ + C
Sbjct: 425 RISSMVVMENVGQQKLYEMVSYCQ-----NVSKCRRVLIAQHFDEVWNADACNKMCDNCC 479
Query: 475 MVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKR 521
V + H + +I +L+ + N++LT L+L+D K KL+ + L R
Sbjct: 480 KDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDTWMGKGAPKLRVAGVVAPALPR 539
Query: 522 EEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E++E++V ++ + L F+ I L++
Sbjct: 540 EDLERIVAHALLQQYLKEDYSFTAYATISYLKV 572
>gi|426225386|ref|XP_004006847.1| PREDICTED: ATP-dependent DNA helicase Q1 [Ovis aries]
Length = 649
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/559 (43%), Positives = 356/559 (63%), Gaps = 41/559 (7%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL----KSLLEAFEASRGSPIQYGGSSS 63
+EL+++ +E+ V QI++L++RQ +L ++++ L K LE EA S +S
Sbjct: 9 EELDSITSELHAVDIQIQELLERQQELIQKKNVLTKRIKLCLEDSEAGESSECDSSPAS- 67
Query: 64 TAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
W+ F W + DV NVF + +R Q E IN +SG++V ++M GGGKSLC
Sbjct: 68 -----WNKEDFAWSGKVKDVLQNVFKLQKFRPLQLETINVTMSGKEVFLVMPTGGGKSLC 122
Query: 123 YQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEG 182
YQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 183 ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
+LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 183 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
QFP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S + I+
Sbjct: 243 RQFPNASLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWS 362
+I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH RWS
Sbjct: 303 DIVKLINGRY-KGQSGIIYCFSQKDSEQVTISLQKLGIPAGSYHANMEPEDKTKVHRRWS 361
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++
Sbjct: 362 ANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSKADCILYYGFG 421
Query: 423 DVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCM 475
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 422 DIFRISSMVVMENVGQQKLYEMVSYCQ-----NIHKCRRVLIAQHFDEVWSPEACNKMCD 476
Query: 476 VV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-DSD 518
+ + + +I +L+ +D N++LT L+L+D K+++ +
Sbjct: 477 NCCKEITFERKNVTAYCRDLIKILKQAEDLNEKLTPLKLIDSWMGKGASKLRVAGLAPPT 536
Query: 519 LKREEIEQLVLQLIIDRVL 537
L RE++E+++ +I + L
Sbjct: 537 LPREDLEKIIAHFLIQQYL 555
>gi|326368226|ref|NP_001191836.1| ATP-dependent DNA helicase Q1 isoform 3 [Mus musculus]
gi|74209854|dbj|BAE23625.1| unnamed protein product [Mus musculus]
gi|148678693|gb|EDL10640.1| RecQ protein-like, isoform CRA_d [Mus musculus]
Length = 631
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/573 (42%), Positives = 360/573 (62%), Gaps = 31/573 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ +ELE+V +E+ + QI++L +R+ +L +R+S L ++ + + +S A
Sbjct: 7 LTEELESVASELHAIDIQIQELTERRQELLQRKSVLTGKIKQYLEDSSAEASSDLDTSPA 66
Query: 66 VENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
N F W + DV NVF + +R Q E IN ++ +D+ ++M GGGKSLCYQL
Sbjct: 67 AWN-KEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQL 125
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +LK
Sbjct: 126 PALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLK 185
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPEKI+KSK FMS+LEK + AGRL+ ++DE HCCSQWGHDFRPDYK LGILK QF
Sbjct: 186 LIYVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGILKRQF 245
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P+ +M LTATAT V D+ ++L + KC+ F ++ NRPNLFY VR+K S + ++I
Sbjct: 246 PNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIV 305
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
K I Y +SGI+YCFS+K+ EQ+ L++ GI A YHA+M+ + KVH +WS N+
Sbjct: 306 KLINGRY-KGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANE 364
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 365 LQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIF 424
Query: 426 RQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQVNL-------FC 474
R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ + C
Sbjct: 425 RISSMVVMENVGQQKLYEMVSYCQ-----NVSKCRRVLIAQHFDEVWNADACNKMCDNCC 479
Query: 475 MVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKR 521
V + H + +I +L+ + N++LT L+L+D K KL+ + L R
Sbjct: 480 KDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGAAKLRVAGVVAPALPR 539
Query: 522 EEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E++E++V ++ + L F+ I L++
Sbjct: 540 EDLERIVAHALLQQYLKEDYSFTAYATISYLKV 572
>gi|110625690|ref|NP_075529.2| ATP-dependent DNA helicase Q1 isoform 1 [Mus musculus]
gi|341941960|sp|Q9Z129.2|RECQ1_MOUSE RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|74215762|dbj|BAE23422.1| unnamed protein product [Mus musculus]
gi|74216639|dbj|BAE37751.1| unnamed protein product [Mus musculus]
gi|148678691|gb|EDL10638.1| RecQ protein-like, isoform CRA_b [Mus musculus]
Length = 648
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/573 (42%), Positives = 360/573 (62%), Gaps = 31/573 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ +ELE+V +E+ + QI++L +R+ +L +R+S L ++ + + +S A
Sbjct: 7 LTEELESVASELHAIDIQIQELTERRQELLQRKSVLTGKIKQYLEDSSAEASSDLDTSPA 66
Query: 66 VENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
N F W + DV NVF + +R Q E IN ++ +D+ ++M GGGKSLCYQL
Sbjct: 67 AWN-KEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQL 125
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +LK
Sbjct: 126 PALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLK 185
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPEKI+KSK FMS+LEK + AGRL+ ++DE HCCSQWGHDFRPDYK LGILK QF
Sbjct: 186 LIYVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGILKRQF 245
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P+ +M LTATAT V D+ ++L + KC+ F ++ NRPNLFY VR+K S + ++I
Sbjct: 246 PNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIV 305
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
K I Y +SGI+YCFS+K+ EQ+ L++ GI A YHA+M+ + KVH +WS N+
Sbjct: 306 KLINGRY-KGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANE 364
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 365 LQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIF 424
Query: 426 RQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQVNL-------FC 474
R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ + C
Sbjct: 425 RISSMVVMENVGQQKLYEMVSYCQ-----NVSKCRRVLIAQHFDEVWNADACNKMCDNCC 479
Query: 475 MVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKR 521
V + H + +I +L+ + N++LT L+L+D K KL+ + L R
Sbjct: 480 KDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGAAKLRVAGVVAPALPR 539
Query: 522 EEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E++E++V ++ + L F+ I L++
Sbjct: 540 EDLERIVAHALLQQYLKEDYSFTAYATISYLKV 572
>gi|148678692|gb|EDL10639.1| RecQ protein-like, isoform CRA_c [Mus musculus]
Length = 662
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/578 (42%), Positives = 363/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQS----ELKSLLEAFEASRGSPIQYGGS 61
+ +ELE+V +E+ + QI++L +R+ +L +R+S ++K LE A S +
Sbjct: 21 LTEELESVASELHAIDIQIQELTERRQELLQRKSVLTGKIKQYLEDSSAEASSDL----- 75
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
T+ W+ F W + DV NVF + +R Q E IN ++ +D+ ++M GGGKS
Sbjct: 76 -DTSPAAWNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKS 134
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 135 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 194
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+LK++YVTPEKI+KSK FMS+LEK + AGRL+ ++DE HCCSQWGHDFRPDYK LGI
Sbjct: 195 NSQLKLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGI 254
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ +M LTATAT V D+ ++L + KC+ F ++ NRPNLFY VR+K S +
Sbjct: 255 LKRQFPNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDF 314
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
++I K I Y +SGI+YCFS+K+ EQ+ L++ GI A YHA+M+ + KVH +
Sbjct: 315 TEDIVKLINGRY-KGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQ 373
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N+LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++
Sbjct: 374 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYG 433
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQVNL---- 472
D+ R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ +
Sbjct: 434 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NVSKCRRVLIAQHFDEVWNADACNKM 488
Query: 473 ---FCMVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C V + H + +I +L+ + N++LT L+L+D K KL+ +
Sbjct: 489 CDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGAAKLRVAGVVA 548
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E++V ++ + L F+ I L++
Sbjct: 549 PALPREDLERIVAHALLQQYLKEDYSFTAYATISYLKV 586
>gi|149714020|ref|XP_001502209.1| PREDICTED: ATP-dependent DNA helicase Q1 [Equus caballus]
Length = 649
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/556 (42%), Positives = 357/556 (64%), Gaps = 31/556 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ +EL++V +E+ V+ Q+++L++RQ +L +++ L + ++ G+ SS A
Sbjct: 7 LTEELDSVTSELHAVEVQLQELLERQQELIHKKNILTNRIKQSLEDCGAGESNECDSSPA 66
Query: 66 VENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
N F W + DV NVF + +R Q E IN +SG++V ++M GGGKSLCYQL
Sbjct: 67 AWN-REDFPWSGKVKDVLQNVFKLRVFRLLQLETINVTMSGKEVFLVMPTGGGKSLCYQL 125
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +LK
Sbjct: 126 PALCSDGFTLVICPLISLMEDQLMVLEQLGISATMLNASSSKEHVKWVHAEMVNKNSKLK 185
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPEKISKS+ FMS+LEK + AGR + I++DE HCCS WGHDFRPDYK LG+LK QF
Sbjct: 186 LIYVTPEKISKSRMFMSRLEKAYEAGRFTRIAVDEVHCCSHWGHDFRPDYKALGVLKRQF 245
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P+ ++ LTATAT V D E+L + KC+ F ++ NRPNL+Y VR+K S + I+++
Sbjct: 246 PNTSLIGLTATATSHVLKDAQEILCVEKCLTFTASFNRPNLYYEVRQKPSNTEDFIEDVV 305
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH RWS N+
Sbjct: 306 KLIHGRY-KGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHANMEPEDKTKVHRRWSANE 364
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
+QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D+
Sbjct: 365 IQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIF 424
Query: 426 RQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMVV- 477
R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ + N C
Sbjct: 425 RISSMVVMENVGQQKLYEMVSYCQ-----NMSKCRRVLIAQHFDEVWNSEACNKMCDNCC 479
Query: 478 ---------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKR 521
+ + + +I +L+ ++ N++LT L+L+D K K + + L R
Sbjct: 480 KEISFERKDVTAYCRDLIKILKQAENLNEKLTPLKLIDSWMGKGAAKFRVAGVVPPTLPR 539
Query: 522 EEIEQLVLQLIIDRVL 537
E++E+++ ++ + L
Sbjct: 540 EDLEKMIAHFLLQQYL 555
>gi|440908097|gb|ELR58155.1| ATP-dependent DNA helicase Q1, partial [Bos grunniens mutus]
Length = 649
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/578 (42%), Positives = 364/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL----KSLLEAFEASRGSPIQYGGS 61
+ +EL+++ +E+ V QI++L++RQ +L ++++ L K LE +A S +
Sbjct: 7 LTEELDSITSELHAVDIQIQELLERQQELIQKKNVLTKRIKLCLEDSDAGESSECDSSPA 66
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
S W+ F W + DV NVF + +R Q E IN +SG++V ++M GGGKS
Sbjct: 67 S------WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMSGKEVFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSKLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH R
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTISLQKLGIPAGAYHANMEPEDKTKVHRR 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W+ N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WAANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NINKCRRVLIAQHFDEVWSPEACNKM 474
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-D 516
C + + + +I +L+ +D N++LT L+L+D K+++ +
Sbjct: 475 CDNCCKEISFERKNVTAYCRDLIKILKQAEDLNEKLTPLKLIDSWMGKGASKLRVAGLAP 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L++
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKV 572
>gi|326368214|ref|NP_001191835.1| ATP-dependent DNA helicase Q1 isoform 2 [Mus musculus]
Length = 634
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/573 (42%), Positives = 360/573 (62%), Gaps = 31/573 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
+ +ELE+V +E+ + QI++L +R+ +L +R+S L ++ + + +S A
Sbjct: 7 LTEELESVASELHAIDIQIQELTERRQELLQRKSVLTGKIKQYLEDSSAEASSDLDTSPA 66
Query: 66 VENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
N F W + DV NVF + +R Q E IN ++ +D+ ++M GGGKSLCYQL
Sbjct: 67 AWN-KEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQL 125
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +LK
Sbjct: 126 PALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLK 185
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPEKI+KSK FMS+LEK + AGRL+ ++DE HCCSQWGHDFRPDYK LGILK QF
Sbjct: 186 LIYVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGILKRQF 245
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P+ +M LTATAT V D+ ++L + KC+ F ++ NRPNLFY VR+K S + ++I
Sbjct: 246 PNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIV 305
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
K I Y +SGI+YCFS+K+ EQ+ L++ GI A YHA+M+ + KVH +WS N+
Sbjct: 306 KLINGRY-KGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANE 364
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 365 LQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIF 424
Query: 426 RQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQVNL-------FC 474
R SSMV EN G Q LY++V Y Q N+ K R V+ F+++ + C
Sbjct: 425 RISSMVVMENVGQQKLYEMVSYCQ-----NVSKCRRVLIAQHFDEVWNADACNKMCDNCC 479
Query: 475 MVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKR 521
V + H + +I +L+ + N++LT L+L+D K KL+ + L R
Sbjct: 480 KDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGAAKLRVAGVVAPALPR 539
Query: 522 EEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E++E++V ++ + L F+ I L++
Sbjct: 540 EDLERIVAHALLQQYLKEDYSFTAYATISYLKV 572
>gi|403269130|ref|XP_003926609.1| PREDICTED: ATP-dependent DNA helicase Q1 [Saimiri boliviensis
boliviensis]
Length = 649
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/575 (42%), Positives = 361/575 (62%), Gaps = 35/575 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL-KSLLEAFEASRGSPIQYGGSSST 64
+ +EL++V +E+ V+ QI++L +RQ +L +++ L K + + E S SS
Sbjct: 7 LTEELDSVTSELHAVEIQIQELTERQQELIQKKKVLTKKIQQCLEDSDAGASNECDSSPA 66
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A W+ + W + DV NVF + +R Q E IN ++G++V ++M GGGKSLCY
Sbjct: 67 A---WNKEDYPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCY 123
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + E
Sbjct: 124 QLPALCLDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSE 183
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 184 LKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKR 243
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K + I++
Sbjct: 244 QFPNASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRPNLYYEVRQKPPNTEDFIED 303
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+M+ + KVH +WS
Sbjct: 304 IVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANMEPEDKTKVHRKWSA 362
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMV 476
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 423 IFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKMCDN 477
Query: 477 V----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDL 519
+ + + +I +L+ ++ N++LT L+L+D K KL+ + L
Sbjct: 478 CCKDISFERKNVTEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPTL 537
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ +I + L F+ I L+I
Sbjct: 538 PREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|290490728|dbj|BAI79324.1| RecQ1 helicae [Gallus gallus]
Length = 607
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/523 (46%), Positives = 339/523 (64%), Gaps = 33/523 (6%)
Query: 59 GGS--SSTAVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAA 115
GGS + T+VE W+ T F W + N F + +R+ Q E +NA ++G+D+ ++M
Sbjct: 16 GGSKETETSVEAWNRTDFPWYEKIKTALQNKFKLQKFRSLQLETVNATMAGKDIFLVMPT 75
Query: 116 GGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYK 175
GGGKSLCYQLPAV +G LV+ PL+SL++DQ+M L LGI A +L +++SKE K+++
Sbjct: 76 GGGKSLCYQLPAVCSDGFTLVICPLISLMEDQLMVLDQLGISATLLNASSSKEHVKWVHA 135
Query: 176 ALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDY 235
+ +LK+LYVTPEKI+KSK FMSKLEK + AG L+ I++DE HCCSQWGHDFRPDY
Sbjct: 136 QMLDRSSQLKLLYVTPEKIAKSKMFMSKLEKAYQAGCLARIAVDEVHCCSQWGHDFRPDY 195
Query: 236 KNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSS 295
K+LGILK QFP P++ LTATAT V D +LHI+KCI F ++ NRPNL+Y VR K S
Sbjct: 196 KSLGILKRQFPCAPLIGLTATATNHVLKDAQNILHIQKCITFTASFNRPNLYYEVRHKPS 255
Query: 296 VGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINARE 355
+ I++I K I Y SGIVYCFS+K+ EQV L++ GI A YHA+MD +
Sbjct: 256 NNEDFIEDIVKLINGRY-KGLSGIVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKT 314
Query: 356 KVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSEC 415
KVH W+ N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C
Sbjct: 315 KVHKGWAANQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADC 374
Query: 416 LLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQ-- 469
+L++ D+ R SSMV EN G + LYD+V Y Q N+ K R V+ F+++ +
Sbjct: 375 ILYYGFGDIFRISSMVVMENVGQEKLYDMVSYCQ-----NMNKCRRVLIACHFDEVWESA 429
Query: 470 -VNLFCMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKL 512
N C + G+ + +I +L+ + +++LT L+L+D K+++
Sbjct: 430 NCNRMCDNCCRENSLEKKDITGYCRDLIKILEQADNMSEKLTPLKLIDAWSGKGLSKLRV 489
Query: 513 KEID-SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
E+ L REE+E+++ L++ + L F+ I L+I
Sbjct: 490 AEVTPPKLPREELERIIAHLLLQQYLREDFSFTAFATISYLKI 532
>gi|62858709|ref|NP_001016316.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|89266858|emb|CAJ83846.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|213624210|gb|AAI70790.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
Length = 558
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/565 (43%), Positives = 358/565 (63%), Gaps = 36/565 (6%)
Query: 1 METEE---ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQ 57
M++EE ++ ELE+V +E++ V+ Q+++L++RQ +L +R+ L ++ G
Sbjct: 1 MDSEEAAALVDELESVSSELQAVEIQLQELLERQQELIQRKRLLNKKIQRLSEDSGPGTS 60
Query: 58 YGGSSSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAG 116
GG S ENW F W + D N F + ++R+ Q E INA ++GRDV +IM G
Sbjct: 61 AGGGDSA--ENWQKEDFLWSQKIRDALCNSFQLRSFRSLQLETINATMAGRDVFLIMPTG 118
Query: 117 GGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKA 176
GGKSLCYQLPAV +G LV+ PL+SL++DQ+M L LG+ A L +++SKE K+++
Sbjct: 119 GGKSLCYQLPAVCSDGFTLVICPLVSLMEDQLMVLDRLGVSATSLNASSSKEHVKWVHGE 178
Query: 177 LEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236
+ LK+LYVTPEKI+KSK FMS+LEK + AG L+ +++DE HCCSQWGHDFRPDYK
Sbjct: 179 MTNKNSRLKLLYVTPEKIAKSKLFMSRLEKAYQAGLLARVAVDEVHCCSQWGHDFRPDYK 238
Query: 237 NLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSV 296
LGILK QFP+ P++ LTATAT V D ++L + K + F ++ NRPNLFY VR K S
Sbjct: 239 TLGILKRQFPNSPLIGLTATATTHVLKDAQKILCVPKPLTFTASFNRPNLFYEVRLKPSS 298
Query: 297 GKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREK 356
+ I +I K I Y +SGI+YCFS+K+ E V L++ GI A YHA+M+ + K
Sbjct: 299 SQDFIADIVKLINSRY-RGQSGIIYCFSQKDSEHVTMSLQKLGIRAGTYHANMEPRDKTK 357
Query: 357 VHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECL 416
VH +W+ N++Q++V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+
Sbjct: 358 VHTKWTANEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDARADCI 417
Query: 417 LFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQ 469
L++ D+ R SSMV EN G + LY++V Y Q P ++ R V+ F+++ +
Sbjct: 418 LYYGFGDIFRISSMVVMENVGQKKLYEMVGYCQSP-----DRCRRVLIAQHFDEVWDSAK 472
Query: 470 VNLFC----------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLK 513
N C + + + I+ +L+ +++LT L+L+D K+++
Sbjct: 473 CNKMCDNCNSEGGWEKADITPYCRDIVKILEQANQMDEKLTPLKLMDAWVGKGVAKLRVP 532
Query: 514 EI-DSDLKREEIEQLVLQLIIDRVL 537
+ L R EIE+++ L++ + L
Sbjct: 533 GVRPPQLPRPEIERIIAHLLLQQFL 557
>gi|291228382|ref|XP_002734149.1| PREDICTED: RecQ protein-like (DNA helicase Q1-like)-like
[Saccoglossus kowalevskii]
Length = 785
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/531 (44%), Positives = 342/531 (64%), Gaps = 42/531 (7%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSS 63
++ +L VE E+ VQ QI++L+DRQ QL ++ +L+ + + IQ GGS
Sbjct: 8 KDYFGQLSKVEDEIAAVQHQIEELLDRQQQLQSKKHDLEREI--------AKIQKGGSVV 59
Query: 64 TAVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
+ + ++G F W + D++ +VF I YR +Q E +NA LSGRD+++IM G GKSLC
Sbjct: 60 SKGDKFNGNDFPWSKKLDELSRSVFKIDEYRPHQLEAMNATLSGRDLILIMPTGSGKSLC 119
Query: 123 YQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL-EKGE 181
+QLPA++ +GI LVVSPL+SL++DQ+M L G+ +L + ++KE + +++K + +
Sbjct: 120 FQLPALISKGITLVVSPLVSLMEDQLMSLDMCGVNGALLNADSTKEHKNYVHKCMIDPHS 179
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
+LK+LYVTPEKI+KSK FMSKLEK + AG+ + I IDE HCCSQWGHDFR DYK LGIL
Sbjct: 180 QDLKILYVTPEKIAKSKMFMSKLEKMYKAGKFARIVIDEVHCCSQWGHDFRRDYKVLGIL 239
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
K QFP+VP++ LTATATQ + +D+ +L++ C+ ++ +RPNL+Y VR K + +
Sbjct: 240 KRQFPEVPLLGLTATATQHILDDVKNLLNVPYCMTMRASYDRPNLYYEVRRKPKKHEECV 299
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
EI+K + + + GI+YCFSRK+CE +A +LR+ GI A YH+D+D + R ++H W
Sbjct: 300 AEISKLLNGKF-KGQIGIIYCFSRKDCETIAADLRKGGIEALPYHSDIDSSRRSQIHRAW 358
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
+K +QV+V T+AFGMGI+KP+VRFVIHH++SKSVE YYQESGRAGRDGLP+ C+LF
Sbjct: 359 AKETIQVVVATIAFGMGIDKPNVRFVIHHTMSKSVENYYQESGRAGRDGLPAYCILFLGF 418
Query: 422 ADVPRQSSMVFYEN-SGLQNLYDIVRYSQYPLHWNIEKVRLVIFEK-------LQQVNLF 473
D+ RQS+MV E + L NLY++VRY NIE+ R + + Q +
Sbjct: 419 GDIFRQSTMVLTETQTALDNLYNMVRYCT-----NIERCRRSLIARHFGESWDFSQCSGM 473
Query: 474 CMVV------------------LAGHAQCIISLLQDIQDNNQRLTMLQLVD 506
C + GH Q + ++L +++LT +LVD
Sbjct: 474 CDNCRLKRKSEDSSCALTQNRDITGHCQTLYTILNKAASQDKKLTANKLVD 524
>gi|387015566|gb|AFJ49902.1| ATP-dependent DNA helicase Q1 [Crotalus adamanteus]
Length = 652
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/577 (43%), Positives = 357/577 (61%), Gaps = 44/577 (7%)
Query: 3 TEEILQE-LENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS 61
T +LQE L +V+ E++ ++ QI++L++ Q QL ++++ LK + F S + G S
Sbjct: 4 TLSVLQEELVSVDNELQALEIQIQELLEHQQQLIQKKTVLKKKITHF-----SDTESGSS 58
Query: 62 SST--AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
T A E+W+ F W ++ DV FG+ +R Q E INA ++GRDV ++M GGG
Sbjct: 59 KETESATEDWNKEDFPWSTKIRDVLQKSFGLQNFRPLQLETINATMAGRDVFLVMPTGGG 118
Query: 119 KSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
KSLCYQLPA G LV+ PL+SL++DQ+M L LG+ A +L +++SKE K+++ +
Sbjct: 119 KSLCYQLPAEGSPGFTLVICPLISLMEDQLMMLEQLGVSATLLNASSSKEHVKWVHAEML 178
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
+LK+LYVTPEKI+KSK FMSKLEK + G+L+ I++DE HCCSQWGHDFRPDYK L
Sbjct: 179 SRNSQLKLLYVTPEKIAKSKMFMSKLEKAYQTGQLTRIAVDEVHCCSQWGHDFRPDYKLL 238
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
GILK QFP+ P++ LTATAT V D +L + KCI F ++ NRPNL+Y VR+K S +
Sbjct: 239 GILKRQFPNAPLIGLTATATGHVLRDAQNILCVPKCIIFTASFNRPNLYYEVRQKPSSAQ 298
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
I++I K I Y SGI+YCFS+K+ EQV L++ GI A YHA+M+ + +VH
Sbjct: 299 NCIEDIVKLINGRY-KGLSGIIYCFSQKDAEQVTMSLQKLGIKAGTYHANMEPKDKSRVH 357
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
RW N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L+
Sbjct: 358 KRWCANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQRADCILY 417
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRYS---------QYPLH----WNIEKVRLVIFE 465
+ D+ R S+MV EN G Q LY +V Y Q H W+ +
Sbjct: 418 YGFGDIFRISTMVVMENVGQQKLYGMVSYCHDMGRCRRVQIAHHFDEAWDSASCNKMCDN 477
Query: 466 KLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEIDSDL 519
Q+ L M V A H + ++ +L+ + ++ T L+L+D K+ L+ L
Sbjct: 478 CCQEETLEKMDV-AEHCRDLLKILEQVDQRKEKFTPLKLIDAWLGKGLSKLGLEIAAPRL 536
Query: 520 KREEIEQLVLQLIIDRVL--------------VRIGP 542
RE +E++V LI+ + L V+IGP
Sbjct: 537 PREVLERIVAHLILQQYLKEDFSFTAFATISYVKIGP 573
>gi|118151080|ref|NP_001071459.1| ATP-dependent DNA helicase Q1 [Bos taurus]
gi|117306200|gb|AAI26496.1| RecQ protein-like (DNA helicase Q1-like) [Bos taurus]
gi|296487303|tpg|DAA29416.1| TPA: RecQ protein-like (DNA helicase Q1-like) [Bos taurus]
Length = 649
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/576 (42%), Positives = 362/576 (62%), Gaps = 41/576 (7%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL----KSLLEAFEASRGSPIQYGGSSS 63
+EL+++ +E+ V QI++L++RQ +L ++++ L K LE +A S +S
Sbjct: 9 EELDSITSELHAVDIQIQELLERQQELIQKKNVLTKRIKLCLEDSDAGESSECDSSPAS- 67
Query: 64 TAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
W+ F W + DV NVF + +R Q E IN +SG++V ++M GGGKSLC
Sbjct: 68 -----WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMSGKEVFLVMPTGGGKSLC 122
Query: 123 YQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEG 182
YQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++ KE K+++ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSPKEHVKWVHAEMVNKNS 182
Query: 183 ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
+LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 183 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
QFP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S + I+
Sbjct: 243 RQFPNASLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWS 362
+I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH RW+
Sbjct: 303 DIVKLINGRY-KGQSGIIYCFSQKDSEQVTISLQKLGIPAGAYHANMEPEDKTKVHRRWA 361
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 362 ANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFG 421
Query: 423 DVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCM 475
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 422 DIFRISSMVVMENVGQQKLYEMVSYCQ-----NINKCRRVLIAQHFDEVWSPEACNKMCD 476
Query: 476 VV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-DSD 518
+ + + +I +L+ +D N++LT L+L+D K+++ +
Sbjct: 477 NCCKEISFERKNVTAYCRDLIKILKQAEDLNEKLTPLKLIDSWMGKGASKLRVAGLAPPT 536
Query: 519 LKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L++
Sbjct: 537 LPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKV 572
>gi|354482050|ref|XP_003503213.1| PREDICTED: ATP-dependent DNA helicase Q1 [Cricetulus griseus]
gi|344244467|gb|EGW00571.1| ATP-dependent DNA helicase Q1 [Cricetulus griseus]
Length = 648
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/577 (41%), Positives = 362/577 (62%), Gaps = 35/577 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL-KSLLEAFEASRGSPIQYGGSSST 64
+ +ELE+V E+ + QI++L +RQ +L ++++ L K + + E GS + +
Sbjct: 7 LTEELESVTNELHAIDIQIQELTERQQELVQKKAVLTKKIKQCLE---GSDAEASSDCDS 63
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
+ W+ F W + DV NV + +R Q E +N ++ +D+ ++M GGGKSLCY
Sbjct: 64 SPAEWNKEDFPWSGKVKDVLQNVLKLQKFRPLQLETVNVTMARKDIFLVMPTGGGKSLCY 123
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +
Sbjct: 124 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQ 183
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + AGRL+ I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 184 LKLVYVTPEKIAKSKMFMSRLEKAYEAGRLTRIAVDEVHCCSQWGHDFRPDYKALGILKR 243
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ ++ LTATAT V D ++L + KC+ F ++ NRPNL+Y VR+K + I++
Sbjct: 244 QFPNTSLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPPNAEDFIED 303
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y SGI+YCFS+K+ EQV L++ GI A YHA+M+ + +VH +WS
Sbjct: 304 IVKLINGRY-KGRSGIIYCFSQKDSEQVTISLQKLGIRAGTYHANMEPEDKTRVHTQWSA 362
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N+LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D
Sbjct: 363 NELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGD 422
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQV---NLFCMV 476
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ N C
Sbjct: 423 IFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNADACNKMCDN 477
Query: 477 V----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEIDSD-L 519
+ H + ++ +L+ ++ N++LT L+L+D K+++ + + L
Sbjct: 478 CCKDLLLEKKNITQHCRDLVKILKQAEELNEKLTPLKLMDAWMGKGAPKLRVAGVVAPVL 537
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEISS 556
RE++E+++ ++ + L F+ I L++ S
Sbjct: 538 PREDLEKIIAHALLQQYLKEDYSFTAYATISYLKVGS 574
>gi|395839223|ref|XP_003792496.1| PREDICTED: ATP-dependent DNA helicase Q1 [Otolemur garnettii]
Length = 648
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/574 (42%), Positives = 361/574 (62%), Gaps = 32/574 (5%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL-KSLLEAFEASRGSPIQYGGSSST 64
+ +EL+++ E+ V+ QI++L++RQ +L ++++ L K + + E + SS
Sbjct: 7 LTEELDSINNELHAVEIQIQELLERQQELIQKKTVLTKKIKQGLEEDSDAGASNECDSSP 66
Query: 65 AVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
A N F W + DV NVF + +R Q E INA ++G++V ++M GGGKSLCYQ
Sbjct: 67 AAWN-KEDFPWSGKVKDVLQNVFKLQKFRPLQLETINATMAGKEVFLVMPTGGGKSLCYQ 125
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPA+ +G LV+ PL+SL++DQ+M L L I A ML +++SKE K+++ + +L
Sbjct: 126 LPALCSDGFTLVICPLISLMEDQLMVLKQLEISATMLNASSSKEHVKWVHAEMLNKNSKL 185
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK Q
Sbjct: 186 KLIYVTPEKIAKSKMFMSRLEKAYEAKRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQ 245
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S + I++I
Sbjct: 246 FPNTSLIGLTATATNHVLKDAQKILCVGKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDI 305
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
K I Y +SGI+YCFS+K+ EQV L+ GI+A YHA+M+ + +VH W+ N
Sbjct: 306 VKLINGRY-KGQSGIIYCFSQKDSEQVTGSLQSLGINAGAYHANMEPEDKTRVHRSWAAN 364
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D+
Sbjct: 365 ELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDI 424
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKLQQ---VNLFCMVV 477
R SSMV EN G Q LY++V Y Q NI K R V+ F+++ N C
Sbjct: 425 FRVSSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNSDACNKMCDNC 479
Query: 478 ----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLK 520
+ + + +I +L+ ++ N++LT L+L+D K KL+ + L
Sbjct: 480 CKDTSFERKNVTQYCRDLIKILKQAEEMNEKLTPLKLIDSWMGKGAAKLRVGGVVPPTLP 539
Query: 521 REEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ ++ + L F+ I L+I
Sbjct: 540 REDLEKIIAHFLLQQYLKEDYSFTAYATISYLKI 573
>gi|197100975|ref|NP_001124706.1| ATP-dependent DNA helicase Q1 [Pongo abelii]
gi|75070978|sp|Q5RF63.1|RECQ1_PONAB RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|55725460|emb|CAH89594.1| hypothetical protein [Pongo abelii]
Length = 649
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/578 (42%), Positives = 362/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS----LLEAFEASRGSPIQYGGS 61
+ +EL+++ +E+ V+ QI++L +RQ++L +++ L LE +A G+ +Y S
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQEELIQKKKVLTKKIKQCLEDSDA--GASNEYDSS 64
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ W+ F W + DV NVF + +R Q E IN ++G++V ++M GGGK
Sbjct: 65 PAA----WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKG 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV LR GI A YHA+++ + VH +
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLRNLGIHAGAYHANLEPEDKTTVHRK 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV-RLVIFEKLQQV------NLF 473
D+ R SSMV EN G Q LY++V Y Q NI K RL++ + +V N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRLLMAQHFDEVWNSEACNKM 474
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C + + + +I +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|332232887|ref|XP_003265634.1| PREDICTED: ATP-dependent DNA helicase Q1 [Nomascus leucogenys]
Length = 649
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/578 (42%), Positives = 363/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS----LLEAFEASRGSPIQYGGS 61
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L LE +A G+ +Y S
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDA--GASNEYDSS 64
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ W+ F W + DV NVF + +R Q E IN ++G++V ++M GGGKS
Sbjct: 65 PAA----WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRK 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKM 474
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C + + + +I +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|14591902|ref|NP_116559.1| ATP-dependent DNA helicase Q1 [Homo sapiens]
gi|14591904|ref|NP_002898.2| ATP-dependent DNA helicase Q1 [Homo sapiens]
gi|218512113|sp|P46063.3|RECQ1_HUMAN RecName: Full=ATP-dependent DNA helicase Q1; AltName: Full=DNA
helicase, RecQ-like type 1; Short=RecQ1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|119616840|gb|EAW96434.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616841|gb|EAW96435.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616842|gb|EAW96436.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616843|gb|EAW96437.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616844|gb|EAW96438.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|158256686|dbj|BAF84316.1| unnamed protein product [Homo sapiens]
gi|261858616|dbj|BAI45830.1| RecQ protein-like [synthetic construct]
Length = 649
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/578 (42%), Positives = 363/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS----LLEAFEASRGSPIQYGGS 61
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L LE +A G+ +Y S
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDA--GASNEYDSS 64
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ W+ F W + D+ NVF + +R Q E IN ++G++V ++M GGGKS
Sbjct: 65 PAA----WNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRK 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKM 474
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C + + + +I +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|531243|dbj|BAA07200.1| DNA helicase Q1 [Homo sapiens]
Length = 649
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/578 (42%), Positives = 363/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS----LLEAFEASRGSPIQYGGS 61
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L LE +A G+ +Y S
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDA--GASNEYDSS 64
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ W+ F W + D+ NVF + +R Q E IN ++G++V ++M GGGKS
Sbjct: 65 PAA----WNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRK 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKM 474
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C + + + +I +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|402885395|ref|XP_003906142.1| PREDICTED: ATP-dependent DNA helicase Q1 [Papio anubis]
Length = 649
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/575 (42%), Positives = 359/575 (62%), Gaps = 35/575 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-EAFEASRGSPIQYGGSSST 64
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L + + E S SS
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDAGASNEHDSSPA 66
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A W+ F W + DV NVF + +R Q E IN ++G++V ++M GGGKSLCY
Sbjct: 67 A---WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCY 123
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + E
Sbjct: 124 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSE 183
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 184 LKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKR 243
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP ++ LTATAT V D ++L + KC F ++ NRPNLFY VR+K S + I++
Sbjct: 244 QFPKASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRPNLFYEVRQKPSNTEDFIED 303
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +WS
Sbjct: 304 IVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTAVHRKWSA 362
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMV 476
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 423 IFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKMCDN 477
Query: 477 V----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDL 519
+ + + +I +L+ ++ N++LT L+L+D K KL+ + L
Sbjct: 478 CCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPTL 537
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ +I + L F+ I L+I
Sbjct: 538 PREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|12654453|gb|AAH01052.1| RecQ protein-like (DNA helicase Q1-like) [Homo sapiens]
gi|30583077|gb|AAP35783.1| RecQ protein-like (DNA helicase Q1-like) [Homo sapiens]
gi|61359045|gb|AAX41660.1| RecQ protein-like [synthetic construct]
Length = 649
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/578 (42%), Positives = 363/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS----LLEAFEASRGSPIQYGGS 61
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L LE +A G+ +Y S
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDA--GASNEYDSS 64
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ W+ F W + D+ NVF + +R Q E IN ++G++V ++M GGGKS
Sbjct: 65 PAA----WNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRK 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKM 474
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C + + + +I +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|410963996|ref|XP_003988543.1| PREDICTED: ATP-dependent DNA helicase Q1 [Felis catus]
Length = 804
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/576 (42%), Positives = 363/576 (63%), Gaps = 35/576 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-EAFEASRGSPIQYGGSSST 64
+ +ELE+V E+ V QI++L+++Q +L ++++ L + + + FE S SS
Sbjct: 160 LTEELESVTNELHAVDIQIQELLEKQQELIQKKNILTNQIKQHFEDSDAGESSDWDSSPA 219
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A W+ F W + +V NVF + +R Q E IN +SG++V ++M GGGKSLCY
Sbjct: 220 A---WNKEDFPWSGKVKEVLQNVFKLQRFRLLQLETINVTMSGKEVFLVMPTGGGKSLCY 276
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++ KE K+++ + +
Sbjct: 277 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSPKEHVKWVHAEMVNKNSK 336
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCS WGHDFRPDYK LGILK
Sbjct: 337 LKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSHWGHDFRPDYKALGILKR 396
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y +R+K S + I++
Sbjct: 397 QFPNTALIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEIRQKPSNTEDFIED 456
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH RWS
Sbjct: 457 IVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTKVHRRWSA 515
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 516 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAGRDDMRADCILYYGFGD 575
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFC-- 474
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 576 IFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNSEACNRMCDN 630
Query: 475 --------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-DSDL 519
+ + + + +I +L+ +D N++LT L+L+D K+++ + L
Sbjct: 631 CCKDISCEVKNVTAYCRDLIKILKQAEDLNEKLTPLKLMDSWMGKGASKLRVAGVAPPQL 690
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEIS 555
RE++E+++ ++ + L F+ I L+I
Sbjct: 691 PREDLEKIIAHFLLQQYLKEDYSFTAYATISYLKIG 726
>gi|30584589|gb|AAP36547.1| Homo sapiens RecQ protein-like (DNA helicase Q1-like) [synthetic
construct]
gi|61369219|gb|AAX43302.1| RecQ protein-like [synthetic construct]
Length = 650
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/578 (42%), Positives = 363/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS----LLEAFEASRGSPIQYGGS 61
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L LE +A G+ +Y S
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDA--GASNEYDSS 64
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ W+ F W + D+ NVF + +R Q E IN ++G++V ++M GGGKS
Sbjct: 65 PAA----WNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRK 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKM 474
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C + + + +I +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|619863|gb|AAA60261.1| DNA helicase [Homo sapiens]
Length = 659
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/578 (42%), Positives = 363/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS----LLEAFEASRGSPIQYGGS 61
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L LE +A G+ +Y S
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDA--GASNEYDSS 64
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ W+ F W + D+ NVF + +R Q E IN ++G++V ++M GGGKS
Sbjct: 65 PAA----WNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHDEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRK 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKSRRVLMAQHFDEVWNSEACNKM 474
Query: 474 C----------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C + + + +I +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDSAFERTNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYAAISYLKI 572
>gi|358679347|ref|NP_001240636.1| ATP-dependent DNA helicase Q1 [Sus scrofa]
Length = 649
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/574 (42%), Positives = 362/574 (63%), Gaps = 37/574 (6%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLE--AFEASRGSPIQYGGSSSTA 65
+EL+++ E+ V QI+ L++RQ +L +++ L+ ++ + + G +Y S ++
Sbjct: 9 EELDSITNELHAVDIQIQGLLERQQELIQKKKILEKRIKQCSEDPDAGESSEYDSSPAS- 67
Query: 66 VENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
W+ F W + +V N+F + +R Q E IN +SG++V ++M GGGKSLCYQ
Sbjct: 68 ---WNKEDFPWSGKVKEVLQNIFKLQKFRPLQLETINVTMSGKEVFLVMPTGGGKSLCYQ 124
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +L
Sbjct: 125 LPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSKL 184
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K++YVTPEKI+KSK FMS+LEK + A R + I+IDE HCCSQWGHDFRPDYK LGILK Q
Sbjct: 185 KLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAIDEVHCCSQWGHDFRPDYKALGILKRQ 244
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S + I++I
Sbjct: 245 FPNTSLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDI 304
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + VH RWS N
Sbjct: 305 VKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHANMEPEDKTTVHRRWSAN 363
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+
Sbjct: 364 EIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDTKADCILYYGFGDI 423
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMVV 477
R SSMV EN G Q LY++V Y Q NI K R V+ F+++ ++ N C
Sbjct: 424 FRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWSPEECNKMCDNC 478
Query: 478 ----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-DSDLK 520
+ + + ++ +L+ ++ N++LT L+L+D K+++ I L
Sbjct: 479 CKDTSFERKNITAYCRDLVKILKQAEELNEKLTPLKLIDSWLGKGAAKLRVAGIAPPTLP 538
Query: 521 REEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ +I + L F+ I L+I
Sbjct: 539 REDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|332839802|ref|XP_520788.3| PREDICTED: ATP-dependent DNA helicase Q1 [Pan troglodytes]
gi|410267548|gb|JAA21740.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410267556|gb|JAA21744.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410267560|gb|JAA21746.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410304460|gb|JAA30830.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410304462|gb|JAA30831.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352515|gb|JAA42861.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352521|gb|JAA42864.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352523|gb|JAA42865.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352525|gb|JAA42866.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352527|gb|JAA42867.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
Length = 649
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/578 (42%), Positives = 363/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS----LLEAFEASRGSPIQYGGS 61
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L LE +A G+ +Y S
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDA--GASNEYDSS 64
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ W+ F W + D+ NVF + +R Q E IN ++G++V ++M GGGKS
Sbjct: 65 PAA----WNKEDFPWSGKVKDILQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRK 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKM 474
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C + + + ++ +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDSAFERKNITEYCRDLVKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|344266668|ref|XP_003405402.1| PREDICTED: ATP-dependent DNA helicase Q1 [Loxodonta africana]
Length = 648
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/575 (41%), Positives = 360/575 (62%), Gaps = 35/575 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSEL-KSLLEAFEASRGSPIQYGGSSST 64
+ +ELE++ E+ V QI++L +R+ +L ++++ L K + + E S +
Sbjct: 7 LTEELESITNELHAVDIQIQELTERKQELIQKKTVLTKKIKQCLEDSDAGA---SNDCDS 63
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
+ + W+ F W R DV NVF + +R+ Q E IN ++G++V ++M GGGKSLCY
Sbjct: 64 SPDTWNKEDFPWSDRVKDVLKNVFKLQKFRSLQLETINVTMAGKEVFLVMPTGGGKSLCY 123
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LG+ A ML +++SKE K+++ + +
Sbjct: 124 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGVSATMLNASSSKEHVKWVHAEMVNKNSK 183
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMSKLEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 184 LKLIYVTPEKIAKSKMFMSKLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKR 243
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S + I++
Sbjct: 244 QFPSTSLIGLTATATNHVLKDAQKILCVDKCFTFTASFNRPNLYYEVRQKPSNTEDFIED 303
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+M+ + +VH +WS
Sbjct: 304 IVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANMEPEDKTRVHRKWSA 362
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
+++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 363 SEIQVVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQESGRAGRDDVKADCILYYGFGD 422
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMV 476
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ N C
Sbjct: 423 IFRVSSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNSDACNKMCDN 477
Query: 477 V----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEI-DSDL 519
+ + + +I +L+ ++ N++LT L+L+D K+++ + L
Sbjct: 478 CCKDISFDRKNVTEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVAPPTL 537
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ ++ + L F+ I L+I
Sbjct: 538 PREDLEKIIAHFLLQQYLKEDYSFTAYATISYLKI 572
>gi|426371952|ref|XP_004052901.1| PREDICTED: ATP-dependent DNA helicase Q1 [Gorilla gorilla gorilla]
Length = 649
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/578 (42%), Positives = 362/578 (62%), Gaps = 41/578 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS----LLEAFEASRGSPIQYGGS 61
+ +EL+++ E+ V+ QI++L +RQ +L +++ L LE +A G+ +Y S
Sbjct: 7 LTEELDSITNELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDA--GASNEYDSS 64
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ W+ F W + D+ NVF + +R Q E IN ++G++V ++M GGGKS
Sbjct: 65 PAA----WNKEDFPWSGKVKDILQNVFKLEKFRLLQLETINVTMAGKEVFLVMPTGGGKS 120
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 121 LCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNK 180
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 181 NSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGI 240
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S +
Sbjct: 241 LKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDF 300
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +
Sbjct: 301 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRK 359
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYG 419
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLF 473
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N
Sbjct: 420 FGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKM 474
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EID 516
C + + + ++ +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 475 CDNCCKDSAFERKNITEYCRDLVKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVA 534
Query: 517 SDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 535 PTLPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|395538504|ref|XP_003771219.1| PREDICTED: ATP-dependent DNA helicase Q1 [Sarcophilus harrisii]
Length = 780
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/578 (42%), Positives = 368/578 (63%), Gaps = 39/578 (6%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-EAFEASRGSPIQYGGSS- 62
E+ +EL++V +E++ ++ QI++L++RQ +L +++ LK + E+ E S G SS
Sbjct: 132 ELSEELDSVTSELQAIEIQIQELLERQQELIRKKTALKKKIKESLEDSGA-----GASSE 186
Query: 63 -STAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
++ E W+ F W + D NVF + +R+ Q E IN ++G++V ++M GGGKS
Sbjct: 187 LDSSPEGWNKEDFPWSGKIKDAMQNVFKLQKFRSLQLETINVTMAGKEVFLVMPTGGGKS 246
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPAV +G LV+ PL+SL++DQ+M L LG+ A +L ++++KE K+++ +
Sbjct: 247 LCYQLPAVCSDGFTLVICPLISLMEDQLMVLEQLGVSATLLNASSTKEHVKWVHAEMVNK 306
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+LK++YVTPEKI+KSK FMS+LEK + AGR + I++DE HCCSQWGHDFRPDYK LGI
Sbjct: 307 NSKLKLIYVTPEKIAKSKMFMSRLEKAYEAGRFTRIAVDEVHCCSQWGHDFRPDYKALGI 366
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QFP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S
Sbjct: 367 LKRQFPNTSLIGLTATATNHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTDDF 426
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I++I K I Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + VH +
Sbjct: 427 IEDIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPRDKTAVHKK 485
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WS NK+QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD L ++C+L+
Sbjct: 486 WSANKIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDLKADCILYSG 545
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV-RLVIFEKLQQV------NLF 473
D+ R S+MV EN G Q LY++V Y N+ K R++I + +V N
Sbjct: 546 FGDIFRISTMVVMENVGQQKLYEMVSYCH-----NMHKCRRMLIAQHFDEVWNSAACNKM 600
Query: 474 CMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEIDS 517
C + + + +I +L+ + N++LT L+L+D K+++ ++ S
Sbjct: 601 CDNCCKDISFEKKNVTDYCRDLIKILKHAEKLNEKLTPLKLIDAWMGKGVAKLRVSDVVS 660
Query: 518 -DLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L R+E+E++++ I+ + L F+ I L+I
Sbjct: 661 PKLPRDELEKIIVHFILQQYLKEDFSFTAYATISYLKI 698
>gi|156359349|ref|XP_001624732.1| predicted protein [Nematostella vectensis]
gi|156211530|gb|EDO32632.1| predicted protein [Nematostella vectensis]
Length = 582
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/449 (50%), Positives = 311/449 (69%), Gaps = 7/449 (1%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSST 64
+ ++EL+ + E++ ++ QI+ L++RQ L R+ EL+ + A S S + S+
Sbjct: 2 DTVKELQEISEELQDIEVQIESLLERQQFLLSRKQELEVI--ALSNSNDSVLLSFSSNVA 59
Query: 65 AVE--NWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
+ +WS T F W + NVF I +R Q E INA +SG D ++IM GGGKSL
Sbjct: 60 CAQGSDWSSTAFSWSQEVEAALKNVFKIDTFRHLQLECINATMSGVDCILIMPTGGGKSL 119
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
C+QLPAV+ +G+ LVVSPL+SL++DQ+ L LGI A +L +++++E+ ++ ++ +
Sbjct: 120 CFQLPAVVSKGLTLVVSPLVSLMEDQLWALKRLGIKAALLNASSTREEVNSVHASIVDKK 179
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
+LKMLYVTPEKI+KSKRFM+KLEK + +G LS I IDE HC SQWGHDFRPDYK LGIL
Sbjct: 180 SDLKMLYVTPEKIAKSKRFMAKLEKSYESGLLSRIVIDEVHCTSQWGHDFRPDYKILGIL 239
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIR-KCIKFVSTINRPNLFYMVREKSSVGKVV 300
K Q+P VP++ LTATAT KV D+ ++L + C+ ++ NRPNLFY V+ K +
Sbjct: 240 KRQYPGVPILGLTATATTKVIEDVKKILGLHANCLLLKASFNRPNLFYEVQSKPTTNSAF 299
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+ I + I + + + +SGI+YCFSRK+ EQVA E+ RGI A YHADM +R +VHM
Sbjct: 300 MSTIHQLITKRF-SGDSGIIYCFSRKDAEQVAIEMSSRGIKAACYHADMPPESRSQVHMA 358
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W+ NKLQV+V TVAFGMGI+K +VRFVIHHS SKS+E YYQESGRAGRD + C++F+R
Sbjct: 359 WTTNKLQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGRDEKRASCIVFYR 418
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQ 449
P D+ R S+MVF E +GLQNLY IVRY Q
Sbjct: 419 PFDIFRHSTMVFTEQTGLQNLYGIVRYCQ 447
>gi|297261947|ref|XP_002798535.1| PREDICTED: ATP-dependent DNA helicase Q1 isoform 2 [Macaca mulatta]
gi|297261949|ref|XP_001094207.2| PREDICTED: ATP-dependent DNA helicase Q1 isoform 1 [Macaca mulatta]
Length = 649
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/575 (42%), Positives = 359/575 (62%), Gaps = 35/575 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-EAFEASRGSPIQYGGSSST 64
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L + + E S SS
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDAGASNEHDSSPA 66
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A W+ F W + DV NVF + +R Q E IN ++G++V ++M GGGKSLCY
Sbjct: 67 A---WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCY 123
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + E
Sbjct: 124 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSE 183
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 184 LKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKR 243
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ ++ LTATAT V D ++L + KC F ++ NR NL+Y VR+K S + I++
Sbjct: 244 QFPNASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRSNLYYEVRQKPSNTEDFIED 303
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +WS
Sbjct: 304 IVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 362
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMV 476
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 423 IFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKMCDN 477
Query: 477 V----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDL 519
+ + + +I +L+ ++ N++LT L+L+D K KL+ + L
Sbjct: 478 CCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPTL 537
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ +I + L F+ I L+I
Sbjct: 538 PREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|383420495|gb|AFH33461.1| ATP-dependent DNA helicase Q1 [Macaca mulatta]
Length = 649
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/575 (42%), Positives = 359/575 (62%), Gaps = 35/575 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-EAFEASRGSPIQYGGSSST 64
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L + + E S SS
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDAGASNEHDSSPA 66
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A W+ F W + DV NVF + +R Q E IN ++G++V ++M GGGKSLCY
Sbjct: 67 A---WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCY 123
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + E
Sbjct: 124 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSE 183
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 184 LKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKR 243
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ ++ LTATAT V D ++L + KC F ++ NR NL+Y VR+K S + I++
Sbjct: 244 QFPNASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRSNLYYEVRQKPSNTEDFIED 303
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +WS
Sbjct: 304 IVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTAVHRKWSA 362
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMV 476
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 423 IFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKMCDN 477
Query: 477 V----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDL 519
+ + + +I +L+ ++ N++LT L+L+D K KL+ + L
Sbjct: 478 CCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPTL 537
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ +I + L F+ I L+I
Sbjct: 538 PREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|355564072|gb|EHH20572.1| ATP-dependent DNA helicase Q1, partial [Macaca mulatta]
gi|355785959|gb|EHH66142.1| ATP-dependent DNA helicase Q1, partial [Macaca fascicularis]
Length = 647
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/575 (42%), Positives = 359/575 (62%), Gaps = 35/575 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-EAFEASRGSPIQYGGSSST 64
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L + + E S SS
Sbjct: 5 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDAGASNEHDSSPA 64
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A W+ F W + DV NVF + +R Q E IN ++G++V ++M GGGKSLCY
Sbjct: 65 A---WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCY 121
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + E
Sbjct: 122 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSE 181
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 182 LKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKR 241
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ ++ LTATAT V D ++L + KC F ++ NR NL+Y VR+K S + I++
Sbjct: 242 QFPNASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRSNLYYEVRQKPSNTEDFIED 301
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +WS
Sbjct: 302 IVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 360
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 361 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 420
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMV 476
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 421 IFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKMCDN 475
Query: 477 V----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDL 519
+ + + +I +L+ ++ N++LT L+L+D K KL+ + L
Sbjct: 476 CCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPTL 535
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ +I + L F+ I L+I
Sbjct: 536 PREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 570
>gi|380798559|gb|AFE71155.1| ATP-dependent DNA helicase Q1, partial [Macaca mulatta]
Length = 645
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/575 (42%), Positives = 359/575 (62%), Gaps = 35/575 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-EAFEASRGSPIQYGGSSST 64
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L + + E S SS
Sbjct: 3 LTEELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDAGASNEHDSSPA 62
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A W+ F W + DV NVF + +R Q E IN ++G++V ++M GGGKSLCY
Sbjct: 63 A---WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCY 119
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + E
Sbjct: 120 QLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSE 179
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 180 LKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKR 239
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QFP+ ++ LTATAT V D ++L + KC F ++ NR NL+Y VR+K S + I++
Sbjct: 240 QFPNASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRSNLYYEVRQKPSNTEDFIED 299
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +WS
Sbjct: 300 IVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTAVHRKWSA 358
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D
Sbjct: 359 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 418
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMV 476
+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 419 IFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKMCDN 473
Query: 477 V----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDL 519
+ + + +I +L+ ++ N++LT L+L+D K KL+ + L
Sbjct: 474 CCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPTL 533
Query: 520 KREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
RE++E+++ +I + L F+ I L+I
Sbjct: 534 PREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 568
>gi|397517493|ref|XP_003828945.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1 [Pan
paniscus]
Length = 649
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/576 (41%), Positives = 363/576 (63%), Gaps = 37/576 (6%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAF--EASRGSPIQYGGSSS 63
+ +EL+++ +E+ V+ QI++L +RQ +L +++ L ++ ++ G+ +Y S +
Sbjct: 7 LTEELDSITSELHAVEIQIQELTERQQELIQKKKXLTKKIKQCLEDSDAGASNEYDSSPA 66
Query: 64 TAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
W+ F W + D+ NVF + +R Q E IN ++G++V ++M GGGKSLC
Sbjct: 67 A----WNKEDFPWSGKVKDILQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 123 YQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEG 182
YQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 183 ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
ELK++YVTPEKI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
QFP+ ++ LTATAT V D ++L + KC F ++ NRPNL+Y VR+K S + I+
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWS 362
+I K I Y +SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +WS
Sbjct: 303 DIVKLINGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWS 361
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++
Sbjct: 362 ANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFG 421
Query: 423 DVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCM 475
D+ R SSMV EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 422 DIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKMCD 476
Query: 476 VV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSD 518
+ + + ++ +L+ ++ N++LT L+L+D K KL+ +
Sbjct: 477 NCCKDSAFERKNITEYCRDLVKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPT 536
Query: 519 LKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI 554
L RE++E+++ +I + L F+ I L+I
Sbjct: 537 LPREDLEKIIAHFLIQQYLKEDYSFTAYATISYLKI 572
>gi|390343347|ref|XP_786769.3| PREDICTED: ATP-dependent DNA helicase Q1 [Strongylocentrotus
purpuratus]
Length = 980
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/561 (43%), Positives = 348/561 (62%), Gaps = 30/561 (5%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSST 64
+I LE V E++ V++QI++L+ +Q +L +R+ +L+ + SR + S T
Sbjct: 22 DIQHGLEEVNQELQHVEKQIERLLTKQQRLLQRKEQLE-----VQTSRLHEL----SLQT 72
Query: 65 AVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
+W + + W ++ + VFGI YR Q++ +NA LSGRDV+++M GGGKSLCY
Sbjct: 73 GSTDWEKSDYPWSAKLRSLCETVFGIKKYRPLQEKTMNASLSGRDVILLMPTGGGKSLCY 132
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA++ +G LVVSPLLSL++DQ M L +G+ A +L S T E K +++ + E
Sbjct: 133 QLPALVSKGFTLVVSPLLSLMEDQTMALEEIGVNATVLNSNTPPESVKDVHRQMIDARSE 192
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK+LYVTPEKI+KSKRFM+ LEK + A L+ I+IDE HCCSQWGHDFRPDYK LG+LK
Sbjct: 193 LKLLYVTPEKIAKSKRFMACLEKAYKANLLTRIAIDEVHCCSQWGHDFRPDYKILGLLKR 252
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
QF D P++ LTATAT V +D+ +L ++ C F + NRPNLFY VR K S ++E
Sbjct: 253 QFTDTPILGLTATATMDVLDDVKGILGLQGCQVFRAGFNRPNLFYEVRPKPSKQAEFVEE 312
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
+ K I + +SGI+YCFSRK+ E +A+ L++ GI A YHA +D R +VH W +
Sbjct: 313 LIKLINGEF-KGQSGIIYCFSRKDTETMAENLKKGGIQAHPYHAMLDAQYRSQVHRNWKE 371
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N +QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD P+ C++++ D
Sbjct: 372 NNIQVVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQESGRAGRDDEPARCIVYYGIGD 431
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQ---QVNLFCMVVLAG 480
V RQS+MV E +G Q LY++V Y P + E+ + + N C V +G
Sbjct: 432 VFRQSTMVVTEQTGQQKLYNMVAYCVAPATCRRSLIGQHFGERWEGQARCNRMCDVCQSG 491
Query: 481 ----------HAQCIISLLQDIQDNNQRLTMLQLVDKM--KIKLKEIDSDLKRE----EI 524
H Q I ++L ++ R+T L+L D++ K + +D D ++ +
Sbjct: 492 AQVVEKDMLPHLQRIYTILDHKAKSDNRITALKLTDELLSKKGVAALDKDQAKKMTGRDY 551
Query: 525 EQLVLQLIIDRVLVRIGPFSP 545
E L+ +++ L F+P
Sbjct: 552 EYLIAHFLLEGYLREDFHFTP 572
>gi|355716039|gb|AES05481.1| RecQ protein-like protein [Mustela putorius furo]
Length = 592
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/506 (45%), Positives = 327/506 (64%), Gaps = 30/506 (5%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W + DV NVF + +R Q E IN +SG++V ++M GGGKSLCYQLPA+ +G
Sbjct: 18 FPWSDKVKDVLQNVFKLQKFRLLQLETINVTMSGKEVFLVMPTGGGKSLCYQLPALCSDG 77
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + +LK++YVTPE
Sbjct: 78 FTLVICPLISLMEDQLMVLKQLGISAXMLNASSSKEHVKWVHAEMVNKNSKLKLIYVTPE 137
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
KI+KSK FMS+LEK + A R + I++DE HCCS WGHDFRPDYK LGILK QFP+ +M
Sbjct: 138 KIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSHWGHDFRPDYKALGILKRQFPNTALMG 197
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTATAT V D+ ++L + KC F ++ NRPNL+Y +R+K S + + ++I K I Y
Sbjct: 198 LTATATSHVLKDVQKILCVEKCFTFTASFNRPNLYYEIRQKPSNTEDLFEDIVKLINGRY 257
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
+SGI+YCFS+K+ EQV L++ GI A YHA+M+ + VH RWS N++QV+V T
Sbjct: 258 -KGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTDVHRRWSANEIQVVVAT 316
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
VAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD L ++C+L++ D+ R SSMV
Sbjct: 317 VAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAGRDDLKADCILYYGFGDIFRISSMVV 376
Query: 433 YENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMVV-------- 477
EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 377 MENVGQQKLYEMVSYCQ-----NISKCRRVLIAQHFDEVWNSEACNKMCDNCCKNISCER 431
Query: 478 --LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKREEIEQLV 528
+ H + +I +L+ +D N++LT L+L+D K KL+ + L RE++E+++
Sbjct: 432 KNVTAHCRDLIKILKQAEDLNEKLTPLKLIDSWMGKGAAKLRVAGVVPPKLPREDLEKII 491
Query: 529 LQLIIDRVLVRIGPFSPGKKIIKLEI 554
L++ + L F+ I L+I
Sbjct: 492 AHLLLQQYLKEDYSFTAYATISYLKI 517
>gi|242022338|ref|XP_002431597.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
gi|212516905|gb|EEB18859.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
Length = 652
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/544 (44%), Positives = 338/544 (62%), Gaps = 26/544 (4%)
Query: 14 EAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVENWS-GT 72
E E++ + ++IKQL D + K LL +A I S A +NWS T
Sbjct: 8 EDEIKAIDDEIKQL----DAKISKLKTQKELLVDRKAKIKELILKKKSEKLASKNWSLKT 63
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W + D++ F I +R Q E+INA LS DV++IM GGGKSLCYQLPA++ +G
Sbjct: 64 FPWSQKVDNLLKENFKISEFRPFQLEVINATLSKEDVILIMPTGGGKSLCYQLPALVDKG 123
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
I LVVSPL+SL++DQVM L + PA ML++ +SKED K + AL+ + K++YVTPE
Sbjct: 124 ITLVVSPLVSLMEDQVMALKKINYPALMLSANSSKEDVKLVTAALQDSCPKHKLIYVTPE 183
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
K++KSKRFMS+L+KCH GR + ++IDE HCCS WGHDFRPDY LGILK FP VP++
Sbjct: 184 KLAKSKRFMSQLQKCHQQGRFTRLAIDEVHCCSTWGHDFRPDYNYLGILKDMFPGVPLLG 243
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTAT+T KV D+ +ML+I+ C+ +T NRPNL+Y V K S +D + +++ +
Sbjct: 244 LTATSTSKVTADVQKMLNIQGCLVIKATFNRPNLYYEVVLKPSSQSENLDLLENWLKNKF 303
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
N +SGI+Y + KECE++ +ELR+RGI A YHA +D R K+H +W N+ QVIV T
Sbjct: 304 SN-KSGIIYTTAIKECEELTKELRKRGIKAGVYHAMLDAEVRSKMHTKWMSNEYQVIVAT 362
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
VAFGMGI+KPDVRFVIHHSLSKS+E +YQESGRAGRDG S C++ FR ADV + S+MVF
Sbjct: 363 VAFGMGIDKPDVRFVIHHSLSKSMENFYQESGRAGRDGKNSHCIVMFRLADVFKLSTMVF 422
Query: 433 YENSGLQNLY---------DIVRYSQYPLH----WNIEKVRLVIFEKLQQVNLFCMVVLA 479
+ GL+NLY D R S H WN + ++ N F + +
Sbjct: 423 TQQKGLENLYSMLNFCLNNDTCRRSLIAEHFDEVWNSNFCNKMCDHCKEEPN-FKEIDIT 481
Query: 480 GHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEIDSDLKREEIEQLVLQLII 533
+ I +++ +N ++T L+L++ KI++ ++ + R E+++ L+
Sbjct: 482 SACRDIYKIIERALENEIKVTALKLIEAWYGKGDAKIRVADVKCNFDRTTAEKIIGYLLS 541
Query: 534 DRVL 537
R L
Sbjct: 542 MRYL 545
>gi|148226526|ref|NP_001089858.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus laevis]
gi|80476410|gb|AAI08556.1| MGC131022 protein [Xenopus laevis]
Length = 652
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/551 (42%), Positives = 351/551 (63%), Gaps = 33/551 (5%)
Query: 12 NVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVENWSG 71
+V E++ V+ Q+++L++RQ +L R++ L ++ + + GG ENW
Sbjct: 15 SVSGELQAVEIQLQELLERQQELIHRKNLLNKKIQRLSENAEAGSSAGGGD--CAENWRN 72
Query: 72 -TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR 130
F W + + F + +R+ Q E INA +SGRDV +IM GGGKSLCYQLPA+
Sbjct: 73 EDFLWSQKIRRALSDSFQLQTFRSLQLETINATMSGRDVFLIMPTGGGKSLCYQLPALCS 132
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVT 190
+G LV+ PL+SL++DQ+M L LG+ A L +++SKE K+++ + + +LK+LYVT
Sbjct: 133 DGFTLVICPLISLMEDQLMVLNRLGVSATSLNASSSKEHVKWVHGEMMNKKSQLKLLYVT 192
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPM 250
PEK++KSK FMS+LEK + G L+ +++DE HCCSQWGHDFRPDYK LGILK QFP+ P+
Sbjct: 193 PEKVAKSKVFMSRLEKAYQGGLLARVAVDEVHCCSQWGHDFRPDYKTLGILKRQFPNSPL 252
Query: 251 MALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQE 310
+ LTATAT V D ++L ++K + F ++ NRPNLFY VR K S + I +I K I
Sbjct: 253 IGLTATATSHVLKDAQKILCVQKPLTFTASFNRPNLFYEVRLKPSSSEDFIADITKLINS 312
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIV 370
Y +SGI+YCFS+K+ EQV L++ GI A YHA+M+ + KVH +W+ N++Q++V
Sbjct: 313 RY-KGQSGIIYCFSQKDSEQVTMSLQKLGIRAGAYHANMEPRDKSKVHTKWTANEIQIVV 371
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSM 430
TVAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD ++C+L++ D+ R SSM
Sbjct: 372 ATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRISSM 431
Query: 431 VFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFC--------- 474
V EN G Q LY++V+YSQ N+ + R V+ F+++ + N C
Sbjct: 432 VVMENVGQQKLYEMVKYSQ-----NLNRCRRVLIAQHFDEVWDSAKCNKMCDNCNSEGAC 486
Query: 475 -MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKLKEID-SDLKREEIEQ 526
++ + + I+ +++ +++LT L+L+D K+++ + L R EIE+
Sbjct: 487 EEADISQYCRDIVKIVEQADRMDEKLTPLKLIDSWVGKGAPKLRVPGVQPPKLLRHEIER 546
Query: 527 LVLQLIIDRVL 537
++ LI+ + L
Sbjct: 547 IIAHLILQQFL 557
>gi|159465525|ref|XP_001690973.1| hypothetical protein CHLREDRAFT_128016 [Chlamydomonas reinhardtii]
gi|158279659|gb|EDP05419.1| predicted protein [Chlamydomonas reinhardtii]
Length = 489
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 306/469 (65%), Gaps = 13/469 (2%)
Query: 80 DDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSP 139
D +VFG+ YR Q+E++NA + GRDVL ++ +GGGKSLCYQLPA+LR G+ LVVSP
Sbjct: 2 DSTLRDVFGLHDYRPLQREVMNASMQGRDVLCLLPSGGGKSLCYQLPALLRPGLTLVVSP 61
Query: 140 LLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKR 199
LL+LIQDQV+ L AL I LTS +SKED +Y +++G+ LK+LYVTPEKI SKR
Sbjct: 62 LLALIQDQVLSLRALSIDGACLTSLSSKEDVADVYSRMDRGQ--LKLLYVTPEKIVSSKR 119
Query: 200 FMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQ 259
FMSKLEK H AGRL I+IDEAHC SQWG+DFRPDYK LGILK QFP VP++ALTATAT
Sbjct: 120 FMSKLEKAHQAGRLDRIAIDEAHCASQWGNDFRPDYKKLGILKQQFPQVPILALTATATH 179
Query: 260 KVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGI 319
+V DL +L I+ C F +++NRPNLFY VR K + + I +I+E YP ESGI
Sbjct: 180 QVCEDLKAILRIQGCEFFRASVNRPNLFYEVRPKPAAAADMTAAIVAWIREHYPRGESGI 239
Query: 320 VYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
VYC +RK+CE +A +L GI A +YHADM+ RE H WS ++QV+V T+AFGMGI
Sbjct: 240 VYCLTRKDCEALAADLAAAGIRARHYHADMEPGPREAAHTAWSAGRVQVMVATIAFGMGI 299
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
NKPDVRFVIHHSLSKSVE YYQESGRAGRDGLP+ CLLF+R A R S G
Sbjct: 300 NKPDVRFVIHHSLSKSVENYYQESGRAGRDGLPARCLLFYRCAATSRPSPTTLLTCGGGG 359
Query: 440 NLYD-------IVR-YSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQCIISLLQD 491
+L+ I R +++ P + L HA I+++L+
Sbjct: 360 HLHQAGCRRALIHRHFAEAPSDCRGMCDNCCAAAAVGPAGAPPPRDLTQHAVAILAILRQ 419
Query: 492 IQDNNQRLTMLQLVDKMKIKLKEIDSD---LKREEIEQLVLQLIIDRVL 537
Q ++ T+LQLV+ + + + + L R++ E +V L+ + +L
Sbjct: 420 QQAKEKKATLLQLVELWRKEPGPLGKEAKALSRDDNEAVVAALVYEGLL 468
>gi|302832866|ref|XP_002947997.1| hypothetical protein VOLCADRAFT_57553 [Volvox carteri f.
nagariensis]
gi|300266799|gb|EFJ50985.1| hypothetical protein VOLCADRAFT_57553 [Volvox carteri f.
nagariensis]
Length = 646
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/504 (47%), Positives = 316/504 (62%), Gaps = 42/504 (8%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W ++ + +VFG+ +RA Q+E++NA L GRDVL ++ +GGGKSLCYQLPA++ G
Sbjct: 34 FPWSAKLNQTLHDVFGLREFRALQREVMNAALQGRDVLCLLPSGGGKSLCYQLPALVSPG 93
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
+ LVVSPLLSLIQDQV+ L AL I LTS +SKE+ +Y +E+GE LK+LYVTPE
Sbjct: 94 LTLVVSPLLSLIQDQVLSLRALSINGSCLTSLSSKEEVAEVYGKMERGE--LKLLYVTPE 151
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
KI SKRFMSKLEK H GRL I+IDEAHC S WG+DFRPDYK LG+LK QFP VP++A
Sbjct: 152 KIVSSKRFMSKLEKVHQGGRLDRIAIDEAHCASAWGNDFRPDYKKLGVLKQQFPQVPIIA 211
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTATAT +V DL +L I+ C F +++NRPNLFY V K + I I +I Y
Sbjct: 212 LTATATHQVCKDLKSILRIQGCEFFRASVNRPNLFYEVLPKPAAAADAIAAIVAWIHRHY 271
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
P ESGIVYC +RK+CE VA EL G+SA +YHADM+ RE H WS K+QV+V T
Sbjct: 272 PRGESGIVYCLTRKDCETVASELAAGGVSARHYHADMEPGPREAAHAAWSAGKVQVMVAT 331
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQ------ESGRAGRDGLPSECLLFFRPADVPR 426
VAFGMGINKPDVRFV+HHSLSKS+E YYQ ESGRAGRDGLP+ CL+F+R +D R
Sbjct: 332 VAFGMGINKPDVRFVVHHSLSKSLENYYQAGSRLIESGRAGRDGLPARCLMFYRFSDALR 391
Query: 427 QSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV---------RLVIFEKLQQVNLFCMVV 477
Q+++V +E + NL ++ Y+ + + R +I + C +
Sbjct: 392 QAAIVCFEPTWEANLNAMMLYAAAAVPGSGSGDSGDGGSSCRRAIIQRHFAEAPAECRCM 451
Query: 478 -------------------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIK-----LK 513
+ HA+ ++ +L+ Q ++ T++QLVD + K
Sbjct: 452 CDNCCAAAAAGPAAAAPRDVGRHARAVLEILRQQQAKEKKATLIQLVDLWRSSKDPGVAK 511
Query: 514 EIDSDLKREEIEQLVLQLIIDRVL 537
E + + R+E E ++ + R+L
Sbjct: 512 EAKT-MSRDENEAVIAAMTYARLL 534
>gi|151568124|pdb|2V1X|A Chain A, Crystal Structure Of Human Recq-Like Dna Helicase
gi|151568125|pdb|2V1X|B Chain B, Crystal Structure Of Human Recq-Like Dna Helicase
gi|282403581|pdb|2WWY|A Chain A, Structure Of Human Recq-Like Helicase In Complex With A
Dna Substrate
gi|282403582|pdb|2WWY|B Chain B, Structure Of Human Recq-Like Helicase In Complex With A
Dna Substrate
Length = 591
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/506 (45%), Positives = 325/506 (64%), Gaps = 30/506 (5%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W + D+ NVF + +R Q E IN ++G++V ++M GGGKSLCYQLPA+ +G
Sbjct: 26 FPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCSDG 85
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
LV+ PL+SL++DQ+M L LGI A ML +++SKE K+++ + ELK++YVTPE
Sbjct: 86 FTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLIYVTPE 145
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
KI+KSK FMS+LEK + A R + I++DE HCCSQWGHDFRPDYK LGILK QFP+ ++
Sbjct: 146 KIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNASLIG 205
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTATAT V D ++L I KC F ++ NRPNL+Y VR+K S + I++I K I Y
Sbjct: 206 LTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRY 265
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
+SGI+YCFS+K+ EQV L+ GI A YHA+++ + VH +WS N++QV+V T
Sbjct: 266 -KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVAT 324
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
VAFGMGI+KPDVRFVIHHS+SKS+E YYQESGRAGRD + ++C+L++ D+ R SSMV
Sbjct: 325 VAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRISSMVV 384
Query: 433 YENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVNLFCMVV-------- 477
EN G Q LY++V Y Q NI K R V+ F+++ + N C
Sbjct: 385 MENVGQQKLYEMVSYCQ-----NISKCRRVLMAQHFDEVWNSEACNKMCDNCCKDSAFER 439
Query: 478 --LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK---EIDSDLKREEIEQLV 528
+ + + +I +L+ ++ N++LT L+L+D K KL+ + L RE++E+++
Sbjct: 440 KNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPTLPREDLEKII 499
Query: 529 LQLIIDRVLVRIGPFSPGKKIIKLEI 554
+I + L F+ I L+I
Sbjct: 500 AHFLIQQYLKEDYSFTAYATISYLKI 525
>gi|307105709|gb|EFN53957.1| hypothetical protein CHLNCDRAFT_25381, partial [Chlorella
variabilis]
Length = 498
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/439 (51%), Positives = 297/439 (67%), Gaps = 22/439 (5%)
Query: 20 VQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVENWSGTFEWDSRA 79
V+ QI+ L+ RQ L E++ L+ + A + +W GTF WD R
Sbjct: 50 VEAQIEHLLSRQAALQEQRERLQRMRAA-------------EARAPRADWLGTFAWDGRV 96
Query: 80 DDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-EGIALVVS 138
+ +VFG+ ++R Q+E+INA L GRDVL +M +GGGKSLCYQLPA+L G+ LVVS
Sbjct: 97 QQLLGDVFGLRSFRPLQREVINATLQGRDVLCLMPSGGGKSLCYQLPALLSGSGLTLVVS 156
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE------GELKMLYVTPE 192
PLLSLIQDQV+ L+ LG+ A LTS TSKE+ I K G G L++LY TPE
Sbjct: 157 PLLSLIQDQVLGLSELGVQAAALTSLTSKEEAASISKQAGTGSKAAVSLGGLRLLYCTPE 216
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
K++ SKRF +KLEK + AGRL+ I++DEAHCCSQWG+DFRPDYK LGILK QFPD P++A
Sbjct: 217 KVASSKRFFTKLEKVYKAGRLTRIAVDEAHCCSQWGNDFRPDYKKLGILKQQFPDTPLIA 276
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTATATQ V DL +L I C F S+INRPNLFY VR+K + K ++ E+A +IQ +Y
Sbjct: 277 LTATATQAVCQDLRTILKIEGCELFKSSINRPNLFYEVRQKPAKEKELVAEMAAWIQGNY 336
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
P +SGI+Y +RK+ E +A ELR G+S YHADM+ RE+VH++WS+ ++QVIV T
Sbjct: 337 PAGDSGIIYVLTRKDAESLADELRGAGVSCQGYHADMEPARRERVHLQWSQGRVQVIVAT 396
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
+AFGMGIN P VRFVIHH+L + ESGRAGRDGLP+ C L++R D RQ+++V
Sbjct: 397 IAFGMGINNPHVRFVIHHTLRQGRPR--AESGRAGRDGLPAHCRLYYRFGDYLRQAAVVT 454
Query: 433 YENSGLQNLYDIVRYSQYP 451
E++ L +++Y+ P
Sbjct: 455 MESNWEPCLKGMLQYAAAP 473
>gi|198429056|ref|XP_002130932.1| PREDICTED: similar to MGC131022 protein [Ciona intestinalis]
Length = 652
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/440 (48%), Positives = 299/440 (67%), Gaps = 9/440 (2%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
EL V A + +Q +++ L+ +Q+ L ER+S+L+S + + S V N
Sbjct: 10 ELSQVTASLNKIQTELQALLHKQENLQERKSQLESEINRRRSC-------SSSKDEEVTN 62
Query: 69 WSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS F W + + F + +R+ Q E INA LSGRDV++IM+ GGGKSL YQLPA
Sbjct: 63 WSSEDFPWSKSVRSILKSTFRMDDFRSKQLEAINATLSGRDVILIMSTGGGKSLTYQLPA 122
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ +GI +V+SPL+SL++DQ++ L GI A +L + ++K++ K +++++ ++L
Sbjct: 123 LVGKGITVVISPLVSLMEDQIISLNRFGIEAKLLNAASTKDEVKHVHQSMTSQSPSFRLL 182
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEKISKSKRFM++LEKC+ + L+ I+IDE HC SQWG+DFRPDYK LGILK QFP
Sbjct: 183 YVTPEKISKSKRFMAQLEKCYKSVNLNRIAIDEVHCASQWGNDFRPDYKILGILKRQFPK 242
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P++ LTAT+T KV D +ML+I + F + ++R NLFY VREK + VI +I +
Sbjct: 243 SPIIGLTATSTDKVTEDTKKMLNIPFALVFKTALDRRNLFYQVREKPNTNDDVIKDIVQL 302
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I ++ N + GI+YCFSRK C +VA L +RGI + YHA + + + KVH WS N +Q
Sbjct: 303 INSNFKN-QPGIIYCFSRKNCAEVASSLNKRGIKSSEYHAQLTPDDKTKVHHMWSDNNIQ 361
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VI T+AFGMGI+KP+VRFVIHHS+SKSVE YYQESGRAGRDG P+ CLL+F DV +Q
Sbjct: 362 VICATIAFGMGIDKPNVRFVIHHSMSKSVENYYQESGRAGRDGSPALCLLYFGFTDVFKQ 421
Query: 428 SSMVFYENSGLQNLYDIVRY 447
S+MV E +GL NL +++Y
Sbjct: 422 STMVMTERTGLDNLNQMIKY 441
>gi|148540131|ref|NP_001038561.2| ATP-dependent DNA helicase Q1 [Danio rerio]
gi|71679679|gb|AAI00013.1| RecQ protein-like (DNA helicase Q1-like) [Danio rerio]
Length = 639
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/574 (41%), Positives = 354/574 (61%), Gaps = 52/574 (9%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVE 67
+EL++VEAE+ +V+ QI +L+++Q +L R+++L +LE S Q GS T
Sbjct: 9 EELDSVEAELEMVELQISELLEKQTRLNSRKNKLLKVLEG----ACSSAQPSGSGKTPKS 64
Query: 68 NWS---------GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
++S F W N+F + +R Q+ IN +SG+D+ ++M G G
Sbjct: 65 SFSKQDLQHYEDSDFSWSKEVQVNLCNIFQLSKFRPLQRAAINLSMSGKDLFLVMPTGRG 124
Query: 119 KSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
KSLCYQLPA+ +G LV++PL+SL++DQ+M L ++ +PA L +++SKED K I +
Sbjct: 125 KSLCYQLPALCSKGFTLVIAPLVSLMEDQLMYLQSVNVPAVTLNASSSKEDSKRILAGMT 184
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
K+LYVTPEKI+KSK MSKLEK + G L+ I++DE HCCSQWGHDFRPDYK L
Sbjct: 185 DKNSPFKLLYVTPEKIAKSKLLMSKLEKAFNMGLLARIAVDEVHCCSQWGHDFRPDYKLL 244
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
GILK QFP+VP++ LTATAT V D ++L +++ + + NRPNL+Y VR K + +
Sbjct: 245 GILKRQFPNVPLIGLTATATSNVLKDCQKILCVQEPVTLTAPFNRPNLYYEVRFKDN--E 302
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
D+IA I+ Y N +SGIVY FS+K+ E VA EL++R I A YHA+M+ + + VH
Sbjct: 303 DCTDQIASLIRGRYKN-QSGIVYVFSQKDAEVVATELQKRDIVAQPYHANMEPSHKSLVH 361
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
RWS K+QV+V TVAFGMGI+K DVRFVIHH++SKS+E YYQESGRAGRD P++C++F
Sbjct: 362 QRWSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDSPADCIVF 421
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI----FEKL---QQVN 471
F D+ R S+MV EN+G Q L+++V Y Q N+++ R + F+++ ++ N
Sbjct: 422 FGFMDIFRISTMVVMENTGQQKLHNMVAYCQ-----NVDRCRRAMMAIHFDEVWNDEECN 476
Query: 472 LFCMVVLAG----------HAQCIISLLQDIQDNNQRLTMLQLVD----------KMKIK 511
C V G HA+ ++ +++ +++LT L++ D + IK
Sbjct: 477 EMCDVCRHGNDYITMDITQHARDVLHIVELASSMDEKLTPLKVCDAWLGKGPAKQRKMIK 536
Query: 512 LKEIDSDLKREEIEQLVLQLIIDRVLVRIGPFSP 545
L + L R E+E +++ L++ F+P
Sbjct: 537 L----TSLSRLEVESVIIHLLLHGYFSEDFSFTP 566
>gi|56207957|emb|CAI21096.1| novel protein similar to vertebrate RecQ protein-like DNA helicase
Q1-like (RECQL) [Danio rerio]
Length = 639
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/570 (41%), Positives = 351/570 (61%), Gaps = 44/570 (7%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVE 67
+EL++VEAE+ +V+ QI +L+++Q +L R+++L +LE S Q GS T
Sbjct: 9 EELDSVEAELEMVELQISELLEKQTRLNSRKNKLLKVLEG----ACSSAQPSGSGKTPKS 64
Query: 68 NWS---------GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
++S F W N+F + +R Q+ IN +SG+D+ ++M G G
Sbjct: 65 SFSKQDLQHYEDSDFSWSKEVQVNLCNIFQLSKFRPLQRAAINLSMSGKDLFLVMPTGRG 124
Query: 119 KSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
KSLCYQLPA+ +G LV++PL+SL++DQ+M L ++ +PA L +++SKED K I +
Sbjct: 125 KSLCYQLPALCSKGFTLVIAPLVSLMEDQLMYLQSVNVPAVTLNASSSKEDSKRILAGMT 184
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
K+LYVTPEKI+KSK MSKLEK + G L+ I++DE HCCSQWGHDFRPDYK L
Sbjct: 185 DKNSPFKLLYVTPEKIAKSKLLMSKLEKAFNMGLLARIAVDEVHCCSQWGHDFRPDYKLL 244
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
GILK QFP+VP++ LTATAT V D ++L +++ + + NRPNL+Y VR K + +
Sbjct: 245 GILKRQFPNVPLIGLTATATSNVLKDCQKILCVQEPVTLTAPFNRPNLYYEVRFKDN--E 302
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
D+IA I+ Y N +SGIVY FS+K+ E VA EL++R I A YHA+M+ + + VH
Sbjct: 303 DCTDQIASLIRGRYKN-QSGIVYVFSQKDAEVVATELQKRDIVAQPYHANMEPSHKSLVH 361
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
RWS K+QV+V TVAFGMGI+K DVRFVIHH++SKS+E YYQESGRAGRD P++C++F
Sbjct: 362 QRWSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDSPADCIVF 421
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRYSQ---------YPLH----WNIEKVRLVIFE 465
F D+ R S+MV EN+G Q L+++V Y Q +H WN E+ + +
Sbjct: 422 FGFMDIFRISTMVVMENTGQQKLHNMVAYCQNSSRCRRAMMAIHFDEVWNDEECNEMC-D 480
Query: 466 KLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD----------KMKIKLKEI 515
+ N + + + HA+ ++ +++ +++LT L++ D + IKL
Sbjct: 481 VCRHGNDYITMDITQHARDVLHIVELASSMDEKLTPLKVCDAWLGKGPAKQRKMIKL--- 537
Query: 516 DSDLKREEIEQLVLQLIIDRVLVRIGPFSP 545
+ L R E+E +++ L++ F+P
Sbjct: 538 -TSLSRLEVESVIIHLLLHGYFSEDFSFTP 566
>gi|321475158|gb|EFX86121.1| RecQ1-like protein [Daphnia pulex]
Length = 624
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/611 (38%), Positives = 366/611 (59%), Gaps = 54/611 (8%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVE 67
+EL ++AE+R+V+E I +L +R+ L +R+ LK +A E + + A +
Sbjct: 8 KELNKIDAELRIVEEDIDKLQERKTTLLKRKQALKE--KANEEA---------TKKLASQ 56
Query: 68 NW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLP 126
+W S F W + + F I +R Q +NA L G DV++IM GGGKSLCYQLP
Sbjct: 57 DWESNDFPWTKKLYQTLKDAFHIEKFRPMQLSAMNATLKGHDVILIMPTGGGKSLCYQLP 116
Query: 127 AVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKM 186
A++ +GI LV++PL+SL++DQ+ L LGI A L +++SKE+ ++ A+ + LK+
Sbjct: 117 ALVSDGITLVITPLVSLMEDQLASLEKLGIEAAKLNASSSKEEVNMVHLAMTDAKSSLKL 176
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPEK++KSKRFM+KL+K + R + +++DE HCCSQWGHDFRPDYK LG+L++ FP
Sbjct: 177 LYVTPEKLAKSKRFMTKLQKMYQIKRFACVAVDEVHCCSQWGHDFRPDYKYLGVLRSLFP 236
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP++ LTATAT V ND+ +ML+++ + F ++ NRPNL+Y VR K S K IDE+ +
Sbjct: 237 TVPIVGLTATATLNVTNDVQKMLNMKNSLVFKASFNRPNLYYEVRIKPSTQKECIDELVQ 296
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
+ + + +SGI+Y S K+C+Q+A ELRQ+ YHA ++ R +VH W +N+
Sbjct: 297 LLTNRF-HGQSGIIYTTSVKDCDQLASELRQQKCRVASYHASLEPADRTEVHTGWRENRY 355
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
Q +V T+AFGMGI+KPDVRFVIHHS+SKS+E +YQESGRAGRD L + C++++R +D+ R
Sbjct: 356 QAVVATIAFGMGIDKPDVRFVIHHSISKSMENFYQESGRAGRDDLQACCIVYWRLSDLFR 415
Query: 427 QSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQ--QVNLFC---------- 474
S+MVF E +GL+NLY + Y P E + E+ + N C
Sbjct: 416 LSTMVFTEQTGLRNLYAMAAYCLDPERCRREIIASHFDERWESSSCNKMCDHCSKDSTSA 475
Query: 475 MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD------KMKIKLKEID--SDLKREEIEQ 526
+ + H + +L+ ++ R+T +L+D ++ ++L + + L R++ E
Sbjct: 476 EINIVEHLTTLRQILERAEEQQVRVTAQKLIDAWQNTGQVSLRLPDFKKAAKLPRDKCES 535
Query: 527 LVLQLIIDRVLVRIGPFSPGKKI-----------------IKLEISSV----QKNTADNK 565
++ +++ L F+P I +K+E SSV + +++ K
Sbjct: 536 ILAHFLLEGYLKEDFHFTPYSTISYLLLGERAHFINKEITMKVEASSVDEAEKASSSRGK 595
Query: 566 KSTKRSLTSSA 576
+ K+S T SA
Sbjct: 596 TTRKQSTTHSA 606
>gi|308481757|ref|XP_003103083.1| hypothetical protein CRE_25739 [Caenorhabditis remanei]
gi|308260459|gb|EFP04412.1| hypothetical protein CRE_25739 [Caenorhabditis remanei]
Length = 630
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/441 (47%), Positives = 298/441 (67%), Gaps = 11/441 (2%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
EL +++ ++ + +QI QL ++ +L +++ ++ +E ++ S ++
Sbjct: 12 ELADLDGQIGQIDQQISQLRRKKAELTQKKQAIERKIE---------LKTNEDSDVVLDR 62
Query: 69 WS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
W F W A+D+ N F + +R Q+ INAV+S D +VI++ GGGKSLCYQLPA
Sbjct: 63 WDRDGFSWSQEANDILRNKFHLETFRPLQRAAINAVMSKEDAIVILSTGGGKSLCYQLPA 122
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
+L +G+ LVVSPL+SL++DQ++ L LGI A L + TSKE+ K + +A+ + + E ++L
Sbjct: 123 LLAKGLTLVVSPLVSLVEDQILQLRKLGIDASSLNANTSKEEAKRVEEAITRNDSEFRLL 182
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KSKR M+KLEK G L LI+IDE HCCSQWGHDFR DY L +LK QF
Sbjct: 183 YVTPEKLAKSKRMMNKLEKSLAVGFLKLIAIDEVHCCSQWGHDFRTDYGFLNVLKRQFKG 242
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP++ LTATAT V +D+ +ML I+ + F + NR NL Y V K ++EIA
Sbjct: 243 VPILGLTATATSNVLDDVKDMLGIQAALVFRAGFNRSNLKYQVLPKKGNEDECVEEIAAI 302
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I++ + + E+GI+YC SR +CE+VA+ L+ + I A +YHA M+ N R H W K+Q
Sbjct: 303 IKKRF-SGETGIIYCLSRNDCEKVAKSLKAQVIRAKHYHAYMEPNDRSACHQSWISGKIQ 361
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV TVAFGMGI+KPDVRFVIHHSL KS+E YYQESGRAGRDG P+ C+L++R AD+ +Q
Sbjct: 362 VIVATVAFGMGIDKPDVRFVIHHSLPKSIENYYQESGRAGRDGRPATCILYYRLADIFKQ 421
Query: 428 SSMVFYENSGLQNLYDIVRYS 448
SSMV E +G+ NLY+IVRY+
Sbjct: 422 SSMVQQERTGIANLYNIVRYA 442
>gi|384252651|gb|EIE26127.1| ATP-dependent DNA helicase [Coccomyxa subellipsoidea C-169]
Length = 517
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/467 (46%), Positives = 304/467 (65%), Gaps = 17/467 (3%)
Query: 84 LNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSL 143
++V A R +Q EIINA L GRDVL +M GGGKSLCYQLPA++ G+ LVVSPLLSL
Sbjct: 5 ISVLTCLACRPHQHEIINATLQGRDVLCLMPTGGGKSLCYQLPALISGGLTLVVSPLLSL 64
Query: 144 IQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSK 203
I DQV+ L +LGIP L+S T KE+ YK ++ + +++ +YVTPE++ +KRFMSK
Sbjct: 65 IHDQVLGLRSLGIPVISLSSLTPKEEITAAYKQMDS-DTDIRFVYVTPERVVSAKRFMSK 123
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
LEK + AGRL+ I+IDEAHCCSQWG+DFRPDYK LG+LK QFP+VP++ALTATAT V
Sbjct: 124 LEKLYKAGRLTRIAIDEAHCCSQWGNDFRPDYKKLGVLKQQFPEVPILALTATATDLVCQ 183
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
+ ++L I C F S+++RPNL++ VR+K + + V ++ +I+ +Y ++ GIVYC
Sbjct: 184 SIKDILRISACEFFRSSVDRPNLYWTVRQKPAKAEDVTADMIAWIRGNYRLTDCGIVYCQ 243
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
+RKE E +A ELRQ+G+ A YHADM RE VH +WS ++Q+ V TVAFGMGINKPD
Sbjct: 244 TRKESESLAAELRQQGMRAACYHADMAAGVREAVHSQWSAGEVQICVATVAFGMGINKPD 303
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYD 443
VRFVIHHSLSKSVE YYQE+GRAGRDG + C+L++R AD +Q++MV +E Q L
Sbjct: 304 VRFVIHHSLSKSVENYYQEAGRAGRDGERAVCMLYYRFADALKQAAMVSFEPGWEQRLGA 363
Query: 444 IVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQCIIS-------------LLQ 490
I+RY+ + E + + C + + L
Sbjct: 364 IMRYAAASSTCRRSLISRHFGEAPAKCHAMCDCCAQAGSGAVAERRGVTDAAAAVARTLA 423
Query: 491 DIQDNNQRLTMLQLVDKM---KIKLKEIDSDLKREEIEQLVLQLIID 534
D +R T+LQL+D+ K + +I + R++ E+++ Q++ D
Sbjct: 424 DWPAAEKRATLLQLIDRWRASKARYAKIGKGMSRDDNERVIAQMVYD 470
>gi|149049047|gb|EDM01501.1| rCG29929, isoform CRA_a [Rattus norvegicus]
Length = 542
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/521 (44%), Positives = 332/521 (63%), Gaps = 41/521 (7%)
Query: 104 LSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTS 163
++ +D+ ++M GGGKSLCYQLPA+ +G LV+ PL+SL++DQ+M L LGI A ML S
Sbjct: 1 MARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNS 60
Query: 164 TTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHC 223
++SKE K ++ + LK++YVTPEKI+KSK FMS+LEK + AGRL+ +++DE HC
Sbjct: 61 SSSKEHVKCVHTEMMNKNSHLKLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHC 120
Query: 224 CSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINR 283
CSQWGHDFRPDYK LGILK QFP++ ++ LTATAT V D ++L + KC+ F ++ NR
Sbjct: 121 CSQWGHDFRPDYKALGILKRQFPNISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNR 180
Query: 284 PNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISAD 343
PNL+Y VR+K S + I+ IA I Y +SGI+YCFS+K+ EQV L++ G+ A
Sbjct: 181 PNLYYEVRQKPSSAEDFIENIANLINGRY-KGKSGIIYCFSQKDSEQVTISLQKLGVRAG 239
Query: 344 YYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQES 403
YHA+M+ R KVH +WS N+LQV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YYQES
Sbjct: 240 TYHANMEPEDRTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQES 299
Query: 404 GRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV-RLV 462
GRAGRD ++C+L++ D+ R SSMV EN G Q LY++V Y Q NI K R +
Sbjct: 300 GRAGRDDWRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCRRAL 354
Query: 463 IFEKLQQV------NLFCMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQLVD 506
I + +V N C + H Q +I +L+ + N++LT L+L+D
Sbjct: 355 IAQHFDEVWNADACNKMCDNCCKDDSFEKKNITEHCQALIKILKQAEGLNEKLTPLKLID 414
Query: 507 --------KMKIKLKEIDSDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKIIKLEI---S 555
K ++ + + L RE++E++++ ++ + L F+ I L++ +
Sbjct: 415 AWMGKGAAKFRVAGVAVPA-LPREDLEKIIVHALLQQYLKEDYSFTAYATISYLKVGPRA 473
Query: 556 SVQKN-----TADNKKSTKRSLTSSALE-FELDELRKELAS 590
S+ N T K+ST+ S+ +++ E E+D KE +S
Sbjct: 474 SLLSNEGHAVTMQVKRSTQSSVRAASPEACEVDSKGKEKSS 514
>gi|261335969|emb|CBH09254.1| putative RecQ Helicase [Heliconius melpomene]
Length = 632
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/447 (45%), Positives = 296/447 (66%), Gaps = 11/447 (2%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
M+ E++ E+ V+ ++ + ++I +L ++Q +L ER++ L + + + S + + G
Sbjct: 1 MKIEDLEDEIAEVDKDLAQIDKEILKLRNKQRELNERKTSLTNSIHKIKLISLSRVDWDG 60
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ +EW + +VF I A+R Q INA LSG+ +V+M G GKS
Sbjct: 61 N----------VYEWSDKVKKTLKDVFKIEAFRPKQLSAINATLSGQHTIVVMPTGAGKS 110
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+++ G+ +V+SPL+SL++DQV L IPA ++TST+SKE+ AL+
Sbjct: 111 LCYQLPAIVKPGLTIVISPLVSLMEDQVRSLKNKDIPAMLMTSTSSKEETSTALNALKDK 170
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
++K+LYVTPE+++KSKRFM+ L+KC GRL I+IDE HCCSQWGHDFRPDYK LGI
Sbjct: 171 TTKIKLLYVTPERLAKSKRFMANLQKCFAEGRLQRIAIDEVHCCSQWGHDFRPDYKYLGI 230
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
L FP++P++ LTATAT V +D+ +ML I+ C+ ST NRPNL+Y + EK + +
Sbjct: 231 LTNMFPNIPILGLTATATAHVLSDVQKMLSIQGCLVIKSTFNRPNLYYKILEKPTSQEDC 290
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+ + K ++ Y ESGI+Y S K+ E +A L++RG+ YYHA M+ +R VHM+
Sbjct: 291 LSILEKLLKYRY-RGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHATMEAKSRSDVHMK 349
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W + Q IV TVAFGMGI+KPDVRFVIHH++SKS+E YYQESGRAGRDG +EC+ +R
Sbjct: 350 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDGQRAECVTLYR 409
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRY 447
D+ + SSMVF + +LYD+V+Y
Sbjct: 410 MQDIFKVSSMVFSSVGSMDHLYDMVKY 436
>gi|443429393|gb|AGC92678.1| ATP-dependent DNA helicase Q1-like protein [Heliconius erato]
Length = 632
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/447 (45%), Positives = 294/447 (65%), Gaps = 11/447 (2%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
M+ E++ E+ V+ ++ + ++I +L ++Q +L ER++ L + + + S + + G
Sbjct: 1 MKIEDLEDEIAEVDKDLAQIDKEILKLRNKQRELNERKTSLTNSIHKIKLVSLSRVDWDG 60
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+ +EW + +VF I +R Q INA LSG+ +V+M G GKS
Sbjct: 61 N----------VYEWSDNVKKILKDVFKIETFRPKQLSAINATLSGQHTIVVMPTGAGKS 110
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+++ G+ +V+SPL+SL++DQV L IPA ++TST+SKE+ AL+
Sbjct: 111 LCYQLPALVKPGLTIVISPLVSLMEDQVRSLKNKEIPAMLMTSTSSKEETSTALNALKDK 170
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
++K+LYVTPE+++KSKRFM+ L+KC GRL I+IDE HCCSQWGHDFRPDYK LGI
Sbjct: 171 NTKIKLLYVTPERLAKSKRFMANLQKCFAEGRLQRIAIDEVHCCSQWGHDFRPDYKYLGI 230
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
L FP++P++ LTATAT V D+ +ML I+ C+ ST NRPNL+Y + EK + +
Sbjct: 231 LTNMFPNIPILGLTATATAHVLTDVQKMLSIQGCLIIKSTFNRPNLYYKILEKPTSQEDC 290
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+ + K ++ Y ESGI+Y S K+ E +A L++RG+ YYHA M+ AR VHM+
Sbjct: 291 LSILEKLLKYRY-RGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHATMEAKARSDVHMK 349
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W + Q IV TVAFGMGI+KPDVRFVIHH++SKS+E YYQESGRAGRDG +EC+ +R
Sbjct: 350 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDGQRAECVTLYR 409
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRY 447
D+ + SSMVF + +LYD+V+Y
Sbjct: 410 MQDIFKVSSMVFSSVGSMDHLYDMVKY 436
>gi|428184545|gb|EKX53400.1| hypothetical protein GUITHDRAFT_64555, partial [Guillardia theta
CCMP2712]
Length = 513
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/365 (54%), Positives = 270/365 (73%), Gaps = 1/365 (0%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
++F + ++R Q EIINA L+ +DV V++ GGGKSLCYQLPA++ GI +V+SPLLSL+
Sbjct: 1 DIFNLSSFRPLQLEIINAFLAKKDVFVLLPTGGGKSLCYQLPAIIIPGIMVVISPLLSLM 60
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L ALG+ ML+S TSKE+ + + A+ KG +LK+LYVTPE+ISKS+ F+SKL
Sbjct: 61 QDQVEQLRALGVECMMLSSATSKEEMREVLGAMTKGSCKLKLLYVTPERISKSRLFLSKL 120
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E+ H R+S IDEAHCCSQWGHDFRPDY LGIL+ QFP VP+MALTATAT KVQ D
Sbjct: 121 EQAHDMQRISSFVIDEAHCCSQWGHDFRPDYLKLGILRRQFPRVPIMALTATATDKVQED 180
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ +ML I + + F ++NRPNL Y V EK K V+ I I++++ + +SGIVYC S
Sbjct: 181 VSKMLGIERSVVFRGSVNRPNLVYRVEEKPYASKDVLTMILSVIKQNF-SGKSGIVYCLS 239
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R++ E VA+ L + G+ A YHAD+ R +VH +W+K + ++V T+AFGMGINKPDV
Sbjct: 240 RRDAEDVAKFLAENGLRALPYHADLSDEYRTRVHQQWTKGIVHIMVATIAFGMGINKPDV 299
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDI 444
RFVIHHS+SKS+ YYQESGR GRDG + C+L++RP D+ R S+M F++ +GL+ +Y+I
Sbjct: 300 RFVIHHSMSKSLAAYYQESGRGGRDGDRAVCILYYRPGDLTRLSTMSFHDRNGLKGIYEI 359
Query: 445 VRYSQ 449
VRY +
Sbjct: 360 VRYCE 364
>gi|268570477|ref|XP_002640754.1| Hypothetical protein CBG24191 [Caenorhabditis briggsae]
gi|296439745|sp|A8WK63.1|RECQ1_CAEBR RecName: Full=Putative ATP-dependent DNA helicase Q1
Length = 618
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/441 (46%), Positives = 296/441 (67%), Gaps = 11/441 (2%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
EL +++ +V + +QI QL ++ +L +++ L+ +E ++ S ++
Sbjct: 12 ELADLDGQVSQIDQQISQLRRKKAELIQKKQALERKIE---------MKTNEDSDVVLDR 62
Query: 69 WS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
W +F W A+ + N F + +R Q INAV+S D +VI++ GGGKSLCYQLPA
Sbjct: 63 WDQDSFPWSDEANQILKNKFRLEKFRPLQSAAINAVMSKEDAIVILSTGGGKSLCYQLPA 122
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
+L +G+ LV+SPL+SL++DQ+M L LGI A L + T K++ K + +A+ KG EL++L
Sbjct: 123 LLAKGLTLVISPLVSLVEDQIMQLQKLGIDAASLNANTPKDEAKRVEQAITKGSTELRLL 182
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KSKR M++LEK G L LI+IDE HCCSQWGHDFR DY L +LK QF
Sbjct: 183 YVTPEKLAKSKRMMNQLEKSLGVGYLKLIAIDEVHCCSQWGHDFRTDYSFLNVLKRQFKG 242
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP++ LTATAT V +D+ +ML I I F + NR NL Y V K +++I +
Sbjct: 243 VPILGLTATATSNVLDDVKKMLGIPVAIVFRAGFNRANLNYKVLTKPGSEDECVEKIVRT 302
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+ + + ++GI+YC SR +CE++A+ L+ GI A +YHA M+ R H +W ++Q
Sbjct: 303 IKRKF-SGKTGIIYCLSRNDCEKLAKSLKANGIRAKHYHAYMEPVDRSAAHQKWVSGEIQ 361
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV TVAFGMGI+KPDVRFVIHHSL KS+E YYQESGRAGRDGLP+ C+L++R +D+ +Q
Sbjct: 362 VIVATVAFGMGIDKPDVRFVIHHSLPKSIENYYQESGRAGRDGLPATCILYYRMSDIFKQ 421
Query: 428 SSMVFYENSGLQNLYDIVRYS 448
SSM+ E +G+ NLY++VRY+
Sbjct: 422 SSMIQQEQTGIANLYNMVRYA 442
>gi|340374034|ref|XP_003385544.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Amphimedon
queenslandica]
Length = 775
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/449 (47%), Positives = 301/449 (67%), Gaps = 11/449 (2%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME EE+ E++ V+ + ++++I L + +L +R++ L S +E+ R
Sbjct: 3 MELEELTLEVKKVDDSLTRLEQKIANLQQEKIKLEDRKNLLVSQIESLHELR-------- 54
Query: 61 SSSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
S +W + TF W +VF I ++R Q INA++S RDV++IM GGGK
Sbjct: 55 SMQDKASDWETMTFPWSQILLTTLNSVFKIESFRPLQLPCINALMSKRDVMLIMPTGGGK 114
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL-E 178
SLCYQLPAV+ G ALV+SPL+SL++DQ+M + LGI M+ S++ + K ++ ++ +
Sbjct: 115 SLCYQLPAVISGGFALVISPLVSLMEDQLMSVKRLGINCAMINSSSPQAHVKKVHSSMID 174
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
K + LK++YVTPEKI+KSK FMSKL+K + GRLS+I IDE HC SQWGHDFRPDYK L
Sbjct: 175 KSDRSLKLVYVTPEKIAKSKVFMSKLDKAYGLGRLSIIVIDEVHCASQWGHDFRPDYKVL 234
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
GILK QFP+ P++ LTATAT KV +D +L++R C+ F ++ NRPNLFY V K S K
Sbjct: 235 GILKRQFPNSPLLGLTATATSKVFSDCKNILNLRSCLIFKASYNRPNLFYEVHNKISSQK 294
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
+D + + I + + +SGIVYCFS+K+ EQV+ L+ ISA YH MD R K H
Sbjct: 295 EQVDTMIQLINSRFKD-QSGIVYCFSQKDAEQVSIALQTGSISATCYHGGMDAGDRTKAH 353
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
W K+QVIV TVAFGMGI+K +VRF++HHS+SKS+E YYQESGRAGRDG P+ C+L+
Sbjct: 354 TEWYDGKIQVIVATVAFGMGIDKSNVRFIMHHSISKSMENYYQESGRAGRDGQPATCILY 413
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRY 447
++ ADV RQS+M + + + NLY +V+Y
Sbjct: 414 YKLADVFRQSTMSSKDFTSVANLYPMVQY 442
>gi|410931808|ref|XP_003979287.1| PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Takifugu
rubripes]
Length = 610
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/577 (40%), Positives = 351/577 (60%), Gaps = 44/577 (7%)
Query: 3 TEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLE----------AFEASR 52
T ++ + L+ VEAE+ V QI L ++ +L+ R+ L LE + +ASR
Sbjct: 7 TRDVQERLDTVEAELEEVDLQIAVLQQKKAELHRRRDALLQRLEEACDAAQPSSSSQASR 66
Query: 53 GSPIQYGGSSSTAVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLV 111
G P +S ++ + G+ F W + F +P +R Q +IN LSGRDV +
Sbjct: 67 GEP----AASRQEMQRFDGSDFPWSQEVVQHLQDTFHLPRFRPLQLRVINLTLSGRDVFL 122
Query: 112 IMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEK 171
+M G GKSLCYQLPA+ +G+ LVV+PL+SL++DQ+M L ++ + A ML +++SKE K
Sbjct: 123 VMPTGRGKSLCYQLPALCSKGLTLVVTPLVSLMEDQLMYLQSISVSAAMLNASSSKEHAK 182
Query: 172 FIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDF 231
+ + +++YVTPEKI+KSK MS+LEK + A LS I++DE HCCSQWGHDF
Sbjct: 183 SVMAGMTDPTVPFRLVYVTPEKIAKSKLLMSRLEKAYKAELLSRIAVDEVHCCSQWGHDF 242
Query: 232 RPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVR 291
RPDYK LGILK QFP VP++ LTATAT + D ++L +R+ + ++ NR NL+Y VR
Sbjct: 243 RPDYKLLGILKRQFPKVPLIGLTATATSTILKDCEKILSVRQPVTITASFNRTNLYYEVR 302
Query: 292 EKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDI 351
K+ ++++A I+ Y + +SGIVY FS+K+ E V+ L++RGI A YHA+MD
Sbjct: 303 VKNCDSDASVEDMASLIKSKYQH-QSGIVYVFSQKDAESVSSALQKRGILASPYHANMDP 361
Query: 352 NAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGL 411
+ VH RWS NK+QV+V TVAFGMGI+KPDVRFVIHH++SKS+E YYQESGRAGRD
Sbjct: 362 TDKSHVHRRWSTNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDDC 421
Query: 412 PSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF------- 464
P++C+++F +D+ R S+MV EN G Q L ++ Y Q +I++ R +
Sbjct: 422 PADCVIYFGFSDIFRISTMVVMENVGQQKLRQMLDYCQ-----SIDRCRRSLMAVHFDEV 476
Query: 465 ---EKLQQVNLFC-------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKI 510
E QQ+ C V + HA+ ++ +L+ +++ T L+LV+ +
Sbjct: 477 WDDEGCQQMCDTCRHPKDVSTVDITQHARQVVQILELAASMDEKTTPLKLVEAWTGRGPA 536
Query: 511 KLKEI--DSDLKREEIEQLVLQLIIDRVLVRIGPFSP 545
K +++ + L R + E +V+QL++ L F+P
Sbjct: 537 KRRKLIQTTTLSRTQAEAVVVQLLLKDYLSGDFSFTP 573
>gi|71987997|ref|NP_001022657.1| Protein K02F3.12, isoform b [Caenorhabditis elegans]
gi|351065879|emb|CCD61880.1| Protein K02F3.12, isoform b [Caenorhabditis elegans]
Length = 608
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/441 (46%), Positives = 292/441 (66%), Gaps = 11/441 (2%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
EL +++ E+ + +QI QL ++ +L +++ ++ +E ++ S +
Sbjct: 12 ELADLDGEIGQIDQQISQLRRKKSELTQKRQAIERKIE---------LKTNEDSDVVTDR 62
Query: 69 WS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
W F W A + F + +R Q+ INAV+S D +VI++ GGGKSLCYQLPA
Sbjct: 63 WDRDGFPWSDEATKILKEQFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPA 122
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
+L G+ALVVSPL+SL++DQ++ L +LGI + L + TSKE+ K + A+ + + ++L
Sbjct: 123 LLANGLALVVSPLISLVEDQILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSKFRLL 182
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KSK+ M+KLEK G L LI+IDE HCCSQWGHDFR DY L +LK QF
Sbjct: 183 YVTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDEVHCCSQWGHDFRTDYSFLNVLKRQFKG 242
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP++ LTATAT V +D+ +ML I+ + F + NR NL Y V +K +EIAK
Sbjct: 243 VPILGLTATATSNVLDDVKDMLGIQAALTFRAGFNRSNLKYKVVQKPGSEDECTEEIAKT 302
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+ + ++GI+YC SR +CE+VA+ L+ GI A +YHA M+ R H W K+Q
Sbjct: 303 IKRDFAG-QTGIIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQ 361
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV TVAFGMGI+KP+VRFVIHHSL KS+E YYQESGRAGRDG P+ C+L++R AD+ +Q
Sbjct: 362 VIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADIFKQ 421
Query: 428 SSMVFYENSGLQNLYDIVRYS 448
SSMV E +G+QNLY++VRY+
Sbjct: 422 SSMVQQERTGIQNLYNMVRYA 442
>gi|290991859|ref|XP_002678552.1| predicted protein [Naegleria gruberi]
gi|284092165|gb|EFC45808.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/385 (52%), Positives = 267/385 (69%), Gaps = 9/385 (2%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL-- 129
+FEW S +VFGIP++R Q E INA LSGRDV +IM GGGKSLCYQLPA++
Sbjct: 2 SFEWSSVLRSTLKDVFGIPSFRTLQLEAINATLSGRDVFIIMPTGGGKSLCYQLPAIIDV 61
Query: 130 --REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
G+ +V+SPLLSLIQDQVM L L IPA LTS E K IY+ L ++L
Sbjct: 62 GSSGGVTIVISPLLSLIQDQVMSLINLDIPAVFLTSEQDSETTKDIYRELGSRNPSFRLL 121
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEKIS+S+ F++ L + H G + +DEAHC S WGHDFRPDY+ LGI K +FPD
Sbjct: 122 YVTPEKISRSETFLNILRRLHERGLFKRVVVDEAHCVSNWGHDFRPDYRKLGIFKDEFPD 181
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP++ALTATAT VQ D++ L I+ C+ + NR NL+Y VR+K ++ K EI+++
Sbjct: 182 VPLIALTATATGIVQEDIIHQLKIKNCVSLKGSFNRTNLYYEVRKKQTLEKTA-KEISEF 240
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I + YPN +SGI+YC S+K+CE++A+EL G Y++D+ +++VH +WS+++L+
Sbjct: 241 INKKYPN-QSGIIYCLSKKDCEKMAEELTTLGHDVGVYNSDIKAADKQEVHEKWSRDELK 299
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+IV T+AFGMGINKPDVRFVIHHSL KS+E YYQESGRAGRDGLPS C+LF+ AD RQ
Sbjct: 300 IIVATIAFGMGINKPDVRFVIHHSLPKSIEDYYQESGRAGRDGLPSHCILFYSYADKARQ 359
Query: 428 SSMVFYEN---SGLQNLYDIVRYSQ 449
+ EN SG +N+ IV Y +
Sbjct: 360 QKFLENENTNKSGYENINKIVSYCE 384
>gi|71987993|ref|NP_001022656.1| Protein K02F3.12, isoform a [Caenorhabditis elegans]
gi|75024696|sp|Q9TXJ8.3|RECQ1_CAEEL RecName: Full=Putative ATP-dependent DNA helicase Q1
gi|351065878|emb|CCD61879.1| Protein K02F3.12, isoform a [Caenorhabditis elegans]
Length = 631
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/441 (46%), Positives = 292/441 (66%), Gaps = 11/441 (2%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
EL +++ E+ + +QI QL ++ +L +++ ++ +E ++ S +
Sbjct: 35 ELADLDGEIGQIDQQISQLRRKKSELTQKRQAIERKIE---------LKTNEDSDVVTDR 85
Query: 69 WS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
W F W A + F + +R Q+ INAV+S D +VI++ GGGKSLCYQLPA
Sbjct: 86 WDRDGFPWSDEATKILKEQFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPA 145
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
+L G+ALVVSPL+SL++DQ++ L +LGI + L + TSKE+ K + A+ + + ++L
Sbjct: 146 LLANGLALVVSPLISLVEDQILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSKFRLL 205
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KSK+ M+KLEK G L LI+IDE HCCSQWGHDFR DY L +LK QF
Sbjct: 206 YVTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDEVHCCSQWGHDFRTDYSFLNVLKRQFKG 265
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP++ LTATAT V +D+ +ML I+ + F + NR NL Y V +K +EIAK
Sbjct: 266 VPILGLTATATSNVLDDVKDMLGIQAALTFRAGFNRSNLKYKVVQKPGSEDECTEEIAKT 325
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+ + ++GI+YC SR +CE+VA+ L+ GI A +YHA M+ R H W K+Q
Sbjct: 326 IKRDFAG-QTGIIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQ 384
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV TVAFGMGI+KP+VRFVIHHSL KS+E YYQESGRAGRDG P+ C+L++R AD+ +Q
Sbjct: 385 VIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADIFKQ 444
Query: 428 SSMVFYENSGLQNLYDIVRYS 448
SSMV E +G+QNLY++VRY+
Sbjct: 445 SSMVQQERTGIQNLYNMVRYA 465
>gi|348537236|ref|XP_003456101.1| PREDICTED: ATP-dependent DNA helicase Q1 [Oreochromis niloticus]
Length = 651
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/570 (40%), Positives = 347/570 (60%), Gaps = 40/570 (7%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYG--------- 59
EL++VEAE+ V+ Q+ +++ ++ +L R++ L LE P+
Sbjct: 19 ELDSVEAELDTVELQLAEILQKKAELTSRKNALLQQLEE-ACDTAQPLSSSASKASEAKP 77
Query: 60 GSSSTAVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
S ++ + GT F W S+ F + +R Q + IN +SG+D+ ++M G G
Sbjct: 78 AMSKQEMQRYDGTDFPWSSKVGQHLKATFHLSNFRPLQLKAINLTMSGKDLFLVMPTGRG 137
Query: 119 KSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
KSLCYQLPA+ G LV++PL+SL++DQ+M L + + A ML +++S+E K + +
Sbjct: 138 KSLCYQLPAICSNGFTLVITPLVSLMEDQLMYLKTIDVSAVMLNASSSREHAKMVMAGMT 197
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
+ K++YVTPEKI+KSK MS+LEK + A LS I++DE HCCSQWGHDFRPDYK L
Sbjct: 198 DPKAPFKLVYVTPEKIAKSKLLMSRLEKAYKANLLSRIAVDEVHCCSQWGHDFRPDYKLL 257
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
GILK QFP VP++ LTATAT V D ++L + + I ++ NR NL+Y VR K S +
Sbjct: 258 GILKRQFPKVPLLGLTATATSSVLKDCEKILCVPQAITLTASFNRTNLYYEVRIKDSDSE 317
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
+++IA I+ Y + +SGIVY FS+K+ E V+ EL++R I A YHA+MD + +VH
Sbjct: 318 ASVNDIAALIKSKYKD-QSGIVYVFSQKDAELVSAELQKRDILAYPYHANMDSEDKSRVH 376
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
+W+ NK+QV+V TVAFGMGI+KPDVRFVIHH++SKS+E YYQESGRAGRD P++C++F
Sbjct: 377 RKWTSNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDDSPADCVVF 436
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVR----LVIFEKL---QQVN 471
F AD+ R S+MV EN G Q L +V Y Q N+++ R V F+++ + N
Sbjct: 437 FGFADIFRISTMVVMENVGQQKLLQMVDYCQ-----NVDRCRRSLMAVHFDEVWDDEGCN 491
Query: 472 LFC----------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLKEI-- 515
C V + HA+ ++ +++ +++LT L+LVD K K +++
Sbjct: 492 QMCDTCSQAKDYPTVDITQHARQVVQIVELAASMDEKLTPLKLVDAWMGKGPAKHRKMIQ 551
Query: 516 DSDLKREEIEQLVLQLIIDRVLVRIGPFSP 545
+ L R + E +++ L++ L F+P
Sbjct: 552 TTTLSRRQAEVVIVHLLLQGYLREDFSFTP 581
>gi|341891862|gb|EGT47797.1| hypothetical protein CAEBREN_03628 [Caenorhabditis brenneri]
Length = 617
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/441 (46%), Positives = 295/441 (66%), Gaps = 11/441 (2%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
EL +++ E+ + +I +L ++ QL +++ ++ +E ++ S V+
Sbjct: 12 ELADIDGEIEQIDNKIGELRRKKTQLVQKKQAIERKIE---------LKTHEDSDVVVDR 62
Query: 69 WS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
W F W A+ + + F + ++R Q+ INAV+S D +VI++ GGGKSLCYQLPA
Sbjct: 63 WDRDGFSWSDEANKILKDRFHLESFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPA 122
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
+L +G+ LVVSPL+SL++DQ++ L L I A L ++TSKE+ K + A+ + + ++L
Sbjct: 123 LLTKGLTLVVSPLISLVEDQILQLRKLNIDASCLNASTSKEETKRVEDAITNKDSQFRLL 182
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KSKR M+KLEK G L LI+IDE HCCSQWGHDFR DY L +LK QF
Sbjct: 183 YVTPEKLAKSKRMMNKLEKSLSVGFLKLIAIDEVHCCSQWGHDFRTDYAFLNVLKRQFKG 242
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP++ LTATAT V +D+ +ML I+ + F + NR NL Y V K S + +EIA
Sbjct: 243 VPILGLTATATSNVLDDVKDMLGIQAALVFRAGFNRSNLKYEVISKKSSDEECAEEIAHV 302
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I + + ++GIVYC SR +CE++A L+ +GI A +YHA M+ + + H W K+Q
Sbjct: 303 INTQF-SGQTGIVYCLSRNDCEKMATLLKTKGIRAKHYHAYMEPSEKSSSHQNWISGKIQ 361
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV TVAFGMGI+KPDVRFVIHH++ KS+E YYQESGRAGRDGLP+ C+L+F+ +DV +Q
Sbjct: 362 VIVATVAFGMGIDKPDVRFVIHHTIPKSIENYYQESGRAGRDGLPATCILYFKLSDVFKQ 421
Query: 428 SSMVFYENSGLQNLYDIVRYS 448
SSMV + +GL NLY+IVRY+
Sbjct: 422 SSMVQQDRTGLSNLYNIVRYA 442
>gi|308477330|ref|XP_003100879.1| hypothetical protein CRE_16178 [Caenorhabditis remanei]
gi|308264453|gb|EFP08406.1| hypothetical protein CRE_16178 [Caenorhabditis remanei]
Length = 607
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/388 (52%), Positives = 270/388 (69%), Gaps = 2/388 (0%)
Query: 62 SSTAVENWS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
S + W F W A+D+ N F + +R Q+ INAV+S D +VI+ GGGKS
Sbjct: 37 SDVVLNRWDRDGFSWSQEANDILRNKFHLDTFRPLQRAAINAVMSKEDAVVILITGGGKS 96
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+L +G+ LVVSPL+SL++DQ++ L LGI A L + TSKE+ K + +A+ +
Sbjct: 97 LCYQLPALLAKGLTLVVSPLVSLVEDQILQLRKLGIDASSLNANTSKEEAKRVEEAITRN 156
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+ E ++LYVTPEK++KSKR M+KLEK G L LI+ID+ HCCSQWGHDFR DY L +
Sbjct: 157 DSEFRLLYVTPEKLAKSKRMMNKLEKSLAVGFLKLIAIDKVHCCSQWGHDFRTDYGFLNV 216
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QF VP++ LTATAT V +D+ +ML I+ + F + NR NL Y V K
Sbjct: 217 LKRQFKGVPILDLTATATSNVLDDVKDMLGIQAALVFRAGFNRSNLKYQVLPKKGSEDEC 276
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
++EIA I++ + + E+GI+YC SR +CE+VA+ L+ +GI A +YHA M+ N R H
Sbjct: 277 VEEIAAIIKQRF-SGETGIIYCLSRNDCEKVAKSLKTQGIRAKHYHAYMEPNDRSACHQS 335
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W K+QVIV TVAFGMGI+KPDVRFVIHHSL KS+E YYQESGRAGRDG P+ C+L++R
Sbjct: 336 WISGKIQVIVATVAFGMGIDKPDVRFVIHHSLPKSIENYYQESGRAGRDGRPATCILYYR 395
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYS 448
AD+ +QSSMV E +G+ NLY+IV Y+
Sbjct: 396 LADIFKQSSMVQQERTGIANLYNIVNYA 423
>gi|198427281|ref|XP_002131591.1| PREDICTED: similar to RECQL1 protein [Ciona intestinalis]
Length = 697
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/554 (41%), Positives = 337/554 (60%), Gaps = 36/554 (6%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
EL V+ + +Q+ + Q+ L+++ +++ ++ + + +T V+
Sbjct: 85 ELRKVKYAIENKNQQVLSIQSEQEMLHKKMTDIVQEIKDNSSPHSNTKHVPQLHNTDVDW 144
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
S F W + D +VF I + Q + IN+ +S DVL+IM+ GGGKSLC+QLPA+
Sbjct: 145 SSKNFPWSAELDKTLQDVFQIKHFHPVQLQAINSTMSKCDVLLIMSTGGGKSLCFQLPAI 204
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
+ +GI LVV+PL+SL++DQV+ L GI AHML + +S +D +Y +++ ++K++Y
Sbjct: 205 ISKGITLVVTPLVSLMEDQVLNLKQYGIKAHMLKADSSMDDVMEVYDSMKSPNPQVKLVY 264
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPEKISKSK+FMS L+KC+ +G LS I+IDE HC SQWG+DFRPDYK LGILK +P
Sbjct: 265 VTPEKISKSKQFMSHLDKCYKSGNLSRIAIDEVHCVSQWGNDFRPDYKMLGILKRLYPST 324
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P++ LTAT+T KV D ++L+I C+ F + + R NLFY VR K + + V+ +I I
Sbjct: 325 PIIGLTATSTNKVTFDTKQLLNIPDCLVFRTPLVRKNLFYEVRPKPTTHQKVVQDIVTTI 384
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
QE++ ESGI+YC S + C V L + GI A YHA + +VH +W N++QV
Sbjct: 385 QENF-KGESGIIYCISCRNCTDVCNSLIKSGIRAAVYHARCSAKKKSEVHQQWLNNEIQV 443
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
I TVAFGMGINKP VRFVIHHS+SKSVE Y+QE+GRAGRDG PS CLL+F DV RQ+
Sbjct: 444 ICATVAFGMGINKPQVRFVIHHSISKSVENYFQEAGRAGRDGKPSLCLLYFGFWDVFRQT 503
Query: 429 SMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRL-VIFEKLQQVNLFC----MVVLAGHAQ 483
SMVF E +G +NL +V++ N++ R+ ++ +VN C M + + Q
Sbjct: 504 SMVFRERTGTENLSKVVKFCH-----NLKTCRVELLANHFGEVNEQCQSPGMCDVCSNLQ 558
Query: 484 ----------CIISLLQDIQDNN---QRLTMLQLVD-------KMKIKLKEIDSDLKREE 523
C + LL+ I+ N+ RLT +QLVD K K K DL R E
Sbjct: 559 KTTKKDVTEPCKV-LLRLIKSNSMDGNRLTGIQLVDAAIRDSKNRKTKWK----DLSRHE 613
Query: 524 IEQLVLQLIIDRVL 537
+++V ++++ L
Sbjct: 614 WQRIVFDMLVNGFL 627
>gi|427789035|gb|JAA59969.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 640
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/566 (41%), Positives = 333/566 (58%), Gaps = 46/566 (8%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVE 67
QEL VE E+ +++I +L ++ L R+ EL L+ A
Sbjct: 8 QELAKVEKELISTEKEIVRLKTLREGLVRRKHELSVKLKQ-----------KSLDDIART 56
Query: 68 NWS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLP 126
+WS F W +R ++ NVF + ++R+ Q IN LS +D ++IM GGGKSLCYQLP
Sbjct: 57 DWSKSNFPWSNRVNETLENVFHMTSFRSMQLPAINVTLSNKDCILIMPTGGGKSLCYQLP 116
Query: 127 AVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKM 186
A++ +G+ +VVSPLLSL++DQVM L A+ P ML + S +D I KA+ GE LK+
Sbjct: 117 ALISKGVTVVVSPLLSLMEDQVMALQAMSYPVAMLAANVSVKDTNQILKAMADGEDSLKL 176
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPEK++KSKRFMS LEK + + ++IDE HCCSQWGHDFRPDYK L I+K QFP
Sbjct: 177 LYVTPEKMAKSKRFMSMLEKAYQRKHFARLAIDEVHCCSQWGHDFRPDYKYLAIMKRQFP 236
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
+VP++ +TATA+ + D+ +ML I + + ++RPNL Y V K S + IA+
Sbjct: 237 EVPILGVTATASAAIIADVQKMLDIESAVVLRAPLDRPNLVYEVLAKPSANDEAVKMIAR 296
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
I + N + GIVYCFS KE +++A EL+ GI+ D YHA M+ + R VH RW K+
Sbjct: 297 IILGRFKN-QCGIVYCFSIKETDELADELKGYGIAVDSYHASMEPHRRSSVHTRWMHGKI 355
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
VIV T+AFGMGI+K +VRFVIHH++SKSVE YYQESGRAGRD P+ CL+ FR AD+ R
Sbjct: 356 LVIVATIAFGMGIDKSNVRFVIHHTMSKSVENYYQESGRAGRDDQPATCLILFRFADIFR 415
Query: 427 QSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF-----EKLQQVNLF------CM 475
Q++ VF E G +N+Y +VRY ++ + R +F EK Q + C
Sbjct: 416 QTTSVFTEKCGRENVYTMVRYCV-----DVHECRRAMFLRHFGEKQQDIRCHDGICDNCR 470
Query: 476 VV-------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLKE---IDSDLKR 521
+ + H + I +L D ++LT +L+D K K KE +DL R
Sbjct: 471 IKGSVKDIDVTVHIKNIYRILDTASDAKEQLTAAKLIDAWTGKDAKKWKERGVTKTDLPR 530
Query: 522 EEIEQLVLQLIIDRVLV---RIGPFS 544
E E +V +++ L I P++
Sbjct: 531 ERCETIVAWALLEGYLAEKFHITPYA 556
>gi|443695320|gb|ELT96261.1| hypothetical protein CAPTEDRAFT_131881 [Capitella teleta]
Length = 570
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/563 (39%), Positives = 336/563 (59%), Gaps = 40/563 (7%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVE 67
QEL + E+ +++QI+ L +R+ QL ++ L+ ++A + A++
Sbjct: 21 QELRQINEELESLEKQIENLNERKMQLKRKKQCLQENIKA--------------QTLALQ 66
Query: 68 NWSGTFE-----WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
+ + + W + + +VFGI R Q +N LS ++ +++M GGGKSLC
Sbjct: 67 SSTDQLDRQDHLWSKELSEKQSSVFGISDLRPLQLSTMNLTLSNKNCILVMPTGGGKSLC 126
Query: 123 YQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEG 182
+QLPA+L +G+ LV+SPL+SL++DQ+ L L I A ML ++++KE KF++ + +
Sbjct: 127 FQLPALLSKGVTLVISPLVSLMEDQLFALENLNISAAMLNASSTKEHVKFVHSEMTSTKS 186
Query: 183 ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
+L++LYVTPEK++KSKRFMS LEK + RL+ +IDE HCCSQWGHDFRPDYK LGILK
Sbjct: 187 DLRLLYVTPEKLAKSKRFMSYLEKMYTQNRLARFAIDEVHCCSQWGHDFRPDYKFLGILK 246
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
QFP P++ LTATAT V ND+ ++L I C+ ++ NR NLFY VR K S +++
Sbjct: 247 RQFPKAPILGLTATATSSVLNDVKKILQIPDCVILKASFNRANLFYEVRPKPSNAHALVE 306
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWS 362
EI IQ + + +SGIVYC ++K+ E++A++L+ G++A YHA MD R H +W+
Sbjct: 307 EIVDLIQTRFRD-QSGIVYCLTQKDSEEMARQLQSHGLTAACYHAQMDAKHRSLAHRKWT 365
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
NK+QV+V T+AFGMGI+KP+VRFVIHH++SKS+E YYQESGRAGRD + C++F A
Sbjct: 366 TNKIQVVVATIAFGMGIDKPNVRFVIHHTISKSMENYYQESGRAGRDDQTAHCIVFRGFA 425
Query: 423 DVPRQSSMVFYENSGLQNLYDIVRY-------------SQYPLHWNIEKV--RLVIFEKL 467
D+ RQS+MVF E +G + LY ++ Y + W + ++
Sbjct: 426 DLFRQSTMVFSEQTGQEKLYSMLDYVNDLSTCRRALIARHFGETWKSSDCQEKCDNCQRK 485
Query: 468 QQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDK-MKIKLKEIDSDLKREEIEQ 526
V F A + I+S I QR T L+L+D M K + L R + E
Sbjct: 486 TSVTSFNCYSFAKNLINILSKTSKI----QRYTGLKLLDAWMAQKPCLQEKKLSRSQCEM 541
Query: 527 LVLQLIIDRVLVRIGPFSPGKKI 549
+++QLI + L F+P I
Sbjct: 542 IIMQLITNGYLKEDYHFTPYSTI 564
>gi|339243055|ref|XP_003377453.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
gi|316973743|gb|EFV57302.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
Length = 605
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 289/439 (65%), Gaps = 10/439 (2%)
Query: 18 RLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASR-------GSPIQYGGSSSTAVENWS 70
+ +QE+I ++ D + + E+ S+LK +A + +Q S + +
Sbjct: 6 KAIQERILKIQDELNSINEKISDLKRQARELQAEKELLQERLDRRVQQANSVESLTSWET 65
Query: 71 GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR 130
F W S + ++FG+ ++R Q +NA+LSGRDVL+ M+ GGGKSL YQLPAVL
Sbjct: 66 EFFSWSSELSEKLKSIFGMNSFRPLQLSAMNAILSGRDVLLTMSTGGGKSLTYQLPAVLG 125
Query: 131 EG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
LV+SPL+SL++DQV+ L GI A +L T E+ K I + + ++LY
Sbjct: 126 NASQFTLVISPLVSLMEDQVISLNTRGIEAVLLYQHTPPEEMKRILAEMNSPGCKFRLLY 185
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE+++KSKRFM+KLEK + AG L LI+IDE HCCSQWGHDFRPDYK LG+L+ QFPD
Sbjct: 186 VTPERLAKSKRFMAKLEKAYQAGLLKLIAIDEVHCCSQWGHDFRPDYKFLGVLRRQFPDT 245
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P++ LTATAT V D+ E+L+I ++F ++ NRPNLFY V++K + ++ + K +
Sbjct: 246 PILGLTATATVAVLQDIKEILNIPMALEFRASFNRPNLFYQVQQKPDRPEELLQIVCKLL 305
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ + + +SGI+YCFS+K+ E AQ LR G+ A++YHADMD N R VH +W NK QV
Sbjct: 306 KGQF-SGQSGIIYCFSKKDSETFAQNLRTNGVKAEHYHADMDPNERGMVHRKWLSNKCQV 364
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
IV TVAFGMGI+K DVR VIH +L KSVE YYQESGRAGRDG P+ CLL+F AD+ R S
Sbjct: 365 IVATVAFGMGIDKADVRVVIHLALPKSVENYYQESGRAGRDGQPASCLLYFGFADLFRLS 424
Query: 429 SMVFYENSGLQNLYDIVRY 447
V E +GL+NLY ++ Y
Sbjct: 425 VTVCNERNGLENLYKMLAY 443
>gi|324516572|gb|ADY46570.1| ATP-dependent DNA helicase Q1, partial [Ascaris suum]
Length = 430
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 289/438 (65%), Gaps = 24/438 (5%)
Query: 2 ETEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS 61
E EI EL+NVE E+R ++++ L++R+ ++ ER+ E + G+
Sbjct: 10 EIAEIDVELQNVENEIRTLKKRKHALIERK-RVIERRIE----------------ERNGT 52
Query: 62 SSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
++ + +W + +F W ++ DV VF + +R Q+ IN++LS D L+IM+ GGGKS
Sbjct: 53 TTEDISHWETDSFPWSTQCYDVLRKVFRLADFRPLQRSTINSILSKEDTLIIMSTGGGKS 112
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPAVL GI LVVSPL+SLI+DQ++ LA LGI A L +TSK++ I KAL
Sbjct: 113 LCYQLPAVLLSGITLVVSPLVSLIEDQLLQLAKLGIEAATLNQSTSKDEAARIQKALTDP 172
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
++LYVTPEK++KSKR M++LEKC GRL +++IDE HCCSQWGHDFRPD+K L +
Sbjct: 173 NSSFRLLYVTPEKLAKSKRVMNRLEKCAEMGRLKVVAIDEVHCCSQWGHDFRPDFKFLNV 232
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK QF VP++ LTATAT V +D+ +L I + F + NRPNL+Y VR K S +
Sbjct: 233 LKRQFKGVPILGLTATATADVIDDVKNILSIPAAVVFRAGFNRPNLYYEVRNKPSSSEQF 292
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+DE+ I + + + +SGI+YCFSRKECE + LR R I A +YHA ++ + R + H R
Sbjct: 293 LDELVSLINDRF-DGQSGIIYCFSRKECEDLTHALRSRKIKAAHYHAYLESDKRSRTHER 351
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF-- 418
W ++ VIV TVAFGMGI+K DVR+VIHHS++KS+E YYQESGRAGRDG + C+L
Sbjct: 352 WIGGEVDVIVATVAFGMGIDKTDVRYVIHHSMAKSMENYYQESGRAGRDGKQATCILLLS 411
Query: 419 -FRPADVPRQSSMVFYEN 435
+RP P + ++ EN
Sbjct: 412 SWRP--YPSKHYGLYREN 427
>gi|449669780|ref|XP_002159097.2| PREDICTED: ATP-dependent DNA helicase Q1-like [Hydra
magnipapillata]
Length = 638
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/507 (43%), Positives = 322/507 (63%), Gaps = 34/507 (6%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+F W + + L+ F I +R Q E INA L+ +D +++M G GKSLC+QLPAV+ +
Sbjct: 67 SFPWSEKIVNCLLSTFKINNFRPLQLETINATLAKKDCILVMPTGSGKSLCFQLPAVVSD 126
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G LVVSPL+SL++DQ++ L L I A ML +++ K I + G LK+LYVTP
Sbjct: 127 GFTLVVSPLVSLMEDQLIGLRELKIEAAMLDASSPKAYITNIQNQMITQNGSLKLLYVTP 186
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E+++KSKRFM+KLEK + G ++ I IDE HC S WGHDFRPDYK LGILK QFP +P++
Sbjct: 187 ERLAKSKRFMAKLEKAYSVGSINRIVIDEVHCASHWGHDFRPDYKYLGILKRQFPLLPIL 246
Query: 252 ALTATATQKVQNDLMEMLHIRK-CIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQE 310
LTATA++KV +D+ ++L+++ C+ F + NRPNLFY V+ +++EIA I+
Sbjct: 247 GLTATASKKVLDDIKDILNLKSDCLLFRGSFNRPNLFYEVKHTLLSPSELVNEIATCIKS 306
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIV 370
+ ESGIVYCFSRK+ E+V+ L + GI++ YHAD+ + + KVH W K +QVIV
Sbjct: 307 RF-KEESGIVYCFSRKDSEEVSTLLNRHGINSHCYHADISSDVKTKVHQLWIKGDIQVIV 365
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSM 430
T+AFGMGI+KP+VRFVIH+SLSKS+E YYQESGRAGRDG + C+L+FR D+ RQ SM
Sbjct: 366 ATIAFGMGIDKPNVRFVIHYSLSKSIENYYQESGRAGRDGHNAYCILYFRFQDIFRQMSM 425
Query: 431 VFYENSGLQNLYDIVRYSQYPLHWNIEKV---RLVI---FEKLQQVNLFCMVV------- 477
VF E +GL+ +Y ++RY IEK R +I FE+ + + C +
Sbjct: 426 VFSEKTGLEKVYQMLRYC-------IEKKQCRRNIISLDFEEAWKTSDSCKMCDNCFIEK 478
Query: 478 -------LAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLKEID-SDLKREEIE 525
+ + ++S+L+ +++LT L+L+D K K L+ I L REE E
Sbjct: 479 SRLETRDIRQYGLTVVSILKSATAVDEKLTPLKLIDIWLGKGKSSLRPISVCTLSREECE 538
Query: 526 QLVLQLIIDRVLVRIGPFSPGKKIIKL 552
++ +L+++RV+ F+P I L
Sbjct: 539 FVLSKLLLERVVREEFHFTPYSTITYL 565
>gi|47217239|emb|CAF96762.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 314/496 (63%), Gaps = 29/496 (5%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W + F +P +R Q +N LSGRD+ ++M G GKSLCYQLPA+ +G
Sbjct: 2 FPWSKEVAQHLKDTFHLPKFRPLQLRAVNLTLSGRDLFLVMPTGRGKSLCYQLPALCSKG 61
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
LVV+PL+SL++DQVM L ++ + A ML +++SKE K + L + +++YVTPE
Sbjct: 62 FTLVVTPLVSLMEDQVMYLQSISVSAAMLNASSSKEHAKTVLAGLTDPKTPFRLVYVTPE 121
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
KI+KSK MS+LEK + A LS I++DE HCCSQWGHDFRPDYK LGILK QFP VP++
Sbjct: 122 KIAKSKLLMSRLEKAYKADLLSRIAVDEVHCCSQWGHDFRPDYKLLGILKRQFPKVPLIG 181
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTATAT+ V D ++L +R+ I ++ NR NL+Y VR K+S +++IA I+ Y
Sbjct: 182 LTATATRGVLEDCEKILCVRQPITITASFNRTNLYYEVRVKNSDNDASVNDIASLIKTRY 241
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
+SGIVY FS+K+ E V+ EL++R I A YHA+MD + + ++H RW+ NK+QV+V T
Sbjct: 242 -REQSGIVYVFSQKDAESVSSELQKRDILAYPYHANMDPSDKSRIHRRWTTNKIQVVVAT 300
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
VAFGMGI+KPDVRFVIHH++SKSVE YYQESGRAGRD P++C++FF +D+ R S+MV
Sbjct: 301 VAFGMGIDKPDVRFVIHHTISKSVENYYQESGRAGRDDRPADCIVFFGFSDIFRVSTMVV 360
Query: 433 YENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF----------EKLQQVNLFC-------M 475
E G Q L ++ Y Q NI++ R + E QQ+ C
Sbjct: 361 METVGQQKLRQMLDYCQ-----NIDRCRRSLLAVHFDEVWDDEGCQQMCDTCRHAKEVVA 415
Query: 476 VVLAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLKEI--DSDLKREEIEQLVL 529
++ HA+ ++ +L+ ++++T L+LV+ + K +++ + L RE E +V+
Sbjct: 416 TDISQHARQLVHILELAASLDEKMTPLKLVEAWTGRGPAKRRKMIQTTALSRERAEAVVV 475
Query: 530 QLIIDRVLVRIGPFSP 545
+L++ L F+P
Sbjct: 476 RLLLKDYLSGDFSFTP 491
>gi|432943336|ref|XP_004083165.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Oryzias latipes]
Length = 802
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/577 (40%), Positives = 353/577 (61%), Gaps = 40/577 (6%)
Query: 3 TEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLE-AFEASRGSPIQYGGS 61
+ ++ EL++VE E++L+Q QI +L+++Q +L R+ EL LE A EA++ S S
Sbjct: 5 STDVQAELDSVEEELQLLQVQISELLEKQAELTTRKEELLQRLEDACEAAQSSSSSSASS 64
Query: 62 SSTAVENW----------SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLV 111
S A E F W + D F + A+R Q IN + GRDV +
Sbjct: 65 KSLASEPVMSQQEMQRYDEAEFPWSAAVDQHLRTSFHLSAFRPLQLRAINLTMEGRDVFL 124
Query: 112 IMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEK 171
+M G GKSLCYQLPAV EG LVVSPL+SL++DQ++ L +L +PA L +++ KE K
Sbjct: 125 VMPTGRGKSLCYQLPAVCSEGFTLVVSPLVSLMEDQLLLLRSLQVPAAALNASSGKEHTK 184
Query: 172 FIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDF 231
+ AL + K++YVTPEKI+KSK MS+LEK + A LS +++DE HCCSQWGHDF
Sbjct: 185 TVLAALTDPKAPFKLVYVTPEKIAKSKLLMSRLEKAYKAKLLSRMAVDEVHCCSQWGHDF 244
Query: 232 RPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVR 291
RPDYK LGILK QFP VP++ LTATAT V D ++L + + + ++ NR NL+Y VR
Sbjct: 245 RPDYKLLGILKRQFPSVPLLGLTATATSSVLQDCRKILCVPQPVTLTASFNRANLYYEVR 304
Query: 292 EKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDI 351
K S + + +I+ I+ Y +SGIVY FS+K+ E V+ L++ GI A YHA+MD
Sbjct: 305 VKDSDSDLSLSDISSLIKNRY-KEQSGIVYVFSQKDAESVSSALQKSGIQAYPYHANMDP 363
Query: 352 NAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGL 411
+ +VH +W+ NK+QV+V TVAFGMGI+KPDVRFVIHH++SKS+E YYQESGRAGRD
Sbjct: 364 EDKSRVHRKWTSNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDDR 423
Query: 412 PSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVR----LVIFEKL 467
P++C+++F AD+ R S+MV E+ G + L +V + Q N+++ R V F+++
Sbjct: 424 PADCIVYFGFADIFRISTMVVMESVGQKKLLQMVDFCQ-----NVDRCRRSLMAVHFDEV 478
Query: 468 ---QQVNLFC----------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMK----I 510
+ N C + + HA+ ++ +++ ++RLT L+LV+ +
Sbjct: 479 WDDEDCNQMCDTCRHPAGYNTLDVTQHARQVVQIVELATSMDERLTPLKLVEAWRGRGPA 538
Query: 511 KLKEI--DSDLKREEIEQLVLQLIIDRVLVRIGPFSP 545
K +++ ++L R + E +++ L++ L F+P
Sbjct: 539 KRRKMIQTTELPRRQAEAVIVFLLLQGYLREDFSFTP 575
>gi|195995715|ref|XP_002107726.1| hypothetical protein TRIADDRAFT_19930 [Trichoplax adhaerens]
gi|190588502|gb|EDV28524.1| hypothetical protein TRIADDRAFT_19930 [Trichoplax adhaerens]
Length = 605
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/446 (45%), Positives = 295/446 (66%), Gaps = 16/446 (3%)
Query: 7 LQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAV 66
++ L+ ++ E+ + Q+K L+DR++QL + Q +L+ + +Q S T
Sbjct: 1 MEALQEIQQELSSIDVQVKNLLDRKEQLLQLQDQLQQEI----------VQQAKWSGTNC 50
Query: 67 ENWSG--TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
+WS F W ++ + + FGI +R Q E +N LS D ++I+ G GKSLCYQ
Sbjct: 51 TDWSSDSNFTWSNQLLQISRDTFGIENFRQYQLEAMNVTLSEIDCILILPTGAGKSLCYQ 110
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPA-HMLTSTTSKEDEKFIY-KALEKGEG 182
+PA+L +G LV+SPL+SL+QDQ++ L G+ ML++ T K +Y + L EG
Sbjct: 111 IPALLSQGFTLVISPLVSLMQDQIISLKLKGVEGVEMLSAETEPSHTKAVYQRMLSDNEG 170
Query: 183 ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
LK+L+VTPEKI KSKRF+S LEK ++ RL+ I +DE HC SQWG+DFRPDYK LG+LK
Sbjct: 171 ILKILFVTPEKIGKSKRFLSNLEKANNCNRLARIVVDEVHCTSQWGNDFRPDYKALGVLK 230
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKC-IKFVSTINRPNLFYMVREKSSVGKVVI 301
QFP VP++ LTATA++ + D+ +L + C + F ++ R NL Y VR+K S I
Sbjct: 231 RQFPSVPLLGLTATASEAITQDIKTILSLSTCCMIFRGSMTRVNLIYEVRQKPSSHTDTI 290
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
+++ I + + N +SGI+YC +RKE E VA +L +GI A +YHADM+++ R VH W
Sbjct: 291 NDMVSLINDKFRN-QSGIIYCCTRKESETVASDLVSKGIHAAFYHADMEMSERSSVHRHW 349
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
+NK+ VIVGT+AFGMGI+KPDVRFVIHH++SKS+E YYQESGRAGRDG + C+L++RP
Sbjct: 350 IENKVNVIVGTIAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDGQLARCILYYRP 409
Query: 422 ADVPRQSSMVFYENSGLQNLYDIVRY 447
D + S MVF E +G +NLY +++Y
Sbjct: 410 LDAFKLSCMVFMEQTGQKNLYKMLQY 435
>gi|193606281|ref|XP_001943152.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Acyrthosiphon pisum]
Length = 599
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/440 (44%), Positives = 289/440 (65%), Gaps = 13/440 (2%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
+L +E E++ + ++ +L R+ +L E++ +LK L Q +S +
Sbjct: 13 KLSKIEQELKEINVKVIKLQKRKAELLEQKDKLKQL----------SYQKQTNSISDHNK 62
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
W T F W R D VF + ++R+ Q IN LS D ++IM GGGKSLCYQLPA
Sbjct: 63 WIHTDFPWHERVKDTLKTVFKLDSFRSQQLAAINITLSKHDAILIMPTGGGKSLCYQLPA 122
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ +G LVVSP++SL++DQ++ + L + A M++S +SKED K +++ + + LK++
Sbjct: 123 LIDQGFTLVVSPMVSLMEDQIIQIQKLDVNAKMISSYSSKEDVKLLFQMMTDIKSGLKLV 182
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
Y TPE+I KSK FM+KL+K H LS I+IDE HCC+ WGHDFRPDY +L I K FPD
Sbjct: 183 YCTPERIVKSKTFMNKLQKAHSLKYLSRIAIDEVHCCTTWGHDFRPDYTHLTIFKPMFPD 242
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
+P++ LTATA+ KV D ++L I+ C ++ NRPNL+Y V+ K GK +DE+A
Sbjct: 243 IPILGLTATASSKVIVDTQKLLQIQGCALLKASFNRPNLYYEVKWKPE-GKKCVDELASL 301
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
++ + N +SGI+Y S K+CE + ++L++ G YHA ++ R KVH +W ++ Q
Sbjct: 302 LKNKFKN-QSGIIYTTSIKDCESLRKDLKEHGCRVGSYHAQLEGPLRSKVHRKWLNDEYQ 360
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+V T+AFG+GI+KP+VRFVIHH+LSKS+E +YQESGRAGRDG PS CLL+++ +DV +
Sbjct: 361 AVVATIAFGLGIDKPNVRFVIHHTLSKSIENFYQESGRAGRDGKPSTCLLYYKLSDVFKL 420
Query: 428 SSMVFYENSGLQNLYDIVRY 447
S+MVF +GL NLY I++Y
Sbjct: 421 STMVFTTQTGLPNLYSIIKY 440
>gi|241829138|ref|XP_002414740.1| DNA helicase recq1, putative [Ixodes scapularis]
gi|215508952|gb|EEC18405.1| DNA helicase recq1, putative [Ixodes scapularis]
Length = 619
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/381 (50%), Positives = 260/381 (68%), Gaps = 2/381 (0%)
Query: 68 NW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLP 126
+W T+ W + D +VF + R Q IN +S D +VIM GGGKSLC+QLP
Sbjct: 57 DWHKSTYPWSAGVLDKLTSVFKMKGLRPTQLPAINVTMSNHDCIVIMPTGGGKSLCFQLP 116
Query: 127 AVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKM 186
A+L G+ +VVSPL+SL++DQVM L L P ML++TT ++ I A++ + +K+
Sbjct: 117 ALLSPGLTVVVSPLVSLMEDQVMALERLSYPVAMLSATTPQKKTSAITNAMDDKKSPIKL 176
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
+YVTPEK++KSKRFM+KLEK + G S ++IDE HCCSQWG+DFRPDYK LGI+K QFP
Sbjct: 177 IYVTPEKMAKSKRFMAKLEKAYQKGCFSRLAIDEVHCCSQWGNDFRPDYKYLGIMKRQFP 236
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+M LTATA+ + D+ +ML I C+ + ++RPNL Y V K S V++ +
Sbjct: 237 KVPIMGLTATASATIVADIQKMLSIEDCVVLRAPLDRPNLRYEVCSKPSGQAEVLETLVG 296
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
+ + +SGIVYCFS K+ +VA L Q GI AD Y+A+MD R VH RWS N++
Sbjct: 297 LLLGRF-RGQSGIVYCFSIKDTHEVASGLCQHGIRADCYNANMDHKDRSDVHFRWSHNEI 355
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
V+V TVAFGMGI+KPDVRFVIHH++SKSVE YYQESGRAGRD P+ C++ +R AD+ R
Sbjct: 356 DVVVATVAFGMGIDKPDVRFVIHHTMSKSVENYYQESGRAGRDDAPAVCIVMYRFADIFR 415
Query: 427 QSSMVFYENSGLQNLYDIVRY 447
Q++ VF E +G +N+Y +V Y
Sbjct: 416 QTTSVFAEKTGQENVYAMVSY 436
>gi|157115597|ref|XP_001652627.1| DNA helicase recq1 [Aedes aegypti]
gi|108876847|gb|EAT41072.1| AAEL007256-PA [Aedes aegypti]
Length = 750
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/522 (42%), Positives = 319/522 (61%), Gaps = 37/522 (7%)
Query: 61 SSSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
S+ A ++W S F W V VF + +RA Q INA+L+ ++VL++ GGGK
Sbjct: 66 SNIIAKKDWESEEFGWSKEVRRVLKEVFHMADFRAQQLATINALLAKQNVLLLAPTGGGK 125
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SLCYQLPAV+ +GI LVVSPL+SL++DQV L GI A L T+ KE ++K L
Sbjct: 126 SLCYQLPAVVSKGITLVVSPLISLMEDQVWALKKRGIRAEYLCGTSEKELVSAVHKYLRD 185
Query: 180 GE-GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
G+ G LK+L+VTPE+I++S RF + L+KC++ +L+ I+IDE HCCSQWGHDFR DYK L
Sbjct: 186 GDDGNLKILFVTPERINRSARFKTALQKCYNIKKLAQIAIDEVHCCSQWGHDFRTDYKEL 245
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
GI KT FPDVP++ +TATAT KV +D+ +ML + +C+ + NRPNL+Y V EK + +
Sbjct: 246 GIFKTLFPDVPILGVTATATTKVISDVQKMLQLSECLTLNAPFNRPNLYYHVLEKPNDKE 305
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHA-DMDINAREKV 357
+ D +A ++ Y + SGI+Y F+ KE +++ EL QR + YH +MD R +
Sbjct: 306 ELYDLLADLLKRRY-HGMSGIIYTFTVKETAEISTELLQREVKVLPYHGQNMDPKQRSRT 364
Query: 358 HMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLL 417
H +W N++Q +V T AFGMGI+KPDVRFVIHH++SK++E +YQESGRAGRDG ++C+L
Sbjct: 365 HQKWIDNEIQAVVATTAFGMGIDKPDVRFVIHHTMSKTMENFYQESGRAGRDGKRADCIL 424
Query: 418 FFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF------------- 464
+R AD+ R S+M F E GL NLY +V+Y N + R V+
Sbjct: 425 LYRLADMFRISTMSFSEYGGLDNLYSMVKYC-----INGKDCRRVLISRHFAEVWDDTHC 479
Query: 465 EKLQQVNLFCMVV------LAGHAQCIISLLQDIQDNNQRLTMLQLVDKM------KIKL 512
+KL F V + GH Q ++++++ Q +LT L+LVD K +L
Sbjct: 480 DKLCDRCFFKDRVQLPEQDITGHYQTLLAIIRRAQTLQTKLTALKLVDAWYHKGSPKNRL 539
Query: 513 KEIDSDLKREEIEQLVLQLIIDRVL---VRIGPFSPGKKIIK 551
+ L R EQ+V L+++ L +I P+S I+K
Sbjct: 540 ETPPPLLDRFIGEQIVAHLLVNGYLKEDFQITPYSTFSYIVK 581
>gi|346466659|gb|AEO33174.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/509 (42%), Positives = 308/509 (60%), Gaps = 35/509 (6%)
Query: 65 AVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A +W+ + F W + +VF I + R+ Q IN LS +D ++IM+ GGGKSLCY
Sbjct: 2 AGTDWTKSDFPWSQHVKEKLESVFHIGSLRSMQLPAINVTLSNKDCILIMSTGGGKSLCY 61
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
QLPA++ +GI +VVSPLLSL++DQVM L +L P ML++ S ++ I K++
Sbjct: 62 QLPALISKGITVVVSPLLSLMEDQVMALHSLSYPVAMLSANVSMKETSRILKSIADESSS 121
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK+LYVTPEK++KSKRFMS LEK + R + ++IDE HCCSQWGHDFRPDYK L I+K
Sbjct: 122 LKLLYVTPEKMAKSKRFMSTLEKAYQRNRFARLAIDEVHCCSQWGHDFRPDYKYLAIMKR 181
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
FP VP++ +TATA+ + D+ +ML I + + ++RPNL Y V K + ++
Sbjct: 182 HFPKVPILGVTATASASIVADVQKMLDIECSVVLRAPLDRPNLVYEVLPKPAGSDEAVNM 241
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
+AK I + + + GIVYCFS +E +++A +L+ GI+AD YHA M+ R VH W +
Sbjct: 242 VAKLILGRFKD-QCGIVYCFSIRETDELADQLKGYGIAADSYHAQMEPQRRSNVHTSWMR 300
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
+L VIV T+AFGMGI+KP+VRFVIHH+LSKS+E YYQESGRAGRD PS C++ FR AD
Sbjct: 301 GELSVIVATIAFGMGIDKPNVRFVIHHTLSKSIENYYQESGRAGRDDQPSTCVILFRFAD 360
Query: 424 VPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF-----EKLQQVNL---FC- 474
V RQ++ VF E G +N+Y +VRY ++ K R +F EK Q + C
Sbjct: 361 VFRQTTSVFAEKCGQENVYSVVRYCV-----DVHKCRRAMFLQHFGEKQQDIQCQYGICD 415
Query: 475 ---------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLKE---IDSD 518
+ + H + I +L ++LT +++D K K KE +D
Sbjct: 416 NCRAKGSVKDIDVTAHIKNIYKVLAAASAAKEQLTAAKVIDAWTGKDAKKWKERGVTKTD 475
Query: 519 LKREEIEQLVLQLIIDRVLV---RIGPFS 544
L RE E ++ +++ L I P++
Sbjct: 476 LPRERCETIMAWALLEGYLAEKFHITPYA 504
>gi|170064539|ref|XP_001867566.1| ATP-dependent DNA helicase Q1 [Culex quinquefasciatus]
gi|167881896|gb|EDS45279.1| ATP-dependent DNA helicase Q1 [Culex quinquefasciatus]
Length = 701
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/444 (45%), Positives = 292/444 (65%), Gaps = 21/444 (4%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
I +ELE V+AE+ + + K+L+ ++Q R+ ++KS S A
Sbjct: 19 INRELEEVDAELARLTARRKKLLQLKEQYRVRELQVKS------------------SELA 60
Query: 66 VENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
++W+ W V VF + +R+ Q IN +LS DV+++ GGGKSLC+Q
Sbjct: 61 KQDWNAEGHAWSGTVRQVLGEVFRMADFRSQQLPAINGILSKHDVILLAPTGGGKSLCFQ 120
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE- 183
LPA++ +GI +VVSPL+SL++DQV L LG+ A L++ K+ + K L G+ E
Sbjct: 121 LPALVADGITVVVSPLISLMEDQVWALKKLGVKAEYLSANIDKDVVNNVNKLLRDGDTEQ 180
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++Y+TPE+++KS RFMS L+KC++A +L+ +IDE HCCSQWGHD+RPDYK L +LK
Sbjct: 181 LKIVYITPERMAKSNRFMSALQKCYNAKKLAQFAIDEVHCCSQWGHDYRPDYKLLAVLKK 240
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
+PDVP++ +TATAT KV ND+ +ML +R+C+ F + NRPNL+Y V EK S + + D
Sbjct: 241 MYPDVPILGVTATATAKVLNDVQKMLGLRECLIFNAPFNRPNLYYHVLEKPSDKEELYDM 300
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
+A+ ++ Y N SGI+Y F+ KE E+++ +L QR + YHA +D R + H RW
Sbjct: 301 LAELMKGRYRNM-SGIIYTFTVKETEEISTQLLQRDVKVIPYHAYLDAKQRSRTHQRWMS 359
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
N++Q +V TVAFGMGI+K DVRFVIHH++SKS+E +YQESGRAGRDG ++C+L +R D
Sbjct: 360 NEVQAVVATVAFGMGIDKADVRFVIHHTISKSMENFYQESGRAGRDGRRADCILLYRFMD 419
Query: 424 VPRQSSMVFYENSGLQNLYDIVRY 447
+ R S+M F E GL NLY +V+Y
Sbjct: 420 LFRLSTMSFQEYEGLSNLYSMVKY 443
>gi|237830999|ref|XP_002364797.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211962461|gb|EEA97656.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|221507678|gb|EEE33282.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 932
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/478 (46%), Positives = 296/478 (61%), Gaps = 45/478 (9%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSST 64
E+ Q LE+VEA QI L + QL E +++L + L+ + T
Sbjct: 79 EVSQRLEDVEA-------QIAMLKTERMQLREEEADLTAQLKRNRLGSTARCTSDSEKQT 131
Query: 65 AVE-NWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
++E +WS F W S + L FGI +R NQ+E++N +LS D L+IM GGGKSLC
Sbjct: 132 SLEPDWSSRDFPWTSALETAALRFFGIRDFRFNQREVMNTILSSHDALLIMPTGGGKSLC 191
Query: 123 YQLPAVLREGIA----LVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
+QLPA++ +G A L+VSPLLSL+ DQV L AL + A L++T+SK+++ + L+
Sbjct: 192 FQLPALI-DGAASRLTLIVSPLLSLMADQVAALRALRLHAFYLSATSSKDEKDEASRVLK 250
Query: 179 KGEGELK----------------------------MLYVTPEKISKSKRFMSKLEKCHHA 210
+ EG+ +YVTPE+I+KSK+ MS+LEK H A
Sbjct: 251 RLEGKAAASQSQKGQKTENRSAVSPDRSSENLGAVFVYVTPERIAKSKKLMSQLEKIHAA 310
Query: 211 GRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLH 270
L LI +DEAHC SQWGH FR DY+ L +LKTQFP VP++ALTATAT V +D+ +MLH
Sbjct: 311 KNLGLIVVDEAHCASQWGHSFRQDYRQLILLKTQFPRVPLLALTATATPPVVDDIKKMLH 370
Query: 271 IRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQ 330
I F S NR NLFY V K + I IA +I+ N +SGI+YC SRKE E
Sbjct: 371 IPYSRVFRSHTNRANLFYHVVHKPKTSEEQIRLIADFIKAF--NGQSGILYCLSRKEAET 428
Query: 331 VAQEL-RQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIH 389
+ L R IS +YH D+D N+R ++H +WS + V+V TVAFGMGINK DVRFV+H
Sbjct: 429 LCVALKRDFRISCAFYHGDLDANSRLEIHRQWSTGYISVVVATVAFGMGINKADVRFVVH 488
Query: 390 HSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRY 447
HSL KS++ YYQE+GRAGRDG P+ CLL +RP+DV RQS MV++E SGL+ LY++VR+
Sbjct: 489 HSLPKSLDNYYQETGRAGRDGSPAHCLLLYRPSDVSRQSVMVYWEPSGLRLLYEMVRF 546
>gi|221487894|gb|EEE26126.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
Length = 932
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/478 (45%), Positives = 296/478 (61%), Gaps = 45/478 (9%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSST 64
E+ Q LE+VEA QI L + QL E +++L + L+ + T
Sbjct: 79 EVSQRLEDVEA-------QIAMLKTERMQLREEEADLTAQLKRNRLGSTARCTSDSEKQT 131
Query: 65 AVE-NWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
++E +WS F W S + L FGI +R NQ+E++N +LS D L+IM GGGKSLC
Sbjct: 132 SLEPDWSSRDFPWTSALETAALRFFGIRDFRFNQREVMNTILSSHDALLIMPTGGGKSLC 191
Query: 123 YQLPAVLREGIA----LVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
+QLPA++ +G A L+VSPLLSL+ DQV L AL + A L++T+SK+++ + L+
Sbjct: 192 FQLPALI-DGAASRLTLIVSPLLSLMADQVAALRALRLHAFYLSATSSKDEKDEASRVLK 250
Query: 179 KGEGELK----------------------------MLYVTPEKISKSKRFMSKLEKCHHA 210
+ EG+ +YVTPE+I+KSK+ MS+LEK H A
Sbjct: 251 RLEGKAAASQSQKGQKTENRSAVSPDRSSENLGAVFVYVTPERIAKSKKLMSQLEKIHAA 310
Query: 211 GRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLH 270
L LI +DEAHC SQWGH FR DY+ L +LKTQFP VP++ALTATAT V +D+ +MLH
Sbjct: 311 KNLGLIVVDEAHCASQWGHSFRQDYRQLILLKTQFPRVPLLALTATATPPVVDDIKKMLH 370
Query: 271 IRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQ 330
I F S NR NLFY V K + I IA +I+ N +SGI+YC +RKE E
Sbjct: 371 IPYSRVFRSHTNRANLFYHVVHKPKTSEEQIRLIADFIKAF--NGQSGILYCLTRKEAET 428
Query: 331 VAQEL-RQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIH 389
+ L R IS +YH D+D N+R ++H +WS + V+V TVAFGMGINK DVRFV+H
Sbjct: 429 LCVALKRDFRISCAFYHGDLDANSRLEIHRQWSTGYISVVVATVAFGMGINKADVRFVVH 488
Query: 390 HSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRY 447
HSL KS++ YYQE+GRAGRDG P+ CLL +RP+DV RQS MV++E SGL+ LY++VR+
Sbjct: 489 HSLPKSLDNYYQETGRAGRDGSPAHCLLLYRPSDVSRQSVMVYWEPSGLRLLYEMVRF 546
>gi|312379036|gb|EFR25440.1| hypothetical protein AND_09184 [Anopheles darlingi]
Length = 532
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 265/382 (69%), Gaps = 3/382 (0%)
Query: 68 NWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLP 126
+W +F+W ++ VF + +R Q INA+L+G DVL++ GGGKSLC+QLP
Sbjct: 64 DWDKESFDWSAKVRKTLSEVFHLQDFRPQQLRTINALLAGHDVLLLAPTGGGKSLCFQLP 123
Query: 127 AVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL-EKGEGELK 185
A++ G+ +V+SPL+SL++DQV L L I A +L STT + + I +++ + +K
Sbjct: 124 ALITPGLTVVISPLVSLMEDQVWSLQKLKIAAKLLCSTTERSEANEILRSMANPSQSTVK 183
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPE++SKSKRFMS L+KC G+L +IDE HCCSQWGHDFRPDYK LG+LK F
Sbjct: 184 LLYVTPERMSKSKRFMSALQKCFSNGQLDRFAIDEVHCCSQWGHDFRPDYKYLGVLKELF 243
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P +P++ +TATAT V D+ +ML I I FV++ NRPNL+Y V EK + K E+
Sbjct: 244 PKIPVLGVTATATAAVIKDVQKMLRIPNSILFVASFNRPNLYYHVLEKP-LSKKDQYEVL 302
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
+ + E + +SGIVY FS K+ E++++ELR+RG+ YHA + R K+H W N+
Sbjct: 303 ESLLEKRFHKQSGIVYTFSIKDAEEISEELRERGLKVAPYHATLPAADRTKIHQLWIANR 362
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
LQ ++ TVAFGMGI+KPDVRFVIHH+LSKS+E +YQE+GRAGRDG P++C+L + +D+
Sbjct: 363 LQAVIATVAFGMGIDKPDVRFVIHHTLSKSMENFYQETGRAGRDGQPADCILLYHFSDMF 422
Query: 426 RQSSMVFYENSGLQNLYDIVRY 447
R S+M+F E +GLQN Y +V Y
Sbjct: 423 RISTMMFSEYTGLQNAYAMVDY 444
>gi|332027185|gb|EGI67277.1| ATP-dependent DNA helicase Q1 [Acromyrmex echinatior]
Length = 599
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 287/443 (64%), Gaps = 17/443 (3%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSELK--SLLEAFEASRGSPIQYGGSSSTA 65
E+ ++ E++ ++ +++L DR+ L +R+ +L+ +LL+ S S +
Sbjct: 22 NEIAAIDYELQQIENDLQKLQDRRRLLTQRKEKLRDDALLKK-------------SFSLS 68
Query: 66 VENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
+NW+ F W + + NVF I R Q +NA++S DV++IM GGGKSLCYQ
Sbjct: 69 KKNWNNADFIWSVKLTETLKNVFKIEKLRELQLPTMNAIMSKEDVILIMPTGGGKSLCYQ 128
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPAV+ +GI +V+SPL+SL++DQ+ L L I A ML + KE K AL L
Sbjct: 129 LPAVMSKGITVVISPLVSLMEDQLHGLRKLDIKATMLCAKADKESIKMTMTALVDKSCPL 188
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K++Y+TPE ++KS RFM+KL+K + G L +IDE HCCSQWGHDFRPDYK LG+LK+
Sbjct: 189 KLIYITPEYMAKSNRFMNKLQKAYELGHLERFAIDEVHCCSQWGHDFRPDYKFLGVLKSM 248
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FP VP++ LTATA K+ D+ +ML I C+ ++ NRPNL+Y VR K + + + I
Sbjct: 249 FPGVPILGLTATAPTKIIVDVQKMLDISGCLILRASFNRPNLYYEVRRKPADKETCLAMI 308
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N +SGI+Y + K+ EQ+ +LR RGI A YHA ++ N R +V+ +W
Sbjct: 309 ENLLKNRF-NGKSGIIYTTTIKDAEQLTTDLRGRGIKAGCYHAMLEANYRSEVYSKWMSG 367
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
K QV+V T+AFG+GI+KPDVRFVIHH +SKS+E +YQESGRAGRDG S CL+ +R AD+
Sbjct: 368 KYQVVVATIAFGLGIDKPDVRFVIHHCVSKSMENFYQESGRAGRDGKKSVCLVLYRLADI 427
Query: 425 PRQSSMVFYENSGLQNLYDIVRY 447
+ S+MVF + GLQNLY ++ Y
Sbjct: 428 FKLSTMVFQDKVGLQNLYKVLAY 450
>gi|238859683|ref|NP_001154966.1| RecQ protein 1 [Nasonia vitripennis]
Length = 598
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/449 (45%), Positives = 286/449 (63%), Gaps = 21/449 (4%)
Query: 3 TEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS---LLEAFEASRGSPIQYG 59
TEE E+ ++ E+R ++ + ++L DR+ L +R+ +LK L ++F S+
Sbjct: 20 TEE--DEIAAIDYELRQIETEQQKLEDRKKVLLDRKQKLKDNALLKKSFNLSK------- 70
Query: 60 GSSSTAVENWS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
+NW F W +VF I R Q + +NA +S DV++IM GGG
Sbjct: 71 -------KNWDLEKFPWSKNLKKALTDVFKIKELRPLQLQTMNASMSNEDVILIMPTGGG 123
Query: 119 KSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
KSLCYQLPAV+ +G+ +VVSPL++L++DQ+ L L + A ML++ KED K I L
Sbjct: 124 KSLCYQLPAVIGKGVTIVVSPLVALMEDQLNGLHKLKVNAKMLSAKAPKEDVKAIMTGLV 183
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
+ +LK++YVTPE ++KS RFMSKL+K RL +IDE HCCSQWGHDFRPDYK L
Sbjct: 184 DNKSDLKLVYVTPEYMAKSNRFMSKLQKAFEMKRLDRFAIDEVHCCSQWGHDFRPDYKFL 243
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
GILK+ FPDVP++ LTATA K+ D+ +ML I+ C+ ++ NRPNLFY VR K S +
Sbjct: 244 GILKSMFPDVPLLGLTATAPAKIIVDVQKMLDIQGCLVLRASFNRPNLFYEVRRKPSDKE 303
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
++ I ++ + +SGI+Y + KE EQ+ +LR RG+ YHA ++ R KV+
Sbjct: 304 ACLEMIVSLLKNRF-EGKSGIIYTTTIKESEQLTTDLRARGLRIGCYHAMLEPEYRTKVY 362
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
+W + Q +V T+AFG+GI+KPDVRFVIHH LSKS+E YQESGRAGRDG S C+L
Sbjct: 363 SKWFSGEYQAVVATIAFGLGIDKPDVRFVIHHCLSKSMENLYQESGRAGRDGEKSYCILL 422
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRY 447
+R DV + S+MVF + GLQNLY I+ Y
Sbjct: 423 YRLMDVFKLSTMVFQDKVGLQNLYKILNY 451
>gi|355336772|gb|AER57871.1| ATP-dependent DNA helicase RecQ family protein [Acytostelium
subglobosum]
Length = 1147
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 271/394 (68%), Gaps = 16/394 (4%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
W+G + W + + VFG ++R NQ EIINA +SG DV V+M GGGKSLCYQ+PA+
Sbjct: 468 WAGKYSWTDEVERINRTVFGNRSWRKNQVEIINACMSGHDVFVLMPTGGGKSLCYQIPAM 527
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
EG+ +++SPL+SLIQDQVM L L PA LT TTS ED IY+ L + LK+LY
Sbjct: 528 CNEGVTIIISPLISLIQDQVMLLQTLAYPAAALTGTTSSEDVTQIYRDLRQTPPTLKLLY 587
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPEK+ +S M ++ G L+ IDEAHC SQWGHDFRP+YK L +LKT+FP +
Sbjct: 588 LTPEKVVQSPAIMDLFRNLNNNGLLARAVIDEAHCVSQWGHDFRPNYKELKLLKTEFPSL 647
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P++ALTATAT++V+ D++ LH++ I F + NRPNL Y V +KS K ++D+IA++I
Sbjct: 648 PILALTATATERVKKDVIFNLHMKNPITFKQSFNRPNLQYAVVKKS---KKIVDDIAEFI 704
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ YP +SGIVYC SR +C VA ELR++G+ A++YHA+M+ + R++ W+++++++
Sbjct: 705 NKFYP-GKSGIVYCISRNDCVTVASELRKKGLRANFYHANMEPDERQRTQESWTRDRIKI 763
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
IV T+AFGMGINKPDVRFVIHHSL KS+E YYQESGRAGRDG S C+L++ D RQ
Sbjct: 764 IVSTIAFGMGINKPDVRFVIHHSLPKSLEGYYQESGRAGRDGNLSHCILYYSFGDKFRQE 823
Query: 429 SMVFYENS----------GLQNLYDIVRYSQYPL 452
V +NS ++NL IV Y + P+
Sbjct: 824 --VLIKNSTGSTHASIRENMENLNRIVGYCENPV 855
>gi|401412075|ref|XP_003885485.1| hypothetical protein NCLIV_058800 [Neospora caninum Liverpool]
gi|325119904|emb|CBZ55457.1| hypothetical protein NCLIV_058800 [Neospora caninum Liverpool]
Length = 962
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/477 (45%), Positives = 294/477 (61%), Gaps = 43/477 (9%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYG-GSSS 63
EI Q LE+VE+ + +++ + + QL E +++L + L+ + G G S
Sbjct: 82 EIRQRLEDVESHIAILKTE-------RVQLREEEADLTAQLKRNRSCGAQRCTSGSGEQS 134
Query: 64 TAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
+WS F W + L FGI +R NQ+E++N VLS RD L+IM GGGKSLC
Sbjct: 135 PQEPDWSSRDFPWTPALEKAALRFFGIQDFRFNQREVMNTVLSSRDALLIMPTGGGKSLC 194
Query: 123 YQLPAVLREG---IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTT---SKEDEKFIYKA 176
+QLPA++ + L+VSPLLSL+ DQV L AL + A L++T+ K++ + K+
Sbjct: 195 FQLPALIHGASSHLTLIVSPLLSLMADQVAALRALRLQAFYLSATSLKDEKDEASGVLKS 254
Query: 177 LEKGEGELK-------------------------MLYVTPEKISKSKRFMSKLEKCHHAG 211
LE G + LYVTPE+I+KSK+ MS+LEK + A
Sbjct: 255 LEGTSGCSQTQKRQKTEKVAAVSPDQSSDEPGAVFLYVTPERIAKSKKLMSQLEKIYAAK 314
Query: 212 RLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHI 271
L+LI +DEAHC SQWGH FR DY+ L +LKTQFP VP++ALTATAT V +D+ +MLHI
Sbjct: 315 NLALIVVDEAHCASQWGHSFRQDYRQLILLKTQFPRVPLLALTATATPPVVDDIKKMLHI 374
Query: 272 RKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQV 331
F S NR NLFY V K + I IA +I+ N +SGI+YC SRKE E +
Sbjct: 375 PHSRVFRSHTNRANLFYHVVHKPKTSEEQIRLIADFIRAF--NGQSGILYCLSRKEAEIL 432
Query: 332 AQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHH 390
L+ IS +YH D+D N+R ++H +WS + V+V TVAFGMGINK DVRFV+HH
Sbjct: 433 CVALKHDFQISCAFYHGDLDANSRLEIHRQWSAGYVSVVVATVAFGMGINKADVRFVVHH 492
Query: 391 SLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRY 447
SL KSV+ YYQE+GRAGRDG P+ CLL +RP+DV RQS MV++E SGL+ LY++VR+
Sbjct: 493 SLPKSVDNYYQETGRAGRDGSPAHCLLLYRPSDVSRQSVMVYWEPSGLRLLYEMVRF 549
>gi|255083412|ref|XP_002504692.1| predicted protein [Micromonas sp. RCC299]
gi|226519960|gb|ACO65950.1| predicted protein [Micromonas sp. RCC299]
Length = 531
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/445 (47%), Positives = 291/445 (65%), Gaps = 31/445 (6%)
Query: 80 DDVRLNVFGIP-AYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL-REGIALVV 137
D + +VF I +R Q+ +INA LSGRDV V+M AGGGKSL YQLPA++ + LVV
Sbjct: 2 DSILADVFRITTGFRPAQRGVINATLSGRDVFVVMPAGGGKSLTYQLPAIIDAPKLTLVV 61
Query: 138 SPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE-------LKMLYVT 190
SPLLSLI+DQV + A+G+ A LT+ TS E++ + L+ E L +LYVT
Sbjct: 62 SPLLSLIEDQVEQMNAIGVGARALTAATSSEEQNETLRLLDDPETRPDPTPPRLCLLYVT 121
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPM 250
PEK++KSKR ++KLEK H AGRL+ + +DEAHC S WGH+FRPDY+ LGI KTQFP VP+
Sbjct: 122 PEKVAKSKRLITKLEKAHRAGRLARVVLDEAHCVSAWGHEFRPDYRKLGIFKTQFPSVPV 181
Query: 251 MALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI-- 308
+A TATAT +VQ D++++L IR C KF +++ RPNL Y V K S K D + + +
Sbjct: 182 LACTATATPRVQRDVIDVLQIRGCAKFRTSVQRPNLRYEVVLKPSAKKDSDDLLCRIVLG 241
Query: 309 -----QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
PN + IVYCFS++E EQ A+ L GI++ YHA +R VH RWS+
Sbjct: 242 AMGPDATPKPNCGAAIVYCFSQREAEQCAEVLTNGGITSLPYHAGYTEESRRAVHTRWSR 301
Query: 364 -NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
+ ++V+ TVAFGMG+NKPDVR V+HH++SKSVE+YYQESGRAGRDG + C++ +RPA
Sbjct: 302 GDSVRVMCATVAFGMGVNKPDVRLVVHHTVSKSVESYYQESGRAGRDGKRARCVVMWRPA 361
Query: 423 DVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF--EKLQQVNLFCMVVLAG 480
DVPRQSSMV + ++G +NL ++ R ++ + L E ++ AG
Sbjct: 362 DVPRQSSMVAF-DAGSENLGNLYRSCRWLTSTGCRRASLAAHFGETTRET--------AG 412
Query: 481 H-AQCIISLLQDIQDNNQRLTMLQL 504
A+C + L++ +D ++ +TMLQL
Sbjct: 413 SVAECFMRLVE--KDPDKPVTMLQL 435
>gi|302772997|ref|XP_002969916.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
gi|300162427|gb|EFJ29040.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
Length = 703
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 253/361 (70%), Gaps = 9/361 (2%)
Query: 69 WSGT-FEW--DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
WS + F W D +A++ R FG ++R NQ EIINA +SG DV V+M GGGKSL YQL
Sbjct: 13 WSRSDFPWSMDLKANNRRY--FGNKSFRPNQHEIINATMSGHDVFVLMPTGGGKSLTYQL 70
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ G+ LVV PL+SLI DQ+M L+ I A L+S E+++ I + L E +
Sbjct: 71 PAICCPGVTLVVCPLVSLIMDQIMHLSQASIRAEHLSSNLEYEEQRQILQQLNFDHCEYR 130
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPEKI++S + LE H L+ I IDEAHC SQWGHDFRPDY+NLGILK +F
Sbjct: 131 LLYVTPEKIARSDNLLRNLENLHRRRLLARIVIDEAHCVSQWGHDFRPDYQNLGILKQKF 190
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
PDVP+MALTATAT +V+ D+++ L + KCI F T NRPNL Y V K+ K V +EI
Sbjct: 191 PDVPLMALTATATMRVKEDVVQALGLCKCIIFRQTFNRPNLRYSVVPKT---KKVYEEID 247
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
+I+E+YP+ ESGI+YCFS+ +CE+V ++LR+ G +YHA MD R +V WSK++
Sbjct: 248 AFIKENYPH-ESGIIYCFSKMDCERVCEQLRKTGHKIGFYHASMDPQERNRVQRMWSKDE 306
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
+ +I TVAFGMGINKPDVRFVIHHS+ KS+E Y+QESGRAGRD LP+ C+L++ +D
Sbjct: 307 INIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQESGRAGRDNLPASCILYYSYSDYV 366
Query: 426 R 426
R
Sbjct: 367 R 367
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 581 LDELRKELAS-ISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLE-KIIGKLKTGKYG 638
L +LR E+ + I G +LP+ ++ + + IS R P T++E LE IGK+K+ KYG
Sbjct: 609 LQKLRTEIMNEIGGNLLPYHIMGNGELHQISKRLPKTVDEL----LEINGIGKVKSNKYG 664
Query: 639 SRILEVISKCGNSEQQHDN-----NAVSKEEQGRDARAS 672
+RILEV+ + D +A S ++ RDA S
Sbjct: 665 ARILEVVDQVVREHSSSDKTRNKVSAASMPKRQRDAPDS 703
>gi|308512775|gb|ADO33041.1| recQ helicase [Biston betularia]
Length = 446
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/373 (49%), Positives = 254/373 (68%), Gaps = 1/373 (0%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIA 134
W + +R++ F I +R Q I S ++ +V+M G GKSLCYQLPA++ G+
Sbjct: 4 WSDAIEKIRIDAFQIDEFRPKQLSAIKFNSSKQNSIVVMPTGAGKSLCYQLPALVEPGLT 63
Query: 135 LVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKI 194
+V+SPL+SL++DQ+ L IPA +TS++ KE+ L+ ++K+LYVTPE+
Sbjct: 64 IVISPLISLMEDQIRSLTKRNIPAKHMTSSSPKEETNAALNILKDKNSDIKLLYVTPERF 123
Query: 195 SKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALT 254
+KSKRFMS L+KC+ GRL I+IDE HCCSQWGHDFRPDYK LGIL FP++P++ LT
Sbjct: 124 AKSKRFMSNLQKCYADGRLQRIAIDEVHCCSQWGHDFRPDYKFLGILSNMFPNIPILGLT 183
Query: 255 ATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPN 314
ATAT +V ND+ ++L+I C+ S NRPNL+Y EK + + + K ++ Y N
Sbjct: 184 ATATARVLNDVQKILNIPGCLIIKSRFNRPNLYYTAIEKPTSQDDCLSILEKLLKHRYKN 243
Query: 315 SESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
ESGI+Y S K+ E+++Q L +RG+ YHA+MD +AR KVH++W Q IV TVA
Sbjct: 244 -ESGIIYTNSIKDTEEISQGLCKRGLKVGCYHANMDSDARTKVHLKWHDKHYQAIVATVA 302
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYE 434
FGMGI+KPDVRFVIHH++SKS+E YYQESGRAGRDGL +EC+ +R DV + S+MVF
Sbjct: 303 FGMGIDKPDVRFVIHHTISKSMENYYQESGRAGRDGLRAECVTMYRMQDVFKVSTMVFSS 362
Query: 435 NSGLQNLYDIVRY 447
L +LY +V+Y
Sbjct: 363 VGSLDHLYGMVKY 375
>gi|324502777|gb|ADY41219.1| ATP-dependent DNA helicase Q1 [Ascaris suum]
Length = 502
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/335 (54%), Positives = 241/335 (71%), Gaps = 1/335 (0%)
Query: 113 MAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKF 172
M+ GGGKSLCYQLPAVL GI LVVSPL+SLI+DQ++ LA LGI A L +TSK++
Sbjct: 1 MSTGGGKSLCYQLPAVLLSGITLVVSPLVSLIEDQLLQLAKLGIEAATLNQSTSKDEAAR 60
Query: 173 IYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFR 232
I KAL ++LYVTPEK++KSKR M++LEKC GRL +++IDE HCCSQWGHDFR
Sbjct: 61 IQKALTDPNSSFRLLYVTPEKLAKSKRVMNRLEKCAEMGRLKVVAIDEVHCCSQWGHDFR 120
Query: 233 PDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVRE 292
PD+K L +LK QF VP++ LTATAT V +D+ +L I + F + NRPNL+Y VR
Sbjct: 121 PDFKFLNVLKRQFKGVPILGLTATATADVIDDVKNILSIPAAVVFRAGFNRPNLYYEVRN 180
Query: 293 KSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDIN 352
K S + +DE+ I + + + +SGI+YCFSRKECE + LR R I A +YHA ++ +
Sbjct: 181 KPSSSEQFLDELVSLINDRF-DGQSGIIYCFSRKECEDLTHALRSRKIKAAHYHAYLESD 239
Query: 353 AREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLP 412
R + H RW ++ VIV TVAFGMGI+K DVR+VIHHS++KS+E YYQESGRAGRDG
Sbjct: 240 KRSRTHERWIGGEVDVIVATVAFGMGIDKTDVRYVIHHSMAKSMENYYQESGRAGRDGKQ 299
Query: 413 SECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRY 447
+ C+L++R D+ RQS+MV E +G+ NLY ++ Y
Sbjct: 300 ATCILYYRLGDLFRQSTMVCTEKTGVSNLYSMLAY 334
>gi|383853399|ref|XP_003702210.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Megachile rotundata]
Length = 597
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/442 (45%), Positives = 284/442 (64%), Gaps = 17/442 (3%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELK--SLLEAFEASRGSPIQYGGSSSTAV 66
E+ ++ E++ ++ +I++L DR+ L +R+ +L+ +LL+ S +
Sbjct: 23 EIAAIDYELKQIETEIQKLEDRKKILVQRKEKLRDDALLKK-------------SLYVSK 69
Query: 67 ENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
++W+ F W +VF I R Q +NAV+S DV++IM GGGKSLCYQL
Sbjct: 70 KDWNKEDFSWSKDLRKALKDVFKIDKLRELQLPTMNAVMSNEDVILIMPTGGGKSLCYQL 129
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PAV+ +GI +VVSPL+SL++DQ+ L + A ML++ +KED K I AL + +LK
Sbjct: 130 PAVISKGITIVVSPLVSLMEDQLHGLHKNNVKAMMLSAKGNKEDVKIIMNALIDKKSDLK 189
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPE ++KS RFMSKL+K RL +IDE HCCSQWGHDFRPDYK LGILK+ F
Sbjct: 190 LIYVTPEYMAKSNRFMSKLQKAFELKRLDRFAIDEVHCCSQWGHDFRPDYKFLGILKSMF 249
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP++ LTATA K+ D+ +ML I+ C+ +T NRPNLFY VR K S + I
Sbjct: 250 PGVPILGLTATAPAKIIVDVQKMLDIQGCLVLRATFNRPNLFYEVRRKPSDKSTCLAMIE 309
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
++ + + +SGI+Y + K+ EQ+ ELR GI YHA ++ R +V+ +W K
Sbjct: 310 NLLKNRFKD-KSGIIYTTTIKDAEQLTTELRSLGIKVGCYHAMLEPEYRSEVYSKWISGK 368
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
Q +V T+AFG+GI+KPDVRFVIHH +SKS+E +YQESGRAGRDG S C++ +R DV
Sbjct: 369 YQAVVATIAFGLGIDKPDVRFVIHHCISKSMENFYQESGRAGRDGKKSACIVLYRLPDVF 428
Query: 426 RQSSMVFYENSGLQNLYDIVRY 447
+ S+MVF + GLQNLY ++ Y
Sbjct: 429 KLSTMVFQDKVGLQNLYKMLAY 450
>gi|302799268|ref|XP_002981393.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
gi|300150933|gb|EFJ17581.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
Length = 703
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/361 (53%), Positives = 251/361 (69%), Gaps = 9/361 (2%)
Query: 69 WSGT-FEW--DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
WS + F W D +A++ R FG ++R NQ EIINA +SG DV V+M GGGKSL YQL
Sbjct: 13 WSRSDFPWSMDLKANNRRY--FGNKSFRPNQHEIINATMSGHDVFVLMPTGGGKSLTYQL 70
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PA+ G+ LVV PL+SLI DQ+M L+ I A L+S E+++ I + L E +
Sbjct: 71 PAICCPGVTLVVCPLVSLIMDQIMHLSQASIRAEHLSSNLEYEEQRQILQQLNFDHCEYR 130
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPEKI++S + LE H L+ I IDEAHC SQWGHDFRPDY+NLGILK +F
Sbjct: 131 LLYVTPEKIARSDNLLRNLENLHRRRLLARIVIDEAHCVSQWGHDFRPDYQNLGILKQKF 190
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
DVP+MALTATAT +V+ D+++ L + KCI F T NRPNL Y V K+ K V +EI
Sbjct: 191 SDVPLMALTATATMRVKEDVVQALGLCKCIIFRQTFNRPNLRYSVVPKT---KKVYEEID 247
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
+I+E+YP ESGI+YCFS+ +CE+V ++LR+ G +YHA MD R +V WSK++
Sbjct: 248 AFIKENYPR-ESGIIYCFSKMDCERVCEQLRKTGHKIGFYHASMDPQERNRVQRMWSKDE 306
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
+ +I TVAFGMGINKPDVRFVIHHS+ KS+E Y+QESGRAGRD LP+ C+L++ +D
Sbjct: 307 INIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQESGRAGRDNLPASCILYYSYSDYV 366
Query: 426 R 426
R
Sbjct: 367 R 367
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 581 LDELRKELAS-ISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLE-KIIGKLKTGKYG 638
L +LR E+ + I G +LP+ ++ + + IS R P T++E LE IGK+K+ KYG
Sbjct: 609 LQKLRTEIMNEIGGNLLPYHIMGNGELHQISKRLPKTVDEL----LEINGIGKVKSNKYG 664
Query: 639 SRILEVISKCGNSEQQHDN-----NAVSKEEQGRDARAS 672
+RILEV+ + D +A S ++ RDA S
Sbjct: 665 ARILEVVDQVVREHSSSDKTRNKVSAASMPKRQRDAPDS 703
>gi|428164597|gb|EKX33617.1| hypothetical protein GUITHDRAFT_39919, partial [Guillardia theta
CCMP2712]
Length = 360
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/361 (51%), Positives = 251/361 (69%), Gaps = 2/361 (0%)
Query: 68 NWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
+WS FEW V +VF + ++R Q+EIINA LS +D LV++ GGGKSL Y LPA
Sbjct: 1 DWSKDFEWSGETRSVLRDVFRLSSFRPLQEEIINATLSNKDTLVLLPTGGGKSLVYMLPA 60
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
V+R+G+ LVVSPL+SL+ DQV L LGI A +L S + K + K I+ + LK+L
Sbjct: 61 VMRKGLTLVVSPLISLMHDQVSQLRQLGIRAALLCSASDKMETKQIHDEIACEGSSLKLL 120
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPE+++KSK +SKLEKC L + IDEAHC SQWGHDFR DY LGI K Q+PD
Sbjct: 121 YVTPERVAKSKTLLSKLEKCWKMSLLQRVVIDEAHCISQWGHDFRGDYTKLGIFKLQYPD 180
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP+MALTATAT KVQ D+ + L I C F ++++R NL + V+EK+S + ++A+
Sbjct: 181 VPVMALTATATSKVQEDIKDSLQISFCETFRASVDRANLQFEVKEKASNQAASMQQVAEE 240
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINARE-KVHMRWSKNKL 366
I + N GIVYCFS+KE EQ+AQ L+++GI A +YHAD+ + R V+ WS ++
Sbjct: 241 ILSRFTNM-PGIVYCFSKKEAEQLAQYLQEQGIRARFYHADLGVQMRSLYVYEDWSSGRI 299
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
QV+V T+AFGMGINK D RFVIHH++SKS+ YYQE+GRAGRDG P+ CL+ +RP++ R
Sbjct: 300 QVVVATIAFGMGINKLDTRFVIHHTMSKSLSAYYQEAGRAGRDGKPATCLVLYRPSEKQR 359
Query: 427 Q 427
+
Sbjct: 360 R 360
>gi|328789066|ref|XP_396807.4| PREDICTED: ATP-dependent DNA helicase Q1-like [Apis mellifera]
Length = 596
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 287/442 (64%), Gaps = 17/442 (3%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELK--SLLEAFEASRGSPIQYGGSSSTAV 66
E+ ++ E++ ++ +++ L DR+ L +R+ +L+ +LL+ S S +
Sbjct: 22 EITIIDYELKQIESEMQNLEDRKKILIQRKEKLRDDALLKK-------------SLSVSK 68
Query: 67 ENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
++WS F W +VF I R Q +NA++S DV++IM GGGKSLCYQL
Sbjct: 69 KDWSKEDFTWSKNLKKTLKDVFKIEKLRELQLPTMNAIMSNEDVILIMPTGGGKSLCYQL 128
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PAV+ +GI +VVSPLLSL++DQ+ L + A ML++ +KE+ K I AL + +LK
Sbjct: 129 PAVISKGITIVVSPLLSLMEDQIHGLQKHNVKAGMLSAKCNKENVKIIMNALIDKKSDLK 188
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPE ++KS RFM+KL+K RL +IDE HCCSQWGHDFRPDYK LGILK+ F
Sbjct: 189 LIYVTPEYMAKSNRFMNKLQKAFEMKRLDRFAIDEVHCCSQWGHDFRPDYKFLGILKSMF 248
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP++ LTATA K+ D+ +ML I+ C+ +T NRPNLFY VR K + + I
Sbjct: 249 PGVPILGLTATAPAKIIVDVQKMLDIQGCLVLRATFNRPNLFYEVRRKPTDKDTCLAMIE 308
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
++ + + +SGI+Y + K+ EQ+ +LR G+ YHA ++ + R +V+ +W K
Sbjct: 309 NLLKNRFKD-KSGIIYTTTIKDAEQLTTDLRAVGLKVGCYHAMLEADYRSEVYSKWISGK 367
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
Q +V T+AFG+GI+KPDVR+VIHHS+SKS+E++YQESGRAGRDG S C++ ++ D+
Sbjct: 368 YQAVVATIAFGLGIDKPDVRYVIHHSISKSMESFYQESGRAGRDGKKSMCIVLYKLQDIF 427
Query: 426 RQSSMVFYENSGLQNLYDIVRY 447
+ S+MVF + GLQNLY ++ Y
Sbjct: 428 KLSTMVFQDKVGLQNLYKMLAY 449
>gi|380018171|ref|XP_003693009.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1-like
[Apis florea]
Length = 596
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 286/442 (64%), Gaps = 17/442 (3%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELK--SLLEAFEASRGSPIQYGGSSSTAV 66
E+ ++ E++ ++ +++ L DR+ L +R+ +L+ +LL+ S S +
Sbjct: 22 EITAIDFELKQIENEMQNLEDRKKILIQRKEKLQDDALLKK-------------SLSVSK 68
Query: 67 ENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
++WS F W NVF I R Q +NA++S DV++IM GGGKSLCYQL
Sbjct: 69 KDWSKEDFTWSKDLKKTLKNVFKIEKLRELQLPTMNAIMSNEDVILIMPTGGGKSLCYQL 128
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PAV+ +GI +VVSPLLSL++DQ+ L + A ML++ +KE+ K I AL + +LK
Sbjct: 129 PAVISKGITIVVSPLLSLMEDQIHGLQKHNVKAGMLSAKCNKENVKIIMNALIDKKSDLK 188
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPE ++KS RFM+KL+K RL +IDE HCCSQWGHDFRPDYK LGILK+ F
Sbjct: 189 LIYVTPEYMAKSNRFMNKLQKAFEMKRLDRFAIDEVHCCSQWGHDFRPDYKFLGILKSMF 248
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP++ LTATA K+ D+ +ML I+ C+ +T NRPNLFY VR K + + I
Sbjct: 249 PGVPILGLTATAPAKIIVDVQKMLDIQGCLVLRATFNRPNLFYEVRRKPTDKDTCLAMIE 308
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
++ + + +SGI+Y + K+ EQ+ +LR G+ YHA ++ + R +V+ +W K
Sbjct: 309 NLLKNRFKD-KSGIIYTTTIKDAEQLTTDLRAVGLKVGCYHAMLEADYRSEVYSKWISGK 367
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
Q +V T+AFG+GI+KPDVR+VIHH +SKS+E++YQESGRAGRDG S C++ ++ D+
Sbjct: 368 YQAVVATIAFGLGIDKPDVRYVIHHCISKSMESFYQESGRAGRDGKKSMCIVLYKLQDIF 427
Query: 426 RQSSMVFYENSGLQNLYDIVRY 447
+ S+MVF + GLQNLY ++ Y
Sbjct: 428 KLSTMVFQDKVGLQNLYKMLAY 449
>gi|322779042|gb|EFZ09441.1| hypothetical protein SINV_80478 [Solenopsis invicta]
Length = 596
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/450 (43%), Positives = 288/450 (64%), Gaps = 22/450 (4%)
Query: 3 TEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKS---LLEAFEASRGSPIQYG 59
TEE E+ ++ E++ ++ ++++L DR+ L +R+ +L+ L ++F S+
Sbjct: 14 TEE--DEIAAIDYELQQIENELQKLQDRKKLLTQRKDKLRDDALLRKSFSLSK------- 64
Query: 60 GSSSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
NWS F W ++ VF I R Q +NA++S DV++IM GGG
Sbjct: 65 -------RNWSTEDFAWSAKLRKTLKEVFKIEELRELQLPTMNAIMSKEDVILIMPTGGG 117
Query: 119 KSLCYQLPAVL-REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL 177
KSLCYQLPAV+ ++GI +VVSPL+SL++DQ+ L + + A+ML + KE K I AL
Sbjct: 118 KSLCYQLPAVMSKDGITVVVSPLISLMEDQLHGLRKVDVKANMLCAKMDKESVKTIMGAL 177
Query: 178 EKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKN 237
LK++YVTPE ++KS RFM+KL+K + GRL +IDE HCCSQWGHDFRPDYK
Sbjct: 178 VDKSSPLKLIYVTPEYMAKSNRFMNKLQKAYELGRLERFAIDEVHCCSQWGHDFRPDYKF 237
Query: 238 LGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVG 297
LG+LK+ FP +P++ LTATA K+ D+ ++L I C+ ++ NR NL+Y VR K +
Sbjct: 238 LGVLKSMFPGIPILGLTATAPAKIIVDVQKILDISGCLVLRASFNRSNLYYEVRRKPAEK 297
Query: 298 KVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKV 357
+ + + ++ + N +SGI+Y + K+ EQ+ +LR RGI YHA ++ + R +V
Sbjct: 298 ETCLAMMENLLKTRF-NGKSGIIYTTTIKDAEQLTSDLRGRGIKVGCYHAMLEADYRSEV 356
Query: 358 HMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLL 417
+ +W K Q ++ T+AFG+GI+KPDVRFVIHH LSKS+E +YQESGRAGRDG S CL+
Sbjct: 357 YSKWMSGKYQAVIATIAFGLGIDKPDVRFVIHHCLSKSMENFYQESGRAGRDGKKSVCLV 416
Query: 418 FFRPADVPRQSSMVFYENSGLQNLYDIVRY 447
+R AD + S+MVF + GLQNLY ++ Y
Sbjct: 417 LYRLADTFKLSTMVFQDKVGLQNLYKMLAY 446
>gi|170587310|ref|XP_001898420.1| ATP-dependent DNA helicase, RecQ family protein [Brugia malayi]
gi|158594144|gb|EDP32732.1| ATP-dependent DNA helicase, RecQ family protein [Brugia malayi]
Length = 585
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/581 (37%), Positives = 335/581 (57%), Gaps = 62/581 (10%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME ++ +ELE +E ++ ++++ + L++R+ Q+ +R ++
Sbjct: 13 MELSKLDEELERIEGDICTLRKRKRTLLERKAQIEKR-----------------IVERNV 55
Query: 61 SSSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
+ ++ W S F+W + ++F + +R Q+ +INAVLS D LV+M+ G GK
Sbjct: 56 ENESSFRIWDSDEFQWMKDCRRILHDIFKLSDFRPLQRAVINAVLSREDCLVVMSTGSGK 115
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SLCYQLPAV+ +GI LV+SPL++LI+DQ+ L LGI A L +T+K++ I AL
Sbjct: 116 SLCYQLPAVVMKGIVLVISPLVALIEDQLHQLRKLGIDAATLNQSTAKQEVNRIQTALTD 175
Query: 180 GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
+ L++LYVTPEK++KSKR M++LEKC+ RL LI++DE HCCSQWGHDFRPD+K L
Sbjct: 176 SKASLRLLYVTPEKLAKSKRIMNRLEKCNEMKRLKLIAVDEVHCCSQWGHDFRPDFKFLN 235
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
+LK QF VP++ LTATAT V +D+ ML I + F + NRPNL Y V +K S
Sbjct: 236 VLKRQFQAVPLIGLTATATADVIDDVKNMLGIPAAVVFRAGFNRPNLHYSVCQKPSSDAE 295
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHM 359
+D + + I+ R +G+ A +YHA +D R H
Sbjct: 296 FVDILVELIKT-------------------------RAKGVKASHYHAFLDAGKRNITHE 330
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+W + VIV TVAFGMGI+KP+VR+VIHHSL KS+E YYQESGR GRDG + C+LF+
Sbjct: 331 KWLNGGINVIVATVAFGMGIDKPNVRYVIHHSLPKSLENYYQESGRVGRDGNEAHCILFY 390
Query: 420 RPADVPRQSSMVFYENSGLQNLYDIVRY---------SQYPLHWNIE---KVRLVIFEKL 467
R D+ RQS+MV E +G++NLY ++ Y S H+N+E + + +
Sbjct: 391 RLNDLFRQSTMVCTEKTGVRNLYSVLSYCIEASECRRSVIAEHFNVEWNSSLCSKMCDIC 450
Query: 468 QQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQL 527
Q N + + + + ++ +L + +N R+T ++LV+ + K++ S + RE IE L
Sbjct: 451 AQTNAVECIDVTNYWRQMLEVLNAQKTDNNRITGMKLVE---LTWKKV-SSVSRELIELL 506
Query: 528 VLQLIIDRVL---VRIGPFSPGKKIIKLEISSVQKNTADNK 565
V +LI+D L P+S ++ E S +N +D++
Sbjct: 507 VAKLILDGYLKEDFHFTPYSIISYVVPDEKSIAMENRSDHR 547
>gi|340717015|ref|XP_003396985.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1-like
[Bombus terrestris]
Length = 596
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 286/442 (64%), Gaps = 17/442 (3%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELK--SLLEAFEASRGSPIQYGGSSSTAV 66
E+ ++ E++ ++ ++++L DR+ L +R+ +LK +LL+ S S +
Sbjct: 22 EITAIDFELKQIEYEMQKLEDRKQILIQRKEKLKDDALLKR-------------SLSVSK 68
Query: 67 ENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
++W+ F W +VF I R Q +NA++S DV++IM GGGKSLCYQL
Sbjct: 69 KDWTKEDFSWSKDLRKALKDVFKIDKLRELQLPTMNAIMSNVDVILIMPTGGGKSLCYQL 128
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PAV+ +GI +VVSPL+SL++DQ+ L + A ML++ SKE+ K I AL + +LK
Sbjct: 129 PAVISKGITIVVSPLISLMEDQLHGLQKHNVKARMLSAKGSKENVKVIMNALVDKKSDLK 188
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPE ++KS RFM+KL+K RL +IDE HCCSQWGHDFRPDYK LGILK+ F
Sbjct: 189 LIYVTPEYMAKSNRFMNKLQKAFEMKRLDCFAIDEVHCCSQWGHDFRPDYKFLGILKSMF 248
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP++ LTATA K+ D+ +ML I+ C+ +T NRPNLFY VR K + + + I
Sbjct: 249 PGVPVLGLTATAPAKIIVDIQKMLDIQGCLVLRATFNRPNLFYEVRRKPTDKETCLAMIE 308
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
++ + + +SGI+Y + K+ EQ+ +LR G+ YHA ++ + R +V+ +W K
Sbjct: 309 NLLKNRFKD-KSGIIYTTTIKDAEQLTTDLRALGLKVGCYHAMLEADYRSEVYSKWISGK 367
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
Q +V T+AFG+GI+KPDVRFVIHH +SKS+E +YQESGRAGRDG + ++ +R DV
Sbjct: 368 YQAVVATIAFGLGIDKPDVRFVIHHCISKSMENFYQESGRAGRDGKKAVSIVLYRLLDVF 427
Query: 426 RQSSMVFYENSGLQNLYDIVRY 447
+ S+MVF + GLQNLY ++ Y
Sbjct: 428 KLSTMVFQDKVGLQNLYKMLEY 449
>gi|168052509|ref|XP_001778692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669907|gb|EDQ56485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 521
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 242/345 (70%), Gaps = 6/345 (1%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R NQ+EIINA +SGRDV V+M GGGKSL YQLPA+ G+ LVVSPL+SLI D
Sbjct: 10 FGNKSFRLNQREIINATMSGRDVFVLMPTGGGKSLTYQLPAICSAGVTLVVSPLVSLIMD 69
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+M L+ IPA L+ T +++ I + L+ G K+LYVTPEKI++S R L
Sbjct: 70 QIMHLSEANIPAAYLSGTMEWQEQNEILRNLDAGV--YKLLYVTPEKIARSDRLSQHLTS 127
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ I +DEAHC SQWGHDFRPDY+NLG+ K +FPDVP++ALTATAT V+ D++
Sbjct: 128 LYDQRLLARIVVDEAHCVSQWGHDFRPDYQNLGVFKERFPDVPLIALTATATLSVKEDVV 187
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + +CI F T NRPNL Y V KS K +++I K+I+E +PN ESGI+YC SR
Sbjct: 188 RALKLTRCIIFRQTFNRPNLRYEVLPKS---KKCLEDIDKFIRERHPN-ESGIIYCLSRS 243
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+CE+V ++LR+ G +YH MD + R V WSK+++ +I TVAFGMGINKPDVRF
Sbjct: 244 DCEKVTEKLREFGHKVAFYHGQMDPDERSYVQRMWSKDEVNIICATVAFGMGINKPDVRF 303
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
VIHHSL KS+E Y+QESGRAGRD LP+ C+L++ AD R M+
Sbjct: 304 VIHHSLPKSLEGYHQESGRAGRDNLPASCILYYTYADSIRLKHML 348
>gi|330795187|ref|XP_003285656.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
gi|325084382|gb|EGC37811.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
Length = 529
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/360 (49%), Positives = 255/360 (70%), Gaps = 8/360 (2%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R NQ+EIIN+VL +D V+M GGGKSLCYQ+P + ++G+ +VVSPL+SLI+
Sbjct: 4 TFGFNQFRENQREIINSVLDSKDTFVLMPTGGGKSLCYQIPGLYQQGVTIVVSPLISLIE 63
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L AL PA L S + +D K +++ L + ++LYVTPE+++ ++ FM L
Sbjct: 64 DQVKFLLALDYPAAALCSGITSDDAKKVFRDLRSNSPKTRLLYVTPERVASNETFMDILG 123
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ G+ I IDEAHC SQWGHDFRPDYK L IL+ FP VP++ALTATAT+KV+ND+
Sbjct: 124 DLYQKGKFMRIVIDEAHCVSQWGHDFRPDYKELSILRKNFPSVPILALTATATEKVRNDI 183
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L+++K + F + NRPNL+Y V +K K V ++A++I++ YP+ +SGI+YC S+
Sbjct: 184 ILNLNMKKPVCFKQSFNRPNLYYHVMKKP---KDVSKQMAEFIKKQYPD-KSGIIYCLSK 239
Query: 326 KECEQVAQELR-QRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
+CE+++ +L + GI + YYHA M+I++R +V RW K +++VIV T+AFGMGINKPDV
Sbjct: 240 YDCEKISGDLNTEYGIKSAYYHAGMEIHSRNQVQDRWQKGRIKVIVATIAFGMGINKPDV 299
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFY---ENSGLQNL 441
RFV HHS+ KS+E YYQESGRAGRDGL S C+L+++ AD R +++ EN NL
Sbjct: 300 RFVFHHSIPKSLEGYYQESGRAGRDGLKSHCILYYKWADKLRIETLIMLSSKENGTHYNL 359
>gi|66802111|ref|XP_629849.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|60463228|gb|EAL61421.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 1259
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 250/363 (68%), Gaps = 4/363 (1%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
+ G F W + D+ ++FG +R NQ+EIIN+ L G D V+M GGGKSLCYQ+PA+
Sbjct: 504 FKGNFPWSQKIIDINRSMFGFHVFRENQREIINSTLEGNDTFVLMPTGGGKSLCYQIPAL 563
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
++G+ +V+SPL+SLI DQV L LG PA L+S S + +YK + ++++LY
Sbjct: 564 YQKGLTIVISPLISLINDQVEFLETLGYPAAALSSAVSSDAAIDVYKDIRSNSPKIRLLY 623
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE++ KS + L G S I IDEAHC SQWGHDFRPDYK L IL+ +FP V
Sbjct: 624 LTPERVVKSDSLIEILANLDQKGLFSRIVIDEAHCVSQWGHDFRPDYKELSILRRKFPKV 683
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P++ALTATAT++V+ND++ L +R + F + NRPNL Y V +K+ K V+D+++K+I
Sbjct: 684 PILALTATATERVRNDVIYNLSMRNPVCFKQSFNRPNLIYQVLKKT---KQVVDDMSKFI 740
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+YP+ +SGIVYC S+ +CE VA+ LR+ ISA +YHA ++ + R KV W K +++V
Sbjct: 741 HSTYPD-KSGIVYCISKYDCENVAKRLRELKISAAHYHAGLENDERAKVQANWQKGRIKV 799
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
IV T+AFGMGINK DVRFVIHHS+ KS+E YYQESGRAGRDG S CLL+F AD R
Sbjct: 800 IVATIAFGMGINKADVRFVIHHSVPKSLEGYYQESGRAGRDGGISHCLLYFSWADKLRND 859
Query: 429 SMV 431
++
Sbjct: 860 LLI 862
>gi|350408702|ref|XP_003488482.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Bombus impatiens]
Length = 602
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 285/442 (64%), Gaps = 17/442 (3%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELK--SLLEAFEASRGSPIQYGGSSSTAV 66
E+ ++ E++ ++ ++++L DR+ L +R+ +LK +LL+ S S +
Sbjct: 28 EIAVIDFELKQIEYEMQKLEDRKQILTQRKEKLKDDALLKR-------------SLSVSK 74
Query: 67 ENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
++W+ F W +VF I R Q +NA++S DV++IM GGGKSLCYQL
Sbjct: 75 KDWTKEDFSWSKDLRKALKDVFKIDKLRELQLPTMNAIMSNVDVILIMPTGGGKSLCYQL 134
Query: 126 PAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
PAV+ +GI +VVSPL+SL++DQ+ L + A ML++ SKE+ K I AL + +LK
Sbjct: 135 PAVISKGITIVVSPLISLMEDQLHGLQKHNVKAGMLSAKGSKENVKVIMNALVDKKSDLK 194
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPE ++KS RFM+KL+K RL +IDE HCCSQWGHDFRPDYK LGILK+ F
Sbjct: 195 LIYVTPEYMAKSNRFMNKLQKAFEMKRLDCFAIDEVHCCSQWGHDFRPDYKFLGILKSMF 254
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP++ LTATA K+ D+ +ML I+ C+ +T NRPNLFY VR K + + I
Sbjct: 255 PGVPVLGLTATAPAKIIVDIQKMLDIQGCLVLRATFNRPNLFYEVRRKPTDKDTCLAMIE 314
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
++ + + +SGI+Y + K+ EQ+ +LR G+ YHA ++ + R +V+ +W K
Sbjct: 315 NLLKNRFKD-KSGIIYTTTIKDAEQLTTDLRALGLKVGCYHAMLEADYRSEVYSKWISGK 373
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
Q +V T+AFG+GI+KPDVRFVIHH +SKS+E +YQESGRAGRDG + ++ +R DV
Sbjct: 374 YQAVVATIAFGLGIDKPDVRFVIHHCISKSMENFYQESGRAGRDGKKAVSIVLYRLLDVF 433
Query: 426 RQSSMVFYENSGLQNLYDIVRY 447
+ S+MVF + GLQNLY ++ Y
Sbjct: 434 KLSTMVFQDKVGLQNLYKMLEY 455
>gi|328725542|ref|XP_001947924.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/631 (37%), Positives = 338/631 (53%), Gaps = 82/631 (12%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG+ +R NQ E INA L G D V+M GGGKSLCYQLPAV+ +G+ LV+SPL SL+
Sbjct: 449 TFGLHNFRPNQLETINAALLGHDCFVLMPTGGGKSLCYQLPAVISKGVTLVISPLKSLVI 508
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ L +L IP L E+E I+ L E LKMLYVTPEKI+ S + L
Sbjct: 509 DQTEKLKSLDIPTAHLLGNMKPEEENIIFTKLCMSEPGLKMLYVTPEKIAASMKLGQILN 568
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
H G+L+ + IDEAHC S WGHDFRPDYK LG + ++PDVP+MALTATAT +V+ D+
Sbjct: 569 NLHCRGKLARLVIDEAHCVSHWGHDFRPDYKRLGEFRKKYPDVPIMALTATATTRVREDV 628
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L I F+S+ NRPNL Y V K GK + EIA I+E Y N +SGIVYC SR
Sbjct: 629 LHQLQISGTKLFLSSFNRPNLLYKVVPKK--GKSAMAEIANLIKEKYKN-QSGIVYCLSR 685
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
KEC+ A + GI A YHA + R V M+W NK+ ++ T+AFGMGI+KPDVR
Sbjct: 686 KECDNTATYMCNEGIKAISYHAGLSDPKRNDVQMKWITNKVNLVCATIAFGMGIDKPDVR 745
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+V H+SL KS+E YYQESGRAGRDG S C L++ D+ R ++ ++SG
Sbjct: 746 YVFHYSLPKSIEGYYQESGRAGRDGKTSHCFLYYSYQDMHRIRKLIELDDSGNHESKKVH 805
Query: 438 LQNLYDIVRYSQYP--------LHWNIEKV--------RLVIFEKLQQVNLFCMVVLAGH 481
+QNL+ IV Y + L++ E + + Q + F + +
Sbjct: 806 MQNLFRIVSYCENKADCRRTLQLNYFGETFDDNKCISNKETACDNCQNKSAFKYIDVTED 865
Query: 482 AQCIISLLQDIQDN-----NQRLTMLQLVD------KMKIKLKEID--------SDLKRE 522
+ I+ +++I + N T++ ++D KIK D R
Sbjct: 866 SIEIVKTIKEICGSGGGSWNNNFTLIHIIDIFKGSSNQKIKTHNHDKLSLHGRGKQWDRF 925
Query: 523 EIEQLVLQLIIDRVL---------------VRIGPFSPG--KKIIKLEISSVQKNTADNK 565
+ E+L+ +L+++ L VR+GP + + IKL+++S KN + +
Sbjct: 926 DAERLMHKLVLEGYLREEMVASKVDIINAFVRVGPEADKLIRGSIKLKLASASKNKLNIE 985
Query: 566 KSTKRSLTS----------SALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPS 615
++K S T E +D R AS++ + ++V++ Q I+ +S P
Sbjct: 986 TTSKNSNTPVNTVLKEIQEKCYENLMDVCRGLAASLN--VNTNAVMTIQAIQEMSHSLPE 1043
Query: 616 TMEEASSNHLEKIIGKLKTG--KYGSRILEV 644
T EE + KI+G K KYG ++LE+
Sbjct: 1044 TEEE-----MLKIVGVTKANFEKYGRQLLEI 1069
>gi|392575674|gb|EIW68807.1| hypothetical protein TREMEDRAFT_12143, partial [Tremella
mesenterica DSM 1558]
Length = 663
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/478 (41%), Positives = 293/478 (61%), Gaps = 26/478 (5%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSST--AV 66
+L ++AE+ V+ Q++ L L + L++ L+ + S I+ +ST +
Sbjct: 12 KLAELDAEIASVKSQLEPLQQLHAHLISERHTLENQLQKLSTTHRSQIKSSARASTTSGI 71
Query: 67 ENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLP 126
+ +F W VF + +R Q+ +INA + R+++ +M GGGKSL YQLP
Sbjct: 72 DYQGCSFPWSPAIATTLRQVFKLSGFRLCQEGVINAAMDDRNIVCVMPTGGGKSLTYQLP 131
Query: 127 AVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE----KGEG 182
A++ G+ +V+SPLL+LI DQV L LG+ M+T T+K ++ IY+ +E KG
Sbjct: 132 AMMGRGVTVVISPLLALIWDQVRSLKDLGVECAMMTGATTKAEQNQIYEKIEGGSSKGGR 191
Query: 183 ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
EL++ YVTPEK++KSKRFMS LEK + GRL +DEAHCCSQ GHDFRPDYK L +LK
Sbjct: 192 ELRLCYVTPEKVAKSKRFMSALEKANAMGRLPERHVDEAHCCSQLGHDFRPDYKKLSVLK 251
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHI-----------RKCIKFVSTINRPNLFYMVR 291
T FP VP+ A+TAT + K DL+++L + + F + ++R NL Y V
Sbjct: 252 TLFPRVPIQAVTATLSTKTLPDLLKILQLPPVCDGNKANSTGTVFFSAPLHRANLHYKVL 311
Query: 292 EKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQ--RG-ISADYYHAD 348
K S K I+ I +IQ +P +SGI+YC S+K+ E VA ELR+ RG I YHA
Sbjct: 312 PKPSSAKAAIERIGNWIQRKHPG-DSGIIYCLSKKDTETVADELREWSRGQIKTGVYHAG 370
Query: 349 MDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGR 408
+D A+E +H+ W K ++ I T+AFG+GI+K DVR+VIHHS+SKS++ YYQE+GRAGR
Sbjct: 371 VDDAAKEGIHLDWRKGRINCICATIAFGLGIDKGDVRYVIHHSMSKSLDGYYQETGRAGR 430
Query: 409 DGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEK 466
DG S+C+LF+R D R SS+++ + G L++++R++Q +++ R V F K
Sbjct: 431 DGKDSDCVLFYRGQDASRLSSLIYGDVDGTAKLHEMLRFAQ-----DLKTCRKVAFAK 483
>gi|328697674|ref|XP_001952385.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/631 (37%), Positives = 338/631 (53%), Gaps = 82/631 (12%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG+ +R NQ E INA L G D V+M GGGKSLCYQLPAV+ +G+ LV+SPL SL+
Sbjct: 449 TFGLHNFRPNQLETINAALLGHDCFVLMPTGGGKSLCYQLPAVISKGVTLVISPLKSLVI 508
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ L +L IP L E+E I+ L E LKMLYVTPEKI+ S + L
Sbjct: 509 DQTEKLKSLDIPTAHLLGNMKPEEENIIFTKLCMSEPGLKMLYVTPEKIAASMKLGQILN 568
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
H G+L+ + IDEAHC S WGHDFRPDYK LG + ++PDVP+MALTATAT +V+ D+
Sbjct: 569 NLHCRGKLARLVIDEAHCVSHWGHDFRPDYKRLGEFRKKYPDVPIMALTATATTRVREDV 628
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L I F+S+ NRPNL Y V K GK + EIA I+E Y N +SGIVYC SR
Sbjct: 629 LHQLQISGTKLFLSSFNRPNLLYKVVPKK--GKSAMAEIANLIKEKYKN-QSGIVYCLSR 685
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
KEC+ A + GI A YHA + R V M+W NK+ ++ T+AFGMGI+KPDVR
Sbjct: 686 KECDNTATYMCNEGIKAISYHAGLSDPKRNDVQMKWITNKVNLVCATIAFGMGIDKPDVR 745
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+V H+SL KS+E YYQESGRAGRDG S C L++ D+ R ++ ++SG
Sbjct: 746 YVFHYSLPKSIEGYYQESGRAGRDGKTSHCFLYYSYQDMHRIRKLIELDDSGNHESKKVH 805
Query: 438 LQNLYDIVRYSQ--------YPLHWNIEKV--------RLVIFEKLQQVNLFCMVVLAGH 481
+QNL+ IV Y + L++ E + + Q + F + +
Sbjct: 806 MQNLFRIVSYCENKADCRRTLQLNYFGETFDDNKCISNKETACDNCQNKSAFKYIDVTED 865
Query: 482 AQCIISLLQDIQDN-----NQRLTMLQLVD------KMKIKLKEID--------SDLKRE 522
+ I+ +++I + N T++ ++D KIK D R
Sbjct: 866 SIEIVKTIKEICGSGGGSWNNNFTLIHIIDIFKGSSNQKIKTHNHDKLSLHGRGKQWDRF 925
Query: 523 EIEQLVLQLIIDRVL---------------VRIGPFSPG--KKIIKLEISSVQKNTADNK 565
+ E+L+ +L+++ L VR+GP + + IKL+++S KN + +
Sbjct: 926 DAERLMHKLVLEGYLREEMVASKVDIINAFVRVGPEADKLIRGSIKLKLASASKNKLNIE 985
Query: 566 KSTKRSLTS----------SALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPS 615
++K S T E +D R AS++ + ++V++ Q I+ +S P
Sbjct: 986 TTSKNSNTPVNTVLKEIQEKCYENLMDVCRGLAASLN--VNTNAVMTIQAIQEMSHSLPE 1043
Query: 616 TMEEASSNHLEKIIGKLKTG--KYGSRILEV 644
T EE + KI+G K KYG ++LE+
Sbjct: 1044 TEEE-----MLKIVGVTKANFEKYGRQLLEI 1069
>gi|357627945|gb|EHJ77457.1| putative RecQ Helicase [Danaus plexippus]
Length = 527
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 238/335 (71%), Gaps = 1/335 (0%)
Query: 113 MAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKF 172
M G GKSLCYQLPA+++ GI +V+SPL+SL++DQV L IPA ++TST+SK +
Sbjct: 1 MPTGAGKSLCYQLPALIKPGITIVISPLVSLMEDQVRSLTNKNIPAKLMTSTSSKAETTA 60
Query: 173 IYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFR 232
L+ E+K+LYVTPE+++KSKRFMS L+KCH GRL I+IDE HCCSQWGHDFR
Sbjct: 61 TLNVLKDKNTEVKLLYVTPERLAKSKRFMSALQKCHAEGRLQRIAIDEVHCCSQWGHDFR 120
Query: 233 PDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVRE 292
PDYK LGIL FP VP++ LTATAT V ND+ ++L+I C+ ST NRPNL+Y + E
Sbjct: 121 PDYKYLGILSNMFPGVPILGLTATATSHVLNDVQKILNITGCLVIKSTFNRPNLYYKILE 180
Query: 293 KSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDIN 352
K + + + + K ++ Y ESGI+Y S K+ E++A+ L++R + YHA++
Sbjct: 181 KPTSQEDCLTILEKLLKYRY-RGESGIIYTNSIKDSEEIAEGLKKRNLKIACYHANLSAE 239
Query: 353 AREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLP 412
R KVH+RW + LQ IV TVAFGMGI+KPDVRFVIHH++SKS+E YYQESGRAGRDGL
Sbjct: 240 IRSKVHIRWHEKSLQAIVATVAFGMGIDKPDVRFVIHHTISKSMENYYQESGRAGRDGLR 299
Query: 413 SECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRY 447
+EC+ +R DV + S+MVF L +LY +V+Y
Sbjct: 300 AECVTLYRMQDVFKVSTMVFSSVGSLDHLYGMVKY 334
>gi|320167845|gb|EFW44744.1| DEAD/DEAH box helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1784
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/360 (50%), Positives = 248/360 (68%), Gaps = 5/360 (1%)
Query: 73 FEWDSRADDVRLNVFGI-PAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ W VFG+ +R +Q E+IN +SGR LV+M GGGKSLCYQ PAV+ +
Sbjct: 817 YPWSGDVQKAMRKVFGLNKGFRTHQLEVINCTMSGRHCLVLMPTGGGKSLCYQNPAVISK 876
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPLLSLIQDQV L L I A L+ + ++ ++ +Y L + + K++Y+TP
Sbjct: 877 GVTIVVSPLLSLIQDQVEALVQLNIGAVFLSGSQTEAEQSRVYLELSRQDERCKVVYMTP 936
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
EKIS S R +S+L+ + + RL+ IDEAHC SQWGHDFRPDYK L +L +FP VP+M
Sbjct: 937 EKISHSTRLLSQLDMLYQSKRLARFVIDEAHCVSQWGHDFRPDYKQLRMLHDRFPTVPVM 996
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATAT++V++D+M+ L+I + FV + NR NL Y V +K K +D+IA+ I++
Sbjct: 997 ALTATATERVRSDIMKQLNIHQAEIFVQSFNRENLRYQVYKKD---KTTLDDIARMIKKQ 1053
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+P +SGIVYC SRK+CE VA+EL QRGI+A +YHA MD R V W N+ QVIV
Sbjct: 1054 WPK-DSGIVYCLSRKDCETVARELVQRGIAATFYHAGMDPGDRAVVQRDWIGNRKQVIVA 1112
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
T+AFGMGINKPDVR+V H+SL KS+E YYQESGRAGRDG + C++++ D + SM+
Sbjct: 1113 TIAFGMGINKPDVRYVFHYSLPKSLEGYYQESGRAGRDGYEAHCIMYYSYGDKSKMESMI 1172
>gi|134111480|ref|XP_775656.1| hypothetical protein CNBD6100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258318|gb|EAL21009.1| hypothetical protein CNBD6100 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 893
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/424 (45%), Positives = 270/424 (63%), Gaps = 24/424 (5%)
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+++ ++ S F + S N F + +R Q+ +INA + RD++ +M GGGKS
Sbjct: 114 TAANTIDYQSSCFPFSSAIAATLRNTFNLNKFRLCQEGVINAAVDDRDIVCVMPTGGGKS 173
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
L YQLPAV+ G+ +VVSPLL+LI DQV L +GI MLT +TS +++ IYK L G
Sbjct: 174 LTYQLPAVMGRGLTVVVSPLLALIWDQVRALKEIGIECVMLTGSTSTQEQNEIYKRLRDG 233
Query: 181 ----EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236
E E+++ YVTPEK+SKSKRFMS LEK + +GRL IDEAHCCSQ GHDFRPDYK
Sbjct: 234 PSHGEKEIRLCYVTPEKVSKSKRFMSVLEKMNQSGRLRRFVIDEAHCCSQLGHDFRPDYK 293
Query: 237 NLGILKTQFPDVPMMALTATATQKVQNDLMEMLHI-----------RKCIKFVSTINRPN 285
L +LKT FP VP+ A+TAT + K DL+++L + + F S + RPN
Sbjct: 294 KLSMLKTLFPRVPIQAVTATLSSKTLPDLLKILRLGPITDGRSSKTTGTVFFSSPLFRPN 353
Query: 286 LFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELR---QRGISA 342
L Y V K+S K I E+ ++IQ+ +P ESGIVYC S+K+ E VA+EL+ I
Sbjct: 354 LHYKVLPKASNAKTAIAEMGRWIQDKHPG-ESGIVYCLSKKDAETVAEELKGWSNGSIKT 412
Query: 343 DYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQE 402
YHA +D +E +H++W + K+ I T+AFG+GI+K DVR+VIHHS+SKS+E YYQE
Sbjct: 413 GVYHAGIDDTEKETIHVKWREGKINCICATIAFGLGIDKGDVRYVIHHSMSKSLEGYYQE 472
Query: 403 SGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLV 462
+GRAGRDG S+C+LF+R D R + +++ + G L++++R++Q ++ R V
Sbjct: 473 TGRAGRDGKDSDCVLFYRGQDATRLAGLIYTDVDGTGKLHEMLRFAQ-----DLRTCRKV 527
Query: 463 IFEK 466
F K
Sbjct: 528 AFAK 531
>gi|223998386|ref|XP_002288866.1| probable atp-dependent DNA helicase Q5 [Thalassiosira pseudonana
CCMP1335]
gi|220975974|gb|EED94302.1| probable atp-dependent DNA helicase Q5 [Thalassiosira pseudonana
CCMP1335]
Length = 515
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/496 (40%), Positives = 302/496 (60%), Gaps = 34/496 (6%)
Query: 70 SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
S + W R N F I +R +Q +IIN+ LSG DV V+M GGGKSL YQLPAVL
Sbjct: 1 SSKYPWQDRMMHHLRNTFHITNFRDHQHDIINSTLSGHDVFVVMRTGGGKSLTYQLPAVL 60
Query: 130 -----REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTT---SKEDEKFIYKALEKGE 181
+ + +V+SPL+SLI+DQ + + +P L+ T+ S E + ++ E
Sbjct: 61 EAESDKRKVTVVISPLISLIRDQEEQMNEM-LPGSALSFTSGLGSAEHNRRWGLVRDRNE 119
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
G + +++VTPEK+ KS RF ++EK + GRL IDE HC QWGHDFRPDY LGI
Sbjct: 120 G-VALIFVTPEKVGKSGRFKGEMEKLNEQGRLGRFVIDECHCACQWGHDFRPDYTKLGIF 178
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFV-STINRPNLFYMVREKSSVGKVV 300
K FP VP++A+TATA+ +V++D +++L + K +F ST NRPNL Y V+ K +
Sbjct: 179 KHHFPSVPVLAVTATASDRVRDDCIQILRLGKNYRFFRSTANRPNLTYSVKTKPDGKDAI 238
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
++++ +I+ ++ N ++GI+Y FSRKE + VA +L +GI A YH+D+ ++ +H
Sbjct: 239 VNDMVDFIKTNHSN-QAGIIYTFSRKEADNVADQLCDKGIIARAYHSDVADARKDNIHRS 297
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W +N+ QV+V T+AFG+GINKPDVRFV+HHS+SKS+E YYQESGRAGRDG P++C+L++
Sbjct: 298 WMRNETQVVVATIAFGLGINKPDVRFVLHHSISKSLEAYYQESGRAGRDGQPADCVLYYS 357
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF-------------EKL 467
P DVP+ M+ E +G + +VRY Q H + RL I E+L
Sbjct: 358 PKDVPKMLGMIHGE-AGEPTFWHMVRYGQ--AHGDDSLCRLAILNILGEADTSQAGMERL 414
Query: 468 QQVNLFCMVV----LAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKE--IDSDLKR 521
+++ C + H Q + ++ + + T++QLV K K LK+ +L +
Sbjct: 415 ERLADQCATTKRRNVGSHCQTVTQVVNTLNMLGEDCTLIQLVAKCKCFLKDNPPAKELNK 474
Query: 522 EEIEQLVLQLIIDRVL 537
EE E++++ +I++ VL
Sbjct: 475 EECERIIVSMIVEEVL 490
>gi|255579679|ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative [Ricinus communis]
Length = 1233
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/364 (50%), Positives = 250/364 (68%), Gaps = 5/364 (1%)
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS T F W ++ + VFG ++R NQ+E+INA +SG DV V+M GGGKSL YQLPA
Sbjct: 436 WSSTNFPWTTKLEAYNKKVFGNHSFRPNQREVINATMSGFDVFVLMPTGGGKSLTYQLPA 495
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ GI LV+SPL+SLIQDQ+M L I A L++ +++ I + L + K+L
Sbjct: 496 LVCPGITLVISPLVSLIQDQIMHLLQANISAAYLSANMEWAEQQEILRELSSDYCKYKLL 555
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KS + LE + G L+ I IDEAHC SQWGHDFRPDYK LGILK +F
Sbjct: 556 YVTPEKVAKSDVLLRNLESLNARGLLARIVIDEAHCVSQWGHDFRPDYKELGILKKKFEK 615
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P++ALTATAT V+ D+++ L + CI F + NRPNL+Y V K+ K +D+I K+
Sbjct: 616 TPVLALTATATASVKEDVVQALGLVDCIIFRQSFNRPNLWYSVVPKT---KKCLDDIDKF 672
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GI+YC SR +CE+VA++L++ G A +YH +MD R V +WSK+++
Sbjct: 673 IKENHFD-ECGIIYCLSRMDCEKVAEKLQECGHKAAFYHGNMDAAQRAFVQKQWSKDEIN 731
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDGL S C+L++ +D R
Sbjct: 732 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYSDYIRV 791
Query: 428 SSMV 431
M+
Sbjct: 792 KHMI 795
>gi|393911114|gb|EJD76172.1| ATP-dependent DNA helicase [Loa loa]
Length = 564
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/557 (39%), Positives = 331/557 (59%), Gaps = 39/557 (7%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME ++ +ELE +E ++ ++++ + L++R+ Q+ +R ++
Sbjct: 13 MELSKLDEELERIEGDISSLRKRKRALLERKAQIEKR-----------------IVERNV 55
Query: 61 SSSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
+ ++ W S F+W V NVF + +R Q+ +INAVLS D LV+M+ G GK
Sbjct: 56 ENESSFRIWDSDDFQWMKECLHVLHNVFKLSDFRPLQRAVINAVLSKEDCLVVMSTGSGK 115
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SLCYQLPAV+ +GI LVVSPL++LI+DQ+ L LGI A L +T+KE+ + AL
Sbjct: 116 SLCYQLPAVIMKGIVLVVSPLIALIEDQLHQLRKLGIDAATLNQSTAKEEISRVQTALTD 175
Query: 180 GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
+ L++LYVTPEK++KSKR M++LEKC+ RL L+ A F +L
Sbjct: 176 SKAPLRLLYVTPEKLAKSKRIMNRLEKCNEMKRLKLMKYTAA---LNGDMIFGQILNSLI 232
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
+LK QF VP++ LTATAT V +D+ ML I + F + NRPNL Y V +K S
Sbjct: 233 VLKRQFQAVPLIGLTATATADVIDDVKNMLGIPAAVVFRAGFNRPNLHYSVCQKPSSDVE 292
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHM 359
+D + + I+ + SGI+YCFSRKECE++ + LR +G+ A +YHA +D + R H
Sbjct: 293 FVDILVELIKTRFAEL-SGIIYCFSRKECEELTKSLRAKGVKASHYHAFLDADKRNITHE 351
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+W + VIV T+AFGMGI+KPDVR+VIHHSL KS+E YYQESGR GRDG + C+LF+
Sbjct: 352 KWLNGGINVIVATIAFGMGIDKPDVRYVIHHSLPKSLENYYQESGRVGRDGNKAYCILFY 411
Query: 420 RPADVPRQSSMVFYENSGLQNLYDIVRY---------SQYPLHWNIE---KVRLVIFEKL 467
R D+ RQS+MV E +G++NLY ++ Y S H+N+E + + +
Sbjct: 412 RLNDLFRQSTMVCTEKTGVRNLYSVLSYCIQTSQCRRSVIAEHFNVEWNSSLCSKMCDIC 471
Query: 468 QQVNLFCMVVLAGHAQCIISLLQDIQ-DNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQ 526
Q N F V + + + ++ +L+++Q +N R+T ++LV+ + K+++S + RE IE
Sbjct: 472 SQTNDFECVDVTDYWRLMLEVLKNVQKTDNNRVTGMKLVE---LTWKKVNS-VSRELIEL 527
Query: 527 LVLQLIIDRVLVRIGPF 543
LV + I+D L R P
Sbjct: 528 LVAKFILDGYLKRRFPL 544
>gi|281204428|gb|EFA78623.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 1358
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/378 (47%), Positives = 256/378 (67%), Gaps = 4/378 (1%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
W F W + + N+FG ++R NQ+EIINA ++G D+ V+M GGGKSLCYQ+PA+
Sbjct: 666 WKAKFPWSEKINSTNRNIFGNRSFRLNQEEIINASMAGHDIFVLMPTGGGKSLCYQIPAL 725
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
L +G+ +++SPL+SLIQDQVM L L P LT + S E++ I+K L +K+LY
Sbjct: 726 LADGLTIIISPLISLIQDQVMLLQNLSYPTAALTGSISSEEQTRIFKELRSDNPTIKLLY 785
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPEK+ +S +S + + G+L IDEAHC SQWGHDFRPDYK L ILK +FP +
Sbjct: 786 LTPEKVVQSTSIISLFHQLNSRGKLIRAVIDEAHCVSQWGHDFRPDYKQLAILKREFPKL 845
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P++ALTATAT++V+ D++ L ++ I F + NRPNL Y V +K K +ID+I ++I
Sbjct: 846 PILALTATATERVKQDVIFNLSMKDSITFKQSFNRPNLIYAVVKKK---KSIIDDIIEFI 902
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ +SGI+YCFS ECE+VAQEL +G+ +YHA M R++ W+++++++
Sbjct: 903 TANGYKQKSGIIYCFSTFECEKVAQELNSKGLKVKFYHAKMTPEDRQRTQENWTRDRVKI 962
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
IV T+AFGMGINKPDVRFVIHHSL KS+E YYQESGRAGRD + C+L++ AD R
Sbjct: 963 IVSTIAFGMGINKPDVRFVIHHSLPKSLEGYYQESGRAGRDSQTAHCILYYSYADKYRID 1022
Query: 429 SMVFYENSGLQNLYDIVR 446
S++ +SG + Y +R
Sbjct: 1023 SLL-ESSSGQGSTYQSIR 1039
>gi|297739574|emb|CBI29756.3| unnamed protein product [Vitis vinifera]
Length = 1235
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/364 (50%), Positives = 248/364 (68%), Gaps = 7/364 (1%)
Query: 69 WS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS G F W + + VFG ++R NQ+E+INA +SG DV V+M GGGKSL YQLPA
Sbjct: 415 WSSGNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPA 474
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ GI LV+SPL+SLIQDQ+M L IPA L+++ +++ I + L + K+L
Sbjct: 475 LISPGITLVISPLVSLIQDQIMHLLQANIPAAYLSASMEWNEQQEILREL--SSCKYKLL 532
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
Y TPEK++KS M L+ H LS I IDEAHC SQWGHDFRPDY+ LGILK +FP+
Sbjct: 533 YATPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 592
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P++ALTATAT V+ D+++ L + CI F + NRPNL+Y V K+ + +D+I K+
Sbjct: 593 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVLPKT---RKCLDDIDKF 649
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GI+YC SR +CE+VA+ L++ G A +YH MD R V +WSK+++
Sbjct: 650 IRENHFD-ECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSMDPARRAFVQKQWSKDEIN 708
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ +D R
Sbjct: 709 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRV 768
Query: 428 SSMV 431
M+
Sbjct: 769 KHMI 772
>gi|225448193|ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
vinifera]
Length = 1224
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/364 (50%), Positives = 248/364 (68%), Gaps = 7/364 (1%)
Query: 69 WS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS G F W + + VFG ++R NQ+E+INA +SG DV V+M GGGKSL YQLPA
Sbjct: 404 WSSGNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPA 463
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ GI LV+SPL+SLIQDQ+M L IPA L+++ +++ I + L + K+L
Sbjct: 464 LISPGITLVISPLVSLIQDQIMHLLQANIPAAYLSASMEWNEQQEILRELS--SCKYKLL 521
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
Y TPEK++KS M L+ H LS I IDEAHC SQWGHDFRPDY+ LGILK +FP+
Sbjct: 522 YATPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 581
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P++ALTATAT V+ D+++ L + CI F + NRPNL+Y V K+ + +D+I K+
Sbjct: 582 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVLPKT---RKCLDDIDKF 638
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GI+YC SR +CE+VA+ L++ G A +YH MD R V +WSK+++
Sbjct: 639 IRENHFD-ECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSMDPARRAFVQKQWSKDEIN 697
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ +D R
Sbjct: 698 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRV 757
Query: 428 SSMV 431
M+
Sbjct: 758 KHMI 761
>gi|301116896|ref|XP_002906176.1| ATP-dependent helicase, RECQ family protein [Phytophthora infestans
T30-4]
gi|262107525|gb|EEY65577.1| ATP-dependent helicase, RECQ family protein [Phytophthora infestans
T30-4]
Length = 513
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/453 (43%), Positives = 288/453 (63%), Gaps = 33/453 (7%)
Query: 113 MAAGGGKSLCYQLPAVL--REGIALVVSPLLSLIQDQVMC---LAALGIPAHMLTSTTSK 167
M +GGGKSLCYQLPA+L G +V+SPL+SLIQDQ + +A G A L++ S+
Sbjct: 1 MRSGGGKSLCYQLPALLDGNSGFTVVISPLISLIQDQALLFNDIAGRG-SARQLSAEQSR 59
Query: 168 EDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQW 227
+ IYK+L + LK+L VTPEK+ KSK MS+LEK + GRL IDEAHCCSQW
Sbjct: 60 GEAAAIYKSLLDSDSTLKILLVTPEKLIKSKLLMSRLEKAYQTGRLKRFVIDEAHCCSQW 119
Query: 228 GHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLF 287
GHDFR DY LGI+K Q+P VP++ALTATAT ++ D+ +L I++C+ F ++ R NL
Sbjct: 120 GHDFRSDYAKLGIIKRQYPKVPILALTATATPRLAKDVKTILEIQQCVSFRTSFLRSNLH 179
Query: 288 YMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHA 347
Y V+EK + +D + + ++ S+ +S++GIVYC +RKE EQVAQ L Q I A YHA
Sbjct: 180 YEVKEKPAKDAAAMDCLVRLVK-SFSSSDTGIVYCLTRKETEQVAQHLHQANIRAACYHA 238
Query: 348 DMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAG 407
+ +E++HM W +NKLQV+V T+AFG+GINKPDVRFVIH +LSKS+E YYQESGRAG
Sbjct: 239 --HVEKKEEIHMAWIRNKLQVVVATIAFGLGINKPDVRFVIHFTLSKSIEGYYQESGRAG 296
Query: 408 RDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKL 467
RDG P+ C+L ++P+DVPR ++V E G+ ++ +++Y L + F +
Sbjct: 297 RDGKPARCVLMYKPSDVPRVCNIVQAEVGGILSMRSMIKYC-VELSQCRQSTMAAYFGEA 355
Query: 468 QQVNLFC---------------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIK- 511
+ + C + L+ H++ ++S+ +D + +RLT+ QL+D+ + +
Sbjct: 356 FESDAICGGGCDNCKRDIDTEDRIDLSEHSKALLSITEDAKKIERRLTLKQLIDEFRSRK 415
Query: 512 ----LKEIDSDLK---REEIEQLVLQLIIDRVL 537
+D +K R E + LV++L++ VL
Sbjct: 416 FAQEWTNLDPSIKSMSRGECDTLVVKLLLSNVL 448
>gi|222628902|gb|EEE61034.1| hypothetical protein OsJ_14872 [Oryza sativa Japonica Group]
Length = 2486
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/369 (50%), Positives = 245/369 (66%), Gaps = 10/369 (2%)
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS T F W + VFG ++R NQ+EIINA +SG DV V+M GGGKSL YQLPA
Sbjct: 1721 WSSTHFAWTKELEANNKRVFGNRSFRPNQREIINATMSGNDVFVLMPTGGGKSLTYQLPA 1780
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ G+ LVVSPL+SLIQDQ+M L I A L+++ +++ I + L K+L
Sbjct: 1781 LICNGVTLVVSPLVSLIQDQIMHLLQANISAAYLSASMEWSEQQEILRELMSPTCTYKLL 1840
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDY-----KNLGILK 242
YVTPEKI+KS + +LE + G LS I IDEAHC SQWGHDFRPDY ++LGILK
Sbjct: 1841 YVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGHDFRPDYQFFIHQHLGILK 1900
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
+FP P++ALTATAT V+ D++++L + CI F + NRPNL Y V K+ K ++
Sbjct: 1901 QKFPQTPVLALTATATASVKEDVVQVLGLANCIIFRQSFNRPNLRYFVWPKT---KKCLE 1957
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWS 362
+I +I ++ N E GI+YC SR +CE+VA +LR+ G +A +YH MD R + +WS
Sbjct: 1958 DIHNFIHANH-NKECGIIYCLSRMDCEKVAAKLREYGHTASHYHGSMDPEDRANIQKQWS 2016
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
K+++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRD S C+LF+ +
Sbjct: 2017 KDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDSQLSTCVLFYNYS 2076
Query: 423 DVPRQSSMV 431
D R MV
Sbjct: 2077 DYIRLKHMV 2085
>gi|388858117|emb|CCF48354.1| related to RecQ family helicase RecQL1 [Ustilago hordei]
Length = 782
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/487 (41%), Positives = 290/487 (59%), Gaps = 49/487 (10%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVDRQDQLY-ERQSELKSLLEAFEA-SRGSPIQYGGS 61
E++ +LE ++ EV VQ QI +L QD L ER+ L + +RGS + G
Sbjct: 39 EQVAAKLEELDTEVDSVQSQIAELQKLQDSLLRERRKVYTDYLNTIQGDTRGSKRRLG-- 96
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
V+ + +F W +++FGIP++R QQ +INA L GR+ +V+M GGGKSL
Sbjct: 97 ----VDYTTKSFSWSDHVRLAAMSLFGIPSFRFCQQAVINAALDGRNAVVVMPTGGGKSL 152
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL---- 177
CYQLPA+L G+ LVVSPL+SL+ DQV+ L +GI + +L ++TS+E+ I K +
Sbjct: 153 CYQLPAILTPGVTLVVSPLISLMTDQVLHLQEVGIKSELLCASTSREETNAILKQIRTDT 212
Query: 178 ---------------------EKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLI 216
+ +G +K+LYVTPE+I+KSK +S L+ + GRLS I
Sbjct: 213 TTDPRTTFASSSKSQDSNWNQHQADG-IKLLYVTPERIAKSKPCLSALQSAYEQGRLSRI 271
Query: 217 SIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHI----- 271
IDEAHCCSQ GHD+RPDY L +L+ FP VP+M LTAT KV +++E++ +
Sbjct: 272 VIDEAHCCSQMGHDYRPDYAKLSLLRRLFPKVPIMCLTATCGPKVLKEILEIIDLPAITE 331
Query: 272 ------RKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ I F++ + RPNL Y V ++ K + I YI E + ESGIVYC SR
Sbjct: 332 PDNAAPMRTIYFIAPLFRPNLKYQVVQRPKEAKAASEAIVDYILEHHAG-ESGIVYCLSR 390
Query: 326 KECEQVAQ---ELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
+ E A+ E+ I+ +YHA +D +++ +H W ++QV+ T+AFGMGI+KP
Sbjct: 391 PDTEATAKALTEISNGRIATGHYHAGLDDASKQLIHTHWRTGQIQVVCATIAFGMGIDKP 450
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLY 442
+VRFVIH +SKS++ YYQE+GRAGRDG S+C+LF+RP D R SS V E +G + L
Sbjct: 451 NVRFVIHACISKSLDGYYQETGRAGRDGQDSDCVLFYRPQDCVRVSSFVASEPTGQEKLS 510
Query: 443 DIVRYSQ 449
++ Y+Q
Sbjct: 511 AMLEYAQ 517
>gi|449457093|ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
gi|449511185|ref|XP_004163888.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
Length = 1269
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 247/364 (67%), Gaps = 5/364 (1%)
Query: 69 WSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS F W + VFG ++R NQ+E+INA +SG DV V+M GGGKSL YQLPA
Sbjct: 494 WSSRNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPA 553
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ G+ LV+SPL+SLIQDQ+M L I A L++ +++ I++ L + K+L
Sbjct: 554 LICPGVTLVISPLVSLIQDQIMHLIQANISAAYLSANMEWSEQQEIFRDLSSDCSKYKLL 613
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KS + LE + L+ I IDEAHC SQWGHDFRPDY+ LGILK +FP
Sbjct: 614 YVTPEKVAKSDVLLRHLESLNARHLLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPK 673
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
+P++ALTATAT V+ D+++ L + CI F + NRPNL+Y V K+ K +D+I K+
Sbjct: 674 IPVLALTATATASVKEDVVQALGLINCIIFRQSFNRPNLWYSVIPKT---KKCVDDIDKF 730
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GIVYC SR +CE+VA+ L++ G A +YH MD R + +WSK+++
Sbjct: 731 IKENHFD-ECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDPAQRSFIQKQWSKDEIN 789
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDGL S C+L++ +D R
Sbjct: 790 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYSDYIRV 849
Query: 428 SSMV 431
M+
Sbjct: 850 KHMI 853
>gi|357167600|ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Brachypodium
distachyon]
Length = 1126
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 247/366 (67%), Gaps = 7/366 (1%)
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS F W + VFG ++R NQ+EIINA + G DV V+M GGGKSL YQLPA
Sbjct: 344 WSSKDFPWTKELEAHNKRVFGNHSFRPNQREIINATMYGSDVFVLMPTGGGKSLTYQLPA 403
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--EKGEGELK 185
++ EGI LVV PL+SLIQDQ+M LA IPA L++ +++ I + L K
Sbjct: 404 LIDEGITLVVCPLVSLIQDQIMHLAQANIPAICLSANVEWTEQQRILRDLMSPSSTCTYK 463
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPEKI+KS + +LE + G LS I IDEAHC SQWGHDFRPDY++LG+LK +F
Sbjct: 464 LLYVTPEKIAKSDALLRQLEILYSRGHLSRIVIDEAHCVSQWGHDFRPDYQHLGLLKQKF 523
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P+ P++ALTATAT V+ D+++ L + C+ F + NRPNL Y+V K+ K +++I
Sbjct: 524 PETPVLALTATATASVKEDVVQALGLANCVVFRQSFNRPNLRYIVMPKT---KKCLEDID 580
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
+I+ S+ + E GI+YC SR +CE+VA +LR+ G A +YH MD R ++ +WS++K
Sbjct: 581 NFIRASH-HKECGIIYCLSRMDCEKVAAKLREYGHKASHYHGSMDPLDRTEIQRQWSRDK 639
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
+ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ +D
Sbjct: 640 INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYSDYI 699
Query: 426 RQSSMV 431
R M+
Sbjct: 700 RVKHMI 705
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 553 EISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISAR 612
E S+ Q N ++S SS L L LR ++A + G H + ++ ++ IS+R
Sbjct: 906 ESSTPQINKTAQRQSEVDENISSLLFETLKCLRSQIAESTAGCGVHHIFKNETLKEISSR 965
Query: 613 KPSTMEEASSNHLE-KIIGKLKTGKYGSRILEVI 645
P T EE LE IGK+K KYG +L I
Sbjct: 966 VPRTKEEL----LEINGIGKVKLNKYGDSVLATI 995
>gi|195054415|ref|XP_001994120.1| GH17364 [Drosophila grimshawi]
gi|193895990|gb|EDV94856.1| GH17364 [Drosophila grimshawi]
Length = 1404
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/409 (47%), Positives = 260/409 (63%), Gaps = 21/409 (5%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
FE +R FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG
Sbjct: 625 FEHSTRLMQALSFSFGLKSFRPNQLQVINAALLGNDCFVLMPTGGGKSLCYQLPAILTEG 684
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
+ +V+SPL SLI DQV LA+L I A ++ S ED IY+ LE +K+LYVTPE
Sbjct: 685 VTIVISPLKSLIFDQVSKLASLDICAKSMSGEQSMEDTMAIYRDLEGHSPLVKLLYVTPE 744
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
KIS S RF L+ +S IDEAHC SQWGHDFRPDYK LGIL+ +FP+VP MA
Sbjct: 745 KISSSARFQDTLDHLSANNFISRFVIDEAHCVSQWGHDFRPDYKKLGILRKRFPNVPTMA 804
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTATAT +V+ D+++ L++ C F+S+ NR NL + V K G +DE+ +IQ +
Sbjct: 805 LTATATPRVRQDILQQLNLTHCKWFLSSFNRSNLRFQVLPKK--GASTLDEMRSFIQ-TR 861
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
P + SGI+YC SRKEC++VA ++ GI A YHA + ARE W NK++VI T
Sbjct: 862 PITASGIIYCLSRKECDEVAHKMSAAGIRAVAYHAGLTDTARESRQKDWITNKVRVICAT 921
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
+AFGMGI+KPDVRFV+H+SL KS+E YYQE+GRAGRDG ++C+L++ +D+ R M+
Sbjct: 922 IAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEIADCILYYNYSDMMRLKKMMD 981
Query: 433 YENS--------GLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF 473
+ + + NL+ IV Y + NI R + QQ++ F
Sbjct: 982 ADRALEYHVKKIHIDNLHRIVGYCE-----NITDCR-----RAQQLDYF 1020
>gi|218194880|gb|EEC77307.1| hypothetical protein OsI_15961 [Oryza sativa Indica Group]
Length = 2505
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/369 (50%), Positives = 244/369 (66%), Gaps = 10/369 (2%)
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS T F W + VFG ++R NQ+EIINA +SG DV V+M GGGKSL YQLPA
Sbjct: 1740 WSSTHFAWTKELEANNKRVFGNRSFRPNQREIINATMSGNDVFVLMPTGGGKSLTYQLPA 1799
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ G+ LVVSPL+SLIQDQ+M L I A L+++ +++ I + L K+L
Sbjct: 1800 LICNGVTLVVSPLVSLIQDQIMHLLQANISAAYLSASMEWSEQQEILRELMSPTCTYKLL 1859
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDY-----KNLGILK 242
YVTPEKI+KS + +LE + G LS I IDEAHC SQWGHDFRPDY ++LGILK
Sbjct: 1860 YVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGHDFRPDYQFFIHQHLGILK 1919
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
+FP P++ALTATAT V+ D++++L + CI F + NRPNL Y V K+ K ++
Sbjct: 1920 QKFPQTPVLALTATATASVKEDVVQVLGLANCIIFRQSFNRPNLRYFVWPKT---KKCLE 1976
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWS 362
+I +I ++ N E GI+YC SR +CE+VA +LR+ G A +YH MD R + +WS
Sbjct: 1977 DIHNFIHANH-NKECGIIYCLSRMDCEKVAAKLREYGHKASHYHGSMDPEDRANIQKQWS 2035
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
K+++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRD S C+LF+ +
Sbjct: 2036 KDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDSQLSSCVLFYNYS 2095
Query: 423 DVPRQSSMV 431
D R MV
Sbjct: 2096 DYIRLKHMV 2104
>gi|443900420|dbj|GAC77746.1| ATP-dependent DNA helicase [Pseudozyma antarctica T-34]
Length = 800
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 285/487 (58%), Gaps = 48/487 (9%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVD-RQDQLYERQSELKSLLE-AFEASRGSPIQYGGS 61
E ++ +LE ++AE+ V QI L +Q L ER+ LE A + +P + G
Sbjct: 40 ETVVTKLEELDAEIESVSGQIADLQQLKQSLLRERRKVHAEYLESAKQDGTQAPRKLGHD 99
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
+++ NWS T ++ +VF IP++R Q+ +INA + R +V+M GGGKSL
Sbjct: 100 YTSSSANWSSTIRSTAK------SVFRIPSFRFCQEAVINAAMDARHAVVVMPTGGGKSL 153
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
CYQLPA+L G+ LVVSPL+SL+ DQV+ L +GI + +L +TS+ED I K + G
Sbjct: 154 CYQLPAILNPGVTLVVSPLISLMTDQVLHLKEVGIESELLCGSTSREDSTAILKKIRHGP 213
Query: 182 G-------------------------ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLI 216
+K+LYVTPE+I+KSK F+S L+ + GRLS I
Sbjct: 214 ALAGPSKHANSNASASSELLEDHRTDGIKLLYVTPERIAKSKTFLSALQNAYEQGRLSRI 273
Query: 217 SIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIR---- 272
IDEAHCCSQ GHD+RPDY L +L+ FP VP+M LTAT KV +++E++ +
Sbjct: 274 VIDEAHCCSQMGHDYRPDYAKLSLLRRLFPKVPVMCLTATCGPKVLKEIIEIIDLPPITQ 333
Query: 273 -------KCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ I F + + RPNL Y V ++ + I YI + GIVYC S+
Sbjct: 334 PDNAAPMRTIYFTAPLFRPNLLYRVVQRPQQAQAASQAIVDYILAHHAG-HCGIVYCLSQ 392
Query: 326 KECEQVAQ---ELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
+ E +A+ EL R I+ YHA +D +++++H W K ++QV+ T+AFGMGI+KP
Sbjct: 393 SDTEAMAKALMELSSRRIATGTYHAGLDDASKQRIHTDWRKGRIQVVCATIAFGMGIDKP 452
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLY 442
DVRFVIH +SKS++ YYQE+GRAGRDG S+CLLF+RP D R SS+V E +G + L
Sbjct: 453 DVRFVIHACISKSLDAYYQETGRAGRDGKTSDCLLFYRPQDAIRMSSLVASEPTGQEKLS 512
Query: 443 DIVRYSQ 449
++ Y+Q
Sbjct: 513 AMLEYAQ 519
>gi|391342341|ref|XP_003745479.1| PREDICTED: putative ATP-dependent DNA helicase Q1-like [Metaseiulus
occidentalis]
Length = 611
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/515 (40%), Positives = 303/515 (58%), Gaps = 61/515 (11%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W + + F IPA+R +Q+ IN +LSG+D +VIM GKSL YQL + +G
Sbjct: 66 FPWSGPIRSIIADTFKIPAFRGSQEAAINCILSGKDCIVIMPTAAGKSLIYQLSSFYLQG 125
Query: 133 IALVVSPLLSLIQDQVMCLAAL--GIPAHMLTSTTSKEDEKFIYK-ALEKGEGELKML-Y 188
+ LVV+PL+SL++DQV ++ +P L S ++E K L E+ +L Y
Sbjct: 126 LTLVVTPLISLMEDQVTQVSVRYPALPVGSLHSQLTREQTSATLKRMLFPSPAEVTLLLY 185
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE+++KSK FM+KL+KC +L LI+IDE HCCSQWGHDFRPDY LGILK QFP V
Sbjct: 186 VTPERLAKSKLFMTKLQKCWEMKKLKLIAIDEVHCCSQWGHDFRPDYNYLGILKKQFPGV 245
Query: 249 PMMALTATATQKVQNDLMEMLHI-RKCIKFVSTINRPNLFYMVREKS-----SVGKVVID 302
P++ LTATA+Q + +D++ ML++ + + + +RPNL Y V+ + ++G ++ +
Sbjct: 246 PLIGLTATASQSITSDVISMLNLDQDVVVLRDSFDRPNLRYSVKNDTDDITAAIGNLIRN 305
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRW 361
E A +SGI+YCFS +E EQVA+ L GISAD YHA+++ R +VH +W
Sbjct: 306 EYA---------GQSGIIYCFSIREAEQVARCLVSDFGISADAYHANLEAERRSRVHRKW 356
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
S +QV+V T+AFGMGI+K DVRFVIH+S+ KS+E YYQESGRAGRDG P++C++FF+
Sbjct: 357 STGSIQVVVATIAFGMGIDKGDVRFVIHYSIPKSLENYYQESGRAGRDGEPADCIVFFKF 416
Query: 422 ADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVI------------------ 463
D+ RQSSMV E +G++NLY++V Y +H RL++
Sbjct: 417 QDIFRQSSMVLSEKAGVRNLYNVVNYCLDTIHCR----RLLLAKYFCDGTSFSGTSCGQT 472
Query: 464 ---------FEKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKE 514
++ + +++ VVL A +++ Q RLT +LVD ++ K K
Sbjct: 473 EQRCDNCSRVKQTRTIDISRYVVLMSEA------IEEAQTTGVRLTGNKLVDVLRKKTKS 526
Query: 515 IDSDLKREEIEQLVLQLIIDRVLVRIGPFSPGKKI 549
L + + EQLV + L F+P I
Sbjct: 527 ----LPKAQFEQLVAWCLCQGFLEEKYHFTPYSTI 557
>gi|71021179|ref|XP_760820.1| hypothetical protein UM04673.1 [Ustilago maydis 521]
gi|46100194|gb|EAK85427.1| hypothetical protein UM04673.1 [Ustilago maydis 521]
Length = 748
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/482 (41%), Positives = 286/482 (59%), Gaps = 45/482 (9%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVDRQDQLY-ERQSELKSLLEAFEASRGSPIQYGGSS 62
E + +LE ++AE VQ QI +L +D + ER+ + L+ + + + G
Sbjct: 43 ETVAAKLEELDAEAESVQRQIAELQRLKDAVVRERRKVYNAYLKTLQLENSASDRKLGLD 102
Query: 63 STAVENWSGTFEWDSRADDVRL---NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
T +F W +DDVRL +VFGIP++R Q +INA L GR+ +V+M GGGK
Sbjct: 103 YTTT-----SFSW---SDDVRLAALSVFGIPSFRFCQLGVINAALDGRNAVVVMPTGGGK 154
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SLCYQLPA+LR G+ LVVSPL+SL+ DQV+ L +GI + +L STT +E I K +
Sbjct: 155 SLCYQLPAILRRGVTLVVSPLISLMTDQVLHLQQVGIQSELLCSTTPRERSNAILKQIRL 214
Query: 180 GEGE------------------LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEA 221
G +K+LYVTPE+I+KSK +S L+ + RLS I IDEA
Sbjct: 215 GTTSEIEQATCSSGWNYHQNDGIKLLYVTPERIAKSKTCLSALQSAYEQARLSRIVIDEA 274
Query: 222 HCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHI---------- 271
HCCSQ GHD+RPDY L +L+ FP VP+M LTAT KV N+++E++ +
Sbjct: 275 HCCSQMGHDYRPDYAKLSLLRRLFPKVPIMCLTATCGPKVLNEILEIIDLEPITEPDNAA 334
Query: 272 -RKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQ 330
++ I F + + RPNL Y V ++ K + I YI +++ SGIVYC S+ + +
Sbjct: 335 PKRTIYFTAPLFRPNLAYKVVQRPQQTKAAAEAIVDYILQNHAG-HSGIVYCLSQADTQA 393
Query: 331 VAQ---ELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFV 387
A+ EL I+ YHA +D ++ +H W ++QV+ T+AFGMGI+KPDVRFV
Sbjct: 394 TAKALSELSSGRIATGCYHAGLDDASKHMIHTDWRTGRIQVVCATIAFGMGIDKPDVRFV 453
Query: 388 IHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRY 447
IH +SKS++ YYQE+GRAGRDG S+C+LF+RP D R SS+V E +G + L ++ Y
Sbjct: 454 IHACISKSIDGYYQETGRAGRDGQDSDCVLFYRPQDAIRMSSLVAGEPTGREKLAAMLEY 513
Query: 448 SQ 449
+Q
Sbjct: 514 AQ 515
>gi|30681987|ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
gi|75329797|sp|Q8L840.1|RQL4A_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4A; AltName:
Full=RecQ-like protein 4A; Short=AtRecQ4A;
Short=AtRecQl4A; AltName: Full=SGS1-like protein;
Short=AtSGS1
gi|21539533|gb|AAM53319.1| DNA helicase isolog [Arabidopsis thaliana]
gi|33589672|gb|AAQ22602.1| At1g10930 [Arabidopsis thaliana]
gi|332190544|gb|AEE28665.1| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
Length = 1188
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/364 (48%), Positives = 248/364 (68%), Gaps = 5/364 (1%)
Query: 69 WSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS F W + + VFG ++R NQ+EIINA +SG DV V+M GGGKSL YQLPA
Sbjct: 430 WSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPA 489
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ GI LV+SPL+SLIQDQ+M L IPA L++ ++ I++ L + K+L
Sbjct: 490 LICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLL 549
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KS + LE + G L+ IDEAHC SQWGHDFRPDY++LGILK +FP+
Sbjct: 550 YVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPN 609
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
+P++ALTATAT V+ D+++ L + C+ F + NRPNL+Y V K+ K +++I K+
Sbjct: 610 IPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT---KKCLEDIDKF 666
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GI+YC SR +CE+V++ L++ G A +YH M+ R + +WSK+++
Sbjct: 667 IKENHFD-ECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEIN 725
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ D R
Sbjct: 726 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRV 785
Query: 428 SSMV 431
M+
Sbjct: 786 KHMI 789
>gi|403174685|ref|XP_003333617.2| hypothetical protein PGTG_15039 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171080|gb|EFP89198.2| hypothetical protein PGTG_15039 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 796
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/429 (44%), Positives = 267/429 (62%), Gaps = 43/429 (10%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
+ W + ++GI ++R NQ+ + NAVLS RDVLVIM GGGKSL YQLPAVL EG
Sbjct: 89 WSWTQALHETMKKIWGIESFRLNQEAVCNAVLSNRDVLVIMPTGGGKSLTYQLPAVLSEG 148
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--------------- 177
+LV+SPL++L+ DQ M L G+PA ML ++TS++D I K L
Sbjct: 149 TSLVISPLVALMADQNMHLKEAGVPAEMLNASTSRQDAALIMKRLLHSVVDQKPKRGSKS 208
Query: 178 EKGE--------GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGH 229
KG+ +K+ YVTPEKI+KSK F+S L+K + AGRLS + IDEAHCCS GH
Sbjct: 209 SKGKEKAHEDDLAPIKLCYVTPEKIAKSKTFVSTLQKMYGAGRLSRVIIDEAHCCSSMGH 268
Query: 230 DFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHI-----------RKCIKFV 278
DFRPDYK L ILKT FPD P++ALTAT +V D++++L + + F
Sbjct: 269 DFRPDYKQLSILKTLFPDTPIVALTATCPPRVMVDVLKILKLGPITNADKARPTGTVLFT 328
Query: 279 STINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR 338
S ++RPNL Y V +K + +ID+I ++I++++ S+ GI+Y S+K+ VAQ L +
Sbjct: 329 SPLSRPNLHYQVLKKPATNTDLIDQIVEWIEQNHSGSQ-GIIYTLSQKDTTTVAQGLISQ 387
Query: 339 G---ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKS 395
I+ YHA + + + +VH W + +QV+ T AFGMGI+ P VRFVIHH+L KS
Sbjct: 388 SNGRITTGIYHASLSDSHKHQVHTDWREGSIQVVCATTAFGMGIDAPHVRFVIHHTLPKS 447
Query: 396 VETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWN 455
+E YYQESGRAGRDG S+CLLF++ +D+ R S MV E G+ LY + +Y+
Sbjct: 448 MEGYYQESGRAGRDGQVSDCLLFWKTSDLLRLSGMVASEVDGIPKLYSMTKYAT-----E 502
Query: 456 IEKVRLVIF 464
+E+ R ++F
Sbjct: 503 LERCRSLLF 511
>gi|224070434|ref|XP_002303149.1| predicted protein [Populus trichocarpa]
gi|222840581|gb|EEE78128.1| predicted protein [Populus trichocarpa]
Length = 1194
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 248/364 (68%), Gaps = 5/364 (1%)
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS T F W + + VFG ++R NQ+E+INA +SG DV V+M GGGKSL YQLPA
Sbjct: 435 WSSTNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPA 494
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ GI LV+SPL+SLIQDQ+M L IPA L++ +++ I + L + ++L
Sbjct: 495 LVCPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTEQQEILRELCSDYCKYRLL 554
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KS + LE + G L+ I IDEAHC SQWGHDFRPDYK LGILK +F
Sbjct: 555 YVTPEKVAKSDVLLRNLESLNGRGLLARIVIDEAHCVSQWGHDFRPDYKELGILKKKFEK 614
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P++ALTATAT V+ D+++ L + CI F + NRPNL+Y V K+ K +++I K+
Sbjct: 615 TPVLALTATATASVKEDVVQALGLVDCIVFRQSFNRPNLWYSVIPKT---KKCLEDIDKF 671
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GI+YC SR +CE+VA++L++ G +YH +MD R V +WSK+++
Sbjct: 672 IKENHFD-ECGIIYCLSRMDCEKVAEKLQECGHKTAFYHGNMDAAQRSFVQKQWSKDEIN 730
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ +D R
Sbjct: 731 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRV 790
Query: 428 SSMV 431
M+
Sbjct: 791 KHMI 794
>gi|11121449|emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana]
Length = 1182
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/364 (48%), Positives = 248/364 (68%), Gaps = 5/364 (1%)
Query: 69 WSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS F W + + VFG ++R NQ+EIINA +SG DV V+M GGGKSL YQLPA
Sbjct: 424 WSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPA 483
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ GI LV+SPL+SLIQDQ+M L IPA L++ ++ I++ L + K+L
Sbjct: 484 LICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLL 543
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KS + LE + G L+ IDEAHC SQWGHDFRPDY++LGILK +FP+
Sbjct: 544 YVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPN 603
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
+P++ALTATAT V+ D+++ L + C+ F + NRPNL+Y V K+ K +++I K+
Sbjct: 604 IPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT---KKCLEDIDKF 660
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GI+YC SR +CE+V++ L++ G A +YH M+ R + +WSK+++
Sbjct: 661 IKENHFD-ECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEIN 719
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ D R
Sbjct: 720 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRV 779
Query: 428 SSMV 431
M+
Sbjct: 780 KHMI 783
>gi|241999220|ref|XP_002434253.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215496012|gb|EEC05653.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 556
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/533 (39%), Positives = 311/533 (58%), Gaps = 45/533 (8%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG+ +R NQ E INA L G D ++M GGGKSLCYQLPAV+ EG+ +V+SPL SLI
Sbjct: 24 SVFGLKQFRLNQLEAINAALLGEDCFILMPTGGGKSLCYQLPAVVSEGVTVVISPLKSLI 83
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
DQV L +L +PA+ L+ + D+ +Y L + L++LYVTPEK+S S R + L
Sbjct: 84 YDQVQKLGSLDVPANHLSGDS---DDFSVYSDLRSTQPRLRLLYVTPEKVSASGRLLDAL 140
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ H GRLS IDEAHC SQWGHDFRPDYK L +L+ +F VPMMALTATAT +V+ D
Sbjct: 141 SRLHANGRLSRFVIDEAHCVSQWGHDFRPDYKKLSVLREKFSGVPMMALTATATPRVRTD 200
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV-VIDEIAKYIQESYPNSESGIVYCF 323
++ L +R F+ + NRPNL Y +R KS GKV E+ + ++ + +SGI+YCF
Sbjct: 201 ILHQLGMRDPKWFLQSFNRPNLRYEIRLKS--GKVGTAREVLEVVEGKFAR-QSGIIYCF 257
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SRKEC+ +A+EL + G+ A YHA +D R V RW +K++V+ T+AFGMG++KPD
Sbjct: 258 SRKECDDLAEELSKNGVPAVAYHAGLDDPKRNAVQQRWIDDKVRVVCATIAFGMGVDKPD 317
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG------ 437
VRFV+H++L KS+E +YQESGRAGRDG P+ CLLF+ ADV R MV + +
Sbjct: 318 VRFVVHYTLPKSMEGFYQESGRAGRDGRPASCLLFYSFADVQRIRRMVEMDKASNYAAKQ 377
Query: 438 --LQNLYDIV---------RYSQYPLHWN---IEKVRLVIFEKLQQVNLFCMVVLAGHAQ 483
L NL+ +V R +Q +++ E+ R + + M + A+
Sbjct: 378 THLSNLWHMVNFCENRTDCRRAQVSRNFDRTFCERNRRFACDNCLSRGCWVMKDVTEDAR 437
Query: 484 CIISLLQDIQDNNQRLTM-LQLVDK-------MKIKLKEIDSDLKREEIEQLVLQLIIDR 535
++ ++++ +++T+ + +K ++L +R + ++L+ +LI++
Sbjct: 438 EVVRCVEELCQQRRKVTVNMGCTNKKMTKENFTNLRLHGRGKGYQRTDADRLLRRLILEG 497
Query: 536 VL----------VRIGPFSPGKKIIKLEISSVQKNTADNKKSTKRSLTSSALE 578
L + + PG K +L S + + A KKS ++A E
Sbjct: 498 YLKEESVINYLEMAVSYVHPGSKAAQLVSGSAKVSLAIQKKSRPSESRTAAAE 550
>gi|356528815|ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1160
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/364 (49%), Positives = 246/364 (67%), Gaps = 5/364 (1%)
Query: 69 WSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS F W + VFG ++R NQ+EIINA +SG DV V+M GGGKSL YQLPA
Sbjct: 387 WSSYDFPWTKELEVNNKKVFGNHSFRPNQREIINASMSGCDVFVLMPTGGGKSLTYQLPA 446
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++R GI LV+SPL+SLIQDQ+M L IPA L++ +++ I + L + K+L
Sbjct: 447 LIRPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWAEQQEILRELNSDYCKYKLL 506
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK+++S + L+ H L+ I IDEAHC SQWGHDFRPDY+ LGILK +FP+
Sbjct: 507 YVTPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 566
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P++ALTATAT V+ D+++ L + CI F + NRPNL+Y V K+ K +++I K+
Sbjct: 567 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVVPKT---KKCLEDIDKF 623
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+ ++ + E GI+YC SR +CE+VA++L++ G +YH MD R V +WSK+++
Sbjct: 624 IRVNHFD-ECGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPAQRASVQKQWSKDEIN 682
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ +D R
Sbjct: 683 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCILYYNYSDYIRV 742
Query: 428 SSMV 431
M+
Sbjct: 743 KHML 746
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 544 SPGKKIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASISG-GILPHSVLS 602
+P K + E +V + + ++ + S+ L L LRK L + +G G++PH +
Sbjct: 950 TPAKGSLTSEKLNVMQIDPPSPQTEVDHILSAKLYNALRLLRKSLVTEAGEGVMPHHIFG 1009
Query: 603 SQLIRLISARKPSTMEEASSNHLEKI--IGKLKTGKYGSRILEVISKCGNSEQQHDN 657
+ + LIS R P T EE L I IGK K KYG ++LE I K N + DN
Sbjct: 1010 NATLLLISKRVPRTKEE-----LLDINGIGKAKVSKYGDQLLETIEKTVNEHYKLDN 1061
>gi|390599702|gb|EIN09098.1| ATP-dependent DNA helicase [Punctularia strigosozonata HHB-11173
SS5]
Length = 828
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/487 (40%), Positives = 295/487 (60%), Gaps = 35/487 (7%)
Query: 9 ELENVEAEVRLVQEQIKQL--------VDRQDQLYERQS-ELKSLLEAFEASRGSPIQYG 59
E+ +++E+R + QI QL R+++L E +S + S + AS
Sbjct: 40 EINKLDSELREIDAQIAQLKATRGTIVTQRENKLKEYESLQSDSFRPSANASHNGISDAK 99
Query: 60 GSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
+SST ++ S ++W + VFGI +R Q+ + NA + GRD++ +M GGGK
Sbjct: 100 ATSSTTIDYASSDWDWTPQLRRAMKKVFGIDDFRLCQEAVCNANMDGRDIICVMPTGGGK 159
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL-- 177
SL YQLPA L G LV+SPL+SLI DQ+M L G+ A M+T +TSK + K IY L
Sbjct: 160 SLTYQLPAQLLPGTTLVISPLISLITDQIMHLHEAGVQAVMMTGSTSKTEIKDIYSRLTG 219
Query: 178 --EKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDY 235
+ GE+K+ YVTPEK+SKSK FMS L++ GRL+ + IDEAHC S+ GHDFRPDY
Sbjct: 220 PIDSQRGEIKLCYVTPEKLSKSKAFMSVLQRMDEQGRLTRVVIDEAHCVSELGHDFRPDY 279
Query: 236 KNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIK-------------FVSTIN 282
K L ++ FP VP++ L+AT KV+N ++ +L + I+ F + +
Sbjct: 280 KELSKIRVLFPRVPILCLSATCPPKVRNSILHILRLDPVIQCGGSISSKKGTVYFSAPLY 339
Query: 283 RPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG--- 339
R NL Y V K + K V+ +A+YI ++ + +SGIVYC+ +K+ E VA LR+
Sbjct: 340 RKNLHYKVLPKPAASKDVLKVMAQYILTNHAD-QSGIVYCYRKKDTEDVAAGLREHSDSR 398
Query: 340 ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETY 399
I YHAD+ A+E++H RW K +++++ T+AFG+GI+K DVRFV+HHS+SKS++ Y
Sbjct: 399 IKTGVYHADIGDTAKEQLHTRWRKGEIKIVCATIAFGLGIDKGDVRFVLHHSMSKSLDGY 458
Query: 400 YQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV 459
YQE+GRAGRDG + C+L++RP D S++V+ + GL L ++R++ ++E+
Sbjct: 459 YQETGRAGRDGKDASCVLYYRPQDASSLSALVYGQRDGLDKLSQMLRFAH-----DVEEC 513
Query: 460 RLVIFEK 466
R ++F K
Sbjct: 514 RKILFAK 520
>gi|297849458|ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
gi|297338452|gb|EFH68869.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
Length = 1189
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/364 (48%), Positives = 247/364 (67%), Gaps = 5/364 (1%)
Query: 69 WSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS F W + + VFG ++R NQ+EIINA +SG DV V+M GGGKSL YQLPA
Sbjct: 428 WSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPA 487
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ GI LV+SPL+SLIQDQ+M L IPA L++ ++ I++ L + K+L
Sbjct: 488 LICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLL 547
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KS + LE + G L+ IDEAHC SQWGHDFRPDY++LGILK +FP+
Sbjct: 548 YVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPN 607
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
+P++ALTATAT V+ D+++ L + C+ F + NRPNL+Y V K+ K +++I K+
Sbjct: 608 IPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT---KKCLEDIDKF 664
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GI+YC SR +CE+V++ L++ G +YH M+ R + +WSK+++
Sbjct: 665 IKENHFD-ECGIIYCLSRMDCEKVSERLQEFGHKTAFYHGSMEPEQRAFIQTQWSKDEIN 723
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ D R
Sbjct: 724 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRV 783
Query: 428 SSMV 431
M+
Sbjct: 784 KHMI 787
>gi|407425855|gb|EKF39533.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma cruzi
marinkellei]
Length = 1364
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/416 (45%), Positives = 255/416 (61%), Gaps = 23/416 (5%)
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
+V +SG F W + ++VFG+ YR Q EI+NA + GRD V++ GGGKSLCY
Sbjct: 358 SVNRYSGENFSWSADLRRTMIDVFGLHQYRFLQLEIMNACMDGRDAFVLLPTGGGKSLCY 417
Query: 124 QLPAVLREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
QLPA++ + +V+SPL+SLIQDQV L A IPA LT TS + ++ G
Sbjct: 418 QLPALMPNPAQVTIVISPLISLIQDQVYALIANDIPAIALTGQTSDAPRRALFAEWASGR 477
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
++YVTPE +S F+ L G LS +DEAHC SQWGHDFRPDY+ L IL
Sbjct: 478 IVHTLVYVTPEYFGRSDHFVQCLVHLASRGLLSRFVVDEAHCVSQWGHDFRPDYRKLTIL 537
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVRE-KSSVGKVV 300
K FP +P+ ALTATAT VQ D++ L ++ + F + NR NL Y VR+ SVG+VV
Sbjct: 538 KQHFPAIPISALTATATDMVQQDIISTLRLQDALVFKGSFNRQNLSYSVRKVGRSVGQVV 597
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+D I+ +P GIVYC SRK+CE +A EL GI A YYHA+ + + + R
Sbjct: 598 VD----LIKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHAEA--SGKNEKQER 651
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W+K++LQVI T+AFGMGINKPDVRFVIH ++ KS+E YYQESGRAGRDGLPSEC+L
Sbjct: 652 WTKDELQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLPSECILLCS 711
Query: 421 PADVPRQSSMVFYEN---SGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF 473
P+D R M++ N + + +LY ++ Y+ +H ++QQ+ F
Sbjct: 712 PSDKQRHEQMIYGSNDWKTSMSSLYRMLAYTMNDVHCR----------RMQQLGYF 757
>gi|358387252|gb|EHK24847.1| hypothetical protein TRIVIDRAFT_212358 [Trichoderma virens Gv29-8]
Length = 1658
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 181/356 (50%), Positives = 239/356 (67%), Gaps = 8/356 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E INA L+G D V+M GGGKSLCYQLPAV++
Sbjct: 766 WSADVQKTLKDRFRMKGFRQNQLEAINATLAGDDAFVLMPTGGGKSLCYQLPAVVKSGRT 825
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLY 188
G+ +VVSPLLSL+QDQV + ALGI A S S E ++ + A + E +++LY
Sbjct: 826 RGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNSECSPEYKRQVMSAFNERNPEHFIELLY 885
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE SKS +FM+ L+ + + + + I IDEAHC SQWGHDFRPDYK LG L+++FP+V
Sbjct: 886 VTPEMASKSPQFMNALQSLYRSRKFARIVIDEAHCVSQWGHDFRPDYKTLGQLRSKFPEV 945
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATATQ V D+ L + C F + NRPNL+Y VR KSS VV +IA I
Sbjct: 946 PVMALTATATQNVIVDIKHNLGMNNCQVFSQSFNRPNLYYEVRPKSS-NPVVTQQIAALI 1004
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
YPN +GIVY SRK+ E VAQ+L GI+A +YHA + + +V W K +++V
Sbjct: 1005 NSKYPNV-TGIVYTISRKQAEDVAQKLSDNGITARHYHAAITPTEKVEVQTAWQKGQVKV 1063
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V T+AFGMGI+KPDVR+VIHH + KS+E YYQE+GRAGRDG PS+C+LF+ AD+
Sbjct: 1064 VVATIAFGMGIDKPDVRYVIHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKADI 1119
>gi|195451292|ref|XP_002072850.1| GK13825 [Drosophila willistoni]
gi|194168935|gb|EDW83836.1| GK13825 [Drosophila willistoni]
Length = 1457
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 191/409 (46%), Positives = 261/409 (63%), Gaps = 21/409 (5%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F+ SR FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG
Sbjct: 679 FDHSSRMTQALSYSFGLKSFRPNQLQVINAALLGNDCFVLMPTGGGKSLCYQLPAILTEG 738
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
+ +V+SPL SLI DQV LA+L I A ++ S D IY+ LE +K+LYVTPE
Sbjct: 739 VTIVISPLKSLIFDQVNKLASLDICAKSMSGEQSMSDAMTIYRDLESHPPLVKLLYVTPE 798
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
KIS S RF L+ + +S IDEAHC SQWGHDFRPDYK LGIL+ +FP+VP MA
Sbjct: 799 KISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGILRKRFPNVPTMA 858
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTATAT +V+ D++ L++ +C F+S+ NR NL Y V K G +++I+ +I+ S
Sbjct: 859 LTATATPRVRLDILSQLNLTQCKWFLSSFNRSNLRYKVLPKK--GASTLEDISAFIK-SR 915
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
P + SGI+YC SRKEC+ V+Q++ + GI + YHA + RE W +K++VI T
Sbjct: 916 PANSSGIIYCLSRKECDDVSQKMCKAGIRSVAYHAGLSDTERESRQKDWILSKVRVICAT 975
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
+AFGMGI+KPDVRFV+H+SL KS+E YYQE+GRAGRDG +EC+L++ +D+ R M+
Sbjct: 976 IAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDIAECILYYNYSDMLRLKKMLD 1035
Query: 433 YENS--------GLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF 473
+ + + NLY IV Y + NI R + QQ++ F
Sbjct: 1036 GDRALNYNVKKMHIDNLYRIVGYCE-----NITDCR-----RAQQLDYF 1074
>gi|356541884|ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1534
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 181/364 (49%), Positives = 245/364 (67%), Gaps = 5/364 (1%)
Query: 69 WSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS F W + VFG ++R NQ+EIINA +SG DV V+M GGGKSL YQLPA
Sbjct: 761 WSSYDFSWTKELEVNNKKVFGNHSFRPNQREIINASMSGCDVFVLMPTGGGKSLTYQLPA 820
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ GI LV+SPL+SLIQDQ+M L IPA L++ +++ I + L + K+L
Sbjct: 821 LIHPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTEQQDILRELNSDYCKYKLL 880
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK+++S + L+ H L+ I IDEAHC SQWGHDFRPDY+ LGILK +FP+
Sbjct: 881 YVTPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 940
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P++ALTATAT V+ D+++ L + CI F + NRPNL Y V K+ K +++I K+
Sbjct: 941 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLRYSVIPKT---KKCLEDIDKF 997
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GIVYC SR +CE+VA++L++ G +YH MD R V +WSK+++
Sbjct: 998 IRENHFD-ECGIVYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPVQRASVQKQWSKDEIN 1056
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ +D R
Sbjct: 1057 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQHSSCVLYYTYSDYIRV 1116
Query: 428 SSMV 431
M+
Sbjct: 1117 KHML 1120
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 541 GPFSPGK-KIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASISG-GILPH 598
G + GK +++++ S Q D + S+ L L LRK L + +G G++PH
Sbjct: 1328 GSLTSGKLNVMQIDPPSPQTEVDD--------ILSAKLYNALRLLRKSLVTEAGDGVMPH 1379
Query: 599 SVLSSQLIRLISARKPSTMEEASSNHLEKI--IGKLKTGKYGSRILEVISKCGNSEQQHD 656
+ + + LIS R P EE L I IGK K KYG ++LE I K N + D
Sbjct: 1380 HIFGNATLLLISKRVPRRKEE-----LLDINGIGKAKVSKYGDQLLESIEKTINEHYKLD 1434
>gi|195329754|ref|XP_002031575.1| GM26077 [Drosophila sechellia]
gi|194120518|gb|EDW42561.1| GM26077 [Drosophila sechellia]
Length = 1268
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 289/489 (59%), Gaps = 41/489 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 514 FGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 573
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ LA+L I A L+ D IY+ LE +K+LYVTPEKIS S RF L+
Sbjct: 574 QINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKISSSARFQDTLDT 633
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +S IDEAHC SQWGHDFRPDYK LG+LK +FP+VP +ALTATAT +V+ D++
Sbjct: 634 LNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPTIALTATATPRVRLDIL 693
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L+++ C F+S+ NR NL Y V K V +D+I++YI+ S P SGI+YC SRK
Sbjct: 694 AQLNLKNCKWFLSSFNRSNLRYRVLPKKGVS--TLDDISRYIR-SKPAHFSGIIYCLSRK 750
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC++ ++++ + GI A YHA + RE W K++VI TVAFGMGI+KPDVRF
Sbjct: 751 ECDETSKKMCKDGIRAVSYHAGLTDTERESRQKDWLTGKIRVICATVAFGMGIDKPDVRF 810
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E YYQE+GRAGRDG ++C+L++ +D+ R M+ + + +
Sbjct: 811 VLHYSLPKSIEGYYQEAGRAGRDGDMADCILYYNYSDMLRIKKMLDSDKALQYNVKKIHV 870
Query: 439 QNLYDIVRYSQ-------------YPLHWNIEKV---RLVIFEKLQQVNLFCMVVLAGHA 482
NLY IV Y + + H+ E+ R + + V HA
Sbjct: 871 DNLYRIVGYCENLTDCRRAQQLDYFGEHFTSEQCLENRETACDNCINKRAYKAVDAVEHA 930
Query: 483 QCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEIDS-------------DLKREEIEQLV 528
+ ++D+ R T+L + D +K K+K+I D ++ ++ +L+
Sbjct: 931 RKAARAVKDLCSGRSRFTLLHIADVLKGSKIKKIIDFNHHKTPHHGALKDWEKNDVHRLL 990
Query: 529 LQLIIDRVL 537
+++ID L
Sbjct: 991 RKMVIDGFL 999
>gi|198454689|ref|XP_001359676.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
gi|198132910|gb|EAL28826.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
Length = 1349
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 202/489 (41%), Positives = 292/489 (59%), Gaps = 41/489 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 585 FGLKSFRPNQLQVINATLLRNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 644
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ LA+L I + L+ + D IY+ LE +K+LYVTPEKIS S RF L+
Sbjct: 645 QINKLASLDICSKSLSGDVAMADVMAIYRDLESHPPMVKLLYVTPEKISSSARFQDILDT 704
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +S IDEAHC SQWGHDFRPDYK LGILK +FP+VP +ALTATAT +V+ D++
Sbjct: 705 LNANNYISRFVIDEAHCVSQWGHDFRPDYKKLGILKKRFPNVPTIALTATATPRVRLDIL 764
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L+++ C F+S+ NR NL Y V K G ID+++ YI+ PNS SGI+YC SRK
Sbjct: 765 SQLNLKNCKWFLSSFNRSNLRYKVLPKK--GASTIDDMSAYIRTKPPNS-SGIIYCLSRK 821
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC++VA+++ + G+ A YHA + + RE W NK++VI T+AFGMGI+KPDVRF
Sbjct: 822 ECDEVAKKMCKDGVRAVAYHAGLTDSEREGRQKDWLTNKIRVICATIAFGMGIDKPDVRF 881
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E YYQE+GRAGRDG ++C+L++ +D+ R M+ + + +
Sbjct: 882 VLHYSLPKSIEGYYQEAGRAGRDGEVADCILYYNYSDMLRLKKMMDGDKALQYNVKKMHI 941
Query: 439 QNLYDIVRYSQ-------------YPLHWNIEKV---RLVIFEKLQQVNLFCMVVLAGHA 482
NLY IV Y + + H+ E+ R + + V A
Sbjct: 942 DNLYRIVGYCENITDCRRAQQLDYFGEHFTSEQCLENRATACDNCGNKRAYQPVDALEPA 1001
Query: 483 QCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEIDS-------------DLKREEIEQLV 528
+ ++D+ R T+L + D +K K+K+I D ++ +I++L+
Sbjct: 1002 RKAARAVKDLCSGRSRFTLLHISDVLKGSKIKKIVDFGHHNTPHHGSLKDWEKNDIQRLL 1061
Query: 529 LQLIIDRVL 537
+++ID L
Sbjct: 1062 RKMVIDGYL 1070
>gi|71017581|ref|XP_759021.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
gi|46098743|gb|EAK83976.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
Length = 1291
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 240/366 (65%), Gaps = 7/366 (1%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL--- 129
+ W ++ V F + +R NQ E IN LSGRDV V+M GGGKSLCYQLPA +
Sbjct: 397 YPWTTQVGYVLKKFFKLKRFRRNQLEAINGTLSGRDVFVLMPTGGGKSLCYQLPACIDTD 456
Query: 130 -REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
G+++V+SPLLSLI+DQV+ L +PA LT S D + + G L++LY
Sbjct: 457 KATGVSIVISPLLSLIEDQVLDLVRKDVPAVKLTGDMSANDRRDAFNTARDRVGSLRLLY 516
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE I +S + M L+ + RL+ I +DEAHC SQWGHDFRP Y LG L+ ++P V
Sbjct: 517 VTPEFIRQSNQAMELLDLLYSQKRLARIVVDEAHCVSQWGHDFRPHYTELGALRDKYPQV 576
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATA +V D+ L +R ++ S+ NRPNL Y VR+K +IDEIA +I
Sbjct: 577 PIMALTATANARVIKDVKSCLKMRNVLQLSSSFNRPNLEYQVRKKPK--SKLIDEIASFI 634
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
S+ + E GIVYCFSR+ CE VA +L++ GI+A +YHA + + R KV RW + +V
Sbjct: 635 LTSHKD-ECGIVYCFSRESCETVADDLKKHGITAHHYHAKLGKDDRSKVQQRWKNGEYKV 693
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
IV T+AFGMGI+KPDVRFVIHHSL KS+E YYQE+GRAGRDGL S C+L++ DV R
Sbjct: 694 IVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGLDSVCILYYSWTDVRRME 753
Query: 429 SMVFYE 434
+M+ E
Sbjct: 754 NMMLSE 759
>gi|343473260|emb|CCD14808.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 1399
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/455 (43%), Positives = 270/455 (59%), Gaps = 28/455 (6%)
Query: 11 ENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVENWS 70
E V R E +Q + R D RQ S G P+ S VEN+S
Sbjct: 364 EKVNTSGRFTWEACEQALLRSD----RQG----------CSNGPPVPLPVSD---VENYS 406
Query: 71 G-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
G F W + V ++VFG+ YR Q EI+NA + RDV V++ GGGKSLCYQLPA+L
Sbjct: 407 GEGFPWSAELRRVMIDVFGLHQYRFLQLEIMNACMDERDVFVLLPTGGGKSLCYQLPALL 466
Query: 130 REG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
+ +V+SPL+SLIQDQV L A GIP+ LT T+ ++ ++ G+ ++
Sbjct: 467 PNPAQVTIVISPLISLIQDQVYALMANGIPSMALTGQTNDSAKRKLFNEWAMGQISCALV 526
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPE +S F+ L + G L+ IDEAHC SQWGHDFRPDY+ L +LK QFP
Sbjct: 527 YVTPEYFGRSDYFVQSLSRVASRGLLNRFVIDEAHCVSQWGHDFRPDYRKLAMLKQQFPT 586
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P+ ALTATAT VQ D++ L ++K + F + NR NL Y VR+ VGK V + +A
Sbjct: 587 TPISALTATATDVVQQDVVRTLGLQKALMFRGSFNRSNLGYSVRK---VGKGVAEVVADI 643
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMD-INAREKVHMRWSKNKL 366
I+ +P GIVYC SRK CE +++ L GI A YYH+D D N R++ +W+K++L
Sbjct: 644 IKNQFPRRSCGIVYCLSRKNCENMSKALTAHGIRASYYHSDADEKNERQE---QWTKDEL 700
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
QV+ T+AFGMGINKPDVRFVIH ++ KS+E YYQESGRAGRDGL S+C+L + P D
Sbjct: 701 QVLCATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLASQCILLYSPNDKHC 760
Query: 427 QSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRL 461
S M++ +L + Y L+ N++ R+
Sbjct: 761 HSHMIYGTKDWRASLSSLTHMLAYTLN-NVQCRRM 794
>gi|5281068|gb|AAD41441.1|U92536_1 RECQ helicase homolog [Drosophila melanogaster]
Length = 1487
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/489 (40%), Positives = 288/489 (58%), Gaps = 41/489 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 733 FGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 792
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ LA+L I A L+ D IY+ LE +K+LYVTPEKIS S RF L+
Sbjct: 793 QINKLASLDICAESLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKISSSARFQDTLDT 852
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +S IDEAHC SQWGHDFRPDYK LG+LK +FP+VP +ALTATAT +V+ D++
Sbjct: 853 LNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPTIALTATATPRVRLDIL 912
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L+++ C F+S+ NR NL Y V K V +D+I++YI+ S P SGI+YC SRK
Sbjct: 913 AQLNLKNCKWFLSSFNRSNLRYRVLPKKGVS--TLDDISRYIR-SKPQHFSGIIYCLSRK 969
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC++ ++++ + G+ A YHA + RE W K++VI TVAFGMGI+KPDVRF
Sbjct: 970 ECDETSKKMCKDGVRAVSYHAGLTDTDRESRQKDWLTGKMRVICATVAFGMGIDKPDVRF 1029
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E YYQE+GRAGRDG ++C+L++ +D+ R M+ + + +
Sbjct: 1030 VLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYSDMLRIKKMLDSDKALQYNVKKIHV 1089
Query: 439 QNLYDIVRYSQ-------------YPLHWNIEKV---RLVIFEKLQQVNLFCMVVLAGHA 482
NLY IV Y + + H+ E+ R + + V HA
Sbjct: 1090 DNLYRIVGYCENLTDCRRAQQLDYFGGHFTSEQCLENRETACDNCINKRAYKAVDALEHA 1149
Query: 483 QCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEIDS-------------DLKREEIEQLV 528
+ ++D+ R T+L + D +K K+K+I D + ++ +L+
Sbjct: 1150 RKAARAVKDLCSGRSRFTLLHIADVLKGSKIKKIIDFNHHKTPHHGVLKDWDKNDVHRLL 1209
Query: 529 LQLIIDRVL 537
+++ID L
Sbjct: 1210 RKMVIDGFL 1218
>gi|24646066|ref|NP_524319.2| bloom syndrome helicase ortholog [Drosophila melanogaster]
gi|17366114|sp|Q9VGI8.1|BLM_DROME RecName: Full=Bloom syndrome protein homolog; Short=Dmblm; AltName:
Full=Mutagen-sensitive protein 309; AltName: Full=RecQ
helicase homolog
gi|7299503|gb|AAF54691.1| bloom syndrome helicase ortholog [Drosophila melanogaster]
Length = 1487
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/489 (40%), Positives = 288/489 (58%), Gaps = 41/489 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 733 FGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 792
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ LA+L I A L+ D IY+ LE +K+LYVTPEKIS S RF L+
Sbjct: 793 QINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKISSSARFQDTLDT 852
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +S IDEAHC SQWGHDFRPDYK LG+LK +FP+VP +ALTATAT +V+ D++
Sbjct: 853 LNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPTIALTATATPRVRLDIL 912
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L+++ C F+S+ NR NL Y V K V +D+I++YI+ S P SGI+YC SRK
Sbjct: 913 AQLNLKNCKWFLSSFNRSNLRYRVLPKKGVS--TLDDISRYIR-SKPQHFSGIIYCLSRK 969
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC++ ++++ + G+ A YHA + RE W K++VI TVAFGMGI+KPDVRF
Sbjct: 970 ECDETSKKMCKDGVRAVSYHAGLTDTDRESRQKDWLTGKMRVICATVAFGMGIDKPDVRF 1029
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E YYQE+GRAGRDG ++C+L++ +D+ R M+ + + +
Sbjct: 1030 VLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYSDMLRIKKMLDSDKALQYNVKKIHV 1089
Query: 439 QNLYDIVRYSQ-------------YPLHWNIEKV---RLVIFEKLQQVNLFCMVVLAGHA 482
NLY IV Y + + H+ E+ R + + V HA
Sbjct: 1090 DNLYRIVGYCENLTDCRRAQQLDYFGEHFTSEQCLENRETACDNCINKRAYKAVDALEHA 1149
Query: 483 QCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEIDS-------------DLKREEIEQLV 528
+ ++D+ R T+L + D +K K+K+I D + ++ +L+
Sbjct: 1150 RKAARAVKDLCSGRSRFTLLHIADVLKGSKIKKIIDFNHHKTPHHGVLKDWDKNDVHRLL 1209
Query: 529 LQLIIDRVL 537
+++ID L
Sbjct: 1210 RKMVIDGFL 1218
>gi|71402467|ref|XP_804144.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma cruzi strain CL
Brener]
gi|70866957|gb|EAN82293.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1310
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 189/416 (45%), Positives = 255/416 (61%), Gaps = 23/416 (5%)
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
+V +SG F W + ++VFG+ YR Q EI+NA + GRD V++ GGGKSLCY
Sbjct: 358 SVNRYSGENFSWSADLRRTMIDVFGLHQYRFLQLEIMNACMDGRDAFVLLPTGGGKSLCY 417
Query: 124 QLPAVLREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
QLPA++ + +V+SPL+SLIQDQV L A IPA LT TS + ++ G
Sbjct: 418 QLPALMPNPAQVTIVISPLISLIQDQVYALIANDIPAIALTGQTSDAPRRALFAEWASGR 477
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
++YVTPE +S F+ L G LS +DEAHC SQWGHDFRPDY+ L IL
Sbjct: 478 IVHTLVYVTPEYFGRSDHFVQCLVHLASRGLLSRFVVDEAHCVSQWGHDFRPDYRKLAIL 537
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVRE-KSSVGKVV 300
K FP +P+ ALTATAT VQ D++ L ++ + F + NR NL Y VR+ SVG+VV
Sbjct: 538 KQHFPAIPISALTATATDMVQQDIISTLRLQDALVFKGSFNRQNLSYSVRKVGRSVGQVV 597
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+D I+ +P GIVYC SRK+CE +A EL GI A YYHA+ + + + R
Sbjct: 598 VD----LIKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHAEA--SGKNEKQER 651
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W+K+++QVI T+AFGMGINKPDVRFVIH ++ KS+E YYQESGRAGRDGLPSEC+L
Sbjct: 652 WTKDEIQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLPSECILLCS 711
Query: 421 PADVPRQSSMVFYEN---SGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF 473
P+D R M++ N + + +LY ++ Y+ +H ++QQ+ F
Sbjct: 712 PSDKQRHEQMIYGSNDWKTSMSSLYRMLAYTINDVHCR----------RMQQLGYF 757
>gi|1931649|gb|AAB65484.1| DNA helicase isolog; 74946-78841 [Arabidopsis thaliana]
Length = 665
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 178/371 (47%), Positives = 250/371 (67%), Gaps = 8/371 (2%)
Query: 65 AVENWS----GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
A ++W+ +F D VFG ++R NQ+EIINA +SG DV V+M GGGKS
Sbjct: 94 ACDSWNTPRDSSFSVDRYVQVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKS 153
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
L YQLPA++ GI LV+SPL+SLIQDQ+M L IPA L++ ++ I++ L
Sbjct: 154 LTYQLPALICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSE 213
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+ K+LYVTPEK++KS + LE + G L+ IDEAHC SQWGHDFRPDY++LGI
Sbjct: 214 HSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGI 273
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK +FP++P++ALTATAT V+ D+++ L + C+ F + NRPNL+Y V K+ K
Sbjct: 274 LKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT---KKC 330
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+++I K+I+E++ + E GI+YC SR +CE+V++ L++ G A +YH M+ R + +
Sbjct: 331 LEDIDKFIKENHFD-ECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQ 389
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
WSK+++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++
Sbjct: 390 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYG 449
Query: 421 PADVPRQSSMV 431
D R M+
Sbjct: 450 YGDYIRVKHMI 460
>gi|195157038|ref|XP_002019403.1| GL12253 [Drosophila persimilis]
gi|194115994|gb|EDW38037.1| GL12253 [Drosophila persimilis]
Length = 1349
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 202/489 (41%), Positives = 292/489 (59%), Gaps = 41/489 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 585 FGLKSFRPNQLQVINATLLRNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 644
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ LA+L I + L+ + D IY+ LE +K+LYVTPEKIS S RF L+
Sbjct: 645 QINKLASLDICSKSLSGDVAMADVMAIYRDLESHPPMVKLLYVTPEKISSSARFQDILDT 704
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +S IDEAHC SQWGHDFRPDYK LGILK +FP+VP +ALTATAT +V+ D++
Sbjct: 705 LNANNYISRFVIDEAHCVSQWGHDFRPDYKKLGILKKRFPNVPTIALTATATPRVRLDIL 764
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L+++ C F+S+ NR NL Y V K G ID+++ YI+ PNS SGI+YC SRK
Sbjct: 765 SQLNLKNCKWFLSSFNRSNLRYKVLPKK--GASTIDDMSAYIRTKPPNS-SGIIYCLSRK 821
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC++VA+++ + G+ A YHA + + RE W NK++VI T+AFGMGI+KPDVRF
Sbjct: 822 ECDEVAKKMCKDGVRAVAYHAGLTDSEREGRQKDWLTNKIRVICATIAFGMGIDKPDVRF 881
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E YYQE+GRAGRDG ++C+L++ +D+ R M+ + + +
Sbjct: 882 VLHYSLPKSIEGYYQEAGRAGRDGEVADCILYYNYSDMLRLKKMMDGDKALQYNVKKMHI 941
Query: 439 QNLYDIVRYSQ-------------YPLHWNIEKV---RLVIFEKLQQVNLFCMVVLAGHA 482
NLY IV Y + + H+ E+ R + + V A
Sbjct: 942 DNLYRIVGYCENITDCRRAQQLDYFGEHFTSEQCLENRATACDNCGNKRAYQPVDALEPA 1001
Query: 483 QCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEIDS-------------DLKREEIEQLV 528
+ ++D+ R T+L + D +K K+K+I D ++ +I++L+
Sbjct: 1002 RKAARAVKDLCSGRSRFTLLHISDVLKGSKIKKIVDFGHHNTPHHGSLKDWEKNDIQRLL 1061
Query: 529 LQLIIDRVL 537
+++ID L
Sbjct: 1062 RKMVIDGYL 1070
>gi|345486372|ref|XP_001605988.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1211
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 231/634 (36%), Positives = 350/634 (55%), Gaps = 93/634 (14%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ INAV+ G D V+M GGGKSLCYQLPA+L G+ +V+SPL SLI D
Sbjct: 523 FGLHQFRPNQLPAINAVILGHDCFVLMPTGGGKSLCYQLPALLAPGVTIVISPLRSLIVD 582
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q L +L I A LT S E +Y+ L E LK+LYVTPEKISKS +F L +
Sbjct: 583 QTQKLLSLDISALYLTGDLSNEQMNGVYRKLYNTESNLKLLYVTPEKISKSTKFCDSLLR 642
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G+L+ IDE HC SQWGHDFRPDYK L +L+ +FP VP++ALTATATQ+V++D++
Sbjct: 643 LYRDGKLARFVIDEVHCVSQWGHDFRPDYKKLSMLRERFPGVPIIALTATATQRVRSDIL 702
Query: 267 EMLHIRKCIKFVSTINRPNLFYMV--REKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
LH++ F+S+ NRPNL Y V R+ ++V+D I+ +PN + GI+YCFS
Sbjct: 703 HQLHLQSPKWFISSFNRPNLRYTVTLRKSKYPYQLVLD----LIKTKFPN-DCGIIYCFS 757
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R +C+ +A+ L++ GI A YHA +D R ++W K++VI T+AFGMGI+KP+V
Sbjct: 758 RNDCDNLAEALKKEGIQALSYHAGLDDKVRTDRQIQWVSEKVKVICATIAFGMGIDKPNV 817
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV---FYEN-----S 436
R+VIH ++ KS+E YYQESGRAGRDG P++C+L + +D+ R +M+ Y N +
Sbjct: 818 RYVIHATMPKSIEGYYQESGRAGRDGEPADCILLYNYSDMHRYRTMMESNEYANKEALKT 877
Query: 437 GLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF-------------------CMVV 477
L NL+ IV + + N+ R + Q+N F C++
Sbjct: 878 HLDNLFKIVHFCE-----NMADCRRAL-----QLNYFGEMFDRQLCIANMETTCDNCLIY 927
Query: 478 -------LAGHAQCIISLLQDIQDNNQ-RLTMLQLVDKMK-IKLKEIDS----------D 518
+ A+ ++ L+Q++ Q +T LQ+VD K + +I +
Sbjct: 928 DQFFNLDVTKDAKALVRLIQELHRVKQNNVTALQVVDIYKGSNVSDIRNTYHEWYGLGHS 987
Query: 519 LKREEIEQLVLQLIIDRVL---------VRIGPFSPGKKIIK-LEISSVQKNTADN---K 565
L + EIE+++ L+I L + +PG + + L ++++K + K
Sbjct: 988 LTKYEIERILHNLVIQGFLCENLEPNHGIVCAYLAPGLRAKEILSQNNIKKKPPEKIQPK 1047
Query: 566 KSTKRSLTSSALEFELDELRK----ELASISGGIL------PHSVLSSQLIRLISARKPS 615
K++ S S+ + EL +L + EL I GI +S+++ +R++S + P
Sbjct: 1048 KTSTTSQMSAVINVELKDLEQRCYNELLEIVNGIAGALDVSANSIMNVVALRVMSQQLPC 1107
Query: 616 TMEEASSNHLEKI--IGKLKTGKYGSRILEVISK 647
E + KI + + KYG +L+V K
Sbjct: 1108 DREA-----MLKIPHVTEANFEKYGKALLDVTQK 1136
>gi|195501810|ref|XP_002097953.1| GE10090 [Drosophila yakuba]
gi|194184054|gb|EDW97665.1| GE10090 [Drosophila yakuba]
Length = 1490
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/537 (39%), Positives = 306/537 (56%), Gaps = 66/537 (12%)
Query: 32 DQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVENWSGTFEWDSRADDV--------- 82
+Q++ + + KS + A ++ S + SS+ + SG F + D +
Sbjct: 663 EQMHSQAAANKSAVSAVPSTSKSVVTAKLSSAPDSQKLSGNFHANVHNDGITGEFDGQKF 722
Query: 83 ----RL-----NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGI 133
RL FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG+
Sbjct: 723 EHSTRLMHGLSYSFGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGV 782
Query: 134 ALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEK 193
+V+SPL SLI DQ+ LA+L I A L+ D IY+ LE +K+LYVTPEK
Sbjct: 783 TIVISPLKSLIFDQINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEK 842
Query: 194 ISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMAL 253
IS S RF L+ + +S IDEAHC SQWGHDFRPDYK LG+LK +FP+VP +AL
Sbjct: 843 ISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPTIAL 902
Query: 254 TATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYP 313
TATAT +V+ D++ L+++ C F+S+ NR NL YMV K G +D+I++YI+ S P
Sbjct: 903 TATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYMVLPKK--GTSTLDDISRYIR-SKP 959
Query: 314 NSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTV 373
SGI+YC SRKEC++ ++++ + G+ + YHA + + RE W K++VI T+
Sbjct: 960 AHFSGIIYCLSRKECDETSKKMCKDGVRSVAYHAGLTDSEREGRQKDWLTGKIRVICATI 1019
Query: 374 AFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFY 433
AFGMGI+KPDVRFV+H+SL KS+E YYQE+GRAGRDG +EC+L++ AD+ R M+
Sbjct: 1020 AFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVAECILYYNYADMLRLKKMMDS 1079
Query: 434 ENS--------GLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF------------ 473
+ + + NLY IV Y + N+ R + QQ++ F
Sbjct: 1080 DKALQYNVKKIHVDNLYRIVGYCE-----NLTDCR-----RAQQLDYFGEHFTSEQCLEN 1129
Query: 474 -------CMVVLA-------GHAQCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEI 515
C+ A HA+ ++D+ R T+L + D +K K+K+I
Sbjct: 1130 KGTACDNCLNKRAYKALDALEHARKAARAVKDLCSGRSRFTLLHIADVLKGSKIKKI 1186
>gi|157104176|ref|XP_001648286.1| blooms syndrome DNA helicase [Aedes aegypti]
gi|108880401|gb|EAT44626.1| AAEL004039-PA [Aedes aegypti]
Length = 1406
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 257/397 (64%), Gaps = 22/397 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L G+ +VVSPL SLI D
Sbjct: 669 FGLQSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPALLTNGVTIVVSPLKSLILD 728
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L++L I A L+ S +E+ IY L+ ++K+LYVTPEKIS S RF + L
Sbjct: 729 QVNKLSSLDIEAAHLSGNISYAEEQRIYYDLQSPRPKMKLLYVTPEKISSSGRFQNVLSG 788
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H +L+ IDEAHC S WGHDFRPDYK L +L+ QFP +P+MALTATA +V+ D++
Sbjct: 789 LHAMKQLARFVIDEAHCVSAWGHDFRPDYKKLSVLREQFPSIPIMALTATANPRVRVDVI 848
Query: 267 EMLHIRKCIK-FVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L ++ K F+ + NRPNL Y+VR K V EI I++ YP + SGIVYC ++
Sbjct: 849 KQLRLKSDTKWFLCSFNRPNLKYIVRPKQGVA--TKQEIIDLIKKKYPRA-SGIVYCLAK 905
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+C+Q+A E++ GISA YHA + + RE W +K +V+ T+AFGMGI+KPDVR
Sbjct: 906 KDCDQLAAEMKSAGISAKSYHAGLSDSQRESTQKDWIADKTKVVCATIAFGMGIDKPDVR 965
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------G 437
+VIHHS+ KS+E YYQE+GRAGRDG S C+L++ +D+ R M+ +++S
Sbjct: 966 YVIHHSIPKSIEGYYQEAGRAGRDGDFSTCILYYNYSDMLRFRKMMDFDSSIPFEAKKVH 1025
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC 474
+ NL+ +V Y + N+ R + QQ+N F
Sbjct: 1026 VNNLFRMVDYCE-----NVTDCR-----RSQQLNYFA 1052
>gi|170042287|ref|XP_001848863.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
gi|167865792|gb|EDS29175.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
Length = 1437
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/431 (44%), Positives = 271/431 (62%), Gaps = 29/431 (6%)
Query: 60 GSSSTAVENWSGTFEWDS----RADDVRL---NVFGIPAYRANQQEIINAVLSGRDVLVI 112
G+ + V N T E+D +D +++ FG+ ++R NQ ++INA L G D V+
Sbjct: 658 GNFHSGVRNDGLTGEFDGMKYPHSDTLQIVFRETFGLRSFRPNQLQVINATLLGHDCFVL 717
Query: 113 MAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKF 172
M GGGKSLCYQLPA++ EG+ +VVSPL SLI DQV L +L IPA L+ S D++
Sbjct: 718 MPTGGGKSLCYQLPAIMTEGVTIVVSPLKSLIHDQVNKLGSLDIPAAHLSGEVSYADQQK 777
Query: 173 IYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFR 232
IY L + LK+LYVTPEKIS S RF + L + + +L IDEAHC S WGHDFR
Sbjct: 778 IYADLSSPKPVLKLLYVTPEKISSSGRFQNILTELYRMKQLGRFVIDEAHCVSAWGHDFR 837
Query: 233 PDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIK-FVSTINRPNLFYMVR 291
PDYK L +L+ QFP +P+MALTATA +V+ D+++ L + + K F+ + NRPNL Y++R
Sbjct: 838 PDYKKLSVLREQFPTIPVMALTATANPRVRIDVLKQLGLGRNTKWFLCSFNRPNLKYIIR 897
Query: 292 EKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDI 351
K V EI + I++ +P + +GIVYC S+K+C+Q++ E+R GI A YHA +
Sbjct: 898 PKQGVATKA--EIMELIKKKFPRA-TGIVYCLSKKDCDQLSAEMRCAGIKAKSYHAGLGD 954
Query: 352 NAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGL 411
RE W +K++V+ T+AFGMGI+KPDVR+VIHHS+ KS+E YYQE+GRAGRDG
Sbjct: 955 AEREATQKDWITDKIKVVCATIAFGMGIDKPDVRYVIHHSMPKSIEGYYQEAGRAGRDGE 1014
Query: 412 PSECLLFFRPADVPRQSSMVFYENS--------GLQNLYDIVRYSQYPLHWNIEKVRLVI 463
+ C+LF+ +D+ R M+ +++S L NL+ +V Y + N+ R
Sbjct: 1015 LATCVLFYNYSDMLRYRKMMDHDSSIPFEAKQVHLHNLFRMVNYCE-----NVADCR--- 1066
Query: 464 FEKLQQVNLFC 474
+ QQ++ F
Sbjct: 1067 --RTQQLDYFA 1075
>gi|340522439|gb|EGR52672.1| hypothetical protein TRIREDRAFT_102458 [Trichoderma reesei QM6a]
Length = 1690
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/356 (50%), Positives = 239/356 (67%), Gaps = 8/356 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E INA L+G D V+M GGGKSLCYQLPAV++
Sbjct: 792 WSADVQKTLKDRFRMKGFRQNQLEAINATLAGDDAFVLMPTGGGKSLCYQLPAVVKSGKT 851
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLY 188
G+ +VVSPLLSL+QDQV + ALGI A S S E ++ + A ++ E +++LY
Sbjct: 852 RGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNSECSPEYKRQVMSAFDERNPEHFIELLY 911
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE SKS +FM+ L+ + + + I IDEAHC SQWGHDFRPDYK LG L+ +FP V
Sbjct: 912 VTPEMASKSPQFMNALQNLYRNKKFARIVIDEAHCVSQWGHDFRPDYKTLGQLRAKFPQV 971
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATATQ V D+ L ++ C F + NRPNL+Y VR K S VV +IA I
Sbjct: 972 PVMALTATATQNVIVDIKHNLRMKNCQVFSQSFNRPNLYYEVRPKGS-NPVVTQQIAALI 1030
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ YPN +GI+Y SRK+ E VAQ+L + GI+A +YHA + + + +V W K +++V
Sbjct: 1031 KAKYPNV-TGIIYTISRKQAEDVAQKLCEHGITARHYHAQITPSEKVEVQTAWQKGQIKV 1089
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V T+AFGMGI+KPDVR+VIHH + KS+E YYQE+GRAGRDG PS+C+LF+ D+
Sbjct: 1090 VVATIAFGMGIDKPDVRYVIHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKGDI 1145
>gi|343425568|emb|CBQ69103.1| related to RecQ family helicase RecQL1 [Sporisorium reilianum SRZ2]
Length = 791
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/485 (40%), Positives = 280/485 (57%), Gaps = 48/485 (9%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVDRQDQLY-ERQSELKSLLEAFEASRGSPIQYGGSS 62
EE+ +LE ++AEV V QI +L +D L ER+ L+ +Q GS+
Sbjct: 42 EEVAAKLEELDAEVESVHSQIAELQKLKDSLVRERRKVYTGYLKT--------LQQDGSA 93
Query: 63 ST---AVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
S+ + + +F W L+VFGIP++R Q+ +INA + RD +V+M GGGK
Sbjct: 94 SSRKLGADYTAASFSWSDTIRLAALSVFGIPSFRFCQEAVINAAMDRRDAVVVMPTGGGK 153
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SLCYQLPA+L G+ LVVSPL+SL+ DQV+ L +GI + +L +TS+ED I K +
Sbjct: 154 SLCYQLPAILTPGVTLVVSPLISLMTDQVLHLQEVGIESQLLCGSTSREDSNAILKQIRL 213
Query: 180 GEGE---------------------LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISI 218
G +K+LYVTPE+I+KSK +S L+ + GRLS I I
Sbjct: 214 GTASDDRSFSSKSGDASWNQHQNDGIKLLYVTPERIAKSKTCLSALQSAYEQGRLSRIVI 273
Query: 219 DEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHI------- 271
DEAHCCSQ GHD+RPDY L +L FP P+M LTAT KV +++E++ +
Sbjct: 274 DEAHCCSQMGHDYRPDYAKLSLLCRLFPKTPVMCLTATCGPKVLREIIEIMGLHAVTEPD 333
Query: 272 ----RKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKE 327
++ I F + + RPNL Y V ++ + + YI + + SGIVYC S+ +
Sbjct: 334 NAAPKRTIYFTAPLFRPNLLYQVVQRPQQANAAAEAMVDYILQHHAG-HSGIVYCLSQAD 392
Query: 328 CEQVAQ---ELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
E A E+ I YHA +D +++ +H W ++QV+ T+AFGMGI+KPDV
Sbjct: 393 TEATATSLTEISNGRIKTGRYHAGLDDQSKQAIHTDWRTGRIQVVCATIAFGMGIDKPDV 452
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDI 444
RFVIH +SKS++ YYQE+GRAGRDG S+C+LF+RP D R SS+V E +G + L +
Sbjct: 453 RFVIHACISKSLDGYYQETGRAGRDGQNSDCVLFYRPQDAIRMSSLVAGEPTGQEKLSAM 512
Query: 445 VRYSQ 449
+ Y+Q
Sbjct: 513 LEYAQ 517
>gi|357445423|ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
gi|355482037|gb|AES63240.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
Length = 1156
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/349 (50%), Positives = 240/349 (68%), Gaps = 5/349 (1%)
Query: 69 WSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS F W + VFG ++R NQ+E+INA +SG DV V+M GGGKSL YQLPA
Sbjct: 385 WSSRDFSWTKELEVNNKKVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPA 444
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ GI LV+SPL+SLIQDQ+M L IPA L++ +++ I + L + K+L
Sbjct: 445 LINPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANLEWAEQQEILRELNSDYCKYKLL 504
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK+++S + +LE H LS I IDEAHC SQWGHDFRPDY+ LG+LK +FP+
Sbjct: 505 YVTPEKVARSDVLLRQLESLHGRELLSRIVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPN 564
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P++ALTATAT V+ D+++ L + C+ F + NRPNL+Y V K+ K +++I K+
Sbjct: 565 TPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT---KKCLEDIDKF 621
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ + E GI+YC SR +CE+VA++L++ G +YH MD + R V +WSK+++
Sbjct: 622 IRENHFD-ECGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPDQRAHVQRQWSKDEIN 680
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECL 416
+I TVAFGMGINKPDVRFVIHHSL KSVE Y+QE GRAGRDG S C+
Sbjct: 681 IICATVAFGMGINKPDVRFVIHHSLPKSVEGYHQECGRAGRDGQRSSCI 729
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 574 SSALEFELDELRKELASISG-GILPHSVLSSQLIRLISARKPSTMEEASSNHLEKI--IG 630
S+ L L LR L +G G++ H + + ++ IS + P T EE L I I
Sbjct: 976 SAKLYTALRMLRTTLCREAGEGVMAHHIFGNATLQQISKKLPRTKEE-----LLDINGIS 1030
Query: 631 KLKTGKYGSRILEVISKCGNSEQQHDNNA 659
K K KYG R+LE I+K N D N+
Sbjct: 1031 KTKVSKYGDRLLETIAKTINEYYNTDKNS 1059
>gi|71406960|ref|XP_805980.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma cruzi strain CL
Brener]
gi|70869587|gb|EAN84129.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1451
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/449 (43%), Positives = 266/449 (59%), Gaps = 31/449 (6%)
Query: 33 QLYERQS-ELKSLLEAFEASRGSPIQYGGSSSTAVENWSG-TFEWDSRADDVRLNVFGIP 90
+ YE++S L+ AS P+ Y V +SG F W + ++VFG+
Sbjct: 332 ETYEQESSHLQQRSSPTRASAELPVNY-------VNRYSGENFSWSADLRRTMIDVFGLH 384
Query: 91 AYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG--IALVVSPLLSLIQDQV 148
YR Q EI+NA + GRD V++ GGGKSLCYQLPA++ + +V+SPL+SLIQDQV
Sbjct: 385 QYRFLQLEIMNACMDGRDAFVLLPTGGGKSLCYQLPALMPNPAQVTIVISPLISLIQDQV 444
Query: 149 MCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCH 208
L A IPA LT TS + ++ G ++YVTPE +S F+ L
Sbjct: 445 YALIANDIPAIALTGQTSDAPRRALFAEWASGRIVHTLVYVTPEYFGRSDHFVQCLVHLA 504
Query: 209 HAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEM 268
G LS +DEAHC SQWGHDFRPDY+ L ILK FP +P+ ALTATAT VQ D++
Sbjct: 505 SRGLLSRFVVDEAHCVSQWGHDFRPDYRKLAILKQHFPAIPISALTATATDMVQQDIIST 564
Query: 269 LHIRKCIKFVSTINRPNLFYMVRE-KSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKE 327
L ++ + F + NR NL Y VR+ SVG+VV+D I+ +P GIVYC SRK+
Sbjct: 565 LRLQDALVFKGSFNRQNLSYSVRKVGRSVGQVVVD----LIKHRFPPRSCGIVYCLSRKD 620
Query: 328 CEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFV 387
CE +A EL GI A YYHA+ + + + RW+K++LQVI T+AFGMGINKPDVRFV
Sbjct: 621 CENMAAELVGAGIRASYYHAEA--SGKNEKQERWTKDELQVICATIAFGMGINKPDVRFV 678
Query: 388 IHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYEN---SGLQNLYDI 444
IH ++ KS+E YYQESGRAGRDGL SEC+L P+D R M++ N + + +LY +
Sbjct: 679 IHAAMPKSIEGYYQESGRAGRDGLLSECILLCSPSDKQRHEQMIYGSNDWKTSMSSLYRM 738
Query: 445 VRYSQYPLHWNIEKVRLVIFEKLQQVNLF 473
+ Y+ +H ++QQ+ F
Sbjct: 739 LAYTMNDVHCR----------RMQQLGYF 757
>gi|58266374|ref|XP_570343.1| ATP-dependent DNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226576|gb|AAW43036.1| ATP-dependent DNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 876
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/414 (45%), Positives = 266/414 (64%), Gaps = 21/414 (5%)
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+++ ++ S F + S N F + +R Q+ +INA + RD++ +M GGGKS
Sbjct: 114 TAANTIDYQSSCFPFSSAIAATLRNTFNLNKFRLCQEGVINAAVDDRDIVCVMPTGGGKS 173
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
L YQLPAV+ G+ +VVSPLL+LI DQV L +GI MLT +TS +++ IYK L G
Sbjct: 174 LTYQLPAVMGRGLTVVVSPLLALIWDQVRALKEIGIECVMLTGSTSTQEQNEIYKRLRDG 233
Query: 181 ----EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236
E E+++ YVTPEK+SKSKRFMS LEK + +GRL IDEAHCCSQ GHDFRPDYK
Sbjct: 234 PSHGEKEIRLCYVTPEKVSKSKRFMSVLEKMNQSGRLRRFVIDEAHCCSQLGHDFRPDYK 293
Query: 237 NLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKC----IKFVSTINRPNLFYMVRE 292
L +LKT FP VP+ A+TAT + K DL+++L + I F S + RPNL Y V
Sbjct: 294 KLSMLKTLFPRVPIQAVTATLSSKTLPDLLKILRLGPITDGRIFFSSPLFRPNLHYKVLP 353
Query: 293 KSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDIN 352
K+S K I E+ ++IQ+ +P ESGIVYC S+K+ E VA+EL +G S YHA +D
Sbjct: 354 KASNAKTAIAEMGRWIQDKHPG-ESGIVYCLSKKDAETVAEEL--KGWSNGVYHAGIDDT 410
Query: 353 AREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLP 412
+E +H++W + K+ I T+AFG+GI+K DVR+ +SKS+E YYQE+GRAGRDG
Sbjct: 411 EKETIHVKWREGKINCICATIAFGLGIDKGDVRY-----MSKSLEGYYQETGRAGRDGKD 465
Query: 413 SECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEK 466
S+C+LF+R D R + +++ + G L++++R++Q ++ R V F K
Sbjct: 466 SDCVLFYRGQDATRLAGLIYTDVDGTGKLHEMLRFAQ-----DLRTCRKVAFAK 514
>gi|119480183|ref|XP_001260120.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
gi|119408274|gb|EAW18223.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
Length = 1564
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 245/372 (65%), Gaps = 9/372 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W +V + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP+++
Sbjct: 718 WTKDVKNVLRDRFHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVTSGST 777
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
G+ +VVSPLLSL+QDQV L L I A +L T +E+ ++I + L E ++++LY
Sbjct: 778 RGVTIVVSPLLSLMQDQVSHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELLY 837
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++KS+ + LEK + RL+ I IDEAHC SQWGHDFRPDYK LG ++ Q P V
Sbjct: 838 ITPEMVNKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPGV 897
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR+K+ + V++ IA I
Sbjct: 898 PMMALTATATENVKVDVIHNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAE-VLENIADII 956
Query: 309 QESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SYPN +SGI+YC SRK CE VA+ L Q I A+YYHA MD + R +V W ++
Sbjct: 957 KTSYPN-KSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVH 1015
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L++ D
Sbjct: 1016 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSI 1075
Query: 428 SSMVFYENSGLQ 439
SM+ G Q
Sbjct: 1076 MSMIDKGEGGKQ 1087
>gi|194901954|ref|XP_001980516.1| GG17198 [Drosophila erecta]
gi|190652219|gb|EDV49474.1| GG17198 [Drosophila erecta]
Length = 1457
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 203/499 (40%), Positives = 290/499 (58%), Gaps = 61/499 (12%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 703 FGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 762
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ LA+L I A L+ D IY+ LE +K+LYVTPEKIS S RF L+
Sbjct: 763 QINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKISSSARFQDTLDT 822
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +S IDEAHC SQWGHDFRPDYK LG+LK +FP+VP +ALTATAT +V+ D++
Sbjct: 823 LNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPTIALTATATPRVRLDIL 882
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L+++ C F+S+ NR NL Y V K G +D+I++YI+ S P SGI+YC SRK
Sbjct: 883 AQLNLKNCKWFLSSFNRSNLRYRVLPKK--GASTLDDISRYIR-SKPAHFSGIIYCLSRK 939
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC++ ++ + + G+ A YHA + RE W K++VI T+AFGMGI+KPDVRF
Sbjct: 940 ECDETSKRMCKDGVRAVAYHAGLTDTEREGRQKDWLTGKIRVICATIAFGMGIDKPDVRF 999
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E YYQE+GRAGRDG ++C+L++ AD+ R M+ + + +
Sbjct: 1000 VLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYADMLRIKKMMDSDKALQYNVKKIHV 1059
Query: 439 QNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF--------CM--------------- 475
NLY IV Y + N+ R + QQ++ F C+
Sbjct: 1060 DNLYRIVGYCE-----NLTDCR-----RAQQLDYFGEHFTSEQCLANKETACDNCLNKRA 1109
Query: 476 ---VVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEIDS-------------D 518
V HA+ ++D+ R T+L + D +K K+K+I D
Sbjct: 1110 YRAVDALEHARKAARAVKDLCSGRSRFTLLHIADVLKGSKIKKIIDYNHHKTPHHGVLKD 1169
Query: 519 LKREEIEQLVLQLIIDRVL 537
+ ++ +L+ +++ID L
Sbjct: 1170 WDKNDVHRLLRKMVIDGFL 1188
>gi|334183459|ref|NP_176289.7| RECQ helicase L4B [Arabidopsis thaliana]
gi|75334305|sp|Q9FT70.1|RQL4B_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4B; AltName:
Full=RecQ-like protein 4B; Short=AtRecQ4B;
Short=AtRecQl4B
gi|11121451|emb|CAC14869.1| DNA Helicase [Arabidopsis thaliana]
gi|332195628|gb|AEE33749.1| RECQ helicase L4B [Arabidopsis thaliana]
Length = 1150
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/418 (45%), Positives = 267/418 (63%), Gaps = 10/418 (2%)
Query: 20 VQEQIKQLVDR----QDQLYERQS-ELKSLLEAFEASRGSPIQYGGSSSTAVENWSGT-F 73
V+EQ + + D +D L ++ ++ S E E S I + S+ + W+ + F
Sbjct: 392 VKEQGRCVTDNWNMPRDYLVSKERYDISSGSEEREQSVSEVIDVTDTESSNDKKWTSSDF 451
Query: 74 EWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGI 133
W + VFG ++R NQ+EIINA +SG DV V+M GGGKSL YQLPA+L GI
Sbjct: 452 PWTKNLEVYNKLVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALLCAGI 511
Query: 134 ALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEK 193
LV+SPL+SLIQDQ+M L I A L++ ++ I + L + + K+LYVTPEK
Sbjct: 512 TLVISPLVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEK 571
Query: 194 ISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMAL 253
++KS+ + LE + L+ IDEAHC SQWGHDFRPDY+ LG+LK +FP++PM+AL
Sbjct: 572 VAKSESLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLAL 631
Query: 254 TATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYP 313
TATAT V+ D+++ L + C+ F + NRPNL+Y V K++ +++I K+I+E++
Sbjct: 632 TATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTN---KCLEDIDKFIRENHF 688
Query: 314 NSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTV 373
+ E GI+YC SR +CE+V + LR G A +YH MD R V +WSK+++ +I TV
Sbjct: 689 D-ECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATV 747
Query: 374 AFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
AFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ D R M+
Sbjct: 748 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMI 805
>gi|407860729|gb|EKG07462.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1310
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/416 (45%), Positives = 254/416 (61%), Gaps = 23/416 (5%)
Query: 65 AVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
+V +SG F W + ++VFG+ YR Q EI+NA + GRD V++ GGGKSLCY
Sbjct: 213 SVNRYSGENFSWSADLRRTMIDVFGLHQYRFLQLEIMNACMDGRDAFVLLPTGGGKSLCY 272
Query: 124 QLPAVLREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
QLPA++ + +V+SPL+SLIQDQV L A IPA LT TS + ++ G
Sbjct: 273 QLPALMPNPAQVTIVISPLISLIQDQVYALIANDIPAIALTGQTSDAPRRALFAEWASGR 332
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
++YVTPE +S F+ L G LS +DEAHC SQWGHDFRPDY+ L IL
Sbjct: 333 IVHTLVYVTPEYFGRSDHFVQCLVHLASRGLLSRFVVDEAHCVSQWGHDFRPDYRKLAIL 392
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVRE-KSSVGKVV 300
K FP +P+ ALTATAT VQ D++ L ++ + F + NR NL Y VR+ SVG+VV
Sbjct: 393 KQHFPAIPISALTATATDMVQQDIITTLRLQDALVFKGSFNRQNLSYSVRKVGRSVGQVV 452
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+D I+ +P GIVYC SRK+CE +A EL GI A YYHA+ + + + R
Sbjct: 453 VD----LIKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHAEA--SGKNEKQER 506
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W+K++LQVI T+AFGMGINKPDVRFVIH ++ KS+E YYQESGRAGRDGL SEC+L
Sbjct: 507 WTKDELQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLLSECILLCS 566
Query: 421 PADVPRQSSMVFYEN---SGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF 473
P+D R M++ N + + +LY +V Y+ +H ++QQ+ F
Sbjct: 567 PSDKQRHEQMIYGSNDWKTSMSSLYRMVAYTMNDVHC----------RRMQQLGYF 612
>gi|146322807|ref|XP_749627.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
gi|129556812|gb|EAL87589.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
Length = 1563
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 245/372 (65%), Gaps = 9/372 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W +V + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP+++
Sbjct: 716 WTKDVKNVLRDRFHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVTSGST 775
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
G+ +VVSPLLSL+QDQV L L I A +L T +E+ ++I + L E ++++LY
Sbjct: 776 RGVTIVVSPLLSLMQDQVSHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELLY 835
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++KS+ + LEK + RL+ I IDEAHC SQWGHDFRPDYK LG ++ Q P V
Sbjct: 836 ITPEMVNKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPGV 895
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR+K+ + V++ IA I
Sbjct: 896 PMMALTATATENVKVDVIHNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAE-VLENIADII 954
Query: 309 QESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SYPN +SGI+YC SRK CE VA+ L Q I A+YYHA MD + R +V W ++
Sbjct: 955 KTSYPN-KSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVH 1013
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L++ D
Sbjct: 1014 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSI 1073
Query: 428 SSMVFYENSGLQ 439
SM+ G Q
Sbjct: 1074 MSMIDKGEGGKQ 1085
>gi|242063976|ref|XP_002453277.1| hypothetical protein SORBIDRAFT_04g003070 [Sorghum bicolor]
gi|241933108|gb|EES06253.1| hypothetical protein SORBIDRAFT_04g003070 [Sorghum bicolor]
Length = 1154
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 244/678 (35%), Positives = 353/678 (52%), Gaps = 86/678 (12%)
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS T F W + N FG ++R NQ+EIINA +SG DV V+M GGGKSL YQLPA
Sbjct: 418 WSSTNFPWTKDLEAKNRNKFGNRSFRPNQREIINATMSGYDVFVLMPTGGGKSLTYQLPA 477
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ G+ LVV PL+SLIQDQ+M L+ IPA L+ +++ I + L+ K+L
Sbjct: 478 LISVGLTLVVCPLVSLIQDQIMHLSQANIPATYLSGNLDWSEQQEIMRDLK--SCRYKLL 535
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEKI++S L G LS I IDEAHC SQWGHDFRPDYK LG+LK FP
Sbjct: 536 YVTPEKIARSGALSGLLRDLDSQGHLSRIVIDEAHCVSQWGHDFRPDYKELGVLKQNFPK 595
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
P++ALTATAT +V+ D+++ L + CI F + NRPNL Y +R K+ K +++I +
Sbjct: 596 TPVLALTATATARVKEDVVQALALENCIVFKQSFNRPNLRYYLRPKT---KKCVEDIDMF 652
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+E++ E GI+YC SR +CE+V+++LR+ G + +YH MD R ++ WSK+K+
Sbjct: 653 IRENH-YKECGIIYCLSRMDCEKVSEKLRECGHTVAHYHGSMDPVNRTRIQEDWSKDKIN 711
Query: 368 VIVGTVAFGM-------------------------GINKPDVRFVIHHSLSKSVETYYQE 402
+I T+AFGM GINKPDVRFVIHHSL KS+E Y+QE
Sbjct: 712 IICATIAFGMGNLIFQTPVYVTSIIGCSILIGQTVGINKPDVRFVIHHSLPKSIEGYHQE 771
Query: 403 SGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS-GLQNLYDIVRYSQY----------- 450
GRAGRDG PS CLL+++ +D + + EN + L ++ + +
Sbjct: 772 CGRAGRDGQPSSCLLYYQYSDY-----VSYCENDVDCRRLLQLIHFGERFDPSLCAKTCD 826
Query: 451 ----PLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD 506
W +EK I +L V+L V + GH+ +L+ R ++ Q V
Sbjct: 827 NCLKESGW-VEKDVTNIARQL--VDL---VTMTGHSNSSTHILEVY-----RGSVSQNVK 875
Query: 507 KMK---IKLKEIDSDLKREEIEQLVLQLIIDRVLVR------IGPFSPGK--KIIKLEIS 555
K + + L L + E +++ L+ + +L+ + P +PGK K+ L+ S
Sbjct: 876 KQRHDALPLHGAGKHLAKGEAARIMRHLVTEEILIEDVKKSDMFP-APGKASKMGNLDTS 934
Query: 556 SVQK--NTADNKKSTKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARK 613
+ T + L S E L R+ + S G + + + ++ +S R
Sbjct: 935 LFPQINKTVQQQSEVDEKLASILYEALLTLRRQIMEECSEGCHAYHIFKTDTLKEMSIRV 994
Query: 614 PSTMEEASSNHLEKI--IGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRDARA 671
P T EE L I IGK K KYG R+L I S+ + +S + A
Sbjct: 995 PRTKEE-----LLDINGIGKTKLKKYGDRVLATIEDFL-SKHPNPRRNISGSGGKEHSEA 1048
Query: 672 SKRTKKEKAVVVVDSSDD 689
+K+ + A V DD
Sbjct: 1049 AKKRRGSTASSAVSCGDD 1066
>gi|159129033|gb|EDP54147.1| RecQ family helicase MusN [Aspergillus fumigatus A1163]
Length = 1563
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 245/372 (65%), Gaps = 9/372 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W +V + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP+++
Sbjct: 716 WTKDVKNVLRDRFHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVTSGST 775
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
G+ +VVSPLLSL+QDQV L L I A +L T +E+ ++I + L E ++++LY
Sbjct: 776 RGVTIVVSPLLSLMQDQVSHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELLY 835
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++KS+ + LEK + RL+ I IDEAHC SQWGHDFRPDYK LG ++ Q P V
Sbjct: 836 ITPEMVNKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPGV 895
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR+K+ + V++ IA I
Sbjct: 896 PMMALTATATENVKVDVIHNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAE-VLENIADII 954
Query: 309 QESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SYPN +SGI+YC SRK CE VA+ L Q I A+YYHA MD + R +V W ++
Sbjct: 955 KTSYPN-KSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVH 1013
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L++ D
Sbjct: 1014 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSI 1073
Query: 428 SSMVFYENSGLQ 439
SM+ G Q
Sbjct: 1074 MSMIDKGEGGKQ 1085
>gi|328865354|gb|EGG13740.1| hypothetical protein DFA_11501 [Dictyostelium fasciculatum]
Length = 1329
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 179/404 (44%), Positives = 256/404 (63%), Gaps = 30/404 (7%)
Query: 58 YGGSSSTAV-----------ENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSG 106
Y G +S AV +S F W A + +FG ++R NQ EIINA + G
Sbjct: 580 YKGDNSPAVLIPVPIQETDNSKFSAKFPWTDEARRINSELFGNASFRHNQLEIINAAMDG 639
Query: 107 RDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTS 166
DV V+M GGGKSLCYQ+PA + +G+ +++SPL+SLIQDQV L +G A LTS T
Sbjct: 640 NDVFVLMPTGGGKSLCYQIPAYMNQGLTVIISPLISLIQDQVTFLKGMGYMARSLTSATD 699
Query: 167 KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQ 226
++++ IY ++ + + K+LY+TPE+I + + M + + + IDEAHC SQ
Sbjct: 700 ADEKREIYADIKSTDPQTKLLYLTPERIVQDQGMMGIFSNLYSRQMFARVIIDEAHCVSQ 759
Query: 227 WGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNL 286
WGHDFRPDYK L +LK+ FP +P++ALTATAT++V+ D++ L +R + F + NRPNL
Sbjct: 760 WGHDFRPDYKELSVLKSNFPRLPILALTATATERVKADVIANLGMRSSVCFKQSFNRPNL 819
Query: 287 FYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYH 346
+ V +K+ K VI+ IA +I+++YP S SGIVYC LR +S+D+YH
Sbjct: 820 TFAVMKKT---KEVIESIASFIKKTYPKS-SGIVYC------------LR---LSSDFYH 860
Query: 347 ADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRA 406
MD R++V RW+++++++I T+AFGMGINKPDVRFVIHHSL K++E YYQESGRA
Sbjct: 861 GSMDAGDRQRVQERWTRDRVKIICSTIAFGMGINKPDVRFVIHHSLPKTLEGYYQESGRA 920
Query: 407 GRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQY 450
GRDG PS CLL++ D R ++ N+ +N ++ R Y
Sbjct: 921 GRDGKPSHCLLYYAYKDKFRYELLMQESNTPKENKENLGRVVAY 964
>gi|312066223|ref|XP_003136168.1| ATP-dependent DNA helicase [Loa loa]
Length = 590
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 208/532 (39%), Positives = 318/532 (59%), Gaps = 38/532 (7%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME ++ +ELE +E ++ ++++ + L++R+ Q+ +R ++
Sbjct: 13 MELSKLDEELERIEGDISSLRKRKRALLERKAQIEKR-----------------IVERNV 55
Query: 61 SSSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
+ ++ W S F+W V NVF + +R Q+ +INAVLS D LV+M+ G GK
Sbjct: 56 ENESSFRIWDSDDFQWMKECLHVLHNVFKLSDFRPLQRAVINAVLSKEDCLVVMSTGSGK 115
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SLCYQLPAV+ +GI LVVSPL++LI+DQ+ L LGI A L +T+KE+ + AL
Sbjct: 116 SLCYQLPAVIMKGIVLVVSPLIALIEDQLHQLRKLGIDAATLNQSTAKEEISRVQTALTD 175
Query: 180 GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
+ L++LYVTPEK++KSKR M++LEKC+ RL L+ A F +L
Sbjct: 176 SKAPLRLLYVTPEKLAKSKRIMNRLEKCNEMKRLKLMKYTAAL---NGDMIFGQILNSLI 232
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
+LK QF VP++ LTATAT V +D+ ML I + F + NRPNL Y V +K S
Sbjct: 233 VLKRQFQAVPLIGLTATATADVIDDVKNMLGIPAAVVFRAGFNRPNLHYSVCQKPSSDVE 292
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHM 359
+D + + I+ + SGI+YCFSRKECE++ + LR +G+ A +YHA +D + R H
Sbjct: 293 FVDILVELIKTRFAEL-SGIIYCFSRKECEELTKSLRAKGVKASHYHAFLDADKRNITHE 351
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+W + VIV T+AFGMGI+KPDVR+VIHHSL KS+E YYQESGR GRDG + C+LF+
Sbjct: 352 KWLNGGINVIVATIAFGMGIDKPDVRYVIHHSLPKSLENYYQESGRVGRDGNKAYCILFY 411
Query: 420 RPADVPRQSSMVFYENSGLQNLYDIVRY---------SQYPLHWNIE---KVRLVIFEKL 467
R D+ RQS+MV E +G++NLY ++ Y S H+N+E + + +
Sbjct: 412 RLNDLFRQSTMVCTEKTGVRNLYSVLSYCIQTSQCRRSVIAEHFNVEWNSSLCSKMCDIC 471
Query: 468 QQVNLFCMVVLAGHAQCIISLLQDIQ-DNNQRLTMLQLVDKMKIKLKEIDSD 518
Q N F V + + + ++ +L+++Q +N R+T ++LV+ + K+++S+
Sbjct: 472 SQTNDFECVDVTDYWRLMLEVLKNVQKTDNNRVTGMKLVE---LTWKKVNSE 520
>gi|195112008|ref|XP_002000568.1| GI22449 [Drosophila mojavensis]
gi|193917162|gb|EDW16029.1| GI22449 [Drosophila mojavensis]
Length = 1409
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 187/395 (47%), Positives = 258/395 (65%), Gaps = 21/395 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 646 FGLKSFRPNQLQVINAALLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 705
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L++L I A ++ S ++ IY+ LE +K+LYVTPEKIS S RF L++
Sbjct: 706 QVSKLSSLDICAKSISGDQSLDEVMTIYRDLESHPPLVKLLYVTPEKISSSPRFQDTLDQ 765
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +S IDEAHC SQWGHDFRPDYK LGIL+ +FP+VP MALTATAT +V+ D++
Sbjct: 766 LNANNYISRFVIDEAHCVSQWGHDFRPDYKKLGILRKRFPNVPTMALTATATPRVRQDIL 825
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
+ L++ C F+S+ NR NL Y V K V +D++ +IQ S P + SGI+YC SRK
Sbjct: 826 QQLNLTHCKWFLSSFNRRNLRYQVLPKKGVS--TLDDMRNFIQ-SRPATASGIIYCLSRK 882
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC++VA+++ GI A YHA + RE W NK++VI T+AFGMGI+KPDVRF
Sbjct: 883 ECDEVAKKMCAVGIRALSYHAGLTDVVRESRQKDWITNKVRVICATIAFGMGIDKPDVRF 942
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E YYQE+GRAGRDG ++C+L++ +D+ R M+ + + +
Sbjct: 943 VLHYSLPKSIEGYYQEAGRAGRDGEIADCILYYNYSDMQRLKKMMDADRALQYHVKKIHI 1002
Query: 439 QNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF 473
+NL IV Y + NI R + QQ++ F
Sbjct: 1003 ENLNRIVGYCE-----NITDCR-----RAQQLDYF 1027
>gi|195396248|ref|XP_002056744.1| GJ10048 [Drosophila virilis]
gi|194143453|gb|EDW59856.1| GJ10048 [Drosophila virilis]
Length = 1324
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 188/395 (47%), Positives = 257/395 (65%), Gaps = 21/395 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 564 FGLKSFRPNQLQVINAALLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 623
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV LA+L I A ++ + ++ IY+ LE +K+LYVTPEKIS S RF L++
Sbjct: 624 QVNKLASLDICAKSMSGEQTLDEVMTIYRDLECHPPLVKLLYVTPEKISSSARFQDTLDQ 683
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+S IDEAHC SQWGHDFRPDYK LGIL+ +FP+VP MALTATAT +V+ D++
Sbjct: 684 LSANNYISRFVIDEAHCVSQWGHDFRPDYKKLGILRKRFPNVPSMALTATATPRVRQDIL 743
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
+ L++ C F+S+ NR NL Y V K G +D+I +IQ + + SGI+YC SRK
Sbjct: 744 QQLNLTHCKWFLSSFNRSNLRYQVLPKK--GASTLDDIRSFIQ-TRAVTASGIIYCLSRK 800
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC++VAQ++ GI A YHA + ARE W NK++VI T+AFGMGI+KPDVRF
Sbjct: 801 ECDEVAQKMCAVGIRAVAYHAGLTDAARESRQKDWITNKVRVICATIAFGMGIDKPDVRF 860
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E YYQE+GRAGRDG ++C+L++ +D+ R M+ + + +
Sbjct: 861 VLHYSLPKSIEGYYQEAGRAGRDGEIADCILYYNYSDMLRLKKMMDADRALQYHVKKIHI 920
Query: 439 QNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF 473
NL+ IV Y + NI R + QQ++ F
Sbjct: 921 DNLHRIVGYCE-----NITDCR-----RAQQLDYF 945
>gi|291237646|ref|XP_002738744.1| PREDICTED: Bloom syndrome protein-like [Saccoglossus kowalevskii]
Length = 1050
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 199/457 (43%), Positives = 270/457 (59%), Gaps = 17/457 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
+FG+ +R NQ E INA L +D ++M GGGKSLCYQLP + +G+ LVVSPL SLIQ
Sbjct: 461 IFGLHKFRTNQLEAINAALLSKDCFILMPTGGGKSLCYQLPGSISKGLTLVVSPLKSLIQ 520
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L +P+ L+ S + + IY+ L + + +LK+LYVTPEKIS S + +S LE
Sbjct: 521 DQVQKLCLRDVPSAHLSGDASPNEVELIYRELSRRDPQLKLLYVTPEKISSSSKLVSTLE 580
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ G LS IDEAHC SQWGHDFRPDYK L L+ FP VP+MALTATAT +V+ D+
Sbjct: 581 NLYSRGMLSRFVIDEAHCVSQWGHDFRPDYKRLNKLRELFPTVPIMALTATATPRVRADI 640
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
++ L IR I F+ + NR NL Y + K KV D I IQ + ESGI+YC SR
Sbjct: 641 VKQLKIRSPIWFIQSFNRSNLKYSIYPKKP-SKVTQDCI-NLIQARFA-GESGIIYCLSR 697
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
ECE+VA EL GISA YHA ++ N+R W +++ +V+ T+AFGMGI+KPDVR
Sbjct: 698 NECEKVAAELSSAGISAKAYHAGLESNSRTYTQQAWVRDEYKVVCATIAFGMGIDKPDVR 757
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------L 438
FVIHHSL KS+E +YQESGRAGRDG + C+LF+ D+ R ++ EN +
Sbjct: 758 FVIHHSLPKSIEGFYQESGRAGRDGNIAHCILFYSYQDMTRLRKVMERENDNFEAIRVHI 817
Query: 439 QNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQR 498
+NL +V+Y + ++ + EK+ +L +V C + I+ N +
Sbjct: 818 ENLQRMVQYCENETDCRRSQLLEYLGEKVISYDLCSGIVSTACDNCANKIKLKIRSGNNK 877
Query: 499 LTMLQLVD----KMKIK---LKEIDSDLKREEIEQLV 528
+V K IK LKE+ +R E +
Sbjct: 878 TKKCAVVQCAATKKNIKEQLLKELQDTCRRLGRENFI 914
>gi|115399192|ref|XP_001215185.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192068|gb|EAU33768.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1367
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 302/518 (58%), Gaps = 45/518 (8%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W V + F + +R NQ E I+A LSG+D ++M GGGKSLCYQLP+V+
Sbjct: 686 WSKEVRTVLKDRFHLRGFRMNQLEAIDATLSGKDAFILMPTGGGKSLCYQLPSVVTSGAT 745
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK--GEGELKMLY 188
G+ +VVSPLLSL+QDQV L L I A++L T KE+ ++I + L E E+++LY
Sbjct: 746 RGVTIVVSPLLSLMQDQVSQLRKLHIKAYLLNGETPKEERQWIMRTLSGYGAEDEIELLY 805
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++K++ ++ LEK + RL+ I IDEAHC SQWGHDFRPDYK LG L++Q P V
Sbjct: 806 ITPEMLTKNQTLVNSLEKLNRKSRLARIVIDEAHCVSQWGHDFRPDYKELGNLRSQLPGV 865
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L ++ C F + NRPNL Y VR K S +++ IA I
Sbjct: 866 PMMALTATATENVKVDVLHNLQMQGCELFSQSFNRPNLTYEVRPKPSKNELLA-SIANII 924
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
YPN +SGI+YC SR CE+VA+ LR+ GI A++YHA M + R +V W +
Sbjct: 925 TTKYPN-QSGIIYCLSRDSCEKVAKSLREDYGIKAEHYHAGMKPDERNQVQHGWQAGRSH 983
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV T+AFGMGI+KPDVR+VIHHSL KS+E YYQE+GRAGRDG S C +++ D
Sbjct: 984 VIVATIAFGMGIDKPDVRYVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYYCYKDAMTI 1043
Query: 428 SSMVFYENSGLQN-------LYDIVRYSQYPLHWNIEKVRLVIF--------------EK 466
+ M+ Q L+++V+Y + + +V+++ + +
Sbjct: 1044 TRMIDRGEGSKQQKSRQRQMLHNVVQYCEN--KSDCRRVQILAYFNEYFRREDCNSSCDN 1101
Query: 467 LQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKRE---- 522
+ ++F + + HA IS+++ Q+ +++T+ V+ + +K S R+
Sbjct: 1102 CKSDSVFELHDFSRHAASAISVVRYFQELGEKVTLSYCVNIYRGSVKRFRSTEHRQATGY 1161
Query: 523 ---------EIEQLVLQLIIDRVLVRIGPFSPGKKIIK 551
E E+L +L+ + LV + GK ++
Sbjct: 1162 GDGSSLEMGEAERLFHRLLGEGALVEDNVVTTGKFAVQ 1199
>gi|194744401|ref|XP_001954683.1| GF16620 [Drosophila ananassae]
gi|190627720|gb|EDV43244.1| GF16620 [Drosophila ananassae]
Length = 1512
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/489 (41%), Positives = 286/489 (58%), Gaps = 41/489 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 685 FGLKSFRPNQLQVINASLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 744
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q LA+L I A L+ D IY+ LE +K+LYVTPEKIS S RF L+
Sbjct: 745 QTNKLASLDICAKSLSGEQKLADAMAIYRDLEAQPPMVKLLYVTPEKISSSARFQDTLDT 804
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +S IDEAHC SQWGHDFRPDYK LGILK +FP+VP +ALTATAT +V+ D++
Sbjct: 805 LNANNYISRFVIDEAHCVSQWGHDFRPDYKKLGILKKRFPNVPTIALTATATPRVRLDIL 864
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L+++ C F+S+ NR NL Y V K G +D+I+ YI+ S P SGI+YC SRK
Sbjct: 865 AQLNLKHCKWFLSSFNRSNLRYKVMPKK--GASTLDDISGYIR-SKPAHSSGIIYCLSRK 921
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC+ VA+++ + G+ A YHA + N RE W KL+VI T+AFGMGI+KPDVRF
Sbjct: 922 ECDDVAKKMCKDGVRAVAYHAGLTDNERETRQKDWLTGKLRVICATIAFGMGIDKPDVRF 981
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E +YQE+GRAGRDG ++C+L++ AD+ R M+ + + +
Sbjct: 982 VLHYSLPKSIEGFYQEAGRAGRDGEVADCILYYNYADMLRIKKMLDADKALQYNVKKMHI 1041
Query: 439 QNLYDIVRYSQ-------------YPLHWNIEKV---RLVIFEKLQQVNLFCMVVLAGHA 482
NL IV Y + + H+ E+ R + + V A
Sbjct: 1042 DNLNRIVGYCENLMDCRRAQQLDYFGEHFTSEQCLENRQTACDNCINKKAYRSVDALEFA 1101
Query: 483 QCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEIDS-------------DLKREEIEQLV 528
+ ++D+ R T+L + D +K K+K+I D + +I++L+
Sbjct: 1102 RKAARCVKDLCSGRSRFTLLHIADVLKGSKIKKIVDFNHHNSPHHGALKDWDKNDIQRLL 1161
Query: 529 LQLIIDRVL 537
++IID L
Sbjct: 1162 RKMIIDGFL 1170
>gi|189200787|ref|XP_001936730.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983829|gb|EDU49317.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1420
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/358 (50%), Positives = 237/358 (66%), Gaps = 11/358 (3%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL--- 129
F W L+ FG+ +R Q E IN LSG V+M GGGKSLCYQLP+V+
Sbjct: 501 FPWSQDLRTALLHRFGLRGFRPGQLEAINTTLSGDHCFVLMPTGGGKSLCYQLPSVIASG 560
Query: 130 -REGIALVVSPLLSLIQDQV-MCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LK 185
G+ +VVSPLLSL++DQV C G+ A ++ ++ + I AL + + + ++
Sbjct: 561 KTRGVTIVVSPLLSLMEDQVDACRNRFGMQAFLINGESTAAQKNMIMDALRQRDPQQFIQ 620
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPE +SK++R +S ++ H G L+ I IDEAHC SQWGHDFRPDYK LG + QF
Sbjct: 621 ILYVTPEMLSKNQRMISAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKALGDVVRQF 680
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP++ALTATATQ V+ D++ L I+ C ++ + NRPNL Y V K G+ VID IA
Sbjct: 681 PGVPVIALTATATQLVRTDVVANLGIQGCRQYSQSFNRPNLSYEVLPK---GRGVIDSIA 737
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
I+E Y +SGI+YC SRK CEQVAQ+L + GI A +YHA MD R V +W KN+
Sbjct: 738 DLIKEKY-TGKSGIIYCLSRKTCEQVAQKLSETGIRAYHYHAGMDSADRSDVQRKWQKNE 796
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
VIV T+AFGMGI+K DVR+VIHHSL KS+E YYQE+GRAGRDG SEC L++ AD
Sbjct: 797 YHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLYYLYAD 854
>gi|328707887|ref|XP_001947908.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1128
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 236/640 (36%), Positives = 344/640 (53%), Gaps = 79/640 (12%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+F W+ A V FG+ +R NQ E INA L G + ++M GGGKSLCYQLPAV+ +
Sbjct: 381 SFSWELLA--VFKKTFGLRHFRPNQFEAINAALLGHNCFILMPTGGGKSLCYQLPAVILK 438
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
GI +V+SPL SLI DQ L +L IPA L S+ + ++E IY L + LK+LYVTP
Sbjct: 439 GITVVISPLKSLIIDQTQKLKSLDIPAAHLLSSITPDEENTIYSELWGADPGLKLLYVTP 498
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
EK++ S + + L H L+ I IDEAHC SQWGHDFRPDYK LG+ K + +VP+M
Sbjct: 499 EKVAASNKLIQVLNNLHCRNLLARIVIDEAHCVSQWGHDFRPDYKRLGVFKQNYQNVPIM 558
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATATQ+V+ D++ L+I + FVS+ NRPNL Y V K GK + EIAK I+
Sbjct: 559 ALTATATQRVRKDVLHQLNIEETKWFVSSFNRPNLVYEVIPKK--GKSSLLEIAKLIKSK 616
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+ +SGI+YC ++KEC+ A + GI A YHA + R V M+W+ NK V+
Sbjct: 617 FA-RQSGIIYCMTKKECDNTAIFMSGEGIKAVSYHAGLTDKKRNDVQMQWTSNKSNVVCA 675
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
T+AFGMGI+KPDVR+VIH+SL +S+E +YQESGRAGRDG + CL+++ +D+ R ++
Sbjct: 676 TIAFGMGIDKPDVRYVIHYSLPQSIEGFYQESGRAGRDGDVAYCLIYYNYSDMHRIKKLI 735
Query: 432 ------FYENSGLQ--NLYDIVRYSQYPLHW-----------NIEKVRLVIFEKLQQVNL 472
YE ++ NL IV Y + + +K + + EK N
Sbjct: 736 EIGGGATYETKKVRFHNLCRIVSYCENKMDCRRAMQLNYFDEQFDKAQCIANEKTTCDNC 795
Query: 473 -----FCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD----------------KMKIK 511
++ + + +I+ +Q+I + T VD K I
Sbjct: 796 RIKHSIKIIDVTEESINLITAVQEICSSGNNFTFTHFVDIFKGKKTQKVVLHGHEKSNIF 855
Query: 512 LKEIDSDLKREEIEQLVLQLIIDRVL---------------VRIGPFSPG--KKIIKLEI 554
K + D R++IE+L+ +LI++ L +RIGP + +KL +
Sbjct: 856 GKALHWD--RDDIERLIHKLILEGYLREEMIAFKSDIMNAYIRIGPEAEKLLTGFLKLSL 913
Query: 555 S-SVQKNTADNK-KSTKRSLTSSALEFELDELRKELASISGG------ILPHSVLSSQLI 606
+ S + N DN S K S + LE ++ L + G I ++V++ Q I
Sbjct: 914 ALSPKTNLIDNNIVSIKDSTVNPILEEIKEKCYTNLMEVCRGLAESLDISTNAVMTIQAI 973
Query: 607 RLISARKPSTMEEASSNHLEKIIGKLKTG--KYGSRILEV 644
R +S P+ E+ + KI G K+ K+G +LE+
Sbjct: 974 RSMSQLMPTNEED-----MLKIDGVTKSNFEKFGQPLLEI 1008
>gi|46107336|ref|XP_380727.1| hypothetical protein FG00551.1 [Gibberella zeae PH-1]
Length = 1672
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 177/358 (49%), Positives = 237/358 (66%), Gaps = 8/358 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W + + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV++
Sbjct: 814 YPWSPEVQRMLKDRFRMKGFRCNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTG 873
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
G+ +VVSPLLSL+QDQV + ALGI A S E ++ + A + E L++
Sbjct: 874 KTRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGECSAEYKRQVMSAFNERSPEHFLEL 933
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE +SK+ F + L+ H G+ + + IDEAHC SQWGHDFRPDYK LG ++ ++P
Sbjct: 934 LYVTPEMVSKNANFNNGLQTLHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQKYP 993
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+MALTATAT+ V D+ L + C F + NRPNL+Y VR KS+ G+ I+ IA
Sbjct: 994 GVPVMALTATATKNVIVDIRHNLGMDDCQTFSQSFNRPNLYYEVRPKST-GEKTIESIAS 1052
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
IQ +Y N +SGIVY SRK E+VA+ L GI+A +YHA D + V W + ++
Sbjct: 1053 LIQSNYAN-KSGIVYTISRKSAEKVAESLSDSGITARHYHAGCDPQEKVDVQNAWQRGQV 1111
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V+V T+AFGMGI+KPDVRFVIHH + KS+E YYQE+GRAGRDG PS+C+LF+ AD+
Sbjct: 1112 KVVVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQETGRAGRDGNPSDCILFYGKADI 1169
>gi|302890734|ref|XP_003044250.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
gi|256725172|gb|EEU38537.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
Length = 1302
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 179/356 (50%), Positives = 240/356 (67%), Gaps = 8/356 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + FG+ +R NQ E INA L G+D V+M GGGKSLCYQLPAV++
Sbjct: 688 WSPEVRRMLKDRFGMEEFRHNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTGKT 747
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG--EGELKMLY 188
+G+ +VVSPLLSL+QDQV + LGI A S E ++ + A E+G E +++LY
Sbjct: 748 QGVTIVVSPLLSLMQDQVDHMKRLGIQAVAFHGECSAEYKRQVMAAFEEGIPEHHVELLY 807
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE + KS F + ++ H G+L+ I IDEAHC SQWGHDFRPDYK LG ++ ++P V
Sbjct: 808 VTPEMVGKSTAFNNGMQTLHGRGKLARIVIDEAHCISQWGHDFRPDYKALGQVRQRYPGV 867
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATATQ V D+ L + +C F + NRPNL+Y VR K++ K ID IA I
Sbjct: 868 PVMALTATATQNVIADIRHNLGMDRCQTFSQSFNRPNLYYEVRPKTTNNKT-IDSIASLI 926
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ Y N +SGIVY SRK E+VA+ L ++GI A +YHA +D + +V W + +++V
Sbjct: 927 RLQYRN-QSGIVYTISRKNAEKVAESLTKQGIMARHYHAHVDPREKVEVQDGWQRGQVKV 985
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V TVAFGMGI+KPDVRFV+HH L KS+E YYQE+GRAGRDG PS+C+LF+ D+
Sbjct: 986 VVATVAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAGRDGNPSDCILFYGKGDI 1041
>gi|408399479|gb|EKJ78580.1| hypothetical protein FPSE_01246 [Fusarium pseudograminearum CS3096]
Length = 1673
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 177/358 (49%), Positives = 237/358 (66%), Gaps = 8/358 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W + + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV++
Sbjct: 815 YPWSPEVQRMLKDRFRMKGFRCNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTG 874
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
G+ +VVSPLLSL+QDQV + ALGI A S E ++ + A + E L++
Sbjct: 875 KTRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGECSAEYKRQVMSAFNERSPEHFLEL 934
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE +SK+ F + L+ H G+ + + IDEAHC SQWGHDFRPDYK LG ++ ++P
Sbjct: 935 LYVTPEMVSKNANFNNGLQTLHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQKYP 994
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+MALTATAT+ V D+ L + C F + NRPNL+Y VR KS+ G+ I+ IA
Sbjct: 995 GVPVMALTATATKNVIVDIRHNLGMDDCQTFSQSFNRPNLYYEVRPKST-GEKTIESIAS 1053
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
IQ +Y N +SGIVY SRK E+VA+ L GI+A +YHA D + V W + ++
Sbjct: 1054 LIQSNYAN-KSGIVYTISRKSAEKVAESLSDSGITARHYHAGCDPQEKVDVQNAWQRGQV 1112
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V+V T+AFGMGI+KPDVRFVIHH + KS+E YYQE+GRAGRDG PS+C+LF+ AD+
Sbjct: 1113 KVVVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQETGRAGRDGNPSDCILFYGKADI 1170
>gi|297837387|ref|XP_002886575.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332416|gb|EFH62834.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1172
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 181/377 (48%), Positives = 247/377 (65%), Gaps = 5/377 (1%)
Query: 56 IQYGGSSSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMA 114
I + S+ + W S F W + VFG ++R NQ+EIINA +SG DV V+M
Sbjct: 458 IDVTDTESSNDKKWASRDFPWTKNLEVYNKIVFGNHSFRPNQREIINATMSGCDVFVLMP 517
Query: 115 AGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY 174
GGGKSL YQLPA+L GI LV+SPL+SLIQDQ+M L I A L++ ++ I
Sbjct: 518 TGGGKSLTYQLPALLCAGITLVISPLVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEIL 577
Query: 175 KALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPD 234
+ L + K+LYVTPEK++KS+ + LE + L+ IDEAHC SQWGHDFRPD
Sbjct: 578 QELSSENSKYKLLYVTPEKVAKSESLIRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPD 637
Query: 235 YKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKS 294
Y+ LG+LK +FP++PM+ALTATAT V+ D+++ L + C+ F + NRPNL+Y V K+
Sbjct: 638 YQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT 697
Query: 295 SVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAR 354
+ +++I K+I+E++ + E GI+YC SR +CE+V + LR G A +YH MD R
Sbjct: 698 N---KCLEDIDKFIRENHFD-ECGIIYCLSRMDCEKVTEMLRAFGHKAAFYHGSMDPGKR 753
Query: 355 EKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSE 414
V +WSK+++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S
Sbjct: 754 AFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSS 813
Query: 415 CLLFFRPADVPRQSSMV 431
C+L++ D R M+
Sbjct: 814 CVLYYSYTDYIRVKHMI 830
>gi|350417151|ref|XP_003491281.1| PREDICTED: Bloom syndrome protein homolog [Bombus impatiens]
Length = 1344
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 239/656 (36%), Positives = 348/656 (53%), Gaps = 103/656 (15%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ + INA + G D V+M GGGKSLCYQLPA+L G+ +V+SPL SLI D
Sbjct: 636 FGLYSFRPNQLQAINAAILGFDCFVLMPTGGGKSLCYQLPALLLPGVTIVISPLKSLILD 695
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA ++ + IY+ L K E LK+LYVTPEKIS S++F + L
Sbjct: 696 QVQKLTSLDIPAAHMSGGITDSQASGIYRELSKKEPSLKLLYVTPEKISASQKFCNLLTT 755
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L+ IDEAHC SQWGHDFRPDYK L L+ +P VP++ALTATAT +V+ D++
Sbjct: 756 LYERGLLARFVIDEAHCVSQWGHDFRPDYKKLNRLRENYPKVPVIALTATATPRVRTDIL 815
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + F+S+ NRPNL Y + K GK DE+ ++ Y N E GIVYC SRK
Sbjct: 816 HQLGLSVPKWFMSSFNRPNLRYSIIAKK--GKNCSDEVIAMLKMKYKN-ECGIVYCLSRK 872
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+C+ A ++R+ GI A YHA ++R + RW +++V+ T+AFGMGI+KP+VRF
Sbjct: 873 DCDDYAMQMRKNGIKALSYHAGHTDSSRTDIQGRWISEEIKVVCATIAFGMGIDKPNVRF 932
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYEN-------SGLQ 439
VIH +L KS+E YYQESGRAGRDG ++C+LF+ AD+ R M+ +N + +
Sbjct: 933 VIHAALPKSIEGYYQESGRAGRDGENADCILFYNYADMHRIRKMIELDNPNPTVTKTHID 992
Query: 440 NLYDIVRYSQYP--------LHWNIEKVRLVIFEKLQQV-------------NLFCMVVL 478
NLY +V + + LH+ E +F++ Q + + F M+
Sbjct: 993 NLYKMVSFCENKTDCRRAQQLHYFGE-----MFDRQQCIANKATSCDNCRCKDDFTMLDT 1047
Query: 479 AGHAQCIISLLQDI-QDNNQRLTMLQLVDKMKIKLKEIDSDLK----------------- 520
A+ I+ ++DI Q N LT++ L D K SDLK
Sbjct: 1048 TDEAKHILRAVRDINQSRNSNLTLVLLTDIFK------GSDLKKLRESGLTKNPLYGRGR 1101
Query: 521 ---REEIEQLVLQLIIDRVL--------------VRIGPFSP---GKKIIKLEISSVQKN 560
R +IE+L+ +++ L ++IGP + KK IK+ + N
Sbjct: 1102 SWNRHDIERLLHYMVLKEYLQEQMYINNEIACAYLKIGPNASELMTKKDIKVMLPMKSSN 1161
Query: 561 TADNKKSTKRSLTSSA----LEFE---LDELRKELASISGG--ILPHSVLSSQLIRLISA 611
+ +T ++T LE + EL + + I+G I SV++ IR +S
Sbjct: 1162 NSTTAVATVSTVTKKIDKVLLELQQRCYQELMEIIKGIAGALDISASSVMNMIAIRAMSQ 1221
Query: 612 RKPSTMEEASSNHLEKI--IGKLKTGKYGSRILEVISKCG-------NSEQQHDNN 658
P + EEA + +I + K KYG +L++ K N E++ NN
Sbjct: 1222 NLPDS-EEA----MLRIPHVTKANFEKYGKALLDITQKYAAEKYVLMNEEKEDSNN 1272
>gi|323455269|gb|EGB11138.1| hypothetical protein AURANDRAFT_52627 [Aureococcus anophagefferens]
Length = 616
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 175/379 (46%), Positives = 243/379 (64%), Gaps = 9/379 (2%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WSG WD A D L + A+R Q+EIINA L+GRDV ++ GGGKSLCYQLPA+
Sbjct: 54 WSGGQAWDG-AVDAALQRCALAAFRPLQREIINAALAGRDVFAVLRTGGGKSLCYQLPAL 112
Query: 129 L-REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL--- 184
+VVSPL+SLI+DQ LG+ A LTS + ++ K L +
Sbjct: 113 AGPPATTVVVSPLVSLIEDQARACGDLGLRAVALTSASGRDALNAALKDLGEAATGAAEA 172
Query: 185 --KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
++++VTPE+++ SKR ++ LEKC AGRL+ IDEAHC S WGHD+RPDY LG L+
Sbjct: 173 AGRVVFVTPERVASSKRLLATLEKCEKAGRLARFVIDEAHCASAWGHDYRPDYAKLGSLR 232
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHI-RKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
T FP VP++ALTATAT +V D+ E+L + R+ ++F +RPNLF+ VR K + +
Sbjct: 233 TAFPRVPILALTATATPRVLRDVEEILGLGRRTVRFRGKSDRPNLFFEVRRKPAAKDDAV 292
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
+A ++ E + +G+VYC S+KECE V+ LR RG+ A YHA + +R +VH W
Sbjct: 293 AALAAFVDE-VGRTATGVVYCLSQKECEDVSSGLRTRGLRAAPYHAGLPDESRSRVHDAW 351
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
+ + V+ T+AFG+GI+KPDVR+V H + SK++E+YYQE+GRAGRDG P+ C LF+R
Sbjct: 352 RRGSVAVVCATIAFGLGIDKPDVRYVAHFTCSKALESYYQEAGRAGRDGAPARCCLFYRA 411
Query: 422 ADVPRQSSMVFYENSGLQN 440
AD+ R S+ E SG N
Sbjct: 412 ADLWRIFSLTATEASGAAN 430
>gi|342879842|gb|EGU81076.1| hypothetical protein FOXB_08424 [Fusarium oxysporum Fo5176]
Length = 1668
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 179/358 (50%), Positives = 236/358 (65%), Gaps = 8/358 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W S + + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV++
Sbjct: 809 YPWSSEVQRMLKDRFRMKGFRCNQLEAINATLGGQDAFVLMPTGGGKSLCYQLPAVVKTG 868
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
G+ +VVSPLLSL+QDQV + ALGI A S E ++ + A + E L++
Sbjct: 869 KTRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGECSAEYKRQVMSAFNEKSPEHFLEL 928
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE +SK+ F S LE H G+ + + IDEAHC SQWGHDFRPDYK LG ++ ++P
Sbjct: 929 LYVTPEMVSKNVNFNSGLETLHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQKYP 988
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+MALTATAT+ V D+ L + C F + NRPNL+Y VR K++ KV +D I+
Sbjct: 989 GVPVMALTATATKNVIVDIRHNLGMDNCQIFSQSFNRPNLYYEVRPKTTNEKV-MDAISS 1047
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
I Y N +SGIVY SRK E+VA+ L GI+A +YHA D + +V W + +
Sbjct: 1048 LIHSRYAN-QSGIVYTISRKNAEKVAESLSGNGITARFYHAGCDPQEKVEVQNSWQRGHV 1106
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V+V T+AFGMGI+KPDVRFVIHH L KS+E YYQE+GRAGRDG PS+C+LF+ AD+
Sbjct: 1107 KVVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGNPSDCILFYGKADI 1164
>gi|452838315|gb|EME40256.1| hypothetical protein DOTSEDRAFT_179253 [Dothistroma septosporum
NZE10]
Length = 1189
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 175/374 (46%), Positives = 241/374 (64%), Gaps = 9/374 (2%)
Query: 65 AVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
A+E + ++ W F + +R NQ E INA L G+D V+M GGGKSLCYQ
Sbjct: 279 AIERKNFSYPWSDEVKRTLKESFKLKGFRENQCEAINATLGGKDAFVLMPTGGGKSLCYQ 338
Query: 125 LPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LPA++R G+ +V+SPLLSL++DQV L L I A ++ S T+KE+ F+ +L+
Sbjct: 339 LPALIRGGKTRGVTVVISPLLSLMEDQVQHLRNLNIQAFLINSETTKEERGFLLDSLKNP 398
Query: 181 EGE--LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
+ E + +LYVTPE +SKS + + H + R + + IDEAHC SQWGHDFRPDYK +
Sbjct: 399 DVEKFITLLYVTPEMLSKSAAINNAFTRLHQSRRFARLVIDEAHCVSQWGHDFRPDYKEI 458
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
G ++ + P VP+MALTATAT+ V+ D + L I+ C F + NRPNL+Y VR K GK
Sbjct: 459 GEVRNRLPGVPVMALTATATENVKLDTIHNLGIKGCEVFTQSFNRPNLYYEVRMKGK-GK 517
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELR-QRGISADYYHADMDINAREKV 357
+ IA I++ +P ++GI+YCFSRK+CE +A L+ Q GI A +YHA M+ + V
Sbjct: 518 NDLASIASLIKDDHPK-QTGIIYCFSRKDCENMANALQSQHGIKAHHYHAGMEGPEKANV 576
Query: 358 HMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLL 417
W + VIV T+AFGMGI+KP+VRFVIHH++ KS+E YYQE+GRAGRDG PS C L
Sbjct: 577 QKEWQAGRYHVIVATIAFGMGIDKPNVRFVIHHTIPKSLEGYYQETGRAGRDGKPSSCYL 636
Query: 418 FFRPADVPRQSSMV 431
F+ D +Q +
Sbjct: 637 FYGFGDASKQKRFI 650
>gi|302926382|ref|XP_003054285.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
gi|256735226|gb|EEU48572.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
Length = 1678
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 172/344 (50%), Positives = 234/344 (68%), Gaps = 8/344 (2%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV++ G+ +VVSPLLS
Sbjct: 831 FRMKGFRHNQLEAINATLEGKDAFVLMPTGGGKSLCYQLPAVIKSGRTRGVTIVVSPLLS 890
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISKSKRF 200
L+QDQV + ALGI A S + ++ + A ++ E +++LYVTPE +SK+ F
Sbjct: 891 LMQDQVDHMKALGIQAVAFNGECSAQYKRQVMSAFDERSPEHFIELLYVTPEMVSKNVAF 950
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ + H G+ + + IDEAHC SQWGHDFRPDYK LG ++ ++P VP+MALTATATQ
Sbjct: 951 NNGMRTLHSKGKFARLVIDEAHCVSQWGHDFRPDYKTLGQVRQRYPGVPVMALTATATQN 1010
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V D+ L + C F + NRPNL+Y VR K++ K I+ IA +Q YPN +SGIV
Sbjct: 1011 VIVDIRHNLGMDNCQTFCQSFNRPNLYYEVRPKTTNDKT-IEAIASLVQSKYPN-QSGIV 1068
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
Y SRK E+VA+ L Q GI+A +YHA +D + +V W + +++++V T+AFGMGI+
Sbjct: 1069 YTISRKNAEKVAESLSQHGIAASHYHAHVDPQEKVEVQNAWQRGEIKIVVATIAFGMGID 1128
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
KPDVRFV+HH L KS+E YYQE+GRAGRDG PS+C+LF+ D+
Sbjct: 1129 KPDVRFVMHHGLPKSLEGYYQETGRAGRDGKPSDCILFYGKQDI 1172
>gi|121710174|ref|XP_001272703.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
gi|119400853|gb|EAW11277.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
Length = 1542
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 187/393 (47%), Positives = 250/393 (63%), Gaps = 12/393 (3%)
Query: 48 FEASRGSPIQYGGSSSTAVEN--WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLS 105
F + G+ ++ G+ + N W+ W V + F + +R NQ E I+A LS
Sbjct: 668 FVETSGNISRFAGTQKSQTHNPLWN-QHPWSKDVKRVLKDKFHLRGFRMNQLEAIDATLS 726
Query: 106 GRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHML 161
G+D V+M GGGKSLCYQLP+V+ G+ +VVSPLLSL+QDQV L A+ I A +L
Sbjct: 727 GKDTFVLMPTGGGKSLCYQLPSVVTTGSTRGVTIVVSPLLSLMQDQVSHLKAINIKAFLL 786
Query: 162 TSTTSKEDEKFIYKALEK--GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISID 219
T +++ +I + L E +++LY+TPE I+KS+ + LEK + RL+ I ID
Sbjct: 787 NGETKRDERTWIMQTLSGPVAEERIELLYITPEMINKSQALIQSLEKLNKRHRLARIVID 846
Query: 220 EAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVS 279
EAHC SQWGHDFRPDYK LG ++ + P VPM+ALTATAT+ V+ D + L + C F
Sbjct: 847 EAHCVSQWGHDFRPDYKELGEIRNRLPGVPMIALTATATENVKVDTIHNLKMEGCEIFTQ 906
Query: 280 TINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR- 338
+ NRPNL Y VR+K + V+D IA I+ SYPN +SGIVYC SRK CE VA+ L +
Sbjct: 907 SFNRPNLTYEVRQKGKSSE-VMDSIANTIKTSYPN-KSGIVYCLSRKACESVAEILASKY 964
Query: 339 GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVET 398
I AD+YHA + R +V RW ++ VIV T+AFGMGI+KPDVRFVIHHS+ KS+E
Sbjct: 965 KIKADFYHAGVASAKRAEVQERWQTGRVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEG 1024
Query: 399 YYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
YYQE+GRAGRDG S C L++ D SM+
Sbjct: 1025 YYQETGRAGRDGKRSGCYLYYSYRDYTSLQSMI 1057
>gi|402587392|gb|EJW81327.1| ATP-dependent DNA helicase, partial [Wuchereria bancrofti]
Length = 396
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/402 (44%), Positives = 259/402 (64%), Gaps = 19/402 (4%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
ME ++ +ELE +E ++ ++++ + L++R+ Q+ +R ++
Sbjct: 13 MELSKLDEELERIEGDICSLRKRKRTLLERKAQIEKR-----------------IVERNL 55
Query: 61 SSSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
++ + W S F W + +VF + +R Q+ +INAVLS D LV+M+ G GK
Sbjct: 56 KDESSFKIWDSDEFRWMKDCRHILHDVFKLSDFRPLQRAVINAVLSREDCLVVMSTGSGK 115
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SLCYQLPAV+ +GI LVVSPL++LI+DQ+ L LGI A L +T+KE+ I AL
Sbjct: 116 SLCYQLPAVVMKGIVLVVSPLVALIEDQLHQLRKLGIDAATLNQSTAKEEVNRIQTALTD 175
Query: 180 GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
+ L++LYVTPEK++KSKR M++LEKC+ RL LI++DE HCCSQWGHDFRPD+K L
Sbjct: 176 SKASLRLLYVTPEKLAKSKRIMNRLEKCNEMKRLKLIAVDEVHCCSQWGHDFRPDFKFLN 235
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
+LK QF VP++ LTATAT V +D+ ML I + F + NRPNL Y V +K S
Sbjct: 236 VLKRQFQAVPLIGLTATATADVIDDVKNMLGIPAAVVFRAGFNRPNLHYSVCQKPSSDAE 295
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHM 359
++ + + I+ + +SGI+YCFSRKECE++ + LR +G+ A +YHA +D + R H
Sbjct: 296 FVNILVELIKTRFA-GQSGIIYCFSRKECEELTKSLRAKGVKASHYHAFLDADKRNITHE 354
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQ 401
+W + VIV TVAFGMGI+KP+VR+VIHHSL KS+E YYQ
Sbjct: 355 KWLNGGINVIVATVAFGMGIDKPNVRYVIHHSLPKSLENYYQ 396
>gi|67469885|ref|XP_650914.1| recQ family helicase [Entamoeba histolytica HM-1:IMSS]
gi|56467579|gb|EAL45525.1| recQ family helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 1182
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 229/353 (64%), Gaps = 6/353 (1%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W VFG ++R +Q+ IIN V+S + LV+M GGGKSLCYQLP+ +G
Sbjct: 444 FSWKENIKKCNNTVFGNDSFRPSQEAIINCVMSRNNALVLMPTGGGKSLCYQLPSYFIKG 503
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVT 190
I LVVSPL+SLIQDQV L G+ A S +S ED K YK + EG+ +K ++VT
Sbjct: 504 ITLVVSPLVSLIQDQVSNLVETGMEAIAFYSGSSSEDAKQFYKESYQKEGKCTIKFVFVT 563
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPM 250
PE+I++SK F L + + ++ IDEAHC SQWGHDFR Y+ L + ++P +P+
Sbjct: 564 PERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWGHDFRDSYQKLSVFSQEYPGIPI 623
Query: 251 MALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQE 310
+ LTATAT++V+ND++ L I + + F + NR NL Y VR K+ K VIDEI + I+
Sbjct: 624 LMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTYCVRPKT---KGVIDEIEEMIKR 680
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIV 370
Y +SGI+YC S+K +AQEL +RGI + YYHA MD R V W + VI
Sbjct: 681 KYK-GQSGIIYCLSQKNTMDIAQELNKRGIKSKYYHAGMDTKERTTVQKEWCDGEFNVIC 739
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
T+AFGMGI+KPDVRFVIHHSL KS+E YYQESGRAGRDG P++C+L++ D
Sbjct: 740 ATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGEPADCILYYNYRD 792
>gi|449704341|gb|EMD44603.1| ATP-dependent helicase SGS1, putative [Entamoeba histolytica KU27]
Length = 1170
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 229/353 (64%), Gaps = 6/353 (1%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W VFG ++R +Q+ IIN V+S + LV+M GGGKSLCYQLP+ +G
Sbjct: 432 FSWKENIKKCNNTVFGNDSFRPSQEAIINCVMSRNNALVLMPTGGGKSLCYQLPSYFIKG 491
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVT 190
I LVVSPL+SLIQDQV L G+ A S +S ED K YK + EG+ +K ++VT
Sbjct: 492 ITLVVSPLVSLIQDQVSNLVETGMEAIAFYSGSSSEDAKQFYKESYQKEGKCTIKFVFVT 551
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPM 250
PE+I++SK F L + + ++ IDEAHC SQWGHDFR Y+ L + ++P +P+
Sbjct: 552 PERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWGHDFRDSYQKLSVFSQEYPGIPI 611
Query: 251 MALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQE 310
+ LTATAT++V+ND++ L I + + F + NR NL Y VR K+ K VIDEI + I+
Sbjct: 612 LMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTYCVRPKT---KGVIDEIEEMIKR 668
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIV 370
Y +SGI+YC S+K +AQEL +RGI + YYHA MD R V W + VI
Sbjct: 669 KYK-GQSGIIYCLSQKNTMDIAQELNKRGIKSKYYHAGMDTKERTTVQKEWCDGEFNVIC 727
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
T+AFGMGI+KPDVRFVIHHSL KS+E YYQESGRAGRDG P++C+L++ D
Sbjct: 728 ATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGEPADCILYYNYRD 780
>gi|321263530|ref|XP_003196483.1| ATP-dependent DNA helicase [Cryptococcus gattii WM276]
gi|317462959|gb|ADV24696.1| ATP-dependent DNA helicase, putative [Cryptococcus gattii WM276]
Length = 862
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/413 (45%), Positives = 264/413 (63%), Gaps = 21/413 (5%)
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
++ ++ S F + S N F + +R Q+ +INA + RD++ +M GGGKSL
Sbjct: 115 AANTIDYQSSHFPFSSAIAATLRNTFNLNKFRLCQEGVINAAVDDRDIVCVMPTGGGKSL 174
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG- 180
YQLPAV+ G+ +VVSPLL+LI DQV L +GI MLT +TS +++ IY L G
Sbjct: 175 TYQLPAVMGRGLTVVVSPLLALIWDQVRALKEIGIECVMLTGSTSTQEQNEIYARLRDGP 234
Query: 181 ---EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKN 237
E E+++ YVTPEKISKSKRF+S LEK + +G+L IDEAHCCSQ GHDFRPDYK
Sbjct: 235 SHGEKEIRLCYVTPEKISKSKRFISALEKMNQSGQLRRFVIDEAHCCSQLGHDFRPDYKK 294
Query: 238 LGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKC----IKFVSTINRPNLFYMVREK 293
L +LKT FP VP+ A+TAT + K DL+++L + I F S + RPNL Y V K
Sbjct: 295 LSMLKTLFPRVPIQAVTATLSSKTLPDLLKILRLGPITDGRIFFSSPLFRPNLHYKVLPK 354
Query: 294 SSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINA 353
+S K I E+ K+IQ+ +P ESGIVYC S+K+ E VA+ELR+ S YHA +D
Sbjct: 355 ASNAKTAIAEMGKWIQDKHPG-ESGIVYCLSKKDAETVAEELRE--WSNGVYHAGIDDAE 411
Query: 354 REKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPS 413
+E +H+RW + K+ I T+AFG+GI+K DVR+ +SKS+E YYQE+GRAGRDG S
Sbjct: 412 KEIIHVRWREGKVNCICATIAFGLGIDKGDVRY-----MSKSLEGYYQETGRAGRDGKDS 466
Query: 414 ECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEK 466
+C+LF+R D R + +++ + G L+++++++Q ++ R V F K
Sbjct: 467 DCVLFYRGQDATRLAGLIYTDVDGTGKLHEMLKFAQ-----DLRTCRKVAFAK 514
>gi|452978196|gb|EME77960.1| hypothetical protein MYCFIDRAFT_216933 [Pseudocercospora fijiensis
CIRAD86]
Length = 1607
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 314/560 (56%), Gaps = 67/560 (11%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL-- 129
+F W V +VF + +R NQ E INA L G+DV V+M GGGKSL YQLPA++
Sbjct: 687 SFRWSPDVGRVLRHVFKLKGFRKNQLEAINATLEGQDVFVLMPTGGGKSLTYQLPALVPT 746
Query: 130 --REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LK 185
+G+ +V+SPLLSL+QDQV L LG+ A ++ S TS+E+ I AL E E ++
Sbjct: 747 GKTQGVTIVISPLLSLMQDQVEHLRKLGVQATLINSETSREERDLIMDALWDREPERMVQ 806
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPE + KS++ + E H +L+ I IDEAHC SQWGHDFRPDYKNLG ++ +F
Sbjct: 807 LLYVTPEMLGKSEKMLRTFEGLHRKRKLARIVIDEAHCVSQWGHDFRPDYKNLGEVRQRF 866
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP+MALTATAT+ V++D + L + C F S+ NR NL Y V K GK + +A
Sbjct: 867 PGVPVMALTATATEIVKSDTIHNLSMDGCAVFTSSFNRTNLSYSVLPKPK-GKQDVQSMA 925
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKN 364
+ I++ + ++GI+YC SRK CE +A L + I A +YHA MD A+ V W
Sbjct: 926 EVIKKDH-AKDTGIIYCLSRKNCEDIAAALVNEHRIKAKHYHAGMDSIAKADVQKEWQAG 984
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+ VIV T+AFGMGI+K +VRFVIHHS+ KS+E YYQE+GRAGRDG PS C L++ D
Sbjct: 985 HVHVIVATIAFGMGIDKSNVRFVIHHSIPKSLEGYYQETGRAGRDGKPSACYLYYGYGDA 1044
Query: 425 PRQSSMV-------FYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF------------- 464
+ M+ ++ Q L +V+Y + + +V+++ +
Sbjct: 1045 GKLRKMIDDGEGNWDQKDRQHQMLSKMVQYCEN--KSDCRRVQVLGYFGEAFEPEDCLGG 1102
Query: 465 -EKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMK---------IKLKE 514
+ + F V HA+ ISL+++++D Q++T+L +D + K ++
Sbjct: 1103 CDNCTSGSTFEEVDYTQHARDAISLVRELRD--QKVTILHCIDMFRGANTKKGRDAKHEK 1160
Query: 515 I-----DSDLKREEIEQLVLQLIIDRVLV-------------------RIGPFSPGKKII 550
+ DL R ++E+L +L+ ++ +V R F+PGK +
Sbjct: 1161 VAHFGKGEDLDRGDVERLFYRLVNEQAIVEESHKNKRGFVLSYVNLGRRCNDFAPGKARL 1220
Query: 551 KLEISSVQKNTADNKKSTKR 570
K+ I S + T KK KR
Sbjct: 1221 KMLIRSSPRATKIVKKPMKR 1240
>gi|358054726|dbj|GAA99652.1| hypothetical protein E5Q_06355 [Mixia osmundae IAM 14324]
Length = 768
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 189/480 (39%), Positives = 290/480 (60%), Gaps = 27/480 (5%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFE---ASRGSPIQYGG 60
E + ++L ++AE+ + +QI +L + QL R LK ++AF A P+Q
Sbjct: 77 EGLTEDLHQLDAEIDSIDQQIVELQALKTQLLVRHRALKIEIQAFVRPVAPAAKPVQ--- 133
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
S++A + S +F W + +V+ I +R Q+ + NAV+ GR ++ IMA G GKS
Sbjct: 134 RSTSATDYKSHSFAWSADLRKHLKSVWHIDTFRPLQEAVCNAVMDGRTLMAIMATGSGKS 193
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LCYQLPA+L+EG +++SPLLSLI DQ+ L +G+ A L TT+KE I L++G
Sbjct: 194 LCYQLPALLQEGTTVIISPLLSLIHDQLYSLREVGVEAEALIGTTTKEQTNGIMARLQRG 253
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+ ++K+LYVTPEK+ KS+R ++ L K AG L+ I IDEAHC SQ GHDFRPDY+ L +
Sbjct: 254 D-DIKLLYVTPEKVVKSRRLVNVLTKLETAGNLARIVIDEAHCASQQGHDFRPDYRQLVM 312
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRK-----------CIKFVSTINRPNLFYM 289
L+ FP+VP +TAT + V DL+ +L + + F + + R NL Y
Sbjct: 313 LRKLFPEVPFTLVTATCSPTVLKDLLSILELPPVTEPSAANAYGTVLFRAPLYRANLHYT 372
Query: 290 VREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQ---ELRQRGISADYYH 346
V+ K + +++E+ +IQE Y +SGIVYC S+K+ E AQ E + GI A +H
Sbjct: 373 VKAKPASPPALVEEMVDFIQE-YHRGQSGIVYCLSQKDTETTAQAIEEASKGGIVARAFH 431
Query: 347 ADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRA 406
A ++ +E+ H +W +QVI T+AFG+G++ PD RFV HHSLSK+++ Y QESGR+
Sbjct: 432 AGLEDAEKERCHRKWRNKSIQVICATIAFGLGVDSPDCRFVFHHSLSKNLDAYLQESGRS 491
Query: 407 GRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEK 466
GRDG + C+L++R D+PR +S+V + G + L ++ Y+ +++ R +IF +
Sbjct: 492 GRDGRDASCVLWYRSQDIPRMASLVATDRDGSRKLGTMISYAS-----DLKTCRKLIFAR 546
>gi|443898809|dbj|GAC76143.1| hypothetical protein PANT_19d00137 [Pseudozyma antarctica T-34]
Length = 1364
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/501 (40%), Positives = 281/501 (56%), Gaps = 59/501 (11%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL----REGIALVVSPL 140
+ F + +RANQ E IN L GRDV V+M GGGKSLCYQLPA + +GI +VVSPL
Sbjct: 644 HFFKLKRFRANQLEAINGTLMGRDVFVLMPTGGGKSLCYQLPACVDSGSTKGITIVVSPL 703
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
LSLIQDQV L +LGI A LT D++ + + ++++YVTPE I +S +
Sbjct: 704 LSLIQDQVRHLLSLGIIAAKLTGDMKHADKQTVCAEALSSQSAVRLIYVTPEFIRQSNQA 763
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ L H R++ +DEAHC SQWGHDFRP Y LG L+ +P+VP+MALTATA ++
Sbjct: 764 KTLLNDLHRRKRIARFVVDEAHCVSQWGHDFRPHYTELGALRDDYPNVPIMALTATANER 823
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V D+ E LH++ I+ + NRPNL Y VR K G V++EI+ I S+ + + GI+
Sbjct: 824 VIKDVKEHLHMKDVIQLSQSFNRPNLEYQVRPKP--GNKVLEEISSLILTSHKD-QCGII 880
Query: 321 YCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
YCFSR+ CE VA +L + GISA +YHA + + R V +W +NK +VIV T+AFGMGI
Sbjct: 881 YCFSRESCETVAHDLSTKYGISAHHYHAKLSADDRAMVQQKWQQNKFRVIVATIAFGMGI 940
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--- 436
+KPDVRFVIHHS KS+E YYQE+GRAGRDG S C+L++ AD+ + SM+ E
Sbjct: 941 DKPDVRFVIHHSAPKSLEGYYQETGRAGRDGKSSVCILYYNYADINKMKSMIEKEEDKSP 1000
Query: 437 -----GLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQC------- 484
+Q+L DI R+ IE R+ + + M H C
Sbjct: 1001 EAKERAIQSLDDIARFCNN----KIECRRVQVLRYFGETFSAAMC----HNTCDNCCRKG 1052
Query: 485 --------------IISLLQDIQDNNQRLTMLQLVDKMK--------------IKLKEID 516
+ L+Q + DN +LT+ VD + I++
Sbjct: 1053 DTIRTEDVTEMAKKAVRLVQKLTDNRSQLTLSYCVDVFRGSRRKEITRAGHHQIEMHGAG 1112
Query: 517 SDLKREEIEQLVLQLIIDRVL 537
S LK +E ++L L ++V
Sbjct: 1113 SQLKVDEAKRLFELLCAEKVF 1133
>gi|67523261|ref|XP_659691.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|8101762|gb|AAF72650.1|AF259396_1 RecQ helicase MUSN [Emericella nidulans]
gi|40745763|gb|EAA64919.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|259487457|tpe|CBF86151.1| TPA: Putative uncharacterized proteinRecQ helicase MUSN ;
[Source:UniProtKB/TrEMBL;Acc:Q9P8H3] [Aspergillus
nidulans FGSC A4]
Length = 1534
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 206/489 (42%), Positives = 279/489 (57%), Gaps = 46/489 (9%)
Query: 69 WSGTFEWDSRADDVRLNV---FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
W G W DV++ + F + +R NQ E I++ LSG+D V+M GGGKSLCYQL
Sbjct: 679 W-GQHPW---TKDVKIALKERFHLRGFRPNQLEAIDSTLSGKDTFVLMPTGGGKSLCYQL 734
Query: 126 PAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--EK 179
P+V+ G+ LV+SPLLSL+QDQV L I A+++ T E+ ++I L
Sbjct: 735 PSVISSGSTRGVTLVISPLLSLMQDQVSHLRQNKIKAYLINGDTPSEERQWIMSTLSSHN 794
Query: 180 GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
E +++LY+TPE ISKS ++EK +L+ + IDEAHC SQWGHDFRPDYK +G
Sbjct: 795 PETHIELLYITPEMISKSHALTDRIEKLCSIQKLARVVIDEAHCVSQWGHDFRPDYKQIG 854
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
+ + P VP+MALTATAT+ V+ D++ L ++ C F + NRPNL Y VR K +
Sbjct: 855 AFRARIPGVPLMALTATATENVKVDVIHNLRMQGCEVFTQSFNRPNLTYEVRRKGKHAE- 913
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVH 358
++D IA I+ +Y N + GIVYC SR CE+VA+ LR I A++YHA +D R +
Sbjct: 914 LLDSIADTIKSTYRN-KCGIVYCLSRNTCEKVAEALRTNYSIKAEHYHAGLDAETRARTQ 972
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
RW + VIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L+
Sbjct: 973 QRWQAGDVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGRRSGCYLY 1032
Query: 419 FRPADVPRQSSMV-FYENS-----GLQN--LYDIVRYSQYPLHWNIEKVR----LVIFE- 465
F DV SM+ E+S G Q L D+V+Y + N R L F
Sbjct: 1033 FSHRDVSTMQSMIEKNEDSDDVQKGRQTRMLNDVVKYCE-----NANDCRRVQILAYFSE 1087
Query: 466 --KLQQVNLFCMVVLAG----------HAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLK 513
K Q N C +G HA I +++ Q+ N+R T+ V+ + K
Sbjct: 1088 SFKRQDCNASCDNCKSGDTFEVQDFSEHASAAIKIVRYFQERNERATLSYCVNIFRGTTK 1147
Query: 514 EIDSDLKRE 522
S RE
Sbjct: 1148 SFRSPEHRE 1156
>gi|358367182|dbj|GAA83801.1| RecQ family helicase MusN [Aspergillus kawachii IFO 4308]
Length = 1549
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/387 (48%), Positives = 246/387 (63%), Gaps = 16/387 (4%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP+V+
Sbjct: 699 WSKDVRNALKDRFHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSVVTSGST 758
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
G+ +V+SPLLSL+QDQV L L I A++L T KE ++I L E ++++LY
Sbjct: 759 RGVTIVISPLLSLMQDQVSHLNKLNIKAYLLNGETPKEQRQWILSTLSGFSAEEDIELLY 818
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++KS+ L+K + + +L+ I IDEAHC SQWGHDFRPDYK LG L+ Q P V
Sbjct: 819 ITPEMVNKSQAITKSLDKLNCSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRNQLPGV 878
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR K G V+ IA I
Sbjct: 879 PMMALTATATENVKVDVIHNLKMEGCEVFSQSFNRPNLTYEVRIKKK-GTEVLASIADTI 937
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SY N +SGIVYC SRK CE+VA LR I A++YHA MD R K+ W +
Sbjct: 938 KTSYAN-KSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHAGMDSGERAKIQQAWQAGRTH 996
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L++ D
Sbjct: 997 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDTSTI 1056
Query: 428 SSMVF-------YENSGLQNLYDIVRY 447
SSM+ +N Q L+++V+Y
Sbjct: 1057 SSMIDKGEGSKQQKNRQRQMLHNVVQY 1083
>gi|317032832|ref|XP_001394458.2| recQ family helicase MusN [Aspergillus niger CBS 513.88]
Length = 1460
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/387 (48%), Positives = 246/387 (63%), Gaps = 16/387 (4%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP+V+
Sbjct: 610 WSKDVRNALKDRFHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSVVTSGST 669
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK--GEGELKMLY 188
G+ +V+SPLLSL+QDQV L L I A++L T KE ++I L E ++++LY
Sbjct: 670 RGVTIVISPLLSLMQDQVSHLNRLNIKAYLLNGETPKEQRQWILSTLSGSMAEEDIELLY 729
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++KS+ LEK + + +L+ I IDEAHC SQWGHDFRPDYK LG L+ Q P V
Sbjct: 730 ITPEMVNKSQAITKSLEKLNRSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRNQLPGV 789
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR K G ++ IA I
Sbjct: 790 PMMALTATATENVKVDVIHNLRMEGCEVFSQSFNRPNLTYEVRIKKK-GTELLASIADTI 848
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SY N +SGIVYC SRK CE+VA LR I A++YHA MD R K+ W +
Sbjct: 849 KTSYAN-KSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHAGMDSAERAKIQQDWQAGRTH 907
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L++ D
Sbjct: 908 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDTSTI 967
Query: 428 SSMVF-------YENSGLQNLYDIVRY 447
SSM+ +N Q L+++V+Y
Sbjct: 968 SSMIDKGEGSKQQKNRQRQMLHNVVQY 994
>gi|302883319|ref|XP_003040560.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
gi|256721447|gb|EEU34847.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/356 (49%), Positives = 240/356 (67%), Gaps = 8/356 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV++
Sbjct: 63 WSPEVQRMLKDRFRMKRFRHNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTGKT 122
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLY 188
+G+ +VVSPLLSL+QDQV + +LGI A S E ++ + A ++ E +++LY
Sbjct: 123 QGVTIVVSPLLSLMQDQVDHMKSLGIQAVAFNGECSAEYKRQVMTAFKERSPEDYIELLY 182
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE +SK+ F + + H G+L+ I IDEAHC SQWGHDFRPDYK LG ++ ++P V
Sbjct: 183 VTPEMVSKNITFNNGMRTLHDKGKLARIVIDEAHCVSQWGHDFRPDYKTLGQVRQRYPGV 242
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATATQ V D+ L + C F + NRPNL+Y VR K++ K +DEIA I
Sbjct: 243 PVMALTATATQNVIVDIRHNLGMDNCQTFSQSFNRPNLYYEVRGKTTNAKC-MDEIASLI 301
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ Y N +SGIVY SRK E+VA+ L +GI+A +YHA +D + +V + W + ++++
Sbjct: 302 KSKYAN-QSGIVYTVSRKNAEKVAESLSDQGITARHYHAGVDPQEKAEVQIAWQQGQIKI 360
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
IV T+AFGMGI+KPDVRFVIHH L KS+E YYQE+GRAGRDG PS+C+LF+ D+
Sbjct: 361 IVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGDPSDCILFYGKQDI 416
>gi|154281633|ref|XP_001541629.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411808|gb|EDN07196.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1557
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 185/394 (46%), Positives = 252/394 (63%), Gaps = 20/394 (5%)
Query: 44 LLEAFEASRGSP---IQYGGS-----SSTAVENWSGTF---EWDSRADDVRLNVFGIPAY 92
+ E FE P I +GG ++++ +N + W L+ F + +
Sbjct: 628 VAEHFENQWSGPVRNISFGGPAMRHETTSSAKNPAPELLQHPWSKDVKHALLHRFQLNGF 687
Query: 93 RANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLSLIQDQV 148
R NQ E INA LSG+D V+M GGGKSLCYQLP+V++ +G+ +V+SPLLSL++DQV
Sbjct: 688 RPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVIQSGTTKGVTVVISPLLSLMEDQV 747
Query: 149 MCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISKSKRFMSKLEK 206
L L I A +L S+E +K IY AL E +++LYVTPE ++K+ + L
Sbjct: 748 AHLKRLHIQAFLLNGDVSREGKKVIYGALRNARVEHLIQLLYVTPEMVNKNGALLDILSH 807
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H +L+ I IDEAHC SQWGHDFRPDYK LG +T+FP +P+MALTATAT+ V+ D++
Sbjct: 808 LHSRHKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTRFPGIPLMALTATATENVKVDVI 867
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L +R FV + NRPNL Y VR+K G V+D IA+ I+ SY N ++GI+YC SR+
Sbjct: 868 HNLGMRDAEVFVQSFNRPNLIYEVRQKPK-GTNVVDGIAETIKTSY-NGQAGIIYCLSRQ 925
Query: 327 ECEQVAQELRQ-RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
CE+VA++LR+ I+A +YHA + R + W K VIV T+AFGMGI+KPDVR
Sbjct: 926 SCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQSGKCSVIVATIAFGMGIDKPDVR 985
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
FVIHHS+ KS+E YYQE+GRAGRDG S C L++
Sbjct: 986 FVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYY 1019
>gi|452005005|gb|EMD97461.1| hypothetical protein COCHEDRAFT_1220872 [Cochliobolus heterostrophus
C5]
Length = 1794
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 241/366 (65%), Gaps = 12/366 (3%)
Query: 66 VENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
+N G + W + FG+ +R Q E IN L+G V+M GGGKSLCYQ
Sbjct: 838 AKNHPGMNYPWSQDLRTALIRRFGLRGFRPGQLETINTTLAGNHCFVLMPTGGGKSLCYQ 897
Query: 125 LPAVL----REGIALVVSPLLSLIQDQV-MCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
LP+V+ G+ LVVSPLLSL++DQV C G+ A ++ ++ +K I L +
Sbjct: 898 LPSVIASGKTHGVTLVVSPLLSLMEDQVEACRQRFGMQAFLINGESTAAQKKMIMDGLRE 957
Query: 180 GEGE--LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKN 237
+ + +++LYVTPE +SK++R +S ++ H G L+ I IDEAHC SQWGHDFRPDYK
Sbjct: 958 RDPQQFIQILYVTPEMLSKNQRMISAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKA 1017
Query: 238 LGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVG 297
LG + QFP VP++ALTATAT+ V++D++ L I+ C +F + NRPNL Y V K G
Sbjct: 1018 LGDVVRQFPGVPVLALTATATKLVRSDVVSNLGIQGCQEFSQSFNRPNLSYEVLPK---G 1074
Query: 298 KVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKV 357
K +I+ IA+ I+E Y +SGI+YC SRK CEQVAQ+L GI A +YHA MD R +V
Sbjct: 1075 KGIINSIAELIKERY-VGKSGIIYCLSRKSCEQVAQKLSDMGIRAYHYHAGMDSADRSEV 1133
Query: 358 HMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLL 417
+W KN+ VIV T+AFGMGI+K DVR+VIHHSL KS+E YYQE+GRAGRDG SEC L
Sbjct: 1134 QRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYL 1193
Query: 418 FFRPAD 423
++ AD
Sbjct: 1194 YYLYAD 1199
>gi|7505165|pir||T16536 hypothetical protein K02F3.1 - Caenorhabditis elegans
Length = 886
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 180/398 (45%), Positives = 254/398 (63%), Gaps = 11/398 (2%)
Query: 9 ELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVEN 68
EL +++ E+ + +QI QL ++ +L +++ ++ +E ++ S +
Sbjct: 412 ELADLDGEIGQIDQQISQLRRKKSELTQKRQAIERKIE---------LKTNEDSDVVTDR 462
Query: 69 WS-GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
W F W A + F + +R Q+ INAV+S D +VI++ GGGKSLCYQLPA
Sbjct: 463 WDRDGFPWSDEATKILKEQFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPA 522
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
+L G+ALVVSPL+SL++DQ++ L +LGI + L + TSKE+ K + A+ + + ++L
Sbjct: 523 LLANGLALVVSPLISLVEDQILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSKFRLL 582
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK++KSK+ M+KLEK G L LI+IDE HCCSQWGHDFR DY L +LK QF
Sbjct: 583 YVTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDEVHCCSQWGHDFRTDYSFLNVLKRQFKG 642
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP++ LTATAT V +D+ +ML I+ + F + NR NL Y V +K +EIAK
Sbjct: 643 VPILGLTATATSNVLDDVKDMLGIQAALTFRAGFNRSNLKYKVVQKPGSEDECTEEIAKT 702
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+ + ++GI+YC SR +CE+VA+ L+ GI A +YHA M+ R H W K+Q
Sbjct: 703 IKRDFA-GQTGIIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQ 761
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGR 405
VIV TVAFGMGI+KP+VRFVIHHSL KS+E YYQ S R
Sbjct: 762 VIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQASAR 799
>gi|134079141|emb|CAK45953.1| unnamed protein product [Aspergillus niger]
Length = 1548
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/387 (48%), Positives = 246/387 (63%), Gaps = 16/387 (4%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP+V+
Sbjct: 698 WSKDVRNALKDRFHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSVVTSGST 757
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK--GEGELKMLY 188
G+ +V+SPLLSL+QDQV L L I A++L T KE ++I L E ++++LY
Sbjct: 758 RGVTIVISPLLSLMQDQVSHLNRLNIKAYLLNGETPKEQRQWILSTLSGSMAEEDIELLY 817
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++KS+ LEK + + +L+ I IDEAHC SQWGHDFRPDYK LG L+ Q P V
Sbjct: 818 ITPEMVNKSQAITKSLEKLNRSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRNQLPGV 877
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR K G ++ IA I
Sbjct: 878 PMMALTATATENVKVDVIHNLRMEGCEVFSQSFNRPNLTYEVRIKKK-GTELLASIADTI 936
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SY N +SGIVYC SRK CE+VA LR I A++YHA MD R K+ W +
Sbjct: 937 KTSYAN-KSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHAGMDSAERAKIQQDWQAGRTH 995
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L++ D
Sbjct: 996 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDTSTI 1055
Query: 428 SSMVF-------YENSGLQNLYDIVRY 447
SSM+ +N Q L+++V+Y
Sbjct: 1056 SSMIDKGEGSKQQKNRQRQMLHNVVQY 1082
>gi|426248114|ref|XP_004017810.1| PREDICTED: Bloom syndrome protein [Ovis aries]
Length = 1429
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 185/385 (48%), Positives = 246/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 675 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 734
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 735 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 794
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L+ IDEAHC SQWGHDFRPDYK + IL+ +FP VP+MALTATA +VQ D++
Sbjct: 795 LYERGLLARFVIDEAHCVSQWGHDFRPDYKRMNILRQKFPSVPVMALTATANPRVQKDIL 854
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 855 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKYHPH-DSGIIYCLSRR 911
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A+ L+ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 912 ECDTMAETLQNDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 971
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 972 FVIHASLPKSVEGYYQESGRAGRDGEISHCILFYAYHDVTRLKRLILMEKDGNRHTRETH 1031
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1032 FNNLYSMVHYCE-----NITECRRI 1051
>gi|167386794|ref|XP_001737905.1| ATP-dependent helicase SGS1 [Entamoeba dispar SAW760]
gi|165899114|gb|EDR25795.1| ATP-dependent helicase SGS1, putative [Entamoeba dispar SAW760]
Length = 1162
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 172/353 (48%), Positives = 230/353 (65%), Gaps = 6/353 (1%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W VFG ++R +Q+ IIN V+S + LV+M GGGKSLCYQLP+ +G
Sbjct: 427 FSWKENIKKCNNAVFGNDSFRPSQEAIINCVMSRNNALVLMPTGGGKSLCYQLPSYFIKG 486
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVT 190
I +VVSPL+SLIQDQV L G+ A S +S E+ K YK + EG+ +K ++VT
Sbjct: 487 ITVVVSPLVSLIQDQVSNLVETGMEAIAFYSGSSSEEAKQFYKESYQKEGKCTIKFVFVT 546
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPM 250
PE+I++SK F L + + ++ IDEAHC SQWGHDFR Y+ L + ++P +P+
Sbjct: 547 PERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWGHDFRDSYQKLSVFSQEYPGIPI 606
Query: 251 MALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQE 310
+ LTATAT++V+ND++ L I + + F + NR NL Y VR K+ K VIDEI + I+
Sbjct: 607 LMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTYCVRPKT---KGVIDEIEEMIKR 663
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIV 370
Y +SGI+YC S+K VAQEL +RGI + YYHA MD R KV W + VI
Sbjct: 664 KYK-GQSGIIYCLSQKNTMDVAQELNKRGIKSKYYHAGMDTKERTKVQKEWCDGEFNVIC 722
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
T+AFGMGI+KPDVRFVIHHSL KS+E YYQESGRAGRDG P++C+L++ D
Sbjct: 723 ATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGEPADCILYYNYRD 775
>gi|242013217|ref|XP_002427311.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
gi|212511652|gb|EEB14573.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
Length = 1152
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 226/634 (35%), Positives = 346/634 (54%), Gaps = 83/634 (13%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ +++NA L G D V+M GGGKSLCYQLPA++ +G+ +V+SPL SLI D
Sbjct: 403 FGLKSFRTNQLQVMNAALLGHDCFVLMPTGGGKSLCYQLPAIVSQGVTVVISPLRSLILD 462
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L L I A L+ + + IY+ L E E+K+LYVTPEK+ S + +
Sbjct: 463 QVTKLVTLDIKACHLSGDVKESEVVDIYRKLNMPEPEIKLLYVTPEKVGASTSLRNIFSR 522
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
++ L+ IDEAHC SQWGHDFRPDYK L L+ +P+V +MALTATAT +V+ D++
Sbjct: 523 LYNRNMLARFVIDEAHCVSQWGHDFRPDYKKLRELRENYPNVNIMALTATATPRVRIDIL 582
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L ++ F+S+ NR NL Y V+EK GK + +IA IQ+ + + ++GI+YCFSRK
Sbjct: 583 HQLKVKSPKWFLSSFNRSNLCYAVKEKK--GKSTLKDIAALIQQEF-SRDTGIIYCFSRK 639
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
ECE VA++L+ GI A YHA ++ R K W K++V+ T+AFGMGI+K DVR+
Sbjct: 640 ECEDVARDLKVHGIGAIPYHAGLNDTERTKAQNLWMNGKVKVVCATIAFGMGIDKLDVRY 699
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS---------G 437
V H+SL KS+E YYQESGRAGRDG + C+L++ D R ++ + S
Sbjct: 700 VFHYSLPKSIEGYYQESGRAGRDGEKATCILYYSYRDKHRMLKLINMDQSMSNMAAKKVH 759
Query: 438 LQNLYDIVRYSQ--------YPLHWNIEKV-RLVIFEKLQQVNLFCM-------VVLAGH 481
+ NLY +V +++ L++ EK R V E + C+ V +
Sbjct: 760 IDNLYRVVAFAENVTDCRRSLQLNYFGEKFDRKVCIENRETACDNCLQKGFYETVDVTAE 819
Query: 482 AQCIISLLQDI----QDNNQRLTMLQLVDKMK-IKLKEIDSD-------------LKREE 523
++ I+S ++++ + TML VD K +K+++S+ +R +
Sbjct: 820 SKAIVSAIKEVCGPDHQKHSNYTMLHFVDIFKGTGMKKVESEGHQNLPLCGMGKSWQRLD 879
Query: 524 IEQLVLQLII-----DRVLV--------------RIGPFSPGKKIIKLEISSVQKNT--A 562
E+L+ +LI+ +R++V R G I +I +K+T A
Sbjct: 880 AERLIRKLIMEEFLKERIMVKDEGMTCAYLKCGRRGDELLKGNVKIMFDIKKSKKSTPGA 939
Query: 563 DNKKSTKRSLTSSALEFELDELRKELASISGGIL------PHSVLSSQLIRLISARKPST 616
K+TK S+ + LE + ++ EL + GI P+++++ Q +R +S P T
Sbjct: 940 STSKTTKTSVDPAILEIQ-EKCYTELMDVIRGIASSLNCNPNAIMNVQALRSMSYNLPET 998
Query: 617 MEEASSNHLEKIIGKLKTG---KYGSRILEVISK 647
EE +I + T KYG+ +LE+ K
Sbjct: 999 PEEMF------LINHVTTANFEKYGNILLEITKK 1026
>gi|350631262|gb|EHA19633.1| RecQ family helicase MusN [Aspergillus niger ATCC 1015]
Length = 1452
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 189/387 (48%), Positives = 246/387 (63%), Gaps = 16/387 (4%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP+V+
Sbjct: 616 WSKDVRNALKDRFHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSVVTSGST 675
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK--GEGELKMLY 188
G+ +V+SPLLSL+QDQV L L I A++L T KE ++I L E ++++LY
Sbjct: 676 RGVTIVISPLLSLMQDQVSHLNRLNIKAYLLNGETPKEQRQWILSTLSGSLAEEDIELLY 735
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE I+KS+ LEK + + +L+ I IDEAHC SQWGHDFRPDYK LG L+ Q P V
Sbjct: 736 ITPEMINKSQAITRSLEKLNRSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRNQLPGV 795
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR K G ++ IA I
Sbjct: 796 PMMALTATATENVKVDVIHNLKMEGCEVFSQSFNRPNLTYEVRIKKK-GTELLASIADTI 854
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SY N +SGIVYC SRK CE+VA LR I A++YHA MD R K+ W +
Sbjct: 855 KTSYAN-KSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHAGMDSAERAKIQQDWQAGRTH 913
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L++ D
Sbjct: 914 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDTSTI 973
Query: 428 SSMVF-------YENSGLQNLYDIVRY 447
SSM+ +N Q L+++V+Y
Sbjct: 974 SSMIDKGEGSKQQKNRQRQMLHNVVQY 1000
>gi|383859981|ref|XP_003705470.1| PREDICTED: Bloom syndrome protein homolog [Megachile rotundata]
Length = 1362
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 236/658 (35%), Positives = 358/658 (54%), Gaps = 82/658 (12%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ + INA + G D V+M GGGKSLCYQLPA+L G+ +V+SPL SLI D
Sbjct: 637 FGLYSFRPNQLQAINAAMLGFDCFVLMPTGGGKSLCYQLPALLLPGVTIVISPLKSLILD 696
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA L+ T + IY+ L K + LK+LYVTPEKIS S++F + L
Sbjct: 697 QVQKLTSLDIPAAHLSGTITDAQADAIYRELSKKDPALKLLYVTPEKISASQKFCNLLSS 756
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L+ IDEAHC SQWGHDFRPDYK L +L+ + V M+ALTATAT +V+ D++
Sbjct: 757 LYERGLLAKFVIDEAHCVSQWGHDFRPDYKRLKMLRENYTKVGMIALTATATPRVRTDIL 816
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + + F+S+ NRPNL Y + K GK DE+ I+ Y N + GIVYC SRK
Sbjct: 817 HQLGLTRPKWFMSSFNRPNLRYSIITKK--GKNCSDEVIAMIKTKYKN-DCGIVYCLSRK 873
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC+ A ++R+ GI A YHA + N R + RW +++V+ T+AFGMGI+KP+VRF
Sbjct: 874 ECDDYAVQMRKNGIKALGYHAGLTDNNRSNIQGRWISEEIKVVCATIAFGMGIDKPNVRF 933
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS-------GLQ 439
VIH +L KS+E YYQESGRAGRDG ++C+LF+ AD+ R M+ +NS +
Sbjct: 934 VIHAALPKSIEGYYQESGRAGRDGENADCILFYNYADMHRIRKMIEMDNSNPDAIKTNID 993
Query: 440 NLYDIVRYSQYPLHWNIEKVRLV--------IFEKLQQV-------------NLFCMVVL 478
NL+ +V + + N R IF++ Q + + F M+
Sbjct: 994 NLFKMVSFCE-----NKTDCRRSLQLNYFGEIFDRQQCISNKATSCDNCRNKDDFKMLDA 1048
Query: 479 AGHAQCIISLLQDI-QDNNQRLTMLQLVDKMK-IKLKEI-DSDL------------KREE 523
A+ I+ +++I Q + LT++ L D K +K+I D+ L R +
Sbjct: 1049 TDDAKQIMKAVREITQSRSANLTLVLLTDIFKGSDIKKIRDAGLNKHPVYGRGRSWNRND 1108
Query: 524 IEQLVLQLIIDRVL--------------VRIGPFSP---GKKIIKLEISSVQKNTADNKK 566
IE+L+ +++ L ++IGP + +K IK+E+ ++ +T ++
Sbjct: 1109 IERLLHYMVLKDYLQEQMYINNEITCAYLKIGPNASELMTRKDIKVEL-PIKSSTGNSAT 1167
Query: 567 STKRSLTSSALEFELDELR----KELASISGGILPH-SVLSSQLIRLISARKPSTMEEAS 621
S + ++ L EL+ KEL + GI V +S ++ +I+ R S +
Sbjct: 1168 VATVSTVTKKIDKVLLELQERCYKELMEVIKGIAGALEVSASSIMNMIAVRAMSQRLPDN 1227
Query: 622 SNHLEKI--IGKLKTGKYGSRILEVISKCGN------SEQQHDNNAVSKEEQGRDARA 671
+ +I + + KYG +L++ K +E+Q +++A ++ G D A
Sbjct: 1228 EQAMLEIPHVTQANFDKYGKALLDITQKYAAEKYVLLNEEQAESSASDDDDGGWDNSA 1285
>gi|393247277|gb|EJD54785.1| ATP-dependent DNA helicase [Auricularia delicata TFB-10046 SS5]
Length = 819
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 194/492 (39%), Positives = 289/492 (58%), Gaps = 47/492 (9%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASR--GSPIQYGGS 61
+E+ L++++AE+ V + +L + +L ++E+ L+ + R +P+ G
Sbjct: 26 QELDARLDSLDAEIASVDAETAKLKTLRAKLVAEKAEVVQQLDNMRSGRKTNAPVGNGKG 85
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
S +++ +EW VFGI +R QQ + NA + RD++ IM GGGKSL
Sbjct: 86 KSKGGIDYNDDYEWTPDMKARMQRVFGIQDFRLCQQGVCNANMDRRDIVCIMPTGGGKSL 145
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL---- 177
YQLP++ G +V+SPL+SLI DQ++ L G+ A MLT T KED + I L
Sbjct: 146 TYQLPSLFSPGCTVVISPLISLITDQILHLREAGVEAVMLTGATRKEDTRSIMNRLISYD 205
Query: 178 ---EKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPD 234
+ GE E+K+ YVTPEK++KSK F+S LEK + GRL+ + IDEAHC SQ GHDFRPD
Sbjct: 206 PSAQSGEKEIKLCYVTPEKVAKSKTFVSMLEKLANKGRLARLVIDEAHCVSQLGHDFRPD 265
Query: 235 YKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRK-----------CIKFVSTINR 283
YK L IL+ FP VP+MAL+AT +V +D++++L + + F + + R
Sbjct: 266 YKKLSILRQLFPRVPIMALSATCPPQVLDDVLKILRLPPVTDGSAANTAGTVYFSAPLYR 325
Query: 284 PNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISAD 343
PNL Y V K S + +A YI S+ +SGIVYC S+K+ E VA L++RGI +
Sbjct: 326 PNLHYSVLPKPSGAVAALTTMADYILASHAE-DSGIVYCLSKKDTESVAMGLQERGIRSG 384
Query: 344 YYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQES 403
YHAD+ +E++H+RW K +++V+ T+AFG+GI+K DVRFV+HH++SKS+E YYQES
Sbjct: 385 IYHADIGDEEKERLHVRWRKGQVKVVCATIAFGLGIDKGDVRFVLHHTMSKSLEGYYQES 444
Query: 404 GRAGRDGLPSECLLFFRPA--------------------------DVPRQSSMVFYENSG 437
GRAGRDG ++C+LF+R A D R SS+V E G
Sbjct: 445 GRAGRDGKDADCVLFYRGAFTSAPIQAFLPRVCTGHLSIFLAVGQDATRLSSLVANEPEG 504
Query: 438 LQNLYDIVRYSQ 449
++ +++++Q
Sbjct: 505 QHKVHSMLKFAQ 516
>gi|238487580|ref|XP_002375028.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
gi|317143477|ref|XP_001819502.2| recQ family helicase MusN [Aspergillus oryzae RIB40]
gi|220699907|gb|EED56246.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
Length = 1524
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 235/352 (66%), Gaps = 9/352 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W V + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP++++
Sbjct: 687 WSKDVKSVLKDRFHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVKSGTT 746
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK--GEGELKMLY 188
G+ +V+SPLLSL+QDQV L L I A++L T K + ++I L EG +++LY
Sbjct: 747 RGVTIVISPLLSLMQDQVYHLRQLEIKAYLLNGETQKTERQWIMSTLSSSDAEGHIELLY 806
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++K++ + LE+ ++ RL+ I IDEAHC SQWGHDFRPDYK LG L+ Q P V
Sbjct: 807 ITPEMVNKNQTLIRNLERLNNRHRLARIVIDEAHCVSQWGHDFRPDYKELGGLRAQLPGV 866
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR+K G ++ IA I
Sbjct: 867 PMMALTATATENVKVDVIHNLKMEGCDIFTQSFNRPNLTYEVRQKKK-GNELLASIADTI 925
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SY N +SGIVYC SR C++VA+ LR I A++YHA M + R +V RW +
Sbjct: 926 KSSYHN-KSGIVYCLSRDTCQKVAKSLRDDYRIKAEHYHAGMKPDERAEVQQRWQAGRSH 984
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+KPDVRFVIHHSL KS+E YYQE+GRAGRDG S C +++
Sbjct: 985 VIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYY 1036
>gi|178056740|ref|NP_001116556.1| Bloom syndrome protein [Sus scrofa]
gi|168084100|dbj|BAG09489.1| Bloom syndrome protein [Sus scrofa]
Length = 1426
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 247/385 (64%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 675 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSSGVTIVISPLRSLIVD 734
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 735 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 794
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
++ L+ IDEAHC SQWGHDFRPDYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 795 LYNRKLLARFVIDEAHCVSQWGHDFRPDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 854
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 855 TQLKILRPQVFTMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHPH-DSGIIYCLSRR 911
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 912 ECDTMADTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 971
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S+CLLF+ DV R ++ E G
Sbjct: 972 FVIHASLPKSVEGYYQESGRAGRDGEISQCLLFYTYHDVTRLKRLILMEKDGNHHTKETH 1031
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1032 FNNLYSMVHYCE-----NIAECRRI 1051
>gi|451855559|gb|EMD68851.1| hypothetical protein COCSADRAFT_178603 [Cochliobolus sativus ND90Pr]
Length = 1787
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 241/366 (65%), Gaps = 12/366 (3%)
Query: 66 VENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
+N G F W + FG+ +R Q E IN L+G V+M GGGKSLCYQ
Sbjct: 838 AKNHPGMNFPWSQDLRTALIRRFGLRGFRPGQLETINTTLAGDHCFVLMPTGGGKSLCYQ 897
Query: 125 LPAVL----REGIALVVSPLLSLIQDQV-MCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
LP+V+ G+ LVVSPLLSL++DQV C G+ A ++ ++ +K I L +
Sbjct: 898 LPSVIASGKTHGVTLVVSPLLSLMEDQVEACRQRFGMQAFLINGESTAAQKKMIMDGLRE 957
Query: 180 GEGE--LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKN 237
+ + +++LYVTPE +SK++R ++ ++ H G L+ I IDEAHC SQWGHDFRPDYK
Sbjct: 958 RDPQQFIQILYVTPEMLSKNQRMINAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKA 1017
Query: 238 LGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVG 297
LG + QFP VP++ALTATAT+ V++D++ L I+ C +F + NRPNL Y V K+
Sbjct: 1018 LGDVVRQFPGVPVLALTATATKLVRSDVVSNLGIQGCREFSQSFNRPNLSYEVLPKA--- 1074
Query: 298 KVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKV 357
K +I+ IA I+E Y +SGI+YC SRK CEQVAQ+L + GI A +YHA MD R V
Sbjct: 1075 KGIINNIADLIKERY-VGKSGIIYCLSRKSCEQVAQKLSEMGIRAYHYHAGMDSADRSDV 1133
Query: 358 HMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLL 417
+W KN+ VIV T+AFGMGI+K DVR+VIHHSL KS+E YYQE+GRAGRDG SEC L
Sbjct: 1134 QRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYL 1193
Query: 418 FFRPAD 423
+++ AD
Sbjct: 1194 YYQYAD 1199
>gi|407042405|gb|EKE41307.1| recQ family helicase, putative [Entamoeba nuttalli P19]
Length = 1173
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 229/353 (64%), Gaps = 6/353 (1%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F W VFG ++R +Q+ IIN V+S + LV+M GGGKSLCYQLP+ +G
Sbjct: 435 FSWKENIKKCNNTVFGNDSFRPSQEAIINCVMSRNNALVLMPTGGGKSLCYQLPSYFIKG 494
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVT 190
I LVVSPL+SLIQDQV L G+ A S +S E+ K YK + EG+ +K ++VT
Sbjct: 495 ITLVVSPLVSLIQDQVSNLVETGMEAIAFYSGSSSEEAKQFYKESYQKEGKCTIKFVFVT 554
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPM 250
PE+I++SK F L + + ++ IDEAHC SQWGHDFR Y+ L + ++P +P+
Sbjct: 555 PERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWGHDFRDSYQKLSVFSQEYPGIPI 614
Query: 251 MALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQE 310
+ LTATAT++V+ND++ L I + + F + NR NL Y VR K+ K VIDEI + I+
Sbjct: 615 LMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTYCVRPKT---KGVIDEIEEMIKR 671
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIV 370
Y +SGI+YC S+K +AQEL +RGI + YYHA MD R V W + VI
Sbjct: 672 KYK-GQSGIIYCLSQKNTMDIAQELNKRGIKSKYYHAGMDTKERTTVQKEWCDGEFNVIC 730
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
T+AFGMGI+KPDVRFVIHHSL KS+E YYQESGRAGRDG P++C+L++ D
Sbjct: 731 ATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGEPADCILYYNYRD 783
>gi|83767361|dbj|BAE57500.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 809
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 235/352 (66%), Gaps = 9/352 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W V + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP++++
Sbjct: 240 WSKDVKSVLKDRFHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVKSGTT 299
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK--GEGELKMLY 188
G+ +V+SPLLSL+QDQV L L I A++L T K + ++I L EG +++LY
Sbjct: 300 RGVTIVISPLLSLMQDQVYHLRQLEIKAYLLNGETQKTERQWIMSTLSSSDAEGHIELLY 359
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++K++ + LE+ ++ RL+ I IDEAHC SQWGHDFRPDYK LG L+ Q P V
Sbjct: 360 ITPEMVNKNQTLIRNLERLNNRHRLARIVIDEAHCVSQWGHDFRPDYKELGGLRAQLPGV 419
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR+K G ++ IA I
Sbjct: 420 PMMALTATATENVKVDVIHNLKMEGCDIFTQSFNRPNLTYEVRQKKK-GNELLASIADTI 478
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SY N +SGIVYC SR C++VA+ LR I A++YHA M + R +V RW +
Sbjct: 479 KSSYHN-KSGIVYCLSRDTCQKVAKSLRDDYRIKAEHYHAGMKPDERAEVQQRWQAGRSH 537
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+KPDVRFVIHHSL KS+E YYQE+GRAGRDG S C +++
Sbjct: 538 VIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYY 589
>gi|225563190|gb|EEH11469.1| RecQ family helicase MusN [Ajellomyces capsulatus G186AR]
Length = 1559
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 185/394 (46%), Positives = 252/394 (63%), Gaps = 20/394 (5%)
Query: 44 LLEAFEASRGSP---IQYGGS-----SSTAVENWSGTF---EWDSRADDVRLNVFGIPAY 92
+ E FE P I +GG ++++ +N + W L+ F + +
Sbjct: 628 VAEHFENQWSGPVRNISFGGPAMRHETTSSAKNPAPELLQHPWSKDVKHALLHRFQLNGF 687
Query: 93 RANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLSLIQDQV 148
R NQ E INA LSG+D V+M GGGKSLCYQLP+V++ +G+ +V+SPLLSL++DQV
Sbjct: 688 RPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVIQSGTTKGVTVVISPLLSLMEDQV 747
Query: 149 MCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISKSKRFMSKLEK 206
L L I A +L S+E +K IY AL E +++LYVTPE ++K+ + L
Sbjct: 748 AHLKRLHIQAFLLNGDVSREGKKEIYGALRNARVEHLIQLLYVTPEMVNKNGALLDILSH 807
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H +L+ I IDEAHC SQWGHDFRPDYK LG +T+FP +P+MALTATAT+ V+ D++
Sbjct: 808 LHSRRKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTRFPGIPLMALTATATENVKVDVI 867
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L +R FV + NRPNL Y VR+K G V+D IA+ I+ SY N ++GI+YC SR+
Sbjct: 868 HNLGMRDAEVFVQSFNRPNLIYEVRQKPK-GTNVVDGIAETIKTSY-NGQAGIIYCLSRQ 925
Query: 327 ECEQVAQELRQ-RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
CE+VA++LR+ I+A +YHA + R + W K VIV T+AFGMGI+KPDVR
Sbjct: 926 SCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQSGKCSVIVATIAFGMGIDKPDVR 985
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
FVIHHS+ KS+E YYQE+GRAGRDG S C L++
Sbjct: 986 FVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYY 1019
>gi|240275770|gb|EER39283.1| RecQ family helicase MusN [Ajellomyces capsulatus H143]
Length = 1559
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/394 (46%), Positives = 252/394 (63%), Gaps = 20/394 (5%)
Query: 44 LLEAFEASRGSP---IQYGGS-----SSTAVENWSGTF---EWDSRADDVRLNVFGIPAY 92
+ E FE P I +GG ++++ +N + W L+ F + +
Sbjct: 628 VAEHFENQWSGPVRNISFGGPAMRHETTSSAKNPAPELLQHPWSKDVKHALLHRFQLNGF 687
Query: 93 RANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLSLIQDQV 148
R NQ E INA LSG+D V+M GGGKSLCYQLP+V++ +G+ +V+SPLLSL++DQV
Sbjct: 688 RPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVIQSGTTKGVTVVISPLLSLMEDQV 747
Query: 149 MCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISKSKRFMSKLEK 206
L L I A +L S+E +K IY AL E +++LYVTPE ++K+ + L
Sbjct: 748 AHLKRLHIQAFLLNGDVSREGKKEIYGALRNARVEHLIQLLYVTPEMVNKNGALLDILSH 807
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H +L+ I IDEAHC SQWGHDFRPDYK LG +T+FP +P+MALTATAT+ V+ D++
Sbjct: 808 LHSRHKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTRFPGIPLMALTATATENVKVDVI 867
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L +R FV + NRPNL Y VR+K G V+D IA+ I+ SY N ++GI+YC SR+
Sbjct: 868 HNLGMRDAEVFVQSFNRPNLIYEVRQKPK-GTNVVDGIAETIKTSY-NGQAGIIYCLSRQ 925
Query: 327 ECEQVAQELRQ-RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
CE+VA++LR+ I+A +YHA + R + W K VIV T+AFGMGI+KPDVR
Sbjct: 926 SCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQSGKCSVIVATIAFGMGIDKPDVR 985
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
FVIHHS+ KS+E YYQE+GRAGRDG S C L++
Sbjct: 986 FVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYY 1019
>gi|330932861|ref|XP_003303943.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
gi|311319743|gb|EFQ87962.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
Length = 1750
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/343 (51%), Positives = 233/343 (67%), Gaps = 11/343 (3%)
Query: 84 LNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL----REGIALVVSP 139
L+ FG+ +R Q E IN LSG V+M GGGKSLCYQLP+V+ G+ +VVSP
Sbjct: 841 LHRFGLRGFRPGQLEAINTTLSGDHCFVLMPTGGGKSLCYQLPSVIASGKTRGVTIVVSP 900
Query: 140 LLSLIQDQV-MCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISK 196
LLSL++DQV C + A ++ ++ + I AL + + + +++LYVTPE +SK
Sbjct: 901 LLSLMEDQVDACRNRFAMQAFLINGESTAAQKNMIMDALRQRDPQQFIQILYVTPEMLSK 960
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
++R +S ++ H G L+ I IDEAHC SQWGHDFRPDYK LG + QFP VP++ALTAT
Sbjct: 961 NQRMISAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKALGDVVRQFPGVPVIALTAT 1020
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
ATQ V+ D++ L I+ C ++ + NRPNL Y V K GK VI+ IA I+E Y +
Sbjct: 1021 ATQLVRTDVVANLGIQGCRQYSQSFNRPNLSYEVLPK---GKGVINSIADLIKEKY-TGK 1076
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
SGI+YC SRK CEQVAQ+L + GI A +YHA MD R +V +W KN+ VIV T+AFG
Sbjct: 1077 SGIIYCLSRKTCEQVAQKLSETGIRAYHYHAGMDSADRSEVQRKWQKNEYHVIVATIAFG 1136
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
MGI+K DVR+VIHHSL KS+E YYQE+GRAGRDG SEC L++
Sbjct: 1137 MGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLYY 1179
>gi|307195272|gb|EFN77228.1| Bloom syndrome protein-like protein [Harpegnathos saltator]
Length = 1091
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 245/675 (36%), Positives = 358/675 (53%), Gaps = 88/675 (13%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ + INA L G D V+M GGGKSLCYQLPA+L G+ +V+SPL SLI D
Sbjct: 405 FGLYTFRPNQLQAINATLVGFDCFVLMPTGGGKSLCYQLPALLSTGLTVVISPLKSLILD 464
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA L+S+ + + + +Y+ L K E LK+LYVTPEKIS S++F + +
Sbjct: 465 QVQKLISLDIPAAQLSSSVTDKQAEAVYRELCKKEPALKILYVTPEKISASQKFCNTMTT 524
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFRPDYK L L+ +P VP MALTATAT +V+ D++
Sbjct: 525 LYERDLLTRFVIDEAHCVSQWGHDFRPDYKKLKCLRKNYPKVPTMALTATATPRVRTDIL 584
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + K F+S+ NRPNL Y + K GK DE+ I+ + N GIVYC SRK
Sbjct: 585 HQLDMTKPKWFMSSFNRPNLRYSIISKK--GKNCSDEVVAMIKTKFKNV-CGIVYCLSRK 641
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+CE A L++ I A YHA + N R +W +++ VI T+AFGMGI+KP+VR+
Sbjct: 642 DCEDYAAHLKKNCIKALSYHAGLTDNQRNNCQGKWILDEIHVICATIAFGMGIDKPNVRY 701
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ------- 439
VIH +L KS+E YYQESGRAGRDG ++C+LF+ AD+ R M+ +NS Q
Sbjct: 702 VIHAALPKSIEGYYQESGRAGRDGEIADCILFYNYADMHRIRKMIEMDNSNPQVIRTHMD 761
Query: 440 NLYDIVRYSQYPLH-------------WNIEKV---RLVIFEKLQQVNLFCMVVLAGHAQ 483
NL+ +V + + +N E+ ++ + + + M+ + A+
Sbjct: 762 NLFKMVAFCENTTDCRRSLQLNYFGEVFNREQCASSKITACDNCRCKDEITMLDVTEDAK 821
Query: 484 CIISLLQDIQDNNQR---LTMLQLVDKMK-IKLKEI-DSDL------------KREEIEQ 526
++ +++I NN++ LT++ L D K LK+I +S L KR +IE+
Sbjct: 822 EVMKTVRNI--NNRKICNLTLILLTDIFKGSDLKKIRESGLNNQALYGRGKSWKRGDIER 879
Query: 527 LVLQLIIDRVL--------------VRIGPFSP---GKKIIKLEI-----SSVQKNTADN 564
L+ +++ L V+IGP + K IKL+I + A
Sbjct: 880 LLHHMVLQEYLLESMYINNEIACAYVKIGPKASELMTKNDIKLQIPIRLSDKITNGVATV 939
Query: 565 KKSTKRSLTSSALEFELDELRKELASISGGIL------PHSVLSSQLIRLISARKPSTME 618
K+T + D EL +I GI S+++ IR +S R P T E
Sbjct: 940 SKATVTKEVDGIIRELQDRCYTELMTIIRGIAGALDVSASSIMNMVAIRAMSQRLPDT-E 998
Query: 619 EASSN--HLEKI----IGKLK---TGKYGSRILEVISKCGNSEQQHDNNAVSKEEQG--- 666
EA H+ K GK T KY + + +++K EQ+ D++ S +
Sbjct: 999 EAMLQIPHVTKANFVKYGKALLDITRKYAAEKIVLLNKEKEQEQESDDDGSSWNDNNSNF 1058
Query: 667 --RDARASKRTKKEK 679
R++ S+R KK +
Sbjct: 1059 SDRNSSNSRRGKKRR 1073
>gi|307183296|gb|EFN70165.1| Bloom syndrome protein-like protein [Camponotus floridanus]
Length = 1313
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 242/637 (37%), Positives = 341/637 (53%), Gaps = 94/637 (14%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ + INA L G D V+M GGGKSLCYQLPA+L G+ +V+SPL SLI D
Sbjct: 630 FGLYTFRPNQLQAINATLLGFDCFVLMPTGGGKSLCYQLPALLSVGLTIVISPLKSLILD 689
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA L+S+ + + +Y+ L K E LK+LYVTPEKIS S + + L
Sbjct: 690 QVQKLTSLDIPAAHLSSSITDNQAEAVYRELAKKEPILKILYVTPEKISASTKLCNTLTI 749
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFRPDYK L L+ +P VP MALTATAT +V+ D++
Sbjct: 750 LYERELLARFVIDEAHCVSQWGHDFRPDYKRLKCLRDNYPKVPTMALTATATPRVRTDIL 809
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + F+S NRPNL Y + K GK DE+ I Y N+ GIVYC SRK
Sbjct: 810 HQLGMTNPKWFMSGFNRPNLRYSIITKK--GKNCSDEVIAMIMTKYRNT-CGIVYCLSRK 866
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+C+ A ++++ GI A YHA + N R RW +++ VI T+AFGMGI+KP+VRF
Sbjct: 867 DCDDYAAQMKKNGIKALSYHAGLTDNQRSNCQGRWIADEIHVICATIAFGMGIDKPNVRF 926
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ------- 439
VIH +L KS+E YYQESGRAGRDG ++C+LF+ AD+ R M+ +N Q
Sbjct: 927 VIHAALPKSIEGYYQESGRAGRDGEIADCILFYHYADMHRIRKMIELDNQSPQVIGTHMD 986
Query: 440 NLYDIVRYSQYPLHWNIEKVRLV--------IFEKLQQV--------NLFC-----MVVL 478
NL+ +V + + N R IF++ Q + N C M+ +
Sbjct: 987 NLFKMVAFCE-----NTTDCRRSLQLNYFGEIFDRQQCISNKTTACDNCRCKEEITMLDV 1041
Query: 479 AGHAQCIISLLQDIQD-NNQRLTMLQLVDKMK-IKLKEI-DSDL------------KREE 523
A+ I+ ++DI + N +LT++ L + K LK+I DS L +
Sbjct: 1042 TEDAKEIMKAVRDINNKKNCKLTLIFLANIFKGSDLKKIRDSGLTNHPLYGRGKSWNKNN 1101
Query: 524 IEQLVLQLIIDRVL--------------VRIGPFSP---GKKIIKLEISSVQKNTADNKK 566
IE+L+ +++ L ++IGP + KK K++I Q N K
Sbjct: 1102 IERLLHYMVLQEYLQENMYINNEIACAYLKIGPKASELMTKKDTKVQIPVRQSN-----K 1156
Query: 567 STKRSLTSSALEFELDELRK--------ELASISGGIL------PHSVLSSQLIRLISAR 612
ST + T S + ++D + K EL +I GI S+++ +R +S R
Sbjct: 1157 STSGTATVSIVTKKIDGIIKELQDRCYAELMTIIRGIASTLDVSASSIMNMVAVRAMSQR 1216
Query: 613 KPSTMEEASSNHLEKI--IGKLKTGKYGSRILEVISK 647
P T EEA + +I + K KYG +LE+ K
Sbjct: 1217 LPET-EEA----MLQIPHVTKANFVKYGKALLEITQK 1248
>gi|325093139|gb|EGC46449.1| RecQ family helicase MusN [Ajellomyces capsulatus H88]
Length = 1559
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/394 (46%), Positives = 252/394 (63%), Gaps = 20/394 (5%)
Query: 44 LLEAFEASRGSP---IQYGGS-----SSTAVENWSGTF---EWDSRADDVRLNVFGIPAY 92
+ E FE P I +GG ++++ +N + W L+ F + +
Sbjct: 628 VAEHFENQWSGPVRNISFGGPAMRHETTSSAKNPAPELLQHPWSKDVKHALLHRFQLNGF 687
Query: 93 RANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLSLIQDQV 148
R NQ E INA LSG+D V+M GGGKSLCYQLP+V++ +G+ +V+SPLLSL++DQV
Sbjct: 688 RPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVIQSGTTKGVTVVISPLLSLMEDQV 747
Query: 149 MCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISKSKRFMSKLEK 206
L L I A +L S+E +K IY AL E +++LYVTPE ++K+ + L
Sbjct: 748 AHLKRLHIQAFLLNGDVSREGKKEIYGALRNARVEHLIQLLYVTPEMVNKNGALLDILSH 807
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H +L+ I IDEAHC SQWGHDFRPDYK LG +T+FP +P+MALTATAT+ V+ D++
Sbjct: 808 LHSRHKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTRFPGIPLMALTATATENVKVDVI 867
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L +R FV + NRPNL Y VR+K G V+D IA+ I+ SY N ++GI+YC SR+
Sbjct: 868 HNLGMRDAEVFVQSFNRPNLIYEVRQKPK-GTNVVDGIAETIKTSY-NGQAGIIYCLSRQ 925
Query: 327 ECEQVAQELRQ-RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
CE+VA++LR+ I+A +YHA + R + W K VIV T+AFGMGI+KPDVR
Sbjct: 926 SCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQSGKCSVIVATIAFGMGIDKPDVR 985
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
FVIHHS+ KS+E YYQE+GRAGRDG S C L++
Sbjct: 986 FVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYY 1019
>gi|453080950|gb|EMF09000.1| ATP-dependent DNA helicase [Mycosphaerella populorum SO2202]
Length = 1518
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 215/572 (37%), Positives = 316/572 (55%), Gaps = 80/572 (13%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
F W D VF + +R NQ + INA LSG+DV V+M GGGKSL YQLPA+++
Sbjct: 604 FPWSQEVADRLTKVFKMKGFRENQFQAINATLSGKDVFVLMPTGGGKSLTYQLPALIQTG 663
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
G+ +VVSPLLSL+QDQV L LGI A ++ T+ ED++ + AL K E +++
Sbjct: 664 KTRGVTVVVSPLLSLMQDQVQHLKQLGIQAFLINGETTPEDKRRVMDALWKPNVEQFVQL 723
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE + KS+ + E H G+ + + IDEAHC SQWGHDFRPDYKNLG ++ +FP
Sbjct: 724 LYVTPEMLGKSENMLRAFEGLHRRGKFARLVIDEAHCVSQWGHDFRPDYKNLGEIRQRFP 783
Query: 247 DVPMMALTATATQKVQNDLMEMLHIR-----KCIKFVSTINRPNLFYMVREKSSVGKVVI 301
VP+MALTATAT +V+ D M L + KC F + NR NL+Y VR K GK I
Sbjct: 784 GVPLMALTATATTRVREDTMHNLGMEKNNPDKCQVFTQSFNRENLYYEVRPKPK-GKEGI 842
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQ-RGISADYYHADMDINAREKVHMR 360
+A I++S+P E+GI+YC SR CE +A+ L++ I A +YHA + + + V
Sbjct: 843 SAMADIIKDSHPR-ETGIIYCLSRANCEDIAKALQKTHKIRAQHYHAGLKGSEKSMVQEE 901
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W +++VIV T+AFGMGI+K +VRFVIHH++ KS+E YYQE+GRAGRDG PS C L +
Sbjct: 902 WQAGRIKVIVATIAFGMGIDKSNVRFVIHHTIPKSLEGYYQETGRAGRDGNPSRCYLLYG 961
Query: 421 PADVPRQSSMV-FYENSGLQNLYD--------IVRYSQYPLHWNIEKVRLVIF------- 464
D + M+ +N G + + D +++Y + + +V+++ +
Sbjct: 962 YGDAGKLRRMIDDPKNEGSREVKDMQHQMLRKMIQYCEN--RSDCRRVQVLSYFNERFDK 1019
Query: 465 -------EKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVD----KMKIKLK 513
+ Q + F V L A+ I+L++ ++ ++T+L +D M K K
Sbjct: 1020 ADCHGGCDNCQSESTFQEVNLTKEAEQAINLVRQVK--THKVTILHCIDVFRGGMSAKAK 1077
Query: 514 EID----------SDLKREEIEQLVLQLIIDRVLVRI---------------GP----FS 544
++ S L R ++E+L L+ + +V + GP F
Sbjct: 1078 ALNHLDLPEAGAGSHLNRGDVERLFYHLLNEEAIVEVNCVNKRGFANQYVSLGPRCMQFR 1137
Query: 545 PGKK--IIKLEISSVQKNTAD----NKKSTKR 570
PG+ I+K+ S + T + KSTKR
Sbjct: 1138 PGRTEMIMKISTSPPKDKTVNAPTKKSKSTKR 1169
>gi|391864070|gb|EIT73368.1| ATP-dependent DNA helicase [Aspergillus oryzae 3.042]
Length = 1174
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 234/352 (66%), Gaps = 9/352 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W V + F + +R NQ E I+A LSG+D V+M GGGKSLCYQLP++++
Sbjct: 337 WSKDVKSVLKDRFHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVKSGTT 396
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK--GEGELKMLY 188
G+ +V+SPLLSL+QDQV L L I A++L T K + ++I L EG +++LY
Sbjct: 397 RGVTIVISPLLSLMQDQVYHLRQLEIKAYLLNGETQKTERQWIMSTLSSSDAEGHIELLY 456
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE ++K++ LE+ ++ RL+ I IDEAHC SQWGHDFRPDYK LG L+ Q P V
Sbjct: 457 ITPEMVNKNQTLTRNLERLNNRHRLARIVIDEAHCVSQWGHDFRPDYKELGGLRAQLPGV 516
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATAT+ V+ D++ L + C F + NRPNL Y VR+K G ++ IA I
Sbjct: 517 PMMALTATATENVKVDVIHNLKMEGCDIFTQSFNRPNLTYEVRQKKK-GNELLASIADTI 575
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
+ SY N +SGIVYC SR C++VA+ LR I A++YHA M + R +V RW +
Sbjct: 576 KSSYHN-KSGIVYCLSRDTCQKVAKSLRDDYRIKAEHYHAGMKPDERAEVQQRWQAGRSH 634
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+KPDVRFVIHHSL KS+E YYQE+GRAGRDG S C +++
Sbjct: 635 VIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYY 686
>gi|320593232|gb|EFX05641.1| DNA/RNA helicase [Grosmannia clavigera kw1407]
Length = 1854
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/359 (49%), Positives = 234/359 (65%), Gaps = 11/359 (3%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
F+W + F + +R NQ E INA LSG+D V+M GGGKSLCYQLPAV+
Sbjct: 920 FDWSQEVRKALKDRFRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVISSG 979
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
G+++VVSPLLSL+QDQV L AL I A S+T K I K E L++
Sbjct: 980 RTNGVSIVVSPLLSLMQDQVDHLKALNIAASAFNSSTPAAARKHILALFSKANPEHFLQL 1039
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE +SKS +F LE + +L+ + IDEAHC SQWGHDFRPDYK LG ++ +FP
Sbjct: 1040 LYVTPEMVSKSSQFCQGLETLYRKKKLARLVIDEAHCVSQWGHDFRPDYKALGEVRRRFP 1099
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+MALTATAT V D+ L I C F + NRPNL+Y +REK GK ++ IA+
Sbjct: 1100 SVPVMALTATATPNVIVDIKHNLSIDGCKVFSQSFNRPNLYYEIREK---GKGAVENIAE 1156
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNK 365
IQ Y + ++GIVY S+K +A +LR + GISA +YHA + + + ++ W K +
Sbjct: 1157 LIQSQY-SGQTGIVYTLSQKSTVSIADKLRDKFGISAHHYHAGIPADEKTRIQRDWQKGR 1215
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++++V T+AFGMGI+KPDVRFVIHH L KS+E YYQE+GRAGRDG+ S+C L+F D+
Sbjct: 1216 IKIVVATIAFGMGIDKPDVRFVIHHYLPKSLEGYYQETGRAGRDGIHSDCFLYFSYGDI 1274
>gi|429855219|gb|ELA30187.1| RecQ family ATP-dependent DNA helicase [Colletotrichum
gloeosporioides Nara gc5]
Length = 1695
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/345 (51%), Positives = 230/345 (66%), Gaps = 11/345 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F + +R NQ E INA L+G+D V+M GGGKSLCYQLPA++ GI +VVSPLLS
Sbjct: 798 FRMRGFRPNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAIINSGKTRGITIVVSPLLS 857
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL--KMLYVTPEKISKSKRF 200
L+QDQV ++AL I A L T+ + I+ + ++ EL ++LYVTPE ++ S F
Sbjct: 858 LMQDQVDHMSALNIQAVSLNGETTSQKRNQIFSSFKERSPELFVQLLYVTPEMLNNSPSF 917
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
M L H RL+ I IDEAHC SQWGHDFRPDYK LG L+ FP VP++ALTATATQ
Sbjct: 918 MKALTTLHSGKRLARIVIDEAHCVSQWGHDFRPDYKALGKLRNHFPTVPIIALTATATQN 977
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V D+ L + C F + NRPNL Y VR K + ++ +IA IQ Y + + GI+
Sbjct: 978 VIVDIKHNLGMDNCEVFCQSFNRPNLTYEVRRKE---RELVHKIADLIQSKY-DQQCGII 1033
Query: 321 YCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
Y SRK EQVA++LR + GI A +YHA M R V +W K+++ V+V T+AFGMGI
Sbjct: 1034 YTLSRKTSEQVAEKLRDKYGILAHHYHAQMSPEDRIDVQRQWQKDRIHVVVATIAFGMGI 1093
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG PS+C+L+F DV
Sbjct: 1094 DKPDVRFVIHHSVPKSLEGYYQETGRAGRDGNPSDCILYFGYQDV 1138
>gi|119913638|ref|XP_613809.3| PREDICTED: Bloom syndrome protein [Bos taurus]
Length = 1430
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 676 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 735
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 736 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 795
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFRPDYK + IL+ +FP VP+MALTATA +VQ D++
Sbjct: 796 LYERKLLARFVIDEAHCVSQWGHDFRPDYKRMNILRQKFPSVPVMALTATANPRVQKDIL 855
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 856 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHPH-DSGIIYCLSRR 912
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A+ L+ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 913 ECDTMAETLQNDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 972
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 973 FVIHASLPKSVEGYYQESGRAGRDGEISHCILFYTYHDVTRLKRLILMEKDGNRHTRETH 1032
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1033 FNNLYSMVHYCE-----NITECRRI 1052
>gi|297487976|ref|XP_002696629.1| PREDICTED: Bloom syndrome protein [Bos taurus]
gi|296475516|tpg|DAA17631.1| TPA: Bloom syndrome, RecQ helicase-like [Bos taurus]
Length = 1430
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 676 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 735
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 736 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 795
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFRPDYK + IL+ +FP VP+MALTATA +VQ D++
Sbjct: 796 LYERKLLARFVIDEAHCVSQWGHDFRPDYKRMNILRQKFPSVPVMALTATANPRVQKDIL 855
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 856 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHPH-DSGIIYCLSRR 912
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A+ L+ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 913 ECDTMAETLQNDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 972
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 973 FVIHASLPKSVEGYYQESGRAGRDGEISHCILFYTYHDVTRLKRLILMEKDGNRHTRETH 1032
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1033 FNNLYSMVHYCE-----NITECRRI 1052
>gi|440913178|gb|ELR62661.1| Bloom syndrome protein [Bos grunniens mutus]
Length = 1430
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 676 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 735
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 736 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 795
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFRPDYK + IL+ +FP VP+MALTATA +VQ D++
Sbjct: 796 LYERKLLARFVIDEAHCVSQWGHDFRPDYKRMNILRQKFPSVPVMALTATANPRVQKDIL 855
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 856 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHPH-DSGIIYCLSRR 912
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A+ L+ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 913 ECDTMAETLQNDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 972
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 973 FVIHASLPKSVEGYYQESGRAGRDGEISHCILFYTYHDVTRLKRLILMEKDGNRHTRETH 1032
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1033 FNNLYSMVHYCE-----NITECRRI 1052
>gi|126273765|ref|XP_001368666.1| PREDICTED: Bloom syndrome protein [Monodelphis domestica]
Length = 1401
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/372 (49%), Positives = 240/372 (64%), Gaps = 12/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INAVL G D V+M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 647 FGLHHFRTNQLEAINAVLLGEDCFVLMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 706
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 707 QVQKLTSLDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 766
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VPMMALTATA +VQ D++
Sbjct: 767 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPMMALTATANPRVQKDIL 826
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I K F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 827 TQLKILKPQVFSMSFNRHNLKYSVLPKKP-KKVAFDCL-EWIRKHHPH-DSGIIYCLSRR 883
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 884 ECDTMADTLQKDGLAALSYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 943
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 944 YVIHSSLPKSVEGYYQESGRAGRDGEMSHCLLFYNYHDVTRLKRLILMEKDGNSHTRQTH 1003
Query: 438 LQNLYDIVRYSQ 449
NLY +V Y +
Sbjct: 1004 FNNLYSMVHYCE 1015
>gi|345564877|gb|EGX47836.1| hypothetical protein AOL_s00083g48 [Arthrobotrys oligospora ATCC
24927]
Length = 1720
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/420 (46%), Positives = 250/420 (59%), Gaps = 28/420 (6%)
Query: 24 IKQLVDRQDQLYERQSEL-KSLLE-----AFEASRGSPIQYGGSSSTAVENWSGTFEWDS 77
+ Q D L E EL + ++E A E + G+P S W +
Sbjct: 822 VSQFAKDHDHLNEEDVELDEDIMEIGTQKAVEVNMGAP--------------SMNHPWST 867
Query: 78 RADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGI 133
F + +RANQ E INA L G DV V+M GGGKSLCYQLPAV+ +GI
Sbjct: 868 DVARALKTTFKLKGFRANQLEAINATLGGNDVFVLMPTGGGKSLCYQLPAVVSSGKTKGI 927
Query: 134 ALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEG--ELKMLYVTP 191
V+SPLLSL++DQV L AL I A M S+ + E+ + I K L+ + +++LYVTP
Sbjct: 928 TFVISPLLSLMEDQVDHLGALKIRAFMFNSSITAEERREILKELKSPDAATSIQLLYVTP 987
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E ++ SK + + H ++ + IDEAHC SQWGHDFR DYK LG L+T VP M
Sbjct: 988 EMLASSKMMEAAMGSLHKRNLIARVVIDEAHCVSQWGHDFRKDYKELGKLRTGLRGVPFM 1047
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATAT +VQ DLM L I KC F + NRPNL Y V EK G+VV D I IQ S
Sbjct: 1048 ALTATATPQVQQDLMRNLSITKCKTFKQSFNRPNLVYEVLEKVKGGQVVQD-IINLIQTS 1106
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
Y + GIVYC S+ +CEQV+ L++ I A++YHA + + R V RW +L+VIV
Sbjct: 1107 Y-KGKCGIVYCLSKNDCEQVSSHLQKARILANFYHAGLTTDERRNVQKRWQCGELKVIVA 1165
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C LF+ D+ R M+
Sbjct: 1166 TIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKISGCYLFYSGNDMMRILKMI 1225
>gi|322801995|gb|EFZ22532.1| hypothetical protein SINV_04660 [Solenopsis invicta]
Length = 1148
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 239/636 (37%), Positives = 342/636 (53%), Gaps = 94/636 (14%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ + INA L G D ++M GGGKSLCYQLPA+L G+ +VVSPL SLI D
Sbjct: 516 FGLYTFRPNQLQAINATLLGFDCFILMPTGGGKSLCYQLPALLSIGLTVVVSPLKSLISD 575
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA L+ + ++ + IY+ L K E LK+LYVTPEKIS S + S L
Sbjct: 576 QVQKLISLDIPAAHLSGSITENQAEAIYRELSKKEPALKILYVTPEKISASPKLCSTLTN 635
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDE HC SQWGHDFRPDYK L L+ +P VP MALTATAT +V+ D++
Sbjct: 636 LYERELLARFVIDEVHCVSQWGHDFRPDYKRLRCLRDNYPKVPTMALTATATPRVRTDIL 695
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + F+S+ NRPNL Y + K GK DEI I + N+ GIVYC SRK
Sbjct: 696 HQLGMTNPKWFMSSFNRPNLRYSIIAKK--GKNCSDEIVAMIMTKFKNA-CGIVYCLSRK 752
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+C+ A ++++ GI A YHA + R +W ++++VI T+AFGMGI+KP+VRF
Sbjct: 753 DCDDYAAQMKKNGIKALSYHAGLSDVQRSNCQGKWISDEIRVICATIAFGMGIDKPNVRF 812
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ------- 439
VIH +L KS+E YYQESGRAGRDG ++C+LF+ +D+ R M+ +N Q
Sbjct: 813 VIHAALPKSIEGYYQESGRAGRDGETADCILFYNYSDMHRIRKMLELDNPSPQVINTHMD 872
Query: 440 NLYDIVRYSQYPLHWNIEKVRLV--------IFEKLQQV--------NLFC-----MVVL 478
NL+ +V + + N R IF++ Q + N C M+ +
Sbjct: 873 NLFKMVAFCE-----NSTDCRRSLQLNYFGEIFDRQQCIMNKITACDNCRCKDEITMLDV 927
Query: 479 AGHAQCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEI-DSDL------------KREEI 524
A+ I+ ++DI N ++LT++ L D K LK+I +S L + +I
Sbjct: 928 TEDAKKIMEAVRDIS-NRKKLTVVFLTDIFKGSDLKKIRESGLTKHPLYGRGKSWNKSDI 986
Query: 525 EQLVLQLIIDRVL--------------VRIGPFSP---GKKIIKLEISSVQKNTADNKKS 567
E+L+ +I+ L V IGP + KK +K++I + Q N KS
Sbjct: 987 ERLLHHMILQEYLREYMYINNEIACAYVTIGPKASELMTKKDVKVQIPTRQSN-----KS 1041
Query: 568 TKRSLTSSALEFELDELRKELA------------SISGG--ILPHSVLSSQLIRLISARK 613
T T S + ++D + KEL I+G + S+++ +R++S R
Sbjct: 1042 TSGVATVSTVTKKVDGIIKELQDRCYTELMTIIRGIAGALDVSASSIMNMVAVRVMSQRL 1101
Query: 614 PSTMEEASSNHLEKI--IGKLKTGKYGSRILEVISK 647
P T EEA + +I + K KYG +L + K
Sbjct: 1102 PET-EEA----MLQIPHVTKANFVKYGKPLLNITQK 1132
>gi|361131758|gb|EHL03410.1| putative ATP-dependent DNA helicase hus2/rqh1 [Glarea lozoyensis
74030]
Length = 855
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 176/355 (49%), Positives = 237/355 (66%), Gaps = 13/355 (3%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + FG+ +R NQ E INA L G+D ++M GGGKSLCYQLPAV++
Sbjct: 112 WSADVKKALRDRFGLRGFRQNQLEAINATLGGKDAFILMPTGGGKSLCYQLPAVVQSGKT 171
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
G+ LVVSPLLSL+ DQV L A I A +++ TSKE+ ++ ALE K E +++LY
Sbjct: 172 RGVTLVVSPLLSLMSDQVDHLKARNIQACLISGDTSKEERSIVFAALEERKPEQYIQLLY 231
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE ++ S++ S L+K H RL+ I IDEAHC SQWGHDFRPDYK+L L+ ++ V
Sbjct: 232 VTPEMVANSRKLESTLDKLHRIQRLARIVIDEAHCVSQWGHDFRPDYKSLSKLRDRYHGV 291
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P +ALTATAT+ V+ D + L + C ++ + NRPNL+Y VR K GK V +E+ K +
Sbjct: 292 PFIALTATATEAVKLDCIHNLGMTNCEQYKQSFNRPNLYYEVRTKK--GKGVSEEVLKNM 349
Query: 309 QE----SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
E Y N SGI+Y SRK CE +A++LR++GI A ++HA MD + +V W
Sbjct: 350 SELILKDYKNM-SGIIYTLSRKGCEDLAEKLREKGIRAHHFHASMDAVEKHQVQRDWQAG 408
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
K QV+V T+AFGMGI+K DVRFVIHH++ KS+E YYQE+GRAGRDG PS C L++
Sbjct: 409 KHQVVVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQETGRAGRDGKPSGCYLYY 463
>gi|310790854|gb|EFQ26387.1| RecQ family ATP-dependent DNA helicase [Glomerella graminicola
M1.001]
Length = 1602
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 182/357 (50%), Positives = 233/357 (65%), Gaps = 11/357 (3%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R+NQ E INA L+G+D V+M GGGKSLCYQLPA++
Sbjct: 697 WSADVRKALKDRFRMRGFRSNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAIISSGKT 756
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL--KMLY 188
GI +VVSPLLSL+QDQV ++AL I A L T+ + I+ + ++ EL ++LY
Sbjct: 757 RGITIVVSPLLSLMQDQVDHMSALNIQAVSLNGETNAQKRNQIFSSFKERSPELYIQLLY 816
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE ++ S+ FM L + RL+ I IDEAHC SQWGHDFRPDYK LG L+ QFP V
Sbjct: 817 VTPEMLNNSQNFMRALTNLYSNKRLARIVIDEAHCVSQWGHDFRPDYKALGKLRHQFPTV 876
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P++ALTATATQ V D+ L + C F + NRPNL Y VR K K +I +IA I
Sbjct: 877 PIIALTATATQNVIVDIKHNLGMDSCQVFSQSFNRPNLTYEVRRKE---KELIHKIADLI 933
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELR-QRGISADYYHADMDINAREKVHMRWSKNKLQ 367
Y N + GI+Y SRK EQVA++LR Q I A +YHA M R +V W +K+
Sbjct: 934 MSKY-NGQCGIIYTLSRKTSEQVAEKLRSQYNIKASHYHAQMTPEDRIRVQREWQADKIH 992
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
V+V T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG PS+C+LFF DV
Sbjct: 993 VVVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAGRDGNPSDCILFFGYQDV 1049
>gi|380491813|emb|CCF35054.1| RecQ family ATP-dependent DNA helicase [Colletotrichum higginsianum]
Length = 1601
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/352 (51%), Positives = 234/352 (66%), Gaps = 11/352 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F + +R+NQ E INA L+G+D V+M GGGKSLCYQLPA++ GI +VVSPLLS
Sbjct: 704 FRMRGFRSNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAIISSGKTRGITIVVSPLLS 763
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL--KMLYVTPEKISKSKRF 200
L+QDQV ++AL I A L T+ + I+ + ++ EL ++LYVTPE ++ S+ F
Sbjct: 764 LMQDQVDHMSALNIQAVSLNGETNAQKRNQIFSSFKERSPELYIQLLYVTPEMLNNSQNF 823
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
M L + RL+ I IDEAHC SQWGHDFRPDYK LG L+ QFP VP++ALTATATQ
Sbjct: 824 MRALTNLYVNKRLARIVIDEAHCVSQWGHDFRPDYKALGKLRHQFPTVPIIALTATATQN 883
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V D+ L + C F + NRPNL Y VR K K +I +IA I Y + + GI+
Sbjct: 884 VIVDIKHNLGMDSCQVFSQSFNRPNLTYEVRRKE---KELIHKIADLIMSKY-DGQCGII 939
Query: 321 YCFSRKECEQVAQELR-QRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
Y SRK EQVA++LR Q G+ A++YHA M R +V W +K+ V+V T+AFGMGI
Sbjct: 940 YTLSRKTSEQVAEKLRSQYGVKANHYHAQMTPEDRIRVQREWQADKIHVVVATIAFGMGI 999
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG PS+C+LFF DV M+
Sbjct: 1000 DKPDVRFVIHHSVPKSLEGYYQETGRAGRDGNPSDCILFFGYQDVATLKKMI 1051
>gi|326431575|gb|EGD77145.1| RecQ5 [Salpingoeca sp. ATCC 50818]
Length = 1451
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 225/337 (66%), Gaps = 2/337 (0%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
G+ +R NQ E NA L+GRD ++M GGGKSLCYQLPA+ ++G+ V+SPL+SLIQD
Sbjct: 716 LGLRKFRPNQLEACNAALTGRDCFILMPTGGGKSLCYQLPALTKKGVTFVISPLISLIQD 775
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L I A L ST ++ + I++ L + K++YVTPE+I+ S R ++
Sbjct: 776 QVSALRQNNIRALCLLSTQDQKTQSQIHRTLCMKDVLCKLIYVTPERIAASHRLKQTMQN 835
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G LS IDEAHC SQWGHDFRPDYK L L+ FP VPMMALTATAT++V+ D++
Sbjct: 836 LYTRGLLSRFVIDEAHCVSQWGHDFRPDYKRLSCLREWFPTVPMMALTATATKRVKRDIL 895
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + + F + NRPNLFY VR+KSS K V +EI K I+ + N + GIVYC SRK
Sbjct: 896 MNLKMTNALVFEQSFNRPNLFYEVRKKSSYKKCV-EEIGKEIRTRFRN-KCGIVYCLSRK 953
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
ECE V+Q L Q G + +YHA MD RE +W K+ ++ T+AFGMGI+KPDVRF
Sbjct: 954 ECETVSQALNQSGHKSLFYHAGMDPADREAYQDQWQSGKVNIMCATIAFGMGIDKPDVRF 1013
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
V H SL KS+E YYQE+GRAGRDG P+ C+L++ D
Sbjct: 1014 VFHFSLPKSMEGYYQEAGRAGRDGKPAVCVLYYNYGD 1050
>gi|345494123|ref|XP_001606008.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1223
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 189/460 (41%), Positives = 272/460 (59%), Gaps = 35/460 (7%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ + INA L G D ++M GGGKSLCYQLPA+L GI +VVSPL SLI D
Sbjct: 480 FGLFNFRPNQLQAINAALLGFDCFILMPTGGGKSLCYQLPALLTPGITIVVSPLKSLILD 539
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q L +L IPA ++ + IY+ + K + LK+LYVTPEK+S S++ + L
Sbjct: 540 QTQKLISLDIPAAHMSGDQTDSQTDAIYREMSKKDPVLKLLYVTPEKLSASQKLCNALTA 599
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L IDEAHC SQWGHDFRPDYK L +L+ ++P+VP MALTATAT +V+ D++
Sbjct: 600 LYERGLLGRFVIDEAHCVSQWGHDFRPDYKKLQVLRVKYPNVPTMALTATATPRVRTDIL 659
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L ++ F+S+ NRPNL Y V K GK DE+ I+ + + + GIVYC SR
Sbjct: 660 HQLGMQSPKWFMSSFNRPNLRYSVISKK--GKNASDEVIGLIKAKFKD-DCGIVYCLSRN 716
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+C+ A++++ GI A YHA + R + RW +++V+ T+AFGMGI+KP+VRF
Sbjct: 717 DCDTYAEQMKINGIKAMGYHAGLSDKQRSDIQGRWISEQIKVVCATIAFGMGIDKPNVRF 776
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV--------FYENSGL 438
VIH SL KS+E YYQESGRAGRD +EC+LF+ AD+ R M+ + + +
Sbjct: 777 VIHASLPKSIEGYYQESGRAGRDSENAECILFYNYADMYRHRKMIEMDVASNKTAQKTHM 836
Query: 439 QNLYDIVRYSQYPLHWNIEKVRLVIFEKL-----------------QQVNLFCMVVLAGH 481
NL+ +V + + ++L F +L + F ++ +
Sbjct: 837 DNLFKMVTFCENTTDCR-RALQLNYFGELFDREICIANKQTACDNCRNQGQFNVLDVTED 895
Query: 482 AQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKR 521
A+ +++L++D NN R+T+LQ+V+ K SDLKR
Sbjct: 896 AKSLVTLVRDFTKNNGRVTVLQIVEVYK------GSDLKR 929
>gi|449329518|gb|AGE95789.1| ATP-dependent DNA helicase [Encephalitozoon cuniculi]
Length = 766
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 173/354 (48%), Positives = 239/354 (67%), Gaps = 5/354 (1%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VF + +R NQ+E+I A LSG+DV V+M GGGKS+CYQLPA++ +GI +VVSPLLSL+Q
Sbjct: 232 VFKMKEFRTNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYDGITIVVSPLLSLVQ 291
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ+ L GI A + S S+ + +++ L E K+ YVTPE I+KS F L
Sbjct: 292 DQIRNLLQKGILALPINSNLSRAERDLVFQVLGGDELICKIFYVTPELIAKSGHFHDVLS 351
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
GRL IDEAHC SQWGHDFRPDYK LG ++ ++P VP++ALTATATQKV+ D+
Sbjct: 352 GLVCRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSMRARYPSVPIIALTATATQKVEMDI 411
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L IR C F + NR NL Y VR K+S ++ +IA ++Q +P+ GI+YC S+
Sbjct: 412 LENLGIRGCETFKMSFNRSNLRYEVRAKTSTVEL---DIASFVQTHFPDC-CGIIYCTSK 467
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
KECE ++++LR+ + +YHA + N R V +W++ + +VIV T+AFGMGI+K DVR
Sbjct: 468 KECEMISEKLRKY-MGTAFYHAGLSKNERNSVQEKWNRGEFKVIVATIAFGMGIDKKDVR 526
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FVIH+ + KS+E YYQE+GRAGRDGL S C+LF+ D + S M+ + G +
Sbjct: 527 FVIHYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKGDGGYE 580
>gi|332023927|gb|EGI64145.1| Bloom syndrome protein-like protein [Acromyrmex echinatior]
Length = 1254
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 236/637 (37%), Positives = 340/637 (53%), Gaps = 94/637 (14%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ + INA L G D ++M GGGKSLCYQLPA+L G+ +V+SPL SLI D
Sbjct: 525 FGLYTFRPNQLQAINATLLGFDCFILMPTGGGKSLCYQLPALLNVGLTIVISPLKSLILD 584
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA L+ + + + IY+ L K E LK+LYVTPEKIS S++F + L
Sbjct: 585 QVQKLISLDIPAAHLSGSITDNQAEAIYRELSKKEPALKILYVTPEKISASQKFCNTLTI 644
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFRPDYK L L+ +P VP MALTATAT +V+ D++
Sbjct: 645 LYERELLTRFVIDEAHCVSQWGHDFRPDYKKLKCLRNNYPKVPTMALTATATPRVRTDIL 704
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + F+S+ NRPNL Y + K GK DEI I + N+ GIVYC SRK
Sbjct: 705 HQLGMTNPKWFMSSFNRPNLRYSIISKK--GKNCSDEIVAMIMTKFKNT-CGIVYCLSRK 761
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+CE A +++ GI YHA + R +W +++ VI T+AFGMGI+KP+VRF
Sbjct: 762 DCEDYAAHMKKNGIKVLSYHAGLSDTQRSNCQGKWISDEVHVICATIAFGMGIDKPNVRF 821
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ------- 439
VIH +L KS+E+YYQESGRAGRDG ++C+LF+ AD+ R M +N Q
Sbjct: 822 VIHAALPKSIESYYQESGRAGRDGEIADCILFYHYADMHRIRKMFEQDNPNPQVISTHMD 881
Query: 440 NLYDIVRYSQ--------YPLHWNIEKVRLVIFEKLQQVNL-------------FCMVVL 478
NL+ +V + + L++ E IF++ Q ++ M+ +
Sbjct: 882 NLFKMVAFCENRTDCRRSLQLNYFGE-----IFDRQQCISNKIATCDNCRSKAEITMLDV 936
Query: 479 AGHAQCIISLLQDIQD-NNQRLTMLQLVDKMK-IKLKEI-DSDL------------KREE 523
A+ I+ ++DI + N +LT++ L D K LK+I +S L + +
Sbjct: 937 TEDAKEIMKAVRDINNRKNCKLTLVFLTDIFKGSDLKKIRESGLTNHPLYGRGKSWNKND 996
Query: 524 IEQLVLQLIIDRVL--------------VRIGPFSP---GKKIIKLEISSVQKNTADNKK 566
IE+L+ +++ L V+IGP + KK +K++I + Q N K
Sbjct: 997 IERLLHYMVLQEYLQENMYINNEIACAYVKIGPKASELMTKKDVKVQIPTRQSN-----K 1051
Query: 567 STKRSLTSSALEFELDELRK--------ELASISGGIL------PHSVLSSQLIRLISAR 612
ST T S + ++D + K EL +I GI S+++ +R +S R
Sbjct: 1052 STSGVATVSTVTKKVDGIIKELQDRCYAELMTIIRGIASALDVSASSIMNMVAVRAMSQR 1111
Query: 613 KPSTMEEASSNHLEKI--IGKLKTGKYGSRILEVISK 647
P T E + +I + K KYG +L + K
Sbjct: 1112 LPETEES-----MLQIPHVTKANFVKYGKALLNITQK 1143
>gi|345495259|ref|XP_001605753.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1426
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 173/371 (46%), Positives = 241/371 (64%), Gaps = 11/371 (2%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ + INA + G D ++M GGGKSLCYQLPA+L G+ +VVSPL SLI D
Sbjct: 674 FGLYSFRPNQLQAINAAICGYDCFILMPTGGGKSLCYQLPALLTPGVTIVVSPLKSLIID 733
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L I A L+S+ + E + +Y+ L K E LK+LY+TPEKIS S++ L
Sbjct: 734 QVQKLISLDISAAHLSSSVTDEQAQSVYRELAKKEPSLKLLYLTPEKISASQKIGDALRA 793
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L+ IDEAHC SQWGHDFRPDYK L +L+ +P VP MALTATAT +V+ D++
Sbjct: 794 LYERGMLARFVIDEAHCVSQWGHDFRPDYKKLQLLRKNYPKVPTMALTATATPRVRTDIL 853
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + F+S+ NRPNL Y+V K GK +EI + I+ + N + GIVYC SRK
Sbjct: 854 HQLGMTNPKWFMSSFNRPNLHYVVTSKK--GKNSTEEIIEMIKRDFRN-DCGIVYCLSRK 910
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+C+ A ++ GI A YHA + + R ++ RW +++V+ T+AFGMGI+KP+VRF
Sbjct: 911 DCDSFADTMKSNGIKALSYHAGLSDHQRLEIQGRWISEQIKVVCATIAFGMGIDKPNVRF 970
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG--------L 438
VIH +L KS+E YYQESGRAGRDG +EC+LF+ D+ R M+ +++ +
Sbjct: 971 VIHATLPKSIEGYYQESGRAGRDGENAECILFYHYGDMMRHRKMIEGDSTSNWEAQKTHM 1030
Query: 439 QNLYDIVRYSQ 449
NL+ IV + +
Sbjct: 1031 DNLFKIVAFCE 1041
>gi|398390493|ref|XP_003848707.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
gi|339468582|gb|EGP83683.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
Length = 1455
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 325/621 (52%), Gaps = 79/621 (12%)
Query: 5 EILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSST 64
E Q+ EN R + ++ + V E +S + SR +P + +
Sbjct: 513 EAAQDFENRGQPSRSIYQESTRTV-----FAEASGNRQSQPASGAKSRKTPKKLTAQEES 567
Query: 65 AVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
+E + +F W + + F + +R NQ + INA L+G+D V+M GGGKSLCYQ
Sbjct: 568 DLEKRNFSFPWSTDVKEALKEKFRLKGFRENQIDAINATLAGKDTFVLMPTGGGKSLCYQ 627
Query: 125 LPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LPA++R G+ +V+SPL+SL++DQV L L I A ++ S T+++ + +L
Sbjct: 628 LPALVRSGRTRGVTVVISPLVSLMEDQVQHLQKLNIQAFLVNSETTQDQRSALMDSLYSA 687
Query: 181 EGE--LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
+ E + +LYVTPE ++KS + +S + H RL+ IDEAHC SQWGHDFRPDYK L
Sbjct: 688 DVENLVHLLYVTPEMLAKSTKMVSTFQWLHRKNRLARFVIDEAHCVSQWGHDFRPDYKLL 747
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
G + F VP+MALTATAT+ V+ D + L I C F S+ NR NL+Y VR+K+ GK
Sbjct: 748 GEFRRHFMGVPVMALTATATENVRADTIHNLSIEGCEVFTSSFNRRNLYYEVRKKAK-GK 806
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELR-QRGISADYYHADMDINAREKV 357
I+ IA I+E + + ++GI+YCFSRK+CE +A+ LR Q I A +YHA + + +V
Sbjct: 807 GDIESIANLIKEDH-HKQTGIIYCFSRKDCEGMAEALRKQHSIKAHHYHAGLKSEEKSQV 865
Query: 358 HMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLL 417
+W VIV T+AFGMGI+K +VRFVIHH++ KS+E YYQE+GRAGRDGL S C L
Sbjct: 866 QKKWQAGTYHVIVATIAFGMGIDKGNVRFVIHHTIPKSLEGYYQETGRAGRDGLDSACYL 925
Query: 418 FFRPADVPRQSSMV-------------------------FYENSGLQNLYDIVRYSQYPL 452
F+ D + M+ F EN ++RY P
Sbjct: 926 FYGYGDATKVRRMIDKDDENTTSWEQKQRQHHMFRLMIQFCENKSDCRRVQVLRYFNEPF 985
Query: 453 HWNIEKVRL-VIFEKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMK-- 509
+ KV + + F V +A+ I L++ ++ ++T+L VD +
Sbjct: 986 N----KVDCEAKCDNCNSTSTFESVDFTQYARQAIELVRAVR--GSKVTVLHCVDVFRGA 1039
Query: 510 --IKLKE----------IDSDLKREEIEQLVLQLIIDRVL-------------------V 538
K+K + SDL RE+IE+L +L+ + +
Sbjct: 1040 ENAKIKSLGHNAIPQFGVGSDLSREDIERLFYRLLSEEAIREDTEVNKKGFPQSHVNIGR 1099
Query: 539 RIGPFSPGKKIIKLEISSVQK 559
+ G F PG+ + ++IS+ +
Sbjct: 1100 KAGDFRPGRTQLLMQISTTPR 1120
>gi|380011350|ref|XP_003689771.1| PREDICTED: Bloom syndrome protein homolog [Apis florea]
Length = 1167
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 230/627 (36%), Positives = 329/627 (52%), Gaps = 74/627 (11%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ + INA + G D ++M GGGKSLCYQLPA+L G+ +V+SPL SLI D
Sbjct: 481 FGLYSFRPNQLQAINAAILGFDCFILMPTGGGKSLCYQLPALLLPGVTIVISPLKSLILD 540
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA ++ + IY+ L K + LK+LYVTPEKIS S +F + L
Sbjct: 541 QVQKLTSLDIPATHMSGGITDSQALGIYRELSKKDPALKLLYVTPEKISASPKFCNILSS 600
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
++ L+ IDEAHC SQWGHDFRPDYK L L+ +P VP++ LTATAT +V++D++
Sbjct: 601 LYNRRLLARFVIDEAHCVSQWGHDFRPDYKKLNCLRENYPKVPVIVLTATATPRVRSDIL 660
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I F+S+ NRPNL Y + K S K DE+ I+ Y N + GIVYC SRK
Sbjct: 661 HQLRITTPKWFMSSFNRPNLRYSIIAKKS--KNCSDEVIAMIKTKYKN-DCGIVYCLSRK 717
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+C+ A +R+ I A YHA + N R + RW +++V+ T+AFGMGI+KP+VRF
Sbjct: 718 DCDDYAMHMRKNSIKALSYHAGLTDNNRSDIQGRWISEEIKVVCATIAFGMGIDKPNVRF 777
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------LQ 439
VIH +L KS+E YYQESGRAGRDG ++C+LF+ D+ R M+ +NS +
Sbjct: 778 VIHAALPKSIEGYYQESGRAGRDGENADCILFYNYTDMHRIRKMIELDNSNPTIIKTHID 837
Query: 440 NLYDIVRYSQYPLHWNIEKVRLV--------IFEKLQQV-------------NLFCMVVL 478
NL+ +V + + N R IF++ Q + + M+
Sbjct: 838 NLFKMVSFCE-----NKTDCRRTQQLNYFGEIFDREQCIANKVTSCDNCRSKDTITMLDA 892
Query: 479 AGHAQCIISLLQDI--QDNNQRLTMLQLVDKMK----IKLKEI----------DSDLKRE 522
A+ I+ ++DI Q N LT++ L D K K++E+ R
Sbjct: 893 TDDAKHIMKAVRDINNQTRNCNLTLVLLTDIFKGSDIKKIRELGLNKSPLYGRGKSWNRA 952
Query: 523 EIEQLVLQLIIDRVL--------------VRIGP----FSPGKKI-IKLEISSVQKNTAD 563
+I++L+ +++ L V+IGP F K I I L I S TA
Sbjct: 953 DIDRLLHHMVLKEYLQEQMYINNEIACAYVKIGPNAAEFMTKKDIKIMLPIKSSNSTTAV 1012
Query: 564 NKKSTKRSLTSSALEFELDELRKELASISGGILPH-SVLSSQLIRLISARKPSTMEEASS 622
ST L D KEL I GI V +S ++ +I+ R S + S
Sbjct: 1013 ATVSTVTKKIDKILVELQDRCYKELMEIIRGIAGALDVSASSVMNMIAIRAMSQILPDSE 1072
Query: 623 NHLEKI--IGKLKTGKYGSRILEVISK 647
+ +I + K KYG +L++ K
Sbjct: 1073 EAMLQIPHVTKANFEKYGKALLDITQK 1099
>gi|358398791|gb|EHK48142.1| hypothetical protein TRIATDRAFT_262699 [Trichoderma atroviride IMI
206040]
Length = 1621
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/356 (48%), Positives = 235/356 (66%), Gaps = 8/356 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + + F + +R NQ E INA L+G D V+M GGGKSLCYQLPAV++
Sbjct: 740 WSADVQKILKDRFRMKGFRHNQLEAINATLAGEDAFVLMPTGGGKSLCYQLPAVVKSGRT 799
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLY 188
G+ +V+SPLLSL+QDQV + ALGI A S S E ++ + A + E +++LY
Sbjct: 800 RGVTIVISPLLSLMQDQVDHMKALGIQAVAFNSECSAEYKRQVMSAFNERNPEHFIELLY 859
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPE S S +F++ + + + + IDEAHC SQWGHDFRPDYKNLG L+++FP+V
Sbjct: 860 ITPEMASNSVQFLNAMVNLYQKQKFARFVIDEAHCVSQWGHDFRPDYKNLGQLRSKFPNV 919
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATATQ V D+ L + C F + NRPNL+Y VR K S VV +IA I
Sbjct: 920 PVMALTATATQNVIVDIKYNLGMINCQVFSQSFNRPNLYYEVRPKGS-NPVVTQQIASLI 978
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
Y N +GIVY SRK+ E VA++L GI+A +YHA + + +V W K +++V
Sbjct: 979 NSKYRNV-TGIVYTISRKQAEDVAEKLSNNGIAARHYHAQITPAEKVEVQQAWQKGQIKV 1037
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V T+AFGMGI+KPDVRFV+HH + KS+E YYQE+GRAGRDG PS+C+LF+ AD+
Sbjct: 1038 VVATIAFGMGIDKPDVRFVMHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKADI 1093
>gi|346322515|gb|EGX92114.1| RecQ family helicase MusN [Cordyceps militaris CM01]
Length = 1700
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/358 (49%), Positives = 231/358 (64%), Gaps = 8/358 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
F W + + F + +R NQ E INA LSG+D V+M GGGKSLCYQLPAV+R
Sbjct: 799 FPWSPEVQRMLKDRFRMKGFRQNQLEAINATLSGQDAFVLMPTGGGKSLCYQLPAVVRTG 858
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
G+ +V+SPLLSL+QDQV + ALGI A S E ++ + A + E +++
Sbjct: 859 KTRGVTIVISPLLSLMQDQVDHMKALGIQAVAFNGECSAEYKRQVMNAFGERSPEHFIEL 918
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LY+TPE ISK+ F + L+K + G+ + + IDEAHC SQWGHDFRPDYK LG + +FP
Sbjct: 919 LYITPEMISKNMAFNAALQKLYQNGKFARLVIDEAHCVSQWGHDFRPDYKALGQARKKFP 978
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
+VP+MALTATATQ V D+ L + C F + NRPNLFY VR K + I+ IA
Sbjct: 979 NVPVMALTATATQNVIVDIRHNLGMHTCKVFSQSFNRPNLFYEVRPKGTAASS-IETIAD 1037
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
I Y +GIVY SRK E VA++L + GISA +YHA M + V +W K +
Sbjct: 1038 LIHSHY-AGLTGIVYALSRKGTENVAKKLGEAGISAYHYHAGMTPPEKVSVQKKWQKGDV 1096
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V+V T+AFGMGI+KPDVRFVIHH L KS+E YYQE+GRAGRDG PS+C+L + D+
Sbjct: 1097 KVVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGKPSDCILLYGKRDI 1154
>gi|322699139|gb|EFY90903.1| QDE3 protein [Metarhizium acridum CQMa 102]
Length = 1698
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/356 (48%), Positives = 235/356 (66%), Gaps = 8/356 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV+R
Sbjct: 821 WSPEVQKMLKDRFRMKGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRTGKT 880
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLY 188
G+ +VVSPLLSL+QDQV + ALGI A S E ++ I A + E +++LY
Sbjct: 881 RGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGGCSAEYKRQIMSAFNERSPEHFIELLY 940
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE +S + F + ++ + G+ + + IDEAHC SQWGHDFRPDYK+LG ++ +FP+V
Sbjct: 941 VTPEMVSMNPAFNNAMQTLYQRGKFARLVIDEAHCVSQWGHDFRPDYKSLGQVRMKFPEV 1000
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATATQ V D+ L++ C F + NRPNL+Y VR K+S + IA I
Sbjct: 1001 PIMALTATATQNVIVDIKHNLNMANCQVFSQSFNRPNLYYEVRTKTSNSNAT-ESIASLI 1059
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
Y N +GIVY SRK+ E+VA++L GI+A +YHA +D + +V W K ++V
Sbjct: 1060 NAKYRNI-TGIVYTISRKQAEEVARKLAGHGIAARHYHAAIDPQEKVEVQTSWQKGDIKV 1118
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V T+AFGMGI+KP+VRFV+HH L KS+E YYQE+GRAGRDG PS+C+LF+ AD+
Sbjct: 1119 VVATIAFGMGIDKPNVRFVMHHGLPKSLEGYYQETGRAGRDGKPSDCILFYGKADI 1174
>gi|119193364|ref|XP_001247288.1| hypothetical protein CIMG_01059 [Coccidioides immitis RS]
gi|392863466|gb|EAS35781.2| RecQ family ATP-dependent DNA helicase [Coccidioides immitis RS]
Length = 1569
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 220/610 (36%), Positives = 332/610 (54%), Gaps = 88/610 (14%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W + ++F + +R NQ E INA LSG+D V+M GGGKSLCYQLP+V++
Sbjct: 691 YPWSADVKAALRDIFNLRGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVVQSG 750
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKM 186
G+ +V+SPLLSL+ DQV L +L + AH + + + + I + L+ + E ++++
Sbjct: 751 RTRGVTVVISPLLSLMDDQVGQLRSLSVKAHFINGSLKAAERRQILEYLQDPRVEDQIQL 810
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE ++KS+ + L + H + + + IDEAHC SQWGHDFRPDYK LG + FP
Sbjct: 811 LYVTPEMVNKSQAMLDTLRQLHRRKKFARLVIDEAHCVSQWGHDFRPDYKELGDFRRHFP 870
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+MALTATATQ V+ D++ L + C KF + NRPNL Y VR K + + V++ IAK
Sbjct: 871 GVPLMALTATATQNVKVDVIHNLGMDGCEKFTQSFNRPNLTYEVRVKGN-HEDVLENIAK 929
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKNK 365
I Y ++GI+YC SRK CE+VA++L + + A +YHA M + R +V W K
Sbjct: 930 IIDFHY--GKTGIIYCLSRKNCEKVAKDLCTKYHVKATHYHAGMAPDDRIRVQREWQDGK 987
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
VIV T+AFGMGI+KPDVRFVIHH++ KS+E YYQE+GRAGRDG SEC LF+ DV
Sbjct: 988 HNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGKRSECFLFYGYRDVV 1047
Query: 426 RQSSMVFYENSGLQN----------LYDIVRYSQYPLHWNIEKVRLVIF--EKLQQVNLF 473
++ E +G ++ L +V++ Q + +V+++ + E ++ N
Sbjct: 1048 AIRKIIDDEKNGRKDRQQKDRQHQMLQHVVQFCQN--KSDCRRVQILAYFSENFKRENCM 1105
Query: 474 --CMVVLAG----------HAQCIISLLQDIQDNNQRLTMLQLVD--------------K 507
C +G +A + L+ +Q N R+T+L +D
Sbjct: 1106 RTCDNCQSGSKHEILDFTRYATAALKLVSRLQ--NDRVTLLYCIDVFRGINPKRFWREEH 1163
Query: 508 MKIKLKEIDSDLKREEIEQLVLQLIIDRVL---------------VRIGP----FSPGKK 548
+I+ + +DL R ++E+L +L+ + L V +GP F G++
Sbjct: 1164 TRIEEYGMGADLDRNDVERLFGKLVAEGALVERNIPNHKNMTEQFVELGPRAADFRSGRQ 1223
Query: 549 IIKLEI---SSVQKNTADNKKSTKRSLTS--SALEFELDELRKELASISGGILPHSVLSS 603
L + + +K T KS KR+L S + + +DE LP S S
Sbjct: 1224 KFTLAVRVSPNSKKLTKPLSKSQKRNLGSNVTGVRAVMDE------------LPQSTNVS 1271
Query: 604 QLIRLISARK 613
I+ +S R+
Sbjct: 1272 SPIQSVSRRR 1281
>gi|322708811|gb|EFZ00388.1| QDE3 protein [Metarhizium anisopliae ARSEF 23]
Length = 1697
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/356 (48%), Positives = 230/356 (64%), Gaps = 8/356 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E INA L G+D V+M GGGKSLCYQLPA++R
Sbjct: 821 WSPEVQKMLKDRFRMKGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAIVRTGKT 880
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLY 188
G+ +VVSPLLSL+QDQV + LGI A S E ++ I ++ E +++LY
Sbjct: 881 RGVTIVVSPLLSLMQDQVDHMKGLGIQAVAFNGGCSAEYKRQIMSTFDEPSPEHFIELLY 940
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE +S + F + ++ + G+ + + IDEAHC SQWGHDFRPDYK +G ++ +FP V
Sbjct: 941 VTPEMVSMNSAFNNAMQTLYQRGKFARLVIDEAHCVSQWGHDFRPDYKTIGQVRMRFPRV 1000
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P MALTATATQ V D+ L++ C F + NRPNL+Y VR K S + IA I
Sbjct: 1001 PFMALTATATQNVIVDIKHNLNMANCQVFSQSFNRPNLYYEVRTKKSHANAT-ESIASLI 1059
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
Y N+ +GIVY SRK+ E+VAQ L GI+A +YHA +D A+ V W K ++V
Sbjct: 1060 NAKYHNT-TGIVYTLSRKQAEEVAQTLAGYGIAARHYHAAIDPQAKVDVQRSWQKGDIKV 1118
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V T+AFGMGI+KPDVRFV+HH L KS+E YYQE+GRAGRDG PS+C+LF+ AD+
Sbjct: 1119 VVATIAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAGRDGKPSDCILFYGKADI 1174
>gi|303390001|ref|XP_003073232.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302377|gb|ADM11872.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 762
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/354 (48%), Positives = 241/354 (68%), Gaps = 5/354 (1%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VF + +R NQ+E+I A LSG+DV V+M GGGKS+CYQLPA++ EG+ +VVSPLLSL+Q
Sbjct: 228 VFKMKEFRTNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYEGVTIVVSPLLSLVQ 287
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ++ L I A + S S+ + + +++AL E K+ YVTPE I+KS F +
Sbjct: 288 DQILNLLQKDILALPINSNLSRTERRLVFEALGSDELICKIFYVTPELIAKSGHFHEVVS 347
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
GRL IDEAHC SQWGHDFRPDYK LG ++ ++P VP++ALTATAT+KV+ D+
Sbjct: 348 GLVRRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSIRRRYPSVPIIALTATATKKVELDI 407
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L IR C F + NR NL Y VR K+S ++ +I ++Q +P+ GI+YC S+
Sbjct: 408 LENLGIRGCETFKMSFNRANLRYEVRAKTSTVEL---DIVSFVQTHFPDC-CGIIYCTSK 463
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
KECE ++++L++ +A +YHA + N R V +W+K + +VIV T+AFGMGI+K DVR
Sbjct: 464 KECEMISEKLKKHMKTA-FYHAGLSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVR 522
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FVIH+ + KS+E YYQE+GRAGRDGL S C+LF+ D + S M+ + G +
Sbjct: 523 FVIHYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKGDGGYE 576
>gi|239610645|gb|EEQ87632.1| RecQ family helicase MusN [Ajellomyces dermatitidis ER-3]
gi|327348921|gb|EGE77778.1| RecQ family helicase MusN [Ajellomyces dermatitidis ATCC 18188]
Length = 1562
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/340 (51%), Positives = 232/340 (68%), Gaps = 9/340 (2%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F +P +R NQ E INA LSG+DV V+M GGGKSLCYQLP+V++ +G+ +V+SPLLS
Sbjct: 689 FNLPGFRPNQLEAINATLSGKDVFVLMPTGGGKSLCYQLPSVIQSGKTKGVTVVISPLLS 748
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISKSKRF 200
L++DQV L L I A +L SKE++ IY AL E +++LYVTPE ++K+
Sbjct: 749 LMEDQVAHLRDLKIQASVLNGDASKEEKMEIYGALRNANVEKLIQLLYVTPEMVNKNGAL 808
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ L H +L+ I IDEAHC SQWGHDFRPDYK LG +T+FP +P+MALTATAT+
Sbjct: 809 LDILSHLHSRCKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTKFPGIPLMALTATATEN 868
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V+ D++ L + FV + NRPNL Y VR K G V+ IA+ I+ SY + ++GI+
Sbjct: 869 VKVDVIHNLGMHDAEVFVQSFNRPNLIYEVRRKPK-GTNVVASIAETIKGSY-SGKAGII 926
Query: 321 YCFSRKECEQVAQELRQ-RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
YC SR+ CE+VA++LR I A +YHA + N R + W + K VIV T+AFGMGI
Sbjct: 927 YCLSRQSCERVAEQLRDTHKIKAVHYHAGLPSNDRISIQRDWQRGKYNVIVATIAFGMGI 986
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L++
Sbjct: 987 DKPDVRFVIHHSMPKSLEGYYQETGRAGRDGERSGCYLYY 1026
>gi|397569954|gb|EJK47070.1| hypothetical protein THAOC_34236, partial [Thalassiosira oceanica]
Length = 977
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/453 (41%), Positives = 276/453 (60%), Gaps = 33/453 (7%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-------EGIALVVS 138
F + ++R NQ+ I NA LSGRD VIM GGGKSL YQLPA++ I++V+S
Sbjct: 353 TFKLESFRENQEAICNATLSGRDCFVIMRTGGGKSLTYQLPALIESELDQHPRKISIVIS 412
Query: 139 PLLSLIQDQ------VMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
PL+SLI+DQ + +AL ++M ++ + + G + +++VTPE
Sbjct: 413 PLISLIRDQEEQMNAIRRGSALSFTSNMQGGSSEHARRWGLVRDPNAG---VCLIFVTPE 469
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
K+SKS + S+LEK + GRL IDE HC QWG DFRPDY LGILK FP +P++A
Sbjct: 470 KVSKSGKLKSELEKLNGQGRLGRFVIDECHCACQWGCDFRPDYAKLGILKHHFPRIPLLA 529
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
+TATA+++V+ D + + R + F ST +RPNL Y V KS + V+D++A++I+E++
Sbjct: 530 VTATASERVRVDCLAIFKSRNSLFFRSTASRPNLHYSVLAKSDNKQQVVDDMAQFIKENH 589
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
E+GI+Y FS++E + A +L +GI A YHAD+D ++++ W +N+ QV+V T
Sbjct: 590 -RVEAGIIYTFSKREANETADKLCAKGIVARAYHADVDDRRKDQIQRSWMRNETQVVVAT 648
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
+AFG+GINKPDVRFV+HHS+SK++E YYQESGRAGRDGL + C+LF+ P DV R MV
Sbjct: 649 IAFGLGINKPDVRFVLHHSISKTLEAYYQESGRAGRDGLSANCVLFYSPKDVSRLLGMVH 708
Query: 433 YENSGLQNL-YDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF---------CMVV----L 478
+ +N +VRY Q +H + + I L +VN C +
Sbjct: 709 GSSQPTRNFPRGMVRYGQ--MHGDNDLCHHTILTTLGEVNDLARERMLKAKCKTNEEREI 766
Query: 479 AGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIK 511
+AQ ++ ++ Q NN+R T+ Q+V K + K
Sbjct: 767 GRYAQTVVRIVDAHQRNNERCTLNQIVTKWRSK 799
>gi|261195180|ref|XP_002623994.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
gi|239587866|gb|EEQ70509.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
Length = 1562
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/340 (51%), Positives = 232/340 (68%), Gaps = 9/340 (2%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F +P +R NQ E INA LSG+DV V+M GGGKSLCYQLP+V++ +G+ +V+SPLLS
Sbjct: 689 FNLPGFRPNQLEAINATLSGKDVFVLMPTGGGKSLCYQLPSVIQSGKTKGVTVVISPLLS 748
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISKSKRF 200
L++DQV L L I A +L SKE++ IY AL E +++LYVTPE ++K+
Sbjct: 749 LMEDQVAHLRDLKIQASVLNGDASKEEKMEIYGALRNANVEKLIQLLYVTPEMVNKNGAL 808
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ L H +L+ I IDEAHC SQWGHDFRPDYK LG +T+FP +P+MALTATAT+
Sbjct: 809 LDILSHLHSRCKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTKFPGIPLMALTATATEN 868
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V+ D++ L + FV + NRPNL Y VR K G V+ IA+ I+ SY + ++GI+
Sbjct: 869 VKVDVIHNLGMHDAEVFVQSFNRPNLIYEVRRKPK-GTNVVASIAETIKGSY-SGKAGII 926
Query: 321 YCFSRKECEQVAQELRQ-RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
YC SR+ CE+VA++LR I A +YHA + N R + W + K VIV T+AFGMGI
Sbjct: 927 YCLSRQSCERVAEQLRDTHKIKAVHYHAGLPSNDRISIQRDWQRGKYNVIVATIAFGMGI 986
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C L++
Sbjct: 987 DKPDVRFVIHHSMPKSLEGYYQETGRAGRDGERSGCYLYY 1026
>gi|396081744|gb|AFN83359.1| ATP-dependent DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 765
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 239/354 (67%), Gaps = 5/354 (1%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VF + +R NQ+E+I A LSG+DV V+M GGGKS+CYQLPA++ EGI +VVSPLLSL+Q
Sbjct: 231 VFKMKEFRMNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYEGITIVVSPLLSLVQ 290
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ+ L I A + S S+ + +++AL E K+ YVTPE I+KS F +
Sbjct: 291 DQIRNLLQKDILALPINSNLSRNERSLVFEALRSDELICKIFYVTPELIAKSGHFHDVVS 350
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ GRL IDEAHC SQWGHDFRPDYK LG ++ ++P VP++ALTATAT+KV+ D+
Sbjct: 351 ELVRRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSIRIRYPSVPIIALTATATKKVELDI 410
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L IR C F + NR NL Y VR K+S ++ +I ++Q +P+ GI+YC S+
Sbjct: 411 LENLGIRGCETFKMSFNRSNLRYEVRAKTSTVEL---DIVSFVQTHFPDC-CGIIYCTSK 466
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
KECE ++ +L++ +A +YHA + N R V +W+K + +VIV T+AFGMGI+K DVR
Sbjct: 467 KECEMISDKLKKYMKTA-FYHAGLSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVR 525
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FVIH+ + KS+E YYQE+GRAGRDGL S C+LF+ D + S M+ + G +
Sbjct: 526 FVIHYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKGDGGYE 579
>gi|320040058|gb|EFW21992.1| RecQ helicase MUSN [Coccidioides posadasii str. Silveira]
Length = 1569
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/511 (38%), Positives = 297/511 (58%), Gaps = 52/511 (10%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W + ++F + +R NQ E INA LSG+D V+M GGGKSLCYQLP+V++
Sbjct: 691 YPWSADVKAALRDIFNLRGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVVQSG 750
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKM 186
G+ +V+SPLLSL+ DQV L +L + AH + + + + I + L+ + E ++++
Sbjct: 751 RTRGVTVVISPLLSLMDDQVGQLRSLSVKAHFINGSLKAAERRQILEYLQDPRVEDQIQL 810
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE ++KS+ + L + H + + + IDEAHC SQWGHDFRPDYK LG + FP
Sbjct: 811 LYVTPEMVNKSQAMLDTLRQLHRRKKFARLVIDEAHCVSQWGHDFRPDYKELGDFRRHFP 870
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+MALTATATQ V+ D++ L + C KF + NRPNL Y VR K + + V++ IAK
Sbjct: 871 GVPLMALTATATQNVKVDVIHNLGMDGCEKFTQSFNRPNLTYEVRVKGN-HEDVLENIAK 929
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKNK 365
I Y ++GI+YC SRK CE+VA++L + + A +YHA M + R +V W K
Sbjct: 930 IIDFHY--GKTGIIYCLSRKNCEKVAKDLCTKYHVKATHYHAGMAPDDRIRVQREWQDGK 987
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
VIV T+AFGMGI+KPDVRFVIHH++ KS+E YYQE+GRAGRDG SEC LF+ DV
Sbjct: 988 HNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGKRSECFLFYGYRDVV 1047
Query: 426 RQSSMVFYENSGLQN----------LYDIVRYSQYPLHWNIEKVRLVIF--EKLQQVNLF 473
++ E +G ++ L +V++ Q + +V+++ + E ++ N
Sbjct: 1048 AIRKIIDDEKNGRKDRQQKDRQHQMLQHVVQFCQN--KSDCRRVQILAYFSENFKRENCM 1105
Query: 474 --CMVVLAG----------HAQCIISLLQDIQDNNQRLTMLQLVD--------------K 507
C +G +A + L+ +Q N R+T+L +D
Sbjct: 1106 RTCDNCQSGSKHEILDFTRYATAALKLVSRLQ--NDRVTLLYCIDVFRGINPKRFWREEH 1163
Query: 508 MKIKLKEIDSDLKREEIEQLVLQLIIDRVLV 538
+I+ + +DL R ++E+L +L+ + LV
Sbjct: 1164 TRIEEYGMGADLDRNDVERLFGKLVAEGALV 1194
>gi|428173190|gb|EKX42094.1| BLM RecQ DNA helicase family member, partial [Guillardia theta
CCMP2712]
Length = 412
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 242/353 (68%), Gaps = 5/353 (1%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F+W + + +VF P++R +Q+EIIN +LSG D V+M GGGKSLCYQLPA++ G
Sbjct: 3 FDWTEKLRKINKHVFRNPSFRKHQEEIINTILSGHDCFVLMPTGGGKSLCYQLPALMSPG 62
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK-GEG-ELKMLYVT 190
+ +V+SPL+SL+ DQV L L I A+ +++ T + + +Y L EG +++Y+T
Sbjct: 63 VTIVISPLVSLMHDQVYNLNLLRIGAYCISANTPMSELEEMYSCLRGVKEGINCQLIYIT 122
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPM 250
PEK + S+R +++++ G+LS I IDEAHC S+WGHDFRPDYK LG LK++ P V +
Sbjct: 123 PEKFAHSQRLQNEMQRSFQNGKLSRIIIDEAHCVSEWGHDFRPDYKMLGALKSKLPGVQI 182
Query: 251 MALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQE 310
MALTATAT +V+ D+ +L I + F+ + NRPNL Y VR+K K + IA +I+E
Sbjct: 183 MALTATATPRVRRDIRNILQINEAYTFMQSFNRPNLRYEVRKKEK--KKSAENIATFIKE 240
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIV 370
+YP E+GI+YC S+ CE++A ++++ I A YHA +D R+ +WS +K VIV
Sbjct: 241 NYP-GETGIIYCLSKNRCEEMAAKMQEFKIKALPYHAGLDDQTRKFNQDQWSNDKTHVIV 299
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
T+AFGMGINKPDVRFVIH SL KS+E YYQESGRAGRDG S C+L++ +D
Sbjct: 300 ATIAFGMGINKPDVRFVIHESLPKSMEGYYQESGRAGRDGKISHCILYYSYSD 352
>gi|303312131|ref|XP_003066077.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105739|gb|EER23932.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 1310
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 198/512 (38%), Positives = 297/512 (58%), Gaps = 52/512 (10%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR- 130
+ W + ++F + +R NQ E INA LSG+D V+M GGGKSLCYQLP+V++
Sbjct: 431 NYPWSADVKAALRDIFNLRGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVVQS 490
Query: 131 ---EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELK 185
G+ +V+SPLLSL+ DQV L +L + AH + + + + I + L+ + E +++
Sbjct: 491 GRTRGVTVVISPLLSLMDDQVGQLRSLSVKAHFINGSLKAAERRQILEYLQDPRVEDQIQ 550
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPE ++KS+ + L + H + + + IDEAHC SQWGHDFRPDYK LG + F
Sbjct: 551 LLYVTPEMVNKSQAMLDTLRQLHRRKKFARLVIDEAHCVSQWGHDFRPDYKELGDFRRHF 610
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP+MALTATATQ V+ D++ L + C KF + NRPNL Y VR K + + V++ IA
Sbjct: 611 PGVPLMALTATATQNVKVDVIHNLGMDGCEKFTQSFNRPNLTYEVRVKGN-HEDVLENIA 669
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKN 364
K I Y ++GI+YC SRK CE+VA++L + + A +YHA M + R +V W
Sbjct: 670 KIIDFHY--GKTGIIYCLSRKNCEKVAKDLCTKYHVKATHYHAGMAPDDRIRVQREWQDG 727
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
K VIV T+AFGMGI+KPDVRFVIHH++ KS+E YYQE+GRAGRDG SEC LF+ DV
Sbjct: 728 KHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGKRSECFLFYGYRDV 787
Query: 425 PRQSSMVFYENSGLQN----------LYDIVRYSQYPLHWNIEKVRLVIF--EKLQQVNL 472
++ E +G ++ L +V++ Q + +V+++ + E ++ N
Sbjct: 788 VAIRKIIDDEKNGRKDRQQKDRQHQMLQHVVQFCQN--KSDCRRVQILAYFSENFKRENC 845
Query: 473 F--CMVVLAG----------HAQCIISLLQDIQDNNQRLTMLQLVD-------------- 506
C +G +A + L+ +Q N R+T+L +D
Sbjct: 846 MRTCDNCQSGSKHEILDFTRYATAALKLVSRLQ--NDRVTLLYCIDVFRGINPKRFWREE 903
Query: 507 KMKIKLKEIDSDLKREEIEQLVLQLIIDRVLV 538
+I+ + +DL R ++E+L +L+ + LV
Sbjct: 904 HTRIEEYGMGADLDRNDVERLFGKLVAEGALV 935
>gi|328778036|ref|XP_396209.4| PREDICTED: Bloom syndrome protein homolog, partial [Apis mellifera]
Length = 1179
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/438 (42%), Positives = 261/438 (59%), Gaps = 24/438 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ + INA + G D ++M GGGKSLCYQLPA+L G+ +V+SPL SLI D
Sbjct: 610 FGLYSFRPNQLQAINAAILGFDCFILMPTGGGKSLCYQLPALLLPGVTIVISPLKSLILD 669
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA ++ + IY+ L K + LK+LYVTPEKIS S +F + L
Sbjct: 670 QVQKLTSLDIPATHMSGGITDSQALGIYRELSKKDPALKLLYVTPEKISASPKFCNILSS 729
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
++ L+ IDEAHC SQWGHDFRPDYK L L+ +P VP++ LTATAT +V++D++
Sbjct: 730 LYNRRLLARFVIDEAHCVSQWGHDFRPDYKRLNCLRENYPKVPVIVLTATATPRVRSDIL 789
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I F+S+ NRPNL Y + K GK DE+ I+ Y N + GIVYC SRK
Sbjct: 790 HQLRITTPKWFMSSFNRPNLRYSIIAKK--GKNCSDEVIGMIKTKYKN-DCGIVYCLSRK 846
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+C+ A +R+ I A YHA + N R + RW +++V+ T+AFGMGI+KP+VRF
Sbjct: 847 DCDDYAMHMRKNSIKALSYHAGLTDNNRSDIQGRWISEEIKVVCATIAFGMGIDKPNVRF 906
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------LQ 439
VIH +L KS+E YYQESGRAGRDG ++C+LF+ D+ R M+ +NS +
Sbjct: 907 VIHAALPKSIEGYYQESGRAGRDGENADCILFYNYTDMHRIRKMIELDNSNPTIIKTHID 966
Query: 440 NLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQCIISLLQDIQD--NNQ 497
NL+ +V + + N R + QQ+N F + QCI + + + +
Sbjct: 967 NLFKMVSFCE-----NKTDCR-----RTQQLNYFGEIF--DREQCIANKVTSCDNCRSKD 1014
Query: 498 RLTMLQLVDKMKIKLKEI 515
+TML D K +K +
Sbjct: 1015 TITMLDATDDAKQIMKAV 1032
>gi|400595361|gb|EJP63166.1| RecQ family ATP-dependent DNA helicase [Beauveria bassiana ARSEF
2860]
Length = 1678
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 233/358 (65%), Gaps = 8/358 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
F W + + F + +R NQ E INA LSG+D V+M GGGKSLCYQLPAV+R
Sbjct: 788 FPWSPEVQRMLKDRFRMKGFRQNQLEAINATLSGQDAFVLMPTGGGKSLCYQLPAVVRTG 847
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
G+ +VVSPLLSL+QDQV + ALGI A S E ++ + + E +++
Sbjct: 848 KTRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGECSTEYKRQVMSTFGERSPEHFIEL 907
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LY+TPE ISK+ F + L++ + G+ + + IDEAHC SQWGHDFRPDYKNLG + +FP
Sbjct: 908 LYITPEMISKNMAFNNALQRLYQNGKFARLVIDEAHCVSQWGHDFRPDYKNLGQARRKFP 967
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
+VP+MALTATATQ V D+ L + C F + NRPNL+Y VR K S V + IA+
Sbjct: 968 NVPVMALTATATQNVILDIRHNLGMNTCKIFSQSFNRPNLYYEVRSKGSPVSAV-ETIAE 1026
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
I Y +GIVY SR E++A++LR++ ISA +YHA M + V RW + +
Sbjct: 1027 LIHSKY-AGLTGIVYALSRAGTEKLAEKLRKQRISAQHYHAGMTAPDKVSVQTRWQQGAV 1085
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V+V T+AFGMGI+KPDVRFVIHH L KS+E YYQE+GRAGRDG PS+C+L + D+
Sbjct: 1086 KVVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGKPSDCILLYARRDI 1143
>gi|401422966|ref|XP_003875970.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492210|emb|CBZ27484.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1687
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 204/506 (40%), Positives = 285/506 (56%), Gaps = 22/506 (4%)
Query: 57 QYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAG 116
QYGG F W + + VFG+ YR Q EI+NA + GRDV V++ G
Sbjct: 248 QYGGER----------FPWSTELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTG 297
Query: 117 GGKSLCYQLPAVLREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY 174
GGKSLCYQLPA++ + +VVSPL+SLIQDQV L A IPA LT T+ + ++
Sbjct: 298 GGKSLCYQLPALMPNPAQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLF 357
Query: 175 KALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPD 234
+ G ++YVTPE +S F+ L+ G LS IDEAHC SQWGHDFRPD
Sbjct: 358 QEWAFGHVVHTLVYVTPEYFGRSDHFVGTLQGLADKGLLSRFVIDEAHCVSQWGHDFRPD 417
Query: 235 YKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKS 294
Y+ L +LK QFP P+ ALTATAT VQ D+++ L +R I F + NR NL Y V+
Sbjct: 418 YRKLSVLKRQFPRTPITALTATATDLVQQDVIKTLALRDAIIFKGSFNRANLKYSVQHVR 477
Query: 295 SVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAR 354
GK VI + + + S GIVYC SRK+CE++A L +RGI A YYH++ ++
Sbjct: 478 --GKQVIPVVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHSEA--ASK 533
Query: 355 EKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSE 414
+ RW++++LQVI T+AFGMGINKPDVR+V+H ++ KS+E YYQESGRAGRDGLPSE
Sbjct: 534 NERQERWTRDELQVICATIAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSE 593
Query: 415 CLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNL-F 473
C+L D RQ ++ +L + R Y L+ + R + +QV++ F
Sbjct: 594 CVLLSTTTDRQRQERLIHGSKDWRASLTSLHRMLAYTLNDVDCRRRQQLHHFGEQVDVHF 653
Query: 474 CMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQLII 533
C+ A A + + QL D KL E +K ++ ++L L
Sbjct: 654 CLTQRAA-AGGGVGPPLPPASAASVSAVTQLCDNCASKLAE-GWTVKEVDVGNILLDLYA 711
Query: 534 DRVLVRIGPFSPGKKIIKLEISSVQK 559
+++R+G + K++I + SV +
Sbjct: 712 --IILRLGAMT-SKQLIGVYRGSVSE 734
>gi|383420697|gb|AFH33562.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 722 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 781
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 782 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 841
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ YP +SGI+YC SR+
Sbjct: 842 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHYP-YDSGIIYCLSRR 898
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 899 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 958
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 959 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH 1018
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1019 FNNLYSMVHYCE-----NITECRRI 1038
>gi|344284334|ref|XP_003413923.1| PREDICTED: Bloom syndrome protein [Loxodonta africana]
Length = 1429
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/385 (48%), Positives = 244/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 675 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACIAPGVTIVISPLRSLIVD 734
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 735 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 794
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 795 LYQRTLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPLVPVMALTATANPRVQKDIL 854
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I K F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 855 TQLKILKPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 911
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A+ L++ G++A YHA + AR++V +W +++ QVI TVAFGMGI+KPDVR
Sbjct: 912 ECDTMAETLKKNGLAALAYHAGLSDCARDEVQHKWINQDGCQVICATVAFGMGIDKPDVR 971
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ------ 439
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G Q
Sbjct: 972 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILTEKDGNQHTKETH 1031
Query: 440 --NLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1032 FNNLYSMVHYCE-----NITECRRI 1051
>gi|109082375|ref|XP_001097543.1| PREDICTED: Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 722 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 781
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 782 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 841
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ YP +SGI+YC SR+
Sbjct: 842 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHYP-YDSGIIYCLSRR 898
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 899 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 958
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 959 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH 1018
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1019 FNNLYSMVHYCE-----NITECRRI 1038
>gi|355692996|gb|EHH27599.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 722 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 781
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 782 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 841
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ YP +SGI+YC SR+
Sbjct: 842 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHYP-YDSGIIYCLSRR 898
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 899 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 958
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 959 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH 1018
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1019 FNNLYSMVHYCE-----NITECRRI 1038
>gi|296204062|ref|XP_002749167.1| PREDICTED: Bloom syndrome protein isoform 2 [Callithrix jacchus]
Length = 1415
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 722 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 781
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 782 LYERRLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 841
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ YP +SGI+YC SR+
Sbjct: 842 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHYP-YDSGIIYCLSRR 898
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G+SA YHA + +AR+++ +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 899 ECDTMADTLQRDGLSALAYHAGLSDSARDEIQQKWINQDGCQVICATIAFGMGIDKPDVR 958
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 959 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1018
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1019 FNNLYSMVHYCE-----NITECRRI 1038
>gi|19074536|ref|NP_586042.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
gi|19069178|emb|CAD25646.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
Length = 766
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 238/354 (67%), Gaps = 5/354 (1%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VF + +R NQ+E+I A LSG+DV V+M GGGKS+CYQLPA++ +GI +VVSPLLSL+Q
Sbjct: 232 VFKMKEFRTNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYDGITIVVSPLLSLVQ 291
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ+ L GI A + S S+ + +++ L E K+ YVTPE I+KS F L
Sbjct: 292 DQIRNLLQKGILALPINSNLSRAERDLVFQVLGGDELICKIFYVTPELIAKSGHFHDVLS 351
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
GRL IDEAHC SQWGHDFRPDYK LG ++ ++P VP++ALTATATQKV+ D+
Sbjct: 352 GLVCRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSMRARYPSVPIIALTATATQKVEMDI 411
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L IR C F + NR NL Y VR K+S ++ +IA ++Q +P+ GI+YC S+
Sbjct: 412 LENLGIRGCETFKMSFNRSNLRYEVRAKTSTVEL---DIASFVQTHFPDC-CGIIYCTSK 467
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
KECE ++++L + + +YHA + N R V +W++ + +VIV T+AFGMGI+K DVR
Sbjct: 468 KECEMISEKL-GKYMGTAFYHAGLSKNERNSVQEKWNRGEFKVIVATIAFGMGIDKKDVR 526
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FVIH+ + KS+E YYQE+GRAGRDGL S C+LF+ D + S M+ + G +
Sbjct: 527 FVIHYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKGDGGYE 580
>gi|393220095|gb|EJD05581.1| ATP-dependent DNA helicase [Fomitiporia mediterranea MF3/22]
Length = 878
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 284/495 (57%), Gaps = 40/495 (8%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS-- 61
+E+ + ++AE++ V+EQI L D Q Q+ + + L+ SR S + S
Sbjct: 37 QELNGRMSALDAELKDVKEQISDLQDLQAQILAEKQNIDQELKTLNGSRLSEVIASSSGK 96
Query: 62 ------SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAA 115
S A+ + FEW VF I ++R Q+ + NA + GRD++ IM
Sbjct: 97 GKGKAPSGGAINYMTEAFEWSGELKARMREVFSIQSFRLCQEGVCNANMDGRDIVCIMPT 156
Query: 116 GGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYK 175
GGGKSL YQLP +L G LV+SPL+SLI DQ++ L G+ A ML +TSKE+ + IY
Sbjct: 157 GGGKSLTYQLPGLLNPGCTLVISPLISLITDQILHLHEFGVEAVMLMGSTSKEESRDIYS 216
Query: 176 ALEKGEG----------ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCS 225
L E+K YVTPEKI+KSK F S LEK +AG+LS I IDEAHC S
Sbjct: 217 RLAAAANPKANRNGAVLEIKFCYVTPEKIAKSKSFTSMLEKLANAGKLSRIVIDEAHCVS 276
Query: 226 QWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIK--------- 276
Q GHDFRPDYK L IL+ FP VP++AL+AT KV DL+ L ++ +
Sbjct: 277 QLGHDFRPDYKKLSILRQLFPRVPILALSATCPPKVLKDLLLTLRLKPVVSGTAASADGT 336
Query: 277 --FVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQE 334
F + + R NL Y V K S +I ++ YI + N +SGIVYC S+K+ E VA+
Sbjct: 337 VYFSAPLYRKNLHYRVVPKPSSSNGLIKAMSDYILNHHQN-DSGIVYCMSKKDTEAVAEG 395
Query: 335 LRQRG---ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHS 391
L + I YHAD+ + +H RW + +++V+ T+AFG+GI+K DVRFV+HH
Sbjct: 396 LSKESGGKIRTGVYHADIHDRDKANLHERWRRGEVKVVCATIAFGLGIDKGDVRFVLHH- 454
Query: 392 LSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYP 451
SKS+E YYQESGRAGRDG S+CLL+FRP D R S++V E G L DI+R++
Sbjct: 455 -SKSLEGYYQESGRAGRDGRDSDCLLYFRPQDASRLSALVCGELEGQGKLRDILRFA--- 510
Query: 452 LHWNIEKVRLVIFEK 466
++E+ R + F +
Sbjct: 511 --VDVEECRKLQFAR 523
>gi|403216335|emb|CCK70832.1| hypothetical protein KNAG_0F01640 [Kazachstania naganishii CBS
8797]
Length = 1373
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 170/378 (44%), Positives = 238/378 (62%), Gaps = 10/378 (2%)
Query: 58 YGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGG 117
Y +ST N G + W + VF +P +R+NQ+E INA L G+DV V+M GG
Sbjct: 588 YANKNSTPQANPGGKYPWSGELSNKLHEVFKLPGFRSNQEEAINATLEGKDVFVLMPTGG 647
Query: 118 GKSLCYQLPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI 173
GKSLCYQLPAV+R G +V+SPL+SL+QDQV L A I A M +S + E+ +
Sbjct: 648 GKSLCYQLPAVVRSGKTRGTTIVISPLISLMQDQVEHLLARNIKACMFSSRGTAEERRQT 707
Query: 174 YKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRP 233
+ G L ++Y++PE IS S++ + K H G L+ + IDEAHC S WGHDFRP
Sbjct: 708 FNLF--IHGLLDLIYISPEMISASEQCKKAIRKLHEDGNLARVVIDEAHCVSNWGHDFRP 765
Query: 234 DYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREK 293
DYK L I K +FPD+PMMALTATA+++V+ D++ L ++ + + NR NLFY V++K
Sbjct: 766 DYKELKIFKREFPDIPMMALTATASEQVRMDIIHNLELKNPVFLKQSFNRTNLFYEVKKK 825
Query: 294 SSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINA 353
S K I EI I+ + N ++GI+YC S+ CEQ A +L++ I YYHA ++
Sbjct: 826 S---KNTIYEICDEIKRKFRN-QTGIIYCHSKNSCEQTATQLQRNRIKCAYYHAGLEPEE 881
Query: 354 REKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPS 413
R K+ W +++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S
Sbjct: 882 RFKIQKSWQTDEIQVICATVAFGMGIDKPDVRFVYHFTIPRTLEGYYQETGRAGRDGKYS 941
Query: 414 ECLLFFRPADVPRQSSMV 431
C +F D+ +M+
Sbjct: 942 YCTTYFSFRDIRNMQTMI 959
>gi|242764771|ref|XP_002340840.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
gi|218724036|gb|EED23453.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
Length = 1574
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 284/506 (56%), Gaps = 43/506 (8%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR- 130
+F W V + F + +R NQ E INA L G+D V+M GGGKSLCYQLP+V+
Sbjct: 685 SFAWSKDVRTVMRDRFHLKGFRPNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPSVIHS 744
Query: 131 ---EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK--GEGELK 185
+G+ +VVSPLLSL++DQV L LGI A + + E ++++ AL + EL+
Sbjct: 745 GRTKGVTIVVSPLLSLMEDQVDHLQKLGIKAFFINGDVTPEHKRWVMSALSSPFADRELE 804
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPE ++K+ L+ H +L+ + IDEAHC SQWGHDFRPDYK LG +++F
Sbjct: 805 LLYVTPEMVNKNLTLRDILKTLHANRKLARLVIDEAHCVSQWGHDFRPDYKELGSFRSEF 864
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P +P+MALTATAT+ V+ D++ L ++ C + NRPNL Y V K +I +IA
Sbjct: 865 PGIPVMALTATATENVKIDVINNLRMKGCEVLSQSFNRPNLTYDVLPKKGSAPDIISQIA 924
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKN 364
IQ SY ++GIVYC SRK+CE+VAQEL + I A +YHA M R V W
Sbjct: 925 DIIQTSY-KRKAGIVYCLSRKDCEKVAQELSKGYKIKATHYHAGMASAERTAVQRDWQSG 983
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
K VIV T+AFGMGI+KPDVRFVIHH++ KS+E YYQE+GRAGRDG S C LF+ D
Sbjct: 984 KYDVIVATIAFGMGIDKPDVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLFYSYRDT 1043
Query: 425 PRQSSMV-------FYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIF------------- 464
Q + +N Q L +V++ + + +V+++ +
Sbjct: 1044 AAQKRFIEQSDGDWQQKNRQRQMLRHVVQFCEN--QSDCRRVQILAYFNESFRAGDCHRT 1101
Query: 465 -EKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKE--------- 514
+ + F V + A+ I L++ D ++ +T+L +D K
Sbjct: 1102 CDNCKTDETFQTVDFSDLAKQAIQLVRLFNDRDEDVTILHCIDIFAGTFKRMKGDHAQLP 1161
Query: 515 ---IDSDLKREEIEQLVLQLIIDRVL 537
+ D++ ++E+L +L+ + +L
Sbjct: 1162 QYGVGHDIELGDVERLFFKLVGEDIL 1187
>gi|4557365|ref|NP_000048.1| Bloom syndrome protein [Homo sapiens]
gi|1705486|sp|P54132.1|BLM_HUMAN RecName: Full=Bloom syndrome protein; AltName: Full=DNA helicase,
RecQ-like type 2; Short=RecQ2; AltName: Full=RecQ
protein-like 3
gi|1072122|gb|AAA87850.1| Bloom's syndrome protein [Homo sapiens]
gi|58003498|gb|AAW62255.1| Bloom syndrome [Homo sapiens]
gi|62739395|gb|AAH93622.1| Bloom syndrome [Homo sapiens]
gi|75517719|gb|AAI01568.1| Bloom syndrome [Homo sapiens]
gi|92096020|gb|AAI15033.1| Bloom syndrome [Homo sapiens]
gi|92097932|gb|AAI15031.1| Bloom syndrome [Homo sapiens]
gi|119622513|gb|EAX02108.1| Bloom syndrome, isoform CRA_b [Homo sapiens]
Length = 1417
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 722
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 723 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 782
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 783 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 842
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 843 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 899
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 900 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 959
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 960 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1019
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1020 FNNLYSMVHYCE-----NITECRRI 1039
>gi|353234730|emb|CCA66752.1| related to RecQ family helicase RecQL1 [Piriformospora indica DSM
11827]
Length = 888
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 197/501 (39%), Positives = 295/501 (58%), Gaps = 49/501 (9%)
Query: 9 ELENVEAEVRLVQE-------QIKQLVDRQDQLYERQ------SELKSLLEAFEASR-GS 54
E+++VE+ + +QE +++++ D D L +R+ ++L E+S +
Sbjct: 29 EIQSVESNITKLQELKRTLGTELQKVEDELDDLAQRRLTGATTADLHGFSRENESSNMNA 88
Query: 55 PIQYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMA 114
G + ++ +F+W VFG ++R Q+ I NA + RDV+ +M
Sbjct: 89 RNSLSGRADQRGIDYFSSFDWSGELKKRMKRVFGFDSFRLCQEGICNASMDNRDVIAVMP 148
Query: 115 AGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY 174
GGGKSL YQLPA+L G LV+SPL+SLI DQ++ L GI A MLT + SKE+++
Sbjct: 149 TGGGKSLTYQLPALLCPGTTLVISPLISLITDQILHLHEAGIEACMLTGSASKEEQRSTL 208
Query: 175 KALE--------------KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDE 220
+ + + +GE+K++YVTPEKI+KSK F+S L+K AG L+ I IDE
Sbjct: 209 QRMTPKATNGRRISAVDGQADGEIKLVYVTPEKIAKSKSFLSVLQKMEKAGTLARIVIDE 268
Query: 221 AHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIK---- 276
AHC SQ GHDFRPDY+ L IL+ FP+VP++AL+AT V DL+++L + C+
Sbjct: 269 AHCVSQLGHDFRPDYQKLSILRQLFPNVPILALSATCPPNVLKDLLKVLKMDACVDGNNA 328
Query: 277 -------FVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECE 329
F S + R NL Y V K + VI+ + YI E++ + E+GIVYC S+K+ E
Sbjct: 329 PAKGTVYFSSPLYRENLHYKVVPKPASSAAVIETMCNYILENHKD-ETGIVYCLSKKDAE 387
Query: 330 QVAQ---ELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
VA E I YHAD+ +E++H RW K +++V+ T+AFG+GI+K DVRF
Sbjct: 388 TVAAGLVETSNGKIKTGVYHADIPDARKEELHRRWRKGEVKVVCATIAFGLGIDKGDVRF 447
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA-DVPRQSSMVFYENSGLQNLYDIV 445
++HHS+SKS++ YYQE+GRAGRDG S+C+L+ R A D R SS+V E G L+D++
Sbjct: 448 ILHHSMSKSLDGYYQETGRAGRDGKDSDCILYTRNAGDFSRLSSLVCGEKEGQSKLHDML 507
Query: 446 RYSQYPLHWNIEKVRLVIFEK 466
R+SQ ++ + R + F K
Sbjct: 508 RFSQ-----DLTECRKIQFAK 523
>gi|403258502|ref|XP_003921799.1| PREDICTED: Bloom syndrome protein [Saimiri boliviensis boliviensis]
Length = 1499
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 722 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLVSTLEN 781
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 782 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 841
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ YP +SGI+YC SR+
Sbjct: 842 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHYP-YDSGIIYCLSRR 898
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 899 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 958
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 959 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1018
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1019 FNNLYSMVHYCE-----NITECRRI 1038
>gi|358339333|dbj|GAA38465.2| bloom syndrome protein homolog [Clonorchis sinensis]
Length = 949
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 232/353 (65%), Gaps = 4/353 (1%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
+FG+ ++R NQ + INA L G D VIM GGGKSLCYQLPA +++G+ LV+SPL +L+
Sbjct: 212 LFGLKSFRRNQLQAINAALLGLDCFVIMPTGGGKSLCYQLPAAVQDGLTLVISPLKALVL 271
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV + +LGI A LT + + +Y +L K+LYVTPEKI+ S + LE
Sbjct: 272 DQVTKMQSLGIVAAHLTGEATMTESDRVYASLHLATLRTKLLYVTPEKIAASDKLKGCLE 331
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ + L IDEAHC SQWGHDFRPDY+NL IL+T FP VPMMA+TATAT +V+ D+
Sbjct: 332 QLYRRNLLQRFVIDEAHCVSQWGHDFRPDYRNLSILRTNFPKVPMMAMTATATPRVREDI 391
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L ++ F+ + NR NL + VR K K EI + I +P SGIVYC SR
Sbjct: 392 LHQLKMKNTKWFIQSFNRTNLKFEVRPKKL--KSCTKEIIEVIHSEFPR-RSGIVYCLSR 448
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDV 384
+EC+ VA+EL + G++A YHA M R ++ W ++K +++ T+AFGMGI+KPDV
Sbjct: 449 RECDLVAEELSRAGLAASAYHAGMTDAQRRRIQEAWIQEDKCKIVCATIAFGMGIDKPDV 508
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG 437
RFVIHHSL KS+E YYQE+GR+GRDGLP+ C+L++ DV R ++ + G
Sbjct: 509 RFVIHHSLPKSIEGYYQEAGRSGRDGLPATCILYYHWHDVVRLRKLIQGDTPG 561
>gi|225681066|gb|EEH19350.1| ATP-dependent DNA helicase hus2/rqh1 [Paracoccidioides brasiliensis
Pb03]
Length = 1550
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 174/354 (49%), Positives = 231/354 (65%), Gaps = 9/354 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W L+ FG+ +R NQ E INA LSG+D V+M GGGKSLCYQLPAV+
Sbjct: 678 YPWSKDVKSALLHRFGLSGFRLNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVNSG 737
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
+G+ +V+SPLLSL++DQV L L I A +L +KE + IY AL E +++
Sbjct: 738 TTKGVTVVISPLLSLMEDQVAHLKELHIQAFLLNGDVNKEHKSLIYSALANPNVEKLIQL 797
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE ++K+ + L + H +L+ I IDEAHC SQWGHDFRPDYK LG + +FP
Sbjct: 798 LYVTPEMVNKNGALLGALSRLHSRKKLARIVIDEAHCVSQWGHDFRPDYKELGNTRAKFP 857
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
+P+MALTATAT+ V+ D++ L +R FV + NRPNL Y VR K VI+ IA+
Sbjct: 858 GIPLMALTATATENVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPK-NTNVIESIAE 916
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNK 365
I ESY + ++GI+YC SR+ CE+VA +LR + I A +YHA + R + W K
Sbjct: 917 TINESY-SGQAGIIYCLSRRSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSGK 975
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+K DVRFVIHH++ KS+E YYQE+GRAGRDG S C L++
Sbjct: 976 YNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLYY 1029
>gi|348506232|ref|XP_003440664.1| PREDICTED: Bloom syndrome protein homolog [Oreochromis niloticus]
Length = 1403
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 205/501 (40%), Positives = 284/501 (56%), Gaps = 57/501 (11%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D V+M GGGKSLCYQLPA + G+ +VVSPL SLI D
Sbjct: 654 FGLHQFRFNQLEAINAALLGEDAFVLMPTGGGKSLCYQLPACVSLGVTVVVSPLKSLIVD 713
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L L IPA L+ S + IY L + + +K+LYVTPEK+S S R +S L+
Sbjct: 714 QVQKLTTLDIPATSLSGDKSDSEASRIYMQLSRKDPIIKLLYVTPEKLSASNRLISALQN 773
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L+ IDEAHC SQWGHDFRPDYK L L+ +FP+V MMALTATAT +VQ D++
Sbjct: 774 LYERGLLARFIIDEAHCVSQWGHDFRPDYKKLHELRQKFPNVAMMALTATATPRVQKDIL 833
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L++ + F + NR NL Y V K K V ++ +I++ YP +SGIVYC SR
Sbjct: 834 NQLNMSRPQVFTMSFNRTNLKYAVLPKKP--KKVDEDCTSWIKKHYPR-DSGIVYCLSRN 890
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
+C+ +A+ L++ G+SA YHA + + RE V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 891 DCDAMAESLQRAGLSALSYHAGLSDSDREYVQSKWINQDGCQVICATIAFGMGIDKPDVR 950
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KS+E YYQESGRAGRDG S C+LF+ DV R ++ + G
Sbjct: 951 YVIHASLPKSMEGYYQESGRAGRDGEISHCILFYSYTDVQRIKRIISMDREGDRHTKATH 1010
Query: 438 LQNLYDIVRYSQYPLHWNIEKVR----LVIFEKLQQVNLFC------------------M 475
NL+ +V + + N+ + R L F +L+ FC M
Sbjct: 1011 YNNLHSMVHFCE-----NVMECRRIQLLAYFGELKFNRNFCKDHPDVSCDNCTKPNQYKM 1065
Query: 476 VVLAGHAQCIISLLQDIQD----------NNQRLTMLQLVD--------KMKIKLKEIDS 517
+ + I+ +Q+ + N RLT+ LVD K++ + I +
Sbjct: 1066 RNVTEDVKKIVRFVQENCEKVGARFGKTANQNRLTLNMLVDIFIGSKAAKVQTGMFGIGA 1125
Query: 518 DLKREEIEQLVLQLIIDRVLV 538
R ++L +L++D VLV
Sbjct: 1126 AYSRHNADRLFKKLVLDNVLV 1146
>gi|270010585|gb|EFA07033.1| hypothetical protein TcasGA2_TC010005 [Tribolium castaneum]
Length = 1017
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 200/497 (40%), Positives = 292/497 (58%), Gaps = 44/497 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R +Q+EIINA L+ +D V+M GGGKSLCYQLPAVL G+ +V+SPL +LI D
Sbjct: 292 FGLRHFRPHQEEIINASLTQQDCFVLMPTGGGKSLCYQLPAVLMPGVTIVISPLRALISD 351
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L AL IP+ L S K D I++ L E LK+LY+TPEK+S S + ++
Sbjct: 352 QVDKLNALDIPSAHLCSDVKKADVDVIFQKLHVREPILKLLYLTPEKMSASGKVTDMIKS 411
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +L+ IDE HC SQWGHDFRPDYK L L+ Q+P+VP++ LTATAT++VQ D+
Sbjct: 412 LYARNKLARFVIDEVHCLSQWGHDFRPDYKQLSNLRKQYPEVPIICLTATATKQVQGDVT 471
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
+L ++ F+ + NRPN+ Y V K+ + V++EI K I++ + +SGI+YC R
Sbjct: 472 NILGLKNPKTFIRSFNRPNIKYRVIPKNGIK--VVEEITKLIKQRF-YRKSGIIYCLCRA 528
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+CE++A++L + GI A YHA M + REK W +++ VIV T+AFGMGI+KPDVRF
Sbjct: 529 DCEKLAEDLCKLGIKAKAYHAGMSDSIREKQQREWMQDQFHVIVATIAFGMGIDKPDVRF 588
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV-------------FY 433
VIH+S+ KSVE +YQESGRAGRDG PS LF+ AD R ++ Y
Sbjct: 589 VIHNSMPKSVEAFYQESGRAGRDGEPSYSYLFYSYADAGRLKRLMQMDRGVNKNALHGHY 648
Query: 434 EN-----SGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVV-------LAGH 481
EN S +N+ D RY Q +H + R + E + C + +
Sbjct: 649 ENLYQMVSFCENIVDCRRYLQL-IHLGEKFDRKICMENKAMMCDNCENIKNNKLSDVTKE 707
Query: 482 AQCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEI-------------DSDLKREEIEQL 527
A+ + L+ D+ + +T+L + D K KLK+I S L R +I+++
Sbjct: 708 ARELGQLVHDLA-RLENVTLLYVADVYKGSKLKKIVEKRHDQHRFYGGGSSLDRVDIQRI 766
Query: 528 VLQLIIDRVLVRIGPFS 544
++ L++ ++L F+
Sbjct: 767 LINLVLRKILTDFCTFN 783
>gi|256081389|ref|XP_002576953.1| DNA helicase recq1 [Schistosoma mansoni]
gi|353232363|emb|CCD79718.1| putative dna helicase recq1 [Schistosoma mansoni]
Length = 652
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 199/473 (42%), Positives = 285/473 (60%), Gaps = 29/473 (6%)
Query: 3 TEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSS 62
T+ I + L++++ + + +QI +L ++ L + +LKS L +R I
Sbjct: 8 TQGIQETLKSLKKNIDSITKQIDELNHQRKNLQVQYDQLKSQLTT---ARVQEISNSLDK 64
Query: 63 STAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
S+ N F W S + VR VF I +R Q INAVL GRDV+++M G GKSL
Sbjct: 65 SSEY-NSESLFPWTSEVNRVRKEVFQISEFRPLQITAINAVLDGRDVILVMPTGAGKSLV 123
Query: 123 YQLPAVL-----------REGIALVVSPLLSLIQDQVMCLAALGIPAH---MLTSTTSKE 168
YQLPA+L R + LV+SPL+SL+ DQ + L + +L + T +
Sbjct: 124 YQLPALLNVNAFKVNGRYRGSLTLVISPLVSLMVDQSINLTRYSLEPDTIAVLDANTPLQ 183
Query: 169 DEKFIYKALEK--------GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDE 220
+++ I L + + L++LYVTPEK++KSK +++LE + RL+ I+IDE
Sbjct: 184 EQRRILSLLAEKPSKTNASTKSNLRLLYVTPEKLAKSKLLLNRLEIVYSTNRLACIAIDE 243
Query: 221 AHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEML--HIRKCIKFV 278
HC SQWGHDFRPDYK L IL+ QF +VP++ LTATAT ++ D+ ML ++ KC+
Sbjct: 244 VHCASQWGHDFRPDYKFLHILRRQFSNVPIIGLTATATTEIIVDIENMLGLNVDKCLVLR 303
Query: 279 STINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR 338
++ NR NL Y V+ S K + + + I ++Y N +SGIVYCFS+K+ E V+ EL+
Sbjct: 304 TSYNRENLNYYVKPVSGSIKASVKYLYELINKNYIN-QSGIVYCFSQKDTEDVSSELKNF 362
Query: 339 GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVET 398
G+ YHA++D N R VH WS+ K+QVIV TVAFGMGI+K DVRFVIH S SKS+E
Sbjct: 363 GLKVAPYHANLDFNYRSTVHSGWSQGKIQVIVATVAFGMGIDKADVRFVIHFSSSKSLEN 422
Query: 399 YYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYP 451
YYQESGRAGRD ++C+L +R +D+ R +SMV E +G+ LY +V Y P
Sbjct: 423 YYQESGRAGRDSNSADCILMWRFSDLFRLASMVSSERTGIAKLYQMVGYCIDP 475
>gi|345798304|ref|XP_003434427.1| PREDICTED: Bloom syndrome protein [Canis lupus familiaris]
Length = 1420
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 244/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 665 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 724
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 725 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLLSTLEN 784
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 785 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 844
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 845 TQLKILQPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKYHPH-DSGIIYCLSRR 901
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 902 ECDTMADTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 961
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 962 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILMEKDGNRHTRETH 1021
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1022 FNNLYSMVHYCE-----NITECRRI 1041
>gi|366995175|ref|XP_003677351.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
gi|342303220|emb|CCC70998.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
Length = 989
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 183/428 (42%), Positives = 257/428 (60%), Gaps = 28/428 (6%)
Query: 71 GTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR 130
F W D + F +P +R NQ E IN+ LSG+DV V+M GGGKSLCYQLPAV++
Sbjct: 330 NNFPWTPEVDYRLHHTFKLPGFRPNQLEAINSTLSGKDVFVLMPTGGGKSLCYQLPAVVK 389
Query: 131 ----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKM 186
+G +V+SPL+SL+QDQV L L I A M++S + + K + KG L +
Sbjct: 390 SGRTKGTTIVISPLISLMQDQVAHLLDLNIKASMISSKGTTQQRKQTFNLFVKGL--LDL 447
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
+Y++PE IS SK+ ++ + G+L+ I +DEAHC S WGHDFRPDYK L K ++P
Sbjct: 448 IYISPEMISASKQCKRAIQTLYQQGKLARIVVDEAHCVSSWGHDFRPDYKQLNFFKNEYP 507
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
++PMMALTATA + V+ D+++ L +R + + NR NLFY VR+K+ K + EIA
Sbjct: 508 NIPMMALTATANEHVRKDIIQNLQLRSPLFLKQSFNRINLFYEVRKKT---KDCMVEIAD 564
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
I+ + +SGI+YC S+ CEQV+ L+ + I + +YHA MD N R + W NKL
Sbjct: 565 AIKFQF-TGQSGIIYCHSKNSCEQVSAYLQSKQIRSGFYHAGMDANERLMIQQDWQANKL 623
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG PS C+ ++ DV
Sbjct: 624 QVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKPSYCITYYSFKDVRT 683
Query: 427 QSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQCII 486
M+ Q D+ R N EK F+KLQQV +C + + ++
Sbjct: 684 IQKMI-------QRDKDLDRA-------NKEKH----FDKLQQVMSYCDNIHECRRKLVL 725
Query: 487 SLLQDIQD 494
S + D
Sbjct: 726 SYFNEAFD 733
>gi|295673364|ref|XP_002797228.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282600|gb|EEH38166.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1550
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 175/354 (49%), Positives = 230/354 (64%), Gaps = 9/354 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W L+ FG+ +R NQ E INA LSG+D V+M GGGKSLCYQLPAV+
Sbjct: 677 YPWSKDVKSALLHRFGLSGFRLNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVNSG 736
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
+G+ +V+SPLLSL++DQV L L I A +L SKE + IY AL E +++
Sbjct: 737 TTKGVTVVISPLLSLMEDQVAHLKELHIQAFLLNGDVSKEHKSLIYSALANPNVEKLIQL 796
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE ++K+ + L H +L+ I IDEAHC SQWGHDFRPDYK LG + +FP
Sbjct: 797 LYVTPEMVNKNGALLGALSHLHSRKKLARIVIDEAHCVSQWGHDFRPDYKELGNTRAKFP 856
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
+P+MALTATAT+ V+ D++ L +R FV + NRPNL Y VR K VI+ IA+
Sbjct: 857 GIPLMALTATATENVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPK-NTNVIESIAE 915
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNK 365
I ESY + ++GI+YC SR+ CE+VA +LR + I A +YHA + R + W K
Sbjct: 916 TINESY-SGQAGIIYCLSRQSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSGK 974
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+K DVRFVIHH++ KS+E YYQE+GRAGRDG S C L++
Sbjct: 975 YNVIVATIAFGMGIDKADVRFVIHHTIPKSLEGYYQETGRAGRDGKRSGCYLYY 1028
>gi|389601408|ref|XP_001565398.2| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|322505030|emb|CAM42308.2| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 2031
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 283/504 (56%), Gaps = 22/504 (4%)
Query: 57 QYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAG 116
QYGG F W + + VFG+ YR Q EI+NA + GRDV V++ G
Sbjct: 514 QYGGER----------FPWSTELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTG 563
Query: 117 GGKSLCYQLPAVLREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY 174
GGKSLCYQLPA++ + +VVSPL+SLIQDQV L A IPA LT T+ + ++
Sbjct: 564 GGKSLCYQLPALMPNPAQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLF 623
Query: 175 KALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPD 234
+ G ++YVTPE +S F+ L+ G L IDEAHC SQWGHDFRPD
Sbjct: 624 QEWASGHVVHTLVYVTPEYFGRSDHFVGTLQGLTDKGLLCRFVIDEAHCVSQWGHDFRPD 683
Query: 235 YKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKS 294
Y+ L +LK QFP P+ ALTATAT VQ D+++ L +R I F + NR NL Y V+
Sbjct: 684 YRKLSVLKRQFPRTPITALTATATDVVQQDVIKTLALRNAIIFKGSFNRANLKYSVQHVR 743
Query: 295 SVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAR 354
GK V+ + I + S GIVYC SRK+CE++A L +RGI A YYH++ ++
Sbjct: 744 --GKQVVSVVEDLILHRFSPSWCGIVYCLSRKDCEEMAAALVRRGIKASYYHSEA--ASK 799
Query: 355 EKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSE 414
+ RW++++LQVI T+AFGMGINKPDVR+V+H ++ KS+E YYQESGRAGRDGLPSE
Sbjct: 800 NERQERWTRDELQVICATIAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSE 859
Query: 415 CLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNL-F 473
C+L D RQ ++ +L + R Y L+ + R + +QV++ F
Sbjct: 860 CVLLSTTTDRQRQERLIHGSKDWRASLTSLHRMLAYTLNDVDCRRRQQLHHFGEQVDVHF 919
Query: 474 CMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQLII 533
C+ A + L + + QL D KL E +K + ++L L
Sbjct: 920 CLTQRAAAGGGAVPALPPTSVASAS-AVTQLCDNCASKLAE-GWTVKEVNVSNILLDLYA 977
Query: 534 DRVLVRIGPFSPGKKIIKLEISSV 557
+++R+G + K++I + SV
Sbjct: 978 --IVLRLGAMT-SKQLIGVYRGSV 998
>gi|407917347|gb|EKG10661.1| Helicase [Macrophomina phaseolina MS6]
Length = 1739
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 178/354 (50%), Positives = 234/354 (66%), Gaps = 9/354 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
F W + F + +R +Q E INA L+G+D V+M GGGKSLCYQLPAV++
Sbjct: 848 FPWTGEVKKTLKDQFHLRGFRPHQLETINATLAGKDCFVLMPTGGGKSLCYQLPAVVQSG 907
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
G+ +V+SPLLSL++DQV L AL I A + S E +FI AL + + E +++
Sbjct: 908 KTRGVTVVISPLLSLMEDQVNHLRALHIQAFYINGELSYEQRRFIMNALREPQVEKFIQV 967
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE +SK++ ++ L+ HH RL+ I IDEAHC SQWGHDFRPDYK LG + QF
Sbjct: 968 LYVTPEMLSKNQAMVNLLQDLHHRQRLARIVIDEAHCVSQWGHDFRPDYKALGETRRQFI 1027
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+MALTATATQ V+ D + L I+ C F + NRPNL+Y VR K + + +IA
Sbjct: 1028 GVPVMALTATATQNVKVDTIHNLGIQGCEIFAQSFNRPNLYYEVRTKGKR-EDTLQKIAD 1086
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNK 365
I+ Y +SGIVYC SRK+CE +AQ+LR++ ISA +YHA M+ + + W
Sbjct: 1087 IIKTQY-RGQSGIVYCLSRKKCEVIAQQLREKHNISAHHYHAGMESAEKSETQKSWQAGG 1145
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+VIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG S C LF+
Sbjct: 1146 YKVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLFY 1199
>gi|432093931|gb|ELK25783.1| Bloom syndrome protein [Myotis davidii]
Length = 1296
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 206/501 (41%), Positives = 282/501 (56%), Gaps = 58/501 (11%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 544 FGLHHFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 603
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 604 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 663
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 664 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 723
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 724 TQLKILRPQVFTMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHPH-DSGIIYCLSRR 780
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G+ A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 781 ECDTMADTLQKNGLPALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 840
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 841 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYYDVTRLKRLILMEKDGNHHTRETH 900
Query: 438 LQNLYDIVRYSQYPLHWNIEKVR----LVIFEKLQQVNLFC------------------M 475
NLY +V Y + NI + R L F ++ FC
Sbjct: 901 FNNLYSMVHYCE-----NITECRRIQLLAYFGEIGFNPDFCKKHPEVSCDNCCQSKDYKT 955
Query: 476 VVLAGHAQCIISLLQD------IQDNNQ-----RLTMLQLVD--------KMKIKLKEID 516
+ G + I+ +Q+ + + N R TM LVD K++ +
Sbjct: 956 RDVTGDVKNIVRFVQEHSSSQGMGNRNHGGPCGRFTMNMLVDIFLGSKSAKIQSGIFGKG 1015
Query: 517 SDLKREEIEQLVLQLIIDRVL 537
S R E+L +LI+D++L
Sbjct: 1016 STYSRHNAERLFKKLILDKIL 1036
>gi|402086461|gb|EJT81359.1| RecQ helicase MUSN [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1754
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/382 (48%), Positives = 242/382 (63%), Gaps = 18/382 (4%)
Query: 79 ADDVRLNV---FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL----RE 131
++DVR + F + +R NQ E INA LSG+D V+M GGGKSLCYQLPAV+
Sbjct: 831 SNDVRRALKDHFRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVIDTGNTR 890
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL---EKGEGELKMLY 188
G+ +VVSPLLSL+QDQ+ L L I A + K I AL + E +++LY
Sbjct: 891 GVTIVVSPLLSLMQDQIDHLKVLHILARQFSGDVDKAQRDMILDALRSSKNPENMVRLLY 950
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE I KS+ F++ L+K + +L+ I IDEAHC SQWGHDFRPDYK LG ++ ++P V
Sbjct: 951 VTPEMIGKSQAFLNALDKVYSNDKLARIVIDEAHCVSQWGHDFRPDYKTLGEVRRRYPKV 1010
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATAT V D+ L I +C F + NRPNLFY +R K GK ++ IA I
Sbjct: 1011 PVMALTATATPHVIVDIKLNLSIPQCEIFSQSFNRPNLFYDIRTK---GKNIVQTIADLI 1067
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELR-QRGISADYYHADMDINAREKVHMRWSKNKLQ 367
Q + E+GIVY SRK E +A++LR Q GISA +YHA M+ + V +W +++
Sbjct: 1068 QSDH-EGETGIVYTLSRKSAETIAKKLRDQSGISAHHYHAKMETEEKTDVQRKWQSGQIK 1126
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
V+V T+AFGMGI+KPDVRFV+HH+L KS+E YYQE+GRAGRDG S C L+F D+
Sbjct: 1127 VVVATIAFGMGIDKPDVRFVVHHTLPKSLEGYYQETGRAGRDGGQSHCYLYFGYGDITSL 1186
Query: 428 SSMVFYENSGLQNLYDIVRYSQ 449
M+ N G N R SQ
Sbjct: 1187 RKMI---NDGEGNQEQRDRQSQ 1205
>gi|395502424|ref|XP_003755581.1| PREDICTED: Bloom syndrome protein [Sarcophilus harrisii]
Length = 1445
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/372 (48%), Positives = 238/372 (63%), Gaps = 12/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INAVL G D V+M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 697 FGLHHFRTNQLEAINAVLLGEDCFVLMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIID 756
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 757 QVQKLTSLDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 816
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK L +L+ +FP V MMALTATA +VQ D++
Sbjct: 817 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRLNMLRHKFPSVSMMALTATANPRVQKDIL 876
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 877 TQLKILNPQVFSMSFNRHNLKYSVLPKKP-KKVAFDCL-EWIRKHHPH-DSGIIYCLSRR 933
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 934 ECDTMADTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 993
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 994 YVIHSSLPKSVEGYYQESGRAGRDGEMSHCLLFYNYHDVTRLKRLILMEKDGNSHTRQTH 1053
Query: 438 LQNLYDIVRYSQ 449
NLY +V Y +
Sbjct: 1054 FNNLYSMVHYCE 1065
>gi|189054874|dbj|BAG36927.1| unnamed protein product [Homo sapiens]
Length = 1417
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 242/385 (62%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 722
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 723 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 782
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 783 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 842
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 843 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 899
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W ++ QVI T+AFGMGI+KPDVR
Sbjct: 900 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQGGCQVICATIAFGMGIDKPDVR 959
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 960 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1019
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1020 FNNLYSMVHYCE-----NITECRRI 1039
>gi|410960520|ref|XP_003986837.1| PREDICTED: Bloom syndrome protein [Felis catus]
Length = 1428
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 244/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 674 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 733
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 734 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 793
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 794 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 853
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 854 TQLKILQPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHPH-DSGIIYCLSRR 910
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 911 ECDTMADTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 970
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 971 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILMEKDGNRHTRETH 1030
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1031 FNNLYSMVHYCE-----NITECRRI 1050
>gi|169618104|ref|XP_001802466.1| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
gi|160703551|gb|EAT80652.2| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
Length = 1681
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/385 (46%), Positives = 252/385 (65%), Gaps = 16/385 (4%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
F W + ++ FG+ +R Q + INA L G V+M GGGKSLCYQLPAV+
Sbjct: 755 FPWSQDLRNTLIHRFGLRGFRPGQLDAINATLGGEHCFVLMPTGGGKSLCYQLPAVITSG 814
Query: 131 --EGIALVVSPLLSLIQDQVM-CLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LK 185
+G+ +VVSPLLSL++DQV + + A ++ +++ + I + L + + + ++
Sbjct: 815 KTQGVTIVVSPLLSLMEDQVTSAMERFNVQAFLINGESTQAQKTHIMEGLRERDPQKFMQ 874
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPE +SK++R +S ++ H RL+ I IDEAHC SQWGHDFRPDYK LG + QF
Sbjct: 875 LLYVTPEMLSKNQRMISAFQQLHSRRRLARIVIDEAHCVSQWGHDFRPDYKALGDVVRQF 934
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP++ALTATATQ V+ D++ L I+ C +F + NRPNL Y V KS K +I++IA
Sbjct: 935 PGVPVIALTATATQLVRTDVVANLGIQGCRQFSQSFNRPNLSYEVLPKS---KNIINDIA 991
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNK 365
K I+E + + +SGI+YC SRK CEQVA++L GISA +YHA M+ R V +W N+
Sbjct: 992 KLIKEKH-DKKSGIIYCLSRKSCEQVAEKLSNLGISAFHYHAGMEPAERSAVQRKWQHNE 1050
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
VIV T+AFGMGI+K DVR+V+HH+L KS+E YYQE+GRAGRDG S+C L+++ D
Sbjct: 1051 YHVIVATIAFGMGIDKADVRYVVHHTLPKSLEGYYQETGRAGRDGKRSDCYLYYQYGDC- 1109
Query: 426 RQSSMVFYENSGL----QNLYDIVR 446
R + + G Q L+D++R
Sbjct: 1110 RSLRKMIDDGEGSWEQKQRLHDMLR 1134
>gi|348580071|ref|XP_003475802.1| PREDICTED: Bloom syndrome protein-like [Cavia porcellus]
Length = 1405
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/502 (41%), Positives = 280/502 (55%), Gaps = 59/502 (11%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 650 FGLHNFRTNQLEAINATLLGEDCFILMPTGGGKSLCYQLPACVLPGVTIVISPLRSLIVD 709
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 710 QVQKLTSLDIPATYLTGDKTDSEAASIYLQLSKKDPIIKLLYVTPEKVCASNRLISILEN 769
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFRPDYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 770 LYERKLLARFVIDEAHCVSQWGHDFRPDYKRMNMLRQKFPSVPVMALTATANSRVQTDIL 829
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR
Sbjct: 830 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRW 886
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 887 ECDTMADTLQKDGLAALAYHAGLSDAARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 946
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 947 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNRHTKETH 1006
Query: 438 LQNLYDIVRYSQYPLHWNIEKVR----LVIFEKLQQVNLFC------------------M 475
NLY +V Y + NI + R L F + FC
Sbjct: 1007 FNNLYSMVHYCE-----NITECRRIQLLAYFGENGFNPEFCRKHPDVSCDNCCKTKDYKT 1061
Query: 476 VVLAGHAQCIISLLQD------------IQDNNQRLTMLQLVD--------KMKIKLKEI 515
+ G + II +Q+ + ++ R TM LVD K++ +
Sbjct: 1062 RDVTGDVKNIIKFIQEHSSLQGARSAKYVGPSSGRFTMNMLVDIFLGSKSAKVQSGIFGK 1121
Query: 516 DSDLKREEIEQLVLQLIIDRVL 537
S R E+L +LI+D++L
Sbjct: 1122 GSTYSRHNAERLFKKLILDKIL 1143
>gi|398016123|ref|XP_003861250.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Leishmania
donovani]
gi|322499475|emb|CBZ34548.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Leishmania
donovani]
Length = 1946
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/424 (44%), Positives = 254/424 (59%), Gaps = 19/424 (4%)
Query: 57 QYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAG 116
QYGG F W + + VFG+ YR Q EI+NA + GRDV V++ G
Sbjct: 499 QYGGER----------FPWSAELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTG 548
Query: 117 GGKSLCYQLPAVLREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY 174
GGKSLCYQLPA++ + +VVSPL+SLIQDQV L A IPA LT T+ + ++
Sbjct: 549 GGKSLCYQLPALMPNPAQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLF 608
Query: 175 KALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPD 234
+ G ++YVTPE +S F+ L+ G L IDEAHC SQWGHDFRPD
Sbjct: 609 QEWASGHVVHTLVYVTPEYFGRSDHFVGTLQGLADKGLLCRFVIDEAHCVSQWGHDFRPD 668
Query: 235 YKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKS 294
Y+ L +LK QFP P+ ALTATAT VQ D+++ L +R I F + NR NL Y V+
Sbjct: 669 YRKLSVLKRQFPRTPITALTATATDLVQQDVIKTLALRDAIIFKGSFNRANLKYSVQHVR 728
Query: 295 SVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAR 354
GK VI + + + S GIVYC SRK+CE++A L +RGI A YYH++ ++
Sbjct: 729 --GKQVIPVVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHSEA--ASK 784
Query: 355 EKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSE 414
+ RW++++LQVI T+AFGMGINKPDVR+V+H ++ KS+E YYQESGRAGRDGLPSE
Sbjct: 785 NERQERWTRDELQVICATIAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSE 844
Query: 415 CLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIE-KVRLVIFEKLQQVNL- 472
C+L D RQ ++ +L + R Y L+ N++ + R + +QV++
Sbjct: 845 CVLLSTTTDRQRQERLIHGSKDWRASLTSLHRMLAYTLN-NVDCRRRQQLHHFGEQVDVH 903
Query: 473 FCMV 476
FC+
Sbjct: 904 FCLT 907
>gi|301768849|ref|XP_002919837.1| PREDICTED: Bloom syndrome protein-like [Ailuropoda melanoleuca]
gi|281350343|gb|EFB25927.1| hypothetical protein PANDA_008500 [Ailuropoda melanoleuca]
Length = 1423
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 245/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 670 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 729
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 730 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 789
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 790 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 849
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P+ +SGI+YC SR+
Sbjct: 850 TQLKILQPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHPH-DSGIIYCLSRR 906
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 907 ECDTMADTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 966
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 967 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILMEKEGNHHTRETH 1026
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
+ NLY +V Y + NI + R +
Sbjct: 1027 INNLYSMVHYCE-----NITECRRI 1046
>gi|146088064|ref|XP_001465982.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
infantum JPCM5]
gi|134070083|emb|CAM68416.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
infantum JPCM5]
Length = 1946
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/425 (44%), Positives = 255/425 (60%), Gaps = 21/425 (4%)
Query: 57 QYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAG 116
QYGG F W + + VFG+ YR Q EI+NA + GRDV V++ G
Sbjct: 499 QYGGER----------FPWSAELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTG 548
Query: 117 GGKSLCYQLPAVLREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY 174
GGKSLCYQLPA++ + +VVSPL+SLIQDQV L A IPA LT T+ + ++
Sbjct: 549 GGKSLCYQLPALMPNPAQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLF 608
Query: 175 KALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPD 234
+ G ++YVTPE +S F+ L+ G L IDEAHC SQWGHDFRPD
Sbjct: 609 QEWASGHVVHTLVYVTPEYFGRSDHFVGTLQGLADKGLLCRFVIDEAHCVSQWGHDFRPD 668
Query: 235 YKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKS 294
Y+ L +LK QFP P+ ALTATAT VQ D+++ L +R I F + NR NL Y V+
Sbjct: 669 YRKLSVLKRQFPRTPITALTATATDLVQQDVIKTLALRDAIIFKGSFNRANLKYSVQHVR 728
Query: 295 SVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHAD-MDINA 353
GK VI + + + S GIVYC SRK+CE++A L +RGI A YYH++ N
Sbjct: 729 --GKQVIPVVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHSEAASKNE 786
Query: 354 REKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPS 413
R++ RW++++LQVI T+AFGMGINKPDVR+V+H ++ KS+E YYQESGRAGRDGLPS
Sbjct: 787 RQE---RWTRDELQVICATIAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPS 843
Query: 414 ECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIE-KVRLVIFEKLQQVNL 472
EC+L D RQ ++ +L + R Y L+ N++ + R + +QV++
Sbjct: 844 ECVLLSTTTDRQRQERLIHGSKDWRASLTSLHRMLAYTLN-NVDCRRRQQLHHFGEQVDV 902
Query: 473 -FCMV 476
FC+
Sbjct: 903 HFCLT 907
>gi|449015395|dbj|BAM78797.1| ATP-dependent DNA helicase RecQ [Cyanidioschyzon merolae strain 10D]
Length = 1603
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/375 (48%), Positives = 240/375 (64%), Gaps = 12/375 (3%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WS ++R FG +RANQ+E INA + GRDV V+M GGGKSL YQL A
Sbjct: 766 WSAQLHHNNRVQ------FGNQGFRANQKEAINAAMCGRDVFVLMPTGGGKSLVYQLAAT 819
Query: 129 LRE----GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
L G+ +VVSPL SLI DQVM L AL IP L TS+ + + + + L +
Sbjct: 820 LTGPAGCGVTVVVSPLKSLIMDQVMRLQALRIPCGALCGATSETESRELMRDLRSLHPKT 879
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++LYVTPEKIS S+ F S L+ L+ IDEAHC SQWGHDFRPDYK L + K +
Sbjct: 880 RILYVTPEKISLSEAFRSILDWLASRKLLARFVIDEAHCVSQWGHDFRPDYKRLSLCKQR 939
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+P VP+MALTATAT++V+ D+ L I +C+ F + NRPN+ Y V K K V + I
Sbjct: 940 YPSVPLMALTATATREVREDVKVQLGIPRCVTFKQSFNRPNISYEVYLKGPRSKTV-EWI 998
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSK 363
A++IQ P SGI+YCFS++ECE VA+ L RQ I+A++YHA + +R V RW +
Sbjct: 999 AEFIQNEMPRGASGIIYCFSKQECEDVAKALRRQFRIAAEHYHAGLTDESRIAVQQRWMR 1058
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
QVIV T+AFGMGI+KPDVRFVIH+++ K+VE +YQESGRAGRDG P+ ++ F AD
Sbjct: 1059 RATQVIVATIAFGMGIDKPDVRFVIHYTMPKNVEGFYQESGRAGRDGQPARSIVLFSHAD 1118
Query: 424 VPRQSSMVFYENSGL 438
R M+ ++GL
Sbjct: 1119 QRRLIGMIDKNSNGL 1133
>gi|397472473|ref|XP_003807768.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan paniscus]
gi|397472475|ref|XP_003807769.1| PREDICTED: Bloom syndrome protein isoform 2 [Pan paniscus]
Length = 1417
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 722
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 723 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 782
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 783 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 842
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 843 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 899
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 900 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 959
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 960 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1019
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1020 FNNLYSMVHYCE-----NITECRRI 1039
>gi|410346341|gb|JAA40688.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 722
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 723 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 782
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 783 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 842
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 843 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 899
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 900 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 959
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 960 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1019
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1020 FNNLYSMVHYCE-----NITECRRI 1039
>gi|402875293|ref|XP_003901445.1| PREDICTED: Bloom syndrome protein-like [Papio anubis]
Length = 1042
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 288 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 347
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 348 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 407
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 408 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 467
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ YP +SGI+YC SR+
Sbjct: 468 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHYP-YDSGIIYCLSRR 524
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 525 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 584
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 585 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH 644
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 645 FNNLYSMVHYCE-----NITECRRI 664
>gi|148236484|ref|NP_001079095.1| Bloom syndrome protein homolog [Xenopus laevis]
gi|17366056|sp|Q9DEY9.1|BLM_XENLA RecName: Full=Bloom syndrome protein homolog; Short=xBLM; AltName:
Full=RecQ helicase homolog
gi|11120568|gb|AAG30928.1|AF307841_1 Bloom's syndrome-like protein [Xenopus laevis]
Length = 1364
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/500 (40%), Positives = 276/500 (55%), Gaps = 57/500 (11%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLP + G+ +V+SPL SLI D
Sbjct: 615 FGLHRFRTNQLEAINACLCGEDCFILMPTGGGKSLCYQLPGCISPGVTIVISPLRSLIVD 674
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S +E
Sbjct: 675 QVQKLTSLDIPATYLTGDKTDAEAASIYLQLSKKDPIIKLLYVTPEKVCASTRLISTMEN 734
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFRPDYK L +L+ +F VPMMALTATA +V+ D++
Sbjct: 735 LYERQLLARFVIDEAHCVSQWGHDFRPDYKRLNVLRQKFQSVPMMALTATANPRVKKDIL 794
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + K F + NR NL Y V K K V + ++I++ +PN +SGI+YC SR
Sbjct: 795 NQLKMTKPQIFTMSFNRDNLKYEVLPKKP--KRVALDCVEWIKKHHPN-DSGIIYCLSRH 851
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + + R+ V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 852 ECDTMADTLQKEGLAALAYHAGLADSNRDYVQHKWINQDDCQVICATIAFGMGIDKPDVR 911
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 912 YVIHASLPKSVEGYYQESGRAGRDGETSHCLLFYSYHDVTRIRRLIQMEKDGNSHTKQTH 971
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQ--C----------- 484
NLY +V Y + N+ + R + N F H Q C
Sbjct: 972 FNNLYSMVHYCE-----NVVECRRMQLLSYFGENNFNPNFCKEHTQVACDNCLGKKNYKS 1026
Query: 485 ---------IISLLQDI----------QDNNQRLTMLQLVD--------KMKIKLKEIDS 517
I+ +QD + NN RLT+ +VD K++ L +
Sbjct: 1027 RDVTDDVGNIVRFVQDNCSLVQGRGKGRSNNTRLTLNMMVDIFLGSKSAKIQTGLFGKGA 1086
Query: 518 DLKREEIEQLVLQLIIDRVL 537
R E+L +L++DR++
Sbjct: 1087 AYSRHNAERLFRKLVLDRII 1106
>gi|114658901|ref|XP_510594.2| PREDICTED: Bloom syndrome protein isoform 2 [Pan troglodytes]
gi|332844655|ref|XP_003314898.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan troglodytes]
Length = 1417
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 722
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 723 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 782
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 783 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 842
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 843 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 899
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 900 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 959
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 960 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1019
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1020 FNNLYSMVHYCE-----NITECRRI 1039
>gi|219124697|ref|XP_002182634.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405980|gb|EEC45921.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 440
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/389 (46%), Positives = 249/389 (64%), Gaps = 17/389 (4%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F+W S F I ++R +Q+EI+NA +SG DV VIM GGGKSL YQLPA+L EG
Sbjct: 1 FQWSSSMMYHLQYSFRIRSFRDHQKEIVNATMSGDDVFVIMRTGGGKSLTYQLPALL-EG 59
Query: 133 ------IALVVSPLLSLIQDQ-----VMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
+ V+SPLLSLIQDQ C + + LT ++ + + +
Sbjct: 60 RGPSAQVTFVISPLLSLIQDQEEQMNAFCPNSATSFSSGLTGGNAEHARR--WSMVRDPT 117
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
+ +++VTPEK+ KS + S+L+K H GRL +DEAHC SQ+GHDFRPDY LGIL
Sbjct: 118 AGMCLVFVTPEKVHKSGKLKSELQKLHDQGRLGRFVVDEAHCVSQYGHDFRPDYAQLGIL 177
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFV-STINRPNLFYMVREKSSVGKVV 300
K QFP +PM+A+TATA+ +V+ D+ ++L + +F ST NRPNL Y VR K +
Sbjct: 178 KRQFPSIPMIAVTATASDRVREDVCQILRLGTRYRFFRSTANRPNLQYSVRPKPDSKDGI 237
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
+ +A +IQE + ++GIVY FS+K+ + VA L Q GI A YH+D+ +E +H
Sbjct: 238 LANMAAFIQEHHAK-DAGIVYTFSKKDADTVADALCQYGIVARSYHSDVSPTNKEYIHRS 296
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W +N+ QV+V T+AFG+GINKPDVRFV+HH++SK++E YYQESGRAGRDG + C+L++
Sbjct: 297 WMRNETQVVVATIAFGLGINKPDVRFVLHHTISKTLEAYYQESGRAGRDGRDANCVLYYS 356
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQ 449
P DVPR MV N G Q L+ +VRY Q
Sbjct: 357 PKDVPRMMKMVHGSN-GEQLLWTMVRYGQ 384
>gi|410261436|gb|JAA18684.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 722
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 723 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 782
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 783 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 842
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 843 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 899
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 900 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 959
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 960 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1019
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1020 FNNLYSMVHYCE-----NITECRRI 1039
>gi|226292234|gb|EEH47654.1| ATP-dependent DNA helicase Q1 [Paracoccidioides brasiliensis Pb18]
Length = 1550
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/354 (48%), Positives = 230/354 (64%), Gaps = 9/354 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W L+ FG+ +R NQ E INA L G+D V+M GGGKSLCYQLPAV+
Sbjct: 678 YPWSKDVKSALLHRFGLSGFRLNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVNSG 737
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
+G+ +V+SPLLSL++DQV L L I A +L +KE + IY AL E +++
Sbjct: 738 TTKGVTVVISPLLSLMEDQVAHLKELHIQAFLLNGDVNKEHKSLIYSALANPNVEKLIQL 797
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE ++K+ + L + H +L+ I IDEAHC SQWGHDFRPDYK LG + +FP
Sbjct: 798 LYVTPEMVNKNGALLGALSRLHSRKKLARIVIDEAHCVSQWGHDFRPDYKELGNTRAKFP 857
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
+P+MALTATAT+ V+ D++ L +R FV + NRPNL Y VR K VI+ IA+
Sbjct: 858 GIPLMALTATATENVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPK-NTNVIESIAE 916
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNK 365
I ESY + ++GI+YC SR+ CE+VA +LR + I A +YHA + R + W K
Sbjct: 917 TINESY-SGQAGIIYCLSRRSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSGK 975
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+K DVRFVIHH++ KS+E YYQE+GRAGRDG S C L++
Sbjct: 976 YNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLYY 1029
>gi|296418818|ref|XP_002839022.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635016|emb|CAZ83213.1| unnamed protein product [Tuber melanosporum]
Length = 527
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/364 (46%), Positives = 237/364 (65%), Gaps = 9/364 (2%)
Query: 74 EWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR--- 130
+W D F + +R NQ E INA L+G DV V+M GGGKSL YQLPA++R
Sbjct: 9 KWSRDVADALRRRFNLKGFRNNQLEAINATLAGDDVFVLMPTGGGKSLIYQLPAIIRSGK 68
Query: 131 -EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--EKGEGELKML 187
G+ +VVSPLLSL+QDQV L L I A + +++ + +Y +L E E +++L
Sbjct: 69 THGVTIVVSPLLSLMQDQVDHLQKLNIMAFFINGEINEDQRRLLYDSLYHEDVEEMVQLL 128
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
Y+TPE I+KS + ++ L H G+L+ I +DEAHC SQWGHDFRPDYK LG LK+++P
Sbjct: 129 YITPEMIAKSDKMVNTLLSLHRRGKLARIVVDEAHCVSQWGHDFRPDYKTLGNLKSKYPG 188
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP +ALTATAT+KV+ D+ L + + F + NRPNL Y V K+ K V+D+I +
Sbjct: 189 VPWIALTATATEKVRMDVQLNLDMPRAKTFTQSFNRPNLNYQVSPKT---KNVLDDIVEI 245
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
+ +++GI+YC SR+ CEQ A++LR RGI A ++HA + + + ++ W +
Sbjct: 246 CRRPEYLNKTGIIYCLSRQNCEQTAEKLRTRGIRAQHFHAKLQADEKIRLQKEWQARRFN 305
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VIV T+AFGMGI+KPDVRFVIHH++ KS+E YYQE+GRAGRDGLPS C LF+ D
Sbjct: 306 VIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGLPSGCFLFYAYPDTSTL 365
Query: 428 SSMV 431
M+
Sbjct: 366 YRMI 369
>gi|427713763|ref|YP_007062387.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427377892|gb|AFY61844.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 730
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/340 (50%), Positives = 233/340 (68%), Gaps = 7/340 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG A+R Q +II A L+ +DVL I+ GGGKS+C+QLPA+L+ GI LVVSPL++L+
Sbjct: 9 HYFGYEAFRPGQADIITASLNQQDVLAILPTGGGKSICFQLPALLKTGITLVVSPLIALM 68
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
DQV+ L GI A L ST S + + A+ GE +K+LYV PE++ S F + L
Sbjct: 69 LDQVVALQKNGIAATFLNSTLSAAEARGRIAAIMAGE--VKLLYVAPERLV-SDSFTALL 125
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E H +S I +DEAHC S+WGHDFRPDY+ L L+ +FP +P++ALTATAT +V+ D
Sbjct: 126 ETIHQTVGISSIVVDEAHCVSEWGHDFRPDYRQLSRLRERFPTIPVIALTATATHRVRTD 185
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ E L ++K V++ NRPNL+Y V EKS GKV + E+ YI+E+ SGI+YC S
Sbjct: 186 ITEQLSLKKPFVHVASFNRPNLYYEVIEKSR-GKVSLSELTGYIKET---EGSGIIYCMS 241
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E++A EL + GISA YHA + R R+ ++ +Q++V TVAFGMGINKPDV
Sbjct: 242 RKQVEKLASELNENGISALPYHAGLSNETRTDHQTRFIRDDVQIMVATVAFGMGINKPDV 301
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFVIH+ L +++E YYQESGRAGRDG P+ C LFF P D+
Sbjct: 302 RFVIHYDLPQTIEGYYQESGRAGRDGEPARCTLFFSPGDI 341
>gi|429961617|gb|ELA41162.1| RecQ family ATP-dependent DNA helicase [Vittaforma corneae ATCC
50505]
Length = 733
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/340 (49%), Positives = 230/340 (67%), Gaps = 6/340 (1%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
NVF + +R NQ+EII A L+ D+ V+M GGGKSLCYQLPA++++G+ +V+SPLLSLI
Sbjct: 165 NVFNLENFRGNQEEIIKAALNKEDIFVLMPTGGGKSLCYQLPAMIQDGLTVVISPLLSLI 224
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
DQV L IPA L S + + I K L+ +K++YVTPE ++KS +F + L
Sbjct: 225 HDQVSNLLNKNIPAVALNSNCTYSERTLIMKTLQACHS-VKIVYVTPELLNKSTQFSNIL 283
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ GRL IDEAHC SQWGHDFRPDYK LGI+K +FP +P++ALTATAT+KV+ D
Sbjct: 284 HELDRRGRLCRFVIDEAHCVSQWGHDFRPDYKELGIIKRKFPRIPLIALTATATKKVELD 343
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L I C F + NRPNL Y V K+ K + +I ++ YPNS GI+YC S
Sbjct: 344 VLNSLGIEGCKVFRQSFNRPNLKYYVMSKT---KKSLTDIVSFVHTYYPNS-PGIIYCTS 399
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
+K+CE+++++L + + +YHA + R KV W+ +++IV T+AFGMGI+K DV
Sbjct: 400 KKDCEEMSEKLNEH-LKTTFYHAGLSKRERNKVQEMWNDGTIKIIVATIAFGMGIDKSDV 458
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFVIH+SL KS+E YYQE+GRAGRDGL S C+L++ D
Sbjct: 459 RFVIHYSLPKSLEGYYQETGRAGRDGLESVCILYYNYGDT 498
>gi|219518767|gb|AAI43281.1| BLM protein [Homo sapiens]
Length = 1042
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 288 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 347
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 348 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 407
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 408 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 467
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 468 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 524
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 525 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 584
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 585 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 644
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 645 FNNLYSMVHYCE-----NITECRRI 664
>gi|380797039|gb|AFE70395.1| Bloom syndrome protein, partial [Macaca mulatta]
Length = 786
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 32 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 91
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 92 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 151
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 152 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 211
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ YP +SGI+YC SR+
Sbjct: 212 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHYP-YDSGIIYCLSRR 268
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 269 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 328
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 329 FVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH 388
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 389 FNNLYSMVHYCE-----NITECRRI 408
>gi|237838631|ref|XP_002368613.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211966277|gb|EEB01473.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
Length = 1753
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 174/372 (46%), Positives = 243/372 (65%), Gaps = 6/372 (1%)
Query: 63 STAVENWSG--TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+T NW FEWD VFG A+R Q+ IINAVLS RDV V+M GGGKS
Sbjct: 709 NTVSRNWEAERGFEWDEAVRACNEKVFGNRAFRPMQRAIINAVLSQRDVFVMMPTGGGKS 768
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LC+QLPA++ G+ +VV PL+SLI DQ+ + L + + E++K +Y L +G
Sbjct: 769 LCFQLPAIVSGGVTVVVMPLVSLITDQLEQMQLLNVGCRAFAANQPWEEQKAVYDELRRG 828
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
GE+ +L VTPEK+ S S L + + G L +IDEAHC SQWG+DFRPDY+ L
Sbjct: 829 TGEIHLLLVTPEKLKGSSLLRSCLHELNREGCLDRFAIDEAHCVSQWGNDFRPDYRQLQS 888
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
L+ ++P+VP++ALTATAT+ V D++ L +R+ + F + +RPNL Y VR K V + +
Sbjct: 889 LREEYPNVPLVALTATATKAVLQDVVTQLRMREPVVFQGSFDRPNLRYEVRPK--VPRRI 946
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHM 359
+++IA I+ + + SGIVYC SR+ECE+VA+ L R GISA +YHA +D RE++
Sbjct: 947 VEDIAATIKTEF-HGLSGIVYCLSRRECERVAEGLQRHAGISAGFYHAQLDAEKREEIQR 1005
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
W + ++VIV T+AFGMGINK DVRFVIH ++ K +E +YQESGRAGR+G + C+LF+
Sbjct: 1006 DWMNDDIKVIVATLAFGMGINKRDVRFVIHCAMPKCLENFYQESGRAGRNGEEASCILFY 1065
Query: 420 RPADVPRQSSMV 431
D RQS ++
Sbjct: 1066 NYHDKQRQSHLI 1077
>gi|395861752|ref|XP_003803142.1| PREDICTED: Bloom syndrome protein [Otolemur garnettii]
Length = 1389
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 242/385 (62%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 653 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 712
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 713 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 772
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 773 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 832
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 833 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKYHP-YDSGIIYCLSRR 889
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A LR+ G++A YHA + + R++V +W +++ QVI TVAFGMGI+KPDVR
Sbjct: 890 ECDTMAGTLRKDGLAALAYHAGLSDSERDEVQHKWINQDGCQVICATVAFGMGIDKPDVR 949
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 950 FVIHASLPKSVEGYYQESGRAGRDGEMSHCLLFYTYHDVTRLKRLIMMEKDGNHHTKETH 1009
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1010 FNNLYSMVHYCE-----NITECRRI 1029
>gi|221505512|gb|EEE31157.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 1753
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 174/372 (46%), Positives = 243/372 (65%), Gaps = 6/372 (1%)
Query: 63 STAVENWSG--TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+T NW FEWD VFG A+R Q+ IINAVLS RDV V+M GGGKS
Sbjct: 709 NTVSRNWEAERGFEWDEAVRACNEKVFGNRAFRPMQRAIINAVLSQRDVFVMMPTGGGKS 768
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LC+QLPA++ G+ +VV PL+SLI DQ+ + L + + E++K +Y L +G
Sbjct: 769 LCFQLPAIVSGGVTVVVMPLVSLITDQLEQMQLLNVGCRAFAANQPWEEQKAVYDELRRG 828
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
GE+ +L VTPEK+ S S L + + G L +IDEAHC SQWG+DFRPDY+ L
Sbjct: 829 TGEIHLLLVTPEKLKGSSLLRSCLHELNREGCLDRFAIDEAHCVSQWGNDFRPDYRQLQS 888
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
L+ ++P+VP++ALTATAT+ V D++ L +R+ + F + +RPNL Y VR K V + +
Sbjct: 889 LREEYPNVPLVALTATATKAVLQDVVTQLRMREPVVFQGSFDRPNLRYEVRPK--VPRRI 946
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHM 359
+++IA I+ + + SGIVYC SR+ECE+VA+ L R GISA +YHA +D RE++
Sbjct: 947 VEDIAATIKTEF-HGLSGIVYCLSRRECERVAEGLQRHAGISAGFYHAQLDAEKREEIQR 1005
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
W + ++VIV T+AFGMGINK DVRFVIH ++ K +E +YQESGRAGR+G + C+LF+
Sbjct: 1006 DWMNDDIKVIVATLAFGMGINKRDVRFVIHCAMPKCLENFYQESGRAGRNGEEASCILFY 1065
Query: 420 RPADVPRQSSMV 431
D RQS ++
Sbjct: 1066 NYHDKQRQSHLI 1077
>gi|378733670|gb|EHY60129.1| bloom syndrome protein [Exophiala dermatitidis NIH/UT8656]
Length = 1681
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/411 (44%), Positives = 257/411 (62%), Gaps = 12/411 (2%)
Query: 18 RLVQEQIKQLVDRQDQLYERQSELKSLLEAFEA-SRGSPIQYGGSSSTAVENWSGTFEWD 76
++V+E + L + R+S+ L E + R SP + + ++A + W
Sbjct: 756 KMVEEFEQNLSTHKSTATSRRSDRVPLSEVSDNLRRASPKKAPATLASATNSSLMQHPWS 815
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EG 132
V F + +R NQ E INA LSG+D V+M GGGKSLCYQLPAV++ G
Sbjct: 816 KDVALVLKKKFHLRGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVQSGHTRG 875
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE---LKMLYV 189
+ +V+SPLLSL+QDQV L AL I A ++ T+ K I L +G+ +++LYV
Sbjct: 876 VTIVISPLLSLMQDQVEHLKALNIQAQLINGETTVAHRKTILDHL-RGDSPHDFVQLLYV 934
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
TPE +++++ F+ E H L+ I IDEAHC SQWGHDFRPDYK LG +++F VP
Sbjct: 935 TPEMVNQNQTFVRAFEGLHSRCLLARIVIDEAHCVSQWGHDFRPDYKALGEFRSRFNAVP 994
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATAT+ V+ D+M++L + C F + NRPNL Y VR K G+ V+D IA I+
Sbjct: 995 VMALTATATENVKFDVMQVLGMENCEVFTQSFNRPNLTYEVRPKGK-GRAVLDSIADLIK 1053
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQV 368
+Y + ++GIVYC SRK CE VA +LR+ I A +YHA + R ++ +W + + V
Sbjct: 1054 STY-DGQAGIVYCLSRKNCESVATQLRKEYHIEAQHYHAGIPSGKRIEIQQKWQEGEFNV 1112
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
IV T+AFGMGI+KPDVRFVIHH++ KS+E YYQE+GRAGRDG S C L++
Sbjct: 1113 IVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGNQSGCYLYY 1163
>gi|258574619|ref|XP_002541491.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
gi|237901757|gb|EEP76158.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
Length = 1432
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 239/363 (65%), Gaps = 12/363 (3%)
Query: 64 TAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
TA+E + + D +A +VF + +R NQ E INA L+G+D V+M GGGKSLCY
Sbjct: 598 TAIEGMNHPWSADVKA--ALRDVFKLRGFRPNQLEAINATLNGKDAFVLMPTGGGKSLCY 655
Query: 124 QLPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
QLP+V++ G+ +V+SPLLSL+ DQV L +L I AH + + S D I L K
Sbjct: 656 QLPSVVQSGRTRGVTVVISPLLSLMDDQVEQLRSLSIKAHFINGSLSAADRCEILAYLHK 715
Query: 180 G--EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKN 237
E L++LYVTPE ++KS+ + L + H A + + + IDEAHC SQWGHDFRPDYK
Sbjct: 716 PRVEDYLQILYVTPEMVNKSRVMLGALRQLHRAKKFARLVIDEAHCVSQWGHDFRPDYKE 775
Query: 238 LGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVG 297
LG + +F VP+MALTATAT+ V+ D++ L ++ C F + NRPNL Y VR K +
Sbjct: 776 LGEFRREFRGVPLMALTATATKNVEVDVIHNLGMQGCETFTQSFNRPNLTYEVRTKVNYD 835
Query: 298 KVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELR-QRGISADYYHADMDINAREK 356
+ ++ I++ I Y ++GI+YC SRK CE++A +LR + I A +YHA MD + R
Sbjct: 836 E-TLESISRIIDFHY--GKTGIIYCLSRKNCERLATDLRVKHQIRATHYHAGMDADQRID 892
Query: 357 VHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECL 416
V +W + QVIV T+AFGMGI+KPDVRFVIHHS+ KS+E YYQE+GRAGRDG SEC
Sbjct: 893 VQRKWQSGEHQVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSECF 952
Query: 417 LFF 419
LF+
Sbjct: 953 LFY 955
>gi|347829887|emb|CCD45584.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1775
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 165/353 (46%), Positives = 236/353 (66%), Gaps = 9/353 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E INA L+GRD ++M GGGKSLCYQLPA+++
Sbjct: 893 WSNDVKKALKDRFRLKGFRHNQLEAINATLAGRDAFILMPTGGGKSLCYQLPAIVQSGKT 952
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
+G+ +VVSPLL+L+ DQV L L I A++ S +++E + ++ L K E +++LY
Sbjct: 953 KGVTIVVSPLLALMHDQVDHLHKLRIQAYLFNSESTQETRQQLFNGLNERKPEQFVELLY 1012
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE I+KS SKL+ + RL+ I IDEAHC SQWGHDFRPDYKNL L+ ++P V
Sbjct: 1013 VTPEMINKSNAIQSKLDDLYAKKRLARIVIDEAHCVSQWGHDFRPDYKNLHELRGRYPGV 1072
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV--VIDEIAK 306
P +ALTATAT++V+ D++ L ++ C + + NRPN++Y VR K+ G + EI K
Sbjct: 1073 PFIALTATATERVKKDVIHNLGMQNCEQLKQSFNRPNIYYEVRRKTGKGSTAAMFSEITK 1132
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
+ Y N +SGI+YC SR CE+VA++LR++GI A ++HA M ++ RW +
Sbjct: 1133 MLSVDYKN-QSGIIYCLSRDNCEEVAKKLREQGIRAHHFHAHMTPEEKKDTQHRWQIGSI 1191
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
QV+V T+AFGMGI+K +VRFVIH+ L K++E YYQE+GRAGRDG P+ C L++
Sbjct: 1192 QVVVATIAFGMGIDKQNVRFVIHYCLPKTLEGYYQETGRAGRDGKPAACFLYY 1244
>gi|157870239|ref|XP_001683670.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania major
strain Friedlin]
gi|68126736|emb|CAJ05096.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania major
strain Friedlin]
Length = 1691
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 202/506 (39%), Positives = 284/506 (56%), Gaps = 22/506 (4%)
Query: 57 QYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAG 116
QYGG F W + + VFG+ YR Q EI+NA + GRDV V++ G
Sbjct: 245 QYGGER----------FPWSAELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTG 294
Query: 117 GGKSLCYQLPAVLREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY 174
GGKSLCYQLPA++ + +VVSPL+SLIQDQV L A IPA LT T+ + ++
Sbjct: 295 GGKSLCYQLPALMPNPAQVTIVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLF 354
Query: 175 KALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPD 234
+ G ++YVTPE +S F+ L+ G L IDEAHC SQWGHDFRPD
Sbjct: 355 QEWASGHVVHTLVYVTPEYFGRSDHFVGTLQGLADKGLLCRFVIDEAHCVSQWGHDFRPD 414
Query: 235 YKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKS 294
Y+ L +LK QF P+ ALTATAT VQ D+++ L +R I F + NR NL Y V+
Sbjct: 415 YRKLSVLKRQFLRTPITALTATATDLVQQDVIKTLALRDAIIFKGSFNRANLKYSVQHVR 474
Query: 295 SVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAR 354
GK VI + + + S GIVYC SRK+CE++A L +RGI A YYH++ ++
Sbjct: 475 --GKQVIPVVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHSEA--ASK 530
Query: 355 EKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSE 414
+ RW++++LQVI T+AFGMGINKPDVR+V+H ++ KS+E YYQESGRAGRDGLPSE
Sbjct: 531 NERQERWTRDELQVICATIAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSE 590
Query: 415 CLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNL-F 473
C+L D RQ ++ +L + R Y L+ + R + +QV++ F
Sbjct: 591 CVLLSTTTDRQRQERLIHGSKDWRASLTSLHRMLAYTLNDVDCRRRQQLHHFGEQVDVHF 650
Query: 474 CMVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQLII 533
C+ A + L + + QL D KL E +K ++ ++L L
Sbjct: 651 CLTQRAAAGGGAMPPLPPTSAASVS-AVTQLCDNCASKLAE-GWTVKEVDVGNILLDLYA 708
Query: 534 DRVLVRIGPFSPGKKIIKLEISSVQK 559
+++R+G + K++I + SV +
Sbjct: 709 --IILRLGTMT-SKQLIGVYRGSVSE 731
>gi|403411346|emb|CCL98046.1| predicted protein [Fibroporia radiculosa]
Length = 862
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 186/487 (38%), Positives = 294/487 (60%), Gaps = 30/487 (6%)
Query: 4 EEILQELENVEAEVRLVQEQIKQLVD-RQDQLYERQSELKSLLEAFEASRGSPIQYGG-- 60
+++ + L +++AE++ V+E +K+L R+ L ER+ + L A + + SP+ G
Sbjct: 81 DKLNEHLASLDAEIQSVEEDLKKLATLREALLDERKEVIAKLQSAQKRATISPLDDMGLD 140
Query: 61 --SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
S+ + ++ +EW VFGI +R Q + NA + RD++ +M GGG
Sbjct: 141 ITRSAGSRIDYHTEYEWSDALRGKMKAVFGIDNFRLCQHGVCNANMDRRDIICVMPTGGG 200
Query: 119 KSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYK--- 175
KSL YQLPA+ G LV+SPL+SL+ DQ++ L G+ A M TS+TSKE+ + I
Sbjct: 201 KSLTYQLPALFVSGCTLVISPLISLMNDQILHLREAGVEAVMFTSSTSKEEAREIDNRLV 260
Query: 176 ALEKG----EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDF 231
A+ G + ++K+ YVTPEKI+K+K FM LEK + A +L IDEAHC S+ GHD+
Sbjct: 261 AMAHGRSGSDADIKLCYVTPEKIAKNKAFMPLLEKLYKARKLERFVIDEAHCVSEAGHDY 320
Query: 232 RPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRK------------CIKFVS 279
RPDY+ L +L+ FP VP++AL+AT KV DLM++L +++ + F +
Sbjct: 321 RPDYQKLNVLRKVFPKVPILALSATCPPKVMQDLMDVLQMKQPLHHGDRAGVDGTVYFTA 380
Query: 280 TINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG 339
+ R NL Y V K K +++ +A YI + + + SGI+YC S+K+ E V+++L +R
Sbjct: 381 PLYRKNLHYSVLPKPMSHKEMMNAMADYIMKHHAD-HSGIIYCLSKKDAETVSEDLSERR 439
Query: 340 ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETY 399
I YHAD+ + +E +H RW + ++V+ T+AFG+GI+K DVRFV+HH++ KSV+
Sbjct: 440 IKTGVYHADIGDSQKETLHQRWRQGLVKVVCATIAFGLGIDKGDVRFVLHHTIPKSVQGL 499
Query: 400 YQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV 459
YQESGRAGRDG ++C+L++RP D R S + E ++DI+R++Q + +
Sbjct: 500 YQESGRAGRDGHDADCVLYYRPQDFTRLSQLTVQEKGSRAKIHDILRFAQ-----TLTEC 554
Query: 460 RLVIFEK 466
R ++F K
Sbjct: 555 RNILFAK 561
>gi|320581820|gb|EFW96039.1| ATP-dependent helicase [Ogataea parapolymorpha DL-1]
Length = 1277
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/372 (45%), Positives = 234/372 (62%), Gaps = 10/372 (2%)
Query: 65 AVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
A + + G FEW + V N F +P++R NQ E INA LSG DV V+M GGGKSLCYQ
Sbjct: 500 AYKKFMGKFEWTTEVYSVLRNTFKLPSFRENQLEAINATLSGEDVFVLMPTGGGKSLCYQ 559
Query: 125 LPAVLREGIA----LVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LPA+++ GI +V+SPL+SL+QDQV L I A M+ S +S K + G
Sbjct: 560 LPALVKSGITSGTTIVISPLISLMQDQVHHLLQNQIKAAMINSKSSASQRKQTFDLFVNG 619
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
L ++Y++PE IS S + + H L+ + +DEAHC S WGHDFRPDYK L
Sbjct: 620 F--LDLVYLSPEMISASGMVRNAIATLHKKKMLARVVVDEAHCVSSWGHDFRPDYKALSY 677
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
KT++P++PMMALTATA + V+ D++ L+++ F + NR NL+Y V K K V
Sbjct: 678 FKTEYPEIPMMALTATANEHVRMDIIHNLNLKHPKFFKQSFNRSNLYYEVLPKK---KTV 734
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
++EIA+ I Y N +GI+YC S+ CEQ A L GI D+YHA M + R++V +
Sbjct: 735 VEEIAQLINRKYKNM-TGIIYCHSKNSCEQTATRLADYGIKCDFYHAGMTQDDRQRVQLG 793
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W N++QVI T+AFGMGI+KPDVRFVIH +L +++E YYQE+GRAGRDG S+C++++
Sbjct: 794 WQTNEIQVICATIAFGMGIDKPDVRFVIHLTLPRNLEGYYQETGRAGRDGKHSDCIMYYS 853
Query: 421 PADVPRQSSMVF 432
D M+
Sbjct: 854 MRDARTLQGMIM 865
>gi|392337763|ref|XP_003753349.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 181/385 (47%), Positives = 244/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 654 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 713
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 714 QVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 773
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 774 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQRFPSVPVMALTATANPRVQKDIL 833
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV +D + ++I++ +P +SGI+YC SRK
Sbjct: 834 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVALDCL-EWIRKHHP-YDSGIIYCLSRK 890
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 891 ECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVR 950
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FV+H SL KSVE YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 951 FVVHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTRETH 1010
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
+ NLY +V Y + NI + R +
Sbjct: 1011 VNNLYSMVHYCE-----NITECRRI 1030
>gi|392344358|ref|XP_003748936.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 181/385 (47%), Positives = 244/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 654 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 713
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 714 QVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 773
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 774 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQRFPSVPVMALTATANPRVQKDIL 833
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV +D + ++I++ +P +SGI+YC SRK
Sbjct: 834 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVALDCL-EWIRKHHP-YDSGIIYCLSRK 890
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 891 ECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVR 950
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FV+H SL KSVE YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 951 FVVHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTRETH 1010
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
+ NLY +V Y + NI + R +
Sbjct: 1011 VNNLYSMVHYCE-----NITECRRI 1030
>gi|440468642|gb|ELQ37793.1| RecQ helicase MUSN [Magnaporthe oryzae Y34]
gi|440478855|gb|ELQ59654.1| RecQ helicase MUSN [Magnaporthe oryzae P131]
Length = 1780
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 179/356 (50%), Positives = 235/356 (66%), Gaps = 14/356 (3%)
Query: 79 ADDVRLNV---FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG--- 132
++DVR + F + +R NQ E INA LSG+D V+M GGGKSLCYQLPAV+ G
Sbjct: 857 SNDVRKALKDHFRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVNNGATR 916
Query: 133 -IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYV 189
I +VVSPLLSL+QDQV L + I A + K + I AL E LK+LYV
Sbjct: 917 GITIVVSPLLSLMQDQVDHLRDINIQAAQFSGDIDKTHKNMILDALNNKNPENFLKLLYV 976
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
TPE ISKS F + L++ + +L+ IDEAHC SQWGHDFRPDYK LG L+ FP+VP
Sbjct: 977 TPEMISKSVTFTNALQRTYRNKKLARFVIDEAHCVSQWGHDFRPDYKALGELRRMFPNVP 1036
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATAT+ V D+ L I C F + NRPNL+Y VR K GK ++ IA+ IQ
Sbjct: 1037 VMALTATATKNVIVDVKSNLGIDGCEVFSQSFNRPNLYYDVRPK---GKNLLQSIAELIQ 1093
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQV 368
E + + ++GI+Y +RK E +A++L Q GISA+ YHA M+ + + + +W + ++V
Sbjct: 1094 ERHAD-QTGIIYTLARKSSENIAKKLVQTYGISAEAYHAGMETDKKTDIQRKWQRGTIKV 1152
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V T+AFGMGI+KPDVRFVIH SL KS+E YYQE+GRAGRDG S+C L+F D+
Sbjct: 1153 VVATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRAGRDGEKSDCYLYFGYGDI 1208
>gi|432088961|gb|ELK23146.1| ATP-dependent DNA helicase Q1 [Myotis davidii]
Length = 489
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 179/401 (44%), Positives = 259/401 (64%), Gaps = 30/401 (7%)
Query: 161 LTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDE 220
+T++ +E K+++ + +LK++YVTPEKI+KSK FMS+LEK + A R + I++DE
Sbjct: 1 MTASLEQEHVKWVHAEMVNKNSKLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDE 60
Query: 221 AHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVST 280
HCCS WGHDFRPDYK LGILK QFP+ ++ LTATAT V D ++L + KC F ++
Sbjct: 61 VHCCSHWGHDFRPDYKALGILKRQFPNTALIGLTATATSHVLKDAQKILCVEKCFTFTAS 120
Query: 281 INRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGI 340
NRPNL+Y VR+K S + I++I K I Y +SGI+YCFS+K+ EQV L++ GI
Sbjct: 121 FNRPNLYYEVRQKPSNTEDFIEDIVKVINGRY-KGQSGIIYCFSQKDSEQVTGSLQKLGI 179
Query: 341 SADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYY 400
A YHA+M+ + KVH RWS N++QV+V TVAFGMGI+KPDVRFVIHHS+SKS+E YY
Sbjct: 180 RAGAYHANMEPEDKTKVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYY 239
Query: 401 QESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVR 460
QESGRAGRD ++C+L++ D+ R SSMV EN G Q LY++V Y Q NI K R
Sbjct: 240 QESGRAGRDDTKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQ-----NISKCR 294
Query: 461 LVI----FEKL---QQVNLFCMVV----------LAGHAQCIISLLQDIQDNNQRLTMLQ 503
V+ F+++ + N C + + + +I +LQ ++ N++LT L+
Sbjct: 295 RVLIAQHFDEVWNSEACNKMCDNCCKDISFERKNVTAYCRDLIKILQQAEEMNEKLTPLK 354
Query: 504 LVD----KMKIKLK---EIDSDLKREEIEQLVLQLIIDRVL 537
L+D + KL+ + L RE++E+++ ++ + L
Sbjct: 355 LIDSWMGRGAAKLRVAGVVPPTLPREDLEKIIAHFLLQQYL 395
>gi|410080512|ref|XP_003957836.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
gi|372464423|emb|CCF58701.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
Length = 873
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 196/512 (38%), Positives = 291/512 (56%), Gaps = 57/512 (11%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WSG + + NVF +P +R++Q INA LSG DV ++M GGGKSLCYQLP++
Sbjct: 216 WSGELVYKLQ------NVFKLPNFRSDQLSAINATLSGDDVFILMPTGGGKSLCYQLPSI 269
Query: 129 LREGIA----LVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
+R G+ +V+SPL+SL+QDQ+ L L I A ++S S F + G+L
Sbjct: 270 IRSGVTCGTTIVISPLISLMQDQIDHLLQLNIKACSISSKLSTSQRNFYFSLF--ANGDL 327
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
+LY++PE ++ SK+F + L+K H + +L+ I++DEAHC S WGHDFRPDYKNL +
Sbjct: 328 DLLYISPEMLTASKKFKTTLDKLHKSRKLARIAVDEAHCLSNWGHDFRPDYKNLDYFRIN 387
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+P++ALTATA VQ+D++ L + + + + NR NLFY V K K+V +I
Sbjct: 388 YPDIPIVALTATANNLVQDDIIRNLRLGRPLVLKQSFNRNNLFYEVLPKDK--KIVTSQI 445
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
A YI + S+SGIVYC S+ CE+V+ L Q G+ A +YHA M R+ V W N
Sbjct: 446 ASYILNDFK-SQSGIVYCHSKDTCEKVSMALTQMGVKASFYHAGMTNKQRDHVQKLWQSN 504
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+ QVI TVAFGMGI+K DVRFVIH+++ +S+E YYQE+GRAGRDG S C+ F+ DV
Sbjct: 505 RYQVICATVAFGMGIDKADVRFVIHYTVPRSLEGYYQETGRAGRDGNFSYCITFYSFNDV 564
Query: 425 PRQSSMVFYEN--------SGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF--- 473
++ + + L L ++ Y + ++ +++ L F + VNL
Sbjct: 565 RSLQKLIQTDKGLNKENKLTHLDKLQHVMAYCENTINCRRKQI-LSYFNEEFDVNLCHKN 623
Query: 474 ---CMVVLAGHAQC-----------IISLLQDIQDNNQRLT------------MLQLVDK 507
C+ + G++ II+L+Q IQ N+R+T M ++V
Sbjct: 624 CDNCLRNVDGNSNVVESDVTDASISIINLVQSIQ--NERVTIIYCQDILRGSKMTKIVQA 681
Query: 508 MKIKLKE--IDSDLKREEIEQLVLQLIIDRVL 537
KL E I K+E +E++ L+ +L
Sbjct: 682 GHDKLPEHGILKSNKKENLERIFFHLVTKNIL 713
>gi|389625891|ref|XP_003710599.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
gi|351650128|gb|EHA57987.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
Length = 1780
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 179/356 (50%), Positives = 235/356 (66%), Gaps = 14/356 (3%)
Query: 79 ADDVRLNV---FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG--- 132
++DVR + F + +R NQ E INA LSG+D V+M GGGKSLCYQLPAV+ G
Sbjct: 857 SNDVRKALKDHFRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVNNGATR 916
Query: 133 -IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYV 189
I +VVSPLLSL+QDQV L + I A + K + I AL E LK+LYV
Sbjct: 917 GITIVVSPLLSLMQDQVDHLRDINIQAAQFSGDIDKTHKNMILDALNNKNPENFLKLLYV 976
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
TPE ISKS F + L++ + +L+ IDEAHC SQWGHDFRPDYK LG L+ FP+VP
Sbjct: 977 TPEMISKSVTFTNALQRTYRNKKLARFVIDEAHCVSQWGHDFRPDYKALGELRRMFPNVP 1036
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATAT+ V D+ L I C F + NRPNL+Y VR K GK ++ IA+ IQ
Sbjct: 1037 VMALTATATKNVIVDVKSNLGIDGCEVFSQSFNRPNLYYDVRPK---GKNLLQSIAELIQ 1093
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQV 368
E + + ++GI+Y +RK E +A++L Q GISA+ YHA M+ + + + +W + ++V
Sbjct: 1094 ERHAD-QTGIIYTLARKSSENIAKKLVQTYGISAEAYHAGMETDKKTDIQRKWQRGTIKV 1152
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+V T+AFGMGI+KPDVRFVIH SL KS+E YYQE+GRAGRDG S+C L+F D+
Sbjct: 1153 VVATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRAGRDGEKSDCYLYFGYGDI 1208
>gi|401827051|ref|XP_003887618.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
gi|392998624|gb|AFM98637.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
Length = 766
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 171/354 (48%), Positives = 236/354 (66%), Gaps = 5/354 (1%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VF + +R NQ+E+I A LSG+DV V+M GGGKS+CYQLPA++ EGI +VVSPLLSL+Q
Sbjct: 232 VFKMKEFRMNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYEGITIVVSPLLSLVQ 291
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ+ L I A + S S+ + +++ L E K+ YVTPE I+KS F +
Sbjct: 292 DQIRNLLEKDILALPINSNLSRTERSLVFEVLGSEELICKIFYVTPELIAKSGHFHDVVS 351
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
GRL IDEAHC SQWGHDFRPDYK LG ++ ++P VP++ALTATAT+KV+ D+
Sbjct: 352 GLVRRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSIRARYPSVPIIALTATATKKVELDI 411
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L IR C F + NR NL Y VR K+S ++ +I ++Q +P+ GI+YC S+
Sbjct: 412 LENLGIRGCETFKMSFNRSNLRYEVRAKTSTVEL---DIVSFVQTHFPDC-CGIIYCTSK 467
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
KECE ++ L++ +A +YHA + N R V +W+K + +VIV T+AFGMGI+K DVR
Sbjct: 468 KECEMISDRLKKYMKTA-FYHAGLSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVR 526
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FVIH+ + KS+E YYQE+GRAGRDGL S C+LF+ D + S M+ + G +
Sbjct: 527 FVIHYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKGDGGYE 580
>gi|149690733|ref|XP_001502766.1| PREDICTED: Bloom syndrome protein [Equus caballus]
Length = 1421
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 182/385 (47%), Positives = 241/385 (62%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 669 FGLHHFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 728
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R ++ LE
Sbjct: 729 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLITTLEN 788
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 789 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 848
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 849 TQLKILSPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 905
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR+ V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 906 ECDTMADTLQKDGLAALAYHAGLSDSARDAVQHKWINQDGCQVICATIAFGMGIDKPDVR 965
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 966 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILMEKDGNHHTKETH 1025
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1026 FNNLYSMVHYCE-----NIAECRRI 1045
>gi|154324014|ref|XP_001561321.1| hypothetical protein BC1G_00406 [Botryotinia fuckeliana B05.10]
Length = 1677
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 164/353 (46%), Positives = 236/353 (66%), Gaps = 9/353 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W + + F + +R NQ E INA L+GRD ++M GGGKSLCYQLPA+++
Sbjct: 796 WSNDVKKALKDRFRLKGFRHNQLEAINATLAGRDAFILMPTGGGKSLCYQLPAIVQSGKT 855
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
+G+ +VVSPLL+L+ DQV L L I A++ S +++E + ++ L K E +++LY
Sbjct: 856 KGVTIVVSPLLALMHDQVDHLHKLRIQAYLFNSESTQETRQQLFNGLNERKPEQFVELLY 915
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE I+KS SKL+ + RL+ I IDEAHC SQWGHDFRPDYKNL L+ ++P V
Sbjct: 916 VTPEMINKSNAIQSKLDDLYAKKRLARIVIDEAHCVSQWGHDFRPDYKNLHELRGRYPGV 975
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV--VIDEIAK 306
P +ALTATAT++V+ D++ L ++ C + + NRPN++Y VR K+ G + EI K
Sbjct: 976 PFIALTATATERVKKDVIHNLGMQNCEQLKQSFNRPNIYYEVRRKTGKGSTAAMFSEITK 1035
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
+ Y N +SGI+YC SR CE+VA++LR++GI A ++HA M ++ +W +
Sbjct: 1036 MLSVDYKN-QSGIIYCLSRDNCEEVAKKLREQGIRAHHFHAHMTPEEKKDTQHKWQIGSI 1094
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
QV+V T+AFGMGI+K +VRFVIH+ L K++E YYQE+GRAGRDG P+ C L++
Sbjct: 1095 QVVVATIAFGMGIDKQNVRFVIHYCLPKTLEGYYQETGRAGRDGKPAACFLYY 1147
>gi|425778070|gb|EKV16215.1| RecQ family helicase MusN [Penicillium digitatum Pd1]
gi|425780607|gb|EKV18613.1| RecQ family helicase MusN [Penicillium digitatum PHI26]
Length = 1426
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 171/357 (47%), Positives = 233/357 (65%), Gaps = 9/357 (2%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WS W V + F + +R NQ E I+A L+G+D ++M GGGKSLCYQLP+V
Sbjct: 552 WS-NHPWSQEVRKVLKDRFHLRGFRPNQLEAIDATLAGKDTFILMPTGGGKSLCYQLPSV 610
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE- 183
+ G+ +V+SPLLSL++DQV L L + A M+ T+ E++ +I L GE
Sbjct: 611 VTGGSTTGVTIVISPLLSLMEDQVSHLQKLKVKAFMINGDTNPEEKSWIMSQLTNAGGEG 670
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
+++LY+TPE +SKS+ + LEK H RL+ + IDEAHC SQWGHDFRPDYK LG ++
Sbjct: 671 MEVLYITPEMLSKSQALIRALEKLHGRNRLARLVIDEAHCVSQWGHDFRPDYKELGEVRA 730
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
+FP VP+MALTATAT+ V+ D+M L I C F+ + NRPNL Y VR K +V+
Sbjct: 731 RFPGVPVMALTATATENVKVDVMHNLKITDCEVFLQSFNRPNLTYEVRSKGKNDEVLA-S 789
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWS 362
+A+ I SY N + GI+YC SRK CE+ A++LR + + A YHA M A+ + W
Sbjct: 790 MAETISSSYRN-QCGIIYCLSRKTCEKTAEDLRTKYRLKAQAYHAGMSATAKTEAQRNWQ 848
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
++ +IV T+AFGMGI+K DVRFV+HHS+ KS+E YYQE+GRAGRDG S C L+F
Sbjct: 849 MGRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQETGRAGRDGKRSGCYLYF 905
>gi|291410501|ref|XP_002721547.1| PREDICTED: Bloom syndrome protein [Oryctolagus cuniculus]
Length = 1414
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 244/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 665 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACISPGVTIVISPLRSLIVD 724
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 725 QVQKLTSLDIPATYLTGDKTDSEAASIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 784
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 785 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 844
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 845 TQLKIVRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 901
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 902 ECDTMADTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 961
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ------ 439
FVIH SL KSVE YYQESGRAGRDG S C+LF+ DV R ++ E G Q
Sbjct: 962 FVIHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLILMEKDGNQHTRETH 1021
Query: 440 --NLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1022 FNNLYSMVHYCE-----NITECRRI 1041
>gi|410907219|ref|XP_003967089.1| PREDICTED: Bloom syndrome protein homolog [Takifugu rubripes]
Length = 1392
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 228/633 (36%), Positives = 337/633 (53%), Gaps = 83/633 (13%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D V+M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 639 FGLHQFRYNQLEAINATLQGEDTFVLMPTGGGKSLCYQLPACVSPGVTVVISPLKSLIVD 698
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ L L IPA L+ + + IY L + E +K+LYVTPEK+S S + +S L+
Sbjct: 699 QIQKLTTLDIPATSLSGDLGEREAGRIYMQLSRKEPIVKLLYVTPEKVSASNKLISALQN 758
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L+ IDEAHC SQWGHDFRPDYK L L+ +FP VPMMALTATAT +VQ D+
Sbjct: 759 LYERGLLARFVIDEAHCVSQWGHDFRPDYKKLHELRKKFPQVPMMALTATATPRVQKDIH 818
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L++ + F + NR NL Y V K K V ++ +I++ YP +SGI+YC SR
Sbjct: 819 NQLNMNRPQVFTMSFNRTNLKYAVLPKKP--KKVDEDCISWIKKHYPR-DSGIIYCLSRN 875
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
+C+ +A+ L++ G+ A YHA + RE V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 876 DCDAMAESLQRAGLLALSYHAGLSDGNREYVQTKWINQDGCQVICATIAFGMGIDKPDVR 935
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KSVE YYQESGRAGRDG S C+LF+ ADV R ++ + G
Sbjct: 936 YVIHASLPKSVEGYYQESGRAGRDGEISHCILFYSYADVHRIKRIISMDREGDSQTKATH 995
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC---------------MVVLAGHA 482
NL+ +V + + + ++ L F +L+ FC +
Sbjct: 996 YNNLHSMVHFCENSMECRRIQL-LAYFGELKFNRSFCKEHADVSCDNCAKPNQYKMRNVT 1054
Query: 483 QCIISLLQDIQDN-------------NQRLTMLQLVD--------KMKIKLKEIDSDLKR 521
+ + +++ +Q+N RLT+ LVD K++ + + R
Sbjct: 1055 EDVKKIVRFVQENCEKVGTRYGRTPQQNRLTLNMLVDIFIGSKSAKVQTGMYGMGGAYSR 1114
Query: 522 EEIEQLVLQLIIDRVL---------------VRIGPFSPGKKIIKLEI--------SSVQ 558
++L +L++D VL + GP + ++++ SS++
Sbjct: 1115 HNADRLFKRLVLDNVLMEDLYITNGGQAVCYISAGPNATNVLFGQMQVEFYETESASSIR 1174
Query: 559 KNTADNKK--STKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPST 616
K+ A K S + LE EL L K+L + GI +++ S+ +R I+ + S
Sbjct: 1175 KHKAAVAKNVSQREQKVQECLE-ELTNLCKQLGK-AFGIHYYNIFSTSSLRKIAEKLSSE 1232
Query: 617 MEEASSNHLEKIIG--KLKTGKYGSRILEVISK 647
EE L +I G + + KYG+ +++V+ K
Sbjct: 1233 PEE-----LLQIDGVTEDRLEKYGAEVIQVLQK 1260
>gi|345315332|ref|XP_001515695.2| PREDICTED: Bloom syndrome protein [Ornithorhynchus anatinus]
Length = 865
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 244/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+++V+SPL SLI D
Sbjct: 83 FGLHHFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACISPGVSIVISPLRSLIVD 142
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 143 QVQKLTSLDIPATYLTGDKTDSEAASIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 202
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 203 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNVLRQKFPSVPVMALTATANPRVQKDIL 262
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I K F + NR NL Y V K KV D ++ +I++ +P +SGI+YC SR+
Sbjct: 263 TQLKILKPQVFSMSFNRHNLKYDVLPKKP-KKVAFDCLS-WIRKHHP-YDSGIIYCLSRR 319
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A LR+ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 320 ECDTMALTLRKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVR 379
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 380 YVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYSYHDVIRLKRLILMEKDGNSHTRQTH 439
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 440 FNNLYSMVHYCE-----NIAECRRI 459
>gi|302414652|ref|XP_003005158.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
gi|261356227|gb|EEY18655.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
Length = 1714
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/345 (50%), Positives = 226/345 (65%), Gaps = 11/345 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F + +R NQ E INA L+G+D V+M GGGKSLCYQLPAV+ +GI +VVSPLLS
Sbjct: 816 FRMRGFRTNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAVVTSGKTKGITVVVSPLLS 875
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG--EGELKMLYVTPEKISKSKRF 200
L+QDQV L ALGI A +S + I + + + + MLYV+PE ++ S +F
Sbjct: 876 LMQDQVDHLTALGIKAKAFSSAIQAPARREILEFMNSPYPDHQFTMLYVSPEMLNASAQF 935
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
L + +L+ +DEAHC SQWGHDFRPDYK+L L++ +P VP++ALTATAT
Sbjct: 936 ERALTNVYRNQKLARFVVDEAHCVSQWGHDFRPDYKDLFKLRSNYPSVPIIALTATATTN 995
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V D+ L I KC F + NRPNL Y V K K +I+ IA+ IQ Y N+++GI+
Sbjct: 996 VIVDIQHNLQIDKCQVFTQSFNRPNLTYAVERKE---KGLIETIAQLIQSKY-NNQTGII 1051
Query: 321 YCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
Y SRK E VA +LR GISA +YHA M + V RW K ++V+V T+AFGMGI
Sbjct: 1052 YVLSRKNTEDVATKLRDNYGISASHYHAAMKPEEKWNVQRRWQKGSIKVVVATIAFGMGI 1111
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+KPDVRFVIHHSL KS+E YYQE+GRAGRDG PS+C+L+F DV
Sbjct: 1112 DKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKPSDCILYFGYGDV 1156
>gi|158290315|ref|XP_311930.4| AGAP002967-PA [Anopheles gambiae str. PEST]
gi|157017834|gb|EAA07614.4| AGAP002967-PA [Anopheles gambiae str. PEST]
Length = 1425
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/394 (45%), Positives = 246/394 (62%), Gaps = 17/394 (4%)
Query: 70 SGTFEWDSRADDVRLNV-----FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
+G F+ S A RL V FG+ +R Q ++INA L G D V+M GGGKSLCYQ
Sbjct: 627 TGEFDGMSYAHSARLQVAFKETFGLRTFRPIQLQVINATLLGNDCFVLMPTGGGKSLCYQ 686
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPAVL G+ +VVSPL SLI DQV L +L IPA L+ + D + IY L EL
Sbjct: 687 LPAVLTVGLTIVVSPLKSLILDQVQKLNSLDIPAGHLSGEANMADVQRIYDDLYSSCPEL 746
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
K+LYVTPEKIS S +F + L + L I IDEAHC S WGHDFRPDYK L L+ Q
Sbjct: 747 KLLYVTPEKISSSAKFQNLLSALYRRSLLGRIVIDEAHCVSAWGHDFRPDYKKLSALREQ 806
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIK-FVSTINRPNLFYMVREKSSVGKVVIDE 303
FP VP++ALTATA +V+ D++ L + + + F+ + NRPNL Y+V K V E
Sbjct: 807 FPTVPIIALTATANPRVRMDILAQLKLARDTRWFLCSFNRPNLKYLVLPKKGVSTKA--E 864
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
+ + I++ +P ++GIVYC S+KEC+Q+A E R+ GI A YHA + RE W
Sbjct: 865 MIELIRKRFPR-DTGIVYCLSKKECDQLADEFRRAGIKAKSYHAGLSDGVREATQKEWIG 923
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
++++V+ T+AFGMGI+KPDVR+V+H+ + KS+E YYQESGRAGRDG + C+L++ +D
Sbjct: 924 DRIKVVCATIAFGMGIDKPDVRYVLHYCMPKSIEGYYQESGRAGRDGEIATCVLYYNYSD 983
Query: 424 VPRQSSMVFYENS--------GLQNLYDIVRYSQ 449
+ R M+ + S + NL+ +V Y +
Sbjct: 984 MLRYRKMMDNDTSISLEAKQIHMNNLFRMVNYCE 1017
>gi|427712781|ref|YP_007061405.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427376910|gb|AFY60862.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 732
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 232/341 (68%), Gaps = 9/341 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG A+R Q EIINA L+ +DVL I+ GGGKS+C+QLPA+L+ G+ LVVSPL++L+
Sbjct: 9 HYFGYEAFRPGQAEIINASLNQQDVLAILPTGGGKSICFQLPALLKPGVTLVVSPLIALM 68
Query: 145 QDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSK 203
DQV+ L GIPA L ST + E I+ L GE+K+LYV PE++ S F +
Sbjct: 69 LDQVLALQKNGIPATFLNSTLAAAEARARIHSILN---GEVKLLYVAPERLV-SDSFTAL 124
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
L H ++ +DEAHC S+WGHDFRPDY+ L L+ FP +PMMALTATAT V+
Sbjct: 125 LANIHQTVGIASFVVDEAHCVSEWGHDFRPDYRQLSRLRELFPSIPMMALTATATHCVRA 184
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D+ E L +++ V++ NRPNL+Y V EKS GKV + E+ +YI+++ SGI+YC
Sbjct: 185 DITEQLSLKQPFIHVASFNRPNLYYEVIEKSR-GKVSLSELTRYIKKT---EGSGIIYCM 240
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SRK E++A EL + GISA YHA ++ + R R+ ++ +Q++V TVAFGMGINKPD
Sbjct: 241 SRKNVEKLASELNENGISALPYHAGLNNDTRTDHQTRFIRDDVQIMVATVAFGMGINKPD 300
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
VRFVIH+ L +++E YYQESGR GRDG P+ C LFF P D+
Sbjct: 301 VRFVIHYDLPQTIEGYYQESGRGGRDGEPARCTLFFSPGDI 341
>gi|212529002|ref|XP_002144658.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
gi|210074056|gb|EEA28143.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
Length = 1573
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/528 (37%), Positives = 294/528 (55%), Gaps = 43/528 (8%)
Query: 50 ASRGSPIQYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDV 109
ASR +Q + N +F W V + F + +R +Q E INA L G+D
Sbjct: 664 ASRQPQLQPTQKPTVPDSNSMLSFAWSKDVKTVLRDRFHLKGFRPHQLEAINATLGGKDA 723
Query: 110 LVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTT 165
V+M GGGKSLCYQLP+V+ +G+ +VVSPLLSL++DQV L LGI A+ +
Sbjct: 724 FVLMPTGGGKSLCYQLPSVIHSGRTKGVTIVVSPLLSLMEDQVDHLQKLGIKAYFINGDV 783
Query: 166 SKEDEKFIYKALEK--GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHC 223
S E ++++ AL + E+++LYVTPE I+K+ L+ H + + + IDEAHC
Sbjct: 784 SSEHKRWVMSALASPYADREIELLYVTPEMINKNVTLCDILKTLHDNRKFARLVIDEAHC 843
Query: 224 CSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINR 283
SQWGHDFRPDYK LG +++F +P+MALTATAT+ V+ D++ L ++ C + NR
Sbjct: 844 VSQWGHDFRPDYKELGAFRSKFSGLPVMALTATATENVKIDVINNLRMKDCEVLSQSFNR 903
Query: 284 PNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQ-RGISA 342
PNL Y V K +I +IA I+ SY ++GIVYC SRK+CE+VAQEL Q I A
Sbjct: 904 PNLTYDVLPKKGSAPDIISQIADIIETSY-RRKAGIVYCLSRKDCEKVAQELSQGYNIKA 962
Query: 343 DYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQE 402
+YHA M R V W + VIV T+AFGMGI+KPDVRFVIHH++ KS+E YYQE
Sbjct: 963 THYHAGMPSEERTSVQRDWQAGRYDVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQE 1022
Query: 403 SGRAGRDGLPSECLLFFRPADVPRQSSMV-------FYENSGLQNLYDIVRYSQYPLHWN 455
+GRAGRDG S C LF+ D Q + +N Q L +V++ + +
Sbjct: 1023 TGRAGRDGKRSGCYLFYSYRDTAAQKRFIEQSEGDWQQKNRQRQMLRHVVQFCEN--QSD 1080
Query: 456 IEKVRLVIF--------------EKLQQVNLFCMVVLAGHAQCIISLLQDIQDNNQRLTM 501
+V+++ + + + F + + +A+ I L++ + + +T+
Sbjct: 1081 CRRVQILAYFNESFSVSDCHRTCDNCKTDEAFQTIDFSTYAKKAIQLVKFFHERGEDVTI 1140
Query: 502 LQLVD-------KMKIKLKEID-----SDLKREEIEQLVLQLIIDRVL 537
L +D KMK ++ ++L+ ++E+L +L+ + VL
Sbjct: 1141 LHCIDIFAGSNKKMKGDHAQVPQYGAGTELELGDVERLFFKLVGEDVL 1188
>gi|261289349|ref|XP_002603118.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
gi|229288434|gb|EEN59129.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
Length = 666
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/390 (46%), Positives = 242/390 (62%), Gaps = 13/390 (3%)
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
++GT F SR + VFG+ +R NQ E NA L G+D ++M GGGKSLCYQLPA
Sbjct: 1 FNGTHFPHSSRMTSLFNKVFGLHRFRTNQLEACNAALLGKDCFILMPTGGGKSLCYQLPA 60
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ G+ +V+SPL SLIQDQV L L +PA L+ S++ +Y L + + K+L
Sbjct: 61 IVSGGVTIVISPLKSLIQDQVSKLNGLEVPAAHLSGELSQQVASGVYMDLARRTPQTKLL 120
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPEK+S S++ +S L+ + G L IDEAHC SQWGHDFRPDYK L +L+ FP
Sbjct: 121 YVTPEKVSSSEKLLSTLKSLYQRGLLDRFVIDEAHCVSQWGHDFRPDYKKLCVLRKSFPG 180
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VPMMALTATAT +V+ D++ L + FV + NR NL Y V K K E+ +
Sbjct: 181 VPMMALTATATPRVRRDILHQLGMTDPRWFVQSFNRTNLHYSVMPKKV--KSATKEVLEL 238
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I + S++GIVYC SRKECE V+ EL + G SA YHA M R ++ W ++ +
Sbjct: 239 INSRF-RSKTGIVYCLSRKECETVSDELCRNGTSACAYHAGMSDKERARIQDLWPEH-YK 296
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VI T+AFGMGI+KPDVRFVIH+SL KSVE YYQESGRAGRDG S+C+LF+ D R
Sbjct: 297 VICATIAFGMGIDKPDVRFVIHYSLPKSVEGYYQESGRAGRDGEASDCILFYNYHDKMRM 356
Query: 428 SSMVFYENSG--------LQNLYDIVRYSQ 449
++ + + NL +V+Y +
Sbjct: 357 QKLIHMDKEATYESRKVHMDNLLRMVQYCE 386
>gi|167535712|ref|XP_001749529.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771921|gb|EDQ85580.1| predicted protein [Monosiga brevicollis MX1]
Length = 2199
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/345 (48%), Positives = 232/345 (67%), Gaps = 6/345 (1%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R +Q E +NA L G+D V+M GGGKSLCYQLPAV G+ +V+SPL+SLIQD
Sbjct: 605 FGLHRFRPHQLEAVNAALLGQDCFVLMPTGGGKSLCYQLPAVTSRGVTVVISPLISLIQD 664
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L ALGI L+ST S+ ++ +++ L + +LY+TPE++ KS E
Sbjct: 665 QVAGLQALGIRVLFLSSTQSRAEQNEVHRQLCADAVQDDLLYITPERL-KSSMMRQTFES 723
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H G L+ IDEAHC SQWGHDFRPDYK L I++ FP VP+MALTATAT +V+ D++
Sbjct: 724 LHARGLLARFVIDEAHCVSQWGHDFRPDYKELQIVRQWFPRVPLMALTATATPRVKEDVL 783
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
+L +++ + F S+ NR NLFY VR K K + +IA + ++ SGIVYC SR+
Sbjct: 784 NILGMQRAVTFQSSFNRTNLFYEVRPKK---KSLFADIAAIVAKN--RGSSGIVYCMSRR 838
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+ E A +L++RGI A YHA +D R +V W++++ +I T+AFGMGI+KPDVR+
Sbjct: 839 DAETTALDLQRRGIKALAYHAGLDPGLRSEVQDVWARSRADIICATIAFGMGIDKPDVRY 898
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
VIH +L KS+E YYQE+GRAGRDG P++C+LF+ AD R M+
Sbjct: 899 VIHATLPKSMEGYYQEAGRAGRDGQPAQCILFYTFADKARHEFMI 943
>gi|346979414|gb|EGY22866.1| ATP-dependent helicase SGS1 [Verticillium dahliae VdLs.17]
Length = 1518
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/345 (50%), Positives = 225/345 (65%), Gaps = 11/345 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F + +R NQ E INA L+G+D V+M GGGKSLCYQLPAV+ +GI +VVSPLLS
Sbjct: 621 FRMRGFRTNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAVVTSGKTKGITVVVSPLLS 680
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG--EGELKMLYVTPEKISKSKRF 200
L+QDQV L ALGI A +S + I + + + + MLYV+PE ++ S +F
Sbjct: 681 LMQDQVDHLTALGIKAKAFSSAIQAPARREILEFMNSPYPDHQFTMLYVSPEMLNASAQF 740
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
L + +L+ +DEAHC SQWGHDFRPDYK+L L++ +P VP++ALTATAT
Sbjct: 741 ERALANVYRNQKLARFVVDEAHCVSQWGHDFRPDYKDLFKLRSNYPSVPIIALTATATTN 800
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V D+ L I KC F + NRPNL Y V K K +I+ IA+ IQ Y N ++GI+
Sbjct: 801 VIVDIQHNLQIDKCQVFTQSFNRPNLTYAVERKE---KGLIETIAQLIQSKYDN-QTGII 856
Query: 321 YCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
Y SRK E VA +LR GISA +YHA M + V RW K ++V+V T+AFGMGI
Sbjct: 857 YVLSRKNTEDVATKLRDNYGISASHYHAAMKPEEKWNVQRRWQKGSIKVVVATIAFGMGI 916
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+KPDVRFVIHHSL KS+E YYQE+GRAGRDG PS+C+L+F DV
Sbjct: 917 DKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKPSDCILYFGYGDV 961
>gi|226693393|ref|NP_031576.4| Bloom syndrome protein homolog isoform 1 [Mus musculus]
Length = 1419
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 674 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 733
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 734 QVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 793
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 794 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 853
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 854 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 910
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 911 ECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVR 970
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 971 FVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETH 1030
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
+ NLY +V Y + NI + R +
Sbjct: 1031 VNNLYSMVHYCE-----NITECRRI 1050
>gi|91075962|ref|XP_969092.1| PREDICTED: similar to MGC131022 protein [Tribolium castaneum]
gi|270014620|gb|EFA11068.1| hypothetical protein TcasGA2_TC004664 [Tribolium castaneum]
Length = 608
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/431 (41%), Positives = 264/431 (61%), Gaps = 12/431 (2%)
Query: 7 LQELENVEAE----VRLVQEQIKQLVDRQDQLYERQSELKSL--LEAFEASRGSPIQYGG 60
+ ELE E++ LV+ KQL D + + S L+ L L++ E +R +
Sbjct: 1 MNELEKAESDCAKKAELVKSLEKQLADAKAAYAKASSTLEELKRLKSLEENR----KRIA 56
Query: 61 SSSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGK 119
+ + +W F W ++ + F +RA Q INA LS +DVL++M GGGK
Sbjct: 57 LTEDTLSDWLEEKFPWSAQLKSLLKEKFKFDHFRAKQLAAINATLSKKDVLLVMPTGGGK 116
Query: 120 SLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK 179
SL +QLPA++ G LVV+PL+SLIQDQ++ L I A + ++TSK + K IY ++
Sbjct: 117 SLVFQLPALIDPGFTLVVTPLVSLIQDQLVALEKFKIEAATIHASTSKSEIKEIYDSMTS 176
Query: 180 GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
+ LK+LYVTPE I++SK+FMS L+KC+ A R++ ++IDE HCCS WGHDFRPDY LG
Sbjct: 177 KKSALKLLYVTPEWIARSKKFMSVLKKCYEAKRVARVAIDEVHCCSTWGHDFRPDYPYLG 236
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
++++ VP + LTATAT V ND+ ML++ C+ + NRPNLFY V K +
Sbjct: 237 LVRSLLEKVPFLGLTATATMSVLNDVQTMLNLENCLIITAPFNRPNLFYQVLPKPATKDG 296
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHM 359
V++ + K + E Y +SGI+Y + EC +A L+ + +HA ++ ++K+H
Sbjct: 297 VLNYLEKLMTEKYAG-QSGIIYTNTINECISLATALKGSNLRVAPFHAQLEPEQKKKIHR 355
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+W N Q +V TVAFGMGI+KPDVRFVIHH + +S+E+ YQESGRAGRDG ++C++ F
Sbjct: 356 KWLDNTYQAVVATVAFGMGIDKPDVRFVIHHVIPRSMESLYQESGRAGRDGKRADCIVLF 415
Query: 420 RPADVPRQSSM 430
D + S+M
Sbjct: 416 SLNDYLKISAM 426
>gi|148675035|gb|EDL06982.1| Bloom syndrome homolog (human), isoform CRA_a [Mus musculus]
Length = 1420
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 675 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 734
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 735 QVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 794
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 795 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 854
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 855 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 911
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 912 ECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVR 971
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 972 FVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETH 1031
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
+ NLY +V Y + NI + R +
Sbjct: 1032 VNNLYSMVHYCE-----NITECRRI 1051
>gi|110225360|ref|NP_001035992.1| Bloom syndrome protein homolog isoform 2 [Mus musculus]
gi|5921178|sp|O88700.1|BLM_MOUSE RecName: Full=Bloom syndrome protein homolog; Short=mBLM; AltName:
Full=RecQ helicase homolog
gi|3452495|emb|CAB10933.1| BLM protein [Mus musculus]
gi|162318414|gb|AAI57096.1| Bloom syndrome homolog (human) [synthetic construct]
Length = 1416
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 671 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 730
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 731 QVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 790
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 791 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 850
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 851 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 907
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 908 ECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVR 967
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 968 FVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETH 1027
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
+ NLY +V Y + NI + R +
Sbjct: 1028 VNNLYSMVHYCE-----NITECRRI 1047
>gi|388581963|gb|EIM22269.1| ATP-dependent DNA helicase [Wallemia sebi CBS 633.66]
Length = 1115
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/352 (45%), Positives = 233/352 (66%), Gaps = 8/352 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL--- 129
+ W + V ++F + A+R NQ+E I+A L +DV V+M GGGKS+CYQ+PA +
Sbjct: 355 YPWSRDVEKVMHDMFKLNAFRKNQREAIDATLDAKDVFVLMPTGGGKSVCYQIPACVDLG 414
Query: 130 -REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
G+++V+SPLLSLIQDQV L + +P++ + T+ D++ I L + + ++LY
Sbjct: 415 KTHGVSIVISPLLSLIQDQVQQLVSKDVPSYAYSGGTALADKRAIQDDLRRPKPITRLLY 474
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE + +S F L++ H +L+ +DEAHC SQWGHDFRPDY NLG L+ FP V
Sbjct: 475 VTPEMLGQSNAFKDILKQLHAKDQLARFVVDEAHCVSQWGHDFRPDYTNLGQLRDDFPGV 534
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P MALTATA ++V++D+ L ++ C++ S+ NR NLFY ++ K+ GK V +I I
Sbjct: 535 PFMALTATANERVKSDIKNSLRMKGCVELKSSFNRKNLFYEIKPKN--GKTVYADIQNLI 592
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
+ ++GI+YC S++ CE VA +LR G+ A +YHA + + R K+ + W KN+
Sbjct: 593 NNKF-RGQTGIIYCSSKRACEDVASKLRHEYGLPAQHYHAGLSRDDRTKIQINWQKNRFL 651
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+I TVAFGMGI+KPDVRFVIH S+ +S+E YYQE+GRAGRDG S C+L+F
Sbjct: 652 IICATVAFGMGIDKPDVRFVIHFSMPQSLEGYYQETGRAGRDGEHSNCILYF 703
>gi|3370996|dbj|BAA32001.1| mBlm [Mus musculus]
Length = 1416
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 671 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 730
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 731 QVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 790
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 791 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 850
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 851 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 907
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 908 ECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVR 967
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 968 FVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETH 1027
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
+ NLY +V Y + NI + R +
Sbjct: 1028 VNNLYSMVHYCE-----NITECRRI 1047
>gi|148675036|gb|EDL06983.1| Bloom syndrome homolog (human), isoform CRA_b [Mus musculus]
Length = 1417
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 243/385 (63%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 672 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 731
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 732 QVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 791
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 792 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 851
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 852 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 908
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 909 ECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVR 968
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S C+LF+ DV R ++ E G
Sbjct: 969 FVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETH 1028
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
+ NLY +V Y + NI + R +
Sbjct: 1029 VNNLYSMVHYCE-----NITECRRI 1048
>gi|298708608|emb|CBJ26095.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1537
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/384 (46%), Positives = 239/384 (62%), Gaps = 26/384 (6%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
++FG +R Q+E+I + G+DV V+M GGGKSLCYQLPA G+A+V SPL+SL+
Sbjct: 586 DIFGHAKFRTGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLV 645
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDE-KFIYKALEKGE--GELKMLYVTPEKISKSKRFM 201
QDQV + A G+ A + S + E + + L + + G LK+LY+TPEK +S
Sbjct: 646 QDQVAQMRATGVEAAYINSEQDYDSEVRVVMDQLYRLQDYGGLKLLYITPEKFCRSPSMN 705
Query: 202 SKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKV 261
L++ H G LS IDEAHC S WGHDFRPDY LGIL+ FPDVP+MALTATA V
Sbjct: 706 KALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVV 765
Query: 262 QNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVY 321
++D + L +R + NRPNL Y +R K + V+DEIAK +Q S+P +SGIVY
Sbjct: 766 RDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKA---AVLDEIAKVMQ-SFPG-QSGIVY 820
Query: 322 CFSRKECEQVAQEL---------RQRG-ISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
C SRK+CE+VA L RG D+YHAD + +VH WS ++ +I
Sbjct: 821 CLSRKDCEKVASGLLKKLSETTGGHRGRFRVDFYHADRTAAEKARVHREWSAGRIHLICA 880
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
T+AFGMGINKPDVR+VIHHS+ K++ +YQESGRAGRDGL S+C++FF D R +MV
Sbjct: 881 TIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMV 940
Query: 432 FYE--------NSGLQNLYDIVRY 447
+ S LQ +Y VR+
Sbjct: 941 NRDKSLPFQRRQSNLQEVYKCVRF 964
>gi|312373074|gb|EFR20899.1| hypothetical protein AND_18334 [Anopheles darlingi]
Length = 1384
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/386 (45%), Positives = 240/386 (62%), Gaps = 12/386 (3%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
+ SR V FG+ +R NQ ++INA L GRD V+M GGGKSLCYQLPA+L G
Sbjct: 585 YPHSSRLQMVFKETFGLRTFRPNQLQVINATLLGRDCFVLMPTGGGKSLCYQLPALLTTG 644
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
+ +VVSPL SLI DQV L L IPA L+ D + IY L LK+LYVTPE
Sbjct: 645 VTIVVSPLKSLILDQVQKLNTLDIPAGSLSGEAQMADVQRIYDDLYSSCPVLKLLYVTPE 704
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
KIS S +F + L H +L I IDEAHC S WGHDFRPDYK L +L+ QFPDVP++A
Sbjct: 705 KISSSAKFQNLLSALHRRRQLGRIVIDEAHCVSAWGHDFRPDYKRLYMLREQFPDVPIIA 764
Query: 253 LTATATQKVQNDLMEMLHIRKCIK-FVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
LTATA +V+ D++ L ++ + F+S+ NRPNL Y+V K G E+ I+
Sbjct: 765 LTATANTRVRMDVITQLKLQPDTRWFLSSFNRPNLKYLVLPKK--GASTKGEMINLIKAK 822
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+ ++GIVYC S+KEC+Q+A + R+ GI A YHA + RE W ++++V+
Sbjct: 823 FAR-DTGIVYCLSKKECDQLATDFRKAGIKAKSYHAGLTDTIREATQKEWIGDRIKVVCA 881
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
T+AFGMGI+KPDVR+V+H+ + KS+E YYQESGRAGRDG + C+L++ +D+ R M+
Sbjct: 882 TIAFGMGIDKPDVRYVLHYCMPKSIEGYYQESGRAGRDGEIATCILYYNYSDMQRYRKMM 941
Query: 432 FYENS--------GLQNLYDIVRYSQ 449
+ S + NL +V Y +
Sbjct: 942 DNDTSISFEAKQIHMNNLLRMVNYCE 967
>gi|396484512|ref|XP_003841962.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
gi|312218537|emb|CBX98483.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
Length = 1753
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/430 (42%), Positives = 261/430 (60%), Gaps = 13/430 (3%)
Query: 2 ETEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGS 61
E E+ L E+ N+E + + + + Q R+ ++ + + P+
Sbjct: 750 EEEDFLHEISNIENQAPSGFDWKGERTNTQAST-SREVFRETNANTIQPPKTHPLPKKPQ 808
Query: 62 SSTAVENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+N+ G F W + + FG+ +R Q E IN L G V+M GGGKS
Sbjct: 809 MDIRAKNYPGMDFPWSQDLRNALVRRFGLRGFRPGQLEAINTTLGGEHCFVLMPTGGGKS 868
Query: 121 LCYQLPAVLR----EGIALVVSPLLSLIQDQVM-CLAALGIPAHMLTSTTSKEDEKFIYK 175
LCYQLP+V+ G+ +VVSPLLSL++DQV C G+ A ++ ++ + I
Sbjct: 869 LCYQLPSVITSGKTRGVTIVVSPLLSLMEDQVAACEQRFGMQAFLINGESTAAQKNMIMD 928
Query: 176 ALEKGEGE--LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRP 233
AL++ + + +++LYVTPE +SK++R + L++ H G L+ I IDEAHC SQWGHDFRP
Sbjct: 929 ALKERDPQKFIQILYVTPEMLSKNQRMVGTLQQLHSRGHLARIVIDEAHCVSQWGHDFRP 988
Query: 234 DYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREK 293
DYK LG + QFP VP++ALTATAT V+ D++ L I+ C +F + NRPNL Y V K
Sbjct: 989 DYKALGDVVRQFPGVPVIALTATATSLVRTDVVANLGIQGCRQFSQSFNRPNLSYEVLPK 1048
Query: 294 SSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINA 353
S K V++ IA+ I++ Y + +SGI+YC SRK CE VA++L G+ A +YHA M+
Sbjct: 1049 S---KGVVNSIAELIKDRY-SKKSGIIYCLSRKSCEDVAKKLSDLGLKAFHYHAGMESAE 1104
Query: 354 REKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPS 413
R V +W N+ VIV T+AFGMGI+K DVR+VIHH+L KS+E YYQE+GRAGRDG S
Sbjct: 1105 RSAVQRKWQSNEYHVIVATIAFGMGIDKADVRYVIHHTLPKSLEGYYQETGRAGRDGKRS 1164
Query: 414 ECLLFFRPAD 423
EC L+++ D
Sbjct: 1165 ECYLYYQYTD 1174
>gi|401401364|ref|XP_003880993.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
gi|325115405|emb|CBZ50960.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
Length = 1699
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 177/372 (47%), Positives = 250/372 (67%), Gaps = 6/372 (1%)
Query: 63 STAVENWSG--TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
+TA NW G +FEWDS+ VFG ++R Q+ IINAVLS RDV V+M GGGKS
Sbjct: 641 NTASRNWEGDRSFEWDSKIHQCNQEVFGNRSFRPMQRAIINAVLSQRDVFVMMPTGGGKS 700
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LC+QLPAV+ G+ +VV PL+SLI DQ+ + L + + E++K +Y L +G
Sbjct: 701 LCFQLPAVVSGGVTVVVMPLVSLITDQLEQMQLLNVGCRAFAANQPWEEQKAVYDELRRG 760
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+GE+ +L VTPEK+ S S L + + GRL +IDEAHC SQWG+DFRPDY+ L
Sbjct: 761 DGEINLLLVTPEKLKGSSLLRSCLHELNREGRLDRFAIDEAHCVSQWGNDFRPDYRQLQS 820
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
L+ ++P+VP++ALTATAT+ V D++ L +++ + F + +RPNL Y VR K V K +
Sbjct: 821 LREEYPNVPLVALTATATKAVLQDVIAQLRMQEPVVFQGSFDRPNLRYEVRPK--VTKRI 878
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHM 359
I++IA I+ + + SGIVYC SR+ECE+VA+ L++ ISA +YHA +D RE++
Sbjct: 879 IEDIATTIKTEF-DGLSGIVYCLSRRECERVAEGLQKHARISAGFYHAQLDPEKREEIQR 937
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
W + ++VIV T+AFGMGINK DVRFVIH ++ K +E +YQESGRAGR+G + C+LF+
Sbjct: 938 DWMNDDIKVIVATLAFGMGINKRDVRFVIHCAMPKCLENFYQESGRAGRNGDEASCILFY 997
Query: 420 RPADVPRQSSMV 431
D RQS ++
Sbjct: 998 NYHDKQRQSHLI 1009
>gi|328770877|gb|EGF80918.1| hypothetical protein BATDEDRAFT_10941 [Batrachochytrium
dendrobatidis JAM81]
Length = 573
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/356 (48%), Positives = 232/356 (65%), Gaps = 8/356 (2%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
TF W + V VF + +R NQ E INA L+ D ++M GGGKSLCYQLPA
Sbjct: 25 TFPWTKQVFKVLQEVFHLTDFRQNQLESINATLNSIDCFILMPTGGGKSLCYQLPACCTT 84
Query: 132 G----IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
G + +V+SPLLSLIQDQV L L I A ++S S ED+++ Y L K KM+
Sbjct: 85 GKTTGLTVVISPLLSLIQDQVSRLVQLNILAIAISSDMSAEDKRWAYDELRKEPLPPKMI 144
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPE + +S +F + L GRL+ +DEAHC SQWGHDFRPDYK L L+ Q+P
Sbjct: 145 YVTPELVMRSGQFKTALNDLFRRGRLARFVVDEAHCVSQWGHDFRPDYKELSTLRVQYPT 204
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP++ALTATA KV+ D++++L+I +C KF + NR NL Y VR+K K + +I +
Sbjct: 205 VPIIALTATANDKVKMDIIKVLNIPQCAKFQQSFNRSNLRYDVRKKD---KGLDADITAF 261
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+ YPN+ SGI+YC SRK CE + +L + GI A +YHA +D R ++ W+ N +
Sbjct: 262 IKTFYPNA-SGIIYCSSRKACEATSAKLCKLGIKAAFYHAGLDKEDRSRIQTAWATNSVH 320
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
+IV T+AFGMGI+K DVRFVIH+S+ +S+E YYQE+GRAGRDG S C+L++ D
Sbjct: 321 IIVATIAFGMGIDKGDVRFVIHYSIPQSLEGYYQETGRAGRDGKDSMCILYYAYKD 376
>gi|395324100|gb|EJF56547.1| ATP-dependent DNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 817
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/549 (38%), Positives = 304/549 (55%), Gaps = 64/549 (11%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQL-YERQSELKSLLEAFEASRGSPIQYGGSSSTAV 66
++LE+++ E+ V+ QIK L +L R +L+ + EA P S
Sbjct: 30 KDLESLDDEIAGVERQIKDLQALLQELKRNRDEKLRDIREAH------PQHRSDRSKAPA 83
Query: 67 EN--WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
N +SG FEW D VFG ++R+ Q+ I NA L RD++ IM GGGKSL YQ
Sbjct: 84 GNIDYSGEFEWTGALYDKLKTVFGFDSFRSCQESICNANLDRRDIVAIMPTGGGKSLGYQ 143
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEK----- 179
LPA+L G LV+SPLL+LI DQVM L G+ A MLT TSKE++ IY+ L+
Sbjct: 144 LPALLTPGCTLVISPLLALIADQVMHLHEAGVDAVMLTGATSKEEQNRIYQRLQAMANGT 203
Query: 180 -GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
G ++K+ YVTPEKI+ SK+F + L+K H +L+ IDEAHC SQ GHDFRPDY+ L
Sbjct: 204 PGAPDIKLCYVTPEKIANSKKFKAALDKLHRVHKLARFVIDEAHCVSQQGHDFRPDYQKL 263
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRK---------CIKFVSTINRPNLFYM 289
+L+ +P VP +AL+AT V DL+ L +R+ + F +++ R NL Y
Sbjct: 264 NVLRELWPGVPFLALSATCPAAVLGDLLRTLGMRRPTHAQAVDETVIFSTSLYRKNLHYA 323
Query: 290 VREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQ---RGISADYYH 346
V K S G I+++ YI + N ++GIVYC +RK+CE VA++L + I YH
Sbjct: 324 VLPKPSSGTGSIEKMRDYILTHHRN-DTGIVYCLTRKDCESVAEDLMRLSDGAIRTGVYH 382
Query: 347 ADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRA 406
AD+ +E +H +W + K++V+ T+AFG+GI+K DVRFV+HH SKS++ +YQESGRA
Sbjct: 383 ADVADAKKEALHRQWREGKVKVVCATIAFGLGIDKGDVRFVVHH--SKSLDGFYQESGRA 440
Query: 407 GRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYS---------QYPLHWN-I 456
GRDG ++C+L++R D R +S+ E G ++ ++ Q+ ++N
Sbjct: 441 GRDGKDADCVLYYRTQDAMRIASLTCNERGGQDKALAMLAFASDLEECRKIQFAQYFNKS 500
Query: 457 EKVRLVIFEKLQQ-VNLFCMVVLAGHA-QCIIS-----------------LLQDIQDNNQ 497
K+ L F ++ N C GH C+ + LL+ D +
Sbjct: 501 SKMSLSFFRTEEEDANTRC-----GHCDNCMRAPDTLERLGVRTRVAAWQLLRVAADAGR 555
Query: 498 RLTMLQLVD 506
LTM QL D
Sbjct: 556 ELTMTQLCD 564
>gi|332238724|ref|XP_003268551.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Nomascus
leucogenys]
Length = 1417
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 240/385 (62%), Gaps = 17/385 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G + +SPL SLI D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGDTIEISPLRSLIVD 722
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
V L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 723 PVQKLTSLDIPATYLTGDKTDSETTNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 782
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + IL+ +FP VP+MALTATA +VQ D++
Sbjct: 783 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNILRQKFPSVPVMALTATANPRVQKDIL 842
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 843 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 899
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 900 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVR 959
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 960 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1019
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1020 FNNLYSMVHYCE-----NITECRRI 1039
>gi|392585074|gb|EIW74415.1| ATP-dependent DNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 885
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 190/484 (39%), Positives = 290/484 (59%), Gaps = 38/484 (7%)
Query: 10 LENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA---- 65
L +++E+R ++I+Q + QL E +S + +E +R P G++S A
Sbjct: 58 LGQLDSEIREADDKIEQWKALRAQLVEEKSGVLIRIEQLNPAR--PTATNGTASGAKGKG 115
Query: 66 ---VENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
+ N+SG FEW+ + VFGI +R QQ + NA + GRD++ +M GGGKSL
Sbjct: 116 REVLINYSGEFEWNQQLKGTMRQVFGIREFRLCQQGVCNANMDGRDIVCVMPTGGGKSLT 175
Query: 123 YQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKED----EKFIYKALE 178
YQLPA+L G LV+SPL+SL+ DQ++ L I A MLTS T K E +Y A+
Sbjct: 176 YQLPALLAPGCTLVISPLISLMTDQILHLQENKIEAVMLTSATPKAQVNAAEARLY-AMA 234
Query: 179 KGEG--ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236
+G+ E+K+ YVTPE+I+K+K+F S L++ G+L+ I IDEAHC SQ GHDFRPDY+
Sbjct: 235 RGDADREIKLCYVTPERIAKNKKFSSLLQRLSDGGQLARIVIDEAHCVSQLGHDFRPDYQ 294
Query: 237 NLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIK-----------FVSTINRPN 285
L L+ F VP++AL+AT V D+++ L ++ + F + + R N
Sbjct: 295 KLSTLRQFFSQVPILALSATCPPAVMRDILKTLKMKPTVDGTAAPRDGTVCFTAPLYRKN 354
Query: 286 LFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQ---ELRQRGISA 342
L Y V K + K V+ +A YI+ ++ + ESGI+YC RK+ E VAQ EL + I
Sbjct: 355 LHYTVLPKPAASKDVLTVMADYIRFNHKD-ESGIIYCLKRKDAENVAQVLHELSKGQIKT 413
Query: 343 DYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQE 402
YHA++ +E +H +W +QV+ T+AFG+GI+K +VRFVIHH +K+++ YYQE
Sbjct: 414 GVYHAEVGDAEKEHLHKQWRSGAVQVVCATIAFGLGIDKGNVRFVIHH--TKTLDGYYQE 471
Query: 403 SGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLV 462
SGRAGRDG ++C+L++RP D Q+S+ F + G L D++ ++Q ++++ R +
Sbjct: 472 SGRAGRDGADADCVLYYRPQDAAHQASVSFSDKDGPSKLRDMLAFAQ-----DLQECRKI 526
Query: 463 IFEK 466
+F K
Sbjct: 527 LFAK 530
>gi|255932597|ref|XP_002557855.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582474|emb|CAP80660.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1511
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/357 (47%), Positives = 234/357 (65%), Gaps = 9/357 (2%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WS W V F + +R NQ E I+A L+G+D ++M GGGKSLCYQLP+V
Sbjct: 626 WS-NHPWSQEVRKVLKERFHLRGFRPNQLEAIDATLAGKDTFILMPTGGGKSLCYQLPSV 684
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE- 183
+ G+ +V+SPLLSL++DQV L L I A M+ T+ E++ +I L GE
Sbjct: 685 VTGGRTTGVTIVISPLLSLMEDQVSHLRKLNIKAFMVNGDTNPEEKSWIMSQLSNAAGEG 744
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
+++LY+TPE +SKS+ + LEK H RL+ + IDEAHC SQWGHDFRPDYK LG ++
Sbjct: 745 MEVLYITPEMLSKSQALIRALEKLHGRNRLARLVIDEAHCVSQWGHDFRPDYKELGEVRA 804
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
+FP VP+MALTATAT+ V+ D+M L I C F+ + NRPNL Y VR K +V+
Sbjct: 805 RFPGVPVMALTATATENVKVDVMHNLKITDCEVFLQSFNRPNLTYEVRSKGKNDEVLA-S 863
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWS 362
+A+ I SY N + GI+YC SRK C++VA++L+++ + A YHA M + + +W
Sbjct: 864 MAETITSSYQN-QCGIIYCLSRKTCDKVAEDLQKKYHLKALAYHAGMSAKVKSEAQRKWQ 922
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
++ +IV T+AFGMGI+K DVRFV+HHS+ KS+E YYQE+GRAGRDG S C L+F
Sbjct: 923 MGRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQETGRAGRDGKRSGCYLYF 979
>gi|269861548|ref|XP_002650477.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066069|gb|EED43580.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 166/339 (48%), Positives = 228/339 (67%), Gaps = 6/339 (1%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
+F + +R+NQ++II A L G DV V+M GGGKSLCYQLPA++ G+ +V+SPLLSLIQ
Sbjct: 272 IFRLDEFRSNQKKIIEASLRGDDVFVLMPTGGGKSLCYQLPALINVGLTIVISPLLSLIQ 331
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ+ L IPA L S + + IYK + + +++LYVTPE ++ S RF L+
Sbjct: 332 DQISSLLNKNIPAAALNSNCTVGERDLIYKCI-RDTNLIRLLYVTPELLNNSDRFKGILK 390
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ ++ IDEAHC SQWGHDFRPDYK L LK +P VP++ALTATAT+KV+ D+
Sbjct: 391 SLYCENKVCRFVIDEAHCVSQWGHDFRPDYKELSKLKQSYPTVPIIALTATATKKVEVDI 450
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ +L+I+ C F S+ NRPNL Y V K++ I +I +I Y +S GI+YC S+
Sbjct: 451 INVLNIQNCKIFKSSFNRPNLIYRVLPKTA---TTILDIVSFINSHYADS-PGIIYCTSK 506
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
KECE++A+EL R + YYH + R ++ +W+ +I+ TVAFGMGI+KPDVR
Sbjct: 507 KECEKMAEEL-SRDLKITYYHGGLSKYDRIRIQEQWNNKTYNIIIATVAFGMGIDKPDVR 565
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FVIH+SL KS+E YYQE+GRAGRDGL S C+L++ AD
Sbjct: 566 FVIHYSLPKSLEGYYQETGRAGRDGLESICILYYSYADT 604
>gi|440794542|gb|ELR15702.1| ATPdependent DNA helicase, RecQ subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 621
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 177/375 (47%), Positives = 243/375 (64%), Gaps = 14/375 (3%)
Query: 65 AVENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
A++NW F W + D V VF +R NQ+++IN VLSGRD VIM G GKSL Y
Sbjct: 103 AMQNWEAPGFPWADKVDHVLKTVFNHEQFRPNQRKVINCVLSGRDAFVIMPTGAGKSLLY 162
Query: 124 QLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTST-TSKEDEKFIYK------- 175
QLP V+ G LV+SPLLSLIQDQV L G+ A L+S+ T KE + + K
Sbjct: 163 QLPGVISNGFTLVISPLLSLIQDQVSALRKKGVVAVELSSSRTPKEVSQMLKKRHWYTNA 222
Query: 176 ALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDY 235
AL K + +K L+VTPE++ KS RF + L + RL+ + IDE HC SQWG+DFRPD+
Sbjct: 223 ALAK-DTNVKFLFVTPERVVKSTRFFAFLRQQVDQARLARVVIDECHCISQWGYDFRPDF 281
Query: 236 KNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSS 295
K L +L+ +FP+VP++ALT++AT + + D M L + +C F + NRPNL Y V K+
Sbjct: 282 KQLLVLRKEFPNVPILALTSSATNRCKVDTMRQLGLEECDFFTQSFNRPNLRYAVENKTK 341
Query: 296 VGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINARE 355
I + K NSESGI+YC S+KECE +A++L+ I A++YHA + RE
Sbjct: 342 KTTKKIIQFIKKKH----NSESGIIYCLSKKECEAMARKLQAAKIQANFYHAGLSPAKRE 397
Query: 356 KVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSEC 415
KV +W + V+V T+AFG+GI+K DVRFVIHHSL +++E +YQESGRAGRDGL ++C
Sbjct: 398 KVQRKWMAGEFAVMVATIAFGLGIDKADVRFVIHHSLPRTIEDFYQESGRAGRDGLNADC 457
Query: 416 LLFFRPADVPRQSSM 430
++F+R +D PR + M
Sbjct: 458 VVFYRHSDRPRHTFM 472
>gi|327265368|ref|XP_003217480.1| PREDICTED: Bloom syndrome protein homolog [Anolis carolinensis]
Length = 1383
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 180/372 (48%), Positives = 234/372 (62%), Gaps = 12/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQQE INA L G D V+M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 642 FGLHHFRTNQQEAINAALLGEDCFVLMPTGGGKSLCYQLPACILVGVTIVISPLRSLIVD 701
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L ++ IPA LT + + IY L K + +K+LYVTPEK+ S R MS LE
Sbjct: 702 QVQKLTSMDIPATYLTGDKTDAEASRIYMQLSKKDPIIKLLYVTPEKVCSSGRLMSTLEN 761
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK L +L+ +F VPMMALTATA +VQ D++
Sbjct: 762 LYQRQLLARFVIDEAHCVSQWGHDFRQDYKRLNMLRKKFASVPMMALTATANPRVQKDIL 821
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + K F + NR NL Y V K K V + ++I++ +P +SGI+YC SR
Sbjct: 822 NQLEMLKPQVFSMSFNRHNLKYDVLPKRP--KSVALDCLQWIRKYHP-YDSGIIYCLSRY 878
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G+SA YHA + R+ V +W +++ Q+I T+AFGMGI+KPDVR
Sbjct: 879 ECDSMASNLQKAGLSALAYHAGLPDETRDIVQQKWINQDGCQIICATIAFGMGIDKPDVR 938
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ +DV R ++ E G
Sbjct: 939 FVIHASLPKSIEGYYQESGRAGRDGERSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH 998
Query: 438 LQNLYDIVRYSQ 449
NLY +V Y +
Sbjct: 999 FNNLYSMVHYCE 1010
>gi|123494887|ref|XP_001326616.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121909533|gb|EAY14393.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1447
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 170/365 (46%), Positives = 236/365 (64%), Gaps = 13/365 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+++ ++V VF +R Q++ I A L+G DV V+M GGGKSLCYQLP ++ G+ +
Sbjct: 351 ETKINEVNKKVFKHSHFRGRQRDAIAAALNGEDVFVLMPTGGGKSLCYQLPGFIQMGVTI 410
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKI- 194
V+SPL+SLIQDQV L LG+ A T+ D I + + G L+ L++TPEKI
Sbjct: 411 VISPLISLIQDQVRSLTELGLDAMAYGQETTAADYNEIVRKI--NNGRLRFLFMTPEKIM 468
Query: 195 --SKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
S + RF+ + + RL+ ID+AHC SQWGHDFRPDY LG+LKT +PD+P+MA
Sbjct: 469 MGSINTRFIGSI---YEKKRLTRFVIDKAHCVSQWGHDFRPDYTQLGVLKTMYPDIPIMA 525
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ-ES 311
LTATAT VQ D+ E+L+IR C F S+ NRPN+FY V +K K DE+ ++I+
Sbjct: 526 LTATATDAVQRDIKEILNIRNCHVFKSSFNRPNIFYEVIQKEENSK---DEMIRWIKAHG 582
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
Y NS +GI++C + E ++Q + +G + YYH M+ R+KV W N+++VIV
Sbjct: 583 YENS-TGIIFCMTTPETVNLSQYMNTKGFNTAYYHGKMENADRKKVQEMWMNNQIRVIVA 641
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
T+AFGMGI+KPDVR+VIH ++ +S+E YYQESGRAGRDG S CLLFF D R ++
Sbjct: 642 TLAFGMGIDKPDVRYVIHMTMPRSLEAYYQESGRAGRDGKQSHCLLFFSMGDKARVHRLI 701
Query: 432 FYENS 436
Y S
Sbjct: 702 SYTES 706
>gi|255072509|ref|XP_002499929.1| predicted protein [Micromonas sp. RCC299]
gi|226515191|gb|ACO61187.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 454
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 180/383 (46%), Positives = 244/383 (63%), Gaps = 30/383 (7%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
FEW +RA V N F +R Q IN +SG D LV+M GGGKSLCYQLPAVL G
Sbjct: 5 FEWSARARQVLRNTFNAQDFRGMQLATINCTMSGEDSLVLMPTGGGKSLCYQLPAVLSPG 64
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKED---EKFIYKALEKGEGELKMLYV 189
+ +V+SPL+SLIQDQ+ L+ + IPA +L S KE + Y L ELK+LY+
Sbjct: 65 VTIVISPLVSLIQDQLHHLSEMNIPAGVLGSM-EKEGAAVQNQTYTQLR--NDELKLLYL 121
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
TPEKI+KS + M+ LE+ H+ G+LS I +DE HC S WGHDFR DY+ L ILK +F DVP
Sbjct: 122 TPEKIAKSNKLMNTLEQLHNRGKLSRIVVDEVHCISSWGHDFRKDYQALRILKNRFRDVP 181
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
++ LTATAT++VQ+D + L ++KC +F T NR N+ Y V+ K+ K ++ ++ I
Sbjct: 182 LVGLTATATKRVQDDCVRQLGLQKCTRFFQTFNRTNIVYEVKPKT---KDIVKDMKALIH 238
Query: 310 ESYPNS-----ESGIVYCFSRKECEQVAQELR---------QRGISADYYHADMDINARE 355
+ + N + GIVYCFS+K+CE++A+ L +G+ A YHA M R+
Sbjct: 239 DKFTNHRNGKVQCGIVYCFSQKDCEKMAESLTCKPNDDKRWPKGLLALPYHAGMTDTDRK 298
Query: 356 ------KVHMR-WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGR 408
++H R WS K+ +I TVAFGMGINKPDVRFV HHS+ KS+E Y+QESGRAGR
Sbjct: 299 TGVPKRELHQRMWSDGKVPIICATVAFGMGINKPDVRFVFHHSIPKSLEGYHQESGRAGR 358
Query: 409 DGLPSECLLFFRPADVPRQSSMV 431
DG S C LF++ D + +++
Sbjct: 359 DGGKSYCTLFYQAGDAVKMRALL 381
>gi|72393397|ref|XP_847499.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma brucei TREU927]
gi|62359597|gb|AAX80030.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei]
gi|70803529|gb|AAZ13433.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1548
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 182/425 (42%), Positives = 253/425 (59%), Gaps = 14/425 (3%)
Query: 11 ENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEA-FEASRGSPIQYGGSSSTAVENW 69
E VE +V + Q K + +S + LL+A S P+ +S+ +
Sbjct: 386 EVVEGKVAVYSAQFKG--GNNPNRFTWESCERELLDASLHGSNQDPVSIAKASTG---EF 440
Query: 70 SGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
SG + W ++VFG+ +R Q EI+NA ++ RDV V++ GGGKSLCYQLPA+
Sbjct: 441 SGEHYPWSEELRRTMVDVFGLHNFRFLQLEIMNACMANRDVFVLLPTGGGKSLCYQLPAL 500
Query: 129 LREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKM 186
L + +V+SPL+SLIQDQV L A +PA LT T + ++ G +
Sbjct: 501 LPNPAKVTIVISPLVSLIQDQVYALRAYDLPAMALTGQTLDAPRRDLFNEWSSGRIVCTL 560
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
+YVTPE +S F+ L+ + G L+ +DEAHC SQWGHDFRPDY+ L LK FP
Sbjct: 561 VYVTPEYFGRSDHFVQSLKSLENRGLLNRFVVDEAHCVSQWGHDFRPDYRKLAALKHHFP 620
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+ ALTATAT VQ D+++ L + + F + NR NL Y V+ +S + EI
Sbjct: 621 QVPISALTATATDTVQRDIIQTLGLHNAVSFKGSFNRHNLKYSVQRITSKAGSTVAEI-- 678
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
I++++P GIVYC S+K+CE++A LR+ GI A YYHAD + + + +W++++L
Sbjct: 679 -IKKNFPPRSCGIVYCISKKDCEEMAAVLRKEGIRASYYHADA--SEKNEKQEQWTRDEL 735
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
QV+ TVAFGMGINKPDVRFVIH ++ KS+E YYQESGRAGRDGL S+C L F D R
Sbjct: 736 QVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLSSKCFLLFAAGDRQR 795
Query: 427 QSSMV 431
M+
Sbjct: 796 HEQMI 800
>gi|344302418|gb|EGW32692.1| hypothetical protein SPAPADRAFT_49652 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1278
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 237/356 (66%), Gaps = 10/356 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV----LREGIALVVSPL 140
NVF + ++R+NQ E + A L +DV V+M GGGKSLCYQLPA+ L +G +V+SPL
Sbjct: 533 NVFKLNSFRSNQLEAVIASLLRKDVFVLMPTGGGKSLCYQLPALVKGGLTKGTTVVISPL 592
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
+SL+QDQV L L + M+ S + ++++ EG L ++Y++PE + KS F
Sbjct: 593 ISLMQDQVHHLEKLNVNVRMINSKGTADEKRHTMHLFR--EGLLDIVYLSPEMVIKSAMF 650
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+EK ++ G+L+ + IDEAHC S WGHDFRPDYK +G+ KT+FP+VP+MALTATA ++
Sbjct: 651 QKVIEKLYNEGQLARVVIDEAHCLSSWGHDFRPDYKGMGLFKTKFPNVPVMALTATANER 710
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V+ D++ L++ + F + NR NLFY V+ K++ +D I YI + N ++GI+
Sbjct: 711 VRADVITHLNLNNPVFFKQSFNRTNLFYEVQWKNANH---LDVIKDYIFRKFKN-KTGII 766
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC S++ CEQ +Q L Q G+ + YYHA M R +V +W +NK+ VI T+AFGMGI+
Sbjct: 767 YCHSKQSCEQTSQRLNQLGLHSAYYHAGMSSEDRIEVQTQWQENKVYVICATIAFGMGID 826
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS 436
KPDVRFVIH + +S+E YYQE+GRAGRDG PSECL+FF D SM+ + S
Sbjct: 827 KPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECLMFFNTRDAHHLRSMIIRDKS 882
>gi|261330758|emb|CBH13743.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei gambiense DAL972]
Length = 1548
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/425 (42%), Positives = 253/425 (59%), Gaps = 14/425 (3%)
Query: 11 ENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEA-FEASRGSPIQYGGSSSTAVENW 69
E VE +V + Q K + +S + LL+A S P+ +S+ +
Sbjct: 386 EVVEGKVAVYSAQFKG--GHNPNRFTWESCERELLDASLHGSNQDPVSIAKASTG---EF 440
Query: 70 SGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
SG + W ++VFG+ +R Q EI+NA ++ RDV V++ GGGKSLCYQLPA+
Sbjct: 441 SGEHYPWSEELRRTMVDVFGLHNFRFLQLEIMNACMANRDVFVLLPTGGGKSLCYQLPAL 500
Query: 129 LREG--IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKM 186
L + +V+SPL+SLIQDQV L A +PA LT T + ++ G +
Sbjct: 501 LPNPAKVTIVISPLVSLIQDQVYALRAYDLPAMALTGQTLDAPRRDLFNEWSSGRIVCTL 560
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
+YVTPE +S F+ L+ + G L+ +DEAHC SQWGHDFRPDY+ L LK FP
Sbjct: 561 VYVTPEYFGRSDHFVQSLKSLENRGLLNRFVVDEAHCVSQWGHDFRPDYRKLAALKHHFP 620
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+ ALTATAT VQ D+++ L + + F + NR NL Y V+ +S + EI
Sbjct: 621 QVPISALTATATDTVQRDIIQTLGLHNAVSFKGSFNRHNLKYSVQRITSKAGSTVAEI-- 678
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
I++++P GIVYC S+K+CE++A LR+ GI A YYHAD + + + +W++++L
Sbjct: 679 -IKKNFPPRSCGIVYCISKKDCEEMAAVLRKEGIRASYYHADA--SEKNEKQEQWTRDEL 735
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
QV+ TVAFGMGINKPDVRFVIH ++ KS+E YYQESGRAGRDGL S+C L F D R
Sbjct: 736 QVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLSSKCFLLFAAGDRQR 795
Query: 427 QSSMV 431
M+
Sbjct: 796 HEQMI 800
>gi|157278040|ref|NP_001098120.1| Bloom syndrome helicase [Oryzias latipes]
gi|140083401|gb|ABO84823.1| Bloom syndrome helicase [Oryzias latipes]
Length = 1393
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 231/636 (36%), Positives = 335/636 (52%), Gaps = 89/636 (13%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D V+M GGGKSLCYQLPA + G+ +VVSPL SLI D
Sbjct: 642 FGLHQFRFNQLEAINAALLGEDAFVLMPTGGGKSLCYQLPACVSPGVTVVVSPLKSLIVD 701
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ L L IPA L+ S + IY L + + +K+LYVTPEK+S S R +S L+
Sbjct: 702 QIQKLTTLDIPATSLSGDKSDSEAGRIYMQLSRKDPLIKLLYVTPEKVSASGRLISALQN 761
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L+ IDEAHC SQWGHDFRPD+K L L+ +FP V MMALTATAT +VQ D++
Sbjct: 762 LYERGLLARFIIDEAHCVSQWGHDFRPDFKRLHELRQKFPSVRMMALTATATPRVQKDIL 821
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L++ + F + NR NL Y V K K V ++ +I++ YP +SGIVYC SR
Sbjct: 822 NQLNMMRPQVFTMSFNRSNLKYSVLPKKP--KKVDEDCIGWIKKHYPR-DSGIVYCLSRN 878
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
+C+ +A+ L++ GI A YHA + RE V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 879 DCDAMAESLKRAGIQALSYHAGLSDGDREYVQSKWINQDGCQVICATIAFGMGIDKPDVR 938
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KSVE YYQESGRAGRDG S C+LF+ DV R ++ + G
Sbjct: 939 YVIHASLPKSVEGYYQESGRAGRDGEISHCILFYSYTDVHRIKRIISMDREGDSHTKATH 998
Query: 438 LQNLYDIVRYSQYPLHWNIEKVR----LVIFEKLQQVNLFC---------------MVVL 478
NL+ +V + + N+ + R L F +L FC +
Sbjct: 999 FNNLHSMVHFCE-----NVMECRRIQLLAYFGELNFNRNFCKDHPDVSCDNCAKPNQYQM 1053
Query: 479 AGHAQCIISLLQDIQDN-------------NQRLTMLQLVD--------KMKIKLKEIDS 517
+ + +++ +Q+N RLT+ LVD K++ + +
Sbjct: 1054 KNVTEDVKKIVRFVQENCEKVGSRFGKTAQQNRLTLNMLVDIFIGSKSAKIQTGMFGMGG 1113
Query: 518 DLKREEIEQLVLQLIIDRVLVR----------IGPFSPGKKIIKL-------------EI 554
R ++L +L+++ +LV + S G K + +
Sbjct: 1114 AYSRHNADRLFKKLVLENILVEDLYITNNGQAVSYISAGPKAMNVLSGYMQVDFYETESA 1173
Query: 555 SSVQKNTADNKKS-TKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARK 613
SS++K A KS ++R A EL +L KEL + G+ +++ S+ ++ I+ R
Sbjct: 1174 SSIRKQKAAVSKSVSQRDEMVQACLKELVDLCKELGK-AFGLHYYNIFSTATLKKIAERL 1232
Query: 614 PSTMEEASSNHLEKIIG--KLKTGKYGSRILEVISK 647
S E L +I G + K KYG+ +++V+ K
Sbjct: 1233 SSDPEV-----LLQIDGVTEDKLEKYGAEVIKVLQK 1263
>gi|196013025|ref|XP_002116374.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
gi|190580965|gb|EDV21044.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
Length = 752
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/392 (45%), Positives = 236/392 (60%), Gaps = 33/392 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA++ +G+ +V+SPL SLIQD
Sbjct: 78 FGLHKFRTNQLEAINAALLGYDCFILMPTGGGKSLCYQLPAIVNDGVTVVISPLRSLIQD 137
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L L P T + ++ +Y+ L K + +LY+TPEK+S S + +S L
Sbjct: 138 QVQGLLNLDFPVGQFTGEMTMKENNEMYQELYKRIPSISLLYLTPEKLSASSKLLSVLRS 197
Query: 207 CHHAGRLSLISIDEAHC---------CS-----------QWGHDFRPDYKNLGILKTQFP 246
H LS IDEAHC CS QWGHDFRPDYK L ++ FP
Sbjct: 198 LHLRKMLSRFVIDEAHCISQVTTYASCSLCIYNISCTYLQWGHDFRPDYKKLSAIRENFP 257
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+MALTATAT +V+ D++ L + I FV + NRPNL Y V K+ K EI K
Sbjct: 258 GVPVMALTATATPRVRKDILNQLKVPNPIWFVQSFNRPNLQYSVLPKN---KCTAQEIIK 314
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNK 365
+ + N ESGIVYC SR EC++V+ LR+ GI+A YHA +D R V RW ++N+
Sbjct: 315 IVNSQFRN-ESGIVYCLSRNECDRVSSTLREAGIAALSYHAGLDAKERTNVQKRWITENR 373
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
+++ T+AFGMGI+K DVRFVIH+SL KS E YYQESGRAGRDG+ ++C+LF+ D
Sbjct: 374 CKIVCATIAFGMGIDKADVRFVIHYSLPKSTEGYYQESGRAGRDGMLAKCILFYTYGDAC 433
Query: 426 RQSSMVFYENS--------GLQNLYDIVRYSQ 449
R M+ E L NLY +V+Y +
Sbjct: 434 RIRRMINSERDQNQETKRVHLDNLYRMVQYCE 465
>gi|269859903|ref|XP_002649675.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066870|gb|EED44340.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/339 (48%), Positives = 228/339 (67%), Gaps = 6/339 (1%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
+F + +R+NQ++II A L G DV V+M GGGKSLCYQLPA++ G+ +V+SPLLSLIQ
Sbjct: 272 IFRLDEFRSNQKKIIEASLRGDDVFVLMPTGGGKSLCYQLPALINVGLTIVISPLLSLIQ 331
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ+ L IPA L S + + IYK + + +++LYVTPE ++ S RF L+
Sbjct: 332 DQISSLLNKNIPAAALNSNCTVGERDLIYKCI-RDTNLIRLLYVTPELLNNSDRFKGILK 390
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ ++ IDEAHC SQWGHDFRPDYK L L+ +P VP++ALTATAT+KV+ D+
Sbjct: 391 SLYCENKVCRFVIDEAHCVSQWGHDFRPDYKELSKLRQSYPTVPIIALTATATKKVEVDI 450
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ +L+I+ C F S+ NRPNL Y V K++ I +I +I Y +S GI+YC S+
Sbjct: 451 INVLNIQNCKIFKSSFNRPNLIYRVLPKTA---TTILDIVSFINSHYADS-PGIIYCTSK 506
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
KECE++A+EL R + YYH + R ++ +W+ +I+ TVAFGMGI+KPDVR
Sbjct: 507 KECEKMAEEL-SRDLKITYYHGGLSKYDRIRIQEQWNNKTYNIIIATVAFGMGIDKPDVR 565
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FVIH+SL KS+E YYQE+GRAGRDGL S C+L++ AD
Sbjct: 566 FVIHYSLPKSLEGYYQETGRAGRDGLESICILYYSYADT 604
>gi|355672742|gb|AER95092.1| Bloom syndrome, RecQ helicase-like protein [Mustela putorius furo]
Length = 843
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/389 (46%), Positives = 243/389 (62%), Gaps = 21/389 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 85 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 144
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 145 QVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 204
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 205 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 264
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K K V + ++I++ +P+ +SGI+YC SR+
Sbjct: 265 TQLKILQPQVFSMSFNRHNLKYYVLPKKP--KKVAFDCLEWIRKHHPH-DSGIIYCLSRR 321
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 322 ECDTMADTLQKDGLAALAYHAGLSDSARDEVQHKWVNQDGCQVICATIAFGMGIDKPDVR 381
Query: 386 FVIHHSL----SKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG---- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 382 FVIHASLPKSVPKSVEGYYQESGRAGRDGETSHCLLFYTYHDVTRLKRLILMEKDGNHHT 441
Query: 438 ----LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 442 RETHFNNLYSMVHYCE-----NITECRRI 465
>gi|50292717|ref|XP_448791.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528104|emb|CAG61761.1| unnamed protein product [Candida glabrata]
Length = 1371
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/393 (43%), Positives = 249/393 (63%), Gaps = 28/393 (7%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLL 141
VF + ++R+NQ+E INA LSG+DV V+M GGGKSLCYQLPA+++ +G +V+SPL+
Sbjct: 622 VFNLTSFRSNQEEAINATLSGKDVFVLMPTGGGKSLCYQLPAIVKGGCTKGTTIVISPLI 681
Query: 142 SLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFM 201
SL+QDQV L L + A ML+S +++ + G L ++Y++PE IS S++
Sbjct: 682 SLMQDQVEHLQKLNVKARMLSSKGGIDEKNHTFNLF--INGFLDLIYLSPEMISVSEKCK 739
Query: 202 SKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKV 261
+ +EK + +L+ I +DEAHC S WGHDFRPDYK L K Q+PD+PMMALTATA+++V
Sbjct: 740 TAIEKLYQNKQLARIVVDEAHCVSNWGHDFRPDYKQLSYFKVQYPDIPMMALTATASEQV 799
Query: 262 QNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVY 321
Q D++ L ++ + + NR NL+Y VR+K+ K I EI I++ + N ++GI+Y
Sbjct: 800 QMDIVFNLKLKDNLFLRQSFNRTNLYYEVRKKT---KNTIFEICDTIKQQFRN-QTGIIY 855
Query: 322 CFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINK 381
C S+ CEQ AQ++++ GI YYHA M+ + R +V W + LQVI TVAFGMGI+K
Sbjct: 856 CHSKNSCEQTAQQMQRNGIKCAYYHAGMEADERLQVQREWQNDNLQVICATVAFGMGIDK 915
Query: 382 PDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNL 441
DVRFV H ++ +++E YYQE+GRAGRDG S C+ ++ DV +M+ + +NL
Sbjct: 916 ADVRFVFHFTVPRTLEGYYQETGRAGRDGNYSYCITYYSFRDVRTMQTMIQKD----KNL 971
Query: 442 YDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC 474
I + +KLQQV +C
Sbjct: 972 DGINKQKH--------------LDKLQQVTAYC 990
>gi|388853955|emb|CCF52453.1| related to SGS1-DNA helicase [Ustilago hordei]
Length = 1290
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/393 (45%), Positives = 239/393 (60%), Gaps = 26/393 (6%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL----REGIALVVSPLLS 142
F + +RA+Q E IN +L+ RDV V+M GGGKSLCYQLPA + +G+ +VVSPLLS
Sbjct: 417 FKLKLFRAHQLEAINHILNARDVFVLMPTGGGKSLCYQLPACVMQGKTDGLTVVVSPLLS 476
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
LIQDQV L +L IPA LT S D+ + +A G +++LY+TPE I +S + +
Sbjct: 477 LIQDQVRHLISLRIPATKLTGDMSSADKNKVCQAAIAGN--IRLLYLTPEYIRQSGQAKT 534
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
+ +++ +DEAHC SQWGHDFRP Y LG L+ +PDVP+MALTATA +V
Sbjct: 535 LFNDLYRQKKIARFIVDEAHCVSQWGHDFRPHYTELGELRLSYPDVPIMALTATANARVI 594
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+ E L ++ + NRPNL Y VR+K ++EI+ I S+ + GI+YC
Sbjct: 595 KDVKECLRMKNVEHISQSFNRPNLEYQVRKKPKTNVKAMEEISSLILTSH-KGQCGIIYC 653
Query: 323 FSRKECEQVAQELR-QRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINK 381
FSR+ CE VA +L Q GISA +YHA + + R V RW KN+ QVIV T+AFGMGI+K
Sbjct: 654 FSRESCETVAHDLSTQYGISAHHYHAKLSADDRAMVQQRWQKNEFQVIVATIAFGMGIDK 713
Query: 382 PDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNL 441
PDVRFVIHHS+ KS+E YYQE+GRAGRDG S C+L++ D+ + SM+ E Q
Sbjct: 714 PDVRFVIHHSVPKSLEGYYQETGRAGRDGKQSVCILYYSFGDISKMRSMIEKEEGKTQEA 773
Query: 442 YDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC 474
D E L Q++ FC
Sbjct: 774 KDRA------------------LESLDQISRFC 788
>gi|164423365|ref|XP_964030.2| hypothetical protein NCU08598 [Neurospora crassa OR74A]
gi|157070060|gb|EAA34794.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1955
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/362 (47%), Positives = 238/362 (65%), Gaps = 17/362 (4%)
Query: 73 FEWDSRADDVRL---NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
+ W ++DVR + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV+
Sbjct: 887 YAW---SNDVRKALKDRFRMSGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVV 943
Query: 130 R----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--EKGEGE 183
R GI +V+SPLLSL+ DQV LA L I A+ + E + +++ L E E E
Sbjct: 944 RSGKTRGITVVISPLLSLMLDQVNHLANLMIQAYAFNGDMNSEMRRMVFQKLDAEHPEHE 1003
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
L++LYVTPE +SK++ F++K+ + +L+ I IDEAHC SQWGHDFRPDYK +G +
Sbjct: 1004 LQLLYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRK 1063
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
+FP VP+MALTATATQ V D+ L + C F + NRPNL+Y VR K + +I
Sbjct: 1064 RFPGVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPNLYYEVRMKE---QNLIAR 1120
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHMRWS 362
IA+ I+E Y + ++GI+Y SRK E +A+ L+++ I A +YHA + + + V W
Sbjct: 1121 IAELIKEKY-DGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQ 1179
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
+++V+V T+AFGMGI+KPDVRFVIH + KS+E YYQE+GRAGRDG PS+C L+F
Sbjct: 1180 TGRVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYG 1239
Query: 423 DV 424
D+
Sbjct: 1240 DI 1241
>gi|6934278|gb|AAF31695.1|AF205407_1 QDE3 protein [Neurospora crassa]
Length = 1955
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/362 (47%), Positives = 238/362 (65%), Gaps = 17/362 (4%)
Query: 73 FEWDSRADDVRL---NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
+ W ++DVR + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV+
Sbjct: 887 YAW---SNDVRKALKDRFRMSGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVV 943
Query: 130 R----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--EKGEGE 183
R GI +V+SPLLSL+ DQV LA L I A+ + E + +++ L E E E
Sbjct: 944 RSGKTRGITVVISPLLSLMLDQVNHLANLMIQAYAFNGDMNSEMRRMVFQKLDAEHPEHE 1003
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
L++LYVTPE +SK++ F++K+ + +L+ I IDEAHC SQWGHDFRPDYK +G +
Sbjct: 1004 LQLLYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRK 1063
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
+FP VP+MALTATATQ V D+ L + C F + NRPNL+Y VR K + +I
Sbjct: 1064 RFPGVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPNLYYEVRMKE---QNLIAR 1120
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHMRWS 362
IA+ I+E Y + ++GI+Y SRK E +A+ L+++ I A +YHA + + + V W
Sbjct: 1121 IAELIKEKY-DGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQ 1179
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
+++V+V T+AFGMGI+KPDVRFVIH + KS+E YYQE+GRAGRDG PS+C L+F
Sbjct: 1180 TGRVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYG 1239
Query: 423 DV 424
D+
Sbjct: 1240 DI 1241
>gi|350295161|gb|EGZ76138.1| hypothetical protein NEUTE2DRAFT_97732 [Neurospora tetrasperma FGSC
2509]
Length = 1994
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/362 (47%), Positives = 238/362 (65%), Gaps = 17/362 (4%)
Query: 73 FEWDSRADDVRL---NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
+ W ++DVR + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV+
Sbjct: 921 YAW---SNDVRKALKDRFRMSGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVV 977
Query: 130 R----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--EKGEGE 183
R GI +V+SPLLSL+ DQV LA L I A+ + E + +++ L E E E
Sbjct: 978 RSGKTRGITVVISPLLSLMLDQVNHLANLMIQAYAFNGDMNSEMRRMVFQKLDAEHPEHE 1037
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
L++LYVTPE +SK++ F++K+ + +L+ I IDEAHC SQWGHDFRPDYK +G +
Sbjct: 1038 LQLLYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRK 1097
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
+FP VP+MALTATATQ V D+ L + C F + NRPNL+Y VR K + +I
Sbjct: 1098 RFPGVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPNLYYEVRMKE---QNLIAR 1154
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHMRWS 362
IA+ I+E Y + ++GI+Y SRK E +A+ L+++ I A +YHA + + + V W
Sbjct: 1155 IAELIKEKY-DGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQ 1213
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
+++V+V T+AFGMGI+KPDVRFVIH + KS+E YYQE+GRAGRDG PS+C L+F
Sbjct: 1214 TGQVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYG 1273
Query: 423 DV 424
D+
Sbjct: 1274 DI 1275
>gi|336465540|gb|EGO53780.1| hypothetical protein NEUTE1DRAFT_93386 [Neurospora tetrasperma FGSC
2508]
Length = 2005
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/362 (47%), Positives = 238/362 (65%), Gaps = 17/362 (4%)
Query: 73 FEWDSRADDVRL---NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
+ W ++DVR + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV+
Sbjct: 932 YAW---SNDVRKALKDRFRMSGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVV 988
Query: 130 R----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--EKGEGE 183
R GI +V+SPLLSL+ DQV LA L I A+ + E + +++ L E E E
Sbjct: 989 RSGKTRGITVVISPLLSLMLDQVNHLANLMIQAYAFNGDMNSEMRRMVFQKLDAEHPEHE 1048
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
L++LYVTPE +SK++ F++K+ + +L+ I IDEAHC SQWGHDFRPDYK +G +
Sbjct: 1049 LQLLYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRK 1108
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
+FP VP+MALTATATQ V D+ L + C F + NRPNL+Y VR K + +I
Sbjct: 1109 RFPGVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPNLYYEVRMKE---QNLIAR 1165
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHMRWS 362
IA+ I+E Y + ++GI+Y SRK E +A+ L+++ I A +YHA + + + V W
Sbjct: 1166 IAELIKEKY-DGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQ 1224
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
+++V+V T+AFGMGI+KPDVRFVIH + KS+E YYQE+GRAGRDG PS+C L+F
Sbjct: 1225 TGQVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYG 1284
Query: 423 DV 424
D+
Sbjct: 1285 DI 1286
>gi|301096912|ref|XP_002897552.1| bloom syndrome protein, DEAD/DEAH box helicase [Phytophthora
infestans T30-4]
gi|262107012|gb|EEY65064.1| bloom syndrome protein, DEAD/DEAH box helicase [Phytophthora
infestans T30-4]
Length = 400
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/375 (46%), Positives = 230/375 (61%), Gaps = 21/375 (5%)
Query: 104 LSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCL---AALGIPAHM 160
+ G D V+M GGGKSLCYQLPAVL +G+ +VVSPLLSLIQDQV L GIPA
Sbjct: 1 MRGEDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAF 60
Query: 161 LTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDE 220
LTS TS ++ I L++ +K+LY+TPEKI KS M L+ H L+ IDE
Sbjct: 61 LTSQTSLTLKRSITAELKRSAPSVKLLYLTPEKIIKSPEMMDLLKDLHRNKMLARFVIDE 120
Query: 221 AHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVST 280
AHC SQWGHDFRP+Y LG+LK FP VP+MALTATA KV + + + L I F +
Sbjct: 121 AHCVSQWGHDFRPEYNQLGLLKKTFPTVPLMALTATAPPKVIDHVKKSLLISNGHVFSMS 180
Query: 281 INRPNLFYMVREKSSVG-KVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG 339
NR NL + VR+K G K +D + + I ++YP GIVYC ++++CE VA L G
Sbjct: 181 FNRQNLTFEVRDKPRGGDKKALDALYQLISKTYPPDAVGIVYCMTKQDCENVANYLFDHG 240
Query: 340 ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETY 399
+SAD+YHA R V W +L ++ T+A+GMGINKPDVR+VIH S++KS+E Y
Sbjct: 241 LSADFYHAGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGY 300
Query: 400 YQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV 459
YQE+GRAGRDG PS+C+LF+ P DV + +++ G+ +K
Sbjct: 301 YQEAGRAGRDGKPSQCILFYSPRDVSKMRNILSMPQKGM-----------------TKKT 343
Query: 460 RLVIFEKLQQVNLFC 474
R V EKL+ + +C
Sbjct: 344 RAVHIEKLRSMAEYC 358
>gi|336265633|ref|XP_003347587.1| SGS1 protein [Sordaria macrospora k-hell]
gi|380096454|emb|CCC06502.1| putative SGS1 protein [Sordaria macrospora k-hell]
Length = 2276
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/362 (47%), Positives = 234/362 (64%), Gaps = 17/362 (4%)
Query: 73 FEWDSRADDVRLNV---FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
F W ++DVR + F + +R NQ E INA L G+D V+M GGGKSLCYQLPAV+
Sbjct: 1198 FPW---SNDVRKALKDRFRMAGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVV 1254
Query: 130 R----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG--EGE 183
+ GI +V+SPLLSL+ DQV L L I A+ + E + +++ L+ E E
Sbjct: 1255 KSGKTRGITVVISPLLSLMLDQVNHLKNLMITAYAFNGDMNAETRRMVFQKLDTPHPEHE 1314
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
L++LYVTPE +SK+ +F+ K+ + +L+ I IDEAHC SQWGHDFRPDYK +G +
Sbjct: 1315 LQLLYVTPEMVSKNMQFVGKMGDLYQRNKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRK 1374
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
+FP VP+MALTATAT V D+ L + C F + NRPNL+Y VR K + ++
Sbjct: 1375 RFPGVPVMALTATATHNVILDVKHNLAMDTCETFSQSFNRPNLYYEVRLKE---QNLVAR 1431
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWS 362
IA+ IQE Y + ++GI+Y SRK E +A+ L ++ GI A +YHA + + KV W
Sbjct: 1432 IAELIQEKY-DGQTGIIYTLSRKSAENIAKNLEEKHGIRAKHYHASITTEEKIKVQHDWQ 1490
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
++V+V T+AFGMGI+KPDVRFVIH + KS+E YYQE+GRAGRDG PS+C L+F
Sbjct: 1491 AGDVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYG 1550
Query: 423 DV 424
D+
Sbjct: 1551 DI 1552
>gi|391333104|ref|XP_003740962.1| PREDICTED: Bloom syndrome protein-like [Metaseiulus occidentalis]
Length = 1216
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 178/384 (46%), Positives = 238/384 (61%), Gaps = 14/384 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
TF + + N FG+ +R NQ++ INA L D V+M GGGKSLCYQLPA+ +
Sbjct: 551 TFHFSKDMHEKFHNFFGLTEFRHNQKQAINAALLNNDCFVLMPTGGGKSLCYQLPAICSK 610
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL SLI DQV L ++GIPA + S S ++ +Y+ L + E LK+LYVTP
Sbjct: 611 GVTVVVSPLKSLIYDQVTKLKSMGIPATAMMSEVS---DREVYEDLRRAEPLLKLLYVTP 667
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
EK++ S + EK H +L+ IDEAHC SQWGHDFR DY LG L+ FP VP+M
Sbjct: 668 EKLAASNLLKNTFEKLHRRNQLARFVIDEAHCVSQWGHDFRVDYHKLGQLRQTFPGVPIM 727
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA+ V+ D+++ L +++ F+ + NRPNL Y + + S V I K I
Sbjct: 728 ALTATASPSVRKDILKQLLMKEPKWFLQSFNRPNLRYQIVKYFSGSPVT--HIIKLISNK 785
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
Y +SGIVYC SRK+C+Q A +L GISA YHA M+ R + W + V+
Sbjct: 786 Y-FEKSGIVYCLSRKDCDQTAAKLESAGISAVSYHAGMNDAERSSIQDMWINGRKHVVCA 844
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
T+AFGMGI+K +VRFV H L KSVE YYQE+GRAGRDGLPS+C+LF+R AD R ++
Sbjct: 845 TIAFGMGIDKANVRFVFHTGLPKSVEGYYQETGRAGRDGLPSDCVLFYRFADYIRWQKLI 904
Query: 432 F--YENSG------LQNLYDIVRY 447
E + L NL+ +VR+
Sbjct: 905 TGGAETTASSRKIHLANLWHMVRF 928
>gi|412985574|emb|CCO19020.1| predicted protein [Bathycoccus prasinos]
Length = 1352
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 173/373 (46%), Positives = 238/373 (63%), Gaps = 14/373 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
F W N FG YR Q + INA ++G+D LV+M GGGKSLCYQLPA++R+
Sbjct: 466 NFLWTKDCYYALRNNFGAQDYRGLQLQAINATMAGKDTLVLMPTGGGKSLCYQLPAIVRD 525
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VV PL+SLIQDQ+ L L I A +L + +K D + +Y L E ++K+LYVTP
Sbjct: 526 GVTIVVCPLISLIQDQLSNLEQLDIKACLLGAYNAKNDAE-VYNDLYGPEPKIKLLYVTP 584
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
EK+S S + ++ ++ H GRL IDEAHC S WGHDFR DYK L +LK QFPD+P+M
Sbjct: 585 EKLSMSNKLINLMKSLHRKGRLQRFVIDEAHCISSWGHDFRKDYKELRVLKHQFPDIPVM 644
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMV----REKSSVGKVVIDEIAKY 307
ALTATAT +VQ+D++ L + C++F +T NR N+ Y V +EK +V +++ +
Sbjct: 645 ALTATATVRVQDDIVRQLGLANCVRFFTTFNRTNITYEVIPKKKEKQNVEEILSLIHDRG 704
Query: 308 IQESYPNSESGIVYCFSRKECEQVA--------QELRQR-GISADYYHADMDINAREKVH 358
+ E GIVYCFS+ +CE++A Q+ R R GI A YHA +D R+
Sbjct: 705 FVDRRGRVECGIVYCFSKNDCEKMANALCLKNNQDSRFRHGIKALPYHAGLDDKVRKAHQ 764
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
W+ + +I T+AFGMGINKPDVR+V HHS+ KS+E Y+QESGRAGRDG + C+LF
Sbjct: 765 EAWTNDTCNIICATIAFGMGINKPDVRYVFHHSMPKSLEAYHQESGRAGRDGEKALCVLF 824
Query: 419 FRPADVPRQSSMV 431
+ DV + SM+
Sbjct: 825 YSWGDVTKARSML 837
>gi|126208588|ref|YP_001053813.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|303250135|ref|ZP_07336337.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307246031|ref|ZP_07528113.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307250372|ref|ZP_07532320.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252754|ref|ZP_07534645.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255013|ref|ZP_07536831.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307257169|ref|ZP_07538941.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307259449|ref|ZP_07541174.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307261598|ref|ZP_07543266.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126097380|gb|ABN74208.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302651198|gb|EFL81352.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306852966|gb|EFM85189.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306857582|gb|EFM89690.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859786|gb|EFM91808.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861886|gb|EFM93862.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306864331|gb|EFM96242.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306866385|gb|EFM98248.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306868721|gb|EFN00530.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 602
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 170/348 (48%), Positives = 243/348 (69%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+ A DV NVFG ++R QQE+I++VL+GRD LVIM GGGKSLCYQ+PA+ +GI LV
Sbjct: 6 TAAKDVLNNVFGYQSFRHGQQEVIDSVLAGRDCLVIMTTGGGKSLCYQVPALCLDGITLV 65
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKIS 195
+SPL+SL++DQV L GI A L ST + E+++ + KAL G+LK+LY++PEK+
Sbjct: 66 ISPLISLMKDQVDQLLTNGIEAGFLNSTQTFEEQQLVEQKALS---GQLKLLYLSPEKV- 121
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
++ F + C ++SLI++DEAHC SQWGHDFRP+Y LG L+ FP+VP+MALTA
Sbjct: 122 MTQGFFHFISLC----KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTA 177
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA ++D+++ L + ++ + +RPN+ Y V+EK ++++AK+I S
Sbjct: 178 TADPTTRHDILQHLRLTDPHTYLGSFDRPNIRYTVQEKFKP----VEQLAKFI--SKQQG 231
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SRK+ E++ ++L R IS YHA M + RE V + ++ +QV+V T+AF
Sbjct: 232 KSGIVYCNSRKKVEEITEKLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAF 291
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV+H L +S+E+YYQE+GRAGRD LPSE +LF+ PAD
Sbjct: 292 GMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPAD 339
>gi|303253309|ref|ZP_07339458.1| ATP-dependent DNA helicase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307248139|ref|ZP_07530167.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302647991|gb|EFL78198.1| ATP-dependent DNA helicase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855316|gb|EFM87491.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 602
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 171/348 (49%), Positives = 243/348 (69%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+ A DV NVFG ++R QQE+I++VL+GRD LVIM GGGKSLCYQ+PA+ +GI LV
Sbjct: 6 TAAKDVLNNVFGYQSFRHGQQEVIDSVLAGRDCLVIMTTGGGKSLCYQVPALCLDGITLV 65
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKIS 195
VSPL+SL++DQV L GI A L ST + E+++ + KAL G+LK+LY++PEK+
Sbjct: 66 VSPLISLMKDQVDQLLTNGIEAGFLNSTQTFEEQRLVEQKALS---GQLKLLYLSPEKV- 121
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
++ F + C ++SLI++DEAHC SQWGHDFRP+Y LG L+ FP+VP+MALTA
Sbjct: 122 MTQGFFHFISLC----KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTA 177
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA ++D+++ L + ++ + +RPN+ Y V+EK ++++AK+I S
Sbjct: 178 TADPTTRHDILQHLRLTDPHTYLGSFDRPNIRYTVQEKFKP----MEQLAKFI--SKQQG 231
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SRK+ E++ ++L R IS YHA M + RE V + ++ +QV+V T+AF
Sbjct: 232 KSGIVYCNSRKKVEEITEKLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAF 291
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV+H L +S+E+YYQE+GRAGRD LPSE +LF+ PAD
Sbjct: 292 GMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPAD 339
>gi|165976542|ref|YP_001652135.1| ATP-dependent DNA helicase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|165876643|gb|ABY69691.1| ATP-dependent DNA helicase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
Length = 602
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/348 (48%), Positives = 243/348 (69%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+ A DV NVFG ++R QQE+I++VL+GRD LVIM GGGKSLCYQ+PA+ +GI LV
Sbjct: 6 TAAKDVLNNVFGYQSFRHGQQEVIDSVLAGRDCLVIMTTGGGKSLCYQVPALCLDGITLV 65
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKIS 195
+SPL+SL++DQV L GI A L ST + E+++ + KAL G+LK+LY++PEK+
Sbjct: 66 ISPLISLMKDQVDQLLTNGIEAGFLNSTQTFEEQQLVEQKALS---GQLKLLYLSPEKV- 121
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
++ F + C ++SLI++DEAHC SQWGHDFRP+Y LG L+ FP+VP+MALTA
Sbjct: 122 MTQGFFHFISLC----KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTA 177
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA ++D+++ L + ++ + +RPN+ Y V+EK ++++AK+I S
Sbjct: 178 TADPTTRHDILQHLRLTDPHTYLGSFDRPNIRYTVQEKFKP----VEQLAKFI--SKQQG 231
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SRK+ E++ ++L R IS YHA M + RE V + ++ +QV+V T+AF
Sbjct: 232 KSGIVYCNSRKKVEEITEKLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAF 291
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV+H L +S+E+YYQE+GRAGRD LPSE +LF+ PAD
Sbjct: 292 GMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPAD 339
>gi|149057328|gb|EDM08651.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149057329|gb|EDM08652.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 999
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 227/341 (66%), Gaps = 4/341 (1%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 654 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 713
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + IPA LT + + IY L K + +K+LYVTPEK+ S R +S LE
Sbjct: 714 QVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLEN 773
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 774 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQRFPSVPVMALTATANPRVQKDIL 833
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV +D + ++I++ +P +SGI+YC SRK
Sbjct: 834 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVALDCL-EWIRKHHP-YDSGIIYCLSRK 890
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 891 ECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVR 950
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H SL KSVE YYQESGRAGRDG S C+LF+ DV R
Sbjct: 951 FVVHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTR 991
>gi|390357198|ref|XP_781064.3| PREDICTED: uncharacterized protein LOC575579 [Strongylocentrotus
purpuratus]
Length = 1391
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/371 (47%), Positives = 231/371 (62%), Gaps = 14/371 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG+ +R NQ E INA L G D ++M GGGKSL YQLP VL +G+ +V+SPL SLIQ
Sbjct: 776 TFGLHQFRENQLEAINAALLGEDCFILMPTGGGKSLTYQLPGVLTKGVTIVISPLKSLIQ 835
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L +L I L+ + IY+ L + +KMLYVTPEKIS S++ +S +E
Sbjct: 836 DQVQRLVSLEIQETHLSGEMAGAAADGIYRQLCMRDPVVKMLYVTPEKISASQKLLSTME 895
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ G LS IDEAHC SQWGHDFRPDYK L L+ +FP VPMMALTATAT +V+ D+
Sbjct: 896 HLYTRGLLSRFVIDEAHCVSQWGHDFRPDYKRLCKLREKFPGVPMMALTATATPRVKTDI 955
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L ++K S+ +R NL + V +K +I+ I K I + +SGIVYC SR
Sbjct: 956 LHALKMKKPQVLTSSFDRSNLMFRVEKKQP--SKMIENITKLINSQF-KGKSGIVYCLSR 1012
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
ECE+VA +L GI A YHA R V RW + +V+ T+AFGMGI+K DVR
Sbjct: 1013 NECEKVADDLSNAGIKASPYHAGQSDKERSTVQTRWINGQYKVVCATIAFGMGIDKADVR 1072
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH+S+ KS+E YYQE+GRAGRDG + C+L+F DV R M+ E +G
Sbjct: 1073 FVIHYSMPKSIEGYYQEAGRAGRDGGLAHCVLYFSYQDVTRLRRMI--EKNGDNYNATKV 1130
Query: 438 -LQNLYDIVRY 447
+ NLY +V+Y
Sbjct: 1131 HVDNLYGMVQY 1141
>gi|114778864|ref|ZP_01453663.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Mariprofundus ferrooxydans PV-1]
gi|114550899|gb|EAU53464.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Mariprofundus ferrooxydans PV-1]
Length = 724
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 229/623 (36%), Positives = 342/623 (54%), Gaps = 73/623 (11%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
++FG +R Q+EII +L G+D V+M GGGKS+CYQ+PA++REG +VVSPL+SL+
Sbjct: 18 DIFGYDMFRPMQEEIICNLLDGKDAFVLMPTGGGKSICYQIPAIMREGTGIVVSPLISLM 77
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A S+ + K + + E GE L +LYV PE++ SK F++KL
Sbjct: 78 KDQVDALTACGVKAAYYNSSLKAAEAKDVLERFEAGE--LDLLYVAPERLL-SKSFLTKL 134
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
EK +LS+ +IDEAHC SQWGHDFRP+Y LG L+ FPDVPM+ALTATA + + D
Sbjct: 135 EKL----KLSMFAIDEAHCVSQWGHDFRPEYVRLGELREIFPDVPMLALTATADEHTRED 190
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ + L + K +FV++ +RPN+ Y+V EK + + +I +++ + +PN+ SG++YC S
Sbjct: 191 ISDRLQLGKAKRFVASFDRPNIRYLVAEK----RQPLTQILQFL-DGWPNA-SGVIYCLS 244
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK E +A L++ GI A YHA + +RE+V + +++++VIV T+AFGMG++KP+V
Sbjct: 245 RKRVEDLAVNLQRHGIRAAAYHAGIPGRSRERVQDDFLRDRVKVIVATIAFGMGVDKPNV 304
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG------- 437
RFVIHH L KS+E+YYQE+GRAGRDGL SE L+ + DV ++ EN
Sbjct: 305 RFVIHHDLPKSIESYYQETGRAGRDGLESEALMLYGSGDVNLVRRLI--ENVDNIDQRRV 362
Query: 438 -LQNLYDIVRYSQYPLHWNIEKVRLVIF-EKLQQVNLFCMVVLAGHA------------Q 483
+ L +V +S+ +V L F E L + C + L A Q
Sbjct: 363 EVHKLNSMVAFSEALTCRR--RVLLGYFGESLDEPCGNCDICLDPPATYDATEYAEVALQ 420
Query: 484 CIISLLQD-----IQD-----NNQRLTMLQLVDKMKIKLKEIDSDLKREEIEQLVLQLII 533
C+ L D I D NN R+ + K+K DL +E L+ QL+
Sbjct: 421 CVRELKGDYGMGYIVDILRGSNNARIRENK---HDKLKTHGAGDDLNADEWTSLLRQLVH 477
Query: 534 DRVLV----RIGPFSPGKKIIKLEISS----VQKNTADNKKSTKR--SLTSSALEFELDE 583
V R P KK ++ ++ + K ++ KR ++ L +L
Sbjct: 478 HGYFVQDVSRRAAMLPTKKAERIGVAGEPIVLAKYQPGFRRHLKRLGAVRDEPLFKKLVS 537
Query: 584 LRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKI--IGKLKTGKYGSRI 641
LR+E+A + PH V S + ++ RKP++ EE L I +G+ K +G
Sbjct: 538 LREEIAERE-DLPPHVVFSDVSLTEMAQRKPASEEE-----LRGISGVGEHKLEAFGEAF 591
Query: 642 LEVISK----CGNSEQQHDNNAV 660
+E ISK GN Q D +
Sbjct: 592 IEEISKHVEVSGNKTTQTDGKEI 614
>gi|365990115|ref|XP_003671887.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
gi|343770661|emb|CCD26644.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
Length = 1434
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 246/371 (66%), Gaps = 16/371 (4%)
Query: 68 NWSGTFEWDSRADDVRL---NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
N F W +++V+L +F +P +R NQ+E ++A LSG+DV ++M GGGKSLCYQ
Sbjct: 645 NGVTNFPW---SNEVKLKLRQIFKLPGFRPNQEEAVSATLSGKDVFILMPTGGGKSLCYQ 701
Query: 125 LPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKG 180
LPAV++ +G +V+SPL+SL+QDQV L I A M +S + E+++ ++ G
Sbjct: 702 LPAVIKSGKTKGTTIVISPLISLMQDQVQHLLDKNIKASMFSSRGTVEEKRQVFNLFICG 761
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
L ++Y++PE IS S++ +++ H G+L+ + +DEAHC S WGHDFRPDYK L
Sbjct: 762 L--LDVVYISPEMISASEQCKRAIKRLHSDGKLARVVVDEAHCVSNWGHDFRPDYKELKY 819
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
K ++PDVPMMALTATA+++V+ D++ L ++ + + NR NL+Y VR+K+ K
Sbjct: 820 FKREYPDVPMMALTATASEQVRMDIIHNLELKDPVFLKQSFNRTNLYYEVRKKN---KNT 876
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
I EIA I+ + N ++GI+YC S+ CEQ + ++++ GI + YYHA M+ + R K+
Sbjct: 877 IFEIADMIKSKFRN-QTGIIYCHSKNSCEQTSNQMQRAGIKSAYYHAGMEPDDRLKIQKA 935
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W +++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F
Sbjct: 936 WQADEIQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGKYSYCITYFC 995
Query: 421 PADVPRQSSMV 431
DV +M+
Sbjct: 996 FRDVRTMQTMI 1006
>gi|392587356|gb|EIW76690.1| ATP-dependent DNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 898
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/357 (46%), Positives = 235/357 (65%), Gaps = 14/357 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPL 140
N F + ++R NQ E I A L GRDV V+M GGGKSLCYQLPA+ + +G+ +V++PL
Sbjct: 167 NTFKLSSFRTNQLEAITATLDGRDVFVLMPTGGGKSLCYQLPAICKTGKTQGVTIVITPL 226
Query: 141 LSLIQDQVMCLAALGIPAHMLTST-----TSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
L+L+ DQVM L A I A L+S T+++ E + + KG + ++YVTPE++
Sbjct: 227 LALMTDQVMALKAKNIDAVSLSSGAFCGETTRDVESRLRR---KGAPKPSLVYVTPERMQ 283
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
S +S L++ + + +L+ +DEAH WG DFR YK L +L+ ++P+VP+MALTA
Sbjct: 284 NSNSLLSLLDELNDSKQLARFVVDEAHVIQSWGRDFRDAYKELNVLRNKWPNVPIMALTA 343
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D+ L ++ +K + + NRPNL Y VR K + K EIA +I+ +PNS
Sbjct: 344 TADETAIRDITTQLQLKDEVKLMQSFNRPNLSYTVRPKPNNKKQATHEIATFIKSRHPNS 403
Query: 316 ESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
SG+VYC+SR +CE+VA +LR G+SA YYHA +D R + W K +++V T+A
Sbjct: 404 -SGVVYCWSRNDCEEVASQLRDDFGLSAHYYHAGIDTATRPVIQSDWLSGKFKIVVATIA 462
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
FGMGI+KPDVRFVIHHSL K ++ YYQE+GRAGRDGL S+C+LFF D+ +SSMV
Sbjct: 463 FGMGIDKPDVRFVIHHSLPKDMDGYYQETGRAGRDGLQSDCVLFFSNKDLMARSSMV 519
>gi|326479495|gb|EGE03505.1| RecQ family helicase MusN [Trichophyton equinum CBS 127.97]
Length = 1531
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 225/352 (63%), Gaps = 9/352 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W F + +R NQ E IN+ LSG+D V+M GGGKSLCYQLP+++R
Sbjct: 658 WSKDVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKT 717
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
+G+ +V+SPLLSL+QDQV L L + A ++ SK++ I L + + +++LY
Sbjct: 718 KGVTIVISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLY 777
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE ++KS+ S L + H +L+ I IDEAHC SQWGHDFRPDY LG ++ ++P V
Sbjct: 778 VTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYPGV 837
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATAT VQ D++ L ++ C F + NRPNL Y VR+K + D IA I
Sbjct: 838 PVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKD-IADLI 896
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
YP+ + GI+YC SRK CE+VA +L + G+ A +YHA + R V W K
Sbjct: 897 TNDYPD-KCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHN 955
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+K +VRFVIHHS+ +S+E YYQE+GRAGRDG SEC L++
Sbjct: 956 VIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYY 1007
>gi|190150443|ref|YP_001968968.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263787|ref|ZP_07545393.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915574|gb|ACE61826.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306870908|gb|EFN02646.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 602
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/348 (48%), Positives = 242/348 (69%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+ A DV NVFG ++R QQE+I++VL+GRD LVIM GGGKSLCYQ+PA+ +GI LV
Sbjct: 6 TAAKDVLNNVFGYQSFRHGQQEVIDSVLAGRDCLVIMTTGGGKSLCYQVPALCLDGITLV 65
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKIS 195
+SPL+SL++DQV L GI A L ST E+++ + KAL G+LK+LY++PEK+
Sbjct: 66 ISPLISLMKDQVDQLLTNGIEAGFLNSTQIFEEQQLVEQKALS---GQLKLLYLSPEKV- 121
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
++ F + C ++SLI++DEAHC SQWGHDFRP+Y LG L+ FP+VP+MALTA
Sbjct: 122 MTQGFFHFISLC----KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTA 177
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA ++D+++ L + ++ + +RPN+ Y V+EK ++++AK+I S
Sbjct: 178 TADPTTRHDILQHLRLTDPHTYLGSFDRPNIRYTVQEKFKP----VEQLAKFI--SKQQG 231
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SRK+ E++ ++L R IS YHA M + RE V + ++ +QV+V T+AF
Sbjct: 232 KSGIVYCNSRKKVEEITEKLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAF 291
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV+H L +S+E+YYQE+GRAGRD LPSE +LF+ PAD
Sbjct: 292 GMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPAD 339
>gi|255725388|ref|XP_002547623.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
gi|240135514|gb|EER35068.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
Length = 1227
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/458 (39%), Positives = 273/458 (59%), Gaps = 35/458 (7%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG----IALVVSPL 140
N F + +R+NQ E + A L G+DV V+M GGGKSLCYQLPA+++ G +V+SPL
Sbjct: 617 NTFKLKDFRSNQLEAVCATLQGKDVFVLMPTGGGKSLCYQLPALIKSGKTSGTTVVISPL 676
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
+SL+QDQV L + GI A M+++ +K D K EG L ++Y++PEK ++S
Sbjct: 677 ISLMQDQVQHLQSKGIKAGMISAHGAKGDNKHTTNLFR--EGFLDIVYLSPEKANRSGHT 734
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ + + +L+ + IDEAHC S WGHDFRPDY+ L K +FP+VP+MALTATA +K
Sbjct: 735 QKIIARLYKNDQLARVVIDEAHCLSSWGHDFRPDYQGLKFFKEEFPNVPIMALTATANEK 794
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V+ D++ L+++ I + NR NLFY +R K + + EI YI E +PN ++GI+
Sbjct: 795 VREDILHNLNMKDPIFLKQSFNRTNLFYEIRLKQ---RDFLKEIKDYIMEKHPN-QTGII 850
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC S++ CEQ + +L + G+ +YHA M R K+ W NK+QVI T+AFGMGI+
Sbjct: 851 YCHSKQSCEQTSAKLNEYGLRTSFYHAGMSTEDRYKIQTNWQNNKIQVICATIAFGMGID 910
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV-----FYEN 435
KPDVRFVIH L +S+E YYQE+GRAGRDG SEC++++ P D +++ F E+
Sbjct: 911 KPDVRFVIHLFLPRSLEGYYQETGRAGRDGKHSECIMYYSPKDARTLRTLIQGDEQFSED 970
Query: 436 ---SGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNL-----FCMVVLAG------- 480
L+ L +V+Y + + ++V E + C+ G
Sbjct: 971 VKEGHLEKLRQVVQYCENTIDCRRQQVLQYFNESFNPADCNKECDNCLNFNQGEIVERDC 1030
Query: 481 --HAQCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEI 515
+A+ IISL++ IQ + ++T++ D + +K K+I
Sbjct: 1031 TEYARDIISLVKSIQRD--KVTVIHCQDVFRGMKYKKI 1066
>gi|326471382|gb|EGD95391.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1556
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 225/352 (63%), Gaps = 9/352 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W F + +R NQ E IN+ LSG+D V+M GGGKSLCYQLP+++R
Sbjct: 689 WSKDVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKT 748
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
+G+ +V+SPLLSL+QDQV L L + A ++ SK++ I L + + +++LY
Sbjct: 749 KGVTIVISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLY 808
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE ++KS+ S L + H +L+ I IDEAHC SQWGHDFRPDY LG ++ ++P V
Sbjct: 809 VTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYPGV 868
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATAT VQ D++ L ++ C F + NRPNL Y VR+K + D IA I
Sbjct: 869 PVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKD-IADLI 927
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
YP+ + GI+YC SRK CE+VA +L + G+ A +YHA + R V W K
Sbjct: 928 TNDYPD-KCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHN 986
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+K +VRFVIHHS+ +S+E YYQE+GRAGRDG SEC L++
Sbjct: 987 VIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYY 1038
>gi|67605840|ref|XP_666710.1| DEAD/DEAH box helicase [Cryptosporidium hominis TU502]
gi|54657750|gb|EAL36476.1| DEAD/DEAH box helicase [Cryptosporidium hominis]
Length = 990
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/372 (45%), Positives = 237/372 (63%), Gaps = 7/372 (1%)
Query: 67 ENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQL 125
+NW FEW + VFG ++R+NQ++I+NAV+S RDV V+M GGGKSLC+QL
Sbjct: 212 QNWEREDFEWSEDMKRINEQVFGNESFRSNQRQIMNAVVSQRDVFVMMPTGGGKSLCFQL 271
Query: 126 PAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
P +L+ + +V+ PL++L+ DQ+ L LGI L S S ++ I L+KG+
Sbjct: 272 PGLLKYNNPASVTVVIMPLVALMVDQIEQLNILGIKCASLNSNQSADELNHITSLLKKGD 331
Query: 182 GEL--KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG 239
E L+VTPEK+ SK S L++ + RL +IDEAHC QWG DFRPDY L
Sbjct: 332 PETCPAFLFVTPEKLKHSKTLFSLLKQINDESRLLRFAIDEAHCVCQWGFDFRPDYIQLC 391
Query: 240 ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV 299
L+ +FP+VP++ALTATAT + +D+++ L +R F + +RPNL Y VR KS K
Sbjct: 392 KLREEFPNVPIIALTATATHSILSDVIKQLKMRSPTIFSLSFDRPNLKYEVRAKSGSKKK 451
Query: 300 VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHM 359
+++EI + ++ + I+YC SR ECE+V+++L + GISA YYH M + R
Sbjct: 452 MLNEICELLRSPRFCRSTSIIYCLSRNECEEVSKDLNKEGISATYYHGSMKEDKRNLAQR 511
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
RW ++ QV+V T+AFGMGINK DVR VIH S+ KS+E YYQESGRAGRDGL S+C+L++
Sbjct: 512 RWMNDEKQVMVATIAFGMGINKKDVRLVIHLSMPKSLENYYQESGRAGRDGLESKCILYY 571
Query: 420 RPADVPRQSSMV 431
DV R ++
Sbjct: 572 SYKDVSRLQTLA 583
>gi|403369477|gb|EJY84584.1| hypothetical protein OXYTRI_17569 [Oxytricha trifallax]
Length = 1341
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/396 (42%), Positives = 247/396 (62%), Gaps = 13/396 (3%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WS F WD D +FG +R NQ+EIINA S +DVL ++ GGGKSL +QL AV
Sbjct: 245 WSKPFPWDQEVDIANQAIFGNEIFRENQREIINATKSHKDVLALIPTGGGKSLTFQLSAV 304
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTS-TTSKEDEKFIYKALEKGEGEL-KM 186
EG+ LV+ PLLSLI+D + LGIPA L+S S+++E+ +Y+ + + K+
Sbjct: 305 TDEGVTLVIMPLLSLIEDNFSFVEDLGIPACNLSSPNQSQKEERRVYQCYNDIKNVVYKL 364
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
+Y+TPEK+ KS MS ++ + G++ IDE HC S WG DFR DY +L +LK ++P
Sbjct: 365 VYLTPEKLVKSPGLMSAMDHLYAIGKIDRFVIDEVHCVSHWGQDFRKDYLHLDMLKQRYP 424
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP++ LTATAT KV++D+++ L I+ F S+ NR NL Y +R+K K V ++I
Sbjct: 425 KVPLLCLTATATLKVKDDILKRLGIKDAKLFQSSFNRTNLLYEIRDKKQF-KNVTEDIVN 483
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKNK 365
++ + + GI+YC SRKEC+++++ L R I DYYHA++ N R+ + RW KN+
Sbjct: 484 MLRTRFK-GKCGIIYCISRKECQKLSEILKRNYHIKCDYYHAEVSYNQRKDIQERWMKNE 542
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
+Q+I+ T+AFGMGINK DVRFVIH+S+ KS+E Y QE GRAGRD SEC+L+++ D
Sbjct: 543 IQIIIATIAFGMGINKKDVRFVIHYSMPKSLEGYVQECGRAGRDQNKSECILYYQYGDRK 602
Query: 426 RQSSMVFYENSGLQN--------LYDIVRYSQYPLH 453
R + N + LY I+ Y + P +
Sbjct: 603 RNDFFILTNNDNTRTRKNENVHALYSILEYCEEPYY 638
>gi|395747150|ref|XP_002825880.2| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Pongo abelii]
Length = 1398
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 239/385 (62%), Gaps = 25/385 (6%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 652 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 711
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 712 Q--------IPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLVSTLEN 763
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 764 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 823
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 824 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 880
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L++ G++A YHA + +AR++V +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 881 ECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDDCQVICATIAFGMGIDKPDVR 940
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KS+E YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 941 FVIHASLPKSMEGYYQESGRAGRDGEMSHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 1000
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 1001 FNNLYSMVHYCE-----NITECRRI 1020
>gi|407692774|ref|YP_006817563.1| ATP-dependent DNA helicase RecQ [Actinobacillus suis H91-0380]
gi|407388831|gb|AFU19324.1| ATP-dependent DNA helicase RecQ [Actinobacillus suis H91-0380]
Length = 602
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/348 (48%), Positives = 243/348 (69%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+ A DV NVFG ++R QQE+I++VL+GRD LVIM GGGKSLCYQ+PA+ +GI LV
Sbjct: 6 TAAKDVLNNVFGYQSFRHGQQEVIDSVLAGRDCLVIMTTGGGKSLCYQVPALCLDGITLV 65
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKIS 195
+SPL+SL++DQV L GI A L ST + E+++ + KAL G+LK+LY++PEK+
Sbjct: 66 ISPLISLMKDQVDQLLTNGIEAGFLNSTQTFEEQQDVEQKALS---GQLKLLYLSPEKV- 121
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
++ F + C ++SLI++DEAHC SQWGHDFRP+Y LG L+ FP+VP+MALTA
Sbjct: 122 MTQGFFHFISLC----KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRNTFPNVPLMALTA 177
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA ++D+++ L + ++ + +RPN+ Y V+EK ++++AK+I +
Sbjct: 178 TADPTTRHDILQHLRLTDPHTYLGSFDRPNIRYTVQEKFKP----MEQLAKFIGKQ--QG 231
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SRK+ E++ ++L R IS YHA M + RE V + ++ +QV+V T+AF
Sbjct: 232 KSGIVYCNSRKKVEEITEKLATRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAF 291
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV+H L +S+E+YYQE+GRAGRD LPSE +LF+ PAD
Sbjct: 292 GMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPAD 339
>gi|189527306|ref|XP_701357.3| PREDICTED: Bloom syndrome protein homolog, partial [Danio rerio]
Length = 1261
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 176/372 (47%), Positives = 236/372 (63%), Gaps = 12/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D V+M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 674 FGLHQFRFNQLEAINASLLGEDTFVLMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIVD 733
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L L I A L+ + IY L + + +K+LY TPEK+ S R +S L+
Sbjct: 734 QVQKLTTLDICATSLSGDKKDSEAARIYMQLSRKDPAIKLLYATPEKVCASGRMISALQN 793
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L+ + IDEAHC SQWGHDFRPDYK L L+ FP+VP+MALTATAT +VQ D++
Sbjct: 794 LYERGLLARLVIDEAHCVSQWGHDFRPDYKRLHELRRMFPNVPIMALTATATPRVQKDIL 853
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + + F + NR NL Y V K K V +E ++I++ YP +SGIVYC SR
Sbjct: 854 NQLAMTRPQVFTMSFNRNNLKYSVLPKKP--KKVDEECIQWIKKYYPR-DSGIVYCLSRN 910
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
+C+ +A L++ GI+A YHA + + RE V +W +++ QV+ T+AFGMGI+KPDVR
Sbjct: 911 DCDTLADSLQRAGIAALAYHAGLSDSDREYVQNKWINQDGCQVMCATIAFGMGIDKPDVR 970
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ------ 439
+VIH SL KSVE YYQESGRAGRDG S C+LF+ +DV R ++ + G Q
Sbjct: 971 YVIHASLPKSVEGYYQESGRAGRDGEISHCVLFYSYSDVIRIKRLIAMDKDGNQQSKATH 1030
Query: 440 --NLYDIVRYSQ 449
NL+ +V + +
Sbjct: 1031 INNLHSMVHFCE 1042
>gi|440298813|gb|ELP91444.1| DNA helicase hus2, putative [Entamoeba invadens IP1]
Length = 1361
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 233/360 (64%), Gaps = 9/360 (2%)
Query: 68 NWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLP 126
+W T F WD A N FG ++R +Q+ IIN LSG + LV+M GGGKSLCYQL
Sbjct: 610 DWEHTSFTWDEVALKQNHNDFGNDSFRPSQKAIINCALSGHNTLVLMPTGGGKSLCYQLA 669
Query: 127 AVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDE---KFIYKALEKGEGE 183
+ L GI +V+SPL+SLIQDQV L + + ++L + E +F ++ + +
Sbjct: 670 SALMTGITVVISPLVSLIQDQVANLNSTSLENNVLAYYQGSDFEAGKRFFAESKSVCKPK 729
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
LK++++TPE+I + F+ L+ ++ +LI +DEAHC SQWGHDFR Y+ L +L
Sbjct: 730 LKLVFLTPERI-QLDSFLEALDSYYNNRNFALIVVDEAHCVSQWGHDFRESYQKLSVLTQ 788
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
++P VP+M LTATAT++VQND++ + + + F + NR NL Y V+ K+ K VID+
Sbjct: 789 RYPGVPLMMLTATATERVQNDILLSVGVESAVVFTQSFNRKNLRYCVKPKT---KNVIDD 845
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
I K I+ Y N +SGIVYC SRK + V +L RGI A +YHA++ R+K WS
Sbjct: 846 IEKLIKTKYRN-QSGIVYCLSRKNTKDVCDQLVARGIKACFYHAELTPEERQKAQRGWSD 904
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
+ VI T+AFGMGINKPDVRFVIHHSL K++E YYQESGRAGRDG P++C+LF+ D
Sbjct: 905 GEFDVICATIAFGMGINKPDVRFVIHHSLPKTLEGYYQESGRAGRDGEPADCILFYSYRD 964
>gi|123494203|ref|XP_001326459.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121909374|gb|EAY14236.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1081
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 229/356 (64%), Gaps = 5/356 (1%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S+ + V VF +R Q++ I A L+G+DV V+M GGGKSLCYQLP ++ GI L
Sbjct: 365 ESKMNIVNQKVFHHMHFRGKQRDAIGAALNGKDVFVLMPTGGGKSLCYQLPGYMQGGITL 424
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SLIQDQV L L I A + TSKE +++ + L+ L++TPEKI
Sbjct: 425 VVSPLISLIQDQVRSLVELNIEAMSFGADTSKEKYSEMWRKI--SNNSLRFLFLTPEKIM 482
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
L + ++ RL+ IDEAHC SQWGHDFRPDY L L+ +FP+V +MALTA
Sbjct: 483 AGSTLDGFLTQLYNENRLTRFVIDEAHCVSQWGHDFRPDYTQLSNLRVRFPNVRIMALTA 542
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TAT VQ D++E L I+ C F S+ NRPN+FY V +K + + + K+I+E +
Sbjct: 543 TATDAVQKDIVENLGIKGCSLFKSSFNRPNIFYEVMKKETGFR---EAALKWIEEKNYRN 599
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+GIV+C S E EQ+A+ + G+SA +YHA MD N R+ + W+K +++VIV T+AF
Sbjct: 600 STGIVFCMSTAETEQIAKFFQDNGLSAKFYHAKMDKNDRKMTQIEWTKGRVKVIVATLAF 659
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
GMGI+KPDVR+VIH ++ KS+E YYQESGRAGRDG S LL F D + M+
Sbjct: 660 GMGIDKPDVRYVIHMTMPKSLEEYYQESGRAGRDGKQSHALLMFSMGDKSKVHRMI 715
>gi|406866234|gb|EKD19274.1| QDE3-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1765
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/365 (47%), Positives = 236/365 (64%), Gaps = 12/365 (3%)
Query: 66 VENWSGTFE--WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCY 123
VE+ + F W V F + +R +Q + INA LSG+D V+M GGGKSLCY
Sbjct: 872 VEDQNSMFHHPWSKDVKTVLRERFKLKGFRRHQIDAINATLSGQDAFVLMPTGGGKSLCY 931
Query: 124 QLPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL-- 177
QLPAV+ G+ LV+SPLLSL+ DQV L I A L S + E + I+ AL
Sbjct: 932 QLPAVVNSGKTRGVTLVISPLLSLMNDQVQHLLVKKIQAATLNSDSPSEVKSDIWSALRE 991
Query: 178 EKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKN 237
E E +++LY+TPE I+KS ++ L + + G+L+ I IDEAHC SQWGHDFRPDY
Sbjct: 992 ENPEQYIQLLYITPEMINKSPPMIAALTRLYKKGKLARIVIDEAHCVSQWGHDFRPDYVA 1051
Query: 238 LGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVG 297
LG L++ FP VP+MALTATAT V++D+M L ++ C F + NRPNL+Y VR K G
Sbjct: 1052 LGRLRSDFPRVPLMALTATATSNVKDDVMTNLGMKGCPVFTQSFNRPNLYYEVRLKRGKG 1111
Query: 298 KV--VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAR 354
+ ++ EI + ++++Y N ++GI+Y S+K CE +AQ+L + + A +YHA M+ +
Sbjct: 1112 VLAKMVTEIVELVRDTYKN-QTGIIYALSQKGCEDLAQKLANEHNLRAYHYHAGMNREDK 1170
Query: 355 EKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSE 414
V W K+QV+V T+AFGMGI+KPDVRFVIH S+ KS+E YYQE+GRAGRDG S
Sbjct: 1171 ATVLQDWQTGKIQVVVATIAFGMGIDKPDVRFVIHSSVPKSLEGYYQETGRAGRDGKRSG 1230
Query: 415 CLLFF 419
C L+F
Sbjct: 1231 CYLYF 1235
>gi|66475914|ref|XP_627773.1| RecQ bloom helicase (RNA helicase+hrdc) [Cryptosporidium parvum
Iowa II]
gi|32399019|emb|CAD98259.1| DEAD/DEAH box helicase [Cryptosporidium parvum]
gi|46229189|gb|EAK90038.1| RecQ bloom helicase (RNA helicase+hrdc) [Cryptosporidium parvum
Iowa II]
Length = 990
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/365 (45%), Positives = 234/365 (64%), Gaps = 6/365 (1%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
FEW + VFG ++R+NQ++I+NAV+S RDV V+M GGGKSLC+QLP +L+
Sbjct: 219 FEWSEDMKRINEQVFGNESFRSNQRQIMNAVVSQRDVFVMMPTGGGKSLCFQLPGLLKYN 278
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL--KM 186
+ +V+ PL++L+ DQ+ L LGI L S S ++ I L+KG+ E
Sbjct: 279 NPASVTVVIMPLVALMVDQIEQLNILGIKCASLNSNQSADELNHITSLLKKGDPETCPAF 338
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
L+VTPEK+ SK S L++ + RL +IDEAHC QWG DFRPDY L L+ +FP
Sbjct: 339 LFVTPEKLKHSKTLFSLLKQINDESRLLRFAIDEAHCVCQWGFDFRPDYIQLCKLREEFP 398
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
+VP++ALTATAT + +D+++ L +R F + +RPNL Y VR KS K +++EI +
Sbjct: 399 NVPIIALTATATHSILSDVIKQLKMRSPAIFSLSFDRPNLKYEVRAKSGSKKKMLNEICE 458
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
++ + I+YC SR ECE+V+++L + GISA YYH M + R RW ++
Sbjct: 459 LLRSPRFCRSTSIIYCLSRNECEEVSKDLNKEGISATYYHGSMKEDKRNLAQRRWMNDEK 518
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
QV+V T+AFGMGINK DVR VIH S+ KS+E YYQESGRAGRDGL S+C+L++ DV R
Sbjct: 519 QVMVATIAFGMGINKKDVRLVIHLSMPKSLENYYQESGRAGRDGLESKCILYYSYKDVSR 578
Query: 427 QSSMV 431
++
Sbjct: 579 LQTLA 583
>gi|449543657|gb|EMD34632.1| hypothetical protein CERSUDRAFT_116806 [Ceriporiopsis subvermispora
B]
Length = 806
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/486 (39%), Positives = 284/486 (58%), Gaps = 35/486 (7%)
Query: 6 ILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTA 65
I E+ +++ E+ +Q + LV+ +D + ER L+ + + A+ + G A
Sbjct: 56 IAVEIASIDDEIARLQARRYDLVEERDNVVER---LRLVRPSASATPLTSTPNGKGKEKA 112
Query: 66 VE----NWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
E ++ FEW ++FGI ++R Q+ + NA + RDV IM GGGKSL
Sbjct: 113 KEQILVDYRTQFEWSGSLKAKMKSIFGIDSFRLCQEGVCNANMDRRDVFCIMPTGGGKSL 172
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYK---ALE 178
YQLPA+L G LV+SPLL+LI DQV L +G+ +T TS+ ++ K A+
Sbjct: 173 TYQLPALLTPGCTLVISPLLALIDDQVESLREVGVDVVKITGNTSRGEQTDAMKRLTAMS 232
Query: 179 KGEG----ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPD 234
KG G E+K+ YVTPEK+ KSKRF+S ++K AG+L+ IDEAHC S+ GHDFRPD
Sbjct: 233 KGAGSGQNEIKLCYVTPEKVVKSKRFLSLIQKLDEAGKLARFVIDEAHCVSEQGHDFRPD 292
Query: 235 YKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIK-----------FVSTINR 283
Y L L+ P VP +AL+AT V++D++ +LH++ ++ F S + R
Sbjct: 293 YSALSCLRRTCPSVPTLALSATCPPIVRDDVLNILHMKPVVEGKSVGPTGTVFFSSPLYR 352
Query: 284 PNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG---I 340
NL Y V K S VI + YI E + N +GI+YC SRKE E VA++L I
Sbjct: 353 KNLHYTVFPKPSDTGQVIQVMKDYILEHHRN-HTGIIYCLSRKEAETVAEKLEALSDGMI 411
Query: 341 SADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYY 400
YYHAD+ R ++H +W +QV+ T+AFG+GI+K +VRFV+HHS+SKS++ +Y
Sbjct: 412 KTGYYHADLAPERRAQLHRQWRAGTVQVVCATIAFGLGIDKKEVRFVLHHSISKSLDHFY 471
Query: 401 QESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVR 460
QESGRAGRDG ++C+L++RP D+ R SM + + + L +VR++Q +IE+ R
Sbjct: 472 QESGRAGRDGKDADCVLYYRPQDLNRLLSMTWNDRVPAK-LLAMVRFAQ-----DIEECR 525
Query: 461 LVIFEK 466
+ F K
Sbjct: 526 KIQFAK 531
>gi|302653064|ref|XP_003018365.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
gi|291182004|gb|EFE37720.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
Length = 1341
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 224/352 (63%), Gaps = 9/352 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W F + +R NQ E IN+ LSG+D V+M GGGKSLCYQLP+++R
Sbjct: 689 WSRDVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKT 748
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
+G+ +V+SPLLSL+QDQV L L + A ++ SK++ I L + + +++LY
Sbjct: 749 KGVTIVISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLY 808
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE ++KS+ S L + H +L+ I IDEAHC SQWGHDFRPDY LG ++ ++ V
Sbjct: 809 VTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYSGV 868
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATAT VQ D++ L ++ C F + NRPNL Y VR+K + D IA I
Sbjct: 869 PVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKD-IADLI 927
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
YP+ + GI+YC SRK CE+VA +L + G+ A +YHA + R V W K
Sbjct: 928 TNDYPD-KCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHN 986
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+K DVRFVIHHS+ +S+E YYQE+GRAGRDG SEC L++
Sbjct: 987 VIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYY 1038
>gi|449471881|ref|XP_004175079.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein homolog
[Taeniopygia guttata]
Length = 1069
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/401 (46%), Positives = 242/401 (60%), Gaps = 21/401 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 391 FGLHCFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTIVISPLRSLIID 450
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L L I A LT + D IY L K + +K+LYVTPEK+ S R MS LE
Sbjct: 451 QVQKLKTLDIAATYLTGDRTDADASKIYMQLSKKDPVIKLLYVTPEKVCASNRLMSTLEN 510
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK L +L+ +F VPMMALTATA +VQ D++
Sbjct: 511 LYDRKLLARFVIDEAHCVSQWGHDFRQDYKRLNMLRRKFGSVPMMALTATANPRVQKDIL 570
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + K F + NR NL Y V K KV +D + ++I++ +P+ +SGI+YC SR
Sbjct: 571 NQLEMLKPQVFTMSFNRHNLKYDVLPKKPK-KVALDCL-EWIKKYHPH-DSGIIYCLSRH 627
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ A L++ G++A YHA + + R+ V +W ++ QVI T+AFGMGI+KPDVR
Sbjct: 628 ECDTTAAILQKEGLAALAYHAGLTDSNRDLVQQKWVNQEGCQVICATIAFGMGIDKPDVR 687
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KS+E YYQESGRAGRDG S CLLF+ +DV R ++ E G
Sbjct: 688 YVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH 747
Query: 438 LQNLYDIVRYSQYPLHWNIEKVR----LVIFEKLQQVNLFC 474
NLY +V Y + N+ + R L F + FC
Sbjct: 748 FNNLYSMVHYCE-----NVVECRRVQLLAYFGETNFNPTFC 783
>gi|367001388|ref|XP_003685429.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
gi|357523727|emb|CCE62995.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
Length = 1280
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 254/424 (59%), Gaps = 28/424 (6%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+F W S N F + ++R NQ E IN+ L+GRDV V+M GGGKSLCYQLPA+++
Sbjct: 527 SFPWSSEVLFRLKNSFNLNSFRPNQLEAINSTLNGRDVFVLMPTGGGKSLCYQLPAIVKS 586
Query: 132 G----IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
G +V+SPL+SL+ DQV L + I A M++S + K + G L ++
Sbjct: 587 GKTSGTTIVISPLISLMHDQVEHLLNINIKASMISSKSPAAQRKKTFNLF--INGLLDLV 644
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
Y++PE +S S++ +++ + +L+ I +DEAHC S WGHDFRPDYK L + K ++P
Sbjct: 645 YISPEMMSASQQCKRAIKRLYETNKLARIVVDEAHCVSNWGHDFRPDYKELKLFKREYPT 704
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
+P++ALTATA ++VQ D++ L +R + + NR NL Y++R KS K ++EI
Sbjct: 705 IPLIALTATANEQVQLDIINNLGVRNPLLLKQSFNRTNLDYIIRTKS---KNTVNEICSS 761
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
++ + N +SGI+YC S+ CEQVAQ++ + I +YHA M + R K+ W N++Q
Sbjct: 762 LKTDFKN-QSGIIYCNSKISCEQVAQQIASQKIRTAFYHAGMTPSERLKIQKAWQNNQVQ 820
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VI TVAFGMGI+KPDVRFVIH ++ +++E YYQE+GRAGRDGLP++C+ +F DV
Sbjct: 821 VICATVAFGMGIDKPDVRFVIHFTIPRTLEGYYQETGRAGRDGLPAQCITYFSFKDVRSL 880
Query: 428 SSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAGHAQCIIS 487
+M+ + S N E +L EKLQQV +C V Q ++
Sbjct: 881 QTMIQRDKS-----------------LNKEN-KLKHLEKLQQVVSYCDNVTTCRRQQVLK 922
Query: 488 LLQD 491
+
Sbjct: 923 YFNE 926
>gi|336388103|gb|EGO29247.1| hypothetical protein SERLADRAFT_445074 [Serpula lacrymans var.
lacrymans S7.9]
Length = 562
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/406 (43%), Positives = 256/406 (63%), Gaps = 31/406 (7%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VF I +R QQ + NA L GRDV+ +M GGGKSL YQLPA+L G LVVSPL+SL+
Sbjct: 4 VFHIDNFRLCQQGVCNANLDGRDVVCVMPTGGGKSLTYQLPAILTPGCTLVVSPLISLMT 63
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYK-----------ALEKGEGELKMLYVTPEKI 194
DQ++ L GI A MLTS TSK + I +++ ++K+ YVTPEKI
Sbjct: 64 DQILHLREAGIEAVMLTSGTSKGELSSILSRLTAMASSRSHSMDDFAKDIKLCYVTPEKI 123
Query: 195 SKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALT 254
+KSK FMS L+K +L+ I IDEAHC S GHDFRPDYK L L+ FPDVP++AL+
Sbjct: 124 AKSKTFMSLLQKLVDGAKLARIVIDEAHCVSSLGHDFRPDYKELRKLRQYFPDVPILALS 183
Query: 255 ATATQKVQNDLMEMLHIRKCIK-----------FVSTINRPNLFYMVREKSSVGKVVIDE 303
AT KV ND++++L ++ + F + + R NL Y V K S VI+
Sbjct: 184 ATCPPKVLNDILKILQMKHTVDGKAATRQGTVYFSAPLYRKNLHYAVLPKPSSTTQVIEA 243
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG---ISADYYHADMDINAREKVHMR 360
+ +YI E + + ESGIVYC ++K+ E VA+ L Q I A YH+++ +E++H +
Sbjct: 244 MVEYILEKHRD-ESGIVYCSTKKDTESVAENLHQISGGVIKAGVYHSEVPDGKKEQLHRQ 302
Query: 361 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFR 420
W + +QV+ T+AFG+GI+K +VRFV+HH++SKS++ +YQESGRAGRDG S+C+L++R
Sbjct: 303 WRQGDVQVVCATIAFGLGIDKGNVRFVLHHTMSKSLDGFYQESGRAGRDGKASDCILYYR 362
Query: 421 PADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEK 466
P D +QSS+ + LYD++R+ Q ++++ R ++F +
Sbjct: 363 PQDATKQSSITSKDAESQAKLYDVLRFVQ-----DLQECRKILFAR 403
>gi|449304030|gb|EMD00038.1| hypothetical protein BAUCODRAFT_63664, partial [Baudoinia
compniacensis UAMH 10762]
Length = 533
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/352 (47%), Positives = 236/352 (67%), Gaps = 9/352 (2%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F + +R NQ + INA L+G+D ++M GGGKSLCYQLP+++ +G+ +VVSPLLS
Sbjct: 29 FRLKGFRENQLQAINATLAGKDTFILMPTGGGKSLCYQLPSLITTGKTKGVTVVVSPLLS 88
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISKSKRF 200
L++DQV L LGI A ++ ++ ++ I +AL + + + ++ LYVTPE +SK++
Sbjct: 89 LMEDQVQHLLELGIQAFLVNGESTAGEKNQIREALGQRDAQEFIQCLYVTPEMLSKNESM 148
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+S E+ + +L+ I IDEAHC SQWGHDFRPDYK LG ++ +FP+VP+MALTATAT
Sbjct: 149 LSIFERLYQRRQLARIVIDEAHCVSQWGHDFRPDYKLLGNVRQRFPEVPVMALTATATDA 208
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V+ D++ LHI C F + NRPNL+Y VR K S GK ++ IA I+E + +SGI+
Sbjct: 209 VKLDVIHNLHIDSCEIFTRSFNRPNLYYEVRPKESKGK-DLESIATLIKERH-RGQSGII 266
Query: 321 YCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
YC SRK CE +A +L +Q + A +YHA + R K +W VIV T+AFGMGI
Sbjct: 267 YCLSRKNCEDMAADLVKQHKVKAAHYHAGLTSEQRSKAQKQWQSGTYHVIVATIAFGMGI 326
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
+K DVRFVIH+S+ KS+E YYQE+GRAGRDG S C LF+ +D + M+
Sbjct: 327 DKADVRFVIHNSIPKSLEGYYQETGRAGRDGKHSGCYLFYGYSDAGKLRRMI 378
>gi|145344767|ref|XP_001416896.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577122|gb|ABO95189.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 470
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/383 (44%), Positives = 245/383 (63%), Gaps = 20/383 (5%)
Query: 66 VENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
++W T F+W + N F ++R+ Q +NA ++ RD LV+M GGGKSLCYQ
Sbjct: 6 AKDWGHTNFQWSKLCEQTLRNTFNAKSFRSLQLLAVNATMAARDCLVLMPTGGGKSLCYQ 65
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPAV++ GI +V+SPL+SLIQDQ+ L+ +GIPA +L++ +K+ + IY L EL
Sbjct: 66 LPAVVKPGITVVISPLISLIQDQLHHLSEMGIPATVLSA--AKDSDNTIYDDLRSPTPEL 123
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++LYVTPEK+ +S + + L++ + G L+ +DEAHC S WGHDFR DY L LK
Sbjct: 124 RLLYVTPEKVVRSGKLKTALQRLYERGMLNRFVLDEAHCISAWGHDFRKDYTELRGLKHL 183
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FP P+M LTATAT++VQ+D++ L++ KC++F T NR NL Y V K GK +++EI
Sbjct: 184 FPTTPIMCLTATATRRVQDDIVRQLNLPKCLRFFDTFNRTNLTYEVHPKLK-GKQMVNEI 242
Query: 305 AKYI--QESYPNS--ESGIVYCFSRKECEQVAQELRQ------------RGISADYYHAD 348
I ++ N+ + GI+YCFS+ +CE++A EL + + + A YHA
Sbjct: 243 KNLIVSRKLMRNNRVQCGIIYCFSQADCEKIATELNKIDRSVGDRERFPKRLRAVPYHAG 302
Query: 349 MDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGR 408
+ N R+K W ++++ +I TVAFGMGINKP+VRFV HHS+ KS+E Y+QESGRAGR
Sbjct: 303 LADNVRKKHQEMWQRDEVNIICATVAFGMGINKPNVRFVFHHSMPKSLEAYHQESGRAGR 362
Query: 409 DGLPSECLLFFRPADVPRQSSMV 431
DG C+LF+ D + SM+
Sbjct: 363 DGDHGLCILFYSWGDASKARSML 385
>gi|384253210|gb|EIE26685.1| ATP-dependent DNA helicase, partial [Coccomyxa subellipsoidea
C-169]
Length = 513
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/349 (46%), Positives = 233/349 (66%), Gaps = 6/349 (1%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG ++R NQ E INA + G D V+M GGGKSLCYQLPA+L G+ +V+SPL+SLI
Sbjct: 7 DFFGNASFRPNQLEAINATIKGNDCFVLMPTGGGKSLCYQLPALLTNGVTVVISPLVSLI 66
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L GI L+ T ED + I + L++ ++++L+VTPEK+++S M L
Sbjct: 67 QDQVFHLQQAGIACGYLSGTQDYEDSRSIMQRLQQTPPDIRVLFVTPEKVARSDYLMRTL 126
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ H L +++DEAHC SQWGHDFRPDYK L + K ++P VP++ALTATAT +VQ+D
Sbjct: 127 DVLHSRRLLDRVAVDEAHCVSQWGHDFRPDYKGLSVFKRRYPMVPLLALTATATPRVQHD 186
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L ++ C+ F S+ NR NL Y + + K + D IA+ + + GIVYC S
Sbjct: 187 VVQQLSLKHCVVFRSSFNRQNLRYGKFDDAI--KEMEDRIARNFCH-HGRVQCGIVYCLS 243
Query: 325 RKECEQVAQELRQ--RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
R +CE+VA EL++ RG +YHA + RE+V W+ +++Q+IV T+AFGMGINKP
Sbjct: 244 RNDCEKVAAELQEYSRG-CVFHYHAALTQQEREEVQANWTHDRMQIIVATIAFGMGINKP 302
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
DVRFV+H S+ KS+E Y+QE+GR GRDG + C+L++ AD R M+
Sbjct: 303 DVRFVMHFSVPKSLEGYHQETGRGGRDGKVATCILYYSYADAVRMRHML 351
>gi|254567515|ref|XP_002490868.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|238030664|emb|CAY68588.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|328351249|emb|CCA37649.1| bloom syndrome protein [Komagataella pastoris CBS 7435]
Length = 1302
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 231/363 (63%), Gaps = 10/363 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W + F + ++R+NQ E +NA LSG DV V+M GGGKSLCYQLPA+++
Sbjct: 525 YPWTDEVFYILRETFKLESFRSNQLEAVNATLSGEDVFVLMPTGGGKSLCYQLPALVQSG 584
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
G +VVSPL+SL+QDQV L A I A M+ S + ++ + ++ L G+L ++Y
Sbjct: 585 STRGTTVVVSPLISLMQDQVEHLIANKIKAGMINSKGTVQERRQMFDLL--NSGDLDLIY 642
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
++PE IS S + S L++ H G+L+ I +DEAHC S WGHDFRPDYK L K ++PD+
Sbjct: 643 LSPEMISASNQARSSLKRLHRIGKLARIVVDEAHCVSSWGHDFRPDYKTLNYFKKEYPDI 702
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATA + V D++ L + K F + NR NLFY V+ K+ K +DEI I
Sbjct: 703 PVMALTATANEHVVMDIVHNLGLNKPQCFKQSFNRTNLFYKVQVKT---KTHLDEITNMI 759
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
Y N ++GI+YC S+ CEQ + L Q GI +YHA M R V W +K++V
Sbjct: 760 NGQYRN-QTGIIYCHSKNSCEQTSARLIQNGIKCSFYHAGMTTEDRFAVQSAWQSDKIRV 818
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
I T+AFGMGI+KPDVRFVIH ++ +++E YYQE+GRAGRDG S+C++F+ DV
Sbjct: 819 ICATIAFGMGIDKPDVRFVIHLTVPRTLEGYYQETGRAGRDGNHSDCIMFYSYRDVRTLQ 878
Query: 429 SMV 431
+M+
Sbjct: 879 TMI 881
>gi|366993190|ref|XP_003676360.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
gi|342302226|emb|CCC69999.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
Length = 1344
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/361 (45%), Positives = 235/361 (65%), Gaps = 10/361 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W D VF +P +R+NQ E ++A LSG+DV V+M GGGKSLCYQLPAV++
Sbjct: 570 WSDEVDFKLHEVFKLPGFRSNQLEAVDATLSGKDVFVLMPTGGGKSLCYQLPAVVKSGKT 629
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVT 190
+G +V+SPL+SL+QDQV L A I A M +S + E K + G L ++Y++
Sbjct: 630 KGTTIVISPLISLMQDQVEHLLAKDIKACMFSSKGTAEQRKQTFNLF--IHGLLDLIYIS 687
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPM 250
PE IS S++ + K H G+L+ I +DEAHC S WGHDFRPDYK L K ++PDVPM
Sbjct: 688 PEMISASEQCKRAISKLHSDGKLARIVVDEAHCVSNWGHDFRPDYKELKYFKREYPDVPM 747
Query: 251 MALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQE 310
+ALTATA+++V+ D++ L ++ + + NR NL+Y V++K+ K I EI I+
Sbjct: 748 IALTATASEQVRMDIIHNLELKDPVFLKQSFNRTNLYYEVKKKT---KNAIFEIIDSIKT 804
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIV 370
+ N ++GI+YC S+ CEQ + +L+++GI +YHA M+ + R KV W +++QVI
Sbjct: 805 KFRN-QTGIIYCHSKNSCEQTSDKLQRQGIKCAFYHAGMEPDDRLKVQKAWQADEIQVIC 863
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSM 430
TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F DV +M
Sbjct: 864 ATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCITYFSFRDVRTMQTM 923
Query: 431 V 431
+
Sbjct: 924 I 924
>gi|302509478|ref|XP_003016699.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
gi|291180269|gb|EFE36054.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
Length = 1441
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 224/352 (63%), Gaps = 9/352 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W F + +R NQ E IN+ LSG+D V+M GGGKSLCYQLP+++R
Sbjct: 660 WSKDVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKT 719
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
+G+ +V+SPLLSL+QDQV L L + A ++ SK++ I L + + +++LY
Sbjct: 720 KGVTIVISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLY 779
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE ++KS+ S L + H +L+ I IDEAHC SQWGHDFRPDY LG ++ ++ V
Sbjct: 780 VTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYSGV 839
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATAT VQ D++ L ++ C F + NRPNL Y VR+K + D IA I
Sbjct: 840 PVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKD-IADLI 898
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
YP+ + GI+YC SRK CE+VA +L + G+ A +YHA + R V W K
Sbjct: 899 TNDYPD-KCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHN 957
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+K DVRFVIHHS+ +S+E YYQE+GRAGRDG SEC L++
Sbjct: 958 VIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYY 1009
>gi|327303226|ref|XP_003236305.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326461647|gb|EGD87100.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1556
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 223/352 (63%), Gaps = 9/352 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W F + +R NQ E IN+ LSG+D V+M GGGKSLCYQLP+++R
Sbjct: 689 WSKDVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKT 748
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
+G+ +V+SPLLSL+QDQV L L + A ++ SK++ I L + + +++LY
Sbjct: 749 KGVTIVISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLY 808
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE ++KS+ S L + H +L+ I IDEAHC SQWGHDFRPDY LG ++ ++ V
Sbjct: 809 VTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYSGV 868
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATAT VQ D++ L ++ C F + NRPNL Y VR+K + D IA I
Sbjct: 869 PVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKD-IADLI 927
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
YP + GI+YC SRK CE+VA +L + G+ A +YHA + R V W K
Sbjct: 928 TNDYPE-KCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHN 986
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+K DVRFVIHHS+ +S+E YYQE+GRAGRDG SEC L++
Sbjct: 987 VIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYY 1038
>gi|303271731|ref|XP_003055227.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463201|gb|EEH60479.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 581
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/383 (45%), Positives = 232/383 (60%), Gaps = 20/383 (5%)
Query: 66 VENWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
++ WS T+EW S V N F +R Q IN L+ D LV+M GGGKSLCYQ
Sbjct: 45 IKKWSKETYEWSSECRAVLRNTFNAQDFRGMQLATINCTLAKHDCLVLMPTGGGKSLCYQ 104
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTS--KEDEKFIYKALEKGEG 182
LPA++ G+ +V+SPL+SLIQDQ+ L+ + IPA +L S + + + Y L
Sbjct: 105 LPALISSGVTVVISPLVSLIQDQLHHLSEMNIPAAVLGSAENEGQAAQDATYSQLYSNPP 164
Query: 183 ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
LK+LY+TPEK+++S + M LE H G L+ I +DE HC S WGHDFR DYK L ILK
Sbjct: 165 GLKLLYLTPEKVARSPKLMRALETLHGRGMLARIVVDEVHCISSWGHDFRKDYKALRILK 224
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
+F VP++ LTATAT++VQ+D + L + +C +F T NR N+ Y VR+K GK +D
Sbjct: 225 DRFRQVPVIGLTATATKRVQDDCVRQLGLERCARFFQTFNRTNIMYEVRKK---GKKTVD 281
Query: 303 EIAKYIQESYPNSES----GIVYCFSRKECEQVAQELRQ---------RGISADYYHADM 349
EI I E + GIVYCFS+ +C +VA L +G++A YHA M
Sbjct: 282 EIKDIIAEKFTQRNGRVACGIVYCFSQNDCVKVAAALHTKPRADKRFPKGLAAVPYHAGM 341
Query: 350 DINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRD 409
RE +WS ++ +I TVAFGMGINKPDVRFV HHS+ KS+E Y+QESGRAGRD
Sbjct: 342 G-EEREYNQRQWSNGQVSIICATVAFGMGINKPDVRFVFHHSIPKSLEAYHQESGRAGRD 400
Query: 410 GLPSECLLFFRPADVPRQSSMVF 432
G S C L++ D + SM+
Sbjct: 401 GAKSFCYLYYSYGDAQKARSMLM 423
>gi|322514973|ref|ZP_08067985.1| ATP-dependent helicase RecQ [Actinobacillus ureae ATCC 25976]
gi|322119026|gb|EFX91190.1| ATP-dependent helicase RecQ [Actinobacillus ureae ATCC 25976]
Length = 602
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/348 (47%), Positives = 243/348 (69%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+ A DV NVFG ++R QQE+I++VL+GRD LVIM GGGKSLCYQ+PA+ +GI LV
Sbjct: 6 TAAKDVLNNVFGYQSFRHGQQEVIDSVLAGRDCLVIMTTGGGKSLCYQVPALCLDGITLV 65
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKIS 195
+SPL+SL++DQV L G+ A L ST + E+++ + KAL G+LK+LY++PEK+
Sbjct: 66 ISPLISLMKDQVDQLLTNGVEAGFLNSTQTFEEQQDVEQKALS---GQLKLLYLSPEKV- 121
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
++ F + C ++SLI++DEAHC SQWGHDFR +Y LG L+ FP+VP+MALTA
Sbjct: 122 MTQGFFRFISLC----KISLIAVDEAHCVSQWGHDFRSEYTLLGNLRNTFPNVPLMALTA 177
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA ++D+++ L + ++ + +RPN+ Y V+EK ++++AK+I + +
Sbjct: 178 TADPTTRHDILQHLRLTDPHTYLGSFDRPNIRYTVQEKFKP----MEQLAKFISKQH--G 231
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SRK+ E++ ++L R IS YHA M + RE V + ++ +QV+V T+AF
Sbjct: 232 KSGIVYCNSRKKVEEITEKLAARKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAF 291
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV+H L +S+E+YYQE+GRAGRD LPSE +LF+ PAD
Sbjct: 292 GMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPAD 339
>gi|343429696|emb|CBQ73268.1| related to SGS1-DNA helicase [Sporisorium reilianum SRZ2]
Length = 1258
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/361 (47%), Positives = 228/361 (63%), Gaps = 7/361 (1%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL----REGIALVVSPLLS 142
F + +R NQ E IN L GRDV V+M GGGKSLCYQLPA + +G+ +V+SPL+S
Sbjct: 346 FKLRRFRHNQLEAINGTLMGRDVFVLMPTGGGKSLCYQLPACIDTENAKGLTIVISPLIS 405
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
LI DQV L I A +T T+ D++ + + + L++LY+TPE I S +
Sbjct: 406 LINDQVRHLTLKEIAAASITGDTNPADKRLVMDLARETKSSLRLLYLTPEFIRTSPQAQL 465
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L++ + +L+ +DEAHC SQWGHDFRP Y LG L+ Q+P VP+MALTATA +V
Sbjct: 466 LLDELYSRKQLARFVVDEAHCVSQWGHDFRPHYTELGALRKQYPTVPIMALTATANARVV 525
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+ L ++ ++ S+ NRPNL Y VR K +D+IA +I S+ E GIVYC
Sbjct: 526 KDVEACLQMKNVLQLSSSFNRPNLEYQVRSKPR--SKAVDDIASFILASH-KDECGIVYC 582
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SR+ CE VA +L + GISA +YHA + + R V +W N+ +VIV T+AFGMGI+KP
Sbjct: 583 LSRETCETVAADLIKHGISAHHYHARLQKDDRAMVQDKWQSNEFKVIVATIAFGMGIDKP 642
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLY 442
DVRFVIHHSL KS+E YYQE+GRAGRDG S C+L++ DV + MV E Q+
Sbjct: 643 DVRFVIHHSLPKSLEGYYQETGRAGRDGKSSACILYYSYGDVLKIEKMVRGEEDKSQDAI 702
Query: 443 D 443
D
Sbjct: 703 D 703
>gi|443726019|gb|ELU13361.1| hypothetical protein CAPTEDRAFT_91032 [Capitella teleta]
Length = 579
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/370 (45%), Positives = 235/370 (63%), Gaps = 5/370 (1%)
Query: 81 DVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPL 140
D+ +FG+ +R NQ + +NA L G D ++M GGGKSLCYQLPA++ G+ LV+SPL
Sbjct: 3 DIFRTIFGLNEFRHNQLQAVNAALLGHDCFILMPTGGGKSLCYQLPALVTPGVTLVISPL 62
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
SLIQDQV L +L +PA L+S S + L + +K+LY+TPEKI S +
Sbjct: 63 RSLIQDQVQRLCSLDVPATHLSSDVSPAQANQTFMLLHQKIPPVKLLYLTPEKIVASAKL 122
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
S LE + L+ IDEAHC SQWGHDFRPDYK L L+ +FP VPM+A+TATAT +
Sbjct: 123 NSVLENLYRRKMLARFIIDEAHCVSQWGHDFRPDYKKLNGLRERFPGVPMIAVTATATPR 182
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V+ D++ L + F+ + NR NL Y V K K + ++ I + N +SGIV
Sbjct: 183 VRKDILHQLGMNSPKWFMQSFNRVNLKYEVLPKKP--KSLTSDVINMIHSRFSN-QSGIV 239
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGI 379
YC SR+EC+ V+ +L + GI A YHA + R V +W +++ +V+ T+AFGMGI
Sbjct: 240 YCLSRRECDTVSTDLTKAGIQAKAYHAGLTDAQRSSVQQKWLNEDGCKVVCATIAFGMGI 299
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
+KPDVRFV+H+SL KS+E YYQESGRAGRDG+ + C+LF+ +DV R M+ E L
Sbjct: 300 DKPDVRFVVHYSLPKSIEGYYQESGRAGRDGILATCVLFYSYSDVSRLRRMIESE-VHLD 358
Query: 440 NLYDIVRYSQ 449
NL+ ++ Y +
Sbjct: 359 NLFRMINYCE 368
>gi|367019938|ref|XP_003659254.1| hypothetical protein MYCTH_2296042 [Myceliophthora thermophila ATCC
42464]
gi|347006521|gb|AEO54009.1| hypothetical protein MYCTH_2296042 [Myceliophthora thermophila ATCC
42464]
Length = 1843
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 172/366 (46%), Positives = 223/366 (60%), Gaps = 11/366 (3%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
F W + + F + +R NQ E INA L+G+D V+M GGGKSLCYQLPA++
Sbjct: 896 FPWSADVRRALKDRFRMTGFRHNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAMVNSG 955
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKM 186
G+ LVVSPLLSL+ DQV L L I A T S I A + E +++
Sbjct: 956 KTRGVTLVVSPLLSLMNDQVAHLKRLNILAATFNGTISAALRNHILGAFHQPHPEHHIQL 1015
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LYVTPE ++ S F + ++ + +L+ I IDEAHC S WGHDFRPDYK LG + FP
Sbjct: 1016 LYVTPEMLTNSPAFRNGVQLLYRKNKLARIVIDEAHCVSHWGHDFRPDYKALGEFRRGFP 1075
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
VP+MALTATAT+ V D+ L + C F + NRPN++Y V K S I + +
Sbjct: 1076 GVPVMALTATATKNVMADIKHNLDMENCEVFTQSFNRPNIYYQVIYKQSR---FIRGMGE 1132
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQEL-RQRGISADYYHADMDINAREKVHMRWSKNK 365
I E +P + GIVY SRK E AQ L + GI A YYHA MD ++ +V +W +
Sbjct: 1133 LINERFPG-QCGIVYTLSRKSAEGTAQALVSKHGIKARYYHAQMDPESKLEVQEQWQAGE 1191
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
+ V+V T+AFGMGI+KPDVRFVIH SL KS+E YYQE+GRAGRDG PSEC+L+F D+P
Sbjct: 1192 IHVVVATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRAGRDGKPSECILYFAYHDIP 1251
Query: 426 RQSSMV 431
M+
Sbjct: 1252 ALRRMI 1257
>gi|302851980|ref|XP_002957512.1| hypothetical protein VOLCADRAFT_68317 [Volvox carteri f.
nagariensis]
gi|300257154|gb|EFJ41406.1| hypothetical protein VOLCADRAFT_68317 [Volvox carteri f.
nagariensis]
Length = 544
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 166/349 (47%), Positives = 234/349 (67%), Gaps = 15/349 (4%)
Query: 95 NQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE-GIALVVSPLLSLIQDQVMCLAA 153
+Q+ IINA L GRDV V+M GGGKSLCYQLPA++ + G+ +VVSPL+SLIQDQ+ L
Sbjct: 37 SQEAIINATLDGRDVFVLMPTGGGKSLCYQLPALMSDSGVTVVVSPLVSLIQDQIHHLRE 96
Query: 154 LGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRL 213
GI L + + + +++ G ++++L+VTPEK+++S + L+ AGRL
Sbjct: 97 AGIGTAHLGGSQEWSEAAGVMESIRSGASDVRLLFVTPEKVARSDALVRLLDGLVAAGRL 156
Query: 214 SLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRK 273
+DEAHC SQWGHDFRPDY+ L + K+++P VP++ALTATAT +VQ D+ L I
Sbjct: 157 DRCVVDEAHCVSQWGHDFRPDYRELAVFKSKWPRVPLLALTATATPRVQADVRLQLRIPD 216
Query: 274 CIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS-----ESGIVYCFSRKEC 328
C+ F S+ NRPNL Y V KS K +++++ + E + + + GIVYC SR EC
Sbjct: 217 CVVFKSSFNRPNLRYEVVRKS---KAIVEDLKTLLLERFVDRVKKRVQCGIVYCQSRGEC 273
Query: 329 EQVAQELRQ------RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
E+VA+ELR+ R ++A +YHA + + RE+V RWS +++QVIV T+AFGMGINKP
Sbjct: 274 ERVAEELRKVRQPNGRMLNAAHYHAALSHDEREQVQTRWSNDEVQVIVATIAFGMGINKP 333
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
DVRFVIH SL KS+E Y+QE+GR GRDG + CLL++ D + M+
Sbjct: 334 DVRFVIHFSLPKSLEGYHQETGRGGRDGAEAICLLYYNYGDAQKARHML 382
>gi|240949474|ref|ZP_04753814.1| ATP-dependent DNA helicase RecQ [Actinobacillus minor NM305]
gi|240296047|gb|EER46708.1| ATP-dependent DNA helicase RecQ [Actinobacillus minor NM305]
Length = 604
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 165/340 (48%), Positives = 238/340 (70%), Gaps = 15/340 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
N+FG +R QQE+I AVL+G D LVIM GGGKSLCYQ+PA+ EG+ LV+SPL+SL+
Sbjct: 13 NIFGYQQFRQGQQEVIEAVLNGLDTLVIMTTGGGKSLCYQVPALCIEGLTLVISPLISLM 72
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L GI A + ST + E+++ + KA+ G+LK+LY++PEK+ ++ F
Sbjct: 73 KDQVDQLLTNGIEAGYINSTQTFEEQQHVEQKAIS---GQLKLLYLSPEKV-MTQGFFHF 128
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++SLI++DEAHC SQWGHDFRP+Y LG L++ FP+VPMMALTATA ++
Sbjct: 129 ISHC----KISLIAVDEAHCVSQWGHDFRPEYTLLGGLRSTFPNVPMMALTATADPTTRH 184
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D++ L +++ ++ + +RPN+ Y V+EK ++++AK+I + +SGIVYC
Sbjct: 185 DIIHHLRLQEPHTYLGSFDRPNIRYTVQEKFKP----MEQLAKFIAKQ--QGKSGIVYCN 238
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SRK+ E++ ++L RG+S YHA M I RE V + ++ +QV+V T+AFGMGINK +
Sbjct: 239 SRKKVEEITEKLSARGVSVMGYHAGMTIQQRETVQNAFQRDNIQVVVATIAFGMGINKSN 298
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
VRFV H L +S+E+YYQE+GRAGRD LPSE +LF+ PAD
Sbjct: 299 VRFVAHFDLPRSIESYYQETGRAGRDDLPSEAILFYDPAD 338
>gi|251787844|ref|YP_003002565.1| ATP-dependent DNA helicase RecQ [Dickeya zeae Ech1591]
gi|247536465|gb|ACT05086.1| ATP-dependent DNA helicase RecQ [Dickeya zeae Ech1591]
Length = 599
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/339 (48%), Positives = 235/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R QQ IINA +SGRD LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL++
Sbjct: 10 TFGYQQFRPGQQAIINAAVSGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISLMK 69
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A L ST S+E ++ ++ A +GE LK+LY+ PE+++ + F+ +L
Sbjct: 70 DQVDQLQAYGVAAACLNSTQSREQQQAVFSACRRGE--LKLLYIAPERLT-TDGFLDQLA 126
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ A LI+IDEAHC SQWGHDFRP+Y+ LG +K QFP +P++ALTATA + + D+
Sbjct: 127 HWNTA----LIAIDEAHCISQWGHDFRPEYRALGQIKQQFPALPIVALTATADETTRQDI 182
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+L +R + +S+ +RPN+ Y + EK +D++ +IQ +SGIVYC SR
Sbjct: 183 ARLLDLRDPLTNISSFDRPNIRYTLVEKFKP----LDQLWLFIQGQ--RGKSGIVYCNSR 236
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ E + L+ RG+S YHA ++ + R +V + ++ LQV+V TVAFGMGINKP+VR
Sbjct: 237 AKVEDLCARLQNRGLSVGAYHAGLENDRRAQVQEAFLRDDLQVVVATVAFGMGINKPNVR 296
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E LF+ PAD+
Sbjct: 297 FVVHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADM 335
>gi|428213965|ref|YP_007087109.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
gi|428002346|gb|AFY83189.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
Length = 836
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/371 (45%), Positives = 245/371 (66%), Gaps = 15/371 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG ++R Q+EI+ A L RD+L++M GGGKSLC+QLPA+LR+GI +VVSPL++L+
Sbjct: 21 HFFGHDSFRPGQREIVEAALQNRDLLIVMPTGGGKSLCFQLPALLRKGITVVVSPLIALM 80
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L GI L ST S E+ + A+ +GE+K+LYV PE++ S+RF+ +
Sbjct: 81 QDQVESLKNNGIACTFLNSTLSWEESRSRETAIL--QGEIKLLYVAPERLL-SERFLPFM 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ +S +IDEAHC S+WGHDFRP+Y+ + +L+ ++P++PMMALTATAT +V+ D
Sbjct: 138 DLVRAQVGISGFAIDEAHCVSEWGHDFRPEYRQMQLLRQRYPEIPMMALTATATDRVRQD 197
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ + L +R +++ NRPNL+Y VR+K+ K E+ K I+ES SGI+YC S
Sbjct: 198 ITQQLALRDPKIHIASFNRPNLYYEVRQKN---KQSYRELVKLIRES---KGSGIIYCLS 251
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R+ ++VA +L++ GI A YHA M+ R R+ ++ QVIV T+AFGMGINKPDV
Sbjct: 252 RRRVDEVAYKLQREGIDAIPYHAGMNDQERSSNQTRFIRDDAQVIVATIAFGMGINKPDV 311
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR------QSSMVFYENSGL 438
RFV+H+ L +++E YYQESGRAGRDG P+ C +FF D+ Q + V +
Sbjct: 312 RFVVHYDLPRNIEGYYQESGRAGRDGEPANCTMFFGYGDIKTIEYIIDQKTDVDEQRIAR 371
Query: 439 QNLYDIVRYSQ 449
Q L I+ YS+
Sbjct: 372 QQLRQIINYSE 382
>gi|359299526|ref|ZP_09185365.1| ATP-dependent DNA helicase RecQ [Haemophilus [parainfluenzae] CCUG
13788]
gi|402304439|ref|ZP_10823509.1| ATP-dependent DNA helicase RecQ [Haemophilus sputorum HK 2154]
gi|400378027|gb|EJP30892.1| ATP-dependent DNA helicase RecQ [Haemophilus sputorum HK 2154]
Length = 601
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 165/340 (48%), Positives = 235/340 (69%), Gaps = 15/340 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
NVFG +R QQE+I+AVL+GRD LVIM GGGKSLCYQ+PA+ EGI LV+SPL+SL+
Sbjct: 13 NVFGYQQFRQGQQEVIDAVLAGRDCLVIMTTGGGKSLCYQVPALCLEGITLVISPLISLM 72
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L GI A L ST ++E+++ + KAL G+LK+LY++PEK+ ++ F
Sbjct: 73 KDQVDQLLTNGIEAAYLNSTQTQEEQQAVEQKALS---GQLKLLYLSPEKV-MTQGFFRL 128
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++S I++DEAHC SQWGHDFRP+Y LG L+ FP++P+MALTATA +
Sbjct: 129 VSYC----KVSFIAVDEAHCVSQWGHDFRPEYTLLGNLRKTFPNIPLMALTATADPTTRA 184
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D++ L + ++ + +RPN+ Y V+EK ++++AK+I +SGIVYC
Sbjct: 185 DILHHLRLNDPHTYLGSFDRPNIRYTVQEKFKP----MEQLAKFINAQ--KGKSGIVYCN 238
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SRK+ E++ ++L R IS YHA M + RE V + ++ +QV+V T+AFGMGINK +
Sbjct: 239 SRKKVEEITEKLSARHISVMGYHAGMSVQQRETVQNAFQRDNVQVVVATIAFGMGINKSN 298
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
VRFV+H L +S+E+YYQE+GRAGRD LPSE ++F+ PAD
Sbjct: 299 VRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVMFYDPAD 338
>gi|257464903|ref|ZP_05629274.1| ATP-dependent DNA helicase RecQ [Actinobacillus minor 202]
gi|257450563|gb|EEV24606.1| ATP-dependent DNA helicase RecQ [Actinobacillus minor 202]
Length = 604
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 236/340 (69%), Gaps = 15/340 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
N+FG +R QQEII AVL+G D LVIM GGGKSLCYQ+PA+ EG+ LV+SPL+SL+
Sbjct: 13 NIFGYQQFRQGQQEIIEAVLNGLDTLVIMTTGGGKSLCYQVPALCIEGLTLVISPLISLM 72
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L GI A + ST + E+++ + KA+ G+LK+LY++PEK+ ++ F
Sbjct: 73 KDQVDQLLTNGIEAGYINSTQTFEEQQLVEQKAIS---GQLKLLYLSPEKV-MTQGFFHF 128
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++SLI++DEAHC SQWGHDFRP+Y LG L++ FP VPMMALTATA ++
Sbjct: 129 ISHC----KISLIAVDEAHCVSQWGHDFRPEYTLLGGLRSAFPKVPMMALTATADPTTRH 184
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D++ L ++ ++ + +RPN+ Y V+EK ++++AK+I + +SGIVYC
Sbjct: 185 DIIHHLRLQDPHTYLGSFDRPNIRYTVQEKFKP----MEQLAKFIAKQ--QGKSGIVYCN 238
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SRK+ E++ ++L RG+S YHA M I RE V + ++ +QV+V T+AFGMGINK +
Sbjct: 239 SRKKVEEITEKLSARGVSVMGYHAGMTIQQRETVQNAFQRDNIQVVVATIAFGMGINKSN 298
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
VRFV H L +S+E+YYQE+GRAGRD LPSE +LF+ PAD
Sbjct: 299 VRFVAHFDLPRSIESYYQETGRAGRDDLPSEAILFYDPAD 338
>gi|12323338|gb|AAG51646.1|AC018908_12 putative DNA helicase; 33057-26178 [Arabidopsis thaliana]
Length = 1031
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 180/418 (43%), Positives = 256/418 (61%), Gaps = 24/418 (5%)
Query: 20 VQEQIKQLVDR----QDQLYERQS-ELKSLLEAFEASRGSPIQYGGSSSTAVENWSGT-F 73
V+EQ + + D +D L ++ ++ S E E S I + S+ + W+ + F
Sbjct: 343 VKEQGRCVTDNWNMPRDYLVSKERYDISSGSEEREQSVSEVIDVTDTESSNDKKWTSSDF 402
Query: 74 EWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGI 133
W + VFG ++R NQ+EIINA +SG DV LPA+L GI
Sbjct: 403 PWTKNLEVYNKLVFGNHSFRPNQREIINATMSGCDVF--------------LPALLCAGI 448
Query: 134 ALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEK 193
LV+SPL+SLIQDQ+M L I A L++ ++ I + L + + K+LYVTPEK
Sbjct: 449 TLVISPLVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEK 508
Query: 194 ISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMAL 253
++KS+ + LE + L+ IDEAHC SQWGHDFRPDY+ LG+LK +FP++PM+AL
Sbjct: 509 VAKSESLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLAL 568
Query: 254 TATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYP 313
TATAT V+ D+++ L + C+ F + NRPNL+Y V K++ +++I K+I+E++
Sbjct: 569 TATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTN---KCLEDIDKFIRENHF 625
Query: 314 NSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTV 373
+ E GI+YC SR +CE+V + LR G A +YH MD R V +WSK+++ +I TV
Sbjct: 626 D-ECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATV 684
Query: 374 AFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
AFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ D R M+
Sbjct: 685 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMI 742
>gi|363748979|ref|XP_003644707.1| hypothetical protein Ecym_2138 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888340|gb|AET37890.1| Hypothetical protein Ecym_2138 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1394
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 169/384 (44%), Positives = 238/384 (61%), Gaps = 12/384 (3%)
Query: 54 SPIQYGGSSSTAV--ENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLV 111
S I G +S T E + W + N+F +P +R NQ E INA L G+DV V
Sbjct: 591 SAIPMGSTSVTKTVKEISAPVLPWTAEVFHKLQNIFKLPNFRPNQLEAINATLGGQDVFV 650
Query: 112 IMAAGGGKSLCYQLPAVLREG----IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSK 167
+M GGGKSLCYQLPA+++ G +VVSPL+SL+QDQV L A I A M +S +
Sbjct: 651 LMPTGGGKSLCYQLPAIVKSGNTSGTTIVVSPLISLMQDQVEHLLAKNIKASMFSSKGTA 710
Query: 168 EDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQW 227
E + + G L ++Y++PE I S + + ++K + +LS I +DEAHC S W
Sbjct: 711 EQRRQTFNLFINGL--LDLVYISPEMICASVQCKNAIQKLYRDHKLSRIVVDEAHCVSNW 768
Query: 228 GHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLF 287
GHDFRPDYK L K ++P++PMMALTATA+++V+ D++ L +R+ + + NR NL+
Sbjct: 769 GHDFRPDYKELKFFKEEYPNIPMMALTATASEQVRMDIIHNLQLRQPVFLKQSFNRTNLY 828
Query: 288 YMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHA 347
Y V KS K +DEI + I+ + ++GIVYC S+ CEQ A + + G+ YYHA
Sbjct: 829 YQVLRKS---KNSMDEICETIKTKF-RGQTGIVYCHSKNSCEQTAATMVRSGVKCAYYHA 884
Query: 348 DMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAG 407
MD + R +V W NK+QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAG
Sbjct: 885 GMDPDERLQVQQGWQSNKVQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 944
Query: 408 RDGLPSECLLFFRPADVPRQSSMV 431
RDG S C++++ DV SM+
Sbjct: 945 RDGSYSHCIMYYSFRDVRTIQSMI 968
>gi|53133486|emb|CAG32072.1| hypothetical protein RCJMB04_17c23 [Gallus gallus]
Length = 1183
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 176/372 (47%), Positives = 233/372 (62%), Gaps = 12/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 434 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 493
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L L I + LT + D Y L K + +K+LYVTPEK+ S R +S LE
Sbjct: 494 QVQKLKTLDIASTYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALEN 553
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
++ L+ IDEAHC SQWGHDFR DYK L +L+ +F VPMMALTATA +VQ D+
Sbjct: 554 LYNRKLLARFVIDEAHCVSQWGHDFRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQ 613
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + K F + NR NL Y V K KV +D + ++I++ +P+ +SGI+YC SR
Sbjct: 614 NQLEMLKPQVFTMSFNRHNLKYDVLPKKP-KKVAMDCL-EWIKKYHPH-DSGIIYCLSRH 670
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ A L++ G++A YHA + + R+ V +W ++ QVI T+AFGMGI+KPDVR
Sbjct: 671 ECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVR 730
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KS+E YYQESGRAGRDG S CLLF+ +DV R ++ E G
Sbjct: 731 YVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH 790
Query: 438 LQNLYDIVRYSQ 449
NLY +V Y +
Sbjct: 791 FNNLYSMVHYCE 802
>gi|290490724|dbj|BAI79322.1| BLM helicase [Gallus gallus]
Length = 1380
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 177/372 (47%), Positives = 232/372 (62%), Gaps = 12/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 631 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 690
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L L I A LT + D Y L K + +K+LYVTPEK+ S R +S LE
Sbjct: 691 QVQKLKTLDIAATYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALEN 750
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK L +L+ +F VPMMALTATA +VQ D+
Sbjct: 751 LYDRKLLARFVIDEAHCVSQWGHDFRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQ 810
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + K F + NR NL Y V K KV +D + ++I++ +P+ +SGI+YC SR
Sbjct: 811 NQLEMLKPQVFTMSFNRHNLKYDVLPKKPK-KVAMDCL-EWIKKYHPH-DSGIIYCLSRH 867
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ A L++ G++A YHA + + R+ V +W ++ QVI T+AFGMGI+KPDVR
Sbjct: 868 ECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVR 927
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KS+E YYQESGRAGRDG S CLLF+ +DV R ++ E G
Sbjct: 928 YVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH 987
Query: 438 LQNLYDIVRYSQ 449
NLY +V Y +
Sbjct: 988 FNNLYSMVHYCE 999
>gi|367004206|ref|XP_003686836.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
gi|357525138|emb|CCE64402.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
Length = 1355
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 235/368 (63%), Gaps = 10/368 (2%)
Query: 68 NWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
N +G W + VF +P +R NQ++ +NA LSG+DV V+M GGGKSLCYQLPA
Sbjct: 577 NGTGKHLWTNEVKSKLQEVFKLPGFRPNQEDAVNATLSGKDVFVLMPTGGGKSLCYQLPA 636
Query: 128 VLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 183
+++ +G +VVSPL+SL+QDQV L A I A M +S + + + + G
Sbjct: 637 IIKSGNTKGTTIVVSPLISLMQDQVDHLLAKNIKASMFSSKGTADQRRQTFNLF--IHGL 694
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
L ++Y++PE IS S++ + K H G L+ I +DEAHC S WGHDFRPDYK L K
Sbjct: 695 LDLIYISPEMISASEQCKRAIAKLHEDGNLARIVVDEAHCVSNWGHDFRPDYKELKFFKG 754
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
++P++PMMALTATA+++V+ D++ L ++ + + NR NL+Y + +KS K I E
Sbjct: 755 EYPNIPMMALTATASEQVRMDIIHNLKLKDPVFLKQSFNRTNLYYEIIKKS---KNTIFE 811
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
++ I+ + N ++GI+YC S+ CEQ + ++ + GI YYHA M+ + R KV W
Sbjct: 812 MSDDIKRRFRN-QTGIIYCHSKNSCEQTSAQMERAGIKCAYYHAGMEPDDRLKVQKAWQA 870
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
+++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ ++ D
Sbjct: 871 DEVQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCITYYSFKD 930
Query: 424 VPRQSSMV 431
V +M+
Sbjct: 931 VRTIQTMI 938
>gi|17366086|sp|Q9I920.1|BLM_CHICK RecName: Full=Bloom syndrome protein homolog; AltName: Full=RecQ
helicase homolog
gi|8567899|dbj|BAA96742.1| Gd BLM [Gallus gallus]
Length = 1142
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/372 (47%), Positives = 231/372 (62%), Gaps = 12/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 393 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 452
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L L I A LT + D Y L K + +K+LYVTPEK+ S R +S LE
Sbjct: 453 QVQKLKTLDIAATYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALEN 512
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK L +L+ +F VPMMALTATA +VQ D+
Sbjct: 513 LYDRKLLARFVIDEAHCVSQWGHDFRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQ 572
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + K F + NR NL Y V K KV +D + ++I++ +P+ +SGI+YC SR
Sbjct: 573 NQLEMLKPQVFTMSFNRHNLKYDVLPKKP-KKVAMDCL-EWIKKYHPH-DSGIIYCLSRH 629
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ A L++ G++A YHA + + R+ V +W ++ QVI T+AFGMGI+KPDVR
Sbjct: 630 ECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVR 689
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KSVE YY ESGRAGRDG S CLLF+ +DV R ++ E G
Sbjct: 690 YVIHASLPKSVEGYYHESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH 749
Query: 438 LQNLYDIVRYSQ 449
NLY +V Y +
Sbjct: 750 FNNLYSMVHYCE 761
>gi|46143327|ref|ZP_00135472.2| COG0514: Superfamily II DNA helicase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 604
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/338 (48%), Positives = 237/338 (70%), Gaps = 15/338 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R QQE+I++VL+GRD LVIM GGGKSLCYQ+PA+ +GI LV+SPL+SL++D
Sbjct: 18 FGYQSFRHGQQEVIDSVLAGRDCLVIMTTGGGKSLCYQVPALCLDGITLVISPLISLMKD 77
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
QV L GI A L ST + E+++ + KAL G+LK+LY++PEK+ ++ F +
Sbjct: 78 QVDQLLTNGIEAGFLNSTQTFEEQQLVEQKALS---GQLKLLYLSPEKV-MTQGFFHFIS 133
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
C ++SLI++DEAHC SQWGHDFRP+Y LG L+ FP+VP+MALTATA ++D+
Sbjct: 134 LC----KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTATADPTTRHDI 189
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
++ L + ++ + +RPN+ Y V+EK ++++AK+I S +SGIVYC SR
Sbjct: 190 LQHLRLTDPHTYLGSFDRPNIRYTVQEKFKP----VEQLAKFI--SKQQGKSGIVYCNSR 243
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E++ ++L R IS YHA M + RE V + ++ +QV+V T+AFGMGINK +VR
Sbjct: 244 KKVEEITEKLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVR 303
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
FV+H L +S+E+YYQE+GRAGRD LPSE +LF+ PAD
Sbjct: 304 FVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPAD 341
>gi|410075411|ref|XP_003955288.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
gi|372461870|emb|CCF56153.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
Length = 1318
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 235/363 (64%), Gaps = 10/363 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W ++ VF +P +R NQ+E +NA L G+DV V+M GGGKSLCYQLPA+++
Sbjct: 535 YPWSEEVEERLHGVFKLPGFRPNQEEAVNATLDGKDVFVLMPTGGGKSLCYQLPAIVKSG 594
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
G +V+SPL+SL+QDQV L A I A M +S + E+ + + G L ++Y
Sbjct: 595 RTRGTTIVISPLISLMQDQVEHLLAKNIKASMFSSKGTSEERRQTFNLF--IHGLLDVVY 652
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
++PE IS S++ ++K + G L+ + +DEAHC S WGHDFRPDYK L + K ++P +
Sbjct: 653 ISPEMISASQQCKRAIDKLYTDGNLARVVVDEAHCVSNWGHDFRPDYKELKMFKVEYPTI 712
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PMMALTATA+++V D++ L ++ + + NR NL+Y V++K K ++ I I
Sbjct: 713 PMMALTATASKQVIMDIIHNLGLKNEVFLKQSFNRTNLYYEVKKKD---KDTMNNICDMI 769
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ + N ++GI+YC S+ CEQV+ +L+++ I YYHA M+ R V W ++++QV
Sbjct: 770 KNRFRN-QTGIIYCHSKNSCEQVSSQLQRKNIRCAYYHAGMEPEERSAVQKAWQEDEIQV 828
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
I TVAFGMGI+KPDVRFVIH+++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 829 ICATVAFGMGIDKPDVRFVIHYTVPRTLEGYYQETGRAGRDGNYSYCVTYFHFKDIRTMQ 888
Query: 429 SMV 431
+M+
Sbjct: 889 TMI 891
>gi|347800747|ref|NP_001007088.2| Bloom syndrome protein homolog [Gallus gallus]
Length = 1380
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/372 (47%), Positives = 233/372 (62%), Gaps = 12/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 631 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 690
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L L I + LT + D Y L K + +K+LYVTPEK+ S R +S LE
Sbjct: 691 QVQKLKTLDIASTYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALEN 750
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
++ L+ IDEAHC SQWGHDFR DYK L +L+ +F VPMMALTATA +VQ D+
Sbjct: 751 LYNRKLLARFVIDEAHCVSQWGHDFRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQ 810
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L + K F + NR NL Y V K KV +D + ++I++ +P+ +SGI+YC SR
Sbjct: 811 NQLEMLKPQVFTMSFNRHNLKYDVLPKKPK-KVAMDCL-EWIKKYHPH-DSGIIYCLSRH 867
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ A L++ G++A YHA + + R+ V +W ++ QVI T+AFGMGI+KPDVR
Sbjct: 868 ECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVR 927
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
+VIH SL KS+E YYQESGRAGRDG S CLLF+ +DV R ++ E G
Sbjct: 928 YVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH 987
Query: 438 LQNLYDIVRYSQ 449
NLY +V Y +
Sbjct: 988 FNNLYSMVHYCE 999
>gi|156844324|ref|XP_001645225.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156115884|gb|EDO17367.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 1280
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/351 (45%), Positives = 231/351 (65%), Gaps = 10/351 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIA----LVVSPL 140
N F I ++R NQ E INA LSGRDV V+M GGGKSLCYQLPA+++ G +V+SPL
Sbjct: 526 NTFRIQSFRQNQLEAINATLSGRDVFVLMPTGGGKSLCYQLPAIVKSGTTSGTTIVISPL 585
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
+SL+QDQV L I A M++S ++ K + G L ++Y++PE IS S++
Sbjct: 586 ISLMQDQVEHLLDKNIKACMISSKSTAAQRKETFNLF--VNGLLDLVYISPEMISASQQC 643
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ K + + +LS I +DEAHC S WGHDFRPDYK+L K ++P++P++ALTATA+++
Sbjct: 644 KRAINKLYSSSKLSRIVVDEAHCVSNWGHDFRPDYKSLSFFKREYPNIPLVALTATASEQ 703
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V+ D++ L + + + NR NL Y V+ KS K I+EI ++ + N +SGI+
Sbjct: 704 VRMDIIANLEMHNPLTLKQSFNRTNLNYQVKAKS---KETINEICTLLKGRFKN-QSGII 759
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC S+ CEQVA+++ Q I +YHA +D R ++ W KN++QVI TVAFGMGI+
Sbjct: 760 YCHSKNSCEQVAEQISQHKIRCAFYHAGIDPAERLQIQKAWQKNQIQVICATVAFGMGID 819
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
KPDVR+V H+++ +++E YYQE+GRAGRDGL S C+ +F DV +M+
Sbjct: 820 KPDVRYVFHYTVPRTLEGYYQETGRAGRDGLYSYCICYFSFKDVRTLQTMI 870
>gi|354683879|gb|AER35068.1| ATP-dependent DNA helicase [Dictyostelium lacteum]
Length = 748
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/366 (42%), Positives = 237/366 (64%), Gaps = 4/366 (1%)
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
S S+ E++S FEWD + VFG ++R Q+E INA+LS +D + + GGGKS
Sbjct: 256 SISSGNESYSKQFEWDRVVSECNKMVFGNDSFRRLQKEAINAILSNKDTFISLPTGGGKS 315
Query: 121 LCYQLPAVLRE--GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE 178
LC+QLPA++ + G+ +V+SPLL+L+QDQ+ L +LG+P L S S + K +++ L
Sbjct: 316 LCFQLPALIGKDAGVNIVISPLLALMQDQLSKLKSLGVPVETLNSQLSISERKRVFQELN 375
Query: 179 KGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL 238
+K+LYVTPE+ S S F L H G+L + +DEAH S+WGHDFRP Y+ L
Sbjct: 376 NINCSIKLLYVTPERFSGSD-FQEILVNIHDRGQLKRLIVDEAHSISEWGHDFRPSYRRL 434
Query: 239 GILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGK 298
+ + QFP +P++ALTATAT +V+ D+ L +R + S+ R NL Y VR KS +
Sbjct: 435 SLFRKQFPGLPIVALTATATDRVEKDIKSSLQMRSIVNIRSSFMRSNLIYQVRLKSQDSQ 494
Query: 299 VVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVH 358
V+ +I YI + YP ESGI+YC + K+CE +++ L RG+ +YHA + + R ++
Sbjct: 495 SVLTDIYAYISKKYP-KESGIIYCATTKDCEIISEYLSSRGLDTCFYHASLKPSQRIQLQ 553
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
W++ + +V+ T+AFGMGI+K + RFVIHH++ +S+E YYQ++GRAGRDG S+C+L+
Sbjct: 554 NDWTEGRFKVVCTTIAFGMGIDKSNTRFVIHHTIPQSIEAYYQQTGRAGRDGQTSDCILY 613
Query: 419 FRPADV 424
+ D+
Sbjct: 614 YSKFDL 619
>gi|307132960|ref|YP_003884976.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
gi|306530489|gb|ADN00420.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
Length = 614
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/339 (47%), Positives = 234/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R QQ IINA +SGRD LVIM GGGKSLCYQ+PA++ EG+ LVVSPL+SL++
Sbjct: 25 TFGYQQFRPGQQAIINAAVSGRDCLVIMPTGGGKSLCYQIPALVLEGLTLVVSPLISLMK 84
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A L ST ++E ++ ++ A +GE LK+LY+ PE+++ + F+ +L
Sbjct: 85 DQVDQLQAYGVAAACLNSTQTREQQQAVFSACRRGE--LKLLYIAPERLT-TDGFLEQLT 141
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +LI+IDEAHC SQWGHDFRP+Y+ LG +K Q P +P++ALTATA + + D+
Sbjct: 142 HWN----TTLIAIDEAHCISQWGHDFRPEYRALGQIKQQLPALPIVALTATADETTRQDI 197
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+L +R + +S+ +RPN+ Y + EK +D++ ++Q +SGIVYC SR
Sbjct: 198 ARLLDLRDPLINISSFDRPNIRYTLVEKFKP----LDQLWLFVQGQ--RGKSGIVYCNSR 251
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ E + L+ RG+S YHA +D + R +V + ++ LQV+V TVAFGMGINKP+VR
Sbjct: 252 AKVEDLCARLQNRGLSVGAYHAGLDNDRRSQVQEAFLRDDLQVVVATVAFGMGINKPNVR 311
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E LF+ PAD+
Sbjct: 312 FVVHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADM 350
>gi|258625868|ref|ZP_05720743.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM603]
gi|258581832|gb|EEW06706.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM603]
Length = 620
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 237/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I+A L GRD LVIM GGGKSLCYQ+PA++REG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIDAALQGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP++P+MALTATA ++D+
Sbjct: 149 NL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|262404934|ref|ZP_06081486.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC586]
gi|262348773|gb|EEY97914.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC586]
Length = 620
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 237/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++REG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLTREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP++P+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|328866871|gb|EGG15254.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
fasciculatum]
Length = 834
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/386 (44%), Positives = 235/386 (60%), Gaps = 12/386 (3%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
+S F WD + VFG+ RA Q++ INA+L RD V + GGGKSLC+QLPA+
Sbjct: 368 FSQEFPWDDLVNSCAKTVFGVGELRALQKDAINAILYRRDTFVSLPTGGGKSLCFQLPAL 427
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
+ G+ +VVSPLL+L+ DQV L GIPA +L S S + + LE +G +K+LY
Sbjct: 428 IDAGLTVVVSPLLALMNDQVTKLRQRGIPAAVLNSGISVSERTRTMEELENPQGSIKLLY 487
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE++ S+ F ++ + H+ GRL + IDEAHC S+WGHDFR DY+ L + FP V
Sbjct: 488 VTPERLV-SEDFAKRMARWHYQGRLRRLVIDEAHCISEWGHDFRSDYRKLSSFRKTFPHV 546
Query: 249 PMMALTATATQKVQNDLMEMLHIRK--CIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
P++ALTATAT V++D+ L I + + T R NL Y VR+K + V +I
Sbjct: 547 PIVALTATATDYVEHDIKNQLGISRDDVVNVRGTFQRNNLRYAVRDKPASPIGVAMDIES 606
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
+I+ YP S SGIVYC + ECE +A LR G+SA +Y+A + R ++ W K K+
Sbjct: 607 FIKARYPTS-SGIVYCATSVECENLASHLRDVGLSAHHYYASLSTPTRLEIQDNWIKGKI 665
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD--- 423
+VI T AFGMGI+KPD RFVIHHS+ +S+E+YYQ +GRAGRDG S+ +L+F D
Sbjct: 666 KVICTTTAFGMGIDKPDTRFVIHHSMPQSIESYYQHTGRAGRDGQLSDSILYFSDIDKKR 725
Query: 424 -----VPRQSSMVFYENSGLQNLYDI 444
P S+ YEN + DI
Sbjct: 726 MEKLMKPTTSTQDQYENISNDKVGDI 751
>gi|262172709|ref|ZP_06040387.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus MB-451]
gi|261893785|gb|EEY39771.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus MB-451]
Length = 620
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I+A L GRD LVIM GGGKSLCYQ+PA++REG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIDAALQGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLTREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP++P+MALTATA ++D+
Sbjct: 149 NL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNDPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|255719436|ref|XP_002555998.1| KLTH0H02706p [Lachancea thermotolerans]
gi|238941964|emb|CAR30136.1| KLTH0H02706p [Lachancea thermotolerans CBS 6340]
Length = 1403
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 267/438 (60%), Gaps = 14/438 (3%)
Query: 2 ETEEILQE--LENVEAEVRLVQEQIKQLVD-RQDQLYERQSELKSLL-EAFEASRGSPIQ 57
E E + Q+ + ++ +++++ EQ + + R + + ++SLL E E +G +
Sbjct: 543 ERENLTQKSGIRKLDDDLKIISEQKLDVSNARPSNIKQEVINVESLLDEGVENFQGGALS 602
Query: 58 YGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGG 117
+ N FEW + NVF +P +R NQ E INA L G+DV V+M GG
Sbjct: 603 LSSIGAAGHGNTGPQFEWTAEVYHRLHNVFKLPGFRPNQLEAINASLEGKDVFVLMPTGG 662
Query: 118 GKSLCYQLPAVLREG----IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI 173
GKSLCYQLPAV+R G +V+SPL+SL+QDQV L A I A M +S + + ++
Sbjct: 663 GKSLCYQLPAVVRSGKTSGTTVVISPLISLMQDQVEHLLAKNIKACMFSSKGTADQKRQT 722
Query: 174 YKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRP 233
+ G L ++Y++PE IS S++ + K + +L+ I +DEAHC S WGHDFRP
Sbjct: 723 FNLFINGL--LDLIYISPEMISASEQCKKAIGKLYRDKKLARIVVDEAHCVSNWGHDFRP 780
Query: 234 DYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREK 293
DYK L K ++PD+PM+ALTATA+++V+ D++ L + + + NR NL+Y V +K
Sbjct: 781 DYKELKYFKREYPDIPMIALTATASEQVRLDIVHNLQLNNPVFLKQSFNRTNLYYEVLKK 840
Query: 294 SSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINA 353
S K V+ +I ++ + N ++GI+YC S+ CEQ A L++ GI++ YYHA M+ +
Sbjct: 841 S---KNVVFDICNAVKTRFKN-QTGIIYCHSKNSCEQTASLLQRNGINSAYYHAGMEPDE 896
Query: 354 REKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPS 413
R +V W N++++I TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S
Sbjct: 897 RLEVQQAWQANRIRIICATVAFGMGIDKPDVRFVYHLTIPRTLEGYYQETGRAGRDGKFS 956
Query: 414 ECLLFFRPADVPRQSSMV 431
C++++ DV +M+
Sbjct: 957 FCIMYYTFRDVRTMQTMI 974
>gi|223940604|ref|ZP_03632448.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
gi|223890722|gb|EEF57239.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
Length = 728
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/345 (47%), Positives = 233/345 (67%), Gaps = 13/345 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R Q+EII L+G+DV ++ GGGKSLC+QLPA++R G+ +V+SPL++L++D
Sbjct: 20 FGFSSFRPLQEEIILDTLAGKDVFALLPTGGGKSLCFQLPALVRPGLTVVISPLIALMKD 79
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L A G PA L S+ + + L KGE ++LYV PE++ S F+ L +
Sbjct: 80 QVDALTASGAPATFLNSSLEAGESTPRLRGLHKGE--FRLLYVAPERLMLSG-FLEDLRR 136
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ ++L +IDEAHC S+WGHDFRP+Y+ + L+ FP+VP MALTATAT++V+ D++
Sbjct: 137 WN----VNLFAIDEAHCVSEWGHDFRPEYRAISKLRELFPEVPFMALTATATERVREDII 192
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L +R+ FV++ NRPNL Y V KS ++ +I+ + P ESGIVYC SRK
Sbjct: 193 RALSLREPQIFVASFNRPNLTYRVHAKSGA----YEQTLSFIR-ARPR-ESGIVYCHSRK 246
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
E VAQ+L + G+SA YHA + R + + +++++V+ T+AFGMGINKP+VRF
Sbjct: 247 TAESVAQKLNEDGVSARPYHAGLPGEERSRNQELFLRDEVRVVCATIAFGMGINKPNVRF 306
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
VIH+ L K+VE YYQE+GRAGRDGLPSECLL F P DV +Q+ +
Sbjct: 307 VIHYDLPKNVEGYYQETGRAGRDGLPSECLLLFSPGDVVKQTGFI 351
>gi|238750693|ref|ZP_04612192.1| ATP-dependent DNA helicase recQ [Yersinia rohdei ATCC 43380]
gi|238711083|gb|EEQ03302.1| ATP-dependent DNA helicase recQ [Yersinia rohdei ATCC 43380]
Length = 610
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 236/346 (68%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQEIINA LSG+D LV+M GGGKSLCYQ+PA++ EG+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTEGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L H R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FPD+P++ALTATA
Sbjct: 131 -FLDQL----HQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L++ + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 EATRGDIVRLLNLENPLIQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D R V + ++ LQV+V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAHVQEAFQRDDLQVVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADM 345
>gi|238763624|ref|ZP_04624584.1| ATP-dependent DNA helicase recQ [Yersinia kristensenii ATCC 33638]
gi|238698102|gb|EEP90859.1| ATP-dependent DNA helicase recQ [Yersinia kristensenii ATCC 33638]
Length = 610
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 237/346 (68%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQEIINA LSG+D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L H R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FPD+P++ALTATA
Sbjct: 131 -FLDQL----HQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L++ + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 EATRGDIVRLLNLENPLIQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADM 345
>gi|387770728|ref|ZP_10126905.1| ATP-dependent DNA helicase RecQ [Pasteurella bettyae CCUG 2042]
gi|386903739|gb|EIJ68543.1| ATP-dependent DNA helicase RecQ [Pasteurella bettyae CCUG 2042]
Length = 630
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/362 (46%), Positives = 242/362 (66%), Gaps = 15/362 (4%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A +V +VFG ++R Q+E+I A L+GRD LV+MA G GKSLCYQ+PA+ EG+ LV+S
Sbjct: 22 ALEVLRSVFGYQSFRKGQEEVIEAALTGRDSLVVMATGNGKSLCYQIPALCFEGLTLVIS 81
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY-KALEKGEGELKMLYVTPEKISKS 197
PL+SL++DQV L GI A L ST S E ++ + KA+ GELK+LY++PEK+ +
Sbjct: 82 PLISLMKDQVDQLLTNGISADFLNSTQSFEQQQKVQNKAIS---GELKLLYLSPEKV-MT 137
Query: 198 KRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATA 257
F + C+ +S I+IDEAHC SQWGHDFRP+Y LG LK+ FP+ P+MALTATA
Sbjct: 138 NSFFQFISLCN----VSFIAIDEAHCISQWGHDFRPEYTQLGGLKSCFPNAPVMALTATA 193
Query: 258 TQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSES 317
+ + D+++ LH+ + +V + +RPN+ Y + EK +D++ ++ +S
Sbjct: 194 DRTTRQDILQNLHLNEPHLYVGSFDRPNIRYTLVEKFKP----MDQLCNFVVAQ--KGKS 247
Query: 318 GIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGM 377
GIVYC SR + E++A+ L+++G+SA YHA M+ R+ V + ++ +QV+V T+AFGM
Sbjct: 248 GIVYCNSRSKVERIAEALKKKGVSAAGYHAGMEPQQRDAVQQAFQRDNIQVVVATIAFGM 307
Query: 378 GINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG 437
GINK +VRFV H LS+S+E YYQE+GRAGRD LP+E +LF+ PAD M+ E G
Sbjct: 308 GINKSNVRFVAHFDLSRSIEAYYQETGRAGRDDLPAEAVLFYEPADYAWLHKMLLEEPEG 367
Query: 438 LQ 439
Q
Sbjct: 368 PQ 369
>gi|433323990|ref|ZP_20401319.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
gi|433327299|ref|ZP_20403746.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
gi|432344992|gb|ELL39536.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
gi|432347541|gb|ELL42000.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
Length = 609
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 161/349 (46%), Positives = 235/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+SRA V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESRAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|296813367|ref|XP_002847021.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
gi|238842277|gb|EEQ31939.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
Length = 1550
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 163/352 (46%), Positives = 224/352 (63%), Gaps = 9/352 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W +F + +R NQ E IN+ LSGRD V+M GGGKSLCYQLP++++
Sbjct: 685 WSKDVKSAMREIFHLRGFRPNQLESINSTLSGRDTFVLMPTGGGKSLCYQLPSIIKTGQT 744
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--KGEGELKMLY 188
+G+ +V+SPLLSL+QDQV L L + A ++ SK++ I L + + +++LY
Sbjct: 745 KGVTIVISPLLSLMQDQVAHLQKLHVKAFLINGDVSKDERTSIMSNLRSLRADSHIQLLY 804
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
VTPE ++KS+ S L + H +L+ I IDEAHC SQWGHDFRPDY LG ++ ++ V
Sbjct: 805 VTPEMLAKSRAMESALLQLHSNKKLARIVIDEAHCVSQWGHDFRPDYTALGKMRERYTGV 864
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATAT VQ D++ LH++ C F + NRPNL Y VR+K + D IA I
Sbjct: 865 PVMALTATATPNVQVDVIHNLHMKGCDVFTQSFNRPNLTYEVRKKGRAQDALKD-IADLI 923
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQ 367
Y + + GI+YC SRK CE+VA +L + G+ +YHA + R V W +
Sbjct: 924 TTDY-SGKCGIIYCLSRKTCERVAMQLSSKFGVKTAHYHAGLSSKERFAVQRDWQSGRHT 982
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
VIV T+AFGMGI+K +VRFVIHHS+ +S+E YYQE+GRAGRDG SEC L++
Sbjct: 983 VIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYY 1034
>gi|271502372|ref|YP_003335398.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech586]
gi|270345927|gb|ACZ78692.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech586]
Length = 614
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 163/339 (48%), Positives = 233/339 (68%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R QQ+IINA ++GRD LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL++
Sbjct: 25 TFGYQQFRPGQQDIINAAINGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISLMK 84
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A L ST S+E ++ ++ A +GE LK+LY+ PE++S + F+ +L
Sbjct: 85 DQVDQLQAYGVAAACLNSTQSREQQQAVFNACRRGE--LKLLYIAPERLS-TDGFLDQLV 141
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ SLI+IDEAHC SQWGHDFRP+Y+ LG +K Q P +P++ALTATA + D+
Sbjct: 142 HWN----TSLIAIDEAHCISQWGHDFRPEYRALGQIKQQCPTLPIVALTATADDTTRQDI 197
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+L +R + VS+ +RPN+ Y + EK +D++ +I +SGIVYC SR
Sbjct: 198 ARLLDLRDPLVNVSSFDRPNIRYTLVEKFKP----LDQLWLFIHGQ--RGKSGIVYCNSR 251
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ E + L+ RG+S YHA +D + R +V + ++ LQV+V TVAFGMGINKP+VR
Sbjct: 252 AKVEDLCARLQNRGLSVGAYHAGLDNDRRSQVQEAFLRDDLQVVVATVAFGMGINKPNVR 311
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E LF+ PAD+
Sbjct: 312 FVVHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADM 350
>gi|302337379|ref|YP_003802585.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
gi|301634564|gb|ADK79991.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
Length = 601
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/347 (47%), Positives = 238/347 (68%), Gaps = 13/347 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +++ANQ+E+INA+L+GRD+ M GGGKSLCYQ+PA+L +G+ +VVSPL++L+
Sbjct: 10 SVFGYSSFKANQKEVINAILAGRDLFAAMPTGGGKSLCYQIPALLFDGLTVVVSPLIALM 69
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV +LGIPA L S+ S+ED Y+ L +GE +K+LY++PE+++ F +L
Sbjct: 70 KDQVDAALSLGIPAAFLNSSQSQEDATETYRRLYRGE--IKLLYLSPERLAVDG-FTERL 126
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
A +SL ++DEAHC S+WGHDFRPDY L L+T FP VP+ A TATAT +VQ D
Sbjct: 127 A----AFNVSLFAVDEAHCLSEWGHDFRPDYLALAQLRTAFPTVPIAAFTATATVRVQED 182
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L + ++ NR LFY V K+ V + +IA+YI ++P+ +SGIVY S
Sbjct: 183 IIRLLRLEDPFILRASFNRKELFYQVLPKTEV----LSQIAQYIG-AHPD-QSGIVYRLS 236
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ ++ L + GI A YHA MD + R + R++ + +QVIV T AFGMGI+K ++
Sbjct: 237 RKDTDKTVDYLGKLGIRALPYHAGMDKDERARNQERFNNDDVQVIVATTAFGMGIDKNNI 296
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
R+VIH L KS+E YYQE+GRAGRDGL S+C+LFF AD+ R + +
Sbjct: 297 RYVIHGDLPKSMEGYYQETGRAGRDGLESQCILFFGTADIARLNYFI 343
>gi|258620546|ref|ZP_05715583.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM573]
gi|258587061|gb|EEW11773.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM573]
Length = 620
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L GRD LVIM GGGKSLCYQ+PA++REG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALQGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTFAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP++P+MALTATA ++D+
Sbjct: 149 NL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|213408509|ref|XP_002175025.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
gi|212003072|gb|EEB08732.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
Length = 1283
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 161/338 (47%), Positives = 223/338 (65%), Gaps = 10/338 (2%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F + +R NQ E IN L+G+DV V+M GGGKSLCYQLPAV+ G+ LV+SPLLS
Sbjct: 475 FQLKGFRKNQIEAINGTLAGKDVFVLMPTGGGKSLCYQLPAVMETGNSRGVTLVISPLLS 534
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
L+QDQ+ L L IPA L+ ++ K + L + ++K+LYVTPE ++ +
Sbjct: 535 LMQDQLEHLRKLNIPALPLSGEQPSDERKQVISFLMAKKVQVKLLYVTPEGLASNGAISR 594
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
LE + L+ I IDEAHC S WGHDFRPDYK LGIL+ ++ VP+MALTATA + V+
Sbjct: 595 VLESLYTRKLLARIVIDEAHCVSHWGHDFRPDYKQLGILRDKYRGVPVMALTATANEIVK 654
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D++ L + CI+ S+ NRPNL+Y ++ K K V E+ ++I + +SGI+YC
Sbjct: 655 KDVITTLRMENCIEMKSSFNRPNLYYEIKPK----KDVFAEMHRFISNGRLD-QSGIIYC 709
Query: 323 FSRKECEQVAQELR-QRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINK 381
SR CEQVA +LR + G+ A +YHA +D R+++ W +VIV T+AFGMG++K
Sbjct: 710 LSRTSCEQVAAKLRNEYGLKAWHYHAGLDKAERQRIQSSWQAGIYKVIVATIAFGMGVDK 769
Query: 382 PDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
DVR+VIHHS KS+E YYQE+GRAGRDG P+ C++F+
Sbjct: 770 GDVRYVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFY 807
>gi|440636643|gb|ELR06562.1| hypothetical protein GMDG_08035 [Geomyces destructans 20631-21]
Length = 1823
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/368 (45%), Positives = 234/368 (63%), Gaps = 15/368 (4%)
Query: 59 GGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
GS++ WSG + A F + +R NQ E INA L G+D V+M GGG
Sbjct: 856 AGSAALMKHKWSGEVKQKLTAR------FHLRGFRQNQLEAINATLGGKDTFVLMPTGGG 909
Query: 119 KSLCYQLPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY 174
KSLCYQLPA++R G+ +V+SPLLSL+QDQV L LGI A ++ S ++ + +
Sbjct: 910 KSLCYQLPAIIRSGTTRGVTIVISPLLSLMQDQVDHLQKLGIQAFVINSEVTQSYKNMVM 969
Query: 175 KALEK--GEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFR 232
LE+ E +++LYVTPE ++KS+ +S+ H +L+ I IDEAHC SQWGHDFR
Sbjct: 970 SGLEERIPEDFVELLYVTPEMVTKSEAILSRFASLHRRHKLARIVIDEAHCVSQWGHDFR 1029
Query: 233 PDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVRE 292
PDYK LG ++ +FP VP+MALTATAT+ V+ D++ L + C ++ + NRPNL Y VR
Sbjct: 1030 PDYKELGEVRARFPGVPIMALTATATENVKVDVIHNLAMEGCQQYTQSFNRPNLTYEVRP 1089
Query: 293 KSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDI 351
K + ++ I + I + Y ++GI+Y SRK CE+VA EL R I A +YHA +
Sbjct: 1090 KPK-HEELMKSIVEIITKKY-KGQTGIIYALSRKNCEKVADELSTRYNIKACHYHAALKP 1147
Query: 352 NAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGL 411
+++V W K QVIV T+AFGMGI+K +VRFVIH ++ KS+E YYQE+GRAGRDG
Sbjct: 1148 IEKKRVQQDWQAGKWQVIVATIAFGMGIDKANVRFVIHQTMPKSLEGYYQETGRAGRDGK 1207
Query: 412 PSECLLFF 419
S C L++
Sbjct: 1208 LSGCYLYY 1215
>gi|238883901|gb|EEQ47539.1| hypothetical protein CAWG_06119 [Candida albicans WO-1]
Length = 1195
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 225/339 (66%), Gaps = 10/339 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPL 140
NVF + ++RANQ E ++A LS +DV V+M GGGKSLCYQLPA+++ +G +V+SPL
Sbjct: 465 NVFKLKSFRANQLEAVSATLSNKDVFVLMPTGGGKSLCYQLPALVKSGATKGTTVVISPL 524
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
+SL+QDQV L A I A M +S +D K EG L ++Y++PE+ +KS
Sbjct: 525 ISLMQDQVQHLLAKNIKAGMFSSKGGNDDNKHTIHLFR--EGFLDIVYLSPERANKSNAM 582
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ + K ++ +L+ + IDEAHC S WGHDFRPDY+ LG K +FP VP+MALTATA +K
Sbjct: 583 QTIMTKLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKDKFPKVPIMALTATANEK 642
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
VQ D++ L ++ + + NR NLFY ++ K S + EI YI + + +SGI+
Sbjct: 643 VQMDILHNLKMKDPVLLKQSFNRTNLFYEIKLKKSN---CLLEIKDYILSRF-SGKSGII 698
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC S++ CE + +L + G+ +YHA M + R + RW +NK+QVI T+AFGMGI+
Sbjct: 699 YCHSKQSCEHTSMKLNEYGLKTSFYHAGMSADKRFNIQKRWQENKIQVICATIAFGMGID 758
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
KPDVRFVIH L +++E YYQE+GRAGRDG SEC++++
Sbjct: 759 KPDVRFVIHLYLPRTLEGYYQETGRAGRDGNFSECVMYY 797
>gi|145632079|ref|ZP_01787814.1| ATP-dependent DNA helicase [Haemophilus influenzae 3655]
gi|145634861|ref|ZP_01790569.1| organic solvent tolerance protein [Haemophilus influenzae PittAA]
gi|144986986|gb|EDJ93516.1| ATP-dependent DNA helicase [Haemophilus influenzae 3655]
gi|145268027|gb|EDK08023.1| organic solvent tolerance protein [Haemophilus influenzae PittAA]
Length = 619
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 231/339 (68%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQRVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347
>gi|68477651|ref|XP_717138.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
gi|68477814|ref|XP_717059.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438756|gb|EAK98082.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438838|gb|EAK98163.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
Length = 1189
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 225/339 (66%), Gaps = 10/339 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPL 140
NVF + ++RANQ E ++A LS +DV V+M GGGKSLCYQLPA+++ +G +V+SPL
Sbjct: 459 NVFKLKSFRANQLEAVSATLSNKDVFVLMPTGGGKSLCYQLPALVKSGATKGTTVVISPL 518
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
+SL+QDQV L A I A M +S +D K EG L ++Y++PE+ +KS
Sbjct: 519 ISLMQDQVQHLLAKNIKAGMFSSKGGNDDNKHTIHLFR--EGFLDIVYLSPERANKSNAM 576
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ + K ++ +L+ + IDEAHC S WGHDFRPDY+ LG K +FP VP+MALTATA +K
Sbjct: 577 QTIMTKLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKDKFPKVPIMALTATANEK 636
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
VQ D++ L ++ + + NR NLFY ++ K S + EI YI + + +SGI+
Sbjct: 637 VQMDILHNLKMKDPVLLKQSFNRTNLFYEIKLKKSN---CLLEIKDYILSRF-SGKSGII 692
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC S++ CE + +L + G+ +YHA M + R + RW +NK+QVI T+AFGMGI+
Sbjct: 693 YCHSKQSCEHTSMKLNEYGLKTSFYHAGMSADKRFNIQKRWQENKIQVICATIAFGMGID 752
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
KPDVRFVIH L +++E YYQE+GRAGRDG SEC++++
Sbjct: 753 KPDVRFVIHLYLPRTLEGYYQETGRAGRDGNFSECVMYY 791
>gi|67468457|ref|XP_650264.1| recQ family helicase [Entamoeba histolytica HM-1:IMSS]
gi|56466865|gb|EAL44882.1| recQ family helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710010|gb|EMD49159.1| recQ family helicase [Entamoeba histolytica KU27]
Length = 774
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 227/360 (63%), Gaps = 9/360 (2%)
Query: 68 NWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLP 126
NW G F W R +V VF R Q +INA+L+G +VL +M GGGKSLCYQLP
Sbjct: 361 NWWGENFHWKERVKEVLHKVFHHETLRLLQYPVINAILAGHNVLALMPTGGGKSLCYQLP 420
Query: 127 AVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKM 186
++ ++G LVVSPL+SL+QDQV L LGIPA S + + FI + ++K+
Sbjct: 421 SLFKDGYTLVVSPLISLMQDQVKALNDLGIPAITCNSNNPENIDIFINDIETR---KIKI 477
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
+YV PE +S S + ++K + G S + IDEAHC SQWGHDFR Y L + FP
Sbjct: 478 VYVAPELLSCSWKMNEAMKKLYDRGLFSYLVIDEAHCISQWGHDFRQSYVELREFRKTFP 537
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
V + TATAT++V+ND++ + + + I F T NRPNL Y R KS KV +D IA
Sbjct: 538 SVQTILFTATATERVKNDILLSMGLEEAIVFNQTFNRPNLRYETRVKSP--KVEVD-IAH 594
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
YIQ+ +PN + GIV+C S+K+CE +++ L GI A +YHA +D R+KV W
Sbjct: 595 YIQQ-HPN-QCGIVFCLSKKDCESLSKFLINYGIRATHYHAGLDAKRRKKVQNDWMNGTF 652
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
V+ TVAFGMGI+KPDVRFVIH ++ S+E Y+QESGRAGRDG PS+C+++F D+ R
Sbjct: 653 LVVCATVAFGMGIDKPDVRFVIHQTMPSSIEQYFQESGRAGRDGKPSDCIIYFSMKDIAR 712
>gi|307103815|gb|EFN52072.1| hypothetical protein CHLNCDRAFT_36987 [Chlorella variabilis]
Length = 589
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 170/367 (46%), Positives = 234/367 (63%), Gaps = 14/367 (3%)
Query: 72 TFEWDSRADDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
TF W +D++R+ FG +R NQ I+N+ LS +DV V+M GGGKSLCYQLPA+
Sbjct: 25 TFAW---SDELRVRNREAFGNRDFRHNQLGIMNSTLSNKDVFVLMPTGGGKSLCYQLPAL 81
Query: 129 LREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
L +G+ +VVSPL+SLIQDQV L LGIPA + + + + ++L+
Sbjct: 82 LSKGVTIVVSPLVSLIQDQVHHLTVLGIPAAFVGGSMDWKQQARPADFFSAVLRCWQVLF 141
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
+TPEK+S S + S L+ H G L+ + IDEAHC SQWGHDFR DY L + K +FP V
Sbjct: 142 ITPEKLSASGKLQSTLDSLHRRGLLARVVIDEAHCVSQWGHDFRKDYTRLSLFKQRFPSV 201
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P++ALTATAT++VQ+D++ L I +C+ F ++ NRPNL Y VR K K +DE+A+ I
Sbjct: 202 PLLALTATATERVQHDVVAQLGINRCLVFKNSFNRPNLRYEVRRKK---KGCVDEMAELI 258
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADY---YHADMDINAREKVHMRWSKNK 365
+++ + GIVYC SR ECE+VA +L + A Y YHA + RE V W+
Sbjct: 259 LQNFLK-KCGIVYCLSRAECERVADDLEAKLADAIYPLHYHASLLPEEREAVQAEWTNGD 317
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQES-GRAGRDGLPSECLLFFRPADV 424
+ +IV T+AFGMGINK DVRFV+H+SL KS+E Y Q S GRAGRDG + C+L++ D
Sbjct: 318 VPIIVATIAFGMGINKCDVRFVLHYSLPKSLEGYLQASGGRAGRDGRKASCILYYTYGDA 377
Query: 425 PRQSSMV 431
+ M+
Sbjct: 378 AKSRHMI 384
>gi|336375158|gb|EGO03494.1| hypothetical protein SERLA73DRAFT_83518 [Serpula lacrymans var.
lacrymans S7.3]
Length = 712
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/408 (43%), Positives = 254/408 (62%), Gaps = 33/408 (8%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VF I +R QQ + NA L GRDV+ +M GGGKSL YQLPA+L G LVVSPL+SL+
Sbjct: 4 VFHIDNFRLCQQGVCNANLDGRDVVCVMPTGGGKSLTYQLPAILTPGCTLVVSPLISLMT 63
Query: 146 DQVMCLAALG--IPAHMLTSTTSKEDEKFIYK-----------ALEKGEGELKMLYVTPE 192
DQ++ L G A MLTS TSK + I +++ ++K+ YVTPE
Sbjct: 64 DQILHLREAGSKFEAVMLTSGTSKGELSSILSRLTAMASSRSHSMDDFAKDIKLCYVTPE 123
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
KI+KSK FMS L+K +L+ I IDEAHC S GHDFRPDYK L L+ FPDVP++A
Sbjct: 124 KIAKSKTFMSLLQKLVDGAKLARIVIDEAHCVSSLGHDFRPDYKELRKLRQYFPDVPILA 183
Query: 253 LTATATQKVQNDLMEMLHIRKCIK-----------FVSTINRPNLFYMVREKSSVGKVVI 301
L+AT KV ND++++L ++ + F + + R NL Y V K S VI
Sbjct: 184 LSATCPPKVLNDILKILQMKHTVDGKAATRQGTVYFSAPLYRKNLHYAVLPKPSSTTQVI 243
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG---ISADYYHADMDINAREKVH 358
+ + +YI E + ESGIVYC ++K+ E VA+ L Q I A YH+++ +E++H
Sbjct: 244 EAMVEYILEKH-RDESGIVYCSTKKDTESVAENLHQISGGVIKAGVYHSEVPDGKKEQLH 302
Query: 359 MRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLF 418
+W + +QV+ T+AFG+GI+K +VRFV+HH++SKS++ +YQESGRAGRDG S+C+L+
Sbjct: 303 RQWRQGDVQVVCATIAFGLGIDKGNVRFVLHHTMSKSLDGFYQESGRAGRDGKASDCILY 362
Query: 419 FRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEK 466
+RP D +QSS+ + LYD++R+ Q ++++ R ++F +
Sbjct: 363 YRPQDATKQSSITSKDAESQAKLYDVLRFVQ-----DLQECRKILFAR 405
>gi|152978031|ref|YP_001343660.1| ATP-dependent DNA helicase RecQ [Actinobacillus succinogenes 130Z]
gi|150839754|gb|ABR73725.1| ATP-dependent DNA helicase RecQ [Actinobacillus succinogenes 130Z]
Length = 614
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/339 (48%), Positives = 232/339 (68%), Gaps = 15/339 (4%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG A+R Q+E INA L G+D LV+MA G GKSLCYQLPA+ G+ LV+SPL+SL++
Sbjct: 17 VFGYQAFRLGQEEAINAALQGQDSLVVMATGNGKSLCYQLPALCFPGLTLVISPLISLMK 76
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIY-KALEKGEGELKMLYVTPEKISKSKRFMSKL 204
DQV L A GI A L ST + E ++ + KA+ G+LK+LY++PEK+ + F S +
Sbjct: 77 DQVDQLLANGIEADYLNSTQTFEQQQQVQNKAIS---GQLKLLYLSPEKV-MTNSFFSFI 132
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
C ++S I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA + D
Sbjct: 133 SLC----QVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADSTTRQD 188
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L + + +V + +RPN+ Y + EK ++++ ++ +SGIVYC S
Sbjct: 189 ILQNLRLNRPHLYVGSFDRPNIRYTLVEKFKP----VEQLCNFVVAQ--KGKSGIVYCNS 242
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E+V + L++RG+SA++YHA MD+ RE+V + + +QV+V T+AFGMGINK +V
Sbjct: 243 RNKSEKVTEALKKRGVSAEFYHAGMDVTERERVQRAFQHDNIQVVVATIAFGMGINKSNV 302
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H LS+S+E YYQE+GRAGRD LP+E +LF+ P+D
Sbjct: 303 RFVAHFDLSRSIEAYYQETGRAGRDDLPAEAVLFYEPSD 341
>gi|238760167|ref|ZP_04621314.1| ATP-dependent DNA helicase recQ [Yersinia aldovae ATCC 35236]
gi|238701603|gb|EEP94173.1| ATP-dependent DNA helicase recQ [Yersinia aldovae ATCC 35236]
Length = 605
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 235/340 (69%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEIINA LSG+D LV+M GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 14 DTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLM 73
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++ F+ +L
Sbjct: 74 KDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES-FLDQL 130
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
H R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FPD+P++ALTATA + + D
Sbjct: 131 ----HQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEATRGD 186
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L++ + + VS+ +RPN+ Y + EK +D++ +++Q+ +SGI+YC S
Sbjct: 187 ILRLLNLSQPLVQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSGIIYCNS 240
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 241 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 300
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 301 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADM 340
>gi|402471219|gb|EJW05076.1| RecQ family ATP-dependent DNA helicase [Edhazardia aedis USNM 41457]
Length = 1768
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/341 (47%), Positives = 228/341 (66%), Gaps = 10/341 (2%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VF + +R+ Q+E+I A LS DV V+M GGGKS+C+QLPA++ +GI LVVSPLLSLIQ
Sbjct: 1063 VFKLQNFRSQQKEVIEAALSHDDVFVLMPTGGGKSICFQLPAIITDGITLVVSPLLSLIQ 1122
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQ+ L I A ++S ++ + +F+++ L++ + K+ YVTPE I S F +
Sbjct: 1123 DQIKNLLKKNIIALAISSQLTETERRFVFEILKQPDPICKIFYVTPELIVNSSLFQDIIR 1182
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLG-ILKTQFP-DVPMMALTATATQKVQN 263
K +++ I IDEAHC SQWGHDFRPDYK +G +++ F +P+MALTATA+ +V+
Sbjct: 1183 KT----KVARIVIDEAHCVSQWGHDFRPDYKRVGTVIEDLFEHKIPLMALTATASPRVRE 1238
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D++ L +R F + NRPNL Y VR+K S K V EI +I YP S SGI+YC
Sbjct: 1239 DIINALRMRNIKIFAMSFNRPNLVYFVRKKMS--KDVDTEIVSFISTHYPES-SGIIYCL 1295
Query: 324 SRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
S+K+CE +++ + G+ +YHA + N R + W++NK +IV T+AFGMGI+K
Sbjct: 1296 SQKDCEMISERYNDKYGLKTRFYHAGLSKNERIETQNAWNENKFLIIVATIAFGMGIDKK 1355
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
DVRFVIH+SL KS+E YYQE+GRAGRDGL S C+LF+ D
Sbjct: 1356 DVRFVIHYSLPKSLEGYYQETGRAGRDGLNSTCILFYSFKD 1396
>gi|384423525|ref|YP_005632883.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae LMA3984-4]
gi|327483078|gb|AEA77485.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae LMA3984-4]
Length = 620
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 237/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY ++ G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNSMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|147673915|ref|YP_001218455.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|227116593|ref|YP_002818489.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|262167384|ref|ZP_06035092.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC27]
gi|146315798|gb|ABQ20337.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|227012043|gb|ACP08253.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|262024186|gb|EEY42879.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC27]
Length = 620
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 237/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L +++ +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLKEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|419835117|ref|ZP_14358565.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46B1]
gi|421341784|ref|ZP_15792193.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43B1]
gi|421353007|ref|ZP_15803345.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-45]
gi|423733466|ref|ZP_17706697.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41B1]
gi|424007762|ref|ZP_17750719.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-44C1]
gi|395946961|gb|EJH57619.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43B1]
gi|395955466|gb|EJH66062.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-45]
gi|408632325|gb|EKL04786.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41B1]
gi|408859258|gb|EKL98919.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46B1]
gi|408867878|gb|EKM07231.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-44C1]
Length = 611
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 237/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 23 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 83 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTTE-FIERLS 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 140 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + + GI+YC SR
Sbjct: 196 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQH--GQCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 348
>gi|9945008|gb|AAG03075.1|AF294728_1 Sgs1p [Candida albicans]
Length = 1189
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 224/339 (66%), Gaps = 10/339 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPL 140
NVF + ++RANQ E ++A LS +DV V+M GGGKSLCYQLPA+++ +G +V+SPL
Sbjct: 459 NVFKLKSFRANQLEAVSATLSNKDVFVLMPTGGGKSLCYQLPALVKSGATKGTTVVISPL 518
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
+SL+QDQV L A I A M +S +D K EG L ++Y++PE+ +KS
Sbjct: 519 ISLMQDQVQHLLAKNIKAGMFSSKGGNDDNKHTIHLFR--EGFLDIVYLSPERANKSNAM 576
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ + K ++ +L+ + IDEAHC S WGHDFRPDY+ LG K +FP VP+MALTATA +K
Sbjct: 577 QTIMTKLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKDKFPKVPIMALTATANEK 636
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
VQ D++ L I+ + + NR NLFY ++ K S + EI YI + + +SGI+
Sbjct: 637 VQMDILHNLKIKDPVLLKQSFNRTNLFYEIKLKKSN---CLLEIKDYILSRF-SGKSGII 692
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC S++ CE + +L + G+ +YHA M + R + RW +NK+QVI T+AFGMGI+
Sbjct: 693 YCHSKQSCEHTSMKLNEYGLKTSFYHAGMSADKRFNIQKRWQENKIQVICATIAFGMGID 752
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
KPDVRFVIH L +++E YYQE+GRAG DG SEC++++
Sbjct: 753 KPDVRFVIHLYLPRTLEGYYQETGRAGHDGNFSECVMYY 791
>gi|301106430|ref|XP_002902298.1| bloom syndrome protein [Phytophthora infestans T30-4]
gi|262098918|gb|EEY56970.1| bloom syndrome protein [Phytophthora infestans T30-4]
Length = 1022
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/388 (43%), Positives = 242/388 (62%), Gaps = 21/388 (5%)
Query: 78 RADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVV 137
RA V +VFG A+R +Q+ + SGRDV V+M GGGKSLC+QLPA + +G+ +V+
Sbjct: 207 RAKRVLRDVFGHNAFRPSQERTVMEAFSGRDVFVLMPTGGGKSLCFQLPACIDDGVTIVI 266
Query: 138 SPLLSLIQDQVMCLAALGIP-AHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
SPL+SLIQDQV L AL + A++ +++ I L + +KMLYVTPEKI+
Sbjct: 267 SPLVSLIQDQVQQLEALDVGVANLKGDQDYATEQRPIISELFSNQIRIKMLYVTPEKIAS 326
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
S + + G L+ IDEAHC SQWGHDFR DY NLG L+T+FP VP+MALTAT
Sbjct: 327 SGMLSNLFKSLEKRGLLARFVIDEAHCISQWGHDFRKDYLNLGTLRTKFPSVPIMALTAT 386
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A + + D+++ L +R S+ NRPNL Y VR+K+S + EIA ++++ +
Sbjct: 387 ANSQTEADIVKNLKLRNPFITRSSFNRPNLTYDVRKKTS---KFMSEIADFVRKHI--DD 441
Query: 317 SGIVYCFSRKECEQVAQEL--------RQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
SGI+YC S+K+CEQ A++L ++ +YHA ++ R H WSK K+++
Sbjct: 442 SGIIYCLSKKDCEQTAEKLIKALGFEHTRKASQISFYHAGLEAGDRAYRHHEWSKGKIKL 501
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
I TVAFGMGINKPDVR+VIHH++ +SV YYQE+GRAGRDG + C+L++ D+ R+
Sbjct: 502 ICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAGRDGEVANCILYYSFLDLTRRR 561
Query: 429 SMVF-------YENSGLQNLYDIVRYSQ 449
++ + N LQNL + + +
Sbjct: 562 KLITKDRDNMQHRNVHLQNLRRMTEFCE 589
>gi|417228931|ref|ZP_12030689.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0959]
gi|386208266|gb|EII12771.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0959]
Length = 611
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLILISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|127514402|ref|YP_001095599.1| ATP-dependent DNA helicase RecQ [Shewanella loihica PV-4]
gi|126639697|gb|ABO25340.1| ATP-dependent DNA helicase RecQ [Shewanella loihica PV-4]
Length = 610
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/347 (48%), Positives = 230/347 (66%), Gaps = 14/347 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
VFG +R Q+E+I V G+D LVIM GGGKSLCYQLPA++ G+ LVVSPL+SL+
Sbjct: 22 TVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVLHGLTLVVSPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L +G+ A L S+ S+E+ IY+ L GE LK+LYV+PE++ + F+ +L
Sbjct: 82 KDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGE--LKLLYVSPERL-LTDSFIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
H LSL +IDEAHC SQWGHDFRP+Y LG LK FP VPMMALTATA + + D
Sbjct: 139 ----HNLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMALTATADKATRED 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ + L I + +++ +RPN+ Y V EK + +++ ++IQ N SGI+YC S
Sbjct: 195 ICQRLGIAP-FELLTSFDRPNIRYTVAEKLNAA----NQLRQFIQAQ--NGNSGIIYCSS 247
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R+ ++VA+ LR +G AD YHA R + R+ K++L ++V TVAFGMGINK +V
Sbjct: 248 RRRVDEVAERLRMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGINKSNV 307
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
RFV+H+ + KSVE YYQE+GRAGRDGL +E + F PAD+ R ++
Sbjct: 308 RFVVHYDIPKSVEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLI 354
>gi|261494329|ref|ZP_05990823.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309978|gb|EEY11187.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 599
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/349 (47%), Positives = 237/349 (67%), Gaps = 15/349 (4%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
++ A V NVFG +R Q+E+INAVL RD LVIM GGGKSLCYQ+PA+ +GI L
Sbjct: 2 NTTAISVLNNVFGYQKFRDGQEEVINAVLENRDCLVIMTTGGGKSLCYQVPALCLDGITL 61
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKI 194
V+SPL+SL++DQV L GI A L ST + E+++ + KAL G+LK+LY++PEK+
Sbjct: 62 VISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQLVEQKALS---GQLKLLYLSPEKV 118
Query: 195 SKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALT 254
++ F + C ++S I++DEAHC SQWGHDFRP+Y LG L+ FPDVP+MALT
Sbjct: 119 -MTQGFFHFISLC----KISFIAVDEAHCVSQWGHDFRPEYTLLGGLRNTFPDVPLMALT 173
Query: 255 ATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPN 314
ATA ++D++ L + ++ + +RPN+ Y V+EK ++++ K+I S
Sbjct: 174 ATADPTTRSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKP----LEQLIKFI--SKQQ 227
Query: 315 SESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
+SGIVYC SRK+ E++ ++L R IS YHA M RE+V + ++ +Q++V T+A
Sbjct: 228 GKSGIVYCNSRKKVEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQRDDIQIVVATIA 287
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
FGMGINK +VRFV+H L +S+E+YYQE+GRAGRD LPSE +LF+ P+D
Sbjct: 288 FGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPSD 336
>gi|229521104|ref|ZP_04410525.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TM 11079-80]
gi|229341989|gb|EEO06990.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TM 11079-80]
Length = 620
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 237/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTTE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQH--GQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|419827881|ref|ZP_14351373.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-1A2]
gi|419831541|ref|ZP_14355010.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A2]
gi|422915915|ref|ZP_16950269.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02A1]
gi|423810983|ref|ZP_17714862.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55C2]
gi|423846250|ref|ZP_17718634.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59A1]
gi|423878417|ref|ZP_17722265.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-60A1]
gi|423996324|ref|ZP_17739601.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02C1]
gi|424015029|ref|ZP_17754887.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55B2]
gi|424018140|ref|ZP_17757952.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59B1]
gi|424623518|ref|ZP_18062004.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A1]
gi|424628094|ref|ZP_18066413.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-51A1]
gi|424632040|ref|ZP_18070170.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-52A1]
gi|424635129|ref|ZP_18073161.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55A1]
gi|424638950|ref|ZP_18076857.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A1]
gi|424647207|ref|ZP_18084895.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A1]
gi|443526077|ref|ZP_21092179.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-78A1]
gi|341641612|gb|EGS66137.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02A1]
gi|408017262|gb|EKG54777.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A1]
gi|408022773|gb|EKG59966.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-52A1]
gi|408028170|gb|EKG65081.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A1]
gi|408028453|gb|EKG65344.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55A1]
gi|408038274|gb|EKG74625.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A1]
gi|408059843|gb|EKG94584.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-51A1]
gi|408624245|gb|EKK97194.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-1A2]
gi|408637259|gb|EKL09328.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55C2]
gi|408644873|gb|EKL16546.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-60A1]
gi|408646151|gb|EKL17772.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59A1]
gi|408652428|gb|EKL23643.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A2]
gi|408855314|gb|EKL95021.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02C1]
gi|408862584|gb|EKM02091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55B2]
gi|408871261|gb|EKM10504.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59B1]
gi|443455544|gb|ELT19309.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-78A1]
Length = 611
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 237/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 23 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 83 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 140 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + + GI+YC SR
Sbjct: 196 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQH--GQCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 348
>gi|221482271|gb|EEE20626.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
Length = 1625
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/365 (45%), Positives = 224/365 (61%), Gaps = 3/365 (0%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F + +R D + VFG +R Q INAV+SGRD ++M GGGKSLCYQLPA G
Sbjct: 625 FPFSARVDRINKEVFGYTDFRGLQLGAINAVMSGRDCFLVMPTGGGKSLCYQLPAYALGG 684
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
+ LV+SPLL+L+ DQ+ L LG+ A + SK D +Y L + L++L TPE
Sbjct: 685 LTLVISPLLALMGDQLRSLKNLGVEAAKIDGEISKSDLLALYDELSQPSFSLRVLMATPE 744
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
+++S+ + L H G LSL+ +DEAHC QWG DFR DY +LG LK FPDVP++A
Sbjct: 745 FLARSEALTTVLRSVHARGLLSLLVVDEAHCVCQWGEDFRADYLSLGRLKKTFPDVPLLA 804
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTA+A+ V +++ +L I K + F +INRPNLF VREKS + I +I + +
Sbjct: 805 LTASASPDVFSEVKRILRIPKSVDFRMSINRPNLFLEVREKS---RQTIYDIHRLLSSPA 861
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
+E+GI+YC S K+CE VA L I A YHA M R++ W + VIV T
Sbjct: 862 LRNEAGIIYCLSIKDCEVVASHLISLEIRAAPYHAKMASRRRQETQAAWMAGDIAVIVST 921
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
VAFG+G+++PDVRFV HHS+ S+E YYQE GRAGRDG S C+LF+ P DV R S ++
Sbjct: 922 VAFGLGVDRPDVRFVFHHSMPPSLERYYQEIGRAGRDGYASRCILFYSPGDVQRVSKLLV 981
Query: 433 YENSG 437
G
Sbjct: 982 RPKRG 986
>gi|432399769|ref|ZP_19642542.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE25]
gi|432408892|ref|ZP_19651593.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE28]
gi|432725287|ref|ZP_19960200.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE17]
gi|432729896|ref|ZP_19964768.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE18]
gi|432743585|ref|ZP_19978298.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE23]
gi|432988316|ref|ZP_20176995.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE217]
gi|433113097|ref|ZP_20298944.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE150]
gi|430912931|gb|ELC34103.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE25]
gi|430925933|gb|ELC46529.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE28]
gi|431262506|gb|ELF54496.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE17]
gi|431270666|gb|ELF61828.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE18]
gi|431280876|gb|ELF71785.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE23]
gi|431502029|gb|ELH80922.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE217]
gi|431624586|gb|ELI93202.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE150]
Length = 604
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/349 (46%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 5 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 64
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + GE +++LY+ PE++
Sbjct: 65 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGE--IRLLYIAPERLM 122
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 123 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPMLPFMALTA 177
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 178 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 231
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 232 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 291
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 292 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 340
>gi|134109345|ref|XP_776787.1| hypothetical protein CNBC2780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259467|gb|EAL22140.1| hypothetical protein CNBC2780 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1217
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 221/355 (62%), Gaps = 13/355 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR- 130
T W + VF +P +R +Q+E I+ ++GRDV V+M GGGKSL YQLPA+
Sbjct: 371 THRWSKEVNQKLRQVFKLPNFRKHQKEAIDETMAGRDVFVLMPTGGGKSLTYQLPAICSS 430
Query: 131 ---EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
G+ VVSPL+SLI DQ L + GIPA T ++ D+ ++ L K E K++
Sbjct: 431 GKTRGVTFVVSPLISLINDQTRHLISRGIPAIAYTGDLTQRDKNLAHEELSKREPITKVV 490
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPE +S S L +L+ IDEAHC SQWGHDFR DY LG L+ +P
Sbjct: 491 YVTPEMMSMGGHIKSILRGLLQRKQLARFVIDEAHCVSQWGHDFRADYLRLGELRRDYPG 550
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP+MALTATA KVQ D++ L I C+ + NRPNL Y VR K+S VI EI +
Sbjct: 551 VPIMALTATAQNKVQEDIIRSLRIEGCVCLRQSFNRPNLHYEVRPKTS---SVIQEIVAF 607
Query: 308 I--QESYPNSESGIVYCFSRKECEQVAQELRQ-RGISADYYHADMDINAREKVHMRWSKN 364
+ QE+ SGIVYC SR CE +A++LR+ G+ A +YHA M R K+ W +
Sbjct: 608 VHTQEA---RASGIVYCNSRDNCENLAKKLREDHGLRAYHYHAGMTKENRRKMQEGWQDH 664
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
K +++V T+AFGMGI+KPDVR+VIHH L +S+E YYQE+GRAGRDG PS C+L++
Sbjct: 665 KFEIMVATIAFGMGIDKPDVRYVIHHHLPRSLEGYYQETGRAGRDGNPSTCILYY 719
>gi|428320783|ref|YP_007118665.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
gi|428244463|gb|AFZ10249.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
Length = 731
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/340 (47%), Positives = 235/340 (69%), Gaps = 9/340 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG ++R QQEI+ A L RD++++M GGGKSLC+QLPA+L+ G+ +VVSPL++L+
Sbjct: 21 HFFGYDSFRPGQQEIVEAALQKRDMMIVMPTGGGKSLCFQLPALLKPGLTVVVSPLIALM 80
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L GI A L ST S ++ + A+ EG++K+LYV PE++ +RF+ L
Sbjct: 81 QDQVEALQDNGIGATFLNSTLSTQETRSRETAIL--EGKIKLLYVAPERLL-GERFLPFL 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ + +S +IDEAHC S+WGHDFRP+Y+ + ++ ++PD+P+MALTATAT++V+ D
Sbjct: 138 DIVANKLGISAFAIDEAHCVSEWGHDFRPEYRQMQRVRDRYPDIPIMALTATATERVRQD 197
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L +R V++ NRPNL+Y VR K+ K E+ + IQ+ SGI+YC S
Sbjct: 198 IIQQLTLRNPYIHVASFNRPNLYYEVRPKT---KHSFAEVLQIIQK---KGGSGIIYCLS 251
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E+VA +L+Q GI+A YHA M+ R R+ ++ +QV+V T+AFGMGINKPDV
Sbjct: 252 RKKVEEVAYKLQQSGIAALPYHAGMNDVDRATNQTRFIRDDVQVMVATIAFGMGINKPDV 311
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFVIH+ L K++E YYQESGRAGRD P+ C LFF DV
Sbjct: 312 RFVIHYDLPKNLEGYYQESGRAGRDNEPAHCSLFFGYGDV 351
>gi|237842165|ref|XP_002370380.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211968044|gb|EEB03240.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|221502834|gb|EEE28548.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 1626
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/365 (45%), Positives = 224/365 (61%), Gaps = 3/365 (0%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F + +R D + VFG +R Q INAV+SGRD ++M GGGKSLCYQLPA G
Sbjct: 626 FPFSARVDRINKEVFGYTDFRGLQLGAINAVMSGRDCFLVMPTGGGKSLCYQLPAYALGG 685
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
+ LV+SPLL+L+ DQ+ L LG+ A + SK D +Y L + L++L TPE
Sbjct: 686 LTLVISPLLALMGDQLRSLKNLGVEAAKIDGEISKGDLLALYDELSQPSFSLRVLMATPE 745
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
+++S+ + L H G LSL+ +DEAHC QWG DFR DY +LG LK FPDVP++A
Sbjct: 746 FLARSEALTTVLRSVHARGLLSLLVVDEAHCVCQWGEDFRADYLSLGRLKKTFPDVPLLA 805
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTA+A+ V +++ +L I K + F +INRPNLF VREKS + I +I + +
Sbjct: 806 LTASASPDVFSEVKRILRIPKSVDFRMSINRPNLFLEVREKS---RQTIYDIHRLLSSPA 862
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
+E+GI+YC S K+CE VA L I A YHA M R++ W + VIV T
Sbjct: 863 LRNEAGIIYCLSIKDCEVVASHLISLDIRAAPYHAKMASRRRQETQAAWMAGDIAVIVST 922
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
VAFG+G+++PDVRFV HHS+ S+E YYQE GRAGRDG S C+LF+ P DV R S ++
Sbjct: 923 VAFGLGVDRPDVRFVFHHSMPPSLERYYQEIGRAGRDGYASRCILFYSPGDVQRVSKLLV 982
Query: 433 YENSG 437
G
Sbjct: 983 RPKRG 987
>gi|417819060|ref|ZP_12465679.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE39]
gi|423944442|ref|ZP_17733123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-40]
gi|423973888|ref|ZP_17736668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-46]
gi|340042950|gb|EGR03911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE39]
gi|408662447|gb|EKL33390.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-40]
gi|408666471|gb|EKL37258.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-46]
Length = 611
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 237/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 23 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 83 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 140 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + + GI+YC SR
Sbjct: 196 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQH--GQCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 348
>gi|123426519|ref|XP_001307056.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121888663|gb|EAX94126.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1279
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/360 (43%), Positives = 231/360 (64%), Gaps = 4/360 (1%)
Query: 68 NWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
N+ E+ + ++V NVFG ++R Q I A + G DV ++M GGGKSLCY L
Sbjct: 548 NYGLPDEYINVLNEVNKNVFGHDSFRGVQLPAIAAAVRGNDVFILMPTGGGKSLCYMLTG 607
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
+++ G+ LV+SPLLSLI+DQV L +L I A ++ T +E+E I E +G ++ L
Sbjct: 608 MVQGGVTLVISPLLSLIKDQVDQLKSLNIQAELINYETKQEEESKILN--EAKQGRVRFL 665
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
Y+TPEK++ S L + +L+ I +DEAHC S WGHDFRPDY +G ++ +P+
Sbjct: 666 YMTPEKLNLSGNVSQFLNDIYSQNKLTRIVVDEAHCVSHWGHDFRPDYMQIGKVRENYPE 725
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP+MALTATATQKV D E L ++ F T NRPN+ + V K + ++I +
Sbjct: 726 VPLMALTATATQKVIEDCYEQLCMKNVEIFHQTFNRPNINFEVHAKEGTTEGCYNQIVNW 785
Query: 308 I-QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
I Q+ Y N+ SGI++C + + E+++ L QRG+ +YH MD+ R+ RW +N++
Sbjct: 786 IYQKGYDNA-SGIIFCMTTRTTEEMSIYLNQRGLRTLHYHGKMDMEHRKDTQDRWMRNEI 844
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
++V T+AFGMGINKPDVRFVIHHS+ KS+E YYQE+GR+GRDG ++C+L + AD+ +
Sbjct: 845 NIVVATLAFGMGINKPDVRFVIHHSIPKSIEEYYQEAGRSGRDGKKTDCILLYSSADIDK 904
>gi|381403551|ref|ZP_09928235.1| ATP-dependent DNA helicase RecQ [Pantoea sp. Sc1]
gi|380736750|gb|EIB97813.1| ATP-dependent DNA helicase RecQ [Pantoea sp. Sc1]
Length = 608
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 234/355 (65%), Gaps = 13/355 (3%)
Query: 70 SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
S ++ A V + FG +R QQ IIN LSGRD LV+M GGGKSLCYQ+PA++
Sbjct: 4 SAVLNQEALAQQVLQDTFGYQQFRPGQQTIINQALSGRDCLVVMPTGGGKSLCYQIPALV 63
Query: 130 REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYV 189
REG+ LVVSPL+SL++DQV L A G+ A L ST ++E ++ + G +K+LY+
Sbjct: 64 REGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTMTREQQQTVMADCRTGR--VKLLYI 121
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
PE++ F+ L ++++DEAHC SQWGHDFRP+Y LG L+ +FP+VP
Sbjct: 122 APERLMMDN-FLDNLAHWQPV----MLAVDEAHCISQWGHDFRPEYGALGRLRERFPEVP 176
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATA + +ND++ +LH++ + +S+ +RPN+ Y + EK D++ +Y+Q
Sbjct: 177 VMALTATADETTRNDIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKP----TDQLLRYVQ 232
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVI 369
+ + GI+YC SR + E A L+ RG+S YHA +D R +V + ++ LQ++
Sbjct: 233 DQ--RGKCGIIYCNSRAKVEDTAARLQSRGLSVGAYHAGIDSEQRARVQEAFQRDDLQIV 290
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 291 VATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|217969471|ref|YP_002354705.1| ATP-dependent DNA helicase RecQ [Thauera sp. MZ1T]
gi|217506798|gb|ACK53809.1| ATP-dependent DNA helicase RecQ [Thauera sp. MZ1T]
Length = 657
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 235/347 (67%), Gaps = 8/347 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG PA+R Q EI+ V G D LV+M GGGKSLCYQ+PA+LR G A+VVSPL++L+
Sbjct: 64 HVFGYPAFRGEQGEIVEHVAGGGDALVLMPTGGGKSLCYQIPALLRHGTAIVVSPLIALM 123
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L G+ A L S+ E + + +AL +GEL++LYV PE++ + RF+ +L
Sbjct: 124 QDQVSALVEAGVRAAFLNSSLDMERARAVERAL--WDGELELLYVAPERL-MTPRFLDQL 180
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ GRLSL +IDEAHC SQWGHDFRP+Y L IL ++P +P +ALTATA ++ + +
Sbjct: 181 DHLRDTGRLSLFAIDEAHCVSQWGHDFRPEYLQLSILPERYPAIPRIALTATADRQTREE 240
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ E L+++ +FVS+ +RPN+ Y + EK+ + ++D +I+E P ++GIVYC S
Sbjct: 241 IAERLNLQAARRFVSSFDRPNIRYTIVEKNDPRRQLLD----FIREECPG-QAGIVYCLS 295
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R++ E+ A L+++G++A YHA M R + R+ + ++V T+AFGMGI+KPDV
Sbjct: 296 RRKVEETAAWLQEQGLAALPYHAGMTQEIRAEHQSRFLREDGLIMVATIAFGMGIDKPDV 355
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
RFV H L +S+E YYQE+GRAGRDGLP++ + + DV +Q M+
Sbjct: 356 RFVAHLDLPRSIEGYYQETGRAGRDGLPAQAWMAWGAQDVVQQRRMI 402
>gi|422908717|ref|ZP_16943388.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-09]
gi|341638676|gb|EGS63315.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-09]
Length = 611
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 237/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 23 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 83 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 140 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + + GI+YC SR
Sbjct: 196 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQH--GQCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 348
>gi|229527301|ref|ZP_04416694.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 12129(1)]
gi|229335309|gb|EEO00793.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 12129(1)]
Length = 620
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCSNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|238789392|ref|ZP_04633178.1| ATP-dependent DNA helicase recQ [Yersinia frederiksenii ATCC 33641]
gi|238722535|gb|EEQ14189.1| ATP-dependent DNA helicase recQ [Yersinia frederiksenii ATCC 33641]
Length = 610
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/346 (45%), Positives = 237/346 (68%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQEIINA L+G+D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQEIINATLAGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L H R L+++DEAHC SQWGHDFRP+Y+ LG LK +FPD+P++ALTATA
Sbjct: 131 -FLDQL----HQWRPGLLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L++ + + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 EATRGDIVRLLNLDQPLIQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADM 345
>gi|110807486|ref|YP_691006.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 5 str. 8401]
gi|415859116|ref|ZP_11533441.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 2457T]
gi|417704375|ref|ZP_12353472.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-218]
gi|417725388|ref|ZP_12374173.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-304]
gi|417730594|ref|ZP_12379278.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-671]
gi|417735693|ref|ZP_12384331.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2747-71]
gi|417740471|ref|ZP_12389038.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 4343-70]
gi|417745522|ref|ZP_12394040.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2930-71]
gi|420344000|ref|ZP_14845461.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-404]
gi|424839868|ref|ZP_18264505.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 5a str. M90T]
gi|110617034|gb|ABF05701.1| ATP-dependent DNA helicase [Shigella flexneri 5 str. 8401]
gi|313647133|gb|EFS11588.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 2457T]
gi|332750946|gb|EGJ81351.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 4343-70]
gi|332751036|gb|EGJ81440.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-671]
gi|332752274|gb|EGJ82665.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2747-71]
gi|332764332|gb|EGJ94567.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2930-71]
gi|332998187|gb|EGK17790.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-218]
gi|333013511|gb|EGK32880.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-304]
gi|383468920|gb|EID63941.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 5a str. M90T]
gi|391262699|gb|EIQ21714.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-404]
Length = 609
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|384247288|gb|EIE20775.1| ATP-dependent DNA helicase [Coccomyxa subellipsoidea C-169]
Length = 455
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/357 (47%), Positives = 231/357 (64%), Gaps = 11/357 (3%)
Query: 80 DDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSP 139
D V L VFG A+R Q+ +I VL RD V+M GGGKSLCYQLPAV+ G+ +V+SP
Sbjct: 5 DFVNLKVFGNSAFREQQRRVIETVLKDRDAFVLMPTGGGKSLCYQLPAVISRGLTVVISP 64
Query: 140 LLSLIQDQVMCL---AALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
LLSL+QDQV L A+ G+PA L S ++ +++ ++ L+K + +K+LY+TPE++
Sbjct: 65 LLSLMQDQVRALVTTASGGVPATYLNSQQTEREKRAVFSELQKEQPTVKLLYITPEQLVA 124
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK-TQFPDVPMMALTA 255
S S LE G L+ +DEAHC SQWGHDFRPDYK +G +K ++F +P++ALTA
Sbjct: 125 SAALASTLESLQRRGLLARFVVDEAHCVSQWGHDFRPDYKKIGEVKASKFSRIPILALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSV----GKVV-IDEIAKYIQE 310
TAT KV+ D++ +L + C F + R NL V +K + GK ++ + YI+
Sbjct: 185 TATDKVKTDVLSILGMSSCPVFTVSFFRSNLVLSVVKKPTGRTPEGKPAELEALVNYIKA 244
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHMRWSKNKLQVI 369
N+ SGI+Y SR VA L++ G ISA YHA M R KV W +LQV+
Sbjct: 245 QGKNA-SGIIYVISRDNTATVAAYLKEEGEISAHSYHAGMTPKQRVKVQNDWRSGELQVV 303
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
V T+AFGMGI+KPDVRFV+H+SLSKS+E YYQE+GRAGRDG SEC+L + D+PR
Sbjct: 304 VATIAFGMGIDKPDVRFVVHYSLSKSIEGYYQEAGRAGRDGKHSECVLLYAAGDIPR 360
>gi|449517902|ref|XP_004165983.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/365 (44%), Positives = 234/365 (64%), Gaps = 10/365 (2%)
Query: 72 TFEWDSRADDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+E DD L +FG A+R Q E A S +D ++M GGGKSLCYQLPA
Sbjct: 178 TYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPAT 237
Query: 129 LREGIALVVSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ G+ +V+SPLLSLIQDQ++ L GIP+ L S + + + L + + K+L
Sbjct: 238 VQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLL 297
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPE+I+ ++ F+ L H +L+ +DEAHC SQWGHDFRPDY+NLG LK FPD
Sbjct: 298 YVTPERIA-TQSFLEILRFMHMKKQLASFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPD 356
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP+MALTATAT V+ D+++ L I + + +RPNL Y V K+ K + ++ ++
Sbjct: 357 VPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT---KEPLVQLGQF 413
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKL 366
I+E + N + GIVYC S+ EC +V++ L ++ I A YYHA + R V +W +
Sbjct: 414 IKERFKN-QCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLVQKKWHVGDI 472
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
Q++ T+AFGMGI+KPDVRFVIH+++SKS+E+YYQESGRAGRDG P+ C++ ++ D R
Sbjct: 473 QIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSR 532
Query: 427 QSSMV 431
M+
Sbjct: 533 VVCML 537
>gi|30064881|ref|NP_839052.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 2457T]
gi|56480445|ref|NP_709628.2| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 301]
gi|384545430|ref|YP_005729494.1| ATP-dependent DNA helicase [Shigella flexneri 2002017]
gi|30043141|gb|AAP18863.1| ATP-dependent DNA helicase [Shigella flexneri 2a str. 2457T]
gi|56383996|gb|AAN45335.2| ATP-dependent DNA helicase [Shigella flexneri 2a str. 301]
gi|281603217|gb|ADA76201.1| ATP-dependent DNA helicase [Shigella flexneri 2002017]
Length = 611
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|407035712|gb|EKE37810.1| recQ family helicase, putative [Entamoeba nuttalli P19]
Length = 774
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 227/360 (63%), Gaps = 9/360 (2%)
Query: 68 NWSG-TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLP 126
NW G F W R +V VF R Q +INA+L+G +VL +M GGGKSLCYQLP
Sbjct: 361 NWWGENFHWKERVKEVLHKVFHHETLRLLQYPVINAILAGHNVLALMPTGGGKSLCYQLP 420
Query: 127 AVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKM 186
++ ++G LVVSPL+SL+QDQV L LGIPA S + + FI + ++K+
Sbjct: 421 SLFKDGYTLVVSPLISLMQDQVKALNDLGIPAITCNSNNPENIDIFINDIETR---KIKI 477
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
+YV PE +S S + ++K + G S + IDEAHC SQWGHDFR Y L + FP
Sbjct: 478 VYVAPELLSCSWKMNEAMKKLYDRGLFSYLVIDEAHCISQWGHDFRQSYVELREFRKTFP 537
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
V + TATAT++V+ND++ + + + I F T NRPNL Y R KS KV +D IA
Sbjct: 538 SVQTILFTATATERVKNDILLSMGLEEAIVFNQTFNRPNLRYETRVKSP--KVEVD-IAH 594
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKL 366
YIQ+ +PN + GIV+C S+K+CE +++ L GI A +YHA +D R+KV W
Sbjct: 595 YIQQ-HPN-QCGIVFCLSKKDCESLSKFLVNYGIRATHYHAGLDAKRRKKVQNDWMNGTF 652
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
V+ TVAFGMGI+KPDVRFVIH ++ S+E Y+QE+GRAGRDG PS+C+++F D+ R
Sbjct: 653 LVVCATVAFGMGIDKPDVRFVIHQTMPSSIEQYFQEAGRAGRDGKPSDCIIYFNMKDISR 712
>gi|424658095|ref|ZP_18095363.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-16]
gi|408056663|gb|EKG91539.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-16]
Length = 611
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 23 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 83 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 140 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 196 MQRLQLNEPQQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCGNHIRAASYHAGMDTDERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 348
>gi|365987708|ref|XP_003670685.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
gi|343769456|emb|CCD25442.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
Length = 1110
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/417 (40%), Positives = 251/417 (60%), Gaps = 30/417 (7%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPL 140
+ F +P +R NQ E IN+ L G+DV V+M GGGKSLCYQLPA+++ +G ++V+SPL
Sbjct: 468 HTFKLPGFRPNQLEAINSTLIGKDVFVLMPTGGGKSLCYQLPAIVKSGKTKGTSIVISPL 527
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
+SL+QDQV L L I A M++S + + K + +G+L ++Y++PE I+ SK+
Sbjct: 528 ISLMQDQVEHLLDLNIKASMISSKGTTQQRKQTFSLF--SQGKLDLIYISPEMIASSKQC 585
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
++K + G L+ I +DEAHC S WGHDFRPDYK L K+++P +PMM LTATA +
Sbjct: 586 KRVIKKLYQEGNLARIIVDEAHCVSSWGHDFRPDYKELYFFKSEYPKIPMMVLTATANEH 645
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V+ D++ L +R + + NR NLFY V K K IDE+ I+ + +SGI+
Sbjct: 646 VRQDIVTNLRLRNPVFLKQSFNRTNLFYEVLRKD---KDSIDEMIDAIKYHF-TEQSGII 701
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC S+ CE+VA +L+ I YYHA MD + R + W +NKLQVI TVAFGMGI+
Sbjct: 702 YCHSKNSCEKVALQLQNNQIRCGYYHAGMDPDERMMIQRDWQRNKLQVICATVAFGMGID 761
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQN 440
K DVRF+ H ++ +++E YYQE+GRAGRDG PS C+ ++ DV M+ ++S
Sbjct: 762 KSDVRFIYHFTVPRTLEGYYQETGRAGRDGKPSYCIGYYSMKDVRAIQKMIQKDSS---- 817
Query: 441 LYDIVRYSQYPLHWNIEKV-RLVIFEKLQQVNLFCMVVLAGHAQCIISLLQDIQDNN 496
++K+ R F+KLQ+V +C + + ++S + D N
Sbjct: 818 ---------------LDKISREKHFDKLQEVMKYCENIKECRRKLVLSYFNEEFDRN 859
>gi|166240658|ref|XP_645178.2| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|165988694|gb|EAL71344.2| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 973
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 235/355 (66%), Gaps = 4/355 (1%)
Query: 74 EWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL-REG 132
EW + ++FG +R Q E IN++L RD V + GGGKSLC+Q+P+++ G
Sbjct: 461 EWHELVETCNRDIFGNKEFRNLQIEAINSILHDRDTFVSLPTGGGKSLCFQIPSIVDHRG 520
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEG-ELKMLYVTP 191
+ V+SPLL+L+QDQV L +LGIPA + S+ S+ + + + L GE +LK++Y+TP
Sbjct: 521 VTFVISPLLALMQDQVHKLKSLGIPAESINSSGSQRENRDVLDQLLNGETCKLKLIYITP 580
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++++S+ F+ L++ + GRL + +DEAHC S+WGH FRP Y+ + + +FP VP+
Sbjct: 581 ERLAQSE-FLHLLDQLYDQGRLRRLVVDEAHCISEWGHSFRPKYRLISTFRDRFPSVPIS 639
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
A TA+AT V+ D+ L + I S+ RPNL Y VR+K S + ++ +I +I
Sbjct: 640 AFTASATPNVEIDIKNSLKMVNPITINSSFLRPNLLYQVRQKQSDEESLLKDIYNFISFK 699
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
YPNS +GI+YC + +ECE VA L +RG+S+++YHA + R K+ W+ + +++
Sbjct: 700 YPNS-TGIIYCATVRECEIVADYLSERGLSSNFYHAKLSNTQRSKLQKDWTNGEFKIVCT 758
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
T+AFGMGI+K D RFVIHHS+ +S+E+YYQ++GRAGRDG S+CLLF+ +D+ R
Sbjct: 759 TIAFGMGIDKGDTRFVIHHSMPQSMESYYQQTGRAGRDGKHSDCLLFYNKSDLMR 813
>gi|261213176|ref|ZP_05927459.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC341]
gi|260837594|gb|EEX64288.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC341]
Length = 620
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP++P+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNNIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|325187369|emb|CCA21907.1| bloom syndrome protein putative [Albugo laibachii Nc14]
Length = 590
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/402 (43%), Positives = 240/402 (59%), Gaps = 26/402 (6%)
Query: 74 EWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGI 133
E R D +FG ++R Q+ +I A ++ +D V+M GGGKSLCYQLPAVL +G+
Sbjct: 151 ESSDRYDRANALIFGNASFRTIQRSVIEATMAQKDCFVLMPTGGGKSLCYQLPAVLSQGV 210
Query: 134 ALVVSPLLSLIQDQVMCL---AALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVT 190
+VVSPLLSLIQDQV L + GIP L+S T +K IY L++ +K+LYVT
Sbjct: 211 TIVVSPLLSLIQDQVTQLIQNPSAGIPTAYLSSQTGIALKKTIYAELKRPRPSIKLLYVT 270
Query: 191 PEKI-SKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
E+I S + FMS L H L+ IDEAHC SQWGHDFRPDY LG+LKT FP +P
Sbjct: 271 AERIGSVAADFMSLLHDLHQKKMLARFVIDEAHCISQWGHDFRPDYSKLGVLKTAFPSIP 330
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSS----VGKVVIDEI- 304
++ALTATA + V +++ LHI + + NR NL + V EK S K ++ +
Sbjct: 331 ILALTATAAENVVRHVLKSLHINDALVLRTGFNRSNLLFEVHEKPSGDIEARKHLLALLT 390
Query: 305 -------AKYIQESYPN-SESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREK 356
A + ++S+ + SGIVYC +R ECE VA L GISAD+YH R+
Sbjct: 391 CRFGYRKATWTEDSFSSEGPSGIVYCMTRDECEDVANFLFDHGISADFYHGGQSKTDRQL 450
Query: 357 VHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECL 416
V W + ++++ T+A+GMGINK DVRFVIH+SL+KS+E YYQE+GRAGRD PS C+
Sbjct: 451 VQQAWQRGHVRIVCATIAYGMGINKADVRFVIHYSLAKSIEGYYQEAGRAGRDSQPSHCI 510
Query: 417 LFFRPAD---------VPRQSSMVFYENSGLQNLYDIVRYSQ 449
+ F D +P+++ L+NL ++V Y Q
Sbjct: 511 VLFNDNDGYRLRRILSIPQKNMTRQTRALHLKNLKEVVLYCQ 552
>gi|387120628|ref|YP_006286511.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429733941|ref|ZP_19267991.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans Y4]
gi|385875120|gb|AFI86679.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429153932|gb|EKX96695.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans Y4]
Length = 629
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 234/340 (68%), Gaps = 15/340 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQEIINAVL+G+D LVIMA G GKSLCYQ+PA+ +G LVVSPL+SL+
Sbjct: 37 SVFGYQSFRKGQQEIINAVLNGQDCLVIMATGTGKSLCYQIPALCFDGTTLVVSPLISLM 96
Query: 145 QDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L A G+ A L ST T +E ++ +A+ G+LK+LY++PEK+ S F
Sbjct: 97 KDQVDQLRANGVAADYLNSTQTFEEQQQVQNRAIS---GQLKLLYLSPEKVMTSS-FFQF 152
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+VP+MALTATA Q Q
Sbjct: 153 ISLC----QVSFIAIDEAHCISQWGHDFRPEYTQLGGLKGSFPNVPIMALTATADQTTQQ 208
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D+++ L + + +V + +RPN+ Y + EK ++++ +++ +SGIVYC
Sbjct: 209 DILQNLRLNRPHFYVGSFDRPNIRYTLVEKFKP----MEQLCRFVLAQ--KGKSGIVYCN 262
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SR + E++A+ L +G+ A YHA M+ REKV + ++ +QV+V T+AFGMGINK +
Sbjct: 263 SRNKVERIAETLYNKGVRAAAYHAGMENGLREKVQRDFQRDNIQVVVATIAFGMGINKSN 322
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 323 VRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 362
>gi|384487467|gb|EIE79647.1| hypothetical protein RO3G_04352 [Rhizopus delemar RA 99-880]
Length = 692
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 295/547 (53%), Gaps = 47/547 (8%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR- 130
TF W F + +R NQ E IN L+G DV V+M GGGKSLCYQLPA+++
Sbjct: 145 TFPWSRDVKKALTQNFKLSEFRPNQLEAINTTLNGDDVFVLMPTGGGKSLCYQLPAIIQR 204
Query: 131 ---EGIALVVSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKM 186
+G+ VVSPLLSL+QDQV L GI A ML S+ + E +K+IY L + L++
Sbjct: 205 YKTQGVTFVVSPLLSLMQDQVEQLVKGRGIAAGMLNSSVTAEQKKWIYNNLYQDTPTLQL 264
Query: 187 LYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFP 246
LY+TPE +SKS + + ++ H +L+ IDEAHC SQWGHDFRPDYK LG L+ +P
Sbjct: 265 LYITPELMSKSDQLRNVMDSLHRRNKLARFVIDEAHCVSQWGHDFRPDYKQLGSLRNIYP 324
Query: 247 DVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAK 306
+VP+MALTATA VQ D++ L + ++ IN +
Sbjct: 325 NVPIMALTATANDAVQKDVIHNLKRKGKRNHLADIN-----------------------E 361
Query: 307 YIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNK 365
+I++ Y +ESGI+YC SRK+CEQVA+ LR G+S +YH M + R +V W K
Sbjct: 362 FIKQHY--TESGIIYCISRKDCEQVAEALRTTYGVSTKHYHGKMTSSERSEVQSEWQTGK 419
Query: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVP 425
++VIV T+AFGMGI+KPDVR+V+H S+ S+E YYQE+GRAGRDGLP+ C L++ +D+
Sbjct: 420 IRVIVATIAFGMGIDKPDVRYVVHFSMPSSLEGYYQETGRAGRDGLPAICRLYYSFSDMR 479
Query: 426 RQSSMVFYENSGLQ-------NLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVL 478
+ ++ Q NL ++RY +++ E+ + M
Sbjct: 480 THNFLIDQGEGSWQQKQRQRDNLNTMMRYCDNKADCRRKQILSYFGERFNPAHCQKMCDN 539
Query: 479 AGHAQCIISLLQDIQDNNQRLT-MLQLVDKMKIKLKEIDSDLKREEIEQLVLQLIIDRVL 537
Q S L+++ Q++ +LQ + +I L ++ + ++++ II+
Sbjct: 540 CVANQHSTSFLKNMSTEAQQMARLLQQIHPDRITLSQLGDVFRGSKLKR-----IIEHQY 594
Query: 538 VRIGPFSPGKKIIKLEISSVQKN-TADNKKSTKRSLTSSALEFELDELRKELASISGGIL 596
++ + GK I K+++ + K AD+ + K S+ + S+ G
Sbjct: 595 DQLQGYGAGKSISKIDVDRLLKAMVADDIIAVKSECNSAGFPVSFVVTSSKFESLLRG-- 652
Query: 597 PHSVLSS 603
H+VL S
Sbjct: 653 NHTVLLS 659
>gi|261493662|ref|ZP_05990181.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261310662|gb|EEY11846.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 599
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/349 (47%), Positives = 236/349 (67%), Gaps = 15/349 (4%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
++ A V N+FG +R Q+E+INAVL RD LVIM GGGKSLCYQ+PA+ +GI L
Sbjct: 2 NTTAISVLNNIFGYQKFRDGQEEVINAVLENRDCLVIMTTGGGKSLCYQVPALCLDGITL 61
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKI 194
V+SPL+SL++DQV L GI A L ST + E+++F+ KAL G+LK+LY++PEK+
Sbjct: 62 VISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQFVEQKALS---GQLKLLYLSPEKV 118
Query: 195 SKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALT 254
++ F + C ++S I++DEAHC SQWGHDFRP+Y LG L+ FP+VP+MALT
Sbjct: 119 -MTQGFFHFISLC----KISFIAVDEAHCVSQWGHDFRPEYTLLGGLRNTFPNVPLMALT 173
Query: 255 ATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPN 314
ATA ++D++ L + ++ + +RPN+ Y V+EK + +I I+K
Sbjct: 174 ATADPTTRSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKPLEQLIKLISK------QQ 227
Query: 315 SESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
+SGIVYC SRK+ E++ ++L R IS YHA M RE+V + ++ +Q++V T+A
Sbjct: 228 GKSGIVYCNSRKKVEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQRDDIQIVVATIA 287
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
FGMGINK +VRFV+H L +S+E+YYQE+GRAGRD LPSE +LF+ P+D
Sbjct: 288 FGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPSD 336
>gi|418465350|ref|ZP_13036287.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359756282|gb|EHK90441.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 629
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/348 (48%), Positives = 237/348 (68%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+ A V +VFG ++R QQEIINAVL+G+D LVIMA G GKSLCYQ+PA+ +G LV
Sbjct: 29 ASASHVLHSVFGYQSFRKGQQEIINAVLNGQDCLVIMATGTGKSLCYQIPALCFDGTTLV 88
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VSPL+SL++DQV L A G+ A L ST T +E ++ +A+ G+LK+LY++PEK+
Sbjct: 89 VSPLISLMKDQVDQLRANGVAADYLNSTQTFEEQQQVQNRAIS---GQLKLLYLSPEKVM 145
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
S F + C ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+VP+MALTA
Sbjct: 146 TSS-FFQFISLC----QVSFIAIDEAHCISQWGHDFRPEYTQLGGLKGSFPNVPIMALTA 200
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA Q Q D+++ L + + +V + +RPN+ Y + EK ++++ +++
Sbjct: 201 TADQTTQQDILQNLRLNRPHFYVGSFDRPNIRYTLVEKFKP----MEQLCRFVLAQ--KG 254
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SR + E++A+ L +G+ A YHA M+ REKV + ++ +QV+V T+AF
Sbjct: 255 KSGIVYCNSRNKVERIAETLCNKGVRAAAYHAGMENGLREKVQRDFQRDNIQVVVATIAF 314
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 315 GMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 362
>gi|229524849|ref|ZP_04414254.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae bv. albensis
VL426]
gi|229338430|gb|EEO03447.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae bv. albensis
VL426]
Length = 620
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|123440598|ref|YP_001004592.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087559|emb|CAL10340.1| ATP-dependent DNA helicase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 616
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/346 (45%), Positives = 238/346 (68%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQEIINA LSG+D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L H R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FP++P++ALTATA
Sbjct: 131 -FLDQL----HQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPNLPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L++ + + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 EATRGDIVRLLNLDQPLIQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADM 345
>gi|449454038|ref|XP_004144763.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/365 (44%), Positives = 234/365 (64%), Gaps = 10/365 (2%)
Query: 72 TFEWDSRADDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+E DD L +FG A+R Q E A S +D ++M GGGKSLCYQLPA
Sbjct: 178 TYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPAT 237
Query: 129 LREGIALVVSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ G+ +V+SPLLSLIQDQ++ L GIP+ L S + + + L + + K+L
Sbjct: 238 VQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLL 297
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPE+I+ ++ F+ L H +L+ +DEAHC SQWGHDFRPDY+NLG LK FPD
Sbjct: 298 YVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPD 356
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP+MALTATAT V+ D+++ L I + + +RPNL Y V K+ K + ++ ++
Sbjct: 357 VPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT---KEPLVQLGQF 413
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKL 366
I+E + N + GIVYC S+ EC +V++ L ++ I A YYHA + R V +W +
Sbjct: 414 IKERFKN-QCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLVQKKWHVGDI 472
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
Q++ T+AFGMGI+KPDVRFVIH+++SKS+E+YYQESGRAGRDG P+ C++ ++ D R
Sbjct: 473 QIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSR 532
Query: 427 QSSMV 431
M+
Sbjct: 533 VVCML 537
>gi|429888125|ref|ZP_19369618.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae PS15]
gi|429224784|gb|EKY31102.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae PS15]
Length = 620
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLTREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|153216100|ref|ZP_01950274.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 1587]
gi|124114476|gb|EAY33296.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 1587]
Length = 620
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|332159828|ref|YP_004296405.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310846|ref|YP_006006902.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418243645|ref|ZP_12870111.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420261107|ref|ZP_14763764.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433548693|ref|ZP_20504742.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica IP 10393]
gi|318607629|emb|CBY29127.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664058|gb|ADZ40702.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862578|emb|CBX72731.1| ATP-dependent DNA helicase recQ [Yersinia enterocolitica W22703]
gi|351776862|gb|EHB19136.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404511396|gb|EKA25274.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431790342|emb|CCO67782.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica IP 10393]
Length = 616
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/346 (45%), Positives = 238/346 (68%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQEIINA LSG+D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L H R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FP++P++ALTATA
Sbjct: 131 -FLDQL----HQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPNLPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L++ + + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 EATRGDIVRLLNLDQPLIQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADM 345
>gi|424589454|ref|ZP_18028911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1037(10)]
gi|408037483|gb|EKG73878.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1037(10)]
Length = 611
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 23 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 83 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 140 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 196 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 348
>gi|254226334|ref|ZP_04919924.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V51]
gi|125621139|gb|EAZ49483.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V51]
Length = 620
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|374334314|ref|YP_005091001.1| ATP-dependent DNA helicase RecQ [Oceanimonas sp. GK1]
gi|372984001|gb|AEY00251.1| ATP-dependent DNA helicase RecQ [Oceanimonas sp. GK1]
Length = 608
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/351 (46%), Positives = 237/351 (67%), Gaps = 15/351 (4%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q EI+ A ++GRD +VIM GGGKSLCYQ+PA+LR G+ +VVSPL+SL++
Sbjct: 24 VFGYQDFRDGQLEIVEAAVAGRDAMVIMPTGGGKSLCYQIPALLRPGLTVVVSPLISLMK 83
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + S+ S++ + AL +GE +K+LYV+PE++ + + FM +L
Sbjct: 84 DQVDTLVANGVAAAYINSSLSRDTMLRHFTALRRGE--IKLLYVSPERLLQHE-FMERLG 140
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ L L +IDEAHC SQWGHDFRP+Y LG LK FP +P+MALTATA + + D+
Sbjct: 141 ELE----LGLFAIDEAHCISQWGHDFRPEYAELGRLKQWFPHIPVMALTATADEATRQDM 196
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L++ + +++ +RPN+ Y + EK +D++ +Y+ E N + GIVYC SR
Sbjct: 197 LGRLNLTAPLIHIASFDRPNIRYTLVEKFKG----LDQLVRYVAEQ--NGQCGIVYCSSR 250
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K E+VA+ L +G A YHA + + R+ V R+ ++ L ++V TVAFGMGI+KP+VR
Sbjct: 251 KRVEEVAERLLAKGHRAASYHAGLPLELRQSVQERFIRDDLDIVVATVAFGMGIDKPNVR 310
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS 436
+V+H+ + K++E+YYQE+GR GRDGLPSE LL + P DV R ++ ENS
Sbjct: 311 YVVHYDIPKNIESYYQETGRGGRDGLPSEALLLYDPGDVGRVRRLL--ENS 359
>gi|121587570|ref|ZP_01677336.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 2740-80]
gi|121728001|ref|ZP_01681040.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V52]
gi|153800796|ref|ZP_01955382.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-3]
gi|153818546|ref|ZP_01971213.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae NCTC 8457]
gi|153821590|ref|ZP_01974257.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|153825932|ref|ZP_01978599.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-2]
gi|227080417|ref|YP_002808968.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae M66-2]
gi|229507002|ref|ZP_04396510.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BX 330286]
gi|229509372|ref|ZP_04398855.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|229512489|ref|ZP_04401961.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TMA 21]
gi|229516319|ref|ZP_04405767.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC9]
gi|229606510|ref|YP_002877158.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MJ-1236]
gi|254851325|ref|ZP_05240675.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MO10]
gi|255744009|ref|ZP_05417963.1| ATP-dependent DNA helicase RecQ [Vibrio cholera CIRS 101]
gi|262153632|ref|ZP_06028759.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae INDRE 91/1]
gi|360036832|ref|YP_004938595.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str.
2010EL-1786]
gi|440712130|ref|ZP_20892755.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 4260B]
gi|449054605|ref|ZP_21733273.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. Inaba
G4222]
gi|9654602|gb|AAF93372.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548208|gb|EAX58278.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 2740-80]
gi|121629704|gb|EAX62123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V52]
gi|124123627|gb|EAY42370.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-3]
gi|126510885|gb|EAZ73479.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae NCTC 8457]
gi|126520877|gb|EAZ78100.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|149740340|gb|EDM54476.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-2]
gi|227008305|gb|ACP04517.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae M66-2]
gi|229346745|gb|EEO11715.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC9]
gi|229350488|gb|EEO15436.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TMA 21]
gi|229353687|gb|EEO18624.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|229356107|gb|EEO21026.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BX 330286]
gi|229369165|gb|ACQ59588.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MJ-1236]
gi|254847030|gb|EET25444.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MO10]
gi|255738274|gb|EET93665.1| ATP-dependent DNA helicase RecQ [Vibrio cholera CIRS 101]
gi|262030573|gb|EEY49210.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae INDRE 91/1]
gi|356647986|gb|AET28041.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str.
2010EL-1786]
gi|439972140|gb|ELP48437.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 4260B]
gi|448265751|gb|EMB02984.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. Inaba
G4222]
Length = 620
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|422305600|ref|ZP_16392796.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1035(8)]
gi|408628475|gb|EKL01222.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1035(8)]
Length = 611
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 23 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 83 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 140 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 196 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCSNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 348
>gi|119943986|ref|YP_941666.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
gi|119862590|gb|ABM02067.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
Length = 602
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 240/353 (67%), Gaps = 13/353 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A + L+VFG +R Q+ IIN + GRD LV+M GGGKSLC+Q+PA+++ GI V+S
Sbjct: 9 AKQILLDVFGYNEFREGQELIINQLCEGRDALVVMPTGGGKSLCFQIPALVKPGICFVIS 68
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L S+ S + + + + G+LK++Y+ PE++ +
Sbjct: 69 PLISLMKDQVDALRACGVAAAYLNSSLSYQQQNQVLNDMH--SGQLKLVYMAPERLLRPD 126
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+S+L+ ++L +IDEAHC SQWGHDFRP+Y LG LK +FPD+P++ALTATA
Sbjct: 127 -FLSRLDNLP----INLFAIDEAHCISQWGHDFRPEYALLGQLKQRFPDIPLVALTATAD 181
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
Q D++ L + + + +RPN+ Y++ EK ++++A Y+ E +ESG
Sbjct: 182 YATQQDILARLQFNDPLIAIHSFDRPNIEYLLIEKYRP----LNQLANYLDEH--KNESG 235
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR+ E++A++LR +G+S YHA M I R+ V + K+K+ ++V TVAFGMG
Sbjct: 236 IIYCTSRRRTEELAEKLRVKGLSVRCYHAGMMIEERQSVQDLFIKDKVDIVVATVAFGMG 295
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
I+KP+VRFV+H+ + K++E+YYQE+GRAGRDGLP++ +LF+ PAD R SM+
Sbjct: 296 IDKPNVRFVVHYEIPKNIESYYQETGRAGRDGLPAQAMLFYDPADAGRVRSML 348
>gi|261867419|ref|YP_003255341.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|365967218|ref|YP_004948780.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|416074416|ref|ZP_11584505.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|416090811|ref|ZP_11588163.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|416103119|ref|ZP_11589174.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444337220|ref|ZP_21151227.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|444345652|ref|ZP_21153662.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|444348097|ref|ZP_21155856.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|261412751|gb|ACX82122.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348006870|gb|EGY47245.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|348008390|gb|EGY48666.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348009101|gb|EGY49290.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|365746131|gb|AEW77036.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443542609|gb|ELT52921.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|443547331|gb|ELT56848.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|443547710|gb|ELT57152.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 629
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 234/340 (68%), Gaps = 15/340 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQEIINAVL+G+D LVIMA G GKSLCYQ+PA+ +G LVVSPL+SL+
Sbjct: 37 SVFGYQSFRKGQQEIINAVLNGQDCLVIMATGTGKSLCYQIPALCFDGTTLVVSPLISLM 96
Query: 145 QDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L A G+ A L ST T +E ++ +A+ G+LK+LY++PEK+ S F
Sbjct: 97 KDQVDQLRANGVEADYLNSTQTFEEQQQVQNRAIS---GQLKLLYLSPEKVMTSS-FFQF 152
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+VP+MALTATA Q Q
Sbjct: 153 ISLC----QVSFIAIDEAHCISQWGHDFRPEYTQLGGLKGSFPNVPIMALTATADQTTQQ 208
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D+++ L + + +V + +RPN+ Y + EK ++++ +++ +SGIVYC
Sbjct: 209 DILQNLRLNRPHFYVGSFDRPNIRYTLVEKFKP----MEQLCRFVLAQ--KGKSGIVYCN 262
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SR + E++A+ L +G+ A YHA M+ REKV + ++ +QV+V T+AFGMGINK +
Sbjct: 263 SRNKVERIAETLYNKGVRAAAYHAGMENGLREKVQRDFQRDNIQVVVATIAFGMGINKSN 322
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 323 VRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 362
>gi|196228960|ref|ZP_03127826.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
gi|196227241|gb|EDY21745.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
Length = 610
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/346 (46%), Positives = 232/346 (67%), Gaps = 13/346 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG ++R Q+EII L+GRDV ++ GGGKSLC+QLPA+LR+G+ +VVSPL++L++
Sbjct: 14 TFGYDSFRPLQEEIITDALAGRDVFALLPTGGGKSLCFQLPALLRDGLTVVVSPLIALMK 73
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+PA L ST ++ + ++ L +GE ++LY PE++ F+ L
Sbjct: 74 DQVDALTATGVPATFLNSTLDGDEARARFRGLHRGE--FRLLYAAPERLMLPG-FVDNL- 129
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
A ++ I+IDEAHC S+WGHDFRP+Y+ L L+ PDVPMMALTATAT++V+ D+
Sbjct: 130 ---RAWNVTQIAIDEAHCISEWGHDFRPEYRQLADLRETLPDVPMMALTATATERVRADI 186
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +R + ++ NRPNL Y V ++ D++ +++ S P ESGI+YC SR
Sbjct: 187 IERLRLRDPRCYTASFNRPNLTYRVVPRAQP----YDQVLAFLR-SRPG-ESGIIYCSSR 240
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K E VA+ L ISA YHA + R + + +++++VI T+AFGMGINKP+VR
Sbjct: 241 KATESVAERLADDRISAKPYHAGLTAEERGRHQELFLRDEVRVICATIAFGMGINKPNVR 300
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
FV+H+ L K++E YYQE+GRAGRDGLP EC+L F ADV +Q+S +
Sbjct: 301 FVLHYDLPKNIEGYYQETGRAGRDGLPGECVLLFSAADVVKQTSFI 346
>gi|254291619|ref|ZP_04962408.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae AM-19226]
gi|150422476|gb|EDN14434.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae AM-19226]
Length = 620
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|411116551|ref|ZP_11389038.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
gi|410712654|gb|EKQ70155.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
Length = 741
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/342 (47%), Positives = 230/342 (67%), Gaps = 19/342 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R Q++II L +D+LV+M GGGKSLCYQLPA+L+ G+ +VVSPL++L+QD
Sbjct: 22 FGYDSFRPGQRQIIEKALQNQDLLVVMPTGGGKSLCYQLPALLKPGLTVVVSPLIALMQD 81
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV L GIPA L S+ S +E E+ I +GE+K++Y+ PE++ R
Sbjct: 82 QVQALQDNGIPATFLNSSLSGTELRERERAIL------DGEMKLVYIAPERLLNEGRLAG 135
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + + A I+IDEAHC S+WGHDFRP+Y+ L L+ F +VP+MALTATAT++V+
Sbjct: 136 WLSQVYVAA----IAIDEAHCVSEWGHDFRPEYRQLSQLRQWFANVPIMALTATATERVR 191
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D++E L+++ + VST NRPNL+Y VR K K E+ + I++ SGI+YC
Sbjct: 192 YDIIEQLNLQDPVLHVSTFNRPNLYYEVRPKH---KQSYRELLQLIRQQ--AGASGIIYC 246
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK +++ +L++ GISA YHA MD R + R+ ++ +QV+V T+AFGMGINKP
Sbjct: 247 LSRKRVDELTTKLQRDGISALPYHAGMDNQLRSENQSRFIRDNVQVMVATIAFGMGINKP 306
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFV+H+ L +++E YYQESGRAGRDG P+ C LFF DV
Sbjct: 307 DVRFVVHYDLPRNIEGYYQESGRAGRDGEPARCTLFFSMGDV 348
>gi|365833970|ref|ZP_09375421.1| ATP-dependent DNA helicase RecQ [Hafnia alvei ATCC 51873]
gi|364570619|gb|EHM48223.1| ATP-dependent DNA helicase RecQ [Hafnia alvei ATCC 51873]
Length = 612
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 231/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA ++GRD LV+M GGGKSLCYQ+PA++ EG+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQTIINAAIAGRDCLVVMPTGGGKSLCYQIPALVMEGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E ++ +Y G +K+LY+ PE++
Sbjct: 73 PLISLMKDQVDQLQANGVSAACLNSTQNREQQQEVYAGCRSGA--IKLLYIAPERLMMDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L + A L+++DEAHC SQWGHDFRP+Y LG++K +FPD+P++ALTATA
Sbjct: 131 -FLDQLPHWNPA----LLAVDEAHCISQWGHDFRPEYSALGLIKQRFPDIPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ND+ +L + + VS+ +RPN+ Y + EK +D++ +++QE +SG
Sbjct: 186 DATRNDIERLLSLNDPLVQVSSFDRPNIRYTLIEKFKP----LDQLIRFVQEQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG S YHA +D R V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTTARLQSRGFSVGAYHAGLDHEHRSSVQDAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIEAYYQETGRAGRDGLPAEAVLLYDPADM 345
>gi|292486686|ref|YP_003529556.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora CFBP1430]
gi|292897923|ref|YP_003537292.1| ATP-dependent DNA helicase [Erwinia amylovora ATCC 49946]
gi|428783612|ref|ZP_19001107.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora ACW56400]
gi|291197771|emb|CBJ44866.1| ATP-dependent DNA helicase [Erwinia amylovora ATCC 49946]
gi|291552103|emb|CBA19140.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora CFBP1430]
gi|312170752|emb|CBX79014.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora ATCC BAA-2158]
gi|426277898|gb|EKV55621.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora ACW56400]
Length = 610
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/346 (45%), Positives = 233/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
AD V + FG +R QQ II L+GRD LV+M GGGKSLCYQ+PA++R+G+ LVVS
Sbjct: 13 ADQVLRDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E+++ + G+ +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSGK--VRLLYIAPERLMMDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L C+ A ++++DEAHC SQWGHDFRP+Y LG L+ + PDVP+MALTATA
Sbjct: 131 -FLEQLTHCNPA----MLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +ND+ +L + + +S+ +RPN+ Y + EK +++ +Y+Q+ + G
Sbjct: 186 ETTRNDIARLLQLNDPLIQISSFDRPNIRYTLVEKFKP----TEQLLRYVQDQ--RGKCG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA MD R +V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNAHRAQVQEAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E LL + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADM 345
>gi|432566205|ref|ZP_19802760.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE51]
gi|431089461|gb|ELD95275.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE51]
Length = 611
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/349 (46%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFVIH + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVIHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|429091857|ref|ZP_19154510.1| ATP-dependent DNA helicase RecQ [Cronobacter dublinensis 1210]
gi|429099036|ref|ZP_19161142.1| ATP-dependent DNA helicase RecQ [Cronobacter dublinensis 582]
gi|426285376|emb|CCJ87255.1| ATP-dependent DNA helicase RecQ [Cronobacter dublinensis 582]
gi|426743518|emb|CCJ80623.1| ATP-dependent DNA helicase RecQ [Cronobacter dublinensis 1210]
Length = 609
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 236/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 6 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 65
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S+++++ + G+ +++LY+ P
Sbjct: 66 GLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRSGQ--VRLLYIAP 123
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP M
Sbjct: 124 ERLMMDN-FIDSLSYWN----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFM 178
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 179 ALTATADDTTRRDIVRLLGLEDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 234
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 235 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 292
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|357155794|ref|XP_003577240.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Brachypodium
distachyon]
Length = 599
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/365 (45%), Positives = 229/365 (62%), Gaps = 9/365 (2%)
Query: 72 TFEWDSRADDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
++E S DD+ L +FG ++R Q E +A L+ RD ++M GGGKSLCYQLPA
Sbjct: 175 SYEQLSCLDDLNLANAVIFGNKSFRPLQYEACSAALNNRDCFILMPTGGGKSLCYQLPAT 234
Query: 129 LREGIALVVSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
L G+ +VV PLLSLIQDQV+ L GI A L S + + + L G K+L
Sbjct: 235 LHPGVTVVVCPLLSLIQDQVVALTFKFGIQASFLNSQQTSSQASVVMQELRNGTPSFKLL 294
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPE++ + FM L H G L+ IDEAHC SQWGHDFRPDY+ LG LK FP
Sbjct: 295 YVTPERMVGNYSFMEILRGLHQRGLLARFVIDEAHCVSQWGHDFRPDYRALGCLKQNFPR 354
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP+MALTATAT+ V+ D++ L + + + +R NL YMV K+ ++ + E+
Sbjct: 355 VPIMALTATATEAVRKDILSTLRVPNALVLKRSFDRLNLNYMVIGKTKTPQMQLGEL--- 411
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKL 366
++E + N SGIVYC S+ EC A+ LR++ I +YHA + R V +W + ++
Sbjct: 412 LKERFMNM-SGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAARQRTSVQEKWHRGEV 470
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
+VI T+AFGMGI+KPDVRFVIH++LSKS+E+YYQESGRAGRD LP+ C++ ++ D R
Sbjct: 471 KVICATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDDLPAHCVVLYQKKDFSR 530
Query: 427 QSSMV 431
M+
Sbjct: 531 IVCML 535
>gi|161582034|ref|NP_229853.2| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|379740087|ref|YP_005332056.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae IEC224]
gi|417811271|ref|ZP_12457937.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-49A2]
gi|417815025|ref|ZP_12461666.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HCUF01]
gi|417822345|ref|ZP_12468945.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE48]
gi|418330899|ref|ZP_12941859.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-06A1]
gi|418335866|ref|ZP_12944769.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-23A1]
gi|418342438|ref|ZP_12949250.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-28A1]
gi|418347611|ref|ZP_12952349.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43A1]
gi|418353167|ref|ZP_12955894.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A1]
gi|419824659|ref|ZP_14348170.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1033(6)]
gi|421315437|ref|ZP_15766011.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1032(5)]
gi|421318988|ref|ZP_15769550.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1038(11)]
gi|421323026|ref|ZP_15773559.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1041(14)]
gi|421326494|ref|ZP_15777013.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1042(15)]
gi|421330426|ref|ZP_15780911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1046(19)]
gi|421334020|ref|ZP_15784493.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1048(21)]
gi|421337925|ref|ZP_15788367.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-20A2]
gi|421345358|ref|ZP_15795746.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46A1]
gi|421350031|ref|ZP_15800399.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-25]
gi|422890228|ref|ZP_16932668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-40A1]
gi|422901023|ref|ZP_16936417.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48A1]
gi|422905194|ref|ZP_16940063.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-70A1]
gi|422911938|ref|ZP_16946476.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HFU-02]
gi|422921444|ref|ZP_16954674.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BJG-01]
gi|422924406|ref|ZP_16957463.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-38A1]
gi|423143466|ref|ZP_17131092.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-19A1]
gi|423148448|ref|ZP_17135818.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-21A1]
gi|423152234|ref|ZP_17139456.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-22A1]
gi|423155026|ref|ZP_17142169.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-32A1]
gi|423158891|ref|ZP_17145869.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-33A2]
gi|423163555|ref|ZP_17150362.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48B2]
gi|423729565|ref|ZP_17702898.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A1]
gi|423745963|ref|ZP_17711086.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A2]
gi|423890179|ref|ZP_17725115.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62A1]
gi|423924715|ref|ZP_17729728.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-77A1]
gi|424000739|ref|ZP_17743841.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A2]
gi|424004900|ref|ZP_17747897.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-37A1]
gi|424022697|ref|ZP_17762372.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62B1]
gi|424025715|ref|ZP_17765344.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-69A1]
gi|424585089|ref|ZP_18024695.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1030(3)]
gi|424593717|ref|ZP_18033068.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1040(13)]
gi|424597647|ref|ZP_18036858.1| ATP-dependent DNA helicase RecQ [Vibrio Cholerae CP1044(17)]
gi|424600419|ref|ZP_18039587.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1047(20)]
gi|424605327|ref|ZP_18044303.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1050(23)]
gi|424609045|ref|ZP_18047916.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-39A1]
gi|424611960|ref|ZP_18050779.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41A1]
gi|424615844|ref|ZP_18054548.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-42A1]
gi|424620598|ref|ZP_18059135.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-47A1]
gi|424643415|ref|ZP_18081182.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A2]
gi|424651343|ref|ZP_18088878.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A2]
gi|424655296|ref|ZP_18092607.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A2]
gi|443502247|ref|ZP_21069249.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-64A1]
gi|443506147|ref|ZP_21072955.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-65A1]
gi|443509985|ref|ZP_21076668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-67A1]
gi|443513827|ref|ZP_21080381.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-68A1]
gi|443517631|ref|ZP_21084066.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-71A1]
gi|443522220|ref|ZP_21088479.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-72A2]
gi|443529152|ref|ZP_21095173.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-7A1]
gi|443533890|ref|ZP_21099822.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-80A1]
gi|443540108|ref|ZP_21105959.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A1]
gi|340045414|gb|EGR06357.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HCUF01]
gi|340045971|gb|EGR06907.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-49A2]
gi|340049588|gb|EGR10502.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE48]
gi|341626483|gb|EGS51872.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-70A1]
gi|341628175|gb|EGS53450.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48A1]
gi|341628480|gb|EGS53726.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-40A1]
gi|341641806|gb|EGS66325.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HFU-02]
gi|341648893|gb|EGS72908.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BJG-01]
gi|341649090|gb|EGS73091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-38A1]
gi|356422714|gb|EHH76185.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-06A1]
gi|356423432|gb|EHH76883.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-21A1]
gi|356427543|gb|EHH80791.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-19A1]
gi|356434248|gb|EHH87429.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-23A1]
gi|356435779|gb|EHH88928.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-22A1]
gi|356438558|gb|EHH91573.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-28A1]
gi|356444285|gb|EHH97096.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-32A1]
gi|356448332|gb|EHI01104.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43A1]
gi|356451141|gb|EHI03843.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-33A2]
gi|356455360|gb|EHI08003.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A1]
gi|356456752|gb|EHI09337.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48B2]
gi|378793597|gb|AFC57068.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae IEC224]
gi|395922926|gb|EJH33739.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1032(5)]
gi|395924346|gb|EJH35149.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1041(14)]
gi|395926264|gb|EJH37052.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1038(11)]
gi|395934825|gb|EJH45562.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1042(15)]
gi|395936113|gb|EJH46842.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1046(19)]
gi|395938083|gb|EJH48781.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1048(21)]
gi|395947099|gb|EJH57756.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-20A2]
gi|395948728|gb|EJH59366.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46A1]
gi|395955138|gb|EJH65741.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-25]
gi|395964752|gb|EJH74949.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A2]
gi|395964962|gb|EJH75150.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A2]
gi|395967722|gb|EJH77772.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-42A1]
gi|395976765|gb|EJH86206.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-47A1]
gi|395979404|gb|EJH88755.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1030(3)]
gi|395979993|gb|EJH89302.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1047(20)]
gi|408011183|gb|EKG49013.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-39A1]
gi|408018033|gb|EKG55503.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41A1]
gi|408038249|gb|EKG74601.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1040(13)]
gi|408045701|gb|EKG81507.1| ATP-dependent DNA helicase RecQ [Vibrio Cholerae CP1044(17)]
gi|408047549|gb|EKG83162.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1050(23)]
gi|408058109|gb|EKG92929.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A2]
gi|408612488|gb|EKK85827.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1033(6)]
gi|408628389|gb|EKL01142.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A1]
gi|408644451|gb|EKL16136.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A2]
gi|408659856|gb|EKL30889.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-77A1]
gi|408660756|gb|EKL31758.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62A1]
gi|408850061|gb|EKL90047.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-37A1]
gi|408850390|gb|EKL90354.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A2]
gi|408875954|gb|EKM15091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62B1]
gi|408882282|gb|EKM21122.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-69A1]
gi|443433407|gb|ELS75915.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-64A1]
gi|443437237|gb|ELS83336.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-65A1]
gi|443441070|gb|ELS90740.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-67A1]
gi|443444882|gb|ELS98141.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-68A1]
gi|443448736|gb|ELT05353.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-71A1]
gi|443451781|gb|ELT12026.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-72A2]
gi|443459995|gb|ELT27385.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-7A1]
gi|443462939|gb|ELT33958.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-80A1]
gi|443464395|gb|ELT39058.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A1]
Length = 611
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 23 VFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 83 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 140 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 196 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 348
>gi|348679514|gb|EGZ19330.1| hypothetical protein PHYSODRAFT_491373 [Phytophthora sojae]
Length = 400
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/375 (44%), Positives = 225/375 (60%), Gaps = 21/375 (5%)
Query: 104 LSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCL---AALGIPAHM 160
+ G D V+M GGGKSLCYQLPAVL G+ +VVSPLLSLIQDQV L GIPA
Sbjct: 1 MRGEDCFVLMPTGGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAF 60
Query: 161 LTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDE 220
LTS T+ ++ I L + LK+LY+TPEKI KS L+ + L+ IDE
Sbjct: 61 LTSQTALTLKRSITAELRRPVPSLKLLYLTPEKIVKSAEMADLLQTLYRNKMLARFVIDE 120
Query: 221 AHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVST 280
AHC SQWGHDFRP+Y LG+LK FP+VP+MALTATA KV + L I F +
Sbjct: 121 AHCVSQWGHDFRPEYSQLGMLKKTFPNVPLMALTATAPPKVIQGVQRSLKISNGPVFSMS 180
Query: 281 INRPNLFYMVREKSSVGKV-VIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG 339
NR NL + VR+K V ++ + + I ++YP GIVYC ++++ E VA L RG
Sbjct: 181 FNRQNLTFEVRDKPLGSDVKAMEALYELISKTYPRDAVGIVYCMTKQDSEDVANYLFDRG 240
Query: 340 ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETY 399
+SAD+YHA R V W +L ++ T+A+GMGINKPDVR+VIH S++KS+E Y
Sbjct: 241 LSADFYHAGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGY 300
Query: 400 YQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKV 459
YQE+GRAGRDG PS+C++F+ D+ + S++F G+ ++
Sbjct: 301 YQEAGRAGRDGKPSQCIIFYSARDISKMRSILFMPQKGM-----------------TKQT 343
Query: 460 RLVIFEKLQQVNLFC 474
R V EKL+ + +C
Sbjct: 344 RAVHMEKLRAMAEYC 358
>gi|417792738|ref|ZP_12440060.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii E899]
gi|429117792|ref|ZP_19178710.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 701]
gi|449309964|ref|YP_007442320.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii SP291]
gi|333953169|gb|EGL71149.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii E899]
gi|426320921|emb|CCK04823.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 701]
gi|449099997|gb|AGE88031.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii SP291]
Length = 609
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 235/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 6 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 65
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S+E+++ + G+ +++LY+ P
Sbjct: 66 GLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSREEQQAVMAGCRTGQ--VRLLYIAP 123
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP M
Sbjct: 124 ERLMMDN-FIDTLGYWD----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFM 178
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 179 ALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 234
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 235 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 292
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|156935855|ref|YP_001439771.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii ATCC
BAA-894]
gi|424801979|ref|ZP_18227521.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 696]
gi|429119492|ref|ZP_19180209.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 680]
gi|156534109|gb|ABU78935.1| hypothetical protein ESA_03738 [Cronobacter sakazakii ATCC BAA-894]
gi|423237700|emb|CCK09391.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 696]
gi|426326019|emb|CCK10946.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 680]
Length = 609
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 235/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 6 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 65
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S+E+++ + G+ +++LY+ P
Sbjct: 66 GLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSREEQQAVLAGCRTGQ--VRLLYIAP 123
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP M
Sbjct: 124 ERLMMDN-FIDTLGYWD----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFM 178
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 179 ALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 234
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 235 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 292
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|389842669|ref|YP_006344753.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii ES15]
gi|387853145|gb|AFK01243.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii ES15]
Length = 609
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 235/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 6 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 65
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S+E+++ + G+ +++LY+ P
Sbjct: 66 GLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSREEQQAVLAGCRTGQ--VRLLYIAP 123
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP M
Sbjct: 124 ERLMMDN-FIDTLGYWD----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFM 178
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 179 ALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 234
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 235 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 292
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|260949491|ref|XP_002619042.1| hypothetical protein CLUG_00201 [Clavispora lusitaniae ATCC 42720]
gi|238846614|gb|EEQ36078.1| hypothetical protein CLUG_00201 [Clavispora lusitaniae ATCC 42720]
Length = 1408
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 225/348 (64%), Gaps = 10/348 (2%)
Query: 81 DVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALV 136
DV NVF +P +R NQ E + A L+G+DV V++ GGGKSLCYQLPA+++ G+ +V
Sbjct: 662 DVLHNVFKLPDFRPNQLEAVVAALNGKDVFVLIPTGGGKSLCYQLPALVKGGKTRGVTIV 721
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
+SPL+SL+QDQV L I A M++S + E++ + L G+ L ++Y++PE ++
Sbjct: 722 ISPLISLMQDQVQHLRDRNINAAMISSRGTTEEKHAAIRELTSGQ--LDLVYLSPEMVNS 779
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
S L K + + L+ + +DEAHC S WGHDFRPDY+ + + K +FP+VP+MALTAT
Sbjct: 780 SNMIQRVLSKLYESNMLARVVVDEAHCVSSWGHDFRPDYQGMSLFKEKFPEVPIMALTAT 839
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A +KV+ D++ L ++ + + NR NLFY VR K + + I Y+ +
Sbjct: 840 ANEKVRLDIVHHLRMKNLVLLKQSFNRTNLFYEVRNKP---PNLYEWIRDYVMGKMA-GK 895
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
+GI+YC S++ CE AQ+L GI YYHA MD N R V +W NK+Q+I T+AFG
Sbjct: 896 TGIIYCHSKQSCETTAQKLNDWGIKCMYYHAGMDPNERFDVQTQWQHNKIQLICATIAFG 955
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
MGI+KPDVRFVIH + KS+E YYQE+GRAGRDG SEC++F+ D
Sbjct: 956 MGIDKPDVRFVIHMYIPKSLEGYYQETGRAGRDGKESECIMFYSYKDA 1003
>gi|151945893|gb|EDN64125.1| Nucleolar DNA helicase of the RecQ family involved in maintenance of
genome integrity [Saccharomyces cerevisiae YJM789]
Length = 1447
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 211/622 (33%), Positives = 329/622 (52%), Gaps = 120/622 (19%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGL--L 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC--------MV 476
+M+ Q ++ R ++ H N KLQQV +C +
Sbjct: 1010 RTMQTMI-------QKDKNLDRENKEK-HLN----------KLQQVMAYCDNVTDCRRKL 1051
Query: 477 VLA----------GHAQC----------------------IISLLQDIQDNNQRLTMLQL 504
VL+ H C I+ L++ IQ N+R+T++
Sbjct: 1052 VLSYFNEDFDSKLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQ--NERVTIIHC 1109
Query: 505 VDKMK--------------IKLKEIDSDLKREEIEQLVLQLIIDRVL------------- 537
D K ++ I +++ EIE++ LI RVL
Sbjct: 1110 QDVFKGSRSSKIVQANHDTLEEHGIGKSMQKSEIERIFFHLITIRVLQEYSIMNNSGFAS 1169
Query: 538 --VRIGPFS----PGKKIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASI 591
V++GP + GK IK++ + N+ + ST S S+ E + + ++ +I
Sbjct: 1170 SYVKVGPNAKKLLTGKMEIKMQFTISAPNS---RPSTSSSFQSN--EDNIPVIAQKSTTI 1224
Query: 592 SGGILPHSVLSSQLIRLISARK 613
G + ++ R ISA++
Sbjct: 1225 GGNV------AANPPRFISAKE 1240
>gi|47224193|emb|CAG13113.1| unnamed protein product [Tetraodon nigroviridis]
Length = 827
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 246/423 (58%), Gaps = 39/423 (9%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D V+M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 27 FGLHQFRFNQLEAINATLGGEDTFVLMPTGGGKSLCYQLPACVSPGVTVVISPLKSLIVD 86
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ L L IPA L+ + IY L + E +K+LYVTPEK+S S + +S L+
Sbjct: 87 QIQKLTTLDIPATSLSGDLGDREAGRIYMQLSRKEPIVKLLYVTPEKVSASNKLISALQN 146
Query: 207 CHHAGRLSLISIDEAHCCS--------------------------QWGHDFRPDYKNLGI 240
+ G L+ IDEAHC S QWGHDFRPDYK L
Sbjct: 147 LYERGLLARFVIDEAHCVSQVCFQVYTQSAECVQTFTFNPPTLILQWGHDFRPDYKKLHE 206
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
L+ +FP VPMMALTATAT +VQ D+ L++R+ F + NR NL Y V K K V
Sbjct: 207 LRKKFPQVPMMALTATATPRVQKDIHNQLNMRQPQVFTMSFNRTNLKYAVLPKKP--KKV 264
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMR 360
++ +I++ YP +SGI+YC SR +C+ +A+ L++ G+ A YHA + RE V +
Sbjct: 265 DEDCISWIKKHYPR-DSGIIYCLSRNDCDTMAESLQRAGLLALSYHAGLRDGEREYVQTK 323
Query: 361 W-SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
W +++ QVI T+AFGMGI+KPDVR+VIH SL KSVE YYQESGRAGRDG S+C+LF+
Sbjct: 324 WINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISQCILFY 383
Query: 420 RPADVPRQSSMVFYENSG--------LQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVN 471
DV R ++ + G NL+ +V + + + ++ L F +L+
Sbjct: 384 SYTDVHRIKRIISMDREGDGHTKATHYNNLHSMVHFCENAMECRRIQL-LAYFGELKFNR 442
Query: 472 LFC 474
FC
Sbjct: 443 SFC 445
>gi|6323844|ref|NP_013915.1| Sgs1p [Saccharomyces cerevisiae S288c]
gi|464912|sp|P35187.1|SGS1_YEAST RecName: Full=ATP-dependent helicase SGS1; AltName: Full=Helicase
TPS1
gi|349194|gb|AAA35167.1| bps. 390..881 = homology to E.coli recQ; bps. 414..430 = ATP binding
site [Saccharomyces cerevisiae]
gi|642282|emb|CAA87811.1| Tps1p [Saccharomyces cerevisiae]
gi|726279|gb|AAB60289.1| Sgs1p [Saccharomyces cerevisiae]
gi|285814193|tpg|DAA10088.1| TPA: Sgs1p [Saccharomyces cerevisiae S288c]
Length = 1447
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 238/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGL--L 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMV 431
+M+
Sbjct: 1010 RTMQTMI 1016
>gi|323336083|gb|EGA77356.1| Sgs1p [Saccharomyces cerevisiae Vin13]
Length = 1447
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 238/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGL--L 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMV 431
+M+
Sbjct: 1010 RTMQTMI 1016
>gi|190408415|gb|EDV11680.1| ATP-dependent helicase SGS1 [Saccharomyces cerevisiae RM11-1a]
Length = 1447
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 238/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGL--L 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMV 431
+M+
Sbjct: 1010 RTMQTMI 1016
>gi|349580478|dbj|GAA25638.1| K7_Sgs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1447
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 238/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGL--L 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMV 431
+M+
Sbjct: 1010 RTMQTMI 1016
>gi|425307629|ref|ZP_18697292.1| ATP-dependent DNA helicase RecQ [Escherichia coli N1]
gi|408224965|gb|EKI48662.1| ATP-dependent DNA helicase RecQ [Escherichia coli N1]
Length = 609
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|416333516|ref|ZP_11670743.1| ATP-dependent DNA helicase RecQ [Escherichia coli WV_060327]
gi|320197630|gb|EFW72242.1| ATP-dependent DNA helicase RecQ [Escherichia coli WV_060327]
Length = 609
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|392297356|gb|EIW08456.1| Sgs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1341
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 238/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 553 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 609
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 610 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGL--L 667
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 668 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 727
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 728 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 784
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 785 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 843
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 844 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 903
Query: 425 PRQSSMV 431
+M+
Sbjct: 904 RTMQTMI 910
>gi|417714622|ref|ZP_12363574.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-272]
gi|417719543|ref|ZP_12368424.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-227]
gi|332998230|gb|EGK17832.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-272]
gi|333013771|gb|EGK33134.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-227]
Length = 609
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|262163729|ref|ZP_06031469.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM223]
gi|262027709|gb|EEY46374.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM223]
Length = 620
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 236/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I+A L GRD LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIDAALQGRDSLVIMPTGGGKSLCYQIPALVCEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP++P+MALTATA ++D+
Sbjct: 149 NL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 357
>gi|416062304|ref|ZP_11581397.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|416069431|ref|ZP_11583273.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|347997266|gb|EGY38280.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348000045|gb|EGY40845.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 629
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 234/340 (68%), Gaps = 15/340 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQEIINAVL+G+D LVIMA G GKSLCYQ+PA+ +G LVVSPL+SL+
Sbjct: 37 SVFGYQSFRKGQQEIINAVLNGQDCLVIMATGTGKSLCYQIPALCFDGTTLVVSPLISLM 96
Query: 145 QDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L A G+ A L ST T +E ++ +A+ G+LK+LY++PEK+ S F
Sbjct: 97 KDQVDQLRANGVAADYLNSTQTFEEQQQVQNRAIS---GQLKLLYLSPEKVMTSS-FFQF 152
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+VP+MALTATA Q Q
Sbjct: 153 ISLC----QVSFIAIDEAHCISQWGHDFRPEYTQLGGLKGSFPNVPIMALTATADQTTQQ 208
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D+++ L + + +V + +RPN+ Y + EK ++++ +++ +SGIVYC
Sbjct: 209 DILQNLRLNRPHFYVGSFDRPNIRYTLVEKFKP----MEQLCRFVLAQ--KGKSGIVYCN 262
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SR + E++A+ L +G+ A YHA M+ REKV + ++ +QV+V T+AFGMGINK +
Sbjct: 263 SRNKVERIAETLCNKGVRAAAYHAGMENGLREKVQRDFQRDNIQVVVATIAFGMGINKSN 322
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 323 VRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 362
>gi|390436587|ref|ZP_10225125.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans IG1]
Length = 609
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 234/355 (65%), Gaps = 13/355 (3%)
Query: 70 SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
S ++ A V + FG +R QQ IIN LSGRD LV+M GGGKSLCYQ+PA++
Sbjct: 4 SAVLNQEALAQQVLQDTFGYQHFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALV 63
Query: 130 REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYV 189
REG+ LVVSPL+SL++DQV L A G+ A L ST ++E ++ + G +K+LY+
Sbjct: 64 REGLTLVVSPLISLMKDQVDQLLANGVAAAYLNSTMTREQQQTVMADCRTGR--VKLLYI 121
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
PE++ F+ L A ++++DEAHC SQWGHDFRP+Y LG ++ +FP++P
Sbjct: 122 APERLMMDN-FLDSLAHWQPA----MLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELP 176
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATA + +ND++ +LH++ + +S+ +RPN+ Y + EK D++ +Y+Q
Sbjct: 177 VMALTATADETTRNDIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKP----TDQLLRYVQ 232
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVI 369
+ + GI+YC SR + E A L+ RG S YHA +D R +V + ++ LQ++
Sbjct: 233 DQ--RGKCGIIYCNSRAKVEDTAARLQSRGFSVGAYHAGIDSEQRGRVQEAFQRDDLQIV 290
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 291 VATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|259148775|emb|CAY82020.1| Sgs1p [Saccharomyces cerevisiae EC1118]
Length = 1447
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 238/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGL--L 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMV 431
+M+
Sbjct: 1010 RTMQTMI 1016
>gi|323307639|gb|EGA60904.1| Sgs1p [Saccharomyces cerevisiae FostersO]
Length = 1396
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 238/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLF--INGLL 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMV 431
+M+
Sbjct: 1010 RTMQTMI 1016
>gi|256271606|gb|EEU06648.1| Sgs1p [Saccharomyces cerevisiae JAY291]
Length = 1447
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 238/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGL--L 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMV 431
+M+
Sbjct: 1010 RTMQTMI 1016
>gi|260846402|ref|YP_003224180.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H2 str.
12009]
gi|419302912|ref|ZP_13844902.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11C]
gi|419869038|ref|ZP_14391264.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H2 str.
CVM9450]
gi|257761549|dbj|BAI33046.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H2 str.
12009]
gi|378146097|gb|EHX07251.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11C]
gi|388343371|gb|EIL09335.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H2 str.
CVM9450]
Length = 609
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|218707455|ref|YP_002414974.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMN026]
gi|417588964|ref|ZP_12239725.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_C165-02]
gi|218434552|emb|CAR15481.1| ATP-dependent DNA helicase [Escherichia coli UMN026]
gi|345331100|gb|EGW63561.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_C165-02]
Length = 609
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|170769878|ref|ZP_02904331.1| ATP-dependent DNA helicase RecQ [Escherichia albertii TW07627]
gi|170121316|gb|EDS90247.1| ATP-dependent DNA helicase RecQ [Escherichia albertii TW07627]
Length = 611
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 232/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +VVS
Sbjct: 15 AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 74
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 75 PLISLMKDQVDQLQANGVAAACLNSTQTREQQLDVMTGCRTGQ--IRLLYIAPERLMLDN 132
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L + A L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTATA
Sbjct: 133 -FLEHLAHWNPA----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATAD 187
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SG
Sbjct: 188 DTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSG 241
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGISA YHA ++ + R V ++ ++ LQ++V TVAFGMG
Sbjct: 242 IIYCNSRAKVEDTAARLQSRGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMG 301
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 302 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|365763903|gb|EHN05429.1| Sgs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1314
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 238/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I A M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLF--INGLL 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMV 431
+M+
Sbjct: 1010 RTMQTMI 1016
>gi|432682606|ref|ZP_19917956.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE143]
gi|431216878|gb|ELF14470.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE143]
Length = 611
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKAEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|52426136|ref|YP_089273.1| RecQ protein [Mannheimia succiniciproducens MBEL55E]
gi|52308188|gb|AAU38688.1| RecQ protein [Mannheimia succiniciproducens MBEL55E]
Length = 637
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/348 (48%), Positives = 234/348 (67%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A DV +VFG +R QQE+I A LSGRD LV+MA G GKSLCYQ+PA+ G+ LV
Sbjct: 27 STALDVLHSVFGYQTFRKGQQEVIQAALSGRDSLVVMATGNGKSLCYQIPALCFAGLTLV 86
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY-KALEKGEGELKMLYVTPEKIS 195
+SPL+SL++DQV L A GI A L ST S E ++ + KA+ GELK+LY++PEK+
Sbjct: 87 ISPLISLMKDQVDQLLANGIAADFLNSTQSLEQQQQVQNKAIS---GELKLLYLSPEKV- 142
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F + C+ +S I+IDEAHC SQWGHDFRP+Y LG LK FP P+MALTA
Sbjct: 143 MTNSFFQFISLCN----VSFIAIDEAHCISQWGHDFRPEYTQLGGLKGCFPHAPIMALTA 198
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D+++ L + + +V + +RPN+ Y + EK ++++ ++
Sbjct: 199 TADSTTRQDILQNLSLNEPHLYVGSFDRPNIRYTLVEKFKP----MEQLCNFVAAQ--KG 252
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SR + E++A+ L++RGISA YHA M+ + RE V + ++ +QV+V T+AF
Sbjct: 253 KSGIVYCNSRSKVERIAEALKKRGISAAAYHAGMESSQREAVQQAFQRDNIQVVVATIAF 312
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV H LS+S+E YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 313 GMGINKSNVRFVAHFDLSRSIEAYYQETGRAGRDDLPAEAVLFYEPAD 360
>gi|432545657|ref|ZP_19782479.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE236]
gi|432551136|ref|ZP_19787884.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE237]
gi|432624192|ref|ZP_19860204.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE76]
gi|432817612|ref|ZP_20051362.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE115]
gi|431070550|gb|ELD78853.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE236]
gi|431075989|gb|ELD83505.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE237]
gi|431155723|gb|ELE56469.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE76]
gi|431360028|gb|ELG46649.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE115]
Length = 611
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|387771794|ref|ZP_10127951.1| ATP-dependent DNA helicase RecQ [Haemophilus parahaemolyticus
HK385]
gi|386908179|gb|EIJ72877.1| ATP-dependent DNA helicase RecQ [Haemophilus parahaemolyticus
HK385]
Length = 601
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/351 (46%), Positives = 236/351 (67%), Gaps = 15/351 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
NVFG +R QQE+I A L+G+D LVIM GGGKSLCYQ+P++ EGI LV+SPL+SL+
Sbjct: 13 NVFGYQQFRQGQQEVIEATLAGKDTLVIMTTGGGKSLCYQVPSLCLEGITLVISPLISLM 72
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L GI A L S+ + E+++ I KAL G+LK+LY++PEK+ ++ F
Sbjct: 73 KDQVDQLLTNGIEAGYLNSSQTLEEQRVIEQKALS---GQLKLLYLSPEKV-MTQGFYHF 128
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++S I++DEAHC SQWGHDFRP+Y LG L+ FP++P+MALTATA +
Sbjct: 129 ISHC----KISFIAVDEAHCVSQWGHDFRPEYTLLGNLRNTFPNIPLMALTATADPTTRA 184
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D++ L + + ++ + +RPN+ Y V+EK ++++AK+I +SGIVYC
Sbjct: 185 DILLHLRLNEPHTYLGSFDRPNIRYTVQEKFKP----MEQLAKFIAGQ--KGKSGIVYCN 238
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SRK+ E++ ++L R IS YHA M + RE V + ++ +QV+V TVAFGMGINK +
Sbjct: 239 SRKKVEEITEKLSARNISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATVAFGMGINKSN 298
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYE 434
VRFV+H L +S+E+YYQE+GRAGRD LPS+ ++F+ PAD M+ E
Sbjct: 299 VRFVVHFDLPRSIESYYQETGRAGRDDLPSQAVMFYDPADYAWLQKMLLEE 349
>gi|429083282|ref|ZP_19146326.1| ATP-dependent DNA helicase RecQ [Cronobacter condimenti 1330]
gi|426547898|emb|CCJ72367.1| ATP-dependent DNA helicase RecQ [Cronobacter condimenti 1330]
Length = 609
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 236/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 6 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 65
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S+++++ + G+ +++LY+ P
Sbjct: 66 GLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRTGQ--VRLLYIAP 123
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP M
Sbjct: 124 ERLMMDN-FIDNLTYWN----LTMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFM 178
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 179 ALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 234
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 235 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 292
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|392544476|ref|ZP_10291613.1| ATP-dependent DNA helicase [Pseudoalteromonas piscicida JCM 20779]
Length = 607
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 231/342 (67%), Gaps = 13/342 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R Q +II + L+G+D LV++ GGGKSLCYQ+PAVL G+ +V+SPL+SL+
Sbjct: 21 DVFGYSTFRDGQLDIIQSSLAGQDTLVLLPTGGGKSLCYQVPAVLFAGVTIVISPLISLM 80
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L A GI A + ++ + E +K Y AL +G LK+LYV PEK + + F+ ++
Sbjct: 81 QDQVAQLKAQGIAAEYINNSVAWEQQKDTYDAL--FQGRLKLLYVAPEK-ALQRDFIDRI 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
C+ +SL +IDEAHC S WGHDFRP Y L L+ FP VPMMALTATA + D
Sbjct: 138 SNCN----ISLFAIDEAHCVSHWGHDFRPHYFRLKELRQHFPSVPMMALTATADLATRKD 193
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L ++ + + +RPN+ Y + EK + ++ +Y++E +SGI+YC S
Sbjct: 194 IVQQLGMQAPFIYTGSFDRPNIRYTIEEKFKP----LSQLIRYLKEQ--KGQSGIIYCGS 247
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK + +A++L G +A YHA +D + R+ V R++++ +Q++V TVAFGMGINKP+V
Sbjct: 248 RKRVDDIAEKLIDAGFNAAGYHAGLDNDQRQFVQNRFARDDIQIVVATVAFGMGINKPNV 307
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
RFV+H+ + KSVE YYQE+GRAGRD L +E +++F PAD+PR
Sbjct: 308 RFVVHYDIPKSVEAYYQETGRAGRDSLAAEAVMYFDPADIPR 349
>gi|417173851|ref|ZP_12003647.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2608]
gi|417185330|ref|ZP_12010731.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0624]
gi|386176543|gb|EIH54022.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2608]
gi|386182630|gb|EIH65386.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0624]
Length = 611
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|293407448|ref|ZP_06651368.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1412]
gi|298383188|ref|ZP_06992782.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1302]
gi|300900624|ref|ZP_07118784.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 198-1]
gi|419937477|ref|ZP_14454373.1| ATP-dependent DNA helicase RecQ [Escherichia coli 576-1]
gi|422335405|ref|ZP_16416404.1| ATP-dependent DNA helicase recQ [Escherichia coli 4_1_47FAA]
gi|432355858|ref|ZP_19599118.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE2]
gi|432404223|ref|ZP_19646965.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE26]
gi|432428490|ref|ZP_19670969.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE181]
gi|432463191|ref|ZP_19705321.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE204]
gi|432478186|ref|ZP_19720170.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE208]
gi|432491658|ref|ZP_19733516.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE213]
gi|432520039|ref|ZP_19757217.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE228]
gi|432540207|ref|ZP_19777097.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE235]
gi|432633771|ref|ZP_19869687.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE80]
gi|432643423|ref|ZP_19879243.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE83]
gi|432668418|ref|ZP_19903986.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE116]
gi|432772598|ref|ZP_20006908.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE54]
gi|432841683|ref|ZP_20075137.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE140]
gi|432889621|ref|ZP_20102893.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE158]
gi|432915492|ref|ZP_20120747.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE190]
gi|433021080|ref|ZP_20209155.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE105]
gi|433055454|ref|ZP_20242605.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE122]
gi|433070190|ref|ZP_20256950.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE128]
gi|433160980|ref|ZP_20345793.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE177]
gi|433180699|ref|ZP_20365069.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE82]
gi|433205578|ref|ZP_20389319.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE95]
gi|291425559|gb|EFE98597.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1412]
gi|298276424|gb|EFI17943.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1302]
gi|300355875|gb|EFJ71745.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 198-1]
gi|373243555|gb|EHP63057.1| ATP-dependent DNA helicase recQ [Escherichia coli 4_1_47FAA]
gi|388397659|gb|EIL58631.1| ATP-dependent DNA helicase RecQ [Escherichia coli 576-1]
gi|430872071|gb|ELB95690.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE2]
gi|430922543|gb|ELC43295.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE26]
gi|430950316|gb|ELC69702.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE181]
gi|430985141|gb|ELD01748.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE204]
gi|431001695|gb|ELD17271.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE208]
gi|431017014|gb|ELD30531.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE213]
gi|431047458|gb|ELD57458.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE228]
gi|431066698|gb|ELD75322.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE235]
gi|431166942|gb|ELE67245.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE80]
gi|431177006|gb|ELE76946.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE83]
gi|431197038|gb|ELE95905.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE116]
gi|431323251|gb|ELG10799.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE54]
gi|431384955|gb|ELG68945.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE140]
gi|431413215|gb|ELG96009.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE158]
gi|431435094|gb|ELH16707.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE190]
gi|431526412|gb|ELI03166.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE105]
gi|431565194|gb|ELI38332.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE122]
gi|431578296|gb|ELI50904.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE128]
gi|431673078|gb|ELJ39309.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE177]
gi|431697564|gb|ELJ62670.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE82]
gi|431715540|gb|ELJ79688.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE95]
Length = 611
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|7428315|pir||BVECRQ DNA helicase recQ - Escherichia coli (strain K-12)
Length = 610
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|434389644|ref|YP_007100255.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
gi|428020634|gb|AFY96728.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
Length = 743
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 230/339 (67%), Gaps = 11/339 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R+ Q+EII L+ RD+LV+M GGGKSLC+QLPA+L+ G+ +VVSPL++L+QD
Sbjct: 19 FGYDEFRSGQREIITTALANRDLLVVMPTGGGKSLCFQLPALLKNGVTIVVSPLIALMQD 78
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSK-LE 205
QV LA GIPA L S+ + E+++ A+ GE +K+LYV PE++++ F+S L
Sbjct: 79 QVQLLANNGIPATFLNSSITTEEKRDRVAAIHNGE--IKLLYVAPERLNQE--FISNFLV 134
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
H ++ +IDEAHC S+WGHDFRPDY+ L L+ FP VP + LTATAT +V++D+
Sbjct: 135 DLHQEVGIAGFAIDEAHCVSEWGHDFRPDYRKLAQLRHYFPKVPWLGLTATATDRVRSDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L +R+ +++ NRPNL+Y VR K++ E+ +++S SGI+YC SR
Sbjct: 195 INQLELREPHVHIASFNRPNLYYEVRRKTTA---PYKELLAQVKQS---EGSGIIYCLSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ +++ +L+Q GI YHA +D R K + ++ ++VIV TVAFGMGINKPDVR
Sbjct: 249 KKVDELTTKLKQDGIKVVPYHAGLDGETRTKNQNSFIRDDVKVIVATVAFGMGINKPDVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FVIH+ L +++E YYQESGRAGRDG P+ C L+F D+
Sbjct: 309 FVIHYDLPRNIEGYYQESGRAGRDGEPAHCTLYFGMGDI 347
>gi|392558417|gb|EIW51605.1| ATP-dependent DNA helicase [Trametes versicolor FP-101664 SS1]
Length = 717
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/402 (42%), Positives = 253/402 (62%), Gaps = 26/402 (6%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+ I NA + GRDV+ IM GGGKSL YQLPA++ G LV+SPLL+LI
Sbjct: 3 SVFGFDSFRLCQEGICNASMDGRDVVGIMPTGGGKSLGYQLPALMVSGCTLVISPLLALI 62
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL-EKGEG-----ELKMLYVTPEKISKSK 198
+DQ+M L G+ A MLTS TS+ ++ IY L E G E+K+ YVTPEKI+KSK
Sbjct: 63 RDQIMHLNEAGVDAVMLTSATSQAEQNNIYSRLREMASGASHAPEIKLCYVTPEKIAKSK 122
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F S LEK + +L+ IDEAHC SQ GHDFRPDY+ L L+ FP VP++AL+AT
Sbjct: 123 TFTSALEKLYRVNKLARFVIDEAHCVSQQGHDFRPDYQRLSSLRQLFPSVPILALSATCP 182
Query: 259 QKVQNDLMEMLHI-----------RKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
V DL++ L + + + F + + R NL Y V K S + I + Y
Sbjct: 183 PIVLRDLLKTLQMGAPIIGTAATTKGTVLFSAPLYRKNLHYSVLPKPSSAQSSIRAMCDY 242
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQ---RGISADYYHADMDINAREKVHMRWSKN 364
I E +P ++GIVYC S+K+ E VA+ L + R I YHAD+ + +E +H +W
Sbjct: 243 ILEHHPK-DTGIVYCLSKKDAEHVAEALSEESGRKILTGVYHADVADSVKESLHKKWRSG 301
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
+++V+ T+AFG+GI+K DVR+V+HH++ KS++ +YQESGRAGRDG ++C+L++RP D
Sbjct: 302 QVKVVCATIAFGLGIDKGDVRYVLHHTVRKSLDGFYQESGRAGRDGKDADCVLYYRPQDA 361
Query: 425 PRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEK 466
R S+ +++G + + +++++ ++E+ R + F +
Sbjct: 362 TRIGSLTCGDHNGEEKVLSMLKFA-----CDLEECRKIQFAR 398
>gi|417692248|ref|ZP_12341449.1| ATP-dependent DNA helicase RecQ [Shigella boydii 5216-82]
gi|332084419|gb|EGI89615.1| ATP-dependent DNA helicase RecQ [Shigella boydii 5216-82]
Length = 609
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|424818190|ref|ZP_18243341.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii ECD227]
gi|325499210|gb|EGC97069.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii ECD227]
Length = 609
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EIIN VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIINTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|74314334|ref|YP_312753.1| ATP-dependent DNA helicase RecQ [Shigella sonnei Ss046]
gi|157163298|ref|YP_001460616.1| ATP-dependent DNA helicase RecQ [Escherichia coli HS]
gi|162135918|ref|YP_026263.3| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
MG1655]
gi|170083303|ref|YP_001732623.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. K-12 substr.
DH10B]
gi|187734194|ref|YP_001882520.1| ATP-dependent DNA helicase RecQ [Shigella boydii CDC 3083-94]
gi|188494940|ref|ZP_03002210.1| ATP-dependent DNA helicase RecQ [Escherichia coli 53638]
gi|218697543|ref|YP_002405210.1| ATP-dependent DNA helicase RecQ [Escherichia coli 55989]
gi|218701485|ref|YP_002409114.1| ATP-dependent DNA helicase RecQ [Escherichia coli IAI39]
gi|222158515|ref|YP_002558654.1| ATP-dependent DNA helicase recQ [Escherichia coli LF82]
gi|238902897|ref|YP_002928693.1| ATP-dependent DNA helicase RecQ [Escherichia coli BW2952]
gi|254795820|ref|YP_003080657.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
TW14359]
gi|260857772|ref|YP_003231663.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
11368]
gi|293468140|ref|ZP_06664552.1| ATP-dependent DNA helicase RecQ [Escherichia coli B088]
gi|383181074|ref|YP_005459079.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 53G]
gi|386601849|ref|YP_006103355.1| ATP-dependent DNA helicase RecQ [Escherichia coli IHE3034]
gi|386616632|ref|YP_006136298.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNK88]
gi|386641456|ref|YP_006108254.1| ATP-dependent DNA helicase RecQ [Escherichia coli ABU 83972]
gi|387509272|ref|YP_006161528.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
RM12579]
gi|387609630|ref|YP_006098486.1| ATP-dependent DNA helicase [Escherichia coli 042]
gi|388479428|ref|YP_491620.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
W3110]
gi|407466829|ref|YP_006786729.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407484445|ref|YP_006781595.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2011C-3493]
gi|410484991|ref|YP_006772537.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414578705|ref|ZP_11435867.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3233-85]
gi|415773800|ref|ZP_11486365.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3431]
gi|415786023|ref|ZP_11493337.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPECa14]
gi|415811064|ref|ZP_11503414.1| ATP-dependent DNA helicase RecQ [Escherichia coli LT-68]
gi|415846355|ref|ZP_11525434.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 53G]
gi|417583446|ref|ZP_12234244.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_B2F1]
gi|417615484|ref|ZP_12265932.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_EH250]
gi|417620493|ref|ZP_12270894.1| ATP-dependent DNA helicase RecQ [Escherichia coli G58-1]
gi|417631303|ref|ZP_12281535.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_MHI813]
gi|417636778|ref|ZP_12286983.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_S1191]
gi|417641842|ref|ZP_12291966.1| ATP-dependent DNA helicase RecQ [Escherichia coli TX1999]
gi|417675001|ref|ZP_12324430.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 155-74]
gi|417709647|ref|ZP_12358664.1| ATP-dependent DNA helicase RecQ [Shigella flexneri VA-6]
gi|417807513|ref|ZP_12454440.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
LB226692]
gi|417829992|ref|ZP_12476531.1| ATP-dependent DNA helicase RecQ [Shigella flexneri J1713]
gi|417835254|ref|ZP_12481693.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
01-09591]
gi|417945670|ref|ZP_12588900.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH140A]
gi|417977689|ref|ZP_12618470.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH001]
gi|418269891|ref|ZP_12888068.1| ATP-dependent DNA helicase RecQ [Shigella sonnei str. Moseley]
gi|418305454|ref|ZP_12917248.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNF18]
gi|419043191|ref|ZP_13590168.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3A]
gi|419053701|ref|ZP_13600566.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3B]
gi|419059737|ref|ZP_13606535.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3C]
gi|419065783|ref|ZP_13612482.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3D]
gi|419072168|ref|ZP_13617765.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3E]
gi|419077975|ref|ZP_13623471.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3F]
gi|419083146|ref|ZP_13628587.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4A]
gi|419089130|ref|ZP_13634478.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4B]
gi|419094916|ref|ZP_13640190.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4C]
gi|419100733|ref|ZP_13645918.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4D]
gi|419101663|ref|ZP_13646838.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4E]
gi|419112709|ref|ZP_13657750.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4F]
gi|419117387|ref|ZP_13662394.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5A]
gi|419123336|ref|ZP_13668272.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5B]
gi|419128635|ref|ZP_13673503.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5C]
gi|419134045|ref|ZP_13678868.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5D]
gi|419139187|ref|ZP_13683976.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5E]
gi|419144930|ref|ZP_13689656.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6A]
gi|419150857|ref|ZP_13695502.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6B]
gi|419156337|ref|ZP_13700890.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6C]
gi|419161695|ref|ZP_13706184.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6D]
gi|419166788|ref|ZP_13711235.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6E]
gi|419172782|ref|ZP_13716653.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7A]
gi|419177507|ref|ZP_13721313.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7B]
gi|419183343|ref|ZP_13726948.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7C]
gi|419188957|ref|ZP_13732459.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7D]
gi|419193893|ref|ZP_13737331.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7E]
gi|419212347|ref|ZP_13755409.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8C]
gi|419218190|ref|ZP_13761179.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8D]
gi|419229300|ref|ZP_13772135.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9A]
gi|419235104|ref|ZP_13777867.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9B]
gi|419240508|ref|ZP_13783209.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9C]
gi|419245923|ref|ZP_13788552.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9D]
gi|419251927|ref|ZP_13794490.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9E]
gi|419257379|ref|ZP_13799876.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10A]
gi|419263508|ref|ZP_13805912.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10B]
gi|419264798|ref|ZP_13807187.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10C]
gi|419270449|ref|ZP_13812783.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10D]
gi|419286604|ref|ZP_13828763.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10F]
gi|419292039|ref|ZP_13834121.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11A]
gi|419297319|ref|ZP_13839353.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11B]
gi|419308855|ref|ZP_13850743.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11D]
gi|419393861|ref|ZP_13934658.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15A]
gi|419399220|ref|ZP_13939979.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15B]
gi|419404466|ref|ZP_13945182.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15C]
gi|419409630|ref|ZP_13950311.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15D]
gi|419415188|ref|ZP_13955818.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15E]
gi|419812399|ref|ZP_14337266.1| ATP-dependent DNA helicase RecQ [Escherichia coli O32:H37 str. P4]
gi|419874689|ref|ZP_14396603.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9534]
gi|419879645|ref|ZP_14401076.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9545]
gi|419902626|ref|ZP_14421829.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9942]
gi|419905653|ref|ZP_14424609.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10026]
gi|420099093|ref|ZP_14610339.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9455]
gi|420110650|ref|ZP_14620605.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9553]
gi|420113527|ref|ZP_14623259.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10021]
gi|420119768|ref|ZP_14629022.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10030]
gi|420126752|ref|ZP_14635465.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10224]
gi|420131499|ref|ZP_14639935.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9952]
gi|420272370|ref|ZP_14774716.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA22]
gi|420277955|ref|ZP_14780233.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA40]
gi|420283156|ref|ZP_14785386.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW06591]
gi|420284102|ref|ZP_14786323.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10246]
gi|420289859|ref|ZP_14792029.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW11039]
gi|420300926|ref|ZP_14802968.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09109]
gi|420306852|ref|ZP_14808837.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10119]
gi|420312140|ref|ZP_14814065.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1738]
gi|420317897|ref|ZP_14819765.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1734]
gi|420322644|ref|ZP_14824463.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2850-71]
gi|420333543|ref|ZP_14835179.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-1770]
gi|420349685|ref|ZP_14851058.1| ATP-dependent DNA helicase RecQ [Shigella boydii 965-58]
gi|420361261|ref|ZP_14862203.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3226-85]
gi|420365796|ref|ZP_14866655.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 4822-66]
gi|420382758|ref|ZP_14882188.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 225-75]
gi|421814877|ref|ZP_16250576.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0416]
gi|421820625|ref|ZP_16256107.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0821]
gi|421826602|ref|ZP_16261954.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK920]
gi|421833458|ref|ZP_16268735.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA7]
gi|423728051|ref|ZP_17701830.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA31]
gi|424080156|ref|ZP_17817094.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA505]
gi|424086551|ref|ZP_17823020.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA517]
gi|424092965|ref|ZP_17828872.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1996]
gi|424099656|ref|ZP_17834892.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1985]
gi|424105849|ref|ZP_17840562.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1990]
gi|424112488|ref|ZP_17846698.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93-001]
gi|424118422|ref|ZP_17852240.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA3]
gi|424124621|ref|ZP_17857901.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA5]
gi|424130785|ref|ZP_17863671.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA9]
gi|424137098|ref|ZP_17869517.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA10]
gi|424143655|ref|ZP_17875490.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA14]
gi|424150024|ref|ZP_17881383.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA15]
gi|424163751|ref|ZP_17886802.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA24]
gi|424257401|ref|ZP_17892343.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA25]
gi|424336089|ref|ZP_17898279.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA28]
gi|424452358|ref|ZP_17903983.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA32]
gi|424458522|ref|ZP_17909602.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA33]
gi|424465052|ref|ZP_17915355.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA39]
gi|424471287|ref|ZP_17921068.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA41]
gi|424477774|ref|ZP_17927073.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA42]
gi|424483558|ref|ZP_17932522.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07945]
gi|424489753|ref|ZP_17938273.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09098]
gi|424496448|ref|ZP_17943963.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09195]
gi|424503074|ref|ZP_17949941.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4203]
gi|424509345|ref|ZP_17955696.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4196]
gi|424516755|ref|ZP_17961322.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14313]
gi|424522879|ref|ZP_17966967.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14301]
gi|424528750|ref|ZP_17972445.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4421]
gi|424534892|ref|ZP_17978224.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4422]
gi|424540980|ref|ZP_17983908.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4013]
gi|424547130|ref|ZP_17989443.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4402]
gi|424553325|ref|ZP_17995135.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4439]
gi|424559526|ref|ZP_18000903.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4436]
gi|424565847|ref|ZP_18006833.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4437]
gi|424571976|ref|ZP_18012493.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4448]
gi|424578134|ref|ZP_18018151.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1845]
gi|424583956|ref|ZP_18023586.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1863]
gi|424746311|ref|ZP_18174557.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756582|ref|ZP_18184393.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425100630|ref|ZP_18503350.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4870]
gi|425106704|ref|ZP_18509003.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.2239]
gi|425112706|ref|ZP_18514611.1| ATP-dependent DNA helicase RecQ [Escherichia coli 6.0172]
gi|425117443|ref|ZP_18519216.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0566]
gi|425122162|ref|ZP_18523834.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0569]
gi|425128636|ref|ZP_18529790.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0586]
gi|425134402|ref|ZP_18535238.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.2524]
gi|425140995|ref|ZP_18541361.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0833]
gi|425146671|ref|ZP_18546648.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0869]
gi|425152786|ref|ZP_18552384.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.0221]
gi|425158685|ref|ZP_18557932.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA34]
gi|425165005|ref|ZP_18563876.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA506]
gi|425170752|ref|ZP_18569210.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA507]
gi|425176796|ref|ZP_18574900.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA504]
gi|425182855|ref|ZP_18580536.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1999]
gi|425189156|ref|ZP_18586411.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1997]
gi|425195883|ref|ZP_18592638.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE1487]
gi|425202362|ref|ZP_18598555.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE037]
gi|425208739|ref|ZP_18604521.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK2001]
gi|425214496|ref|ZP_18609883.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA4]
gi|425220623|ref|ZP_18615570.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA23]
gi|425227269|ref|ZP_18621720.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA49]
gi|425233426|ref|ZP_18627450.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA45]
gi|425239348|ref|ZP_18633053.1| ATP-dependent DNA helicase RecQ [Escherichia coli TT12B]
gi|425245582|ref|ZP_18638874.1| ATP-dependent DNA helicase RecQ [Escherichia coli MA6]
gi|425251778|ref|ZP_18644706.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5905]
gi|425257577|ref|ZP_18650057.1| ATP-dependent DNA helicase RecQ [Escherichia coli CB7326]
gi|425263832|ref|ZP_18655808.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC96038]
gi|425269824|ref|ZP_18661435.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5412]
gi|425275115|ref|ZP_18666494.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW15901]
gi|425285691|ref|ZP_18676703.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW00353]
gi|425291039|ref|ZP_18681846.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3006]
gi|425297302|ref|ZP_18687410.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA38]
gi|425313995|ref|ZP_18703147.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1735]
gi|425319977|ref|ZP_18708738.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1736]
gi|425326116|ref|ZP_18714427.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1737]
gi|425332427|ref|ZP_18720224.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1846]
gi|425338604|ref|ZP_18725927.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1847]
gi|425344898|ref|ZP_18731771.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1848]
gi|425350737|ref|ZP_18737180.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1849]
gi|425357009|ref|ZP_18743055.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1850]
gi|425362958|ref|ZP_18748590.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1856]
gi|425369225|ref|ZP_18754286.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1862]
gi|425375530|ref|ZP_18760154.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1864]
gi|425382165|ref|ZP_18766145.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1865]
gi|425388417|ref|ZP_18771960.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1866]
gi|425395144|ref|ZP_18778235.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1868]
gi|425401199|ref|ZP_18783889.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1869]
gi|425407294|ref|ZP_18789499.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1870]
gi|425413652|ref|ZP_18795398.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE098]
gi|425419968|ref|ZP_18801223.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK523]
gi|425431264|ref|ZP_18811857.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1304]
gi|428949672|ref|ZP_19021928.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1467]
gi|428955744|ref|ZP_19027518.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1042]
gi|428961768|ref|ZP_19033029.1| ATP-dependent DNA helicase RecQ [Escherichia coli 89.0511]
gi|428968370|ref|ZP_19039058.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0091]
gi|428974146|ref|ZP_19044441.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0039]
gi|428980535|ref|ZP_19050328.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.2281]
gi|428986311|ref|ZP_19055684.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0055]
gi|428992459|ref|ZP_19061431.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0056]
gi|428998356|ref|ZP_19066931.1| ATP-dependent DNA helicase RecQ [Escherichia coli 94.0618]
gi|429004744|ref|ZP_19072788.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0183]
gi|429010783|ref|ZP_19078163.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.1288]
gi|429017247|ref|ZP_19084107.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0943]
gi|429023086|ref|ZP_19089586.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0428]
gi|429029170|ref|ZP_19095125.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0427]
gi|429035310|ref|ZP_19100818.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0939]
gi|429041420|ref|ZP_19106492.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0932]
gi|429047246|ref|ZP_19111942.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0107]
gi|429052597|ref|ZP_19117153.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0003]
gi|429058154|ref|ZP_19122396.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.1742]
gi|429063674|ref|ZP_19127630.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0007]
gi|429069876|ref|ZP_19133298.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0672]
gi|429075653|ref|ZP_19138895.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0678]
gi|429080853|ref|ZP_19143978.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0713]
gi|429829081|ref|ZP_19360059.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0109]
gi|429835546|ref|ZP_19365772.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0010]
gi|443619893|ref|YP_007383749.1| ATP-dependent DNA helicase RecQ [Escherichia coli APEC O78]
gi|444927567|ref|ZP_21246820.1| ATP-dependent DNA helicase RecQ [Escherichia coli 09BKT078844]
gi|444933176|ref|ZP_21252172.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0814]
gi|444938639|ref|ZP_21257361.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0815]
gi|444944245|ref|ZP_21262719.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0816]
gi|444949646|ref|ZP_21267927.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0839]
gi|444955383|ref|ZP_21273438.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0848]
gi|444960749|ref|ZP_21278560.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1753]
gi|444965954|ref|ZP_21283505.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1775]
gi|444972010|ref|ZP_21289338.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1793]
gi|444977298|ref|ZP_21294364.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1805]
gi|444982637|ref|ZP_21299533.1| ATP-dependent DNA helicase RecQ [Escherichia coli ATCC 700728]
gi|444988047|ref|ZP_21304814.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA11]
gi|444993429|ref|ZP_21310059.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA19]
gi|444998607|ref|ZP_21315096.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA13]
gi|445004152|ref|ZP_21320531.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA2]
gi|445009571|ref|ZP_21325789.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA47]
gi|445014650|ref|ZP_21330744.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA48]
gi|445020572|ref|ZP_21336526.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA8]
gi|445025933|ref|ZP_21341746.1| ATP-dependent DNA helicase RecQ [Escherichia coli 7.1982]
gi|445031388|ref|ZP_21347043.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1781]
gi|445036812|ref|ZP_21352329.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1762]
gi|445042490|ref|ZP_21357851.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA35]
gi|445047694|ref|ZP_21362931.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4880]
gi|445061301|ref|ZP_21373807.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0670]
gi|450226865|ref|ZP_21897539.1| ATP-dependent DNA helicase RecQ [Escherichia coli O08]
gi|450252923|ref|ZP_21902297.1| ATP-dependent DNA helicase RecQ [Escherichia coli S17]
gi|54041622|sp|P15043.5|RECQ_ECOLI RecName: Full=ATP-dependent DNA helicase RecQ
gi|48994977|gb|AAT48221.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
MG1655]
gi|73857811|gb|AAZ90518.1| ATP-dependent DNA helicase [Shigella sonnei Ss046]
gi|85676229|dbj|BAE77479.1| ATP-dependent DNA helicase [Escherichia coli str. K12 substr.
W3110]
gi|157068978|gb|ABV08233.1| ATP-dependent DNA helicase RecQ [Escherichia coli HS]
gi|169891138|gb|ACB04845.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
DH10B]
gi|187431186|gb|ACD10460.1| ATP-dependent DNA helicase RecQ [Shigella boydii CDC 3083-94]
gi|188490139|gb|EDU65242.1| ATP-dependent DNA helicase RecQ [Escherichia coli 53638]
gi|218354275|emb|CAV00962.1| ATP-dependent DNA helicase [Escherichia coli 55989]
gi|218371471|emb|CAR19306.1| ATP-dependent DNA helicase [Escherichia coli IAI39]
gi|222035520|emb|CAP78265.1| ATP-dependent DNA helicase recQ [Escherichia coli LF82]
gi|238860042|gb|ACR62040.1| ATP-dependent DNA helicase [Escherichia coli BW2952]
gi|254595220|gb|ACT74581.1| ATP-dependent DNA helicase [Escherichia coli O157:H7 str. TW14359]
gi|257756421|dbj|BAI27923.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
11368]
gi|284923930|emb|CBG37029.1| ATP-dependent DNA helicase [Escherichia coli 042]
gi|291321518|gb|EFE60956.1| ATP-dependent DNA helicase RecQ [Escherichia coli B088]
gi|294490610|gb|ADE89366.1| ATP-dependent DNA helicase RecQ [Escherichia coli IHE3034]
gi|307555948|gb|ADN48723.1| ATP-dependent DNA helicase RecQ [Escherichia coli ABU 83972]
gi|315618731|gb|EFU99316.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3431]
gi|323155231|gb|EFZ41415.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPECa14]
gi|323167577|gb|EFZ53283.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 53G]
gi|323173439|gb|EFZ59068.1| ATP-dependent DNA helicase RecQ [Escherichia coli LT-68]
gi|332084978|gb|EGI90160.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 155-74]
gi|332345801|gb|AEE59135.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNK88]
gi|332996969|gb|EGK16587.1| ATP-dependent DNA helicase RecQ [Shigella flexneri VA-6]
gi|335573445|gb|EGM59800.1| ATP-dependent DNA helicase RecQ [Shigella flexneri J1713]
gi|339417552|gb|AEJ59224.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNF18]
gi|340731834|gb|EGR60973.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
01-09591]
gi|340737771|gb|EGR72025.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
LB226692]
gi|342362570|gb|EGU26687.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH140A]
gi|344192682|gb|EGV46771.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH001]
gi|345333780|gb|EGW66227.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_B2F1]
gi|345357660|gb|EGW89852.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_EH250]
gi|345369561|gb|EGX01544.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_MHI813]
gi|345369710|gb|EGX01692.1| ATP-dependent DNA helicase RecQ [Escherichia coli G58-1]
gi|345384846|gb|EGX14704.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_S1191]
gi|345389797|gb|EGX19598.1| ATP-dependent DNA helicase RecQ [Escherichia coli TX1999]
gi|359333954|dbj|BAL40401.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
MDS42]
gi|374361266|gb|AEZ42973.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
RM12579]
gi|377889383|gb|EHU53847.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3B]
gi|377900947|gb|EHU65271.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3A]
gi|377901914|gb|EHU66224.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3C]
gi|377903769|gb|EHU68059.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3D]
gi|377906294|gb|EHU70540.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3E]
gi|377916995|gb|EHU81064.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3F]
gi|377923006|gb|EHU86977.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4A]
gi|377926673|gb|EHU90603.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4B]
gi|377937309|gb|EHV01090.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4D]
gi|377937816|gb|EHV01589.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4C]
gi|377952265|gb|EHV15861.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4F]
gi|377957081|gb|EHV20618.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4E]
gi|377957368|gb|EHV20903.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5A]
gi|377960982|gb|EHV24457.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5B]
gi|377969378|gb|EHV32756.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5C]
gi|377970401|gb|EHV33763.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5D]
gi|377980238|gb|EHV43504.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5E]
gi|377988783|gb|EHV51958.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6B]
gi|377989115|gb|EHV52284.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6A]
gi|377992641|gb|EHV55787.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6C]
gi|378003621|gb|EHV66662.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6D]
gi|378006269|gb|EHV69255.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6E]
gi|378010076|gb|EHV73023.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7A]
gi|378020960|gb|EHV83688.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7C]
gi|378023963|gb|EHV86628.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7D]
gi|378028415|gb|EHV91033.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7B]
gi|378035128|gb|EHV97690.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7E]
gi|378048184|gb|EHW10539.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8C]
gi|378057740|gb|EHW19963.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8D]
gi|378068432|gb|EHW30533.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9A]
gi|378073450|gb|EHW35501.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9B]
gi|378078658|gb|EHW40639.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9C]
gi|378086522|gb|EHW48397.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9D]
gi|378088985|gb|EHW50834.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9E]
gi|378096895|gb|EHW58661.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10A]
gi|378102153|gb|EHW63835.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10B]
gi|378119748|gb|EHW81237.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10C]
gi|378121916|gb|EHW83364.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10D]
gi|378124653|gb|EHW86058.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11A]
gi|378125192|gb|EHW86594.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10F]
gi|378138180|gb|EHW99439.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11B]
gi|378144053|gb|EHX05229.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11D]
gi|378233768|gb|EHX93852.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15A]
gi|378239942|gb|EHX99919.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15B]
gi|378242825|gb|EHY02776.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15C]
gi|378250902|gb|EHY10804.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15D]
gi|378255628|gb|EHY15485.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15E]
gi|385154769|gb|EIF16778.1| ATP-dependent DNA helicase RecQ [Escherichia coli O32:H37 str. P4]
gi|388350582|gb|EIL15941.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9534]
gi|388370946|gb|EIL34439.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9545]
gi|388373611|gb|EIL36859.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9942]
gi|388380812|gb|EIL43394.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10026]
gi|390637133|gb|EIN16689.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1996]
gi|390637513|gb|EIN17059.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA505]
gi|390638307|gb|EIN17820.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA517]
gi|390655763|gb|EIN33679.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1985]
gi|390656665|gb|EIN34525.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93-001]
gi|390659431|gb|EIN37196.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1990]
gi|390673956|gb|EIN50168.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA3]
gi|390677280|gb|EIN53339.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA5]
gi|390680714|gb|EIN56541.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA9]
gi|390691815|gb|EIN66538.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA10]
gi|390696174|gb|EIN70668.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA14]
gi|390697410|gb|EIN71830.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA15]
gi|390711245|gb|EIN84228.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA22]
gi|390717538|gb|EIN90322.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA24]
gi|390718182|gb|EIN90940.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA25]
gi|390724300|gb|EIN96860.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA28]
gi|390736865|gb|EIO08185.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA31]
gi|390737487|gb|EIO08782.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA32]
gi|390741100|gb|EIO12195.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA33]
gi|390755766|gb|EIO25297.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA40]
gi|390758421|gb|EIO27875.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA39]
gi|390761852|gb|EIO31126.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA41]
gi|390764847|gb|EIO34042.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA42]
gi|390779055|gb|EIO46792.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW06591]
gi|390786025|gb|EIO53561.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07945]
gi|390796590|gb|EIO63861.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10246]
gi|390799973|gb|EIO67092.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09098]
gi|390803163|gb|EIO70187.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW11039]
gi|390804554|gb|EIO71520.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09109]
gi|390813588|gb|EIO80198.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10119]
gi|390821916|gb|EIO88072.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09195]
gi|390822385|gb|EIO88509.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4203]
gi|390827531|gb|EIO93291.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4196]
gi|390840654|gb|EIP04669.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14313]
gi|390842695|gb|EIP06532.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14301]
gi|390847735|gb|EIP11259.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4421]
gi|390858215|gb|EIP20623.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4422]
gi|390862503|gb|EIP24686.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4013]
gi|390866548|gb|EIP28505.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4402]
gi|390874830|gb|EIP35918.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4439]
gi|390880191|gb|EIP40894.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4436]
gi|390890079|gb|EIP49765.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4437]
gi|390891420|gb|EIP51051.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4448]
gi|390897852|gb|EIP57152.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1738]
gi|390905830|gb|EIP64755.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1734]
gi|390915489|gb|EIP74001.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1845]
gi|390915828|gb|EIP74328.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1863]
gi|391244920|gb|EIQ04196.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2850-71]
gi|391245159|gb|EIQ04433.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-1770]
gi|391265596|gb|EIQ24564.1| ATP-dependent DNA helicase RecQ [Shigella boydii 965-58]
gi|391277456|gb|EIQ36200.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3226-85]
gi|391280624|gb|EIQ39291.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3233-85]
gi|391291630|gb|EIQ50010.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 4822-66]
gi|391297979|gb|EIQ56004.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 225-75]
gi|394391248|gb|EJE68134.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10224]
gi|394402810|gb|EJE78500.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9553]
gi|394411617|gb|EJE85840.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10021]
gi|394423765|gb|EJE96980.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9455]
gi|394430839|gb|EJF03117.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10030]
gi|394431778|gb|EJF03941.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9952]
gi|397894923|gb|EJL11359.1| ATP-dependent DNA helicase RecQ [Shigella sonnei str. Moseley]
gi|406780153|gb|AFS59577.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056742|gb|AFS76793.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2011C-3493]
gi|407062864|gb|AFS83911.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408061419|gb|EKG95938.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA7]
gi|408063920|gb|EKG98407.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK920]
gi|408065096|gb|EKG99572.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA34]
gi|408075235|gb|EKH09473.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA506]
gi|408080230|gb|EKH14314.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA507]
gi|408088415|gb|EKH21787.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA504]
gi|408094586|gb|EKH27603.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1999]
gi|408100770|gb|EKH33252.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1997]
gi|408105693|gb|EKH37840.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE1487]
gi|408112433|gb|EKH44083.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE037]
gi|408118686|gb|EKH49805.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK2001]
gi|408125003|gb|EKH55643.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA4]
gi|408134793|gb|EKH64609.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA23]
gi|408136802|gb|EKH66532.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA49]
gi|408143753|gb|EKH73027.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA45]
gi|408152134|gb|EKH80583.1| ATP-dependent DNA helicase RecQ [Escherichia coli TT12B]
gi|408157176|gb|EKH85342.1| ATP-dependent DNA helicase RecQ [Escherichia coli MA6]
gi|408161220|gb|EKH89191.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5905]
gi|408170320|gb|EKH97532.1| ATP-dependent DNA helicase RecQ [Escherichia coli CB7326]
gi|408177268|gb|EKI04083.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC96038]
gi|408180273|gb|EKI06898.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5412]
gi|408189631|gb|EKI15342.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW15901]
gi|408197818|gb|EKI23069.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW00353]
gi|408208793|gb|EKI33413.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3006]
gi|408210666|gb|EKI35226.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA38]
gi|408223507|gb|EKI47276.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1735]
gi|408234880|gb|EKI57873.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1736]
gi|408237737|gb|EKI60587.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1737]
gi|408242911|gb|EKI65462.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1846]
gi|408251792|gb|EKI73509.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1847]
gi|408256146|gb|EKI77539.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1848]
gi|408262801|gb|EKI83715.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1849]
gi|408271059|gb|EKI91208.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1850]
gi|408274185|gb|EKI94210.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1856]
gi|408282088|gb|EKJ01436.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1862]
gi|408288474|gb|EKJ07297.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1864]
gi|408293101|gb|EKJ11565.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1865]
gi|408303336|gb|EKJ20798.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1868]
gi|408304519|gb|EKJ21944.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1866]
gi|408315855|gb|EKJ32154.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1869]
gi|408321307|gb|EKJ37346.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1870]
gi|408323034|gb|EKJ39003.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE098]
gi|408334009|gb|EKJ48917.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK523]
gi|408341948|gb|EKJ56384.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1304]
gi|408544804|gb|EKK22250.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.2239]
gi|408545335|gb|EKK22771.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4870]
gi|408545856|gb|EKK23279.1| ATP-dependent DNA helicase RecQ [Escherichia coli 6.0172]
gi|408563231|gb|EKK39371.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0566]
gi|408563445|gb|EKK39578.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0586]
gi|408564373|gb|EKK40483.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0569]
gi|408575663|gb|EKK51316.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0833]
gi|408578574|gb|EKK54091.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.2524]
gi|408588317|gb|EKK62900.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0869]
gi|408593310|gb|EKK67634.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.0221]
gi|408599002|gb|EKK72934.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0416]
gi|408608686|gb|EKK82072.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0821]
gi|421948409|gb|EKU05429.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949627|gb|EKU06557.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427201317|gb|EKV71710.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1042]
gi|427201385|gb|EKV71774.1| ATP-dependent DNA helicase RecQ [Escherichia coli 89.0511]
gi|427204734|gb|EKV75006.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1467]
gi|427217586|gb|EKV86644.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0091]
gi|427221262|gb|EKV90123.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.2281]
gi|427224265|gb|EKV92982.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0039]
gi|427237737|gb|EKW05261.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0056]
gi|427238116|gb|EKW05636.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0055]
gi|427242488|gb|EKW09895.1| ATP-dependent DNA helicase RecQ [Escherichia coli 94.0618]
gi|427255805|gb|EKW22046.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0183]
gi|427257425|gb|EKW23551.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0943]
gi|427257996|gb|EKW24110.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.1288]
gi|427273047|gb|EKW37747.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0428]
gi|427274751|gb|EKW39394.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0427]
gi|427280527|gb|EKW44885.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0939]
gi|427289002|gb|EKW52599.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0932]
gi|427295793|gb|EKW58875.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0107]
gi|427297634|gb|EKW60664.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0003]
gi|427307738|gb|EKW70166.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.1742]
gi|427310706|gb|EKW72942.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0007]
gi|427315500|gb|EKW77496.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0672]
gi|427324990|gb|EKW86445.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0678]
gi|427326402|gb|EKW87820.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0713]
gi|429250725|gb|EKY35374.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0109]
gi|429251161|gb|EKY35784.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0010]
gi|443424401|gb|AGC89305.1| ATP-dependent DNA helicase RecQ [Escherichia coli APEC O78]
gi|444534888|gb|ELV15066.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0814]
gi|444536334|gb|ELV16361.1| ATP-dependent DNA helicase RecQ [Escherichia coli 09BKT078844]
gi|444545204|gb|ELV24138.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0815]
gi|444554349|gb|ELV31919.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0816]
gi|444554556|gb|ELV32113.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0839]
gi|444559217|gb|ELV36456.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0848]
gi|444568882|gb|ELV45531.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1753]
gi|444572276|gb|ELV48715.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1775]
gi|444575846|gb|ELV52071.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1793]
gi|444587827|gb|ELV63229.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1805]
gi|444589282|gb|ELV64624.1| ATP-dependent DNA helicase RecQ [Escherichia coli ATCC 700728]
gi|444589460|gb|ELV64795.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA11]
gi|444603190|gb|ELV77901.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA19]
gi|444603275|gb|ELV77985.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA13]
gi|444612464|gb|ELV86757.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA2]
gi|444618782|gb|ELV92849.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA47]
gi|444620257|gb|ELV94266.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA48]
gi|444626765|gb|ELW00555.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA8]
gi|444635256|gb|ELW08688.1| ATP-dependent DNA helicase RecQ [Escherichia coli 7.1982]
gi|444637104|gb|ELW10480.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1781]
gi|444642183|gb|ELW15387.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1762]
gi|444651734|gb|ELW24530.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA35]
gi|444657008|gb|ELW29510.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4880]
gi|444666687|gb|ELW38747.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0670]
gi|449313574|gb|EMD03779.1| ATP-dependent DNA helicase RecQ [Escherichia coli O08]
gi|449314202|gb|EMD04376.1| ATP-dependent DNA helicase RecQ [Escherichia coli S17]
Length = 609
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|301025732|ref|ZP_07189247.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 69-1]
gi|419918818|ref|ZP_14436995.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD2]
gi|300395855|gb|EFJ79393.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 69-1]
gi|388389458|gb|EIL50989.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD2]
Length = 611
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|15804414|ref|NP_290454.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EDL933]
gi|15834006|ref|NP_312779.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
Sakai]
gi|26250563|ref|NP_756603.1| ATP-dependent DNA helicase RecQ [Escherichia coli CFT073]
gi|91213348|ref|YP_543334.1| ATP-dependent DNA helicase RecQ [Escherichia coli UTI89]
gi|117626081|ref|YP_859404.1| ATP-dependent DNA helicase RecQ [Escherichia coli APEC O1]
gi|168750361|ref|ZP_02775383.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4113]
gi|168753724|ref|ZP_02778731.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4401]
gi|168763952|ref|ZP_02788959.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4501]
gi|168768108|ref|ZP_02793115.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4486]
gi|168775622|ref|ZP_02800629.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4196]
gi|168780726|ref|ZP_02805733.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4076]
gi|168786665|ref|ZP_02811672.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC869]
gi|168801109|ref|ZP_02826116.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC508]
gi|193065720|ref|ZP_03046785.1| ATP-dependent DNA helicase RecQ [Escherichia coli E22]
gi|193068067|ref|ZP_03049032.1| ATP-dependent DNA helicase RecQ [Escherichia coli E110019]
gi|194434028|ref|ZP_03066298.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1012]
gi|195938114|ref|ZP_03083496.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4024]
gi|208806062|ref|ZP_03248399.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4206]
gi|208812810|ref|ZP_03254139.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4045]
gi|208821321|ref|ZP_03261641.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4042]
gi|209400089|ref|YP_002273341.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4115]
gi|217325284|ref|ZP_03441368.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
TW14588]
gi|227888592|ref|ZP_04006397.1| ATP-dependent DNA helicase RecQ [Escherichia coli 83972]
gi|237702832|ref|ZP_04533313.1| ATP-dependent DNA helicase recQ [Escherichia sp. 3_2_53FAA]
gi|261225598|ref|ZP_05939879.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255644|ref|ZP_05948177.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
FRIK966]
gi|291285239|ref|YP_003502057.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
CB9615]
gi|300818704|ref|ZP_07098911.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 107-1]
gi|300939956|ref|ZP_07154585.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 21-1]
gi|300950413|ref|ZP_07164336.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 116-1]
gi|300955172|ref|ZP_07167569.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 175-1]
gi|300985659|ref|ZP_07177546.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 45-1]
gi|301029039|ref|ZP_07192192.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 196-1]
gi|301047295|ref|ZP_07194381.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 185-1]
gi|301328411|ref|ZP_07221497.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 78-1]
gi|301646111|ref|ZP_07246011.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 146-1]
gi|306815139|ref|ZP_07449292.1| ATP-dependent DNA helicase RecQ [Escherichia coli NC101]
gi|331644555|ref|ZP_08345675.1| ATP-dependent DNA helicase RecQ [Escherichia coli H736]
gi|331655508|ref|ZP_08356501.1| ATP-dependent DNA helicase RecQ [Escherichia coli M718]
gi|331665474|ref|ZP_08366373.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA143]
gi|331675289|ref|ZP_08376040.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA280]
gi|332282668|ref|ZP_08395081.1| ATP-dependent DNA helicase recQ [Shigella sp. D9]
gi|386597646|ref|YP_006094046.1| RecQ familyATP-dependent DNA helicase [Escherichia coli DH1]
gi|386606401|ref|YP_006112701.1| ATP-dependent DNA helicase RecQ [Escherichia coli UM146]
gi|386626719|ref|YP_006146447.1| ATP-dependent DNA helicase [Escherichia coli O7:K1 str. CE10]
gi|386631763|ref|YP_006151483.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D
i2']
gi|386636683|ref|YP_006156402.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D
i14']
gi|387619114|ref|YP_006122136.1| ATP-dependent DNA helicase RecQ [Escherichia coli O83:H1 str. NRG
857C]
gi|387623474|ref|YP_006131102.1| ATP-dependent DNA helicase RecQ [Escherichia coli DH1]
gi|387885050|ref|YP_006315352.1| ATP-dependent DNA helicase RecQ [Escherichia coli Xuzhou21]
gi|415875441|ref|ZP_11542196.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 79-10]
gi|416261809|ref|ZP_11640557.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae CDC 74-1112]
gi|416284789|ref|ZP_11647410.1| ATP-dependent DNA helicase RecQ [Shigella boydii ATCC 9905]
gi|416307593|ref|ZP_11654634.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
1044]
gi|416319727|ref|ZP_11662279.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC1212]
gi|416326935|ref|ZP_11667010.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
1125]
gi|416778771|ref|ZP_11876102.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
G5101]
gi|416790129|ref|ZP_11880995.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str.
493-89]
gi|416801903|ref|ZP_11885883.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str. H
2687]
gi|416812763|ref|ZP_11890805.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
3256-97]
gi|416823216|ref|ZP_11895422.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str. USDA
5905]
gi|416833537|ref|ZP_11900417.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
LSU-61]
gi|417087782|ref|ZP_11954640.1| ATP-dependent DNA helicase RecQ [Escherichia coli cloneA_i1]
gi|417125722|ref|ZP_11973683.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0246]
gi|417135031|ref|ZP_11979816.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0588]
gi|417156682|ref|ZP_11994306.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0497]
gi|417169247|ref|ZP_12001502.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0741]
gi|417249485|ref|ZP_12041269.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0967]
gi|417265179|ref|ZP_12052558.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.3916]
gi|417273258|ref|ZP_12060605.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.4168]
gi|417279255|ref|ZP_12066565.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2303]
gi|417293640|ref|ZP_12080919.1| ATP-dependent DNA helicase RecQ [Escherichia coli B41]
gi|417296259|ref|ZP_12083506.1| ATP-dependent DNA helicase RecQ [Escherichia coli 900105 (10e)]
gi|417868124|ref|ZP_12513155.1| hypothetical protein C22711_5047 [Escherichia coli O104:H4 str.
C227-11]
gi|418040283|ref|ZP_12678529.1| ATP-dependent DNA helicase RecQ [Escherichia coli W26]
gi|418960294|ref|ZP_13512185.1| ATP-dependent DNA helicase RecQ [Escherichia coli J53]
gi|419804829|ref|ZP_14329980.1| ATP-dependent DNA helicase RecQ [Escherichia coli AI27]
gi|419926606|ref|ZP_14444357.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-1]
gi|419943310|ref|ZP_14459870.1| ATP-dependent DNA helicase RecQ [Escherichia coli HM605]
gi|421777493|ref|ZP_16214088.1| ATP-dependent DNA helicase RecQ [Escherichia coli AD30]
gi|422361452|ref|ZP_16442074.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 110-3]
gi|422364103|ref|ZP_16444631.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 153-1]
gi|422752068|ref|ZP_16805973.1| ATP-dependent DNA helicase RecQ [Escherichia coli H252]
gi|422757541|ref|ZP_16811359.1| ATP-dependent DNA helicase RecQ [Escherichia coli H263]
gi|422764373|ref|ZP_16818123.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1167]
gi|422773902|ref|ZP_16827583.1| ATP-dependent DNA helicase RecQ [Escherichia coli E482]
gi|422818975|ref|ZP_16867187.1| ATP-dependent DNA helicase recQ [Escherichia coli M919]
gi|422836240|ref|ZP_16884288.1| ATP-dependent DNA helicase recQ [Escherichia coli E101]
gi|422842112|ref|ZP_16890078.1| ATP-dependent DNA helicase recQ [Escherichia coli H397]
gi|422963299|ref|ZP_16973143.1| ATP-dependent DNA helicase recQ [Escherichia coli H494]
gi|422990089|ref|ZP_16980861.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C227-11]
gi|422996987|ref|ZP_16987749.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C236-11]
gi|423002081|ref|ZP_16992833.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
09-7901]
gi|423005737|ref|ZP_16996482.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
04-8351]
gi|423012298|ref|ZP_17003030.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-3677]
gi|423021529|ref|ZP_17012234.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4404]
gi|423026687|ref|ZP_17017381.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4522]
gi|423032514|ref|ZP_17023200.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4623]
gi|423035353|ref|ZP_17026030.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423040509|ref|ZP_17031178.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423047194|ref|ZP_17037853.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423055733|ref|ZP_17044539.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423057736|ref|ZP_17046535.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423703345|ref|ZP_17677777.1| ATP-dependent DNA helicase recQ [Escherichia coli H730]
gi|427807018|ref|ZP_18974085.1| ATP-dependent DNA helicase [Escherichia coli chi7122]
gi|427811606|ref|ZP_18978671.1| ATP-dependent DNA helicase [Escherichia coli]
gi|429721569|ref|ZP_19256483.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429773463|ref|ZP_19305477.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02030]
gi|429778828|ref|ZP_19310793.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02033-1]
gi|429782663|ref|ZP_19314587.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02092]
gi|429788056|ref|ZP_19319942.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02093]
gi|429794495|ref|ZP_19326335.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02281]
gi|429800455|ref|ZP_19332243.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02318]
gi|429804067|ref|ZP_19335823.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02913]
gi|429808715|ref|ZP_19340430.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03439]
gi|429814414|ref|ZP_19346084.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-04080]
gi|429819617|ref|ZP_19351246.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03943]
gi|429905937|ref|ZP_19371912.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910070|ref|ZP_19376031.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429915970|ref|ZP_19381915.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921018|ref|ZP_19386944.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429926826|ref|ZP_19392736.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429930757|ref|ZP_19396656.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429937299|ref|ZP_19403184.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429942978|ref|ZP_19408849.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429945657|ref|ZP_19411516.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429953220|ref|ZP_19419064.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429956566|ref|ZP_19422396.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432360276|ref|ZP_19603487.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE4]
gi|432365076|ref|ZP_19608229.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE5]
gi|432367297|ref|ZP_19610409.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE10]
gi|432383719|ref|ZP_19626643.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE15]
gi|432389627|ref|ZP_19632505.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE16]
gi|432394491|ref|ZP_19637307.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE21]
gi|432414086|ref|ZP_19656738.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE39]
gi|432419345|ref|ZP_19661934.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE44]
gi|432434048|ref|ZP_19676469.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE187]
gi|432438779|ref|ZP_19681155.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE188]
gi|432443352|ref|ZP_19685684.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE189]
gi|432448496|ref|ZP_19690791.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE191]
gi|432452089|ref|ZP_19694343.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE193]
gi|432458964|ref|ZP_19701137.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE201]
gi|432483235|ref|ZP_19725182.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE210]
gi|432487578|ref|ZP_19729484.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE212]
gi|432493074|ref|ZP_19734902.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE214]
gi|432506714|ref|ZP_19748431.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE220]
gi|432516211|ref|ZP_19753425.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE224]
gi|432526295|ref|ZP_19763406.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE230]
gi|432528681|ref|ZP_19765751.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE233]
gi|432571096|ref|ZP_19807600.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE53]
gi|432576067|ref|ZP_19812534.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE55]
gi|432578095|ref|ZP_19814540.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE56]
gi|432590276|ref|ZP_19826626.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE58]
gi|432595035|ref|ZP_19831345.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE60]
gi|432600079|ref|ZP_19836347.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE62]
gi|432605259|ref|ZP_19841468.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE67]
gi|432613825|ref|ZP_19849981.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE72]
gi|432629445|ref|ZP_19865409.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE77]
gi|432634727|ref|ZP_19870624.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE81]
gi|432648493|ref|ZP_19884277.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE86]
gi|432653476|ref|ZP_19889212.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE87]
gi|432658058|ref|ZP_19893754.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE93]
gi|432663070|ref|ZP_19898697.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE111]
gi|432672915|ref|ZP_19908432.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE119]
gi|432677001|ref|ZP_19912440.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE142]
gi|432687652|ref|ZP_19922939.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE156]
gi|432689149|ref|ZP_19924414.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE161]
gi|432701337|ref|ZP_19936480.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE169]
gi|432706554|ref|ZP_19941647.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE171]
gi|432739319|ref|ZP_19974046.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE42]
gi|432747796|ref|ZP_19982457.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE43]
gi|432752279|ref|ZP_19986855.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE29]
gi|432756779|ref|ZP_19991322.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE22]
gi|432768201|ref|ZP_20002590.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE50]
gi|432780984|ref|ZP_20015199.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE59]
gi|432785808|ref|ZP_20019983.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE63]
gi|432789848|ref|ZP_20023974.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE65]
gi|432795081|ref|ZP_20029152.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE78]
gi|432796592|ref|ZP_20030625.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE79]
gi|432808068|ref|ZP_20041980.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE91]
gi|432818612|ref|ZP_20052333.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE118]
gi|432824744|ref|ZP_20058407.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE123]
gi|432847043|ref|ZP_20079554.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE141]
gi|432866699|ref|ZP_20089036.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE146]
gi|432878187|ref|ZP_20095636.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE154]
gi|432907645|ref|ZP_20116028.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE194]
gi|432931567|ref|ZP_20131599.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE184]
gi|432940641|ref|ZP_20138542.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE183]
gi|432943514|ref|ZP_20140349.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE196]
gi|432951080|ref|ZP_20144823.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE197]
gi|432964632|ref|ZP_20153702.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE202]
gi|432974095|ref|ZP_20162937.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE207]
gi|432976046|ref|ZP_20164877.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE209]
gi|432987668|ref|ZP_20176378.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE215]
gi|432997605|ref|ZP_20186184.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE218]
gi|433002200|ref|ZP_20190717.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE223]
gi|433002724|ref|ZP_20191232.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE227]
gi|433010024|ref|ZP_20198434.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE229]
gi|433016140|ref|ZP_20204466.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE104]
gi|433025731|ref|ZP_20213696.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE106]
gi|433035751|ref|ZP_20223437.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE112]
gi|433040839|ref|ZP_20228423.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE113]
gi|433045355|ref|ZP_20232827.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE117]
gi|433050297|ref|ZP_20237614.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE120]
gi|433060346|ref|ZP_20247376.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE124]
gi|433065296|ref|ZP_20252196.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE125]
gi|433084749|ref|ZP_20271193.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE133]
gi|433089549|ref|ZP_20275906.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE137]
gi|433103420|ref|ZP_20289488.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE145]
gi|433117753|ref|ZP_20303531.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE153]
gi|433127456|ref|ZP_20312995.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE160]
gi|433132402|ref|ZP_20317821.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE163]
gi|433137074|ref|ZP_20322396.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE166]
gi|433141529|ref|ZP_20326765.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE167]
gi|433146459|ref|ZP_20331588.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE168]
gi|433151482|ref|ZP_20336476.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE174]
gi|433156014|ref|ZP_20340937.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE176]
gi|433165840|ref|ZP_20350564.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE179]
gi|433170836|ref|ZP_20355450.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE180]
gi|433175714|ref|ZP_20360216.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE232]
gi|433190628|ref|ZP_20374713.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE88]
gi|433195880|ref|ZP_20379845.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE90]
gi|433200586|ref|ZP_20384466.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE94]
gi|433209973|ref|ZP_20393634.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE97]
gi|433214852|ref|ZP_20398424.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE99]
gi|442591349|ref|ZP_21009834.1| ATP-dependent DNA helicase RecQ [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|442603448|ref|ZP_21018338.1| ATP-dependent DNA helicase RecQ [Escherichia coli Nissle 1917]
gi|452967363|ref|ZP_21965590.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4009]
gi|12518696|gb|AAG59018.1|AE005613_11 ATP-dependent DNA helicase [Escherichia coli O157:H7 str. EDL933]
gi|26110993|gb|AAN83177.1|AE016769_292 ATP-dependent DNA helicase recQ [Escherichia coli CFT073]
gi|13364228|dbj|BAB38175.1| ATP-dependent DNA helicase [Escherichia coli O157:H7 str. Sakai]
gi|91074922|gb|ABE09803.1| ATP-dependent DNA helicase [Escherichia coli UTI89]
gi|115515205|gb|ABJ03280.1| ATP-dependent DNA helicase [Escherichia coli APEC O1]
gi|187768838|gb|EDU32682.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4196]
gi|188015421|gb|EDU53543.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4113]
gi|189001596|gb|EDU70582.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4076]
gi|189358975|gb|EDU77394.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4401]
gi|189362723|gb|EDU81142.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4486]
gi|189365963|gb|EDU84379.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4501]
gi|189373237|gb|EDU91653.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC869]
gi|189376685|gb|EDU95101.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC508]
gi|192926687|gb|EDV81316.1| ATP-dependent DNA helicase RecQ [Escherichia coli E22]
gi|192958687|gb|EDV89125.1| ATP-dependent DNA helicase RecQ [Escherichia coli E110019]
gi|194417686|gb|EDX33785.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1012]
gi|208725863|gb|EDZ75464.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4206]
gi|208734087|gb|EDZ82774.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4045]
gi|208741444|gb|EDZ89126.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4042]
gi|209161489|gb|ACI38922.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4115]
gi|209753168|gb|ACI74891.1| threonine efflux protein [Escherichia coli]
gi|209753170|gb|ACI74892.1| threonine efflux protein [Escherichia coli]
gi|209753172|gb|ACI74893.1| threonine efflux protein [Escherichia coli]
gi|209753174|gb|ACI74894.1| threonine efflux protein [Escherichia coli]
gi|209753176|gb|ACI74895.1| threonine efflux protein [Escherichia coli]
gi|217321505|gb|EEC29929.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
TW14588]
gi|226903003|gb|EEH89262.1| ATP-dependent DNA helicase recQ [Escherichia sp. 3_2_53FAA]
gi|227834431|gb|EEJ44897.1| ATP-dependent DNA helicase RecQ [Escherichia coli 83972]
gi|260451335|gb|ACX41757.1| ATP-dependent DNA helicase, RecQ family [Escherichia coli DH1]
gi|290765112|gb|ADD59073.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
CB9615]
gi|299878002|gb|EFI86213.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 196-1]
gi|300300814|gb|EFJ57199.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 185-1]
gi|300317889|gb|EFJ67673.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 175-1]
gi|300408043|gb|EFJ91581.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 45-1]
gi|300450259|gb|EFK13879.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 116-1]
gi|300455218|gb|EFK18711.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 21-1]
gi|300528670|gb|EFK49732.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 107-1]
gi|300845161|gb|EFK72921.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 78-1]
gi|301075637|gb|EFK90443.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 146-1]
gi|305851508|gb|EFM51962.1| ATP-dependent DNA helicase RecQ [Escherichia coli NC101]
gi|307628885|gb|ADN73189.1| ATP-dependent DNA helicase RecQ [Escherichia coli UM146]
gi|312948375|gb|ADR29202.1| ATP-dependent DNA helicase RecQ [Escherichia coli O83:H1 str. NRG
857C]
gi|315138398|dbj|BAJ45557.1| ATP-dependent DNA helicase RecQ [Escherichia coli DH1]
gi|315284755|gb|EFU44200.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 110-3]
gi|315293200|gb|EFU52552.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 153-1]
gi|320176754|gb|EFW51788.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae CDC 74-1112]
gi|320179831|gb|EFW54778.1| ATP-dependent DNA helicase RecQ [Shigella boydii ATCC 9905]
gi|320191083|gb|EFW65733.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC1212]
gi|320639307|gb|EFX08929.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
G5101]
gi|320644692|gb|EFX13742.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str.
493-89]
gi|320650017|gb|EFX18520.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str. H
2687]
gi|320655364|gb|EFX23306.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660989|gb|EFX28432.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str. USDA
5905]
gi|320666113|gb|EFX33127.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
LSU-61]
gi|323938957|gb|EGB35176.1| ATP-dependent DNA helicase RecQ [Escherichia coli E482]
gi|323949294|gb|EGB45184.1| ATP-dependent DNA helicase RecQ [Escherichia coli H252]
gi|323954029|gb|EGB49827.1| ATP-dependent DNA helicase RecQ [Escherichia coli H263]
gi|324115715|gb|EGC09650.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1167]
gi|326344280|gb|EGD68040.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
1125]
gi|326347892|gb|EGD71606.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
1044]
gi|331036227|gb|EGI08462.1| ATP-dependent DNA helicase RecQ [Escherichia coli H736]
gi|331046829|gb|EGI18913.1| ATP-dependent DNA helicase RecQ [Escherichia coli M718]
gi|331057372|gb|EGI29361.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA143]
gi|331067575|gb|EGI38979.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA280]
gi|332105020|gb|EGJ08366.1| ATP-dependent DNA helicase recQ [Shigella sp. D9]
gi|341921413|gb|EGT71013.1| hypothetical protein C22711_5047 [Escherichia coli O104:H4 str.
C227-11]
gi|342929411|gb|EGU98133.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 79-10]
gi|349740455|gb|AEQ15161.1| ATP-dependent DNA helicase [Escherichia coli O7:K1 str. CE10]
gi|354857604|gb|EHF18058.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C236-11]
gi|354861156|gb|EHF21596.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C227-11]
gi|354862964|gb|EHF23400.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
04-8351]
gi|354870560|gb|EHF30963.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
09-7901]
gi|354876413|gb|EHF36774.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-3677]
gi|354885260|gb|EHF45564.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4404]
gi|354888660|gb|EHF48915.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4522]
gi|354892140|gb|EHF52353.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4623]
gi|354904405|gb|EHF64498.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354907666|gb|EHF67724.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354910042|gb|EHF70071.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354912556|gb|EHF72556.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354920351|gb|EHF80286.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C5]
gi|355349511|gb|EHF98716.1| ATP-dependent DNA helicase RecQ [Escherichia coli cloneA_i1]
gi|355422662|gb|AER86859.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D
i2']
gi|355427582|gb|AER91778.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D
i14']
gi|371591795|gb|EHN80734.1| ATP-dependent DNA helicase recQ [Escherichia coli H494]
gi|371602176|gb|EHN90887.1| ATP-dependent DNA helicase recQ [Escherichia coli H397]
gi|371609589|gb|EHN98126.1| ATP-dependent DNA helicase recQ [Escherichia coli E101]
gi|383476777|gb|EID68710.1| ATP-dependent DNA helicase RecQ [Escherichia coli W26]
gi|384376901|gb|EIE34801.1| ATP-dependent DNA helicase RecQ [Escherichia coli J53]
gi|384472213|gb|EIE56273.1| ATP-dependent DNA helicase RecQ [Escherichia coli AI27]
gi|385537533|gb|EIF84404.1| ATP-dependent DNA helicase recQ [Escherichia coli M919]
gi|385708484|gb|EIG45496.1| ATP-dependent DNA helicase recQ [Escherichia coli H730]
gi|386145721|gb|EIG92178.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0246]
gi|386152885|gb|EIH04174.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0588]
gi|386165432|gb|EIH31952.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0497]
gi|386170387|gb|EIH42447.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0741]
gi|386219806|gb|EII36270.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0967]
gi|386221361|gb|EII43805.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.3916]
gi|386234435|gb|EII66413.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.4168]
gi|386238032|gb|EII74972.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2303]
gi|386251828|gb|EIJ01520.1| ATP-dependent DNA helicase RecQ [Escherichia coli B41]
gi|386259703|gb|EIJ15177.1| ATP-dependent DNA helicase RecQ [Escherichia coli 900105 (10e)]
gi|386798508|gb|AFJ31542.1| ATP-dependent DNA helicase RecQ [Escherichia coli Xuzhou21]
gi|388409130|gb|EIL69452.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-1]
gi|388421322|gb|EIL80939.1| ATP-dependent DNA helicase RecQ [Escherichia coli HM605]
gi|408457407|gb|EKJ81203.1| ATP-dependent DNA helicase RecQ [Escherichia coli AD30]
gi|412965200|emb|CCK49130.1| ATP-dependent DNA helicase [Escherichia coli chi7122]
gi|412971785|emb|CCJ46450.1| ATP-dependent DNA helicase [Escherichia coli]
gi|429355564|gb|EKY92252.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02030]
gi|429355754|gb|EKY92439.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02033-1]
gi|429357134|gb|EKY93808.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02092]
gi|429371198|gb|EKZ07757.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02093]
gi|429371402|gb|EKZ07959.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02281]
gi|429375432|gb|EKZ11967.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02318]
gi|429387228|gb|EKZ23670.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02913]
gi|429389790|gb|EKZ26209.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03439]
gi|429390496|gb|EKZ26908.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03943]
gi|429400930|gb|EKZ37241.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-04080]
gi|429401897|gb|EKZ38191.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429404472|gb|EKZ40747.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429412703|gb|EKZ48894.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429415644|gb|EKZ51805.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429422963|gb|EKZ59072.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429427510|gb|EKZ63592.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429431815|gb|EKZ67858.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429439320|gb|EKZ75307.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429443687|gb|EKZ79637.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429448312|gb|EKZ84227.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429454076|gb|EKZ89941.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429458539|gb|EKZ94363.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430873088|gb|ELB96667.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE4]
gi|430883034|gb|ELC06041.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE5]
gi|430890837|gb|ELC13397.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE10]
gi|430903003|gb|ELC24748.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE16]
gi|430903107|gb|ELC24851.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE15]
gi|430913882|gb|ELC35001.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE21]
gi|430932536|gb|ELC52957.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE39]
gi|430935905|gb|ELC56200.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE44]
gi|430949889|gb|ELC69284.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE187]
gi|430959658|gb|ELC77969.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE188]
gi|430962773|gb|ELC80625.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE189]
gi|430970881|gb|ELC87926.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE191]
gi|430977239|gb|ELC94090.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE193]
gi|430978984|gb|ELC95773.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE201]
gi|431003540|gb|ELD19023.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE210]
gi|431013410|gb|ELD27143.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE212]
gi|431030698|gb|ELD43704.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE214]
gi|431034609|gb|ELD46535.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE220]
gi|431037921|gb|ELD48891.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE224]
gi|431047355|gb|ELD57356.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE230]
gi|431059796|gb|ELD69143.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE233]
gi|431096876|gb|ELE02331.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE53]
gi|431104206|gb|ELE08809.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE55]
gi|431111518|gb|ELE15417.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE56]
gi|431117383|gb|ELE20622.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE58]
gi|431125535|gb|ELE27937.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE60]
gi|431127306|gb|ELE29608.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE62]
gi|431144281|gb|ELE45988.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE67]
gi|431146062|gb|ELE47661.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE72]
gi|431160135|gb|ELE60653.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE77]
gi|431175867|gb|ELE75854.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE81]
gi|431177503|gb|ELE77427.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE86]
gi|431186593|gb|ELE86133.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE87]
gi|431188169|gb|ELE87668.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE93]
gi|431196510|gb|ELE95436.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE111]
gi|431207204|gb|ELF05474.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE119]
gi|431209667|gb|ELF07738.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE142]
gi|431218899|gb|ELF16324.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE156]
gi|431234396|gb|ELF29797.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE161]
gi|431239716|gb|ELF34188.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE169]
gi|431239876|gb|ELF34342.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE171]
gi|431278992|gb|ELF69963.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE42]
gi|431289696|gb|ELF80437.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE43]
gi|431293209|gb|ELF83589.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE29]
gi|431299667|gb|ELF89238.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE22]
gi|431321465|gb|ELG09066.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE50]
gi|431323834|gb|ELG11300.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE59]
gi|431325714|gb|ELG13095.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE63]
gi|431335017|gb|ELG22161.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE65]
gi|431335488|gb|ELG22626.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE78]
gi|431347763|gb|ELG34641.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE79]
gi|431352550|gb|ELG39319.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE91]
gi|431373433|gb|ELG59039.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE118]
gi|431377686|gb|ELG62812.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE123]
gi|431392085|gb|ELG75688.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE141]
gi|431400822|gb|ELG84186.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE146]
gi|431417427|gb|ELG99890.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE154]
gi|431427140|gb|ELH09183.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE194]
gi|431459357|gb|ELH39670.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE184]
gi|431459691|gb|ELH39983.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE183]
gi|431466733|gb|ELH46750.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE196]
gi|431467349|gb|ELH47359.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE202]
gi|431477546|gb|ELH57314.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE197]
gi|431478399|gb|ELH58147.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE207]
gi|431485180|gb|ELH64844.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE209]
gi|431493841|gb|ELH73433.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE215]
gi|431501796|gb|ELH80772.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE218]
gi|431504472|gb|ELH83098.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE223]
gi|431520867|gb|ELH98186.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE229]
gi|431521765|gb|ELH99004.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE227]
gi|431526226|gb|ELI02985.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE104]
gi|431530167|gb|ELI06852.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE106]
gi|431545604|gb|ELI20252.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE112]
gi|431547922|gb|ELI22215.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE113]
gi|431551988|gb|ELI25951.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE117]
gi|431561551|gb|ELI34918.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE120]
gi|431565593|gb|ELI38672.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE124]
gi|431577598|gb|ELI50229.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE125]
gi|431597335|gb|ELI67242.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE133]
gi|431600495|gb|ELI70165.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE137]
gi|431615751|gb|ELI84873.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE145]
gi|431630352|gb|ELI98689.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE153]
gi|431639691|gb|ELJ07541.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE160]
gi|431642027|gb|ELJ09753.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE163]
gi|431653007|gb|ELJ20124.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE166]
gi|431655382|gb|ELJ22415.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE167]
gi|431657099|gb|ELJ24067.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE168]
gi|431666796|gb|ELJ33421.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE174]
gi|431669744|gb|ELJ36113.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE176]
gi|431683122|gb|ELJ48761.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE179]
gi|431683735|gb|ELJ49363.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE180]
gi|431687667|gb|ELJ53211.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE232]
gi|431701585|gb|ELJ66500.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE88]
gi|431712921|gb|ELJ77188.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE90]
gi|431716632|gb|ELJ80739.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE94]
gi|431727917|gb|ELJ91647.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE97]
gi|431731295|gb|ELJ94801.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE99]
gi|441608587|emb|CCP95671.1| ATP-dependent DNA helicase RecQ [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|441715872|emb|CCQ04315.1| ATP-dependent DNA helicase RecQ [Escherichia coli Nissle 1917]
Length = 611
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|145637733|ref|ZP_01793385.1| organic solvent tolerance protein [Haemophilus influenzae PittHH]
gi|145269082|gb|EDK09033.1| organic solvent tolerance protein [Haemophilus influenzae PittHH]
Length = 619
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 234/348 (67%), Gaps = 13/348 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD ++F
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYTWLQKILF 356
>gi|308801525|ref|XP_003078076.1| DNA helicase isolog (ISS) [Ostreococcus tauri]
gi|116056527|emb|CAL52816.1| DNA helicase isolog (ISS) [Ostreococcus tauri]
Length = 1174
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 237/384 (61%), Gaps = 20/384 (5%)
Query: 66 VENWSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQ 124
++W T F W N F ++R+ Q +NA ++ RD LV+M GGGKSLCYQ
Sbjct: 325 AKDWDHTNFAWSKLIQQTLRNTFNAKSFRSLQLLAVNATMAARDCLVLMPTGGGKSLCYQ 384
Query: 125 LPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
LPAV++ G+ +V+SPL+SLIQDQ+ L+ +GIPA +L++ +KE + IY L EL
Sbjct: 385 LPAVVKPGVTVVISPLISLIQDQLHHLSEMGIPATVLSA--AKESDNSIYDDLRSSTPEL 442
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++LYVTPEK+ +S + + L++ + L+ +DEAHC S WGHDFR DY L LK
Sbjct: 443 RLLYVTPEKVVRSGKLKTALQRLYERNMLNRFVLDEAHCISAWGHDFRKDYTELRGLKHL 502
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
FP P+M LTATAT++VQ+D++ L++ KC++F T NR NL Y V K GK +I EI
Sbjct: 503 FPTTPIMCLTATATRRVQDDIVRQLNLPKCLRFFDTFNRTNLTYEVHPKLK-GKQMISEI 561
Query: 305 AKYIQE----SYPNSESGIVYCFSRKECEQVAQELRQ------------RGISADYYHAD 348
I + + GI+YCFS+ +CE++A EL + + + A YHA
Sbjct: 562 KDVIVKRGLMRNKRVQCGIIYCFSQADCEKIASELNKVDRSAGDHTRFPKRLKAVPYHAG 621
Query: 349 MDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGR 408
+ R+K W ++++ +I TVAFGMGINKP+VRFV HHS+ KS+E Y+QESGRAGR
Sbjct: 622 LPEATRKKHQEMWQRDEVNIICATVAFGMGINKPNVRFVFHHSMPKSLEAYHQESGRAGR 681
Query: 409 DGLPSECLLFFRPADVPRQSSMVF 432
DG C+LF+ D + SM+
Sbjct: 682 DGEHGLCILFYSWGDASKARSMLM 705
>gi|300904077|ref|ZP_07121957.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 84-1]
gi|301303719|ref|ZP_07209840.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 124-1]
gi|415865367|ref|ZP_11538229.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 85-1]
gi|300403957|gb|EFJ87495.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 84-1]
gi|300841019|gb|EFK68779.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 124-1]
gi|315254188|gb|EFU34156.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 85-1]
Length = 611
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILFYDPADM 347
>gi|445053267|ref|ZP_21368273.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0083]
gi|444659629|gb|ELW32037.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0083]
Length = 603
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 4 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 63
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 64 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 121
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 122 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 176
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 177 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 230
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 231 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 290
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 291 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 339
>gi|300917877|ref|ZP_07134511.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 115-1]
gi|432531614|ref|ZP_19768636.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE234]
gi|300414922|gb|EFJ98232.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 115-1]
gi|431066937|gb|ELD75555.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE234]
Length = 611
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRTKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|229845776|ref|ZP_04465888.1| frataxin-like protein [Haemophilus influenzae 7P49H1]
gi|229810780|gb|EEP46497.1| frataxin-like protein [Haemophilus influenzae 7P49H1]
Length = 619
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 234/348 (67%), Gaps = 13/348 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD ++F
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILF 356
>gi|238798601|ref|ZP_04642077.1| ATP-dependent DNA helicase recQ [Yersinia mollaretii ATCC 43969]
gi|238717557|gb|EEQ09397.1| ATP-dependent DNA helicase recQ [Yersinia mollaretii ATCC 43969]
Length = 610
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 239/349 (68%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V + FG +R QQEIINA LSG+D LV+M GGGKSLCYQ+PA++ +G+ L
Sbjct: 10 ESLAVQVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTL 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLV 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ +L H R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FP++P++ALTA
Sbjct: 128 MES-FLDQL----HQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPNLPVIALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + + D++ +L++ + + VS+ +RPN+ Y + EK +D++ +++Q+
Sbjct: 183 TADEATRGDIVRLLNLDQPLIQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E L+ RG+S YHA +D R +V + ++ LQV+V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADM 345
>gi|418259306|ref|ZP_12882257.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 6603-63]
gi|397894450|gb|EJL10892.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 6603-63]
Length = 609
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD L +M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLAVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|432855825|ref|ZP_20083516.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE144]
gi|431397110|gb|ELG80571.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE144]
Length = 611
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLTHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|419926481|ref|ZP_14444247.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-15]
gi|388382669|gb|EIL44516.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-15]
Length = 611
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|88603641|ref|YP_503819.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
gi|88189103|gb|ABD42100.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
Length = 606
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 166/376 (44%), Positives = 250/376 (66%), Gaps = 19/376 (5%)
Query: 80 DDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSP 139
+DV FG YR Q+EII VL GRDVL ++A GGGKSLCYQ+PA++R+G+ +V+SP
Sbjct: 9 EDVLHRWFGYRTYRPGQKEIITHVLEGRDVLAVIATGGGKSLCYQIPALIRDGVGIVISP 68
Query: 140 LLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKR 199
L++L++DQV CLA GIPA L ST +D++ I ++ +G LK+LY++PE++ +
Sbjct: 69 LIALMKDQVDCLAESGIPAAFLNSTQDVKDKRSIEGSIL--DGSLKLLYISPERLVQPS- 125
Query: 200 FMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQ 259
F+ L+ + R+SL +IDEAHC SQWGH+FRP+Y+ L I++ F DVP++ALTATAT
Sbjct: 126 FIEFLK----STRISLFAIDEAHCISQWGHEFRPEYRKLSIIRRTFADVPIIALTATATP 181
Query: 260 KVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGI 319
V++D++ L + FV + NR NL Y + +K + ++ + + +ESGI
Sbjct: 182 SVRSDIISELSLHNPAVFVGSFNRENLIYRIVKKEDGEQQLVQFLKSH------QNESGI 235
Query: 320 VYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
VYCFS+++ +A+ L++ G SA YHAD+ + R + R+ ++++++IV TVAFGMGI
Sbjct: 236 VYCFSKRQVTDLARVLQKNGFSALPYHADLPKSVRHETQDRFLRDEVRIIVATVAFGMGI 295
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-- 437
NKPDVRFV+H L K++E YYQE+GRAGRDG P+ECLL + D + ++ G
Sbjct: 296 NKPDVRFVVHFDLPKNLEHYYQETGRAGRDGDPAECLLLYSRGDFRKIEYLIEQMAEGTE 355
Query: 438 ----LQNLYDIVRYSQ 449
L+ L+++V Y +
Sbjct: 356 RQVSLRKLHEMVGYCE 371
>gi|68249329|ref|YP_248441.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae 86-028NP]
gi|229844599|ref|ZP_04464738.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae 6P18H1]
gi|68057528|gb|AAX87781.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae 86-028NP]
gi|229812313|gb|EEP48003.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae 6P18H1]
Length = 619
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 234/348 (67%), Gaps = 13/348 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQKD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD ++F
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILF 356
>gi|148221|gb|AAA67618.1| DNA-dependent ATPase, DNA helicase [Escherichia coli str. K-12
substr. MG1655]
Length = 610
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAAALQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|147559|gb|AAA24517.1| recQ [Escherichia coli]
Length = 610
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAAALQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|322834919|ref|YP_004214946.1| ATP-dependent DNA helicase RecQ [Rahnella sp. Y9602]
gi|384260143|ref|YP_005404077.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis HX2]
gi|321170120|gb|ADW75819.1| ATP-dependent DNA helicase RecQ [Rahnella sp. Y9602]
gi|380756119|gb|AFE60510.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis HX2]
Length = 610
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 235/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V + FG +R QQ IIN LSGRD LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AHQVLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E + + G +KMLY+ PE++
Sbjct: 73 PLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGR--IKMLYIAPERLMMGD 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L++ + A ++++DEAHC SQWGHDFRP+Y+ LG LK ++P +P++ALTATA
Sbjct: 131 -FLEQLQQWNPA----MLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +ND++ +L + + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 EATRNDIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKP----LDQLIRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA +D + R +V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADM 345
>gi|419863367|ref|ZP_14385906.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H25 str.
CVM9340]
gi|388342947|gb|EIL08948.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H25 str.
CVM9340]
Length = 609
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTVCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|319775328|ref|YP_004137816.1| ATP-dependent DNA helicase [Haemophilus influenzae F3047]
gi|319897768|ref|YP_004135965.1| ATP-dependent DNA helicase [Haemophilus influenzae F3031]
gi|329122676|ref|ZP_08251254.1| ATP-dependent helicase RecQ [Haemophilus aegyptius ATCC 11116]
gi|317433274|emb|CBY81649.1| ATP-dependent DNA helicase [Haemophilus influenzae F3031]
gi|317449919|emb|CBY86131.1| ATP-dependent DNA helicase [Haemophilus influenzae F3047]
gi|327472550|gb|EGF17980.1| ATP-dependent helicase RecQ [Haemophilus aegyptius ATCC 11116]
Length = 619
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 234/348 (67%), Gaps = 13/348 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD ++F
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILF 356
>gi|331649648|ref|ZP_08350730.1| ATP-dependent DNA helicase RecQ [Escherichia coli M605]
gi|331041518|gb|EGI13666.1| ATP-dependent DNA helicase RecQ [Escherichia coli M605]
Length = 609
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDSLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|82546173|ref|YP_410120.1| ATP-dependent DNA helicase RecQ [Shigella boydii Sb227]
gi|416295404|ref|ZP_11651155.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CDC 796-83]
gi|81247584|gb|ABB68292.1| ATP-dependent DNA helicase [Shigella boydii Sb227]
gi|320186210|gb|EFW60949.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CDC 796-83]
Length = 611
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|378696929|ref|YP_005178887.1| ATP-dependent DNA helicase [Haemophilus influenzae 10810]
gi|301169448|emb|CBW29048.1| ATP-dependent DNA helicase [Haemophilus influenzae 10810]
Length = 619
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 234/348 (67%), Gaps = 13/348 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD ++F
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILF 356
>gi|422977416|ref|ZP_16977368.1| ATP-dependent DNA helicase recQ [Escherichia coli TA124]
gi|371593264|gb|EHN82147.1| ATP-dependent DNA helicase recQ [Escherichia coli TA124]
Length = 611
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLDVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|417684666|ref|ZP_12334002.1| ATP-dependent DNA helicase RecQ [Shigella boydii 3594-74]
gi|420327851|ref|ZP_14829589.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CCH060]
gi|420355277|ref|ZP_14856349.1| ATP-dependent DNA helicase RecQ [Shigella boydii 4444-74]
gi|421684822|ref|ZP_16124603.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1485-80]
gi|332088521|gb|EGI93637.1| ATP-dependent DNA helicase RecQ [Shigella boydii 3594-74]
gi|391245516|gb|EIQ04783.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CCH060]
gi|391273146|gb|EIQ31974.1| ATP-dependent DNA helicase RecQ [Shigella boydii 4444-74]
gi|404335343|gb|EJZ61813.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1485-80]
Length = 609
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|417142416|ref|ZP_11984991.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0259]
gi|417310399|ref|ZP_12097213.1| ATP-dependent DNA helicase recQ [Escherichia coli PCN033]
gi|338768042|gb|EGP22848.1| ATP-dependent DNA helicase recQ [Escherichia coli PCN033]
gi|386155440|gb|EIH11795.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0259]
Length = 611
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|405119097|gb|AFR93870.1| ATP-dependent DNA helicase hus2/rqh1 [Cryptococcus neoformans var.
grubii H99]
Length = 934
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 165/353 (46%), Positives = 220/353 (62%), Gaps = 9/353 (2%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR- 130
T W + VF +P +R +Q+E I+ ++G+DV V+M GGGKSL YQLPAV
Sbjct: 89 THPWSKEVNQKLRQVFKLPNFRKHQKEAIDETMAGKDVFVLMPTGGGKSLTYQLPAVCSS 148
Query: 131 ---EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
G+ VVSPL+SLI DQ L + GIPA T ++ D+ ++ L K E K++
Sbjct: 149 GKTRGVTFVVSPLISLINDQTRHLISRGIPAIAYTGDLTQRDKNVAHEELSKREPITKVV 208
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPE +S S L +L+ IDEAHC SQWGHDFR DY LG L+ +P
Sbjct: 209 YVTPEMMSMGGHIKSILRGLLQRKQLARFVIDEAHCVSQWGHDFRADYLRLGELRRDYPG 268
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VP+MALTATA KVQ D++ L I C+ + NRPNL Y VR K+S VI EI +
Sbjct: 269 VPIMALTATAQNKVQEDIIRSLRIEGCVCLRQSFNRPNLHYEVRPKTS---SVIQEIVAF 325
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQ-RGISADYYHADMDINAREKVHMRWSKNKL 366
++ + SGIVYC SR CE +A++LR+ G+ A +YHA M R K+ W +K
Sbjct: 326 VRTQEARA-SGIVYCNSRDNCENLAKKLREDHGLRAYHYHAGMTKENRRKMQEGWQDHKF 384
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+++V T+AFGMGI+KPDVR+VIHH L +S+E YYQE+GRAGRDG PS C+L++
Sbjct: 385 EIMVATIAFGMGIDKPDVRYVIHHHLPRSLEGYYQETGRAGRDGNPSTCILYY 437
>gi|417280748|ref|ZP_12068048.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3003]
gi|386245077|gb|EII86807.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3003]
Length = 611
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWDPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|401626200|gb|EJS44156.1| sgs1p [Saccharomyces arboricola H-6]
Length = 1463
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/350 (43%), Positives = 230/350 (65%), Gaps = 10/350 (2%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLL 141
F +P +R NQ E +NA L+G+DV V+M GGGKSLCYQLPA+++ G +VVSPL+
Sbjct: 686 TFKLPGFRPNQIEAVNATLNGKDVFVLMPTGGGKSLCYQLPALVKSGKTHGTTIVVSPLI 745
Query: 142 SLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFM 201
SL+QDQV L I A M +S + E + + G L ++Y++PE IS S++
Sbjct: 746 SLMQDQVEHLLNKNIKASMFSSKGTAEQRRQTFNLF--INGLLDLVYISPEMISASEQCK 803
Query: 202 SKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKV 261
+ + + G+L+ I +DEAHC S WGHDFRPDYK L K ++PD+PM+ALTATA+++V
Sbjct: 804 RAISRLYTDGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQV 863
Query: 262 QNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVY 321
+ D++ L +++ + + NR NL+Y V++K+ K I EI ++ ++ N ++GI+Y
Sbjct: 864 RMDIIHNLELKEPVFLKQSFNRTNLYYEVKKKT---KNTIFEICDAVKSNFKN-QTGIIY 919
Query: 322 CFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINK 381
C S+K CEQ + ++++ GI YYHA M+ + R V W +++QVI TVAFGMGI+K
Sbjct: 920 CHSKKSCEQTSAQMQKNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDK 979
Query: 382 PDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
PDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+ +M+
Sbjct: 980 PDVRFVYHFTVPRTLEGYYQETGRAGRDGKYSYCITYFSFRDIRTMQTMI 1029
>gi|317494839|ref|ZP_07953250.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917164|gb|EFV38512.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 612
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 157/346 (45%), Positives = 231/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA ++GRD LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQTIINAAIAGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E ++ +Y G +K+LY+ PE++
Sbjct: 73 PLISLMKDQVDQLQANGVSAACLNSTQNREQQQEVYAGCRSGA--IKLLYIAPERLMMDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L + SL+++DEAHC SQWGHDFRP+Y LG++K +FPD+P++ALTATA
Sbjct: 131 -FLDQLPHWNP----SLLAVDEAHCISQWGHDFRPEYSALGLIKQRFPDIPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ND+ +L + + VS+ +RPN+ Y + EK +D++ +++QE +SG
Sbjct: 186 DATRNDIERLLSLNDPLVQVSSFDRPNIRYTLIEKFKP----LDQLIRFVQEQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG S YHA +D R V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTTARLQSRGFSVGAYHAGLDHEHRSSVQDAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIEAYYQETGRAGRDGLPAEAVLLYDPADM 345
>gi|415838403|ref|ZP_11520381.1| ATP-dependent DNA helicase RecQ [Escherichia coli RN587/1]
gi|425280271|ref|ZP_18671483.1| ATP-dependent DNA helicase RecQ [Escherichia coli ARS4.2123]
gi|425302722|ref|ZP_18692600.1| ATP-dependent DNA helicase RecQ [Escherichia coli 07798]
gi|323189754|gb|EFZ75033.1| ATP-dependent DNA helicase RecQ [Escherichia coli RN587/1]
gi|408197343|gb|EKI22606.1| ATP-dependent DNA helicase RecQ [Escherichia coli ARS4.2123]
gi|408210381|gb|EKI34946.1| ATP-dependent DNA helicase RecQ [Escherichia coli 07798]
Length = 609
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWDPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|188532380|ref|YP_001906177.1| ATP-dependent DNA helicase RecQ [Erwinia tasmaniensis Et1/99]
gi|188027422|emb|CAO95269.1| ATP-dependent DNA helicase [Erwinia tasmaniensis Et1/99]
Length = 610
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 232/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
AD V + FG +R QQ II L+GRD LV+M GGGKSLCYQ+PA++R+G+ LVVS
Sbjct: 13 ADQVLRDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E+++ + G+ +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSGK--VRLLYIAPERLMMDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L C+ A ++++DEAHC SQWGHDFRP+Y LG L+ + PDVP+MALTATA
Sbjct: 131 -FLEQLTHCNPA----MLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ND+ +L + + VS+ +RPN+ Y + EK +++ +Y+Q+ + G
Sbjct: 186 DTTRNDIARLLQLDDPLIQVSSFDRPNIRYTLVEKFKP----TEQLLRYVQDQ--RGKCG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA MD R +V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNVHRARVQEAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E LL + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADM 345
>gi|402220569|gb|EJU00640.1| ATP-dependent DNA helicase [Dacryopinax sp. DJM-731 SS1]
Length = 725
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 180/416 (43%), Positives = 252/416 (60%), Gaps = 28/416 (6%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
FEW VFGI +R Q+ + NA + GRDV+ +M GGGKSL YQLPA+L G
Sbjct: 4 FEWSGELLHRAKQVFGIQDFRFCQKGVCNANMDGRDVVCVMPTGGGKSLTYQLPALLTPG 63
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL-------EKGEGELK 185
+V+SPL+SLI DQ++ L G+ A MLT T KE+ + ++ L E+ E E+K
Sbjct: 64 TTVVISPLVSLITDQILHLREAGVEAVMLTGGTKKEESREVFNRLGKKKHAREQEEKEIK 123
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+ YVTPE+I+KSK FMS +EK GRL+ I IDEAHC S GHDFRPDYK L IL+ F
Sbjct: 124 LCYVTPERIAKSKTFMSLMEKMALDGRLARIVIDEAHCVSSLGHDFRPDYKKLSILRQLF 183
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIK------------FVSTINRPNLFYMVREK 293
P VP++AL+AT V DL+++L +R + F S + R NL Y V K
Sbjct: 184 PSVPILALSATCPPSVLKDLLKILKLRPVVDGTSAPLDGGTVYFSSPLYRANLHYSVLPK 243
Query: 294 SSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG---ISADYYHADMD 350
I +A YI ++ ESGIVYC S+K+ + VA + Q I YHAD++
Sbjct: 244 PPSAAGAIQAMADYIL-AHHRGESGIVYCLSKKDTQTVADGIAQASKGKIRTGVYHADVE 302
Query: 351 INAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDG 410
+E +H RW ++QV+ T+AFG+GI+K DVRFV+HHS+SKS++ +YQESGRAGRDG
Sbjct: 303 DAEKEGIHRRWRTGQVQVVCATIAFGLGIDKGDVRFVLHHSMSKSLDGFYQESGRAGRDG 362
Query: 411 LPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEK 466
++C+L++R D R SS++ E G + ++R++Q N+ R ++F +
Sbjct: 363 KHADCVLYYRGQDATRLSSLICGEVEGQEKCMFMLRFAQ-----NLTDCRKLLFAR 413
>gi|16272669|ref|NP_438887.1| ATP-dependent DNA helicase [Haemophilus influenzae Rd KW20]
gi|260579821|ref|ZP_05847651.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae RdAW]
gi|2500112|sp|P71359.1|RECQ_HAEIN RecName: Full=ATP-dependent DNA helicase RecQ
gi|1573732|gb|AAC22387.1| ATP-dependent DNA helicase (recQ) [Haemophilus influenzae Rd KW20]
gi|260093105|gb|EEW77038.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae RdAW]
Length = 619
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 231/339 (68%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347
>gi|308188864|ref|YP_003932995.1| ATP-dependent DNA helicase RecQ [Pantoea vagans C9-1]
gi|308059374|gb|ADO11546.1| ATP-dependent DNA helicase RecQ [Pantoea vagans C9-1]
Length = 609
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 234/355 (65%), Gaps = 13/355 (3%)
Query: 70 SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
S ++ A V + FG +R QQ IIN LSGRD LV+M GGGKSLCYQ+PA++
Sbjct: 4 SAVLNQEALAQQVLQDTFGYQQFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALV 63
Query: 130 REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYV 189
REG+ LVVSPL+SL++DQV L A G+ A L ST +++ ++ + G +K+LY+
Sbjct: 64 REGLTLVVSPLISLMKDQVDQLLANGVAAAYLNSTMTRDQQQTVMADCRTGR--VKLLYI 121
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
PE++ F+ L A ++++DEAHC SQWGHDFRP+Y LG ++ +FP++P
Sbjct: 122 APERLMMDN-FLESLAHWQPA----MLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELP 176
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATA + +ND++ +LH++ + +S+ +RPN+ Y + EK D++ +Y+Q
Sbjct: 177 VMALTATADETTRNDIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKP----TDQLLRYVQ 232
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVI 369
+ + GI+YC SR + E A L+ RG S YHA +D R +V + ++ LQ++
Sbjct: 233 DQ--RGKCGIIYCNSRAKVEDTAARLQSRGFSVGAYHAGIDSEQRARVQEAFQRDDLQIV 290
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 291 VATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|302678065|ref|XP_003028715.1| hypothetical protein SCHCODRAFT_70092 [Schizophyllum commune H4-8]
gi|300102404|gb|EFI93812.1| hypothetical protein SCHCODRAFT_70092 [Schizophyllum commune H4-8]
Length = 788
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 174/471 (36%), Positives = 273/471 (57%), Gaps = 30/471 (6%)
Query: 1 METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGG 60
M+ E+ ++ ++AE+ +I +L + + + + + +G Q GG
Sbjct: 1 MDYSEVQAKVNQLDAEINAYTTEIAKLEELRAACRAEKDRILRSTASKPTVKGKERQTGG 60
Query: 61 SSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
++ S F W S VFGI +R Q++ INA + GRD++++M GGGKS
Sbjct: 61 -----IDYDSDDFPWMSALRAKMKEVFGIREFRLAQKKAINASMDGRDIVLVMPTGGGKS 115
Query: 121 LCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY------ 174
L YQLPA++ G LV+SPL++LI DQ++ L G+ A +T+ T KE + I
Sbjct: 116 LTYQLPALMTPGCTLVISPLVALISDQILHLEEAGVRAVKITAATPKEQSREITQQLTAM 175
Query: 175 --KALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFR 232
++L +G E+K+ YVTPE+I+KSK F+S L++ L+ I IDEAHC SQ GHDFR
Sbjct: 176 ANRSLPRGTPEIKLCYVTPERIAKSKTFLSLLQRLAKGAMLARIVIDEAHCVSQMGHDFR 235
Query: 233 PDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIK-----------FVSTI 281
PDY+ L +L++ FP+VP++AL+AT +V DL + L ++ I F S +
Sbjct: 236 PDYEKLHVLRSLFPNVPIIALSATCPPQVLKDLTKTLQLKPVINHTKNRDDGTVYFSSPL 295
Query: 282 NRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG-- 339
R NL Y V K + ++D + +I +P + SGI+YC S++E E VA+ LR++
Sbjct: 296 YRANLHYAVVPKPASADALLDLMKDFILSHHPGA-SGIIYCRSKQEAESVAEGLRKKSEG 354
Query: 340 -ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVET 398
I YHAD N +E +H++W ++QV+ T+AFG+GI+K DVRFV+HH SK+++
Sbjct: 355 RIRTGVYHADKPDNEKENLHVQWRSGRIQVVCATIAFGLGIDKGDVRFVLHH--SKTLDG 412
Query: 399 YYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQ 449
+YQESGRAGRDG S+C+L+++P D + G++ L ++ + Q
Sbjct: 413 FYQESGRAGRDGKDSDCVLYYKPQDASELAKFAATAKDGMEKLRSMLSFVQ 463
>gi|37927351|pdb|1OYY|A Chain A, Structure Of The Recq Catalytic Core Bound To Atp-Gamma-S
Length = 523
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|432604655|ref|ZP_19840881.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE66]
gi|431136589|gb|ELE38447.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE66]
Length = 611
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|415799701|ref|ZP_11498958.1| ATP-dependent DNA helicase RecQ [Escherichia coli E128010]
gi|419319320|ref|ZP_13861114.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12A]
gi|419325342|ref|ZP_13867026.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12B]
gi|419331540|ref|ZP_13873131.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12C]
gi|419336784|ref|ZP_13878296.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12D]
gi|419342409|ref|ZP_13883861.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12E]
gi|420393960|ref|ZP_14893204.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPEC C342-62]
gi|323161113|gb|EFZ47031.1| ATP-dependent DNA helicase RecQ [Escherichia coli E128010]
gi|378161445|gb|EHX22422.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12B]
gi|378164595|gb|EHX25537.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12A]
gi|378165464|gb|EHX26398.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12C]
gi|378179327|gb|EHX40057.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12D]
gi|378182541|gb|EHX43192.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12E]
gi|391310039|gb|EIQ67702.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPEC C342-62]
Length = 609
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAVAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|254361946|ref|ZP_04978077.1| ATP-dependent helicase RecQ [Mannheimia haemolytica PHL213]
gi|452745568|ref|ZP_21945402.1| ATP-dependent DNA helicase RecQ [Mannheimia haemolytica serotype 6
str. H23]
gi|153093493|gb|EDN74473.1| ATP-dependent helicase RecQ [Mannheimia haemolytica PHL213]
gi|452086443|gb|EME02832.1| ATP-dependent DNA helicase RecQ [Mannheimia haemolytica serotype 6
str. H23]
Length = 599
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 164/349 (46%), Positives = 237/349 (67%), Gaps = 15/349 (4%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
++ A V N+FG +R Q+E+INAVL RD LVIM GGGKSLCYQ+PA+ +GI L
Sbjct: 2 NTTAISVLNNIFGYQKFRDGQEEVINAVLENRDCLVIMTTGGGKSLCYQVPALCLDGITL 61
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKI 194
V+SPL+SL++DQV L GI A L ST + E+++ + KAL G+LK+LY++PEK+
Sbjct: 62 VISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQLVEQKALS---GQLKLLYLSPEKV 118
Query: 195 SKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALT 254
++ F + C ++S I++DEAHC SQWGHDFRP+Y LG L+ FP+VP+MALT
Sbjct: 119 -MTQGFFHFISLC----KISFIAVDEAHCVSQWGHDFRPEYTLLGGLRNTFPNVPLMALT 173
Query: 255 ATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPN 314
ATA ++D++ L + ++ + +RPN+ Y V+EK ++++ K+I S
Sbjct: 174 ATADLTTRSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKP----LEQLIKFI--SKQQ 227
Query: 315 SESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
+SGIVYC SRK+ E++ ++L R IS YHA M RE+V + ++ +Q++V T+A
Sbjct: 228 GKSGIVYCNSRKKVEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQRDDIQIVVATIA 287
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
FGMGINK +VRFV+H L +S+E+YYQE+GRAGRD LPSE +LF+ P+D
Sbjct: 288 FGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPSD 336
>gi|253991584|ref|YP_003042940.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
gi|211638462|emb|CAR67084.1| atp-dependent dna helicase recq (ec 3.6.1.-) [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253783034|emb|CAQ86199.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
Length = 608
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 241/348 (69%), Gaps = 13/348 (3%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S + V FG +R QQ++IN +L GRD LVIM GGGKSLCYQ+PA+++EG+ LV
Sbjct: 11 SLTEQVLRETFGYQQFRPGQQQVINTILEGRDCLVIMPTGGGKSLCYQIPALIQEGVTLV 70
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
VSPL+SL++DQV L A G+ A L ST ++E + + + +G +K+LY+ PE++
Sbjct: 71 VSPLISLMKDQVDQLQANGVAADCLNSTQAREQQIDVIRRCR--QGMVKLLYIAPERLMM 128
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
F+ +L + A ++++DEAHC SQWGHDFRP+Y+ LG L+ +FP +P++ALTAT
Sbjct: 129 DN-FLEQLLEWQPA----ILAVDEAHCISQWGHDFRPEYRALGQLRQRFPTLPVIALTAT 183
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A + +ND++ +L++ + +S+ +RPN+ Y + EK +D++ +I+ +
Sbjct: 184 ADETTRNDIVRLLNLNNPLIHISSFDRPNIRYTLIEKYKP----LDQLWLFIRAQ--KGK 237
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
SGI+YC SR + E+ ++ L++RG+S YHA +D N R +V + ++ LQV+V TVAFG
Sbjct: 238 SGIIYCNSRSKVEETSERLQKRGLSVAPYHAGLDNNQRARVQDAFQRDDLQVVVATVAFG 297
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
MGINKP+VRFV+H ++ +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 298 MGINKPNVRFVVHFNIPRNIESYYQETGRAGRDGLPAEAVLFYDPADM 345
>gi|194429200|ref|ZP_03061728.1| ATP-dependent DNA helicase RecQ [Escherichia coli B171]
gi|300923326|ref|ZP_07139374.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 182-1]
gi|194412712|gb|EDX29006.1| ATP-dependent DNA helicase RecQ [Escherichia coli B171]
gi|300420412|gb|EFK03723.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 182-1]
Length = 611
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAVAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|170680861|ref|YP_001746140.1| ATP-dependent DNA helicase RecQ [Escherichia coli SMS-3-5]
gi|170518579|gb|ACB16757.1| ATP-dependent DNA helicase RecQ [Escherichia coli SMS-3-5]
Length = 611
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAVCLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|414595339|ref|ZP_11444964.1| ATP-dependent DNA helicase RecQ [Escherichia blattae NBRC 105725]
gi|403193686|dbj|GAB82616.1| ATP-dependent DNA helicase RecQ [Escherichia blattae NBRC 105725]
Length = 630
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 159/348 (45%), Positives = 236/348 (67%), Gaps = 13/348 (3%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A V FG +R Q+ II+A+L G+D LV+M GGGKSLCYQ+PA++ +G+ +V
Sbjct: 32 SLAKQVLQETFGYQQFRPGQEAIIDAILGGQDSLVVMPTGGGKSLCYQIPALILDGLTVV 91
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
VSPL+SL++DQV L A G+PA L ST S+E + + GE+++LYV PE++
Sbjct: 92 VSPLISLMKDQVDQLLANGVPAACLNSTQSREQQLAVMNGCR--HGEIRLLYVAPERL-- 147
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
M L +L+L+++DEAHC SQWGHDFRP+Y LG L+ +F +VP +ALTAT
Sbjct: 148 ---MMDSLIDQLSQWKLALLAVDEAHCISQWGHDFRPEYALLGQLRHRFSEVPFVALTAT 204
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A + D++ +L ++ + +S+ +RPN+ YM+ EK +D++ +Y+QE +
Sbjct: 205 ADDTTRLDIVRLLGLKDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGK 258
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
SGI+YC SR + E A L+ RGISA YHA ++ + R +V ++ ++ LQ++V TVAFG
Sbjct: 259 SGIIYCNSRAKVEDTAARLQSRGISAGAYHAGLENDIRARVQEQFQRDDLQIVVATVAFG 318
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
MGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 319 MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 366
>gi|293417289|ref|ZP_06659914.1| ATP-dependent DNA helicase RecQ [Escherichia coli B185]
gi|291431057|gb|EFF04052.1| ATP-dependent DNA helicase RecQ [Escherichia coli B185]
Length = 611
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVVAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|432804057|ref|ZP_20038006.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE84]
gi|431345148|gb|ELG32075.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE84]
Length = 611
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ + +LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLDVMTGCRTGQ--ISLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|415758430|ref|ZP_11481551.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416048573|ref|ZP_11576347.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347992536|gb|EGY33932.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|348655277|gb|EGY70749.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans D17P-3]
Length = 629
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 233/340 (68%), Gaps = 15/340 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQEIINAVL+G+D LVIMA G GKSLCYQ+PA+ +G LVVSPL+SL+
Sbjct: 37 SVFGYQSFRKGQQEIINAVLNGQDCLVIMATGTGKSLCYQIPALCFDGTTLVVSPLISLM 96
Query: 145 QDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L A G+ A L ST T +E ++ +A+ G+LK+LY++PEK+ S F
Sbjct: 97 KDQVDQLRANGVAADYLNSTQTFEEQQQVQNRAIS---GQLKLLYLSPEKVMTSS-FFQF 152
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++S I+IDEAHC SQWGHDFRP+Y LG LK FP VP+MALTATA Q Q
Sbjct: 153 ISLC----QVSFIAIDEAHCISQWGHDFRPEYTQLGGLKGSFPKVPIMALTATADQTTQQ 208
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D+++ L + + +V + +RPN+ Y + EK ++++ +++ +SGIVYC
Sbjct: 209 DILQNLRLNRPHFYVGSFDRPNIRYTLVEKFKP----MEQLCRFVLAQ--KGKSGIVYCN 262
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SR + E++A+ L +G+ A YHA M+ REKV + ++ +QV+V T+AFGMGINK +
Sbjct: 263 SRNKVERIAETLCNKGVRAAAYHAGMENGLREKVQRDFQRDNIQVVVATIAFGMGINKSN 322
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 323 VRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 362
>gi|215489150|ref|YP_002331581.1| ATP-dependent DNA helicase RecQ [Escherichia coli O127:H6 str.
E2348/69]
gi|312969449|ref|ZP_07783651.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2362-75]
gi|417758250|ref|ZP_12406310.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2B]
gi|418999282|ref|ZP_13546858.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC1A]
gi|419010310|ref|ZP_13557717.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC1C]
gi|419016012|ref|ZP_13563345.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC1D]
gi|419020937|ref|ZP_13568233.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC1E]
gi|419026389|ref|ZP_13573601.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2A]
gi|419031540|ref|ZP_13578679.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2C]
gi|419037099|ref|ZP_13584169.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2D]
gi|419042238|ref|ZP_13589252.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2E]
gi|215267222|emb|CAS11670.1| ATP-dependent DNA helicase [Escherichia coli O127:H6 str. E2348/69]
gi|312285996|gb|EFR13914.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2362-75]
gi|377838948|gb|EHU04052.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC1C]
gi|377839035|gb|EHU04137.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC1A]
gi|377852862|gb|EHU17774.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC1D]
gi|377855915|gb|EHU20778.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC1E]
gi|377858259|gb|EHU23102.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2A]
gi|377870225|gb|EHU34913.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2B]
gi|377872200|gb|EHU36849.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2C]
gi|377874232|gb|EHU38861.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2D]
gi|377886009|gb|EHU50498.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC2E]
Length = 609
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ + +LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLDVMTGCRTGQ--ISLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|429107085|ref|ZP_19168954.1| ATP-dependent DNA helicase RecQ [Cronobacter malonaticus 681]
gi|426293808|emb|CCJ95067.1| ATP-dependent DNA helicase RecQ [Cronobacter malonaticus 681]
Length = 609
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 235/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 6 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 65
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S+++++ + G+ +++LY+ P
Sbjct: 66 GLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRTGQ--VRLLYIAP 123
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP M
Sbjct: 124 ERLMMDN-FIDTLGYWD----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFM 178
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 179 ALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 234
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 235 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 292
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|218692098|ref|YP_002400310.1| ATP-dependent DNA helicase RecQ [Escherichia coli ED1a]
gi|218429662|emb|CAR10626.2| ATP-dependent DNA helicase [Escherichia coli ED1a]
Length = 609
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ + +LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--ISLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|110644147|ref|YP_671877.1| ATP-dependent DNA helicase RecQ [Escherichia coli 536]
gi|419702662|ref|ZP_14230251.1| ATP-dependent DNA helicase RecQ [Escherichia coli SCI-07]
gi|110345739|gb|ABG71976.1| ATP-dependent DNA helicase RecQ [Escherichia coli 536]
gi|380346195|gb|EIA34494.1| ATP-dependent DNA helicase RecQ [Escherichia coli SCI-07]
Length = 609
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ + +LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--ISLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|403173011|ref|XP_003332116.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170091|gb|EFP87697.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1231
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 168/365 (46%), Positives = 230/365 (63%), Gaps = 12/365 (3%)
Query: 63 STAVENWSG--TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKS 120
S VE++S T W + +F + +R NQ + IN LSG+D V+M GGGKS
Sbjct: 436 SQPVEDYSKKMTHPWSRDVGKALVKIFKLHTWRHNQIDAINTTLSGKDCFVLMPTGGGKS 495
Query: 121 LCYQLPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKA 176
LCYQLPAV+R +G+ +V+SPL+SLI DQV L A I A T + + ++ + +
Sbjct: 496 LCYQLPAVVRSGVTKGVTIVISPLISLITDQVQALCAKHIGAAAFTGSMTAQERENVMND 555
Query: 177 LEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236
L + L ++YVTPE I +S + L + L+ DEAHC SQWGHDFRPDYK
Sbjct: 556 LRSVDPALCLVYVTPEMIMRSSVLSNILTDLKNRKLLARFVFDEAHCVSQWGHDFRPDYK 615
Query: 237 NLG-ILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSS 295
++G +L+ +F ++P +ALTATA +VQ D+M L I C + NR NL Y VR K+
Sbjct: 616 DIGPMLRKEFKNIPFIALTATANHRVQQDVMSNLKITGCRVLTQSFNRINLRYEVRPKT- 674
Query: 296 VGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAR 354
K V+++I + I + ESGI+YC S+K+CE+VA L + I+A +YHA M + R
Sbjct: 675 --KDVLNDIIQIITVDH-KGESGIIYCLSKKQCEEVAAHLSAKNRITAHHYHAGMSKDDR 731
Query: 355 EKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSE 414
+K+ W KLQVI T+AFGMGI+KPDVRFVIHHS+ S+E YYQE+GRAGRDG SE
Sbjct: 732 QKIQHGWQVGKLQVICATIAFGMGIDKPDVRFVIHHSMPSSLEGYYQETGRAGRDGQISE 791
Query: 415 CLLFF 419
C+LF+
Sbjct: 792 CILFY 796
>gi|312971887|ref|ZP_07786061.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1827-70]
gi|310334264|gb|EFQ00469.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1827-70]
Length = 609
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V + FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQDTFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+ GI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KPGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|294893368|ref|XP_002774437.1| eukaryotic translation initiation factor 4A, putative [Perkinsus
marinus ATCC 50983]
gi|239879830|gb|EER06253.1| eukaryotic translation initiation factor 4A, putative [Perkinsus
marinus ATCC 50983]
Length = 702
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 176/439 (40%), Positives = 263/439 (59%), Gaps = 21/439 (4%)
Query: 13 VEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASRGSPIQYGGSSSTAVENWSGT 72
+E E+ V+ QI++L +D L + + L+S L + + S + W+ T
Sbjct: 21 LEEELDSVERQIEELRVTRDILRSKLARLRSKLGSSPSPTSSSV------------WADT 68
Query: 73 -FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL-- 129
F WDS D FG+ +R +Q I+NA+LSG D +++ G GKSL YQLPAVL
Sbjct: 69 GFSWDSSLRDAAWRYFGVKQFRDHQLSILNAILSGSDAVLVSPTGSGKSLVYQLPAVLMG 128
Query: 130 REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYV 189
+ + +VVSPL+SL+ DQV L A+G+ A +L++ ++ + I K L++ ++ ++V
Sbjct: 129 EKRLTVVVSPLISLMHDQVSSLLAVGVAARLLSAQEPRQRQTAIRKELKEKHVDVPQIFV 188
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
TPE+I+KS +FM+ L + H A + LI++DE+HC SQWGHDFR DY LG+L+ FP VP
Sbjct: 189 TPERIAKSAQFMNLLGRLHEAKSIGLIAVDESHCISQWGHDFRQDYLKLGMLRKHFPGVP 248
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFV--STINRPNLFYMV----REKSSVGKVVIDE 303
++A TATAT +V D+ L + + V + +RPN+FY V R+K+ + ++
Sbjct: 249 IVATTATATPQVVEDICGRLDLDRSRTNVKRAPCDRPNIFYGVLYKPRDKAKAVEQLLAT 308
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSK 363
+ K P +GIVYC SRKE E V L GI A +YH ++ ++R VH W
Sbjct: 309 VTKLCASCSPADSNGIVYCLSRKETEDVCASLNHAGIPAVWYHGELGTDSRAAVHKSWMS 368
Query: 364 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
+ +VIV TVAFGMG++ VR+VIH S+ S++ Y QESGR GRDG P+ +L P D
Sbjct: 369 GESKVIVATVAFGMGVHHDSVRWVIHFSVPPSIQHYQQESGRCGRDGRPAISILMASPFD 428
Query: 424 VPRQSSMVFYENSGLQNLY 442
+ RQS MV+++ + LQ LY
Sbjct: 429 ICRQSVMVYWKPNALQELY 447
>gi|372276821|ref|ZP_09512857.1| ATP-dependent DNA helicase RecQ [Pantoea sp. SL1_M5]
Length = 609
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 234/355 (65%), Gaps = 13/355 (3%)
Query: 70 SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
S ++ A V + FG +R QQ IIN LSGRD LV+M GGGKSLCYQ+PA++
Sbjct: 4 SAVLNQEALAQQVLQDTFGYQHFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALV 63
Query: 130 REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYV 189
REG+ LVVSPL+SL++DQV L A G+ A L ST +++ ++ + G +K+LY+
Sbjct: 64 REGLTLVVSPLISLMKDQVDQLLANGVAAAYLNSTMTRDQQQTVMADCRTGR--VKLLYI 121
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
PE++ F+ L A ++++DEAHC SQWGHDFRP+Y LG ++ +FP++P
Sbjct: 122 APERLMMDN-FLDSLAHWQPA----MLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELP 176
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATA + +ND++ +LH++ + +S+ +RPN+ Y + EK D++ +Y+Q
Sbjct: 177 VMALTATADETTRNDIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKP----TDQLLRYVQ 232
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVI 369
+ + GI+YC SR + E A L+ RG S YHA +D R +V + ++ LQ++
Sbjct: 233 DQ--RGKCGIIYCNSRAKVEDTAARLQSRGFSVGAYHAGIDSEQRGRVQEAFQRDDLQIV 290
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 291 VATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|156057539|ref|XP_001594693.1| hypothetical protein SS1G_04501 [Sclerotinia sclerotiorum 1980]
gi|154702286|gb|EDO02025.1| hypothetical protein SS1G_04501 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1200
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 230/341 (67%), Gaps = 9/341 (2%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F + +R NQ E INA L+GRD ++M GGGKSLCYQLPA+++ +G+ +VVSPLL+
Sbjct: 828 FRLTGFRQNQLEAINATLAGRDAFILMPTGGGKSLCYQLPAIVQSGATKGVTIVVSPLLA 887
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGE--LKMLYVTPEKISKSKRF 200
L+ DQV L L I A++ S ++KE ++ ++ L + + E +++LYVTPE I+KS
Sbjct: 888 LMHDQVDHLRRLRIQAYLFNSESTKETKQELFTGLSQSKPEQFVELLYVTPEMINKSSII 947
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
SKL+ + RL+ I IDEAHC SQWGHDFRPDYK+L L+ ++P VP +ALTATAT++
Sbjct: 948 QSKLDDLYAKERLARIVIDEAHCVSQWGHDFRPDYKSLHELRERYPGVPFIALTATATER 1007
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKV--VIDEIAKYIQESYPNSESG 318
V+ D++ L + C + + NRPN++Y VR K G + EI + Y N +SG
Sbjct: 1008 VKKDVIHNLGMHNCDQLKQSFNRPNIYYEVRRKMGKGSTAAMFSEITTMLSVDYKN-QSG 1066
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR CE VA+ LR +GI A ++HA M ++ + +W +QV+V T+AFGMG
Sbjct: 1067 IIYCLSRDNCEDVAKRLRGQGIKAHHFHAHMAAEDKKDIQHQWQVGDIQVVVATIAFGMG 1126
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
I+K +VRFVIH+ L K++E YYQE+GRAGRDG P+ C L++
Sbjct: 1127 IDKQNVRFVIHYCLPKTLEGYYQETGRAGRDGKPASCFLYY 1167
>gi|147783250|emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera]
Length = 1640
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 166/372 (44%), Positives = 232/372 (62%), Gaps = 11/372 (2%)
Query: 67 ENWSGTFEWDS--RADDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
E+ +GT +++ DD L +FG +R Q + A ++ RD V+M GGGKSL
Sbjct: 290 EDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQHQACKASVTKRDCFVLMPTGGGKSL 349
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKG 180
CYQLPA L+ G+ +VV PLLSLIQDQ++ L GIPA L+S + + K L K
Sbjct: 350 CYQLPATLQPGVTVVVCPLLSLIQDQIITLNLNFGIPATFLSSQQTASQAAAVLKELRKD 409
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+ K+LYVTPE+I+ + F L+ H G+L+ +DEAHC SQWGHDFRPDY+ LG
Sbjct: 410 KPSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRELGC 469
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK FPDVP+MALTATATQ V+ D++ L I + ++ +R NL Y V K+ K
Sbjct: 470 LKQNFPDVPVMALTATATQPVRKDILNSLRIPHALVLETSFDRSNLKYEVIGKT---KEP 526
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHM 359
+ ++ + +++ + N GIVYC S+ EC +V++ L + I YYHA + R V
Sbjct: 527 LKQLGQLLKDRFKNL-CGIVYCLSKSECAEVSKFLNGKCKIKTVYYHAGLSARQRIDVQK 585
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+W K+ +I T+AFGMGINKP+VRFVIH+++SKS+E YYQESGRAGRD LP+ C+ +
Sbjct: 586 KWHTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDLPAVCMALY 645
Query: 420 RPADVPRQSSMV 431
+ D R M+
Sbjct: 646 QKKDFSRVVCML 657
>gi|191174273|ref|ZP_03035782.1| ATP-dependent DNA helicase RecQ [Escherichia coli F11]
gi|300979425|ref|ZP_07174554.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 200-1]
gi|331660168|ref|ZP_08361104.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA206]
gi|386621651|ref|YP_006141231.1| ATP-dependent DNA helicase [Escherichia coli NA114]
gi|387831714|ref|YP_003351651.1| DNA helicase RecQ [Escherichia coli SE15]
gi|417285103|ref|ZP_12072394.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07793]
gi|419912569|ref|ZP_14431019.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD1]
gi|422371441|ref|ZP_16451821.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 16-3]
gi|422373962|ref|ZP_16454257.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 60-1]
gi|432424226|ref|ZP_19666762.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE178]
gi|432468160|ref|ZP_19710236.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE205]
gi|432473175|ref|ZP_19715210.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE206]
gi|432502379|ref|ZP_19744127.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE216]
gi|432561089|ref|ZP_19797741.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE49]
gi|432585350|ref|ZP_19821740.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE57]
gi|432696687|ref|ZP_19931877.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE162]
gi|432708217|ref|ZP_19943291.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE6]
gi|432715681|ref|ZP_19950704.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE8]
gi|432734575|ref|ZP_19969396.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE45]
gi|432761660|ref|ZP_19996147.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE46]
gi|432891418|ref|ZP_20104136.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE165]
gi|432901413|ref|ZP_20111499.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE192]
gi|432923092|ref|ZP_20125798.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE173]
gi|432929782|ref|ZP_20130734.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE175]
gi|432983329|ref|ZP_20172095.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE211]
gi|433030772|ref|ZP_20218615.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE109]
gi|433075106|ref|ZP_20261740.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE129]
gi|433080034|ref|ZP_20266548.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE131]
gi|433098652|ref|ZP_20284816.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE139]
gi|433108083|ref|ZP_20294040.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE148]
gi|433122440|ref|ZP_20308093.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE157]
gi|433185565|ref|ZP_20369797.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE85]
gi|190905456|gb|EDV65086.1| ATP-dependent DNA helicase RecQ [Escherichia coli F11]
gi|281180871|dbj|BAI57201.1| DNA helicase RecQ [Escherichia coli SE15]
gi|300308016|gb|EFJ62536.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 200-1]
gi|315296805|gb|EFU56097.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 16-3]
gi|324014666|gb|EGB83885.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 60-1]
gi|331052736|gb|EGI24771.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA206]
gi|333972152|gb|AEG38957.1| ATP-dependent DNA helicase [Escherichia coli NA114]
gi|386250344|gb|EII96511.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07793]
gi|388391428|gb|EIL52895.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD1]
gi|430941449|gb|ELC61596.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE178]
gi|430990518|gb|ELD06948.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE205]
gi|430995341|gb|ELD11638.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE206]
gi|431025701|gb|ELD38799.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE216]
gi|431088285|gb|ELD94181.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE49]
gi|431114336|gb|ELE17880.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE57]
gi|431230687|gb|ELF26462.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE162]
gi|431251083|gb|ELF45101.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE8]
gi|431254661|gb|ELF47929.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE6]
gi|431270562|gb|ELF61725.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE45]
gi|431305336|gb|ELF93665.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE46]
gi|431422057|gb|ELH04252.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE192]
gi|431429823|gb|ELH11658.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE165]
gi|431434505|gb|ELH16154.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE173]
gi|431439929|gb|ELH21260.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE175]
gi|431487979|gb|ELH67620.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE211]
gi|431539939|gb|ELI15573.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE109]
gi|431582631|gb|ELI54644.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE129]
gi|431592999|gb|ELI63564.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE131]
gi|431611967|gb|ELI81226.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE139]
gi|431623503|gb|ELI92172.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE148]
gi|431638407|gb|ELJ06442.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE157]
gi|431701482|gb|ELJ66398.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE85]
Length = 611
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ + +LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--ISLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|409202724|ref|ZP_11230927.1| ATP-dependent DNA helicase [Pseudoalteromonas flavipulchra JG1]
Length = 607
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 156/342 (45%), Positives = 231/342 (67%), Gaps = 13/342 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R Q +II + L+G+D LV++ GGGKSLCYQ+PAVL G+ +V+SPL+SL+
Sbjct: 21 DVFGYSTFRDGQLDIIQSSLAGQDTLVLLPTGGGKSLCYQVPAVLFAGVTIVISPLISLM 80
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L A GI A + ++ + E ++ Y AL +G LK+LYV PEK + + F+ ++
Sbjct: 81 QDQVAQLKAQGIAAEYINNSVAWEQQRDTYDAL--FQGRLKLLYVAPEK-ALQRDFIERI 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
C+ +SL +IDEAHC S WGHDFRP Y L L+ FP VPMMALTATA + D
Sbjct: 138 SNCN----ISLFAIDEAHCVSHWGHDFRPHYFRLKELRQHFPSVPMMALTATADLATRKD 193
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L ++ + + +RPN+ Y + EK + ++ +Y++E +SGI+YC S
Sbjct: 194 IVQQLGMQAPFIYTGSFDRPNIRYTIEEKFKP----LSQLIRYLKEQ--KGQSGIIYCGS 247
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK + +A++L G +A YHA +D + R+ V R++++ +Q++V TVAFGMGINKP+V
Sbjct: 248 RKRVDDIAEKLIDAGFNAAGYHAGLDNDQRQFVQNRFARDDIQIVVATVAFGMGINKPNV 307
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
RFV+H+ + KSVE YYQE+GRAGRD L +E +++F PAD+PR
Sbjct: 308 RFVVHYDIPKSVEAYYQETGRAGRDSLAAEAVMYFDPADIPR 349
>gi|387891019|ref|YP_006321317.1| ATP-dependent DNA helicase RecQ [Escherichia blattae DSM 4481]
gi|386925852|gb|AFJ48806.1| ATP-dependent DNA helicase RecQ [Escherichia blattae DSM 4481]
Length = 609
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 159/348 (45%), Positives = 236/348 (67%), Gaps = 13/348 (3%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A V FG +R Q+ II+A+L G+D LV+M GGGKSLCYQ+PA++ +G+ +V
Sbjct: 11 SLAKQVLQETFGYQQFRPGQEAIIDAILGGQDSLVVMPTGGGKSLCYQIPALILDGLTVV 70
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
VSPL+SL++DQV L A G+PA L ST S+E + + GE+++LYV PE++
Sbjct: 71 VSPLISLMKDQVDQLLANGVPAACLNSTQSREQQLAVMNGCR--HGEIRLLYVAPERL-- 126
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
M L +L+L+++DEAHC SQWGHDFRP+Y LG L+ +F +VP +ALTAT
Sbjct: 127 ---MMDSLIDQLSQWKLALLAVDEAHCISQWGHDFRPEYALLGQLRHRFSEVPFVALTAT 183
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A + D++ +L ++ + +S+ +RPN+ YM+ EK +D++ +Y+QE +
Sbjct: 184 ADDTTRLDIVRLLGLKDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGK 237
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
SGI+YC SR + E A L+ RGISA YHA ++ + R +V ++ ++ LQ++V TVAFG
Sbjct: 238 SGIIYCNSRAKVEDTAARLQSRGISAGAYHAGLENDIRARVQEQFQRDDLQIVVATVAFG 297
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
MGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 298 MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|367009466|ref|XP_003679234.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
gi|359746891|emb|CCE90023.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
Length = 1364
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 236/367 (64%), Gaps = 16/367 (4%)
Query: 69 WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
WS E+ R +F +P +R +Q E INA LSG+DV V+M GGGKSLCYQLPAV
Sbjct: 593 WSAEVEYRLRE------IFKLPGFRPHQLEAINATLSGKDVFVLMPTGGGKSLCYQLPAV 646
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ +G +V+SPL+SL+QDQV L + I A M +S + E + + G L
Sbjct: 647 VKSGKTKGTTIVISPLISLMQDQVEHLLSNNIKASMFSSKGTAEQRRQTFNLF--IHGLL 704
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + K ++ G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 705 DLIYISPEMISASEQCKRGINKLYNDGKLARIVVDEAHCVSNWGHDFRPDYKELKYFKRE 764
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PDVPM+ALTATA+++V+ D++ L +++ + + NR NLFY + +K+ K I EI
Sbjct: 765 YPDVPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLFYEILKKT---KNSIFEI 821
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
I+ + N ++GI+YC S+ CEQ A ++++ GI +YHA M+ + R + W +
Sbjct: 822 CDTIKIRFRN-QTGIIYCHSKNSCEQTAAQMQRSGIKCAFYHAGMEPDDRLTIQKAWQAD 880
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F DV
Sbjct: 881 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCMAYFSFRDV 940
Query: 425 PRQSSMV 431
+M+
Sbjct: 941 RTIQTMI 947
>gi|417846212|ref|ZP_12492224.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21639]
gi|341953231|gb|EGT79743.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21639]
Length = 627
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 230/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ EG+ LV+SPL+SL+
Sbjct: 30 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQVPALCFEGLTLVISPLISLM 89
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+ LK+LYV+PEK+ + F
Sbjct: 90 KDQVDQLQANGIEADFLNSSQTLEQQQRVQNKLISGQ--LKLLYVSPEKVMTNSFF---- 143
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++S I+IDEAHC SQWGHDFRP+Y LG LK FP P+MALTATA + D
Sbjct: 144 -QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADHATRQD 202
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L++ +++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 203 ILTHLNLENPHRYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 256
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 257 RNKVERIAESLRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNV 316
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RF+ H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 317 RFIAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 355
>gi|409046313|gb|EKM55793.1| hypothetical protein PHACADRAFT_95968 [Phanerochaete carnosa
HHB-10118-sp]
Length = 620
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 226/344 (65%), Gaps = 6/344 (1%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPL 140
N FG+ +R NQ E A + G DV V+M GGGKSLC+QLPAV++ +G+ +V+SPL
Sbjct: 99 NAFGLRTFRPNQLEACTASMQGHDVFVLMPTGGGKSLCFQLPAVVKNAQMDGVTVVISPL 158
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
+SL+ DQV L A G+ + E+ +++ L+ +LY TPEK+ KS+R
Sbjct: 159 VSLMHDQVSALRAKGVKVACFVGDQTSEEANNVHQMLKTPRHRPAILYATPEKLDKSERL 218
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ L+ + AG L I DEAHC WG +FR YK+ ++ ++P VP++ALTATA ++
Sbjct: 219 KNDLQALYEAGLLVRIVADEAHCIVTWGRNFRDSYKDFTWIRDRYPSVPVIALTATANKQ 278
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
D++ L +R C+++ + NRPNL Y VRE+ SV V+ D+IA+ I Y ++GI+
Sbjct: 279 AIQDIIARLRMRNCVQYAMSFNRPNLLYEVRERGSV-NVMKDDIARMINSQY-RGKTGII 336
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
Y SR +CE A++LR+ GI A++YHA + ++ +E+V +W ++VIV T+AFGMGI+
Sbjct: 337 YYSSRDKCETFAKQLRKAGIVAEHYHASLPVSEKERVQQQWQAGHVKVIVATIAFGMGID 396
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
KPDVRFVIH SL S+ YYQE+GRAGRDGLPS+C+L++ +D
Sbjct: 397 KPDVRFVIHCSLPNSLSDYYQETGRAGRDGLPSDCILYYHYSDA 440
>gi|422381292|ref|ZP_16461460.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 57-2]
gi|324007518|gb|EGB76737.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 57-2]
Length = 611
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ + +LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--ISLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|415831473|ref|ZP_11517190.1| ATP-dependent DNA helicase RecQ [Escherichia coli OK1357]
gi|417599262|ref|ZP_12249886.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3030-1]
gi|417669412|ref|ZP_12318948.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_O31]
gi|418943250|ref|ZP_13496459.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H43 str.
T22]
gi|419280425|ref|ZP_13822664.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10E]
gi|419347603|ref|ZP_13888969.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13A]
gi|419352064|ref|ZP_13893390.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13B]
gi|419357538|ref|ZP_13898783.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13C]
gi|419362509|ref|ZP_13903714.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13D]
gi|419367635|ref|ZP_13908783.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13E]
gi|419372449|ref|ZP_13913555.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14A]
gi|419377952|ref|ZP_13918966.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14B]
gi|419383345|ref|ZP_13924284.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14C]
gi|419388582|ref|ZP_13929446.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14D]
gi|425424847|ref|ZP_18805992.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1288]
gi|323182595|gb|EFZ67999.1| ATP-dependent DNA helicase RecQ [Escherichia coli OK1357]
gi|345348758|gb|EGW81051.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3030-1]
gi|375321441|gb|EHS67277.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H43 str.
T22]
gi|378124120|gb|EHW85532.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10E]
gi|378182454|gb|EHX43106.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13A]
gi|378195639|gb|EHX56135.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13C]
gi|378195725|gb|EHX56220.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13B]
gi|378198136|gb|EHX58608.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13D]
gi|378209534|gb|EHX69904.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13E]
gi|378212157|gb|EHX72481.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14A]
gi|378214771|gb|EHX75074.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14B]
gi|378223929|gb|EHX84138.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14C]
gi|378227658|gb|EHX87827.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14D]
gi|397783043|gb|EJK93905.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_O31]
gi|408340410|gb|EKJ54905.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1288]
Length = 609
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +++ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|386389497|ref|ZP_10074311.1| ATP-dependent DNA helicase RecQ [Haemophilus paraphrohaemolyticus
HK411]
gi|385695267|gb|EIG25829.1| ATP-dependent DNA helicase RecQ [Haemophilus paraphrohaemolyticus
HK411]
Length = 601
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/351 (46%), Positives = 234/351 (66%), Gaps = 15/351 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
NVFG +R QQE+I + L+G+D VIM GGGKSLCYQ+PA+ EGI LV+SPL+SL+
Sbjct: 13 NVFGYQQFRQGQQEVIESTLAGKDTFVIMTTGGGKSLCYQVPALCLEGITLVISPLISLM 72
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L GI A L ST + E+++ + KAL G+LK+LY++PEK+ ++ F
Sbjct: 73 KDQVDQLLTNGIEAAYLNSTQTLEEQRAVEQKALN---GQLKLLYLSPEKV-MTQGFYHF 128
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++S I++DEAHC SQWGHDFRP+Y LG L+ FP++P+MALTATA +
Sbjct: 129 ISHC----KISFIAVDEAHCVSQWGHDFRPEYTLLGNLRNTFPNIPLMALTATADPTTRA 184
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D++ L + ++ + +RPN+ Y V+EK ++++AK+I +SGIVYC
Sbjct: 185 DILHHLRLNDPHTYLGSFDRPNIRYTVQEKFKP----MEQLAKFIAGQ--KGKSGIVYCN 238
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SRK+ E++ ++L R IS YHA M + RE V + ++ +QV+V T+AFGMGINK +
Sbjct: 239 SRKKVEEITEKLSARNISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSN 298
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYE 434
VRFV+H L +S+E+YYQE+GRAGRD LPS+ ++F+ PAD M+ E
Sbjct: 299 VRFVVHFDLPRSIESYYQETGRAGRDDLPSQAVMFYDPADYAWLQKMLLEE 349
>gi|417626000|ref|ZP_12276288.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_H.1.8]
gi|345372046|gb|EGX04013.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_H.1.8]
Length = 609
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ + +LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IHLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|417604728|ref|ZP_12255290.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_94C]
gi|345347248|gb|EGW79562.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_94C]
Length = 609
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +++ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|383192105|ref|YP_005202233.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371590363|gb|AEX54093.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 610
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 235/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V + FG +R QQ IIN +SGRD LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AHQVLRDTFGYQQFRPGQQTIINTAISGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E + + G +KMLY+ PE++
Sbjct: 73 PLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLDVMAGCRAGR--IKMLYIAPERLMMGD 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L++ + A ++++DEAHC SQWGHDFRP+Y+ LG LK ++P +P++ALTATA
Sbjct: 131 -FLEQLQQWNPA----MLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +ND++ +L + + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 EATRNDIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKP----LDQLIRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA +D + R +V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADM 345
>gi|317046403|ref|YP_004114051.1| ATP-dependent DNA helicase RecQ [Pantoea sp. At-9b]
gi|316948020|gb|ADU67495.1| ATP-dependent DNA helicase RecQ [Pantoea sp. At-9b]
Length = 607
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 236/355 (66%), Gaps = 13/355 (3%)
Query: 70 SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
S ++ A V + FG +R QQ II L+GRD LV+M GGGKSLCYQ+PA++
Sbjct: 4 SAVLNQETLAQQVLQDTFGYQQFRPGQQTIIETALAGRDCLVVMPTGGGKSLCYQIPALV 63
Query: 130 REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYV 189
REG+ LVVSPL+SL++DQV L A G+ A L ST ++E+++ ++ G LK+LY+
Sbjct: 64 REGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTQTREEQQQVFADCRSGR--LKLLYI 121
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
PE++ + L+ HH + ++++DEAHC SQWGHDFRP+Y LG L+ +FP++P
Sbjct: 122 APERLMMD----NFLDSLHHWNPV-MLAVDEAHCISQWGHDFRPEYGALGQLRQRFPELP 176
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATA + +ND+ +L + + +S+ +RPN+ Y + EK +++ +Y+Q
Sbjct: 177 VMALTATADETTRNDIAHLLQMHDPLIQISSFDRPNIRYTLVEKFKP----TEQLLRYVQ 232
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVI 369
+ +SGI+YC SR + E A L+ RG+S YHA +D R +V + ++ LQ++
Sbjct: 233 DQ--RGKSGIIYCNSRAKVEDTAARLQSRGLSVGAYHAGIDSAQRARVQEAFQRDDLQIV 290
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 291 VATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|420338400|ref|ZP_14839955.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-315]
gi|391258280|gb|EIQ17384.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-315]
Length = 609
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQGEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|429089133|ref|ZP_19151865.1| ATP-dependent DNA helicase RecQ [Cronobacter universalis NCTC 9529]
gi|426508936|emb|CCK16977.1| ATP-dependent DNA helicase RecQ [Cronobacter universalis NCTC 9529]
Length = 609
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 235/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 6 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 65
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S+++++ + GE +++LY+ P
Sbjct: 66 GLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSRDEQQAVLAGCRTGE--VRLLYIAP 123
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP +
Sbjct: 124 ERLMMDN-FIDTLGYWD----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFI 178
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 179 ALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 234
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 235 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 292
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|422831064|ref|ZP_16879214.1| ATP-dependent DNA helicase recQ [Escherichia coli B093]
gi|371602955|gb|EHN91637.1| ATP-dependent DNA helicase recQ [Escherichia coli B093]
Length = 611
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLDVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRVDVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|251787081|ref|YP_003001385.1| ATP-dependent DNA helicase [Escherichia coli BL21(DE3)]
gi|242379354|emb|CAQ34167.1| ATP-dependent DNA helicase [Escherichia coli BL21(DE3)]
Length = 609
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRVDVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|419313842|ref|ZP_13855697.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11E]
gi|378154783|gb|EHX15854.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11E]
Length = 454
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|429102817|ref|ZP_19164791.1| ATP-dependent DNA helicase RecQ [Cronobacter turicensis 564]
gi|426289466|emb|CCJ90904.1| ATP-dependent DNA helicase RecQ [Cronobacter turicensis 564]
Length = 609
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 235/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 6 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 65
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S+++++ + GE +++LY+ P
Sbjct: 66 GLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRTGE--VRLLYIAP 123
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP +
Sbjct: 124 ERLMMDN-FIDTLGYWD----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFI 178
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 179 ALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 234
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 235 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 292
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|170022156|ref|YP_001727110.1| ATP-dependent DNA helicase RecQ [Escherichia coli ATCC 8739]
gi|169757084|gb|ACA79783.1| ATP-dependent DNA helicase, RecQ family [Escherichia coli ATCC
8739]
Length = 609
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLIDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|194438627|ref|ZP_03070715.1| ATP-dependent DNA helicase RecQ [Escherichia coli 101-1]
gi|253775552|ref|YP_003038383.1| ATP-dependent DNA helicase RecQ [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163767|ref|YP_003046875.1| ATP-dependent DNA helicase RecQ [Escherichia coli B str. REL606]
gi|254290517|ref|YP_003056265.1| ATP-dependent DNA helicase [Escherichia coli BL21(DE3)]
gi|300930009|ref|ZP_07145442.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 187-1]
gi|422789266|ref|ZP_16841997.1| ATP-dependent DNA helicase RecQ [Escherichia coli H489]
gi|422794104|ref|ZP_16846795.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA007]
gi|442596884|ref|ZP_21014685.1| ATP-dependent DNA helicase RecQ [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|194422431|gb|EDX38430.1| ATP-dependent DNA helicase RecQ [Escherichia coli 101-1]
gi|253326596|gb|ACT31198.1| ATP-dependent DNA helicase, RecQ family [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975668|gb|ACT41339.1| ATP-dependent DNA helicase [Escherichia coli B str. REL606]
gi|253979824|gb|ACT45494.1| ATP-dependent DNA helicase [Escherichia coli BL21(DE3)]
gi|300462099|gb|EFK25592.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 187-1]
gi|323959079|gb|EGB54748.1| ATP-dependent DNA helicase RecQ [Escherichia coli H489]
gi|323969335|gb|EGB64634.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA007]
gi|441654632|emb|CCQ00598.1| ATP-dependent DNA helicase RecQ [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
Length = 611
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRVDVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|358054510|dbj|GAA99436.1| hypothetical protein E5Q_06135 [Mixia osmundae IAM 14324]
Length = 1229
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/504 (37%), Positives = 284/504 (56%), Gaps = 47/504 (9%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR- 130
+F W V F + ++R NQ + INA L+ DV ++M GGGKSLCYQLPAV++
Sbjct: 476 SFPWSRDVLKVLNKHFRLSSFRPNQLKAINATLAADDVFILMPTGGGKSLCYQLPAVVQS 535
Query: 131 ---EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK-- 185
G+++V+SPLLSLI DQ L + A S K D F+ L + + +
Sbjct: 536 GKTRGVSIVISPLLSLIHDQCQALMDKDVIALAFNSDLKKSDRDFVINELRTADDDTRPC 595
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
++YVTPE I+KS F L H RL+ IDEAHC S WG DFRPDYK LG +K ++
Sbjct: 596 LIYVTPEMIAKSTLFKDVLRNLHRRQRLARFVIDEAHCISSWGFDFRPDYKELGSIKREY 655
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIA 305
P VP+MALTATA ++V+ D++ L I C+ + NRPNL Y VR K GK++I +I+
Sbjct: 656 PGVPIMALTATANERVKQDVITSLGINDCLVLSQSFNRPNLRYEVRPK---GKLIIKDIS 712
Query: 306 KYIQESYPNSESGIVYCFSRKECEQVAQELR-QRGISADYYHADMDINAREKVHMRWSKN 364
I+ + GI+YC S+K+CE +A+ L+ Q G+ A +YHA M + R ++ W +
Sbjct: 713 DLIKRDFAGL-CGIIYCLSKKQCEDIAEALKTQHGVKAHHYHAGMAKDDRIRIQADWQRG 771
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
K+ V+ T+AFGMGI+K +VRFV+H ++S S+E YYQE+GRAGRDG S C+L+F D
Sbjct: 772 KIHVVCATIAFGMGIDKANVRFVLHFTISGSLEAYYQETGRAGRDGGDSVCILYFNFNDT 831
Query: 425 PRQSSMV-----FYENSGLQNLY--DIVRYSQYPLHWNIEKVRLVIFEKL--QQVNLFC- 474
++ +E Q + D+V+Y+ + +V E +Q + C
Sbjct: 832 RLLYRLIDTGEGSHEQKQRQRAHVQDMVKYAFNTIDCRRTQVLQYFGETFAREQCHATCD 891
Query: 475 ----------MVVLAGHAQCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEI-------- 515
+V + +A+ II+L+++IQD + +T++ D + KLK++
Sbjct: 892 NCRKSGTGQELVNMTSYAKLIITLVREIQD-QKGITLVHCADIFRGSKLKKVVESGHDRL 950
Query: 516 -----DSDLKREEIEQLVLQLIID 534
S L R +IE+L LQ++ +
Sbjct: 951 AGFGAGSSLARTDIERL-LQIMCN 973
>gi|397162702|ref|ZP_10486172.1| ATP-dependent DNA helicase RecQ [Enterobacter radicincitans DSM
16656]
gi|396095746|gb|EJI93286.1| ATP-dependent DNA helicase RecQ [Enterobacter radicincitans DSM
16656]
Length = 608
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R QQ+II+ VLSGRD LV+M GGGKSLCYQ+PA++ +G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQQDIIDTVLSGRDCLVVMPTGGGKSLCYQIPALVLQGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQFDVINGCRNGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ +L + + L+++DEAHC SQWGHDFRP+Y LG L+ P VP MALTA
Sbjct: 128 LDN-FLDQLRQWNPV----LLAVDEAHCISQWGHDFRPEYAALGHLRQMLPSVPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D+ +L + + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRRDIERLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA +D R +V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGFSAAAYHAGLDNELRARVQEQFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|399215939|emb|CCF72627.1| unnamed protein product [Babesia microti strain RI]
Length = 706
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/359 (45%), Positives = 228/359 (63%), Gaps = 4/359 (1%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F+W + + VF +R Q EIIN+V+SG D ++ GGGK+LCYQLPA+ +G
Sbjct: 159 FDWSNEIKRINSEVFNNTGFRPMQLEIINSVISGNDTFALVPTGGGKTLCYQLPAIYSDG 218
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
I LV+SPL+SLIQDQV L L I + + I + L E +K+L+VTPE
Sbjct: 219 ITLVISPLISLIQDQVQRLEFLNISCASFPTEQEYFERLSIIEKLRNAE--IKVLFVTPE 276
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
KI SK F S L++ + L IDEAHC S WG DFRPDY +LG+L+ +PDVP++
Sbjct: 277 KIVSSKWFQSVLDELYSKELLVRFVIDEAHCISHWGSDFRPDYASLGVLRKCYPDVPILL 336
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTATAT V +DL+ ++ +R C F NRPNL + V KS K+ I+E+ Y++E Y
Sbjct: 337 LTATATSNVFDDLIRIMRLRNCQAFSCNFNRPNLKFKVVPKSRNTKLAIEELIGYVRE-Y 395
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
P S SGIVYC S ++CE V+ EL + GI++ +YHA +D R+ V W + + V+V T
Sbjct: 396 PTS-SGIVYCLSCQDCEFVSSELVKSGINSMHYHAQLDQLTRKHVQQSWMEGSINVVVAT 454
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
+AFGMGI+K +VRFVIH S+ KS+E Y+QE+GRAGRDG + C++ + D R S+V
Sbjct: 455 LAFGMGIDKSNVRFVIHFSMPKSIENYFQEAGRAGRDGELATCIVMYDYKDSQRLLSLV 513
>gi|424810032|ref|ZP_18235399.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus SX-4]
gi|342322670|gb|EGU18458.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus SX-4]
Length = 611
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 235/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L GRD LVIM GGGKSLCYQ+PA++REG+ LV+SPL+SL++
Sbjct: 23 VFGYQQFRVGQQEVIEAALQGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 83 DQVDQLKANGVAAECVNSTFAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP++P+MALTATA ++D+
Sbjct: 140 NL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+Y SR
Sbjct: 196 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYFGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 348
>gi|191166095|ref|ZP_03027930.1| ATP-dependent DNA helicase RecQ [Escherichia coli B7A]
gi|209921301|ref|YP_002295385.1| ATP-dependent DNA helicase RecQ [Escherichia coli SE11]
gi|300823362|ref|ZP_07103493.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 119-7]
gi|307313604|ref|ZP_07593224.1| ATP-dependent DNA helicase RecQ [Escherichia coli W]
gi|309796230|ref|ZP_07690640.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 145-7]
gi|331670669|ref|ZP_08371506.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA271]
gi|331679934|ref|ZP_08380597.1| ATP-dependent DNA helicase RecQ [Escherichia coli H591]
gi|378715260|ref|YP_005280153.1| ATP-dependent DNA helicase RecQ [Escherichia coli KO11FL]
gi|386611198|ref|YP_006126684.1| ATP-dependent DNA helicase [Escherichia coli W]
gi|386699326|ref|YP_006163163.1| ATP-dependent DNA helicase RecQ [Escherichia coli KO11FL]
gi|386711730|ref|YP_006175451.1| ATP-dependent DNA helicase RecQ [Escherichia coli W]
gi|416345829|ref|ZP_11679244.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4100B]
gi|417221737|ref|ZP_12025177.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.154]
gi|417241736|ref|ZP_12037493.1| ATP-dependent DNA helicase RecQ [Escherichia coli 9.0111]
gi|417269798|ref|ZP_12057158.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.3884]
gi|419947661|ref|ZP_14463980.1| ATP-dependent DNA helicase RecQ [Escherichia coli CUMT8]
gi|422778553|ref|ZP_16832201.1| ATP-dependent DNA helicase RecQ [Escherichia coli H120]
gi|423708132|ref|ZP_17682512.1| ATP-dependent DNA helicase recQ [Escherichia coli B799]
gi|432379058|ref|ZP_19622038.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE12]
gi|432762684|ref|ZP_19997145.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE48]
gi|432811570|ref|ZP_20045425.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE101]
gi|432829440|ref|ZP_20063054.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE135]
gi|432836825|ref|ZP_20070344.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE136]
gi|432965586|ref|ZP_20154507.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE203]
gi|433094218|ref|ZP_20280465.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE138]
gi|190903871|gb|EDV63585.1| ATP-dependent DNA helicase RecQ [Escherichia coli B7A]
gi|209914560|dbj|BAG79634.1| DNA helicase RecQ [Escherichia coli SE11]
gi|300524148|gb|EFK45217.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 119-7]
gi|306906585|gb|EFN37097.1| ATP-dependent DNA helicase RecQ [Escherichia coli W]
gi|308120112|gb|EFO57374.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 145-7]
gi|315063115|gb|ADT77442.1| ATP-dependent DNA helicase [Escherichia coli W]
gi|320198470|gb|EFW73071.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4100B]
gi|323380821|gb|ADX53089.1| ATP-dependent DNA helicase RecQ [Escherichia coli KO11FL]
gi|323943861|gb|EGB39955.1| ATP-dependent DNA helicase RecQ [Escherichia coli H120]
gi|331062142|gb|EGI34064.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA271]
gi|331072481|gb|EGI43813.1| ATP-dependent DNA helicase RecQ [Escherichia coli H591]
gi|383390853|gb|AFH15811.1| ATP-dependent DNA helicase RecQ [Escherichia coli KO11FL]
gi|383407422|gb|AFH13665.1| ATP-dependent DNA helicase RecQ [Escherichia coli W]
gi|385709045|gb|EIG46047.1| ATP-dependent DNA helicase recQ [Escherichia coli B799]
gi|386201539|gb|EII00530.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.154]
gi|386211853|gb|EII22304.1| ATP-dependent DNA helicase RecQ [Escherichia coli 9.0111]
gi|386228603|gb|EII55959.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.3884]
gi|388422564|gb|EIL82138.1| ATP-dependent DNA helicase RecQ [Escherichia coli CUMT8]
gi|430895567|gb|ELC17829.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE12]
gi|431315306|gb|ELG03229.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE48]
gi|431359645|gb|ELG46278.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE101]
gi|431381178|gb|ELG65810.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE136]
gi|431382069|gb|ELG66414.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE135]
gi|431476162|gb|ELH55956.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE203]
gi|431606692|gb|ELI76066.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE138]
Length = 611
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +++ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|422355837|ref|ZP_16436541.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 117-3]
gi|324016198|gb|EGB85417.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 117-3]
Length = 611
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +++ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|416052424|ref|ZP_11578281.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347992055|gb|EGY33485.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 629
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/340 (48%), Positives = 235/340 (69%), Gaps = 15/340 (4%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQEII+AVLSG+D LVIMA G GKSLCYQ+PA+ +G+ LVVSPL+SL+
Sbjct: 37 SVFGYQSFRKGQQEIIDAVLSGQDCLVIMATGTGKSLCYQIPALCFDGMTLVVSPLISLM 96
Query: 145 QDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSK 203
+DQV L A G+ A L ST T +E ++ +A+ G+LK+LY++PEK+ + F
Sbjct: 97 KDQVDQLRANGVEADYLNSTQTFEEQQQVQNRAIS---GQLKLLYLSPEKV-MANSFFQF 152
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ C ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+VP+MALTATA Q Q
Sbjct: 153 ISLC----QVSFIAIDEAHCISQWGHDFRPEYTQLGGLKGSFPNVPIMALTATADQTTQQ 208
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D+++ L + + +V + +RPN+ Y + EK ++++ +++ +SGIVYC
Sbjct: 209 DILKNLRLNRPHFYVGSFDRPNIRYTLVEKFKP----MEQLCRFVLAQ--KGKSGIVYCN 262
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SR + E++A+ L +G+ A YHA M+ REKV + ++ +QV+V T+AFGMGINK +
Sbjct: 263 SRNKVERIAETLCNKGVRAAAYHAGMENGLREKVQRDFQRDNIQVVVATIAFGMGINKSN 322
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 323 VRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 362
>gi|323303418|gb|EGA57213.1| Sgs1p [Saccharomyces cerevisiae FostersB]
Length = 1423
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/367 (43%), Positives = 237/367 (64%), Gaps = 16/367 (4%)
Query: 72 TFEWDSRADDV--RLN-VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAV 128
T+ W +D+V RL+ VF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPAV
Sbjct: 659 TYPW---SDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAV 715
Query: 129 LR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL 184
++ G +V+SPL+SL+QDQV L I M +S + E + + G L
Sbjct: 716 VKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKXSMFSSRGTAEQRRQTFNLF--INGLL 773
Query: 185 KMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ 244
++Y++PE IS S++ + + + G+L+ I +DEAHC S WGHDFRPDYK L K +
Sbjct: 774 DLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKRE 833
Query: 245 FPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEI 304
+PD+PM+ALTATA+++V+ D++ L +++ + + NR NL+Y V +K+ K I EI
Sbjct: 834 YPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKT---KNTIFEI 890
Query: 305 AKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKN 364
++ + N ++GI+YC S+K CEQ + ++++ GI YYHA M+ + R V W +
Sbjct: 891 CDAVKSRFKN-QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDI 1009
Query: 425 PRQSSMV 431
+M+
Sbjct: 1010 RTMQTMI 1016
>gi|300868275|ref|ZP_07112904.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
gi|300333710|emb|CBN58088.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
Length = 726
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 236/339 (69%), Gaps = 9/339 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG ++R Q+EI+ A LS RD+L++M GGGKSLC+QLPA+L+ G+ +VVSPL++L+
Sbjct: 21 HFFGYDSFRPGQREIVEAALSKRDMLIVMPTGGGKSLCFQLPALLKPGLTVVVSPLIALM 80
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L GI A L ST S + + A+ +G++K+LYV PE++ S+RF+ L
Sbjct: 81 QDQVESLRDNGIGATFLNSTLSLMETRSRETAIL--DGKIKLLYVAPERLL-SERFLPFL 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
++ + +S +IDEAHC S+WGHDFRPDY+ + ++ ++P +P+MALTATAT +V+ D
Sbjct: 138 DQVAASLGISAFAIDEAHCVSEWGHDFRPDYRQILQVRDRYPHIPIMALTATATDRVRLD 197
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+M+ L +R+ V++ NRPNL+Y VR K+ A+ +Q N SGI+YC S
Sbjct: 198 IMQQLALREPYIHVASFNRPNLYYEVRAKTK------HSFAELLQIIDKNGGSGIIYCLS 251
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK +++A +L+Q GISA YHA ++ + R R+ ++ +Q++V TVAFGMGINKPDV
Sbjct: 252 RKNVDELAYKLQQVGISALPYHAGLNDSDRTSNQTRFIRDDVQIMVATVAFGMGINKPDV 311
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV+H++L +++E YYQESGRAGRDG P++C+LF D
Sbjct: 312 RFVVHYNLPRNLEGYYQESGRAGRDGEPAQCILFLGYGD 350
>gi|25145561|ref|NP_502390.2| Protein HIM-6 [Caenorhabditis elegans]
gi|28201770|sp|O18017.2|BLM_CAEEL RecName: Full=Bloom syndrome protein homolog; AltName: Full=High
incidence of males protein 6; AltName: Full=RecQ
helicase homolog
gi|20853750|gb|AAM26298.1| RecQ helicase [Caenorhabditis elegans]
gi|22859109|emb|CAB05609.2| Protein HIM-6 [Caenorhabditis elegans]
Length = 988
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/372 (46%), Positives = 230/372 (61%), Gaps = 13/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q++ I + L G D V+M G GKSLCYQLPAV+ G+ +VVSPL SLI+D
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 302
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q M + LGI LT+ ++ IY L G +K+LYVTPEKIS S R S
Sbjct: 303 QKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFD 362
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF--PDVPMMALTATATQKVQND 264
H G L+ IDEAHC SQWGHDFRPDY L L+ ++ P VP++ALTATAT K+ D
Sbjct: 363 LHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLSSLREKYANPPVPIIALTATATPKIVTD 422
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ L ++ F+S+ R NL Y + K++ + +I+ + K +++ YP +SGIVYC S
Sbjct: 423 ARDHLKMQNSKLFISSFVRDNLKYDLIPKAA--RSLINVVEK-MKQLYPG-KSGIVYCLS 478
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RKECE V L + G+SA+ YHA ++ N R V W NK VI T+AFGMGI+KPDV
Sbjct: 479 RKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDV 538
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG------- 437
RFVIH+SL KS+E YYQE+GRAGRDG+PS CL+ + D R M+ N+
Sbjct: 539 RFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNTTTGVRSMH 598
Query: 438 LQNLYDIVRYSQ 449
L N+ +V Y +
Sbjct: 599 LNNVLQVVAYCE 610
>gi|341891934|gb|EGT47869.1| hypothetical protein CAEBREN_30811 [Caenorhabditis brenneri]
Length = 978
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/372 (46%), Positives = 229/372 (61%), Gaps = 13/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q++ I + L G D V+M G GKSLCYQLPAV+ G+ +VVSPL SLI+D
Sbjct: 234 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 293
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q M + LGI LT+ + + IY L +K+LYVTPEKIS S R S
Sbjct: 294 QKMKMKELGIGCEALTADLTASAHEEIYSDLSSENPTIKLLYVTPEKISASGRLSSVFYT 353
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF--PDVPMMALTATATQKVQND 264
H G L+ IDEAHC SQWGHDFRPDY L L+ ++ P VP++ALTATAT K+ D
Sbjct: 354 LHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLNTLREKYNNPPVPIIALTATATPKIVTD 413
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ L ++ F+S+ R NL Y + K++ K +++ + K +++ YP +SGIVYC S
Sbjct: 414 ARDHLKMQDSKLFISSFVRDNLKYDLIPKAA--KSLVNVVEK-MKQLYP-GKSGIVYCLS 469
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RKECE V L + G+SA+ YHA ++ N R V W NK VI T+AFGMGI+KPDV
Sbjct: 470 RKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQKSWLANKFDVICATIAFGMGIDKPDV 529
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG------- 437
RFVIH+SL KS+E YYQE+GRAGRDG+PS CL+ + D R M+ N+
Sbjct: 530 RFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNTTTGVRSMH 589
Query: 438 LQNLYDIVRYSQ 449
L N+ +V Y +
Sbjct: 590 LNNVLQVVAYCE 601
>gi|238793565|ref|ZP_04637189.1| ATP-dependent DNA helicase recQ [Yersinia intermedia ATCC 29909]
gi|238727155|gb|EEQ18685.1| ATP-dependent DNA helicase recQ [Yersinia intermedia ATCC 29909]
Length = 610
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 235/340 (69%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEIINA LSG+D LV+M GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++ F+ +L
Sbjct: 79 KDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES-FLDQL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FPD+P++ALTATA + + D
Sbjct: 136 ----YQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEATRGD 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L++ + + +S+ +RPN+ Y + EK +D++ +++Q+ +SGI+YC S
Sbjct: 192 IVRLLNLDQPLIQISSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRGQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADM 345
>gi|326514896|dbj|BAJ99809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 222/333 (66%), Gaps = 4/333 (1%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q E I AVLSGRD +M GGGKS+CYQ+PA+++ G+ LV+SPL++L+++
Sbjct: 32 FGYSEFRGRQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALVKTGVVLVISPLIALMEN 91
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + GIPA L+ST + ++ I++ L+ G LK+LYVTPE ++ S F +KL K
Sbjct: 92 QVSSLKSKGIPAEFLSSTQTTANKNKIHEDLDSGRPSLKLLYVTPELVATSG-FKAKLTK 150
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H+ G L L++IDEAHC S WGHDFRP Y+ + L+ QFPD+P++ALTATA KVQ D++
Sbjct: 151 LHNRGLLGLVAIDEAHCISTWGHDFRPSYRKISSLRKQFPDIPILALTATAVPKVQKDVI 210
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L ++ + ++ NRPN+FY VR K + V D I+ ++ S + I+YC R
Sbjct: 211 SSLSLQNPVILKASFNRPNIFYEVRYKDLLDDVFSD-ISNLLKSS--GNVCSIIYCLERA 267
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
C+ + L Q+GIS+ YHA ++ R V W ++ QV+V TVAFGMGI++ DVR
Sbjct: 268 ACDDLTMHLSQQGISSAAYHAGLNSKVRTTVLDDWLSSRTQVVVATVAFGMGIDRHDVRI 327
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
V H +L KS+E++YQESGRAGRD PS +L++
Sbjct: 328 VCHFNLPKSMESFYQESGRAGRDQQPSRSVLYY 360
>gi|260596045|ref|YP_003208616.1| ATP-dependent DNA helicase RecQ [Cronobacter turicensis z3032]
gi|260215222|emb|CBA27089.1| ATP-dependent DNA helicase recQ [Cronobacter turicensis z3032]
Length = 635
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 234/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 32 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 91
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S++++ + GE +++LY+ P
Sbjct: 92 GLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSRDEQHAVMAGCRTGE--VRLLYIAP 149
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP +
Sbjct: 150 ERLMMDN-FIDTLGYWD----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFI 204
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 205 ALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 260
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 261 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 318
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 319 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 371
>gi|440756898|ref|ZP_20936098.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
gi|440172927|gb|ELP52411.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
Length = 701
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 236/342 (69%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + ++ E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRDRESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y VR K+S ++ +YI+ SGIVYC
Sbjct: 188 EDIIQQLGLRDASIHIASFNRPNLYYEVRAKTSKS---YQQLYQYIK---GQKGSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK +QVA++L++ GI+A YHA M+ R + R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDQVAEQLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFV+H+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|419938599|ref|ZP_14455425.1| ATP-dependent DNA helicase RecQ [Escherichia coli 75]
gi|388409947|gb|EIL70208.1| ATP-dependent DNA helicase RecQ [Escherichia coli 75]
Length = 611
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQLLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|262273198|ref|ZP_06051014.1| ATP-dependent DNA helicase RecQ [Grimontia hollisae CIP 101886]
gi|262222776|gb|EEY74085.1| ATP-dependent DNA helicase RecQ [Grimontia hollisae CIP 101886]
Length = 616
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/339 (47%), Positives = 232/339 (68%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +YR Q+EII+A + GRD LVIM GGGKSLCYQ+PA++R+G+ +V+SPL+SL++
Sbjct: 23 VFGYHSYRDGQKEIIDATIGGRDALVIMPTGGGKSLCYQIPALVRDGVTIVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A L S+ + E + ++AL G LK+LYV+PE+I + F+ +L+
Sbjct: 83 DQVDQLLANGVQAACLNSSMTPESQSDTWQALRNGN--LKLLYVSPERILM-RDFIERLQ 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
A L LI++DEAHC SQWGHDFRP+Y LG LK FP VP+MALTATA + D+
Sbjct: 140 ----AVTLGLIAVDEAHCISQWGHDFRPEYAQLGSLKQHFPGVPVMALTATADDTTRQDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L + ++ + +RPN+ Y + EK + ++ +++ + +SGIVYC SR
Sbjct: 196 CQRLALVDPHIYLGSFDRPNIRYTLVEKHKP----LAQLTQFLATQ--SGQSGIVYCNSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K EQVA++L I A YHA M + R V + ++ +Q++V TVAFGMGINKP+VR
Sbjct: 250 KRVEQVAEKLMGSNIRAAAYHAGMTADQRAWVQEAFQRDDVQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H+ + +++E+YYQE+GRAGRDGLP+E +LF+ P+D+
Sbjct: 310 FVVHYDIPRNIESYYQETGRAGRDGLPAEAILFYDPSDI 348
>gi|309784542|ref|ZP_07679180.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1617]
gi|308927648|gb|EFP73117.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1617]
Length = 609
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST +E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQIREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|392553532|ref|ZP_10300669.1| ATP-dependent DNA helicase [Pseudoalteromonas spongiae
UST010723-006]
Length = 607
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/342 (45%), Positives = 236/342 (69%), Gaps = 13/342 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +RA Q+++I+AVL+G+D LV+M GGGKSLCYQ+PA+L GI +VVSPL+SL+
Sbjct: 22 SVFGYKQFRAGQEQVIDAVLAGQDCLVLMPTGGGKSLCYQVPALLLPGITIVVSPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L A G+ A + ++ S+E+++ IY+ L +G++K+LYV PE++ + F ++L
Sbjct: 82 QDQVAQLKAQGVAAAYINNSQSREEQQLIYQGLH--QGQIKILYVAPERLL-TDDFSTRL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ + + L +IDEAHC S WGHDFRP Y LG LK +F +P+MALTATA +ND
Sbjct: 139 QHLN----IGLFAIDEAHCVSHWGHDFRPHYYRLGQLKQRFSHIPIMALTATADIATRND 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + + + +RPN+ Y + EK + ++ ++++E +SGI+YC S
Sbjct: 195 IVMQLGLTNAHIYTGSFDRPNIRYTIEEKFKP----LSQLMRFLKEQ--KGQSGIIYCSS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK + +A++L G +A YHA ++ R V ++++ + ++V TVAFGMGINKP+V
Sbjct: 249 RKRVDDIAEKLVDAGYNAASYHAGLENEQRSFVQNAFARDDIHIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
RFVIH+ + K++E+YYQE+GRAGRDGL +E +++F PADVPR
Sbjct: 309 RFVIHYDIPKNIESYYQETGRAGRDGLSAEAIMYFDPADVPR 350
>gi|82778997|ref|YP_405346.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae Sd197]
gi|81243145|gb|ABB63855.1| ATP-dependent DNA helicase [Shigella dysenteriae Sd197]
Length = 611
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST +E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQIREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|22124312|ref|NP_667735.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM10+]
gi|45442967|ref|NP_994506.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Microtus
str. 91001]
gi|51594557|ref|YP_068748.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
32953]
gi|108806187|ref|YP_650103.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Antiqua]
gi|108810297|ref|YP_646064.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Nepal516]
gi|145600700|ref|YP_001164776.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Pestoides F]
gi|153947607|ref|YP_001399215.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
31758]
gi|153997111|ref|ZP_02022244.1| ATP-dependent DNA helicase [Yersinia pestis CA88-4125]
gi|162418857|ref|YP_001605148.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Angola]
gi|165926240|ref|ZP_02222072.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939115|ref|ZP_02227666.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011675|ref|ZP_02232573.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213635|ref|ZP_02239670.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167401854|ref|ZP_02307342.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167421077|ref|ZP_02312830.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426281|ref|ZP_02318034.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469646|ref|ZP_02334350.1| ATP-dependent DNA helicase RecQ [Yersinia pestis FV-1]
gi|218930836|ref|YP_002348711.1| ATP-dependent DNA helicase RecQ [Yersinia pestis CO92]
gi|229837162|ref|ZP_04457327.1| ATP-dependent DNA helicase [Yersinia pestis Pestoides A]
gi|229839522|ref|ZP_04459681.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229900085|ref|ZP_04515222.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229900469|ref|ZP_04515598.1| ATP-dependent DNA helicase [Yersinia pestis Nepal516]
gi|270488824|ref|ZP_06205898.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM D27]
gi|294505497|ref|YP_003569559.1| ATP-dependent DNA helicase [Yersinia pestis Z176003]
gi|384123966|ref|YP_005506586.1| ATP-dependent DNA helicase [Yersinia pestis D106004]
gi|384127827|ref|YP_005510441.1| ATP-dependent DNA helicase [Yersinia pestis D182038]
gi|384138308|ref|YP_005521010.1| ATP-dependent DNA helicase RecQ [Yersinia pestis A1122]
gi|384413065|ref|YP_005622427.1| ATP-dependent DNA helicase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420549046|ref|ZP_15046797.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-01]
gi|420554379|ref|ZP_15051553.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-02]
gi|420560006|ref|ZP_15056434.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-03]
gi|420565382|ref|ZP_15061272.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-04]
gi|420581390|ref|ZP_15075799.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-07]
gi|420586787|ref|ZP_15080681.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-08]
gi|420591869|ref|ZP_15085252.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-09]
gi|420597248|ref|ZP_15090090.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-10]
gi|420602944|ref|ZP_15095145.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-11]
gi|420608335|ref|ZP_15100039.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-12]
gi|420613725|ref|ZP_15104865.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-13]
gi|420619086|ref|ZP_15109540.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-14]
gi|420624397|ref|ZP_15114328.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-15]
gi|420629378|ref|ZP_15118846.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-16]
gi|420639815|ref|ZP_15128223.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-25]
gi|420645253|ref|ZP_15133196.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-29]
gi|420650581|ref|ZP_15137995.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-32]
gi|420661646|ref|ZP_15147913.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-36]
gi|420666997|ref|ZP_15152736.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-42]
gi|420671856|ref|ZP_15157169.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-45]
gi|420682761|ref|ZP_15167043.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-47]
gi|420688171|ref|ZP_15171857.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-48]
gi|420693441|ref|ZP_15176465.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-52]
gi|420699163|ref|ZP_15181511.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-53]
gi|420705063|ref|ZP_15186161.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-54]
gi|420710327|ref|ZP_15190893.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-55]
gi|420721372|ref|ZP_15200506.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-58]
gi|420726804|ref|ZP_15205306.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-59]
gi|420732302|ref|ZP_15210251.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-60]
gi|420737293|ref|ZP_15214760.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-61]
gi|420742774|ref|ZP_15219685.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-63]
gi|420753919|ref|ZP_15229361.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-65]
gi|420765089|ref|ZP_15238752.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-71]
gi|420780906|ref|ZP_15252870.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-88]
gi|420797138|ref|ZP_15267335.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-91]
gi|420802233|ref|ZP_15271911.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-92]
gi|420812973|ref|ZP_15281585.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-94]
gi|420818445|ref|ZP_15286557.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-95]
gi|420823785|ref|ZP_15291325.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-96]
gi|420828848|ref|ZP_15295891.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-98]
gi|420834430|ref|ZP_15300927.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-99]
gi|420839377|ref|ZP_15305399.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-100]
gi|420844579|ref|ZP_15310118.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-101]
gi|420850225|ref|ZP_15315189.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-102]
gi|420855965|ref|ZP_15320020.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-103]
gi|420861052|ref|ZP_15324517.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-113]
gi|421765358|ref|ZP_16202143.1| ATP-dependent DNA helicase RecQ [Yersinia pestis INS]
gi|21957085|gb|AAM83986.1|AE013640_5 ATP-dependent DNA helicase [Yersinia pestis KIM10+]
gi|45437834|gb|AAS63383.1| ATP-dependent DNA helicase [Yersinia pestis biovar Microtus str.
91001]
gi|51587839|emb|CAH19442.1| ATP-dependent DNA helicase [Yersinia pseudotuberculosis IP 32953]
gi|108773945|gb|ABG16464.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Nepal516]
gi|108778100|gb|ABG12158.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Antiqua]
gi|115349447|emb|CAL22420.1| ATP-dependent DNA helicase [Yersinia pestis CO92]
gi|145212396|gb|ABP41803.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Pestoides F]
gi|149289417|gb|EDM39495.1| ATP-dependent DNA helicase [Yersinia pestis CA88-4125]
gi|152959102|gb|ABS46563.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
31758]
gi|162351672|gb|ABX85620.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Angola]
gi|165912888|gb|EDR31514.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921764|gb|EDR38961.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989444|gb|EDR41745.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205308|gb|EDR49788.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961206|gb|EDR57227.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048747|gb|EDR60155.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167054800|gb|EDR64604.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229682488|gb|EEO78575.1| ATP-dependent DNA helicase [Yersinia pestis Nepal516]
gi|229686865|gb|EEO78944.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695888|gb|EEO85935.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229706105|gb|EEO92114.1| ATP-dependent DNA helicase [Yersinia pestis Pestoides A]
gi|262363562|gb|ACY60283.1| ATP-dependent DNA helicase [Yersinia pestis D106004]
gi|262367491|gb|ACY64048.1| ATP-dependent DNA helicase [Yersinia pestis D182038]
gi|270337328|gb|EFA48105.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM D27]
gi|294355956|gb|ADE66297.1| ATP-dependent DNA helicase [Yersinia pestis Z176003]
gi|320013569|gb|ADV97140.1| ATP-dependent DNA helicase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342853437|gb|AEL71990.1| ATP-dependent DNA helicase RecQ [Yersinia pestis A1122]
gi|391421158|gb|EIQ83878.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-01]
gi|391421371|gb|EIQ84073.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-02]
gi|391421448|gb|EIQ84143.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-03]
gi|391436188|gb|EIQ97169.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-04]
gi|391453252|gb|EIR12582.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-07]
gi|391453411|gb|EIR12729.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-08]
gi|391455260|gb|EIR14393.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-09]
gi|391469060|gb|EIR26879.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-10]
gi|391469818|gb|EIR27555.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-11]
gi|391471272|gb|EIR28850.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-12]
gi|391484954|gb|EIR41152.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-13]
gi|391486455|gb|EIR42485.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-15]
gi|391486548|gb|EIR42569.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-14]
gi|391501084|gb|EIR55520.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-16]
gi|391506158|gb|EIR60104.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-25]
gi|391517115|gb|EIR69950.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-29]
gi|391518917|gb|EIR71596.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-32]
gi|391531438|gb|EIR82932.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-36]
gi|391534305|gb|EIR85494.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-42]
gi|391536661|gb|EIR87623.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-45]
gi|391550077|gb|EIR99727.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-47]
gi|391550347|gb|EIR99969.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-48]
gi|391564613|gb|EIS12805.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-52]
gi|391566044|gb|EIS14081.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-53]
gi|391569386|gb|EIS16980.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-54]
gi|391579599|gb|EIS25700.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-55]
gi|391591637|gb|EIS36175.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-58]
gi|391595137|gb|EIS39212.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-60]
gi|391595868|gb|EIS39867.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-59]
gi|391609696|gb|EIS52066.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-61]
gi|391610048|gb|EIS52385.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-63]
gi|391623135|gb|EIS63973.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-65]
gi|391633409|gb|EIS72815.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-71]
gi|391648413|gb|EIS85930.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-88]
gi|391666018|gb|EIT01535.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-91]
gi|391675612|gb|EIT10109.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-92]
gi|391675850|gb|EIT10329.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-94]
gi|391689548|gb|EIT22669.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-95]
gi|391691498|gb|EIT24422.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-96]
gi|391693223|gb|EIT25990.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-98]
gi|391706602|gb|EIT38024.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-99]
gi|391707573|gb|EIT38908.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-100]
gi|391710357|gb|EIT41433.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-101]
gi|391722570|gb|EIT52360.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-102]
gi|391722697|gb|EIT52473.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-103]
gi|391723511|gb|EIT53184.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-113]
gi|411173338|gb|EKS43383.1| ATP-dependent DNA helicase RecQ [Yersinia pestis INS]
Length = 610
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 235/340 (69%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEIINA LSG+D LV+M GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++ F+ +L
Sbjct: 79 KDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES-FLDQL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FPD+P++ALTATA + + D
Sbjct: 136 ----YQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEATRGD 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L++ + + +S+ +RPN+ Y + EK +D++ +++Q+ +SGI+YC S
Sbjct: 192 IVRLLNLDQPLIQISSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADM 345
>gi|260870546|ref|YP_003236948.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H- str.
11128]
gi|415821875|ref|ZP_11510656.1| ATP-dependent DNA helicase RecQ [Escherichia coli OK1180]
gi|417594293|ref|ZP_12244979.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2534-86]
gi|419199610|ref|ZP_13742897.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8A]
gi|419206760|ref|ZP_13749897.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8B]
gi|419219119|ref|ZP_13762084.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8E]
gi|419892091|ref|ZP_14412124.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9570]
gi|419893745|ref|ZP_14413707.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9574]
gi|420088554|ref|ZP_14600425.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9602]
gi|420094057|ref|ZP_14605670.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9634]
gi|424768555|ref|ZP_18195825.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257766902|dbj|BAI38397.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H- str.
11128]
gi|323177836|gb|EFZ63420.1| ATP-dependent DNA helicase RecQ [Escherichia coli OK1180]
gi|345331400|gb|EGW63860.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2534-86]
gi|378039987|gb|EHW02463.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8B]
gi|378042931|gb|EHW05375.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8A]
gi|378074570|gb|EHW36605.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8E]
gi|388348402|gb|EIL14007.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9570]
gi|388366194|gb|EIL29940.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9574]
gi|394389845|gb|EJE66943.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9602]
gi|394397257|gb|EJE73536.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9634]
gi|421945970|gb|EKU03140.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 609
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQVNGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|432871713|ref|ZP_20091743.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE147]
gi|431407675|gb|ELG90884.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE147]
Length = 611
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G++++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGC--CTGQIRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|347541663|ref|YP_004849089.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania sp. NH8B]
gi|345644842|dbj|BAK78675.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania sp. NH8B]
Length = 600
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 217/612 (35%), Positives = 326/612 (53%), Gaps = 66/612 (10%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
VFG PA+R Q EI+ V G + LV+M GGGKSLCYQ+PA+LREG+A+VVSPL++L+
Sbjct: 10 TVFGYPAFRGEQAEIVAHVGGGGNALVLMPTGGGKSLCYQIPALLREGVAIVVSPLIALM 69
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L+ LG+ A L S T+ ++ + I + + G L +LYV PE++ + RF+ L
Sbjct: 70 QDQVATLSELGVAAACLNSATAPDEARDIVR--QARAGTLDLLYVAPERL-LTPRFLELL 126
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
R++L +IDEAHC S WGHDFRP+Y+ LGIL +FP VP +ALTATA ++ + D
Sbjct: 127 NDL----RIALFAIDEAHCVSHWGHDFRPEYQQLGILAERFPAVPRIALTATADEQTRAD 182
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + + F+S+ +RPNLFY V EK + K ++ +IQ+ YP + SGIVYC S
Sbjct: 183 ILHYLRLAEARVFLSSFDRPNLFYQVVEKHNAKK----QLLAFIQQDYPGA-SGIVYCLS 237
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK E AQ L + GI A YHA + R++ + + V+V TVAFGMGI+KPDV
Sbjct: 238 RKRVEDTAQWLVENGIRALPYHAGLGHEVRDRHQREFLREDGVVMVATVAFGMGIDKPDV 297
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDI 444
RFV H L KS E +YQESGRAGRDGLP+ L + D+ + + M+ E S + L
Sbjct: 298 RFVAHIDLPKSPENFYQESGRAGRDGLPAASWLCYGLNDMVQLTQMI--EGSEMAALQKQ 355
Query: 445 VRYSQYPLHWNIEKV----RLVIFEKLQQVNLFCMVVLAGHAQCIIS------------- 487
V S+ + R I + + C GH ++
Sbjct: 356 VELSKLDAMLAFCETAACRRQHILAHFSEQSAPC-----GHCDNCLNPPVTFDATLPVQK 410
Query: 488 LLQDIQDNNQRLTMLQLVDKM--------------KIKLKEIDSDLKREEIEQLVLQLII 533
LL I QR ++D + ++ I +L + ++ QL+
Sbjct: 411 LLSCIYRVEQRFAASHVIDVLLGRANQSVTAFGHDQLSTFGIGRELNQRGWRSIIRQLVA 470
Query: 534 DRVL-VRIGP-----FSPG-KKIIKLEISSVQKNTADNKKS----TKRSLTSSALEFELD 582
++L V I F G + I+K E + AD+KKS T R L + E
Sbjct: 471 KKLLQVDIARGQSLVFGDGCRAILKGEQKVYLRPLADDKKSRSANTDRWLRTEREERLWQ 530
Query: 583 ELRKELASISG--GILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKYGSR 640
LR+ S++ + ++V S + +R + ++P++ E + +G+LK +YG
Sbjct: 531 MLRRWRKSMADEHNVPAYAVFSDKTLRELVEKRPASRVEIGRVY---GLGELKLARYGDA 587
Query: 641 ILEVISKCGNSE 652
+L ++++ S+
Sbjct: 588 LLAILNEASQSD 599
>gi|387614520|ref|YP_006117636.1| ATP-dependent DNA helicase [Escherichia coli ETEC H10407]
gi|309704256|emb|CBJ03604.1| ATP-dependent DNA helicase [Escherichia coli ETEC H10407]
Length = 609
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+ GI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KPGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|404377215|ref|ZP_10982353.1| ATP-dependent DNA helicase recQ [Escherichia sp. 1_1_43]
gi|422769226|ref|ZP_16822947.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1520]
gi|226838725|gb|EEH70753.1| ATP-dependent DNA helicase recQ [Escherichia sp. 1_1_43]
gi|323934125|gb|EGB30560.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1520]
Length = 611
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+ GI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KPGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|417202238|ref|ZP_12018488.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0522]
gi|417217784|ref|ZP_12023658.1| ATP-dependent DNA helicase RecQ [Escherichia coli JB1-95]
gi|386187125|gb|EIH75948.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0522]
gi|386193223|gb|EIH87519.1| ATP-dependent DNA helicase RecQ [Escherichia coli JB1-95]
Length = 611
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQVNGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|432619136|ref|ZP_19855233.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE75]
gi|431150651|gb|ELE51701.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE75]
Length = 604
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 5 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 64
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 65 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 122
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 123 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 177
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 178 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 231
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 232 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAF 291
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 292 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 340
>gi|331685543|ref|ZP_08386127.1| ATP-dependent DNA helicase RecQ [Escherichia coli H299]
gi|331077244|gb|EGI48458.1| ATP-dependent DNA helicase RecQ [Escherichia coli H299]
Length = 611
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|225444694|ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
vinifera]
Length = 730
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/333 (47%), Positives = 222/333 (66%), Gaps = 4/333 (1%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q E I A+LSGRD +M GGGKS+CYQ+PA+ + GI LVV PL++L+++
Sbjct: 32 FGHAEFRGRQLEAIEAILSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVCPLIALMEN 91
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QVM L GI A L+ST + + I++ L+ G+ L++LYVTPE I+ + FMS+L K
Sbjct: 92 QVMALKEKGIAAEFLSSTQTTKVRDKIHEDLQSGKPSLRLLYVTPELIA-TPGFMSRLTK 150
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H G L+LI+IDEAHC S WGHDFRP Y+ L L+ PDVP++ALTATA KVQ D++
Sbjct: 151 IHARGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPILALTATAVPKVQKDVI 210
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
E L ++ + S+ NRPN++Y VR K + V D ++K ++ + GIVYC R
Sbjct: 211 ESLCLQNPLVLKSSFNRPNIYYEVRYKDLLDDVYAD-LSKLLKSC--GNVCGIVYCLERT 267
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
C++++ L + GIS+ YHA ++ R V W +K+QV+V TVAFGMGI++ DVR
Sbjct: 268 TCDELSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRI 327
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
V H ++ KS+E +YQESGRAGRD LPS LL++
Sbjct: 328 VCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYY 360
>gi|218550953|ref|YP_002384744.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii ATCC 35469]
gi|416900390|ref|ZP_11929665.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_7v]
gi|417117601|ref|ZP_11968462.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1.2741]
gi|422803414|ref|ZP_16851902.1| ATP-dependent DNA helicase RecQ [Escherichia coli M863]
gi|422808185|ref|ZP_16856611.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii B253]
gi|450195654|ref|ZP_21892608.1| ATP-dependent DNA helicase RecQ [Escherichia coli SEPT362]
gi|218358494|emb|CAQ91141.1| ATP-dependent DNA helicase [Escherichia fergusonii ATCC 35469]
gi|323964066|gb|EGB59556.1| ATP-dependent DNA helicase RecQ [Escherichia coli M863]
gi|324111045|gb|EGC05032.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii B253]
gi|327250673|gb|EGE62379.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_7v]
gi|386140145|gb|EIG81300.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1.2741]
gi|449316195|gb|EMD06316.1| ATP-dependent DNA helicase RecQ [Escherichia coli SEPT362]
Length = 609
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|170026209|ref|YP_001722714.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis YPIII]
gi|186893559|ref|YP_001870671.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis PB1/+]
gi|420570412|ref|ZP_15065845.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-05]
gi|420576075|ref|ZP_15070964.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-06]
gi|420634593|ref|ZP_15123519.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-19]
gi|420656190|ref|ZP_15143047.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-34]
gi|420677196|ref|ZP_15162026.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-46]
gi|420715828|ref|ZP_15195768.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-56]
gi|420748668|ref|ZP_15224634.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-64]
gi|420759919|ref|ZP_15234148.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-66]
gi|420770307|ref|ZP_15243422.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-72]
gi|420775288|ref|ZP_15247941.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-76]
gi|420786536|ref|ZP_15257793.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-89]
gi|420791561|ref|ZP_15262319.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-90]
gi|420807567|ref|ZP_15276750.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-93]
gi|169752743|gb|ACA70261.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis YPIII]
gi|186696585|gb|ACC87214.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis PB1/+]
gi|391437458|gb|EIQ98312.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-05]
gi|391441078|gb|EIR01593.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-06]
gi|391501167|gb|EIR55597.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-19]
gi|391518233|gb|EIR70963.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-34]
gi|391549862|gb|EIR99531.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-46]
gi|391581169|gb|EIS27080.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-56]
gi|391611365|gb|EIS53551.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-64]
gi|391626018|gb|EIS66438.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-66]
gi|391635100|gb|EIS74299.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-72]
gi|391645325|gb|EIS83215.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-76]
gi|391652808|gb|EIS89836.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-89]
gi|391658455|gb|EIS94858.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-90]
gi|391675277|gb|EIT09812.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-93]
Length = 597
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 235/340 (69%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEIINA LSG+D LV+M GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 6 DTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLM 65
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++ F+ +L
Sbjct: 66 KDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES-FLDQL 122
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FPD+P++ALTATA + + D
Sbjct: 123 ----YQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEATRGD 178
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L++ + + +S+ +RPN+ Y + EK +D++ +++Q+ +SGI+YC S
Sbjct: 179 IVRLLNLDQPLIQISSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSGIIYCNS 232
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 233 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 292
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 293 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADM 332
>gi|157144447|ref|YP_001451766.1| ATP-dependent DNA helicase RecQ [Citrobacter koseri ATCC BAA-895]
gi|157081652|gb|ABV11330.1| hypothetical protein CKO_00161 [Citrobacter koseri ATCC BAA-895]
Length = 609
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/346 (46%), Positives = 231/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V FG +R Q+EII V+SGRD LV+M GGGKSLCYQ+PA+L G+ +VVS
Sbjct: 13 AKQVLQETFGYQQFRPGQEEIIETVVSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQSREQQHEVMAGCRTGQ--VRLLYIAPERLMLD- 129
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTATA
Sbjct: 130 ---NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPSLPFMALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SG
Sbjct: 186 DTTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGISA YHA ++ N R V ++ ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|281420257|ref|ZP_06251256.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
gi|281405752|gb|EFB36432.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
Length = 620
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/367 (47%), Positives = 240/367 (65%), Gaps = 18/367 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R NQ+ II V+ G D LV+M GGGKSLCYQ+PA+ EG A+V+SPL+SL+ D
Sbjct: 11 FGYDSFRPNQEAIIKEVMQGHDCLVLMPTGGGKSLCYQVPALAMEGTAVVISPLISLMHD 70
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEK-ISKSKRFMSKLE 205
QV L A GIPA L S DE I + EKGE LK+LYV+PEK IS+ S +
Sbjct: 71 QVEALKANGIPAEALNSGNDTTDELIIRRRCEKGE--LKLLYVSPEKLISEIPYLFSNI- 127
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
++SL ++DEAHC SQWGHDFRP+Y LG+L F +VP+MALTATA + + D+
Sbjct: 128 ------KISLFAVDEAHCISQWGHDFRPEYSQLGMLHENFRNVPVMALTATADKITREDI 181
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ LH+ FVS+ +RPNL VR++S+ K + I ++I ++P E+GI+YC SR
Sbjct: 182 IRQLHLNG-QTFVSSFDRPNLSLTVRQEST-KKAKLQYITRFIS-NHP-EEAGIIYCLSR 237
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K E VAQEL GI+A YHA M R V R+ +++QV+ T+AFGMGI+K +VR
Sbjct: 238 KNTEMVAQELIDLGINAAAYHAGMTAQTRASVQERFKMDQIQVVCATIAFGMGIDKSNVR 297
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ--NLYD 443
+VIH+++ KS+E++YQE GRAGRDG PS+ +LF+ AD+ S F E SG + N+
Sbjct: 298 WVIHYNMPKSIESFYQEIGRAGRDGAPSDTVLFYSMADIITLRS--FCEESGQRDVNMEK 355
Query: 444 IVRYSQY 450
+ R +Y
Sbjct: 356 LRRMEEY 362
>gi|254443570|ref|ZP_05057046.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
gi|198257878|gb|EDY82186.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
Length = 616
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/345 (46%), Positives = 230/345 (66%), Gaps = 13/345 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q EI+ L+GRDV ++ GGGKSLCYQLPAVL EG+ +V+SPL++L++D
Sbjct: 17 FGHDTFRPLQAEIVADALAGRDVFALLPTGGGKSLCYQLPAVLSEGLTVVISPLIALMKD 76
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L GI A L S+ K+D Y L G+ ++LYV PE++ F+ L+K
Sbjct: 77 QVDGLTENGIAATFLNSSLGKKDAAQRYAKLFAGD--YQVLYVAPERLMLGG-FLEDLKK 133
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
++ ++DEAHC S+WGHDFRP+Y+ L L+ +FPD P MALTATAT +V+ D++
Sbjct: 134 W----KVCRFAVDEAHCISEWGHDFRPEYRQLAELRKRFPDTPFMALTATATDRVRGDIV 189
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
+ L + +V++ NRPNL Y + +K +V + +I K+++ S P ESGI+YCFSRK
Sbjct: 190 KQLQLHDPTDYVASFNRPNLAYRIEQKQAVFR----QILKFVK-SRP-FESGIIYCFSRK 243
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EQ A LRQ G+ A YHA M R K + +++++V+ T+AFGMGI+KP+VR+
Sbjct: 244 ATEQTADRLRQEGVEAIAYHAGMTPLQRAKNQDAFIRDEVKVVCATIAFGMGIDKPNVRY 303
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
VIH + K++E YYQE+GRAGRDGLPSEC+++F P DV +Q + +
Sbjct: 304 VIHQDIPKNIEGYYQETGRAGRDGLPSECVMYFSPGDVAKQLNFI 348
>gi|417664450|ref|ZP_12314029.1| ATP-dependent DNA helicase RecQ [Escherichia coli AA86]
gi|330908124|gb|EGH36643.1| ATP-dependent DNA helicase RecQ [Escherichia coli AA86]
Length = 609
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDSLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P +ALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFIALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|37528437|ref|NP_931782.1| ATP-dependent DNA helicase RecQ [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787875|emb|CAE16992.1| ATP-dependent DNA helicase RecQ [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 608
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 243/348 (69%), Gaps = 13/348 (3%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A+ V FG +R+ QQ++I+ +L GRD LVIM GGGKSLCYQ+PA+++EG+ LV
Sbjct: 11 SLAEQVLRKTFGYLQFRSGQQQVIDTILEGRDCLVIMPTGGGKSLCYQIPALVQEGVTLV 70
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
VSPL+SL++DQV L A G+ A L ST ++E + + + +G +K+LY+ PE++
Sbjct: 71 VSPLISLMKDQVDQLRANGVAADCLNSTQAREQQIDVIRRCR--QGMIKLLYIAPERLMM 128
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
F+ +L + A ++++DEAHC SQWGHDFRP+Y+ LG L+ +FP +P++ALTAT
Sbjct: 129 DN-FLEQLLEWQPA----MLAVDEAHCISQWGHDFRPEYRALGQLRQRFPTLPVIALTAT 183
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A + +ND++ +L++ + +S+ +RPN+ Y + EK +D++ +I+ +
Sbjct: 184 ADETTRNDIVRLLNLNNPLIHISSFDRPNIRYTLIEKYKP----LDQLWLFIRGQ--KGK 237
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
SGIVYC SR E++++ L++RG+S YHA +D + R +V + ++ LQV+V TVAFG
Sbjct: 238 SGIVYCNSRSRVEEISERLQKRGLSVAPYHAGLDNSQRARVQDAFQRDDLQVVVATVAFG 297
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
MGINKP+VRFV+H ++ +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 298 MGINKPNVRFVVHFNIPRNIESYYQETGRAGRDGLPAEAVLFYDPADM 345
>gi|406997576|gb|EKE15607.1| hypothetical protein ACD_11C00117G0003 [uncultured bacterium]
Length = 719
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/347 (47%), Positives = 232/347 (66%), Gaps = 17/347 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q+EII VL+ RD V+M GGGKSLCYQLPA+ GI LV+SPL++L++D
Sbjct: 9 FGFDEFRPLQREIIENVLNKRDTFVLMPTGGGKSLCYQLPALKFPGITLVISPLIALMKD 68
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKS--KRFMSKL 204
QV L A G+ A L S+ S ++ + I K ++ EG++K+LY+ PE+++ + + F+ L
Sbjct: 69 QVDFLKASGVAAEFLNSSLSGDEIQRIQKEIK--EGKVKILYIAPERMASNGFENFLQNL 126
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ SLI++DEAHC S+WGHDFRPDY+NL LK FP VP+MALTATAT+KV+ D
Sbjct: 127 KP-------SLIAVDEAHCISEWGHDFRPDYRNLRRLKDIFPGVPIMALTATATEKVRQD 179
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+ F+S+ NR NLF+ V EK K +++ K ++ ES I+YCFS
Sbjct: 180 ILNQLNFENPNIFISSFNRDNLFFRVIEK----KNSFEKLLKLLENR--RKESVIIYCFS 233
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E +A LR G SA YHA +D R+K + ++K+ +IV T+AFGMGI+KPDV
Sbjct: 234 RKDTENLALNLRSEGFSALAYHAGLDSAKRKKTQEDFIQDKINIIVATIAFGMGIDKPDV 293
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
R V+H++ KS+E YYQE GRAGRDGLP+EC++F+ AD + +
Sbjct: 294 RMVVHYTFPKSLEGYYQEVGRAGRDGLPAECVMFYTFADARKHRYFI 340
>gi|441506545|ref|ZP_20988513.1| ATP-dependent DNA helicase RecQ [Photobacterium sp. AK15]
gi|441425751|gb|ELR63245.1| ATP-dependent DNA helicase RecQ [Photobacterium sp. AK15]
Length = 613
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 235/340 (69%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQE+I AV GRD LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 23 DVFGYQTFRTGQQEVIEAVAEGRDCLVIMPTGGGKSLCYQIPALMCDGLTLVVSPLISLM 82
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST S+E + Y+A++ +GE+K+ YV+PE++ ++ FM +L
Sbjct: 83 KDQVDQLKANGVAAACLNSTQSREAMQETYRAMQ--DGEVKLAYVSPERV-MTREFMERL 139
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
LSL+++DEAHC SQWGHDFRP+Y LG LK F +P++ALTATA + + D
Sbjct: 140 RDMP----LSLVAVDEAHCISQWGHDFRPEYAALGTLKQHFDQLPIIALTATADETTRQD 195
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + ++ + +RPN+ Y ++EK + +++ Y++ + GIVYC S
Sbjct: 196 ILSRLSLTDPHIYLGSFDRPNIRYTLQEKYKP----MSQLSSYLRGV--RGQCGIVYCNS 249
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK EQ+ ++L + GI A YHA ++ + R +V + ++ + ++V TVAFGMGINKP+V
Sbjct: 250 RKRVEQITEKLCESGIRAAAYHAGLEFDERARVQEDFQRDDIHIVVATVAFGMGINKPNV 309
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H+ + +++E+YYQE+GRAGRDGLP+E ++F+ P+D+
Sbjct: 310 RFVVHYDIPRNIESYYQETGRAGRDGLPAEAVMFYDPSDL 349
>gi|448239974|ref|YP_007404027.1| ATP-dependent DNA helicase [Serratia marcescens WW4]
gi|445210338|gb|AGE16008.1| ATP-dependent DNA helicase [Serratia marcescens WW4]
Length = 614
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 235/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA + G+D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 17 AEQVLRDTFGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A ST ++E++ + G +KMLY+ PE++
Sbjct: 77 PLISLMKDQVDQLLAYGVSAACYNSTQTREEQLDVMAGCRNGT--IKMLYIAPERLMMES 134
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+S L+ C A ++++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA
Sbjct: 135 -FLSLLDHCPPA----MLAVDEAHCISQWGHDFRPEYRALGQLKQRFPSMPVIALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L ++ + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 190 EATRGDIVRLLSLQDPLVQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA +D + R +V + ++ LQV+V TVAFGMG
Sbjct: 244 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 304 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADM 349
>gi|290477101|ref|YP_003470014.1| ATP-dependent DNA helicase [Xenorhabdus bovienii SS-2004]
gi|289176447|emb|CBJ83256.1| ATP-dependent DNA helicase [Xenorhabdus bovienii SS-2004]
Length = 608
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 235/348 (67%), Gaps = 13/348 (3%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A+ V FG +R QQ++I+AVL GRD LV+M GGGKSLCYQ+PA++ G+ LV
Sbjct: 11 SLAEQVLRKTFGYQQFRPGQQQVIDAVLDGRDCLVVMPTGGGKSLCYQIPALINNGLTLV 70
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
VSPL+SL++DQV L A G+ A L ST ++E + I + +G +K+LY+ PE++
Sbjct: 71 VSPLISLMKDQVDQLRANGVEAECLNSTQNREQQVDIIQRCR--QGSIKLLYIAPERLV- 127
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
+ F+ +L H L+++DEAHC SQWGHDFRP+Y+ LG + +FP++P +ALTAT
Sbjct: 128 TDNFLDQLHDWHPV----LLAVDEAHCISQWGHDFRPEYRALGQFRRRFPELPFIALTAT 183
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A + + D+ +L + + +S+ +RPN+ Y + EK +D++ +++ +
Sbjct: 184 ADKTTRQDITRLLELHDPLIHLSSFDRPNIRYTLVEKYKP----LDQLWSFVRGQ--QGK 237
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
SGI+YC SR + E+ A+ L++RG+S YHA +D N R V + ++ LQV+V TVAFG
Sbjct: 238 SGIIYCNSRTKVEETAERLQKRGLSVAPYHAGLDNNQRAWVQDAFQRDDLQVVVATVAFG 297
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
MGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LFF PAD+
Sbjct: 298 MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILFFDPADM 345
>gi|157157237|ref|YP_001465308.1| ATP-dependent DNA helicase RecQ [Escherichia coli E24377A]
gi|157079267|gb|ABV18975.1| ATP-dependent DNA helicase RecQ [Escherichia coli E24377A]
Length = 609
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +++ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKP----LDQLMRYVQEQC--G 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|218556387|ref|YP_002389301.1| ATP-dependent DNA helicase RecQ [Escherichia coli IAI1]
gi|218363156|emb|CAR00797.1| ATP-dependent DNA helicase [Escherichia coli IAI1]
Length = 609
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST + E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTCEQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|148827918|ref|YP_001292671.1| frataxin-like protein [Haemophilus influenzae PittGG]
gi|148719160|gb|ABR00288.1| frataxin-like protein [Haemophilus influenzae PittGG]
Length = 619
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 233/348 (66%), Gaps = 13/348 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLAQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD ++F
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILF 356
>gi|425461242|ref|ZP_18840722.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
gi|389825935|emb|CCI23927.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
Length = 701
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 235/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + ++ E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRDRESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y VR K+S ++ +YI+ SGIVYC
Sbjct: 188 EDIIQQLGLRDASIHIASFNRPNLYYEVRAKTSKS---YQQLYQYIK---GKKGSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK +QVA+ L++ GI+A YHA M+ R + R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFV+H+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|145628391|ref|ZP_01784192.1| organic solvent tolerance protein [Haemophilus influenzae 22.1-21]
gi|145638475|ref|ZP_01794085.1| organic solvent tolerance protein [Haemophilus influenzae PittII]
gi|260583174|ref|ZP_05850954.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae NT127]
gi|386266538|ref|YP_005830030.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae R2846]
gi|144980166|gb|EDJ89825.1| organic solvent tolerance protein [Haemophilus influenzae 22.1-21]
gi|145272804|gb|EDK12711.1| organic solvent tolerance protein [Haemophilus influenzae PittII]
gi|260093792|gb|EEW77700.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae NT127]
gi|309751607|gb|ADO81591.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae R2866]
gi|309973774|gb|ADO96975.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae R2846]
Length = 619
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 233/348 (66%), Gaps = 13/348 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLAQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD ++F
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILF 356
>gi|19114004|ref|NP_593092.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe 972h-]
gi|1175484|sp|Q09811.1|HUS2_SCHPO RecName: Full=ATP-dependent DNA helicase hus2/rqh1
gi|1019410|emb|CAA91177.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe]
gi|1684754|emb|CAA70577.1| DNA-helicase [Schizosaccharomyces pombe]
Length = 1328
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 225/357 (63%), Gaps = 10/357 (2%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR- 130
++ W + F + +R NQ E IN LSG+DV ++M GGGKSLCYQLPAV+
Sbjct: 500 SYPWSKEVLGCLKHKFHLKGFRKNQLEAINGTLSGKDVFILMPTGGGKSLCYQLPAVIEG 559
Query: 131 ---EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
G+ LV+SPLLSL+QDQ+ L L IP+ L+ ++ + + L +K+L
Sbjct: 560 GASRGVTLVISPLLSLMQDQLDHLRKLNIPSLPLSGEQPADERRQVISFLMAKNVLVKLL 619
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
YVTPE ++ + L+ + L+ I IDEAHC S WGHDFRPDYK LG+L+ ++
Sbjct: 620 YVTPEGLASNGAITRVLKSLYERKLLARIVIDEAHCVSHWGHDFRPDYKQLGLLRDRYQG 679
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
+P MALTATA + V+ D++ L + C++ S+ NRPNLFY ++ K K + E+ ++
Sbjct: 680 IPFMALTATANEIVKKDIINTLRMENCLELKSSFNRPNLFYEIKPK----KDLYTELYRF 735
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKL 366
I + + ESGI+YC SR CEQVA +LR G+ A +YHA ++ R+++ W
Sbjct: 736 ISNGHLH-ESGIIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSY 794
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
++IV T+AFGMG++K DVRFVIHHS KS+E YYQE+GRAGRDG P+ C++F+ D
Sbjct: 795 KIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKD 851
>gi|425444700|ref|ZP_18824746.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|425454418|ref|ZP_18834158.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
gi|389735511|emb|CCI01005.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|389804921|emb|CCI15689.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
Length = 703
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 235/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + +E E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRERESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y V+ K+S ++ +YI+ SGIVYC
Sbjct: 188 EDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKS---YQQLYQYIK---GQKGSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK ++VA++L++ GI A YHA MD R + R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDKVAEQLQKDGIDALPYHAGMDDRERSENQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFV+H+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|342905065|ref|ZP_08726857.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21621]
gi|341951895|gb|EGT78444.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21621]
Length = 619
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/339 (46%), Positives = 230/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ EG+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFEGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+ LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQ--LKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++S I+IDEAHC SQWGHDFRP+Y LG LK FP P+MALTATA + D
Sbjct: 136 -QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADYATRQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILTHLNLENPHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +GISA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGISAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347
>gi|398793349|ref|ZP_10553767.1| ATP-dependent DNA helicase RecQ [Pantoea sp. YR343]
gi|398210961|gb|EJM97590.1| ATP-dependent DNA helicase RecQ [Pantoea sp. YR343]
Length = 608
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 230/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V + FG +R QQ II LSGRD LV+M GGGKSLCYQ+PA++REG+ LVVS
Sbjct: 13 AQQVLQDTFGYQQFRPGQQNIIETALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E ++ ++ G+ LK+LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQTREQQQQVFADCRTGK--LKLLYIAPERLMMDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L H ++++DEAHC SQWGHDFRP+Y ++G L+ FPD+P+MALTATA
Sbjct: 131 -FLDSL----HQWNPVMLAVDEAHCISQWGHDFRPEYGSIGQLRQHFPDLPVMALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +ND+ +L + + +S+ +RPN+ Y + EK +++ +Y+Q+ +SG
Sbjct: 186 ETTRNDIAHLLQMDDPLIQISSFDRPNIRYTLVEKFKP----TEQLLRYVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA +D R V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGIDSAQRASVQEAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|443668675|ref|ZP_21134223.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
gi|159029588|emb|CAO90247.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330750|gb|ELS45444.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
Length = 701
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 235/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + ++ E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRDRESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y VR K+S ++ +YI+ SGIVYC
Sbjct: 188 EDIIQQLGLRDASIHIASFNRPNLYYEVRAKTSKS---YQQLYQYIK---GKKGSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK +QVA+ L++ GI+A YHA M+ R + R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFV+H+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|254583105|ref|XP_002499284.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
gi|238942858|emb|CAR31029.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
Length = 1294
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 232/377 (61%), Gaps = 10/377 (2%)
Query: 59 GGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGG 118
G V + W D FG+ ++R NQ + +N+ L+G+DV V+M GGG
Sbjct: 529 GDQDKAVVHQPQPRYAWSDEVDYRLHQSFGLRSFRPNQLQAVNSTLAGKDVFVLMPTGGG 588
Query: 119 KSLCYQLPAVLR----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY 174
KSLCYQLPA+++ G +V+SPL+SL+QDQV L I A M +S + + + +
Sbjct: 589 KSLCYQLPAIVKSGKTRGTTIVISPLISLMQDQVEHLLNNNIKASMFSSRGTADQRRQTF 648
Query: 175 KALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPD 234
G L ++Y++PE IS S++ ++K H+ G+L+ I +DEAHC S WGHDFRPD
Sbjct: 649 NLF--IHGLLDLIYISPEMISASEQCKRGIKKLHNDGKLARIVVDEAHCVSNWGHDFRPD 706
Query: 235 YKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKS 294
YK L K ++P VPMMALTATA+++V+ D++ L ++ + + NR NLFY V K+
Sbjct: 707 YKELKYFKREYPHVPMMALTATASEQVRLDVIHNLELKDPVFLKQSFNRKNLFYGVVRKT 766
Query: 295 SVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAR 354
K I EI + I + N ++GI+YC S+ CEQ A ++++ GI +YHA M+ + R
Sbjct: 767 ---KNTIAEICESINTRFAN-QTGIIYCHSKNSCEQTAAQIQRNGIRCAFYHAGMEPDER 822
Query: 355 EKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSE 414
V W + LQVI TVAFGMGI+K DVRFV H+++ +++E YYQE+GRAGRDG PS
Sbjct: 823 SDVQRAWQNDDLQVICATVAFGMGIDKADVRFVYHYTVPRTLEGYYQETGRAGRDGKPSF 882
Query: 415 CLLFFRPADVPRQSSMV 431
C+ ++ DV +M+
Sbjct: 883 CITYYTFRDVRSIQTMI 899
>gi|425470694|ref|ZP_18849554.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
gi|389883511|emb|CCI36062.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
Length = 701
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 236/342 (69%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + +E E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRERESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y V+ K+S ++ +YI+ SGIVYC
Sbjct: 188 EDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKS---YQQLYQYIK---GQKGSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK +QVA++L++ GI+A YHA M+ R + R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDQVAEQLQKDGINALPYHAGMEDRERSQNQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFV+H+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|367043916|ref|XP_003652338.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
gi|346999600|gb|AEO66002.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
Length = 1637
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/369 (46%), Positives = 224/369 (60%), Gaps = 17/369 (4%)
Query: 73 FEWDSRADDVRLNV---FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
+ W ++DVR + F + +R NQ E INA L+G+D V+M GGGKSLCYQLPA++
Sbjct: 687 YPW---SEDVRRALKDRFRMTGFRHNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAMV 743
Query: 130 R----EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--EKGEGE 183
GI LV+SPLLSL+ DQV L L I A + + E I E E
Sbjct: 744 NSGKTRGITLVISPLLSLMNDQVAHLKRLNILATSFNGSINSELRNHILSVFREENPEHF 803
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
+++LY TPE ++ S F +E + +L+ I IDEAHC S WGHDFRPDYK LG +
Sbjct: 804 IQLLYATPEMLTSSPAFRKGIETLYRKKKLARIVIDEAHCVSHWGHDFRPDYKALGQFRL 863
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
F VP+MALTATAT V D+ L + C F + NRPNL+Y V EK + I
Sbjct: 864 AFTGVPVMALTATATSNVIADIKHNLSMEGCEVFSQSFNRPNLYYEVIEKQTR---FIQG 920
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWS 362
+ + I + YP +SGIVY SRK E A L + GI A YYHA MD ++ +V +W
Sbjct: 921 MGEMITKKYPG-QSGIVYTLSRKSAEGTASTLATKHGIKARYYHAMMDPESKAEVQRKWQ 979
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
+ ++ V+V T+AFGMGI+KPDVRFVIH +L KS+E YYQE+GRAGRDG PS+C L+F
Sbjct: 980 EGEIHVVVATIAFGMGIDKPDVRFVIHQNLPKSLEGYYQETGRAGRDGQPSDCYLYFSYG 1039
Query: 423 DVPRQSSMV 431
DVP M+
Sbjct: 1040 DVPALRRMI 1048
>gi|417610582|ref|ZP_12261072.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_DG131-3]
gi|345353354|gb|EGW85588.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_DG131-3]
Length = 603
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 4 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 63
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 64 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 121
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 122 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 176
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +++ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 177 TADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKP----LDQLMRYVQEQC--G 230
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 231 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 290
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 291 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 339
>gi|420376469|ref|ZP_14876214.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1235-66]
gi|391303394|gb|EIQ61231.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1235-66]
Length = 609
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
D A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 DMGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P +ALTA
Sbjct: 128 LDN-FLENLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R +V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|145630467|ref|ZP_01786247.1| ATP-dependent DNA helicase [Haemophilus influenzae R3021]
gi|144983857|gb|EDJ91299.1| ATP-dependent DNA helicase [Haemophilus influenzae R3021]
Length = 619
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 230/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLAQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347
>gi|260770707|ref|ZP_05879637.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
gi|260614288|gb|EEX39477.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
Length = 611
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 235/355 (66%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQE+I + ++GRD LVIM GGGKSLCYQ+PA+ REG+ +V+SPL+SL+
Sbjct: 22 DVFGYQTFRDGQQEVIESAVAGRDALVIMPTGGGKSLCYQIPALAREGVTVVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST S+E IY + G+ LK+LYV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECVNSTQSREALMGIYNRMHSGQ--LKLLYVSPERVLTGE-FIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
H L++I++DEAHC SQWGHDFRP+Y LG LK QFP VP+MALTATA ++D
Sbjct: 139 ----HNLPLAMIAVDEAHCISQWGHDFRPEYAALGQLKQQFPQVPIMALTATADDATRSD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L++ ++ + +RPN+ Y + EK + ++ +Y+ GI+YC S
Sbjct: 195 ILSRLNLTDPHVYLGSFDRPNIRYTLMEKHKP----VSQVIRYLDTQ--KGHCGIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAVMLYDPADIAWLRRMLDEKSDGPQ 363
>gi|389740691|gb|EIM81881.1| ATP-dependent DNA helicase [Stereum hirsutum FP-91666 SS1]
Length = 732
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/407 (42%), Positives = 247/407 (60%), Gaps = 33/407 (8%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F+W + VF I ++R Q+ NA + GRD++ IM GGGKS+ YQLPA+ G
Sbjct: 8 FDWSPQLRLQLKKVFDISSFRLVQEPACNANIDGRDIVCIMPTGGGKSIVYQLPALFALG 67
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALE--------KGEG-- 182
LV+SPLLSLI+DQ+M L G+ A MLT +TSK+D+ +IYK L+ KG
Sbjct: 68 CTLVISPLLSLIKDQIMHLQEAGVEAVMLTGSTSKDDQSYIYKCLQFTADPNKVKGGSDP 127
Query: 183 ------ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236
E+K+ YVTPEK++KSK ++ +E RL I IDEAHC SQ GHDFRPDYK
Sbjct: 128 KGRKFKEIKLCYVTPEKVAKSKTLLAIIETLAERNRLPRIVIDEAHCVSQLGHDFRPDYK 187
Query: 237 NLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKF-----------VSTINRPN 285
L L+ FP+VP++AL+AT V D++++L + + F S + R N
Sbjct: 188 ALSKLRQLFPNVPILALSATCPPNVLKDVLKILRLNRVTDFKQANADGTVYLTSPLYRKN 247
Query: 286 LFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVA---QELRQRGISA 342
L Y V K K I++I +YI+E +P ++GI+YC ++K+ E VA QE + +
Sbjct: 248 LHYKVLPKPKSAKAFIEQIIQYIEEEHPG-KTGIIYCLTQKDAEDVAKGVQEGSKGKVKC 306
Query: 343 DYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQE 402
YHA + +E +H W K++V+ T+AFG+GI+K DVRFV+HH SKS+E YYQE
Sbjct: 307 GVYHASIPEPQKEGLHEAWRAGKVKVVAATIAFGLGIDKADVRFVLHH--SKSLENYYQE 364
Query: 403 SGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQ 449
SGRAGRDG +EC+LF+R D R + + E G++ ++ +V+++Q
Sbjct: 365 SGRAGRDGDDAECVLFYRAQDAFRLTGVYTNEIGGVEKIHGMVQFAQ 411
>gi|269137489|ref|YP_003294189.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda EIB202]
gi|387866249|ref|YP_005697718.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda FL6-60]
gi|267983149|gb|ACY82978.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda EIB202]
gi|304557562|gb|ADM40226.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda FL6-60]
Length = 609
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 231/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ I+ A ++GRD LV+M GGGKSLCYQ+PA++R+G+ +VVS
Sbjct: 13 AEGVLKDTFGYQQFRPGQQAIVEAAIAGRDCLVVMPTGGGKSLCYQIPALVRDGLTIVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E ++ +Y GE +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLQANGVNAACLNSTLNREQQQAVYAGCRSGE--IRLLYIAPERL---- 126
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
M L +L+++DEAHC SQWGHDFRP+Y LG +K +FP +P++ALTATA
Sbjct: 127 -MMDNLLDTLPQWNPTLLAVDEAHCISQWGHDFRPEYSALGQIKRRFPQMPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ +L +R + VS+ +RPN+ Y + EK +D++ ++Q +SG
Sbjct: 186 DATRQDILGLLDLRDPLVQVSSFDRPNIRYTLIEKFKP----LDQLWHFVQSQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA +D R +V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNGRRAEVQEAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E LLF+ PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLFYDPADM 345
>gi|417149341|ref|ZP_11989432.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1.2264]
gi|386161562|gb|EIH23365.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1.2264]
Length = 611
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L + +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNSLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|428310069|ref|YP_007121046.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
gi|428251681|gb|AFZ17640.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
Length = 757
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/377 (44%), Positives = 248/377 (65%), Gaps = 10/377 (2%)
Query: 48 FEASRGSPIQYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGR 107
+ASR G +++ +N S ++ S + ++ + FG A+R Q++I+ L+ R
Sbjct: 25 LDASRLYSSAVGTIIASSAQNQSIMYQLQSLEEALK-HFFGYDAFRPGQRQIVEEALAQR 83
Query: 108 DVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSK 167
D+LVIM GGGKSLC+QLPA+L+ G+ +VVSPL++L+QDQV L GI A L ST S
Sbjct: 84 DLLVIMPTGGGKSLCFQLPALLKPGLTVVVSPLIALMQDQVDALVDNGIGATFLNSTLSW 143
Query: 168 EDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQW 227
+D + + L G++K+LYV PE++ K F+ LEK +S +IDEAHC S+W
Sbjct: 144 DDVR--SRELAILNGKIKLLYVAPERLLGEK-FLPFLEKVRAQIGISAFAIDEAHCVSEW 200
Query: 228 GHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLF 287
GHDFRP+Y+ + L+ ++PD+P++ALTATAT++VQ D++E L +R+ +++ NRPNL+
Sbjct: 201 GHDFRPEYRQMKQLRQRYPDIPILALTATATKRVQQDILEQLTLRQPGIHIASFNRPNLY 260
Query: 288 YMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHA 347
Y V+ K + +++ K I+ + SGIVYC SR+ ++VA L++ GI A YHA
Sbjct: 261 YEVQPKE---RHSYNQLLKKIKS---HKGSGIVYCLSRRAVDEVAFRLQKDGIDALPYHA 314
Query: 348 DMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAG 407
M AR R+ ++ +QV+V T+AFGMGINKPDVRFVIH+ L ++E YYQESGRAG
Sbjct: 315 GMSDEARATNQTRFIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPHNLERYYQESGRAG 374
Query: 408 RDGLPSECLLFFRPADV 424
RDG P+ C LFF ++
Sbjct: 375 RDGEPAHCTLFFGAGNI 391
>gi|283834583|ref|ZP_06354324.1| ATP-dependent DNA helicase RecQ [Citrobacter youngae ATCC 29220]
gi|291069712|gb|EFE07821.1| ATP-dependent DNA helicase RecQ [Citrobacter youngae ATCC 29220]
Length = 609
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 235/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +VVS
Sbjct: 13 AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSGQ--VRLLYIAPERLMLD- 129
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P +ALTATA
Sbjct: 130 ---NFLEHLGHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SG
Sbjct: 186 ETTRLDIVRLLGLNEPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGISA YHA ++ + R +V ++ ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGISAGAYHAGLENSVRAEVQEKFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|429112524|ref|ZP_19174294.1| ATP-dependent DNA helicase RecQ [Cronobacter malonaticus 507]
gi|426313681|emb|CCK00407.1| ATP-dependent DNA helicase RecQ [Cronobacter malonaticus 507]
Length = 609
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 235/353 (66%), Gaps = 13/353 (3%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLRE 131
+ ++ A V FG +R Q II+AVL GRD LV+M GGGKSLCYQ+PA+++
Sbjct: 6 VYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKT 65
Query: 132 GIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTP 191
G+ +VVSPL+SL++DQV L A G+ A L ST S+++++ + G+ +++LY+ P
Sbjct: 66 GLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRTGQ--VRLLYIAP 123
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ F+ L L+++++DEAHC SQWGHDFRP+Y LG L+ +FP VP +
Sbjct: 124 ERLMMDN-FIDTLGYWD----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFV 178
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 179 ALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ 234
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V
Sbjct: 235 --RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVA 292
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|432716451|ref|ZP_19951464.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE9]
gi|431269860|gb|ELF61161.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE9]
Length = 611
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSG D LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGHDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|383815908|ref|ZP_09971314.1| ATP-dependent DNA helicase RecQ [Serratia sp. M24T3]
gi|383295198|gb|EIC83526.1| ATP-dependent DNA helicase RecQ [Serratia sp. M24T3]
Length = 610
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 237/346 (68%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA + G+D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQTIINAAILGKDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E ++ + G +KMLY+ PE+++
Sbjct: 73 PLISLMKDQVDQLMAAGVEAGCLNSTQTREQQQEVMAGCRSGR--IKMLYIAPERLTMGD 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L++ + A ++++DEAHC SQWGHDFRP+Y+ LG LK ++P +P++ALTATA
Sbjct: 131 -FLEQLQQWNPA----MLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ND++ +L + + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 DATRNDIVRLLELNDPLVQVSSFDRPNIRYTLVEKFKP----LDQLLRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGIS YHA ++ + R +V + ++ +Q++V TVAFGMG
Sbjct: 240 IIYCGSRAKVEDTAARLQSRGISVGAYHAGLENDRRSQVQEAFQRDDVQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E LL + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADM 345
>gi|224827278|ref|ZP_03700371.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania ferrooxidans
2002]
gi|224600491|gb|EEG06681.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania ferrooxidans
2002]
Length = 628
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 217/612 (35%), Positives = 326/612 (53%), Gaps = 66/612 (10%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
VFG PA+R Q EI+ V G + LV+M GGGKSLCYQ+PA+LREG+A+VVSPL++L+
Sbjct: 38 TVFGYPAFRGEQAEIVAHVGGGGNALVLMPTGGGKSLCYQIPALLREGVAIVVSPLIALM 97
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L+ LG+ A L S T+ ++ + I + + G L +LYV PE++ + RF+ L
Sbjct: 98 QDQVATLSELGVAAACLNSATAPDEARDIVR--QARAGTLDLLYVAPERL-LTPRFLELL 154
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
R++L +IDEAHC S WGHDFRP+Y+ LGIL +FP VP +ALTATA ++ + D
Sbjct: 155 NDL----RIALFAIDEAHCVSHWGHDFRPEYQQLGILAERFPAVPRIALTATADEQTRAD 210
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + + F+S+ +RPNLFY V EK + K ++ +IQ+ YP + SGIVYC S
Sbjct: 211 ILHYLRLAEARVFLSSFDRPNLFYQVVEKHNAKK----QLLAFIQQDYPGA-SGIVYCLS 265
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK E AQ L + GI A YHA + R++ + + V+V TVAFGMGI+KPDV
Sbjct: 266 RKRVEDTAQWLVENGIRALPYHAGLGHEVRDRHQREFLREDGVVMVATVAFGMGIDKPDV 325
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDI 444
RFV H L KS E +YQESGRAGRDGLP+ L + D+ + + M+ E S + L
Sbjct: 326 RFVAHIDLPKSPENFYQESGRAGRDGLPAASWLCYGLNDMVQLTQMI--EGSEMAVLQKQ 383
Query: 445 VRYSQYPLHWNIEKV----RLVIFEKLQQVNLFCMVVLAGHAQCIIS------------- 487
V S+ + R I + + C GH ++
Sbjct: 384 VELSKLDAMLAFCETAACRRQHILAHFSEQSAPC-----GHCDNCLNPPVTFDATLPVQK 438
Query: 488 LLQDIQDNNQRLTMLQLVDKM--------------KIKLKEIDSDLKREEIEQLVLQLII 533
LL I QR ++D + ++ I +L + ++ QL+
Sbjct: 439 LLSCIYRVEQRFAASHVIDVLLGRANQSVTAFGHDQLSTFGIGRELNQRGWRSIIRQLVA 498
Query: 534 DRVL-VRIGP-----FSPG-KKIIKLEISSVQKNTADNKKS----TKRSLTSSALEFELD 582
++L V I F G + I+K E + AD+KKS T R L + E
Sbjct: 499 KKLLQVDIARGQSLVFGDGCRAILKGEQKVYLRPLADDKKSRSANTDRWLRTEREERLWQ 558
Query: 583 ELRKELASISG--GILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKYGSR 640
LR+ S++ + ++V S + +R + ++P++ E + +G+LK +YG
Sbjct: 559 MLRRWRKSMADEHNVPAYAVFSDKTLRELVEKRPASRVEIGRVY---GLGELKLARYGDA 615
Query: 641 ILEVISKCGNSE 652
+L ++++ S+
Sbjct: 616 LLAILNEASQSD 627
>gi|432374232|ref|ZP_19617263.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE11]
gi|430893654|gb|ELC15978.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE11]
Length = 611
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPMLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|366158888|ref|ZP_09458750.1| ATP-dependent DNA helicase RecQ [Escherichia sp. TW09308]
Length = 609
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPMLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|417542867|ref|ZP_12194198.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|353657835|gb|EHC98179.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
Length = 609
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ VLSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|304398161|ref|ZP_07380036.1| ATP-dependent DNA helicase RecQ [Pantoea sp. aB]
gi|440760554|ref|ZP_20939663.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans 299R]
gi|304354447|gb|EFM18819.1| ATP-dependent DNA helicase RecQ [Pantoea sp. aB]
gi|436425719|gb|ELP23447.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans 299R]
Length = 609
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 234/355 (65%), Gaps = 13/355 (3%)
Query: 70 SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
S ++ A V + FG +R QQ II+ LSGRD LV+M GGGKSLCYQ+PA++
Sbjct: 4 SAVLNQEALAQQVLQDTFGYQHFRPGQQTIIHQALSGRDCLVVMPTGGGKSLCYQIPALV 63
Query: 130 REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYV 189
REG+ LVVSPL+SL++DQV L A G+ A L ST +++ ++ + G +K+LY+
Sbjct: 64 REGLTLVVSPLISLMKDQVDQLLANGVAAAYLNSTMTRDQQQTVMADCRTGR--VKLLYI 121
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
PE++ F+ L A ++++DEAHC SQWGHDFRP+Y LG ++ +FP++P
Sbjct: 122 APERLMMDN-FLESLAHWQPA----MLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELP 176
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATA + +ND++ +LH++ + +S+ +RPN+ Y + EK D++ +Y+Q
Sbjct: 177 VMALTATADETTRNDIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKP----TDQLLRYVQ 232
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVI 369
+ + GI+YC SR + E A L+ RG S YHA +D R +V + ++ LQ++
Sbjct: 233 DQ--RGKCGIIYCNSRAKVEDTAARLQSRGFSVGAYHAGIDSEQRGRVQEAFQRDDLQIV 290
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 291 VATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|356533550|ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
1-like [Glycine max]
Length = 612
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 231/372 (62%), Gaps = 19/372 (5%)
Query: 70 SGTFEWDSRADDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLP 126
S T+E DD+ L +FG +R Q + A L+ +D ++M GGGKSLCYQLP
Sbjct: 186 SPTYEELQALDDIELANVVIFGNRTFRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLP 245
Query: 127 AVLREGIALVVSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELK 185
A L+ G+ +VVSPLLSLIQDQ++ L GIP+ L S + + + L K + K
Sbjct: 246 ATLQPGVTVVVSPLLSLIQDQIITLNLKFGIPSTFLNSQQTASQVTAVLQELRKDKPSCK 305
Query: 186 MLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245
+LYVTPE+I+ ++ F+ L+ H G+L+ +DEAHC SQWGHDFRPDY+ LG LK F
Sbjct: 306 LLYVTPERIAGNQSFLEILKFMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSLKLHF 365
Query: 246 PDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSS-----VGKVV 300
PDVP+MALTATAT V+ D+++ L I + + +RPNL Y V K+ +G+++
Sbjct: 366 PDVPVMALTATATHAVREDILKALRIPHALVLERSFDRPNLKYEVIAKTKEPLKQLGQLL 425
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHM 359
ID ++ GIVYC S+ EC +V++ L ++ I YYHA + R V
Sbjct: 426 IDRF---------RNQCGIVYCLSKSECVEVSKFLNEKCKIKTVYYHAGLAARQRVAVQK 476
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+W ++ ++ T+AFGMGI+KPDVRFVIH+++SKS+E+YYQESGRAGRD PS C+ +
Sbjct: 477 KWYDGEVHIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNFPSVCIALY 536
Query: 420 RPADVPRQSSMV 431
+ D R M+
Sbjct: 537 QKKDFSRVVCMI 548
>gi|308452165|ref|XP_003088938.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
gi|308244257|gb|EFO88209.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
Length = 1020
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/372 (47%), Positives = 229/372 (61%), Gaps = 13/372 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q++ I + L G D V+M G GKSLCYQLPAV+ G+ +VVSPL SLI+D
Sbjct: 277 FGFNQFRHRQKQCILSTLMGNDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 336
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q M + LGI LT+ S ++ IY L +K+LYVTPEKIS S R +S
Sbjct: 337 QKMKMKELGIGCEALTADLSAGAQEDIYSDLTSENPTIKLLYVTPEKISASGRLISVFYT 396
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF--PDVPMMALTATATQKVQND 264
H G L+ IDEAHC SQWGHDFRPDY L L+ +F P VP++ALTATAT K+ D
Sbjct: 397 LHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLSTLREKFHNPPVPIIALTATATPKIVTD 456
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
L ++ F+S+ R NL Y + K++ K +I+ + K +++ YP +SGIVYC S
Sbjct: 457 ARYNLKMQNSKLFISSFVRDNLKYDLIPKAA--KSLINVVEK-MKQLYP-GKSGIVYCLS 512
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RKECE V L + G+SA+ YHA ++ R V W NK VI T+AFGMGI+KPDV
Sbjct: 513 RKECETVQMMLTKAGLSAEVYHAGLNDGLRVSVQKGWLANKFDVICATIAFGMGIDKPDV 572
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG------- 437
RFVIH+SL KS+E YYQE+GRAGRDG+PS CL+ + D R M+ N+
Sbjct: 573 RFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNTTTGVRSMH 632
Query: 438 LQNLYDIVRYSQ 449
L N+ +V Y +
Sbjct: 633 LNNVLQVVAYCE 644
>gi|293413264|ref|ZP_06655926.1| ATP-dependent DNA helicase RecQ [Escherichia coli B354]
gi|291468212|gb|EFF10709.1| ATP-dependent DNA helicase RecQ [Escherichia coli B354]
Length = 609
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L + +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNSLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|90414260|ref|ZP_01222240.1| putative ATP-dependent DNA helicase RecQ [Photobacterium profundum
3TCK]
gi|90324707|gb|EAS41248.1| putative ATP-dependent DNA helicase RecQ [Photobacterium profundum
3TCK]
Length = 615
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 235/340 (69%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQE+I AV+ G+D LVIM GGGKSLCYQ+PA++ GI LV+SPL+SL+
Sbjct: 23 DVFGYQSFRIGQQEVIEAVIEGQDCLVIMPTGGGKSLCYQIPALIMPGITLVISPLISLM 82
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST S+E+ + A+ EG+LK++YV+PE++ + F+ +L
Sbjct: 83 KDQVDQLNANGVAAAYINSTMSREEVMETFLAMR--EGDLKLVYVSPERVLM-RDFIERL 139
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ LS++++DEAHC SQWGHDFRP+Y LG LK F ++P+MALTATA +ND
Sbjct: 140 ----YETPLSMVAVDEAHCVSQWGHDFRPEYAALGTLKQHFENLPIMALTATADDTTRND 195
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ L + ++ + +RPN+ Y + EK + ++ +Y+ + + GIVYC S
Sbjct: 196 ITSRLGLTNPHAYLGSFDRPNIRYTLLEKHKP----MTQLTRYL--TGVRGQCGIVYCNS 249
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK EQ+A++LR G+ A YHA +D + R +V + ++ + ++V TVAFGMGINKP+V
Sbjct: 250 RKRVEQIAEKLRDSGVRAAAYHAGLDHDERGRVQESFQRDDIHIVVATVAFGMGINKPNV 309
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H+ + +++E+YYQE+GRAGRDGLP+E ++F+ P+D+
Sbjct: 310 RFVVHYDIPRNIESYYQETGRAGRDGLPAEAVMFYDPSDL 349
>gi|328864030|gb|EGG13129.1| hypothetical protein MELLADRAFT_46354 [Melampsora larici-populina
98AG31]
Length = 498
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/355 (46%), Positives = 221/355 (62%), Gaps = 10/355 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
W +F + A+R NQ + INA LSG V+M GGGKSLCYQLPAV+R
Sbjct: 5 WSKDVAKALTKIFKLKAWRRNQLDAINATLSGEHCFVLMPTGGGKSLCYQLPAVVRSGKT 64
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVT 190
G+ +VVSPLLSLI DQ+ L I A T T SK+++ + L + L +LYVT
Sbjct: 65 HGVTIVVSPLLSLITDQIQSLCEKEIGAAPWTGTMSKQEKAAVTSDLRSKDPSLCLLYVT 124
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI-LKTQFPDVP 249
PE + +S L+ ++ IDEAHC SQWGHDFRPDY LG L F +P
Sbjct: 125 PESMMQSGELKGILKDLQKRSLIARFVIDEAHCLSQWGHDFRPDYILLGKHLALDFSGIP 184
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
++ALTATA VQ D+++ L I C+K + NRPNL Y VR K+ K ++++ + I
Sbjct: 185 ILALTATANGVVQQDIIKNLQIGSCVKLTQSFNRPNLRYEVRNKT---KEAMNDLIRIIT 241
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHMRWSKNKLQV 368
+ + GIVYCFS+++CEQVA +L RG + A +YHA M N R+++ W + LQV
Sbjct: 242 VDHAG-KCGIVYCFSKRDCEQVASDLVSRGNVRAHHYHAGMSTNDRQRIQQDWQRGVLQV 300
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
+ T+AFGMGI+KPDVRFV+H+SL S+E YYQE+GRAGRDG PSEC+LF+ D
Sbjct: 301 LCATIAFGMGIDKPDVRFVVHYSLPSSLEGYYQETGRAGRDGGPSECILFYTYRD 355
>gi|432555903|ref|ZP_19792618.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE47]
gi|431080717|gb|ELD87511.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE47]
Length = 611
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LDN-FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VR V+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRVVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|50307299|ref|XP_453628.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642762|emb|CAH00724.1| KLLA0D12694p [Kluyveromyces lactis]
Length = 1367
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 247/406 (60%), Gaps = 28/406 (6%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
+ W S +VFG+ ++R NQ E +NA L G+D V+M GGGKSLCYQLPA+++ G
Sbjct: 577 YAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSG 636
Query: 133 ----IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
+VVSPL+SL+QDQV L A I A M +S + E + + G L+++Y
Sbjct: 637 RTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNGL--LELVY 694
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
++PE I S + + K + G+L+ I +DEAHC S WGHDFRPDYK L K ++PD+
Sbjct: 695 ISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDI 754
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
PM+ALTATA+++V+ D++ L + + + NR NLFY V +K K I ++ I
Sbjct: 755 PMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKE---KNSIFQMCDMI 811
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ + N ++GI+YC S+ CEQ + +++ G+ +YHA MD + R +V W +++QV
Sbjct: 812 RTKFKN-QTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQV 870
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
I TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S+C++++ DV
Sbjct: 871 ICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQ 930
Query: 429 SMVFYENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFC 474
+M+ + +NL D++ ++ +KLQQV +C
Sbjct: 931 TMIQKD----KNL-DMINKEKH-------------LDKLQQVMQYC 958
>gi|259906892|ref|YP_002647248.1| ATP-dependent DNA helicase RecQ [Erwinia pyrifoliae Ep1/96]
gi|387869602|ref|YP_005800972.1| ATP-dependent DNA helicase RecQ [Erwinia pyrifoliae DSM 12163]
gi|224962514|emb|CAX53969.1| ATP-dependent DNA helicase [Erwinia pyrifoliae Ep1/96]
gi|283476685|emb|CAY72514.1| ATP-dependent DNA helicase RecQ [Erwinia pyrifoliae DSM 12163]
Length = 610
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 230/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V + FG +R QQ II L+GRD LV+M GGGKSLCYQ+PA++R+G+ LVVS
Sbjct: 13 AGQVLRDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E+++ + G +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSGT--VRLLYIAPERLMMDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L C+ A ++++DEAHC SQWGHDFRP+Y LG L+ + PDVP+MALTATA
Sbjct: 131 -FLEQLTHCNPA----MLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +ND+ +L + + +S+ +RPN+ Y + EK +++ +Y+Q+ + G
Sbjct: 186 ETTRNDIARLLQLNDPLIQISSFDRPNIRYTLVEKFKP----TEQLLRYVQDQ--RGKCG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA MD R V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNAHRAHVQEAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E LL + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADM 345
>gi|453064584|gb|EMF05549.1| ATP-dependent DNA helicase RecQ [Serratia marcescens VGH107]
Length = 610
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 235/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA + G+D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A ST ++E++ + G +KMLY+ PE++
Sbjct: 73 PLISLMKDQVDQLLAYGVSAACYNSTQTREEQLDVMAGCRNGT--IKMLYIAPERLMMES 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F++ L+ C A ++++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA
Sbjct: 131 -FLNLLDHCPPA----MLAVDEAHCISQWGHDFRPEYRALGQLKQRFPSMPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L ++ + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 EATRGDIVRLLSLQDPLVQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA +D + R +V + ++ LQV+V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADM 345
>gi|397614043|gb|EJK62561.1| hypothetical protein THAOC_16821 [Thalassiosira oceanica]
Length = 1292
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 194/534 (36%), Positives = 289/534 (54%), Gaps = 88/534 (16%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
+FG +R QQE+I + GRDV V++ GGGKSLCYQLPA + G+++V+SPLL+L++
Sbjct: 464 MFGHDRFRPGQQEVIENAMRGRDVFVLLPTGGGKSLCYQLPAWCQPGLSVVISPLLALME 523
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEK-FIYKALEK--GEGELKMLYVTPEKISKSKRFMS 202
DQV + G+ + L ST S EDE+ FI + L + G +K+LYVTPEK++ S
Sbjct: 524 DQVQSMVRAGVESVFLNSTQSYEDEQQFIVQKLNQLTPHGGIKLLYVTPEKLTHSGMIRG 583
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
++ +S +DEAHC S WGHDFRPDYKNL L+ +P VP+MALTATA ++V
Sbjct: 584 IIQSLSQRNLVSRFVVDEAHCLSDWGHDFRPDYKNLRNLRHDYPTVPIMALTATANEQVV 643
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D M++L +R F S+ NRPNL Y VR+K + ID I +YI E ESG++YC
Sbjct: 644 KDSMQVLGMRNAFVFRSSFNRPNLHYEVRKKDT---KTIDTICEYIAER--RGESGVIYC 698
Query: 323 FSRKECEQVAQELRQ-------RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
S+K+CE V+Q+L R I +YHAD+D + + H WS ++ V+ T+AF
Sbjct: 699 LSKKDCENVSQKLNNKLREKGIRNIRVSFYHADVDPAEKARRHNEWSSGRIAVLCATIAF 758
Query: 376 GMG---------------------------INKPDVRFVIHHSLSKSVETYYQESGRAGR 408
GMG ++KPDVRFV+H+S+ KS+ YYQESGRAGR
Sbjct: 759 GMGSKSSALLFCAFSATCPSDPLLSLFRHSVDKPDVRFVMHYSMPKSITHYYQESGRAGR 818
Query: 409 DGLPSECLLFF------------RPADVPRQSSMVFYENSGLQNLYDIVRYSQYPLHWNI 456
DG ++C+LF+ + AD R S+ + ++ LY VRY +
Sbjct: 819 DGNNADCILFYSYKDKKTLEFMIKKADNVRNSAACRRK---IEQLYTCVRYCENTFECR- 874
Query: 457 EKVRLVIF-EKLQQ--VNLFCMVVLA----------GHAQCIISLLQDI--QDNNQRLTM 501
++L F E + N C A A+ +I+LL + Q N + +T+
Sbjct: 875 RTLQLRFFGENFDKCVCNRTCDNCRADRVPERRNMTSEAREVIALLDSLSHQRNGRGVTL 934
Query: 502 LQLVD-----KMKIKLKEIDSD----------LKREEIEQLVLQLIIDRVLVRI 540
+QLV+ K K K +++ +R++++++ ++ D +L I
Sbjct: 935 VQLVELWRGSKSKQHTKFLNTSTLVNYGAGTKYRRDDVDRIAHSMVFDGILNEI 988
>gi|423684806|ref|ZP_17659614.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri SR5]
gi|371495853|gb|EHN71447.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri SR5]
Length = 608
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 240/357 (67%), Gaps = 13/357 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R Q+E+INAVL G+D LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL+
Sbjct: 19 DVFGYQEFRVGQEEVINAVLDGKDCLVIMPTGGGKSLCYQIPALVFEGLTLVISPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST +E++ I+ + G++KMLYV+PE++ + FM +L
Sbjct: 79 KDQVDQLKANGVKAECLNSTIEREEQIAIWNRV--NSGQVKMLYVSPERVM-MRDFMDRL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E + L +I++DEAHC SQWGHDFRP+Y +LG +K +FP VP+MALTATA + + D
Sbjct: 136 ESLN----LCMIAVDEAHCISQWGHDFRPEYASLGQIKQRFPSVPIMALTATADEATRKD 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + + +++ + +RPN+ Y V EK + +I +Y+ ++ G++YC S
Sbjct: 192 ILHRLSLPEPHQYLGSFDRPNIRYTVLEKHKP----VSQIVRYLATQ--KNQCGVIYCGS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E + ++L I A YHA +D++ R V + ++ +Q++V TVAFGMGINK +V
Sbjct: 246 RKKVEMLTEKLCNNHIRAASYHAGLDLDERNYVQEAFQRDDIQIVVATVAFGMGINKSNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNL 441
RFV H + K++E+YYQE+GRAGRDGLP+E ++ + PAD+ +V + G Q L
Sbjct: 306 RFVAHFDIPKNIESYYQETGRAGRDGLPAEAVMLYDPADIVWLRKLVEEKPEGPQKL 362
>gi|343497191|ref|ZP_08735268.1| ATP-dependent DNA helicase RecQ [Vibrio nigripulchritudo ATCC
27043]
gi|342819758|gb|EGU54595.1| ATP-dependent DNA helicase RecQ [Vibrio nigripulchritudo ATCC
27043]
Length = 612
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 238/354 (67%), Gaps = 13/354 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG ++R Q+E+I + L G+D LVIM GGGKSLCYQ+PA+++EG+ LVVSPL+SL++
Sbjct: 24 VFGYQSFRVGQEEVIQSSLEGKDSLVIMPTGGGKSLCYQIPALVKEGVTLVVSPLISLMK 83
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST +++ +Y + G+ LK++YV+PE++ ++ FM +LE
Sbjct: 84 DQVDQLKANGVAAECINSTMERDELIKVYNRMNAGQ--LKLVYVSPERVL-TRDFMERLE 140
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
RLS+I++DEAHC SQWGHDFR +Y LG LK +FP P+MALTATA + + D+
Sbjct: 141 HL----RLSMIAVDEAHCISQWGHDFRREYAALGELKQRFPYAPIMALTATADEATRKDI 196
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ LH+ + ++++ + +RPN+ Y + EK VI +A + G++YC SR
Sbjct: 197 VSRLHLEEPLEYLGSFDRPNIRYNLVEKHKPVSQVIRFLATQ------QGQCGVIYCGSR 250
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + K+ +QV+V TVAFGMGINKP+VR
Sbjct: 251 KKVEMLTEKLCNNHIRAAGYHAGMDADERAYVQDAFQKDDIQVVVATVAFGMGINKPNVR 310
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ Q M+ ++ G Q
Sbjct: 311 FVLHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWQRRMLDEKDDGPQ 364
>gi|334121014|ref|ZP_08495090.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
gi|333455733|gb|EGK84376.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
Length = 731
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 160/340 (47%), Positives = 233/340 (68%), Gaps = 9/340 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG ++R QQEI+ A L RD++++M GGGKSLC+QLPA+L+ G+ +VVSPL++L+
Sbjct: 21 HFFGYDSFRPGQQEIVEAALQKRDMMIVMPTGGGKSLCFQLPALLKPGLTVVVSPLIALM 80
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L GI A L ST S ++ + A+ EG++K+LYV PE++ +RF+ L
Sbjct: 81 QDQVEALQDNGIGATFLNSTLSSQETRSRETAIL--EGKIKLLYVAPERLL-GERFLPFL 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ + +S +IDEAHC S+WGHDFRP+Y+ + ++ ++PD+P+M LTATAT++V+ D
Sbjct: 138 DIVANKLGISAFAIDEAHCVSEWGHDFRPEYRQMQRVRDRYPDIPIMGLTATATERVRQD 197
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L +R V++ NRPNL+Y VR K+ K E+ + I++ SGI+YC S
Sbjct: 198 IIQQLTLRNPYIHVASFNRPNLYYEVRPKT---KHSFAEVLQIIKKK---GGSGIIYCLS 251
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ ++VA +L+Q GI A YHA M+ R R+ ++ +QV+V T+AFGMGINKPDV
Sbjct: 252 RKKVDEVAYKLQQSGIQALPYHAGMNDVDRATNQTRFIRDDVQVMVATIAFGMGINKPDV 311
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFVIH+ L K++E YYQESGRAGRD P+ C LFF DV
Sbjct: 312 RFVIHYDLPKNLEGYYQESGRAGRDNEPAHCSLFFGYGDV 351
>gi|390440423|ref|ZP_10228752.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
gi|389836165|emb|CCI32878.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
Length = 703
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 234/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + +E E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRERESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R ++ NRPNL+Y V+ K+S ++ +YI+ SGIVYC
Sbjct: 188 EDIIQQLGLRDTSIHTASFNRPNLYYEVQPKTSKS---YQQLYQYIK---GQKGSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK ++VA++L++ GI A YHA MD R + R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDKVAEQLQKDGIDALPYHAGMDDRERSENQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFV+H+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|197265653|ref|ZP_03165727.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197243908|gb|EDY26528.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
Length = 615
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ VLSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|148826626|ref|YP_001291379.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
gi|148716786|gb|ABQ98996.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
Length = 615
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 230/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++ + LR +G+SA YHA M+ R++V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERITESLRNKGVSAAAYHAGMETARRDRVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347
>gi|197287158|ref|YP_002153030.1| ATP-dependent DNA helicase RecQ [Proteus mirabilis HI4320]
gi|227357149|ref|ZP_03841518.1| ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906]
gi|425070259|ref|ZP_18473373.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW6]
gi|425074080|ref|ZP_18477185.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW4]
gi|194684645|emb|CAR46565.1| ATP-dependent DNA helicase [Proteus mirabilis HI4320]
gi|227162681|gb|EEI47648.1| ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906]
gi|404594320|gb|EKA94907.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW4]
gi|404595525|gb|EKA96065.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW6]
Length = 609
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 234/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R QQEII+ +++GRD LV+M GGGKSLCYQ+PA+L +G+ +VVSPL+SL++
Sbjct: 20 TFGYQQFRPGQQEIIDTIITGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMK 79
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L GI A L ST S++++ + ++GE +K+LY+ PE++ F+ L
Sbjct: 80 DQVDQLCLHGIDAAFLNSTQSRDEQLQVQMRCQRGE--IKLLYIAPERLMMES-FLHHLV 136
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ A L+++DEAHC SQWGHDFRP+Y+ +G+L+ PDVP++ALTATA ++D+
Sbjct: 137 QWQPA----LLAVDEAHCISQWGHDFRPEYRGIGLLRQYLPDVPIIALTATADNTTRHDI 192
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L +R + +S+ +RPN+ Y + EK +D++ +I+ +SGI+YC SR
Sbjct: 193 INQLALRTPLVHISSFDRPNIRYTLVEKYKP----LDQLWLFIRGQ--KGKSGIIYCNSR 246
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ E+ A+ L +RG+S YHA MDI R KV + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 247 SKVEETAERLGKRGLSIAAYHAGMDIATRAKVQDAFQRDDLQIVVATVAFGMGINKPNVR 306
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP++ +LF+ PAD+
Sbjct: 307 FVVHFDIPRNIESYYQETGRAGRDGLPAQAVLFYDPADM 345
>gi|146165477|ref|XP_001015163.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila]
gi|146145471|gb|EAR94918.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila SB210]
Length = 1198
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 235/359 (65%), Gaps = 8/359 (2%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIA 134
WD + +D+ NV+G +R NQ+ IIN VL +DV +M GGGKSL +Q+P ++++G+
Sbjct: 390 WDQKVNDILANVYGYKNFRNNQRAIINCVLENKDVFAMMPTGGGKSLTFQIPGLVQDGVY 449
Query: 135 LVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKI 194
+V+ PL+SLI DQ + L IP + K ++ + L + + K++ +TPEKI
Sbjct: 450 IVIMPLISLISDQYNHMLRLNIPV-IRVQGARKNYQRELDSILYSDKNQSKIVLITPEKI 508
Query: 195 SKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALT 254
S + F L + + +L IDEAHC SQWGH+FR DY +LG LK ++P++P +ALT
Sbjct: 509 SSDEDFNQFLSQIYEKNKLRRFVIDEAHCVSQWGHEFRKDYLSLGQLKIKYPNIPTLALT 568
Query: 255 ATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPN 314
ATAT+K + D++++L+++ + F S+ NR NL+Y V KV I+ + +I+E + N
Sbjct: 569 ATATEKCKIDIIQLLNMKGTLYFQSSFNRTNLYYDVVRIPQ--KVTIEHMVNFIKEKF-N 625
Query: 315 SESGIVYCFSRKECEQVAQELR-QRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTV 373
+SGI+YC ++K+ E++A +L Q I+A YYH M+ +E+V W N +QVI T+
Sbjct: 626 KQSGIIYCCTKKDSEELASKLNIQYKINAAYYHGSMNDKEKEQVQQLWMSNDIQVICATI 685
Query: 374 AFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
AFGMGI+K DVRFVIH++ SKS+E YYQE+GRAGRDG S C +++ P D ++S+VF
Sbjct: 686 AFGMGIDKHDVRFVIHYTFSKSIENYYQEAGRAGRDGKISHCRIYYSPKD---KNSLVF 741
>gi|421847362|ref|ZP_16280501.1| ATP-dependent DNA helicase RecQ [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411771312|gb|EKS55013.1| ATP-dependent DNA helicase RecQ [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 609
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 233/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +VVS
Sbjct: 13 AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLMLD- 129
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P +ALTATA
Sbjct: 130 ---NFLEHLAHWNPM-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SG
Sbjct: 186 ETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGISA YHA ++ R +V ++ ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|419839751|ref|ZP_14363154.1| ATP-dependent DNA helicase RecQ [Haemophilus haemolyticus HK386]
gi|386909096|gb|EIJ73776.1| ATP-dependent DNA helicase RecQ [Haemophilus haemolyticus HK386]
Length = 619
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 230/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+ LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQRVQNKLISGQ--LKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++S I+IDEAHC SQWGHDFRP+Y LG LK FP P+MALTATA + D
Sbjct: 136 -QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADYATRQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L++ +++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILTHLNLENPHRYIGSFDRPNIRYTLEEKYKP----MEQLIRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAFRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347
>gi|385786868|ref|YP_005817977.1| ATP-dependent DNA helicase RecQ [Erwinia sp. Ejp617]
gi|310766140|gb|ADP11090.1| ATP-dependent DNA helicase RecQ [Erwinia sp. Ejp617]
Length = 610
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 230/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V + FG +R QQ II L+GRD LV+M GGGKSLCYQ+PA++R+G+ LVVS
Sbjct: 13 AGQVLRDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E+++ + G +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSGT--VRLLYIAPERLMMDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L C+ A ++++DEAHC SQWGHDFRP+Y LG L+ + PDVP+MALTATA
Sbjct: 131 -FLEQLTHCNPA----MLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +ND+ +L + + +S+ +RPN+ Y + EK +++ +Y+Q+ + G
Sbjct: 186 ETTRNDIARLLRLNDPLIQISSFDRPNIRYTLVEKFKP----TEQLLRYVQDQ--RGKCG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA MD R V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNAHRAHVQEAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E LL + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADM 345
>gi|251793708|ref|YP_003008438.1| ATP-dependent DNA helicase RecQ [Aggregatibacter aphrophilus
NJ8700]
gi|247535105|gb|ACS98351.1| ATP-dependent DNA helicase RecQ [Aggregatibacter aphrophilus
NJ8700]
Length = 631
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 168/348 (48%), Positives = 235/348 (67%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A DV +VFG ++R QQEII+A LSG+D LVIMA G GKSLCYQ+PA+ +G+ LV
Sbjct: 30 STALDVLHSVFGYQSFRKGQQEIIHAALSGQDCLVIMATGTGKSLCYQIPALCFDGMTLV 89
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VSPL+SL++DQV L GI A L ST T +E ++ +A+ G+LK+LY++PEK+
Sbjct: 90 VSPLISLMKDQVDQLRTNGIEADYLNSTQTFEEQQQVQNRAIS---GQLKLLYLSPEKV- 145
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F + C+ +S I+IDEAHC SQWGHDFRP+Y LG LK FP VP+MALTA
Sbjct: 146 MTNSFFQFISHCN----VSFIAIDEAHCISQWGHDFRPEYTQLGGLKGCFPKVPIMALTA 201
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA Q Q D+++ L + + V + +RPN+ Y + EK ++++ +++
Sbjct: 202 TADQTTQQDILQNLRLNRPHFHVGSFDRPNIRYTLVEKFKP----MEQLCRFVLAQ--KG 255
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SR + E++A+ L +G+ A YHA M+ REKV + ++ +QV+V T+AF
Sbjct: 256 KSGIVYCNSRNKVERIAETLCNKGVRAAAYHAGMENTLREKVQRDFQRDNIQVVVATIAF 315
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 316 GMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 363
>gi|417843805|ref|ZP_12489870.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21127]
gi|341948268|gb|EGT74898.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21127]
Length = 619
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 230/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFAGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIDADFLNSSQTLEQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++S I+IDEAHC SQWGHDFRP+Y LG LK FP P+MALTATA + D
Sbjct: 136 -QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADYATRQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILTHLNLENPHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H LS+S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 RFVAHFDLSRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347
>gi|444313787|ref|XP_004177551.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
gi|387510590|emb|CCH58032.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
Length = 1416
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 264/449 (58%), Gaps = 32/449 (7%)
Query: 2 ETEEILQELENVEAEVRLVQEQIKQLVDRQDQLYER-QSELKSLLEA---------FEAS 51
ET LQE+ N++ E+ ++ E K+LV+ D + + E+ + L +
Sbjct: 636 ETRTQLQEIHNIDDELSIISE--KKLVEDSDSFHPAIKMEIVNKLNPDSQINFDDSDDDF 693
Query: 52 RGSPIQYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLV 111
S I+ A + S + W S + F + +R +Q E INA LSGRDV V
Sbjct: 694 SISEIESRHKEQPASSSISPRYPWTSELEHRLKETFKLSGFRPHQLEAINATLSGRDVFV 753
Query: 112 IMAAGGGKSLCYQLPAVLREG----IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSK 167
+M GGGKSLCYQLPAV++ G +V+SPL+SL+QDQV L I A M +S +
Sbjct: 754 LMPTGGGKSLCYQLPAVIKSGKTRGTTVVISPLISLMQDQVEHLLDNNIKACMFSSKGTA 813
Query: 168 EDEK-----FIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAH 222
+ + FI+ G L ++Y++PE IS S++ L+K + G+L+ + IDEAH
Sbjct: 814 DQRRQHFNLFIH-------GFLDLIYMSPEMISASEQCKRALKKLYDDGKLARVVIDEAH 866
Query: 223 CCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTIN 282
C S WGHDFRPDYK L K +FPD+PM+ALTATA ++V+ D++ L + + + N
Sbjct: 867 CVSNWGHDFRPDYKELKYFKREFPDIPMIALTATANEQVRMDIIHNLELNDPVFLKQSFN 926
Query: 283 RPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISA 342
R NL+Y V +K+ K I +++ I+ + N ++GIVYC S+ CEQ + L + GI A
Sbjct: 927 RNNLYYEVTKKT---KNSIFQMSDEIKSRFKN-QTGIVYCHSKNSCEQTSALLEKSGIKA 982
Query: 343 DYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQE 402
+YHA M+ + R +V W +++QVI TVAFGMGI+KPDVRFV H ++ +++E YYQE
Sbjct: 983 AFYHAGMEPDDRLRVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQE 1042
Query: 403 SGRAGRDGLPSECLLFFRPADVPRQSSMV 431
+GRAGRDG S C+ +F D+ +M+
Sbjct: 1043 TGRAGRDGKFSHCITYFSFRDIRSIQTMI 1071
>gi|375129367|ref|YP_004991462.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii NCTC 11218]
gi|315178536|gb|ADT85450.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii NCTC 11218]
Length = 611
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 234/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQE+I + ++GRD LVIM GGGKSLCYQ+PA+ REG+ +V+SPL+SL+
Sbjct: 22 DVFGYQTFRDGQQEVIESAVAGRDALVIMPTGGGKSLCYQIPALAREGVTVVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST S+E IY + G+ LK+LYV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECVNSTQSREALMGIYNRMHSGQ--LKLLYVSPERVLTGE-FIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
H L++I++DEAHC SQWGHDFRP+Y LG LK QFP VP+MALTATA ++D
Sbjct: 139 ----HNLPLAMIAVDEAHCISQWGHDFRPEYAALGQLKQQFPQVPIMALTATADDATRSD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L++ ++ + +RPN+ Y + EK + ++ +Y+ GI+YC S
Sbjct: 195 ILSRLNLTDPHVYLGSFDRPNIRYTLMEKHKP----VSQVIRYLDTQ--KGHCGIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQEPGRAGRDGLPAEAVMLYDPADIAWLRRMLDEKSDGPQ 363
>gi|386282516|ref|ZP_10060164.1| ATP-dependent DNA helicase recQ [Escherichia sp. 4_1_40B]
gi|386120366|gb|EIG68995.1| ATP-dependent DNA helicase recQ [Escherichia sp. 4_1_40B]
Length = 611
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSG D LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 12 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGCDCLVVMPTGGGKSLCYQIPALLLNGLTV 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 72 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 130 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 185 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ N R V ++ ++ LQ++V TVAF
Sbjct: 239 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 299 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 347
>gi|219111971|ref|XP_002177737.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410622|gb|EEC50551.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 504
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 201/501 (40%), Positives = 284/501 (56%), Gaps = 55/501 (10%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +RA QQ+II + G D+ V+M GGGKSLCYQLPA G+A+V+SPLLSLIQD
Sbjct: 9 FGHQEFRAGQQKIIKNAIQGCDIFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQD 68
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKF-IYKALEK--GEGELKMLYVTPEKISKSKRFMSK 203
QV L LGI A L ST + E+ I + L + G +K+LY+TPEK++ S +
Sbjct: 69 QVQALTQLGIEAVFLASTQDYQTEQMDITRRLNETTAHGGVKLLYITPEKLNNSTMIQNI 128
Query: 204 LEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQN 263
+ + + +S +DEAHC S WGHDFRPDY L ++ ++P+VP+MALTATA +KV N
Sbjct: 129 IRRLCNKNLISRFVVDEAHCLSDWGHDFRPDYMRLDSVRREYPNVPLMALTATANEKVVN 188
Query: 264 DLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
D + L ++ ++ S+ NR NL Y VR+K ++ IA YI S P ESG+VYC
Sbjct: 189 DAIRALGMKNEYRYQSSFNRSNLHYEVRKKDG---QTLEVIADYI-ASRP-KESGVVYCL 243
Query: 324 SRKECEQVAQEL----RQRG----ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
SRK+CE+ +Q+L RQR I +YHAD+D + RE+ H WS + V+ TVAF
Sbjct: 244 SRKDCEKTSQKLQEIARQRPGCNRIRISFYHADLDPHEREQRHREWSNGGVSVLCATVAF 303
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD-------VPRQS 428
GMGI+KPDVR+VIH+S+ KS+ YYQESGRAGRDG ++C+L++ D + + S
Sbjct: 304 GMGIDKPDVRYVIHYSMPKSITHYYQESGRAGRDGDDADCILYYHYKDKKILENLITKSS 363
Query: 429 SMVFYENSGLQ--NLYDIVRYSQYPLHWNIEKVRLVIF-EKLQ--QVNLFCMVVLAGH-- 481
+ + Q LY V+Y + L ++L F E + + N C AG
Sbjct: 364 KNPHSQTTRRQIDQLYGCVQYCE-DLFRCRRTMQLEFFGEHFERGKCNKTCDNCKAGRTP 422
Query: 482 --------AQCIISLLQDIQDNNQRLTMLQLV------DKMKIKLKEID----------S 517
A+ II+L D+ + T L + K + +K ID
Sbjct: 423 DRRDLTEDAKTIINLHTDVSKQKRNGTTLHQITELFRGSKSQAAVKFIDVKKLPGYGAGR 482
Query: 518 DLKREEIEQLVLQLIIDRVLV 538
+ K+ EI+++V LI +R LV
Sbjct: 483 NYKKFEIDKIVHALIFERTLV 503
>gi|225450636|ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Vitis
vinifera]
Length = 602
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 166/372 (44%), Positives = 232/372 (62%), Gaps = 11/372 (2%)
Query: 67 ENWSGTFEWDS--RADDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
E+ +GT +++ DD L +FG +R Q + A ++ RD V+M GGGKSL
Sbjct: 173 EDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQHQACKASVTKRDCFVLMPTGGGKSL 232
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKG 180
CYQLPA L+ G+ +VV PLLSLIQDQ++ L GIPA L+S + + K L K
Sbjct: 233 CYQLPATLQPGVTVVVCPLLSLIQDQIITLNLNFGIPATFLSSQQTASQAAAVLKELRKD 292
Query: 181 EGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI 240
+ K+LYVTPE+I+ + F L+ H G+L+ +DEAHC SQWGHDFRPDY+ LG
Sbjct: 293 KPSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRELGC 352
Query: 241 LKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVV 300
LK FPDVP+MALTATATQ V+ D++ L I + ++ +R NL Y V K+ K
Sbjct: 353 LKQNFPDVPVMALTATATQPVRKDILNSLRIPHALVLETSFDRSNLKYEVIGKT---KEP 409
Query: 301 IDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHM 359
+ ++ + +++ + N GIVYC S+ EC +V++ L + I YYHA + R V
Sbjct: 410 LKQLGQLLKDRFKNL-CGIVYCLSKSECAEVSKFLNGKCKIKTVYYHAGLSARQRIDVQK 468
Query: 360 RWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
+W K+ +I T+AFGMGINKP+VRFVIH+++SKS+E YYQESGRAGRD LP+ C+ +
Sbjct: 469 KWHTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDLPAVCMALY 528
Query: 420 RPADVPRQSSMV 431
+ D R M+
Sbjct: 529 QKKDFSRVVCML 540
>gi|238786204|ref|ZP_04630153.1| ATP-dependent DNA helicase recQ [Yersinia bercovieri ATCC 43970]
gi|238712894|gb|EEQ04957.1| ATP-dependent DNA helicase recQ [Yersinia bercovieri ATCC 43970]
Length = 610
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 232/340 (68%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEIINA L G+D LV+M GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIINATLEGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++ F+ +L
Sbjct: 79 KDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQ--IKLLYIAPERLVMES-FLDQL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
H R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA + + D
Sbjct: 136 ----HQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPHLPVIALTATADEATRGD 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L++ + + VS+ +RPN+ Y + EK +D++ +++Q+ +SGI+YC S
Sbjct: 192 IVRLLNLHQPLIQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E L+ RG+S YHA +D R V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAHVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADM 345
>gi|237727934|ref|ZP_04558415.1| ATP-dependent DNA helicase RecQ [Citrobacter sp. 30_2]
gi|226910383|gb|EEH96301.1| ATP-dependent DNA helicase RecQ [Citrobacter sp. 30_2]
Length = 609
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 233/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +VVS
Sbjct: 13 AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSGQ--IRLLYIAPERLMLD- 129
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P +ALTATA
Sbjct: 130 ---NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SG
Sbjct: 186 ETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGISA YHA ++ R +V ++ ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|238756279|ref|ZP_04617594.1| ATP-dependent DNA helicase recQ [Yersinia ruckeri ATCC 29473]
gi|238705485|gb|EEP97887.1| ATP-dependent DNA helicase recQ [Yersinia ruckeri ATCC 29473]
Length = 609
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 154/339 (45%), Positives = 233/339 (68%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R QQEIINA L+G+D LV+M GGGKSLCYQ+PA++ +G+ LVVSPL+SL++
Sbjct: 20 TFGYQQFRPGQQEIINATLAGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMK 79
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A L S+ ++E + + G+ +K+LY+ PE++ + F+ +LE
Sbjct: 80 DQVDQLLAYGVAAGCLNSSQTREQQLAVMDGCRNGQ--IKLLYIAPERLVM-ENFLEQLE 136
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
R +L+++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA + + D+
Sbjct: 137 HW----RPALLAVDEAHCISQWGHDFRPEYRALGQLKRRFPALPVIALTATADEATRGDI 192
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ +L + + + VS+ +RPN+ Y + EK +D++ +++Q+ +SGI+YC SR
Sbjct: 193 VRLLDLNQPLIQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSGIIYCNSR 246
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMGINKP+VR
Sbjct: 247 AKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVR 306
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 307 FVVHFDIPRTIESYYQETGRAGRDGLPAEAILLYDPADM 345
>gi|455645205|gb|EMF24269.1| ATP-dependent DNA helicase RecQ [Citrobacter freundii GTC 09479]
Length = 609
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 233/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +VVS
Sbjct: 13 AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLMLD- 129
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P +ALTATA
Sbjct: 130 ---NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SG
Sbjct: 186 ETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGISA YHA ++ R +V ++ ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|422337702|ref|ZP_16418672.1| ATP-dependent DNA helicase recQ [Aggregatibacter aphrophilus F0387]
gi|353345034|gb|EHB89332.1| ATP-dependent DNA helicase recQ [Aggregatibacter aphrophilus F0387]
Length = 631
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/348 (48%), Positives = 235/348 (67%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A DV +VFG ++R QQEII+A LSG+D LVIMA G GKSLCYQ+PA+ +G+ LV
Sbjct: 30 SVALDVLHSVFGYQSFRKGQQEIIHAALSGQDCLVIMATGTGKSLCYQIPALCFDGMTLV 89
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VSPL+SL++DQV L GI A L ST T +E ++ +A+ G+LK+LY++PEK+
Sbjct: 90 VSPLISLMKDQVDQLRTNGIEADYLNSTQTFEEQQQVQNRAIS---GQLKLLYLSPEKV- 145
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F + C+ +S I+IDEAHC SQWGHDFRP+Y LG LK FP VP+MALTA
Sbjct: 146 MTNSFFQFISHCN----VSFIAIDEAHCISQWGHDFRPEYTQLGGLKGCFPKVPIMALTA 201
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA Q Q D+++ L + + V + +RPN+ Y + EK ++++ +++
Sbjct: 202 TADQTTQQDILQNLRLNRPHFHVGSFDRPNIRYTLVEKFKP----MEQLCRFVLAQ--KG 255
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SR + E++A+ L +G+ A YHA M+ REKV + ++ +QV+V T+AF
Sbjct: 256 KSGIVYCNSRNKVERIAETLCNKGVRAAAYHAGMENTLREKVQRDFQRDNIQVVVATIAF 315
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 316 GMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 363
>gi|291615730|ref|YP_003518472.1| RecQ [Pantoea ananatis LMG 20103]
gi|378769205|ref|YP_005197680.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis LMG 5342]
gi|386081281|ref|YP_005994806.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis PA13]
gi|291150760|gb|ADD75344.1| RecQ [Pantoea ananatis LMG 20103]
gi|354990462|gb|AER34586.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis PA13]
gi|365188693|emb|CCF11643.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis LMG 5342]
Length = 608
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 233/355 (65%), Gaps = 13/355 (3%)
Query: 70 SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
S ++ A V + FG +R QQ IIN LSGRD LV+M GGGKSLCYQ+PA++
Sbjct: 4 SAVLNQEALAQQVLQDTFGYQQFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALV 63
Query: 130 REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYV 189
REG+ LVVSPL+SL++DQV L A G+ A L ST ++E ++ + G +K+LY+
Sbjct: 64 REGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTMTREQQQVVMADCRNGR--VKLLYI 121
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
PE++ F+ L ++++DEAHC SQWGHDFRP+Y LG ++ +FPD+P
Sbjct: 122 APERLMMDN-FLDSLAHWQPC----MLAVDEAHCISQWGHDFRPEYGALGQMRQRFPDLP 176
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATA + + D++ +LH++ + +S+ +RPN+ Y + EK +++ +Y+Q
Sbjct: 177 VMALTATADETTRLDIINLLHMQDPLIQISSFDRPNIRYTLVEKFKP----TEQLLRYVQ 232
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVI 369
+ + GI+YC SR + E A L+ RG+S YHA +D R +V + ++ LQ++
Sbjct: 233 DQ--RGKCGIIYCNSRAKVEDTAARLQSRGLSVGAYHAGIDSAQRARVQEAFQRDDLQIV 290
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 291 VATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|403364021|gb|EJY81760.1| ATP-dependent DNA helicase, RecQ family protein [Oxytricha
trifallax]
Length = 923
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 286/509 (56%), Gaps = 42/509 (8%)
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
W T F WD + VF + NQ+EIINA L+G+DV+ ++ GGGKSL +QL A
Sbjct: 329 WRDTKFPWDQHIQEFNQKVFRNKTFLENQREIINAALNGKDVMALIPTGGGKSLTFQLTA 388
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
++ G V+ PL++LI+DQ+ L L + + S + +F L + +K++
Sbjct: 389 LMNNGYTFVIMPLIALIEDQIEQLRRLKVKC--VYYNRSIKQGQFYTDLLANSDPLMKLI 446
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
Y+TPEK+ ++K F++ L+K + R++ IDE HC S WG DFR DY+ L IL+ ++P
Sbjct: 447 YLTPEKLVQTKPFINILDKLYQDNRIARFVIDEVHCVSHWGQDFRKDYRELQILRMRYPT 506
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
VPM+ LTATAT V+ D+++ L + + F S+ NRPNL Y +R+K+ + K + ++I
Sbjct: 507 VPMIVLTATATIAVKYDIVKHLKLDNIVFFQSSFNRPNLLYEIRDKAKIKKNIAEDIIML 566
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
+++ +SGI+YC SR ECE++ +EL + + DYYHA M+ N R + RW +N++
Sbjct: 567 LRDRKYVYQSGIIYCLSRTECEELCRELSEFDVKCDYYHAKMNENERRIIQQRWMRNEIH 626
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
+I+ T+AFG+GINK DVRFVIH ++ KS+E Y QE GRAGRDG + C+L++ AD R
Sbjct: 627 IIIATIAFGLGINKRDVRFVIHTTIPKSLENYAQECGRAGRDGENANCILYYSYADRKRL 686
Query: 428 SSMVF--------YENSGLQNLYDIVRYSQYPLHWNIEKVRLVIFE--KLQQVNLFCMVV 477
+ +N L LY I+ + + P + + + E K ++ N C
Sbjct: 687 EFFIISNTENTAGRKNENLHALYKILEFCEEPYLCRRKILLNYLGEDFKSKKCNNMCDNC 746
Query: 478 LAG----------HAQCIISLLQDIQDNNQRLTMLQLVDKMK------------IKLKEI 515
G A+ ++++++ LT++Q+ ++ K+ EI
Sbjct: 747 RKGLRVAEIDFTEQARYVVAMVESALKKKMDLTLIQICKFLRGKQCVMSNPNKTTKMDEI 806
Query: 516 D-------SDLKREEIEQLVLQLIIDRVL 537
SD E I+++V++L+I++VL
Sbjct: 807 KQSYYGRLSDYSEELIKRIVMRLLINKVL 835
>gi|197333996|ref|YP_002154839.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri MJ11]
gi|197315486|gb|ACH64933.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri MJ11]
Length = 611
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 239/357 (66%), Gaps = 13/357 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R Q+E+INAVL G+D LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL+
Sbjct: 22 DVFGYQEFRVGQEEVINAVLEGKDSLVIMPTGGGKSLCYQIPALVFEGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST +E++ I+ + G+ +KMLYV+PE++ + FM +L
Sbjct: 82 KDQVDQLKANGVKAECLNSTIEREEQIAIWNRVNAGQ--VKMLYVSPERVMM-RDFMDRL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E + L +I++DEAHC SQWGHDFRP+Y +LG +K +FP VP+MALTATA + + D
Sbjct: 139 ESLN----LCMIAVDEAHCISQWGHDFRPEYASLGQIKQRFPSVPIMALTATADEATRKD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + +++ + +RPN+ Y V EK + +I +Y+ ++ G++YC S
Sbjct: 195 ILHRLSLPDPHQYLGSFDRPNIRYTVLEKHKP----VSQIVRYLATQ--KNQCGVIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E + ++L I A YHA +D++ R V + ++ +Q++V TVAFGMGINK +V
Sbjct: 249 RKKVEMLTEKLCNNHIRAASYHAGLDLDERNYVQEAFQRDDIQIVVATVAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNL 441
RFV H + K++E+YYQE+GRAGRDGLP+E ++ + PAD+ +V + G Q L
Sbjct: 309 RFVAHFDIPKNIESYYQETGRAGRDGLPAEAVMLYDPADIVWLRKLVEEKPEGPQKL 365
>gi|348680141|gb|EGZ19957.1| hypothetical protein PHYSODRAFT_312852 [Phytophthora sojae]
Length = 1112
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 171/388 (44%), Positives = 236/388 (60%), Gaps = 21/388 (5%)
Query: 78 RADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVV 137
RA V +VFG A+R NQ+ + S RDV V+M GGGKSLCYQLPA + +G+ +VV
Sbjct: 295 RAKRVLRDVFGHNAFRPNQERTVMEAFSRRDVFVLMPTGGGKSLCYQLPACIDDGVTIVV 354
Query: 138 SPLLSLIQDQVMCLAALGIPAHMLTSTTSKED-EKFIYKALEKGEGELKMLYVTPEKISK 196
SPL+SLIQDQV L AL + L + +K I L +KMLYVTPEKI+
Sbjct: 355 SPLVSLIQDQVQQLEALDVGVANLNGDQDYDTVQKPIISELFSNRIRIKMLYVTPEKIAS 414
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
S + E G L+ IDEAHC SQWGHDFR DY LG L+++FP VP+MALTAT
Sbjct: 415 SGMLNNLFESLEKRGLLARFVIDEAHCISQWGHDFRKDYMTLGSLRSKFPSVPIMALTAT 474
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A + + D+++ L ++ S+ NRPNL Y VR+K+S + EIA Y+++ +
Sbjct: 475 ANTQTEADIVKNLKLKNPFITRSSFNRPNLTYDVRKKTS---KFMTEIADYVRKHI--DD 529
Query: 317 SGIVYCFSRKECEQVAQEL--------RQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
SGI+YC S+K+CEQ A +L ++ +YHA ++ R H WSK K+++
Sbjct: 530 SGIIYCLSKKDCEQTADKLIKALGFEHTRKASQISFYHAGLEPEDRAYRHHEWSKGKIKL 589
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
I TVAFGMGINKPDVR+VIHH++ +SV YYQE+GRAGRDG + C+L++ D+ R+
Sbjct: 590 ICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAGRDGEVANCILYYSFLDLTRRR 649
Query: 429 SMVF-------YENSGLQNLYDIVRYSQ 449
++ + N LQNL + + +
Sbjct: 650 KLITKDRDNMQHRNVHLQNLRRMTEFCE 677
>gi|219870290|ref|YP_002474665.1| ATP-dependent DNA helicase RecQ, superfamily II [Haemophilus
parasuis SH0165]
gi|219690494|gb|ACL31717.1| ATP-dependent DNA helicase RecQ, superfamily II [Haemophilus
parasuis SH0165]
Length = 609
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 162/348 (46%), Positives = 235/348 (67%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
++A+ V NVFG ++R Q E+I A+LSG+D LVIM GGGKSLCYQ+PA+ EGI LV
Sbjct: 7 AKAETVLHNVFGYQSFRQGQSEVIEAILSGKDCLVIMTTGGGKSLCYQVPALCFEGITLV 66
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI-YKALEKGEGELKMLYVTPEKIS 195
+SPL+SL++DQV L G+ A + ST + E+++ + KA+ G+LK+LY++PEK+
Sbjct: 67 ISPLISLMKDQVDQLLTNGVEAGYINSTQTIEEQQAVEQKAIS---GQLKLLYLSPEKVM 123
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
S F + C ++SLI++DEAHC SQWGHDFRP+Y LG L+ FP++P++ALTA
Sbjct: 124 TSN-FFQFISLC----KISLIAVDEAHCVSQWGHDFRPEYTLLGGLRKTFPNIPLVALTA 178
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ L + ++ + +RPN+ Y V+EK +D++ K+I S
Sbjct: 179 TADPTTRFDIIHHLKLEDPHTYLGSFDRPNIRYTVQEKFKP----VDQLIKFI--SSQQG 232
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SRK+ E++ ++L S YHA M + RE V + ++ +Q++V TVAF
Sbjct: 233 KSGIVYCNSRKKVEELTEKLSSHRFSVMGYHAGMTMQQRETVQNAFQRDNIQIVVATVAF 292
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV+H L +S+E YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 293 GMGINKSNVRFVVHFDLPRSIEAYYQETGRAGRDDLPAEAVLFYDPAD 340
>gi|332534725|ref|ZP_08410553.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035812|gb|EGI72296.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas haloplanktis
ANT/505]
Length = 596
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 238/341 (69%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q+ +I+A ++G+D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 11 VFGYSEFRDGQKAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 70
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G++K+LYV PEK+ + + F+ +L
Sbjct: 71 DQVTQLQALGVKAAYVNNSLAREEQQLVYQQLH--QGQIKLLYVAPEKVLQ-REFLERLS 127
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 128 HLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRFDI 183
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK + ++ +Y++E S+SGI+YC SR
Sbjct: 184 VEQLKLQQPYIHTGSFDRPNIRYTIEEKFKP----MVQLLRYLKEQ--KSQSGIIYCTSR 237
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A++L G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 238 KRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 297
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E+YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 298 FVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGR 338
>gi|440228947|ref|YP_007342740.1| ATP-dependent DNA helicase RecQ [Serratia marcescens FGI94]
gi|440050652|gb|AGB80555.1| ATP-dependent DNA helicase RecQ [Serratia marcescens FGI94]
Length = 614
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 233/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ II+AV G+D LV+M GGGKSLCYQ+PA++ EG+ LVVS
Sbjct: 17 AEQVLRDTFGYQQFRPGQQTIIDAVTRGQDCLVVMPTGGGKSLCYQIPALMLEGLTLVVS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A ST ++E + + G +KMLY+ PE++
Sbjct: 77 PLISLMKDQVDQLLANGVAAACYNSTQTREQQLEVMAGCRSGA--IKMLYIAPERLMMDS 134
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+S L+ C A ++++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA
Sbjct: 135 -FLSLLDSCPPA----MLAVDEAHCISQWGHDFRPEYRALGQLKQRFPAMPVVALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +ND+ +L ++ + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 190 ETTRNDITRLLALQDPLIQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMG
Sbjct: 244 IIYCNSRAKVEDTAARLQSRGLSVAAYHAGLDNARRAQVQEGFQRDDLQVVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 304 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADM 349
>gi|419801388|ref|ZP_14326616.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK262]
gi|419845355|ref|ZP_14368628.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK2019]
gi|385193739|gb|EIF41095.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK262]
gi|386415831|gb|EIJ30351.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK2019]
Length = 618
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 229/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+I+A LSG+D LV+MA G GKSLCYQ+PA+ G+ LV+SPL+SL+
Sbjct: 21 SVFGYQSFRKGQEEVIHAALSGQDALVVMATGNGKSLCYQIPALCFPGLTLVISPLISLM 80
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+ LK+LYV+PEK+ + F
Sbjct: 81 KDQVDQLQANGIEADFLNSSQTPEQQQQVENKLISGQ--LKLLYVSPEKVMTNSFF---- 134
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+ P+MALTATA + D
Sbjct: 135 -QLISYAQISFIAIDEAHCISQWGHDFRPEYTQLGGLKAAFPNAPIMALTATADYATRQD 193
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + K++ + +RPN+ Y + EK ++++ +++ +SGIVYC S
Sbjct: 194 ILTHLKLDNPHKYIGSFDRPNIRYTLEEKFKP----MEQLTRFVLAQ--KGKSGIVYCNS 247
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 248 RSKVERIAEILRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNV 307
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 308 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 346
>gi|283787504|ref|YP_003367369.1| ATP-dependent DNA helicase [Citrobacter rodentium ICC168]
gi|282950958|emb|CBG90635.1| ATP-dependent DNA helicase [Citrobacter rodentium ICC168]
Length = 609
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 157/349 (44%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ V+SGRD LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTVMSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQLEVMAGCRSGK--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + A L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLEHLAHWNPA----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG+SA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGLSAAAYHAGLENHVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|365103530|ref|ZP_09333396.1| ATP-dependent DNA helicase recQ [Citrobacter freundii 4_7_47CFAA]
gi|363645202|gb|EHL84473.1| ATP-dependent DNA helicase recQ [Citrobacter freundii 4_7_47CFAA]
Length = 604
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 232/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +VVS
Sbjct: 8 AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 67
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 68 PLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSGQ--IRLLYIAPERLMLDN 125
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P +ALTATA
Sbjct: 126 -FLEHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALTATAD 180
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SG
Sbjct: 181 ETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSG 234
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGISA YHA ++ R +V ++ ++ LQ++V TVAFGMG
Sbjct: 235 IIYCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMG 294
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 295 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 340
>gi|377579442|ref|ZP_09808410.1| ATP-dependent DNA helicase RecQ [Escherichia hermannii NBRC 105704]
gi|377539235|dbj|GAB53575.1| ATP-dependent DNA helicase RecQ [Escherichia hermannii NBRC 105704]
Length = 609
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 236/349 (67%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ IIN VL GRD LV+M GGGKSLCYQ+PA+++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIINTVLDGRDCLVVMPTGGGKSLCYQIPALVKAGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++++++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQTRDEQQAVMAGCRTGK--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ +L + ++++DEAHC SQWGHDFR +Y LG L+ +FPDVP MALTA
Sbjct: 128 LDN-FLDQLIHWNPV----MLAVDEAHCISQWGHDFRREYALLGQLRDRFPDVPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADETTRRDIVNLLGLHDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENDVRANVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|145640806|ref|ZP_01796388.1| frataxin-like protein [Haemophilus influenzae R3021]
gi|145274320|gb|EDK14184.1| frataxin-like protein [Haemophilus influenzae 22.4-21]
Length = 619
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 230/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
++FG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ +G+ LV+SPL+SL+
Sbjct: 22 SIFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLI--SGQLKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++ I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA Q D
Sbjct: 136 -QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L+++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ AD
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYESAD 347
>gi|378581806|ref|ZP_09830449.1| ATP-dependent DNA helicase [Pantoea stewartii subsp. stewartii
DC283]
gi|377815544|gb|EHT98656.1| ATP-dependent DNA helicase [Pantoea stewartii subsp. stewartii
DC283]
Length = 608
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 234/355 (65%), Gaps = 13/355 (3%)
Query: 70 SGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
S ++ A V + FG +R QQ IIN L+GRD LV+M GGGKSLCYQ+PA++
Sbjct: 4 SAVLNQEALAQQVLQDTFGYQQFRPGQQAIINEALNGRDCLVVMPTGGGKSLCYQIPALV 63
Query: 130 REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYV 189
REG+ LVVSPL+SL++DQV L A G+ A L ST ++E ++ + G +K+LY+
Sbjct: 64 REGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTMTREQQQNVMADCRNGR--VKLLYI 121
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
PE++ F+ L A ++++DEAHC SQWGHDFRP+Y LG ++ +FPD+P
Sbjct: 122 APERLMMDN-FLESLAHWQPA----MLAVDEAHCISQWGHDFRPEYGALGQMRQRFPDLP 176
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
+MALTATA + + D++ +LH++ + +S+ +RPN+ Y + EK +++ +Y+Q
Sbjct: 177 VMALTATADETTRLDIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKP----TEQLLRYVQ 232
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVI 369
+ + GI+YC SR + E A L+ RG+S YHA +D R +V + ++ LQ++
Sbjct: 233 DQ--RGKCGIIYCNSRAKVEDTAARLQSRGLSVGAYHAGIDSAQRARVQEAFQRDDLQIV 290
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 291 VATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|395230323|ref|ZP_10408628.1| ATP-dependent DNA helicase recQ [Citrobacter sp. A1]
gi|424730831|ref|ZP_18159424.1| atp-dependent dna helicase [Citrobacter sp. L17]
gi|394716054|gb|EJF21831.1| ATP-dependent DNA helicase recQ [Citrobacter sp. A1]
gi|422894736|gb|EKU34544.1| atp-dependent dna helicase [Citrobacter sp. L17]
Length = 604
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 233/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V FG +R Q+EII+ VLSGRD LV+M GGGKSLCYQ+PA+L G+ +VVS
Sbjct: 8 AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 67
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 68 PLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLMLD- 124
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P +ALTATA
Sbjct: 125 ---NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALTATAD 180
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SG
Sbjct: 181 ETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSG 234
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGISA YHA ++ R +V ++ ++ LQ++V TVAFGMG
Sbjct: 235 IIYCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMG 294
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 295 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 340
>gi|54310561|ref|YP_131581.1| ATP-dependent DNA helicase RecQ [Photobacterium profundum SS9]
gi|46915004|emb|CAG21779.1| putative ATP-dependent DNA helicase RecQ [Photobacterium profundum
SS9]
Length = 615
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 234/340 (68%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQE+I AV+ G+D LVIM GGGKSLCYQ+PA++ GI LV+SPL+SL+
Sbjct: 23 DVFGYQSFRIGQQEVIEAVVEGQDCLVIMPTGGGKSLCYQIPALIMPGITLVISPLISLM 82
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST S+E+ + A+ EG+LK++YV+PE++ + F+ +L
Sbjct: 83 KDQVDQLNANGVAAAYINSTMSREEVMETFLAMR--EGDLKLVYVSPERVLM-RDFIERL 139
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ LS++++DEAHC SQWGHDFRP+Y LG LK F ++P+MALTATA +ND
Sbjct: 140 ----YETPLSMVAVDEAHCVSQWGHDFRPEYAALGTLKQHFENLPIMALTATADDTTRND 195
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ L + ++ + +RPN+ Y + EK + ++ +Y+ + + GIVYC S
Sbjct: 196 ITSRLGLTNPHDYLGSFDRPNIRYTLLEKHKP----MTQLTRYL--TGVRGQCGIVYCNS 249
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK EQ+A +LR G+ A YHA +D + R +V + ++ + ++V TVAFGMGINKP+V
Sbjct: 250 RKRVEQIAGKLRDSGVRAAAYHAGLDHDERGRVQESFQRDDIHIVVATVAFGMGINKPNV 309
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H+ + +++E+YYQE+GRAGRDGLP+E ++F+ P+D+
Sbjct: 310 RFVVHYDIPRNIESYYQETGRAGRDGLPAEAVMFYDPSDL 349
>gi|365846070|ref|ZP_09386576.1| ATP-dependent DNA helicase RecQ [Yokenella regensburgei ATCC 43003]
gi|364574417|gb|EHM51877.1| ATP-dependent DNA helicase RecQ [Yokenella regensburgei ATCC 43003]
Length = 623
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 241/371 (64%), Gaps = 15/371 (4%)
Query: 54 SPIQYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIM 113
+P+ G+ T + + F S A V FG +R Q+ II VL GRD LV+M
Sbjct: 4 APVFNSGNGVTVAQ--AEVFNQQSLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVM 61
Query: 114 AAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI 173
GGGKSLCYQ+PA++ +G+ +VVSPL+SL++DQV L A G+ A L ST ++E ++ +
Sbjct: 62 PTGGGKSLCYQIPALVLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEV 121
Query: 174 YKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRP 233
G+ +++LY+ PE++ F+ L + ++++DEAHC SQWGHDFRP
Sbjct: 122 MAGCRTGK--IRLLYIAPERLMLDN-FLDNLSHWNPV----MLAVDEAHCISQWGHDFRP 174
Query: 234 DYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREK 293
+Y LG L+ +FP +P MALTATA + D++ +L + + +S+ +RPN+ YM+ EK
Sbjct: 175 EYAALGQLRQRFPALPFMALTATADDTTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEK 234
Query: 294 SSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINA 353
+D++ +Y+QE +SGI+YC SR + E A L+ RGISA YHA ++ +
Sbjct: 235 FKP----LDQLMRYVQEQ--RGKSGIIYCNSRAKVEDTAARLQSRGISAGAYHAGLENHI 288
Query: 354 REKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPS 413
R +V ++ ++ LQ++V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+
Sbjct: 289 RAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA 348
Query: 414 ECLLFFRPADV 424
E +LF+ PAD+
Sbjct: 349 EAMLFYDPADM 359
>gi|374108619|gb|AEY97525.1| FAFL159Wp [Ashbya gossypii FDAG1]
Length = 1323
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 231/364 (63%), Gaps = 10/364 (2%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR- 130
T W + NVF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPA+++
Sbjct: 545 THPWSAELYHKLHNVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAIVKA 604
Query: 131 ---EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
G +V+SPL+SL+ DQV L A I A M +S + E + + G L ++
Sbjct: 605 GCTHGTTIVISPLISLMHDQVEHLLAKNIKASMFSSKGTAEQRRQTFNLFINGL--LDLV 662
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
Y++PE +S S + + ++K + +L+ I +DEAHC S WGHDFRPDYK L K ++PD
Sbjct: 663 YISPEMVSASVQCRNAIQKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKVEYPD 722
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
+PM+ALTATA+++V+ D++ LH+++ + + NR NL+Y V K K + +I+
Sbjct: 723 IPMLALTATASEQVRMDIIHNLHLKEPVFLKQSFNRSNLYYEVLRKD---KNSLKDISHS 779
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+ + ++GI+YC S+ CEQ A ++ G+ YYHA M+ + R + +W +K+Q
Sbjct: 780 IKTRF-KGQTGIIYCHSKNSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQQQWQSDKIQ 838
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VI TVAFGMGI+KPDVRFV H+++ +++E YYQE+GRAGRDG S C++++ DV
Sbjct: 839 VICATVAFGMGIDKPDVRFVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMYYSFRDVRNI 898
Query: 428 SSMV 431
SM+
Sbjct: 899 QSMI 902
>gi|425450984|ref|ZP_18830806.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
gi|389767941|emb|CCI06812.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
Length = 701
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 235/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + ++ E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRDRESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y V+ K+S ++ +YI+ SGIVYC
Sbjct: 188 EDIIQQLGLRDASIHIASFNRPNLYYEVQPKTSKS---YQQLYQYIK---GKKGSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK +QVA+ L++ GI+A YHA M+ R + R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFV+H+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|357137820|ref|XP_003570497.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Brachypodium
distachyon]
Length = 777
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 222/333 (66%), Gaps = 4/333 (1%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q E I AVLSGRD +M GGGKS+CYQ+PA+++ GI LV+SPL++L+++
Sbjct: 32 FGYSGFRGRQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALVKAGIVLVISPLIALMEN 91
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L + G+PA L+ST + +++ IY+ L+ G LK+LYVTPE ++ + F +KL K
Sbjct: 92 QVTSLKSKGVPAEFLSSTQTAKNKNEIYEDLDSGNPSLKLLYVTPELVA-TFGFKAKLTK 150
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ G L L++IDEAHC S WGHDFRP Y+ + L+ QFPD+P++ALTATA KVQ D++
Sbjct: 151 LYSRGLLGLVAIDEAHCISTWGHDFRPSYRKISSLRKQFPDIPILALTATAVPKVQKDVI 210
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L ++ + ++ NRPN+FY VR K + V D I+ ++ S + I+YC R
Sbjct: 211 SSLCLQNPVILRASFNRPNIFYEVRYKDLLDDVYSD-ISNLLKSS--GNVCSIIYCLERA 267
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
C+ + L Q+GIS+ YHA ++ R V W ++ QV+V TVAFGMGI++ DVR
Sbjct: 268 ACDDLNMHLSQQGISSAVYHAGLNSKVRSAVLDDWLSSRTQVVVATVAFGMGIDRQDVRI 327
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
V H +L KS+E++YQESGRAGRD PS +L++
Sbjct: 328 VCHFNLPKSMESFYQESGRAGRDQQPSRSVLYY 360
>gi|417377000|ref|ZP_12146033.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353591293|gb|EHC49598.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
Length = 609
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|425064148|ref|ZP_18467273.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida X73]
gi|404381741|gb|EJZ78209.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida X73]
Length = 632
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/345 (45%), Positives = 233/345 (67%), Gaps = 13/345 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A DV VFG ++R Q+E+I+A L G+D LVIMA G GKSLCYQ+PA+ EG+ LV+S
Sbjct: 26 ALDVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVIS 85
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A GI A L S+ + +++ + L G LK+LYV+PEK+ +
Sbjct: 86 PLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLM--SGTLKLLYVSPEKVMTTS 143
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F + C ++S ++IDEAHC SQWGHDFRP+Y LG LK+ FP P+MALTATA
Sbjct: 144 -FFHLISHC----KVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATAD 198
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L+++ ++ + +RPN+ Y + EK I+++ +++ +SG
Sbjct: 199 HATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKP----IEQLCRFVLGQ--KGKSG 252
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E++A+ LR +G+SA YHA ++ RE+V + ++ +QV+V T+AFGMG
Sbjct: 253 IIYCNSRSKVERIAESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMG 312
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
INK +VRFV+H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 313 INKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 357
>gi|425466065|ref|ZP_18845368.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
gi|389831578|emb|CCI25550.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
Length = 703
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 235/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + +E E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRERESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y V+ K+S ++ +YI+ +GIVYC
Sbjct: 188 EDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKS---YQQLYQYIK---GQKGAGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK ++VA++L++ GI+A YHA M+ R R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFVIH+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|422784511|ref|ZP_16837291.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10509]
gi|323974402|gb|EGB69530.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10509]
Length = 609
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+EII+ VLSG D LV+M GGGKSLCYQ+PA+L G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGSDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ +GISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|166362830|ref|YP_001655103.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
gi|166085203|dbj|BAF99910.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
Length = 703
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 235/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + +E E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRERESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y V+ K+S ++ +YI+ +GIVYC
Sbjct: 188 EDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKS---YQQLYQYIK---GQKGAGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK ++VA++L++ GI+A YHA M+ R R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFVIH+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|161617078|ref|YP_001591043.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195874257|ref|ZP_02701463.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|417329973|ref|ZP_12114685.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|417344998|ref|ZP_12125224.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|417353823|ref|ZP_12130421.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|417369413|ref|ZP_12140610.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|417387010|ref|ZP_12151555.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|417437013|ref|ZP_12161716.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|417477588|ref|ZP_12171587.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|417514692|ref|ZP_12178426.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|417521684|ref|ZP_12183331.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|417535132|ref|ZP_12188708.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|418818528|ref|ZP_13373999.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418821071|ref|ZP_13376497.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|421882876|ref|ZP_16314125.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|25290797|pir||AH0917 ATP-dependent DNA helicase (EC 3.6.1.-) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504479|emb|CAD07934.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139300|gb|AAO70867.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161366442|gb|ABX70210.1| hypothetical protein SPAB_04911 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195629971|gb|EDX48631.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|353563441|gb|EHC29792.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353563459|gb|EHC29807.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353584285|gb|EHC44436.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353601643|gb|EHC57226.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|353613150|gb|EHC65322.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|353633055|gb|EHC79959.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|353637613|gb|EHC83386.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353640818|gb|EHC85699.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353657336|gb|EHC97802.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|357953490|gb|EHJ80012.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|379987516|emb|CCF86398.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|392785390|gb|EJA41969.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392791354|gb|EJA47842.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
Length = 609
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|302308466|ref|NP_985391.2| AFL159Wp [Ashbya gossypii ATCC 10895]
gi|299790644|gb|AAS53215.2| AFL159Wp [Ashbya gossypii ATCC 10895]
Length = 1323
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 231/364 (63%), Gaps = 10/364 (2%)
Query: 72 TFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR- 130
T W + NVF +P +R NQ E +NA L G+DV V+M GGGKSLCYQLPA+++
Sbjct: 545 THPWSAELYHKLHNVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAIVKA 604
Query: 131 ---EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
G +V+SPL+SL+ DQV L A I A M +S + E + + G L ++
Sbjct: 605 GCTHGTTIVISPLISLMHDQVEHLLAKNIKASMFSSKGTAEQRRQTFNLFINGL--LDLV 662
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPD 247
Y++PE +S S + + ++K + +L+ I +DEAHC S WGHDFRPDYK L K ++PD
Sbjct: 663 YISPEMVSASVQCRNAIQKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKVEYPD 722
Query: 248 VPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKY 307
+PM+ALTATA+++V+ D++ LH+++ + + NR NL+Y V K K + +I+
Sbjct: 723 IPMLALTATASEQVRMDIIHNLHLKEPVFLKQSFNRSNLYYEVLRKD---KNSLKDISHS 779
Query: 308 IQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQ 367
I+ + ++GI+YC S+ CEQ A ++ G+ YYHA M+ + R + +W +K+Q
Sbjct: 780 IKTRF-KGQTGIIYCHSKNSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQQQWQSDKIQ 838
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQ 427
VI TVAFGMGI+KPDVRFV H+++ +++E YYQE+GRAGRDG S C++++ DV
Sbjct: 839 VICATVAFGMGIDKPDVRFVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMYYSFRDVRNI 898
Query: 428 SSMV 431
SM+
Sbjct: 899 QSMI 902
>gi|124002830|ref|ZP_01687682.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123992058|gb|EAY31445.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 712
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/338 (48%), Positives = 233/338 (68%), Gaps = 13/338 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q++II+ VL+G D LV+M GGGKSLCYQ+PA++ EGIA+VVSPL++L+QD
Sbjct: 14 FGYKQFRPLQKDIIDQVLAGNDALVLMPTGGGKSLCYQVPALMMEGIAIVVSPLIALMQD 73
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L I A ST + ++ I + + +G++K+LYV+PEK+ S F+ L++
Sbjct: 74 QVEALQRNDIAAAFYNSTQTSSEQSEIER--QCMDGKIKLLYVSPEKLL-SGTFIEFLQR 130
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+++L +IDEAHC S WGHDFRP+Y L +LK FP VP++ALTATA + +ND++
Sbjct: 131 L----QINLFAIDEAHCISSWGHDFRPEYAQLKMLKKVFPSVPVVALTATADKTTRNDIL 186
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L++++ F+++ +R N +R S G+ I +I KY+ E+ PN +SGI+YC SRK
Sbjct: 187 NQLNLQQPETFLASFDREN----IRLHVSPGQNRIKKIIKYL-ETRPN-QSGIIYCLSRK 240
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EQ+AQ+L+ G SADYYHA MD N R V + K+ +I T+AFGMGI+KP+VRF
Sbjct: 241 STEQIAQKLKDAGFSADYYHAKMDSNRRAAVQQSFLKDDTHIICATIAFGMGIDKPNVRF 300
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
VIH+++ K+VE YYQE GRAGRDGL S+ +LF+ DV
Sbjct: 301 VIHYNMPKNVEGYYQEIGRAGRDGLKSDAILFYSYGDV 338
>gi|452122263|ref|YP_007472511.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|451911267|gb|AGF83073.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 609
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|197364742|ref|YP_002144379.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56130069|gb|AAV79575.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096219|emb|CAR61816.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 609
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|194469151|ref|ZP_03075135.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|416649609|ref|ZP_11809981.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|418492957|ref|ZP_13059431.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418496841|ref|ZP_13063270.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418499706|ref|ZP_13066110.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418506075|ref|ZP_13072415.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418526484|ref|ZP_13092460.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|194455515|gb|EDX44354.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|366054478|gb|EHN18832.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366056408|gb|EHN20732.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366066485|gb|EHN30652.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366070443|gb|EHN34553.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366828694|gb|EHN55575.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372205603|gb|EHP19111.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
Length = 609
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|297581635|ref|ZP_06943557.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC385]
gi|297534042|gb|EFH72881.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC385]
Length = 620
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 234/339 (69%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A L+G D LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL++
Sbjct: 32 VFGYQQFRVGQQEVIEAALAGCDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMK 91
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ IY + G+ LK+LYV+PE++ ++ F+ +L
Sbjct: 92 DQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVLTAE-FIERLS 148
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y +LG LK +FP+VP+MALTATA ++D+
Sbjct: 149 HL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDI 204
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L + + +++ + +RPN+ YM+ EK + ++ +Y++ + GI+YC SR
Sbjct: 205 MQRLQLNEPHQYLGSFDRPNIRYMLVEKHKP----VSQVIRYLETQ--RGQCGIIYCGSR 258
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ LQ++V TVAFGMGINKP+VR
Sbjct: 259 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 318
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YY E+GRAGRDGLP+E ++ + PAD+
Sbjct: 319 FVVHFDIPRNIESYYHETGRAGRDGLPAEAMMLYDPADM 357
>gi|354595778|ref|ZP_09013795.1| ATP-dependent DNA helicase RecQ [Brenneria sp. EniD312]
gi|353673713|gb|EHD19746.1| ATP-dependent DNA helicase RecQ [Brenneria sp. EniD312]
Length = 610
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 232/340 (68%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEIINA +SGRD LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIINATISGRDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST ++E + + G+ +K+LY+ PE+++ S L
Sbjct: 79 KDQVDQLQAYGVSAACLNSTQTREQQHEVMAGCRSGQ--IKLLYIAPERLTTD----SFL 132
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ H R SLI++DEAHC SQWGHDFRP+Y+ LG +K FP +P++ALTATA + ++D
Sbjct: 133 DHLIH-WRPSLIAVDEAHCISQWGHDFRPEYRALGQVKQHFPGLPVIALTATADETTRSD 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L ++ + +S+ +RPN+ Y + EK +D++ ++Q +SGI+YC S
Sbjct: 192 IVRLLDLQSPLVQISSFDRPNIRYTLVEKFKP----LDQLWMFVQGQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E ++ L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RAKVEDISARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGL +E LF+ PAD+
Sbjct: 306 RFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADM 345
>gi|422302785|ref|ZP_16390144.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
gi|389787941|emb|CCI16794.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
Length = 703
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 235/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + +E E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRERESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y V+ K+S ++ +YI+ +GIVYC
Sbjct: 188 EDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKS---YQQLYQYIK---GQKGAGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK ++VA++L++ GI+A YHA M+ R R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFVIH+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|161936203|ref|YP_152887.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
Length = 614
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 15 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 74
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 75 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 132
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 133 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 187
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 188 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 241
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 242 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 301
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 302 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 350
>gi|425441134|ref|ZP_18821420.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
gi|389718248|emb|CCH97777.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
Length = 703
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 235/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + +E E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRERESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y V+ K+S ++ +YI+ +GIVYC
Sbjct: 188 EDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKS---YQQLYQYIK---GQKGAGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK ++VA++L++ GI+A YHA M+ R R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFVIH+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|375267036|ref|YP_005024479.1| ATP-dependent DNA helicase RecQ [Vibrio sp. EJY3]
gi|369842356|gb|AEX23500.1| ATP-dependent DNA helicase RecQ [Vibrio sp. EJY3]
Length = 611
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 235/355 (66%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQE+I+A + G+D LVIM GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 22 DVFGYQKFRDGQQEVIDAAIDGQDSLVIMPTGGGKSLCYQIPALVRNGITLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST S+E+ +Y + G+ LK++YV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECVNSTMSREELLSVYNRMHNGQ--LKLIYVSPERVLM-RDFIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E L++I++DEAHC SQWGHDFRP+Y +LG LK F VP MALTATA + D
Sbjct: 139 ESL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQHFSHVPFMALTATADDATRRD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + +I +Y++ N GI+YC S
Sbjct: 195 ILERLRLNDPQVYLGSFDRPNIRYNLVEKHKP----VSQIIRYLETQKGNC--GIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ F PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADISWLRRMLDEKDDGPQ 363
>gi|317477615|ref|ZP_07936833.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316906220|gb|EFV27956.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 604
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/369 (45%), Positives = 243/369 (65%), Gaps = 21/369 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R Q+EII +L G D LV+M GGGKS+CYQLPA+LREG A+VVSPL+SL++D
Sbjct: 9 FGYDSFRPLQEEIIRHILGGNDALVLMPTGGGKSICYQLPALLREGTAVVVSPLISLMKD 68
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L A GI A L S+ + + + +A EG+LK+LY++PEK+ ++ L
Sbjct: 69 QVEALCANGISAGALNSSNDETENAALRRACM--EGKLKLLYISPEKLLAEANYL--LRD 124
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H +SL +IDEAHC SQWGHDFRP+Y +GIL QFP VP++ALTATA + + D++
Sbjct: 125 MH----ISLFAIDEAHCISQWGHDFRPEYAQMGILHQQFPQVPIIALTATADKITREDII 180
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVR---EKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
+ LH+ F+S+ +RPNL V+ ++ K +ID IA++ ESGI+YC
Sbjct: 181 KQLHLNHPRIFISSFDRPNLSLTVKRGYQQKEKSKAIIDFIARH------PGESGIIYCM 234
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SR + E VAQ L+++GI A YHA + R++ + +++QV+ T+AFGMGI+K +
Sbjct: 235 SRSKTESVAQMLQKQGIRAAVYHAGLSPTRRDEAQDDFINDRVQVVCATIAFGMGIDKSN 294
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ--NL 441
VR+VIH++L KS+E++YQE GRAGRDG+PS+ LLF+ +D+ + F +SG Q N+
Sbjct: 295 VRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLSDLILLTK--FATDSGQQSINI 352
Query: 442 YDIVRYSQY 450
+ R QY
Sbjct: 353 EKLQRMQQY 361
>gi|50123092|ref|YP_052259.1| ATP-dependent DNA helicase RecQ [Pectobacterium atrosepticum
SCRI1043]
gi|49613618|emb|CAG77069.1| ATP-dependent DNA helicase [Pectobacterium atrosepticum SCRI1043]
Length = 608
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 234/340 (68%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEII+A LSG+D LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST ++E + + G+ +K+LY+ PE+++ ++ F+ L
Sbjct: 79 KDQVDQLQAYGVSAACLNSTQTREQQFEVMAGCRTGQ--IKLLYIAPERLT-TESFLDHL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
++SLI++DEAHC SQWGHDFRP+Y+ LG +K +FP +P +ALTATA + +ND
Sbjct: 136 AHW----QISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRND 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L ++ + +S+ +RPN+ Y + EK +D++ ++Q +SGI+YC S
Sbjct: 192 IVRLLDLQSPLIQISSFDRPNIRYTLVEKFKP----LDQLWMFVQAQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R E ++ L+ RG+SA YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RSRVEDISARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGL +E LF+ PAD+
Sbjct: 306 RFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADM 345
>gi|62182427|ref|YP_218844.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|168263151|ref|ZP_02685124.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168822671|ref|ZP_02834671.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194446579|ref|YP_002043188.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|213427355|ref|ZP_03360105.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213649567|ref|ZP_03379620.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|224585773|ref|YP_002639572.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|289828697|ref|ZP_06546492.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|375003823|ref|ZP_09728161.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|375116774|ref|ZP_09761944.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|378961517|ref|YP_005219003.1| ATP-dependent DNA helicase recQ [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|409247635|ref|YP_006888331.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416529343|ref|ZP_11744310.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416540118|ref|ZP_11750292.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416548851|ref|ZP_11755065.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|418762505|ref|ZP_13318633.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418764312|ref|ZP_13320412.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418773202|ref|ZP_13329193.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418777929|ref|ZP_13333850.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418779076|ref|ZP_13334982.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418785638|ref|ZP_13341468.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418791453|ref|ZP_13347215.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418791792|ref|ZP_13347544.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418797728|ref|ZP_13353411.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418801455|ref|ZP_13357089.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418807130|ref|ZP_13362696.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418811291|ref|ZP_13366825.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418826243|ref|ZP_13381486.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418829058|ref|ZP_13384050.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836055|ref|ZP_13390945.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418842971|ref|ZP_13397777.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418847517|ref|ZP_13402271.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418851574|ref|ZP_13406284.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418855043|ref|ZP_13409705.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418859144|ref|ZP_13413751.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418862341|ref|ZP_13416883.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418865911|ref|ZP_13420377.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419788039|ref|ZP_14313738.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419792725|ref|ZP_14318356.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|62130060|gb|AAX67763.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194405242|gb|ACF65464.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|205340978|gb|EDZ27742.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205348083|gb|EDZ34714.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|224470301|gb|ACN48131.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|320088369|emb|CBY98129.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322716920|gb|EFZ08491.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|353074144|gb|EHB39906.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|363552625|gb|EHL36909.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363559478|gb|EHL43644.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363570670|gb|EHL54599.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|374355389|gb|AEZ47150.1| ATP-dependent DNA helicase recQ [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|392618248|gb|EIX00655.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392618380|gb|EIX00781.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392730245|gb|EIZ87491.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392736295|gb|EIZ93459.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392742663|gb|EIZ99749.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392743428|gb|EJA00500.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392751538|gb|EJA08487.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392753920|gb|EJA10840.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392755163|gb|EJA12077.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392768343|gb|EJA25099.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392769553|gb|EJA26284.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392779635|gb|EJA36299.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392780048|gb|EJA36707.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392780419|gb|EJA37072.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392802536|gb|EJA58748.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392805635|gb|EJA61758.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392806235|gb|EJA62346.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392807530|gb|EJA63600.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392808110|gb|EJA64163.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392817089|gb|EJA73006.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392822614|gb|EJA78420.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392830940|gb|EJA86582.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392836344|gb|EJA91928.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392840884|gb|EJA96417.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
Length = 615
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|38345369|emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japonica Group]
Length = 1164
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/369 (46%), Positives = 230/369 (62%), Gaps = 16/369 (4%)
Query: 69 WSGT-FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPA 127
WS T F W + VFG ++R NQ+EIINA +SG DV V+M GGGKSL YQ
Sbjct: 414 WSSTHFAWTKELEANNKRVFGNRSFRPNQREIINATMSGNDVFVLMPTGGGKSLTYQSQN 473
Query: 128 VLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKML 187
V I V + + + ++ I A L+++ +++ I + L K+L
Sbjct: 474 V---SIFEVGTGIKRVGRND---WRKANISAAYLSASMEWSEQQEILRELMSPTCTYKLL 527
Query: 188 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK-----NLGILK 242
YVTPEKI+KS + +LE + G LS I IDEAHC SQWGHDFRPDY+ +LGILK
Sbjct: 528 YVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGHDFRPDYQFFIHQHLGILK 587
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
+FP P++ALTATAT V+ D++++L + CI F + NRPNL Y V K+ K ++
Sbjct: 588 QKFPQTPVLALTATATASVKEDVVQVLGLANCIIFRQSFNRPNLRYFVWPKT---KKCLE 644
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWS 362
+I +I ++ N E GI+YC SR +CE+VA +LR+ G +A +YH MD R + +WS
Sbjct: 645 DIHNFIHANH-NKECGIIYCLSRMDCEKVAAKLREYGHTASHYHGSMDPEDRANIQKQWS 703
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
K+++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRD S C+LF+ +
Sbjct: 704 KDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDSQLSTCVLFYNYS 763
Query: 423 DVPRQSSMV 431
D R MV
Sbjct: 764 DYIRLKHMV 772
>gi|425433706|ref|ZP_18814184.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
gi|389675683|emb|CCH95185.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
Length = 701
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 235/342 (68%), Gaps = 17/342 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ++II A L+ +D+LVIM GGGKSLC+QLPA++++G+ +VVSPL++L+QD
Sbjct: 15 FGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTS----KEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV LA GI A L ST + ++ E I +G++K+LYV PE++ S F+
Sbjct: 75 QVTALADNGIGATFLNSTLNAKQVRDRESLIL------QGKIKLLYVAPERLL-SPSFLD 127
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L + L+ +++DEAHC S WGHDFRP+Y+ + ++ +FP VP++ALTATATQ+V+
Sbjct: 128 FLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVR 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
D+++ L +R +++ NRPNL+Y V+ K+S ++ +YI+ SGIVYC
Sbjct: 188 EDIIQQLGLRDASIHIASFNRPNLYYEVQPKTSKS---YQQLYQYIKGK---KGSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK +QVA+ L++ GI+A YHA M+ R + R+ ++ +Q++V T+AFGMGINKP
Sbjct: 242 ISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFV+H+ L +++E YYQESGRAGRDG P++C LFF AD
Sbjct: 302 DVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADA 343
>gi|427416527|ref|ZP_18906710.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
gi|425759240|gb|EKV00093.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
Length = 736
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/340 (48%), Positives = 227/340 (66%), Gaps = 9/340 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R Q+ II VL +DVLVIM GGGKSLCYQLPA+LR G+ +VVSPL++L+
Sbjct: 19 HFFGYDDFRHYQRAIIEQVLKNQDVLVIMPTGGGKSLCYQLPALLRLGVTIVVSPLIALM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L GI A L S+ + + + +AL +G+ +K+LY+ PE++ F L
Sbjct: 79 QDQVRSLEDNGIAATFLNSSLTFNEVRDREQALLRGD--IKLLYLAPERLMNPS-FWPLL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E+ LS +IDEAHC S+WGHDFRP+Y+ L LK QFP VP+MALTATAT++V+ D
Sbjct: 136 EQIQQTVGLSAFAIDEAHCVSEWGHDFRPEYRQLFQLKQQFPQVPVMALTATATERVRQD 195
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L + FVS NR NL+Y V K+ K D + K +++ S +GI+YC S
Sbjct: 196 IIQQLRLNDPQVFVSGFNRQNLYYEVTPKT---KQSYDHLLKLVKQ---QSGAGIIYCLS 249
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK ++A L+Q GISA YHA + R+ ++ ++ +++IV T+AFGMGINKPDV
Sbjct: 250 RKRVNEIAFRLKQDGISALPYHAGLSAKERQGNQEQFIRDDVRIIVATIAFGMGINKPDV 309
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFVIH+ L +++E+YYQESGRAGRDG P+ C +FF ADV
Sbjct: 310 RFVIHYDLPRTIESYYQESGRAGRDGDPANCTVFFSYADV 349
>gi|161486779|ref|NP_807007.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|161501914|ref|NP_457793.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|417337681|ref|ZP_12119750.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
gi|417471048|ref|ZP_12167106.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|353563828|gb|EHC30067.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
gi|353623757|gb|EHC72954.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
Length = 614
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 15 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 74
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 75 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 132
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 133 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 187
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 188 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 241
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 242 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 301
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 302 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 350
>gi|416894183|ref|ZP_11924993.1| ATP-dependent DNA helicase [Aggregatibacter aphrophilus ATCC 33389]
gi|347813652|gb|EGY30318.1| ATP-dependent DNA helicase [Aggregatibacter aphrophilus ATCC 33389]
Length = 630
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/344 (48%), Positives = 233/344 (67%), Gaps = 15/344 (4%)
Query: 81 DVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPL 140
DV +VFG ++R QQEII+A LSG+D LVIMA G GKSLCYQ+PA+ +G+ LVVSPL
Sbjct: 34 DVLHSVFGYQSFRKGQQEIIHAALSGQDCLVIMATGTGKSLCYQIPALCFDGMTLVVSPL 93
Query: 141 LSLIQDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKR 199
+SL++DQV L GI A L ST T +E ++ +A+ G+LK+LY++PEK+ +
Sbjct: 94 ISLMKDQVDQLRTNGIEADYLNSTQTFEEQQQVQNRAIS---GQLKLLYLSPEKV-MTNS 149
Query: 200 FMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQ 259
F + C+ +S I+IDEAHC SQWGHDFRP+Y LG LK FP VP+MALTATA Q
Sbjct: 150 FFQFISHCN----VSFIAIDEAHCISQWGHDFRPEYTQLGGLKGCFPKVPIMALTATADQ 205
Query: 260 KVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGI 319
Q D+++ L + + V + +RPN+ Y + EK ++++ +++ +SGI
Sbjct: 206 TTQQDILQNLRLNRPHFHVGSFDRPNIRYTLVEKFKP----MEQLCRFVLAQ--KGKSGI 259
Query: 320 VYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
VYC SR + E++A+ L +G+ A YHA M+ REKV + ++ +QV+V T+AFGMGI
Sbjct: 260 VYCNSRNKVERIAETLCNKGVRAAAYHAGMENTLREKVQRDFQRDNIQVVVATIAFGMGI 319
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
NK +VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 320 NKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 363
>gi|204930202|ref|ZP_03221179.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204320606|gb|EDZ05808.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
Length = 615
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|261250050|ref|ZP_05942627.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260939554|gb|EEX95539.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 602
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 237/355 (66%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
NVFG +R QQE+I + ++G+D LVIM GGGKSLCYQ+PA++R G+ LV+SPL+SL+
Sbjct: 13 NVFGYQIFRDGQQEVIESAVAGQDSLVIMPTGGGKSLCYQIPALVRSGLTLVISPLISLM 72
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST S+E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 73 KDQVDQLKANGVAAECINSTMSREELISVYNRMHSGA--LKLVYVSPERVLM-RDFIERL 129
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP+MALTATA + D
Sbjct: 130 ESLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPVMALTATADDATRKD 185
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+M+ L + + ++ + +RPN+ Y + EK + ++ ++++ GI+YC S
Sbjct: 186 IMQRLQLNEPHTYLGSFDRPNIRYTLVEKHKP----VSQVVRFLENQ--RGSCGIIYCGS 239
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L G+ A YHA ++ + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 240 RKKVEMVTEKLCNNGLRAASYHAGLEADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 299
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 300 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 354
>gi|440289627|ref|YP_007342392.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
strain FGI 57]
gi|440049149|gb|AGB80207.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
strain FGI 57]
Length = 609
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/349 (44%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQENIIDTVLEGRDCLVVMPTGGGKSLCYQIPALVLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A + ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLIANGVAAACINSTQSREQQQEVMAGCRSGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + ++++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-MLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRRDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA +D R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAGAYHAGLDNAVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|15603292|ref|NP_246366.1| RecQ protein [Pasteurella multocida subsp. multocida str. Pm70]
gi|18202817|sp|Q9CL21.1|RECQ_PASMU RecName: Full=ATP-dependent DNA helicase RecQ
gi|12721804|gb|AAK03511.1| RecQ [Pasteurella multocida subsp. multocida str. Pm70]
Length = 632
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 234/345 (67%), Gaps = 13/345 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A DV VFG ++R Q+E+I+A L G+D LVIMA G GKSLCYQ+PA+ EG+ LV+S
Sbjct: 26 ALDVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVIS 85
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A GI A L S+ + +++ + L G LK+LYV+PEK+ +
Sbjct: 86 PLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLM--SGTLKLLYVSPEKVMTTS 143
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F + C ++S ++IDEAHC SQWGHDFRP+Y LG LK+ FP P+MALTATA
Sbjct: 144 -FFHLISHC----KVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATAD 198
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L+++ ++ + +RPN+ Y + EK ++++ +++ +SG
Sbjct: 199 HATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKP----MEQLCRFVLGQ--KGKSG 252
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E++A+ LR +G+SA YHA ++ + RE+V + ++ +QV+V T+AFGMG
Sbjct: 253 IIYCNSRSKVERIAESLRNKGVSAQAYHAGLETSQREQVQRAFQRDNVQVVVATIAFGMG 312
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
INK +VRFV+H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 313 INKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 357
>gi|403223910|dbj|BAM42040.1| DNA helicase [Theileria orientalis strain Shintoku]
Length = 931
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/361 (44%), Positives = 225/361 (62%), Gaps = 9/361 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F + + +++ NVFG ++R Q IN++L G D V+MA G GKS CYQLP++L G
Sbjct: 221 FPFSQKVNEINRNVFGFESFRGVQLAAINSLLLGMDCFVLMATGVGKSHCYQLPSLLLNG 280
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGEL---KMLYV 189
+V SPLLSL+ DQ+ L A GI A L + T+ + + I K+L E +L++
Sbjct: 281 TVVVFSPLLSLVDDQMHSLKAHGIEAQTLNAKTTMPEFRAISKSLTDRHREYLNGSILFI 340
Query: 190 TPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVP 249
TPEK KSK +S L+ + RL L IDEAHC SQWGH FR DY+ LG LK FP VP
Sbjct: 341 TPEKFDKSKSVLSLLKTMYEMDRLKLFVIDEAHCVSQWGHSFRKDYRKLGNLKNNFPTVP 400
Query: 250 MMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQ 309
++A+TATAT V D+ +L + KC+ ++TINRPNL+ VREK+ K +DE+ + +
Sbjct: 401 ILAVTATATPDVIVDITGVLRMSKCVTLITTINRPNLWLEVREKT---KNYMDEVLQILM 457
Query: 310 ESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVI 369
+ + GIVYC + +C++VA+++ GIS YHA MD+ R + W +++I
Sbjct: 458 ST---TGCGIVYCLTTSDCDKVAEKIYSHGISVSVYHAKMDLEDRTRSQKLWKSGDVRII 514
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSS 429
V TVAFGMGI+KPDVR ++H S S+ +YYQE GRAGRDG S +L+F P D R +
Sbjct: 515 VATVAFGMGIDKPDVRLILHTSAPTSILSYYQEIGRAGRDGKFSTTILWFSPRDFERHKN 574
Query: 430 M 430
+
Sbjct: 575 I 575
>gi|168233892|ref|ZP_02658950.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|416427302|ref|ZP_11693481.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416434870|ref|ZP_11697891.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416436865|ref|ZP_11698533.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416447482|ref|ZP_11705890.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416454710|ref|ZP_11710431.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416457489|ref|ZP_11712204.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416464152|ref|ZP_11716248.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416475377|ref|ZP_11720600.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416489276|ref|ZP_11726106.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416496572|ref|ZP_11729198.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416507871|ref|ZP_11735697.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416517693|ref|ZP_11739594.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416547105|ref|ZP_11754394.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416562017|ref|ZP_11761863.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416572797|ref|ZP_11767461.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416574873|ref|ZP_11768042.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416587458|ref|ZP_11776068.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416594725|ref|ZP_11780542.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416596084|ref|ZP_11781178.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416606167|ref|ZP_11787562.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416613349|ref|ZP_11791983.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416624004|ref|ZP_11797748.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416634922|ref|ZP_11802814.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416639346|ref|ZP_11804480.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416660772|ref|ZP_11815207.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416668613|ref|ZP_11819000.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416678400|ref|ZP_11822627.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416689502|ref|ZP_11825608.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416704588|ref|ZP_11830342.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416710675|ref|ZP_11834703.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416717787|ref|ZP_11840028.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416723406|ref|ZP_11844118.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416728964|ref|ZP_11847700.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416742430|ref|ZP_11855812.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416748208|ref|ZP_11858599.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416759473|ref|ZP_11864304.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416764210|ref|ZP_11867845.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416772766|ref|ZP_11873465.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418486071|ref|ZP_13055045.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418507163|ref|ZP_13073488.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|205332102|gb|EDZ18866.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|322613033|gb|EFY09984.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617379|gb|EFY14279.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625629|gb|EFY22451.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627052|gb|EFY23845.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631232|gb|EFY27995.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638265|gb|EFY34964.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642799|gb|EFY39386.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646959|gb|EFY43461.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650346|gb|EFY46759.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656363|gb|EFY52657.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657588|gb|EFY53858.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322665999|gb|EFY62180.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666738|gb|EFY62915.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671019|gb|EFY67149.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322679274|gb|EFY75326.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681678|gb|EFY77705.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685995|gb|EFY81983.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192621|gb|EFZ77849.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196487|gb|EFZ81637.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203761|gb|EFZ88782.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323210733|gb|EFZ95609.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215901|gb|EGA00634.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221394|gb|EGA05812.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323227588|gb|EGA11744.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231773|gb|EGA15884.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236188|gb|EGA20265.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239575|gb|EGA23623.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244329|gb|EGA28337.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249574|gb|EGA33486.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250334|gb|EGA34220.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256541|gb|EGA40272.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259761|gb|EGA43394.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265169|gb|EGA48667.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323268402|gb|EGA51874.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|363553085|gb|EHL37357.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363559660|gb|EHL43813.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363572666|gb|EHL56556.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|363573470|gb|EHL57350.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|366054404|gb|EHN18759.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366081731|gb|EHN45672.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
Length = 615
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|254413079|ref|ZP_05026851.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
gi|196180243|gb|EDX75235.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
Length = 731
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 234/351 (66%), Gaps = 9/351 (2%)
Query: 81 DVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPL 140
D FG +R QQ+I+ L RD+L+IM GGGKSLC+QLPA+L+ G+ +VVSPL
Sbjct: 31 DALKQFFGYTTFRPGQQQIVEEALQNRDLLIIMPTGGGKSLCFQLPALLKPGLTVVVSPL 90
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
++L+QDQV L GI A L ST S + + + + G++K+LYV PE++ ++RF
Sbjct: 91 IALMQDQVDALVDNGIGATFLNSTLSWDAVR--SREMAILNGKIKLLYVAPERLL-AERF 147
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
LE+ +S ++DEAHC S WGHDFRP+Y+ + L+ ++PD+P++ALTATAT++
Sbjct: 148 APFLEQVRSQVGISAFAVDEAHCVSAWGHDFRPEYRQIKQLRQRYPDIPILALTATATKR 207
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
VQ D+++ L +R+ +++ NRPNL+Y ++ K + +++ K +Q + SGI+
Sbjct: 208 VQQDIVQQLTLRQPSIHIASFNRPNLYYEIQPKQ---RQSYNQLFKKVQS---HKGSGII 261
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC SR+ ++VA L++ GISA YHA M R R+ ++ +QVIV T+AFGMGIN
Sbjct: 262 YCLSRRSVDEVAFRLQKDGISALPYHAGMSDIDRSSNQNRFIRDDVQVIVATIAFGMGIN 321
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
K DVRFVIH+ L +++E YYQESGRAGRDG P+ C +F+RP DVPR ++
Sbjct: 322 KLDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAYCTIFYRPGDVPRLDYLI 372
>gi|375258339|ref|YP_005017509.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca KCTC 1686]
gi|402839822|ref|ZP_10888300.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. OBRC7]
gi|423105828|ref|ZP_17093529.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5242]
gi|365907817|gb|AEX03270.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca KCTC 1686]
gi|376379689|gb|EHS92440.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5242]
gi|402287439|gb|EJU35887.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. OBRC7]
Length = 608
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ L+GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + LS++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLTHWN----LSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPQIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLDLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|397655279|ref|YP_006495981.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca E718]
gi|394344006|gb|AFN30127.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca E718]
Length = 608
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ L+GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQDVMAGCRSGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + LS++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLTHWN----LSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPQIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLDLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|359434605|ref|ZP_09224868.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20652]
gi|357918814|dbj|GAA61117.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20652]
Length = 607
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 240/341 (70%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q+ +I+A ++G+D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 22 VFGYSEFRDGQKTVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G++K+LYV PEK+ + + F+ +L
Sbjct: 82 DQVTQLQALGVKAAYVNNSLAREEQQLVYQQLH--QGQIKLLYVAPEKVLQ-REFLERLS 138
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 139 HLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRFDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E S+SGI+YC SR
Sbjct: 195 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KSQSGIIYCTSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A+++ G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 249 KRVDDIAEKIADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E+YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 309 FVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGR 349
>gi|213162090|ref|ZP_03347800.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
Length = 431
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|409404383|ref|ZP_11252862.1| ATP-dependent DNA helicase [Herbaspirillum sp. GW103]
gi|386435902|gb|EIJ48725.1| ATP-dependent DNA helicase [Herbaspirillum sp. GW103]
Length = 617
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/354 (47%), Positives = 235/354 (66%), Gaps = 12/354 (3%)
Query: 78 RADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVV 137
RA V VFG ++R +Q EI+ V G D LV+M GGGKSLCYQ+PA+LR G +VV
Sbjct: 16 RALHVLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLRAGTGVVV 75
Query: 138 SPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKS 197
SPL++L+QDQV LA +G+ A L ST S ++ I + L +G+L +LYV PE++ +
Sbjct: 76 SPLIALMQDQVDALAEVGVRAAFLNSTQSFDEALQIERRLR--QGDLDLLYVAPERL-MT 132
Query: 198 KRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATA 257
R + LE + R+SL +IDEAHC SQWGHDFRP+Y L IL +FP VP +ALTATA
Sbjct: 133 PRCLELLE----SARISLFAIDEAHCVSQWGHDFRPEYIKLSILHERFPQVPRIALTATA 188
Query: 258 TQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSES 317
Q+ + +++ L + +FVS+ +RPN+ Y + EK++ K ++D +I+ +P+ ++
Sbjct: 189 DQQTREEIIHRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLD----FIKSEHPD-DA 243
Query: 318 GIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGM 377
GIVYC SRK+ E+ A+ LR G++A YHA MD R + R+ + V+V T+AFGM
Sbjct: 244 GIVYCLSRKKVEETAEFLRGEGLNALAYHAGMDYALRTRNQARFLREDKIVMVATIAFGM 303
Query: 378 GINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
GI+KPDVRFV H L KSVE YYQE+GRAGRDGLP++ + + DV +Q M+
Sbjct: 304 GIDKPDVRFVCHLDLPKSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMI 357
>gi|417955149|ref|ZP_12598172.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342813701|gb|EGU48661.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 612
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 237/355 (66%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
NVFG +R QQE+I + ++G+D LVIM GGGKSLCYQ+PA++R G+ LV+SPL+SL+
Sbjct: 23 NVFGYQIFRDGQQEVIESAVAGQDSLVIMPTGGGKSLCYQIPALVRSGLTLVISPLISLM 82
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST S+E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 83 KDQVDQLKANGVAAECINSTMSREELISVYNRMHSGA--LKLVYVSPERVLM-RDFIERL 139
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP+MALTATA + D
Sbjct: 140 ESLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPVMALTATADDATRKD 195
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+M+ L + + ++ + +RPN+ Y + EK + ++ ++++ GI+YC S
Sbjct: 196 IMQRLQLNEPHTYLGSFDRPNIRYTLVEKHKP----VSQVVRFLENQ--RGSCGIIYCGS 249
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L G+ A YHA ++ + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 250 RKKVEMVTEKLCNNGLRAASYHAGLEADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 309
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 310 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 364
>gi|200386748|ref|ZP_03213360.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205358016|ref|ZP_02574990.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|419729880|ref|ZP_14256835.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419733429|ref|ZP_14260327.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419739272|ref|ZP_14266022.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419744302|ref|ZP_14270957.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419747546|ref|ZP_14274055.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421568554|ref|ZP_16014270.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421573152|ref|ZP_16018793.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421577825|ref|ZP_16023409.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421585417|ref|ZP_16030915.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422028195|ref|ZP_16374511.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422033246|ref|ZP_16379328.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427556417|ref|ZP_18929834.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427573922|ref|ZP_18934425.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427595457|ref|ZP_18939339.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427620224|ref|ZP_18944221.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427643553|ref|ZP_18949109.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427658213|ref|ZP_18953833.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427663471|ref|ZP_18958735.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427680435|ref|ZP_18963628.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427801523|ref|ZP_18969078.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|19859341|sp|P40724.3|RECQ_SALTY RecName: Full=ATP-dependent DNA helicase RecQ
gi|199603846|gb|EDZ02391.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205328138|gb|EDZ14902.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|381295573|gb|EIC36683.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381299619|gb|EIC40690.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381300148|gb|EIC41212.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381309157|gb|EIC49998.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381316946|gb|EIC57683.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|402526073|gb|EJW33352.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402529061|gb|EJW36309.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402529843|gb|EJW37071.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402530062|gb|EJW37285.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414012332|gb|EKS96254.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414013685|gb|EKS97561.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414013736|gb|EKS97610.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414027502|gb|EKT10730.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414028451|gb|EKT11639.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414030693|gb|EKT13785.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414041738|gb|EKT24296.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414042549|gb|EKT25086.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414046946|gb|EKT29251.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414055658|gb|EKT37543.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414061964|gb|EKT43335.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 609
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|33151690|ref|NP_873043.1| ATP-dependent DNA helicase [Haemophilus ducreyi 35000HP]
gi|33147911|gb|AAP95432.1| ATP-dependent DNA helicase [Haemophilus ducreyi 35000HP]
Length = 601
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/351 (46%), Positives = 237/351 (67%), Gaps = 15/351 (4%)
Query: 74 EWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGI 133
E S+A DV N+FG +R QQE+I AVL+G+D LVIM GGGKSLCYQ+PA+ EGI
Sbjct: 3 ELFSKAKDVLNNIFGYQHFRNGQQEVIEAVLTGQDCLVIMTTGGGKSLCYQVPALCLEGI 62
Query: 134 ALVVSPLLSLIQDQVMCLAALGIPA-HMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPE 192
LV+SPL+SL++DQV L GI A ++ S T +E ++ KAL G+LK+LY++PE
Sbjct: 63 TLVISPLISLMKDQVDQLLTYGIEAGYINCSQTFEEQQRVEQKALS---GQLKLLYLSPE 119
Query: 193 KISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMA 252
K+ ++ F S + C ++SLI +DEAHC SQWGHDFRP+Y LG L+ F +P+MA
Sbjct: 120 KV-MTQAFFSFIFHC----KISLIVVDEAHCVSQWGHDFRPEYALLGRLRKTFVGIPLMA 174
Query: 253 LTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESY 312
LTATA + D+++ L + ++ + +RPN+ Y V++K ++++ ++I
Sbjct: 175 LTATADPTTRKDILQHLCLTNPYTYLGSFDRPNIRYTVQQKFKP----LEQLTQFILRQ- 229
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
+SGI+YC SRK+ E+++++L R IS YHA M + RE V + ++ +Q++V T
Sbjct: 230 -QGKSGIIYCNSRKKVEEISEKLAARKISVMGYHAGMPVQQREMVQEAFQRDNIQIVVAT 288
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
+AFGMGINK +VRFV+H L +S+E YYQE+GRAGRD LPSE +LF+ P+D
Sbjct: 289 IAFGMGINKSNVRFVVHFDLPRSIEAYYQETGRAGRDDLPSEAVLFYNPSD 339
>gi|392533361|ref|ZP_10280498.1| ATP-dependent DNA helicase [Pseudoalteromonas arctica A 37-1-2]
Length = 607
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 240/341 (70%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q+ +I+A ++G+D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 22 VFGYSEFRDGQKTVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G++K+LYV PEK+ + + F+ +L
Sbjct: 82 DQVSQLQALGVKAAYVNNSLAREEQQLVYQQLH--QGQIKLLYVAPEKVLQ-REFLERLS 138
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 139 HLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRFDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E S+SGI+YC SR
Sbjct: 195 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KSQSGIIYCTSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A+++ G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 249 KRVDDIAEKIADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E+YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 309 FVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGR 349
>gi|359441917|ref|ZP_09231801.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20429]
gi|358036178|dbj|GAA68050.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20429]
Length = 596
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 240/341 (70%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q+ +I+A ++G+D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 11 VFGYSEFRDGQKTVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 70
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G++K+LYV PEK+ + + F+ +L
Sbjct: 71 DQVSQLQALGVKAAYVNNSLAREEQQLVYQQLH--QGQIKLLYVAPEKVLQ-REFLERLS 127
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 128 HLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRFDI 183
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E S+SGI+YC SR
Sbjct: 184 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KSQSGIIYCTSR 237
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A+++ G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 238 KRVDDIAEKIADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 297
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E+YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 298 FVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGR 338
>gi|417840674|ref|ZP_12486783.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M19501]
gi|341950862|gb|EGT77444.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M19501]
Length = 615
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 230/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ EG+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFEGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+ LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQ--LKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++S I+IDEAHC SQWGHDFRP+Y LG LK FPD P+MALTATA + D
Sbjct: 136 -QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATRQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L++ K++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILSHLNLENPHKYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ L +G+SA YHA M+ R++V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLCNKGVSAAAYHAGMETARRDRVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347
>gi|300714809|ref|YP_003739612.1| ATP-dependent DNA helicase [Erwinia billingiae Eb661]
gi|299060645|emb|CAX57752.1| ATP-dependent DNA helicase [Erwinia billingiae Eb661]
Length = 608
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/362 (44%), Positives = 238/362 (65%), Gaps = 19/362 (5%)
Query: 63 STAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
STAV N ++ A+ V FG +R QQ II A L+GRD LV+M GGGKSLC
Sbjct: 2 STAVINQ------EALAEQVLQETFGYQHFRPGQQSIIQASLNGRDCLVVMPTGGGKSLC 55
Query: 123 YQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEG 182
YQ+PA++REG+ LVVSPL+SL++DQV L A G+ A L ST ++E+++ + G+
Sbjct: 56 YQIPALVREGLTLVVSPLISLMKDQVDQLLANGVSAACLNSTQTREEQQEVMAGCRTGK- 114
Query: 183 ELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
+++LY+ PE++ F+ L + A ++++DEAHC SQWGHDFRP+Y LG L+
Sbjct: 115 -VRLLYIAPERLMMDN-FLDNLLHWNPA----MLAVDEAHCISQWGHDFRPEYGALGQLR 168
Query: 243 TQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVID 302
+ PDVP+MALTATA + +ND+ +L + + +S+ +RPN+ Y + EK +
Sbjct: 169 QRLPDVPVMALTATADETTRNDIARLLQLDDPLIQISSFDRPNIRYTLVEKFKP----TE 224
Query: 303 EIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWS 362
++ +Y+Q+ + GI+YC SR + E A L+ RG+S YHA MD R +V +
Sbjct: 225 QLLRYVQDQ--RGKCGIIYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNAHRAQVQEAFQ 282
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
++ LQ++V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E L+ + PA
Sbjct: 283 RDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALMLYDPA 342
Query: 423 DV 424
D+
Sbjct: 343 DM 344
>gi|423126736|ref|ZP_17114415.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5250]
gi|376396730|gb|EHT09369.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5250]
Length = 608
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ L+GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQDVMAGCRSGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + LS++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLTHWN----LSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPHIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLDLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|302692420|ref|XP_003035889.1| hypothetical protein SCHCODRAFT_50616 [Schizophyllum commune H4-8]
gi|300109585|gb|EFJ00987.1| hypothetical protein SCHCODRAFT_50616, partial [Schizophyllum
commune H4-8]
Length = 474
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 219/342 (64%), Gaps = 10/342 (2%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLLS 142
F + +R NQ + I A + G+DV V+M GGGKSLCYQLPA+ +G+ ++VSPLL+
Sbjct: 44 FRLQTFRKNQLQAITATMEGKDVFVLMPTGGGKSLCYQLPAICEGGSTKGVTIIVSPLLA 103
Query: 143 LIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
L++DQV L GI A TS +++ ++LYVTPEK+ S + S
Sbjct: 104 LMEDQVENLTRRGIEALQWTSADARDTPSLDVNRRMYSNNRPRLLYVTPEKMHNSGQAKS 163
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L H G ++ IDEAHC S WGHDFR Y LG L+ +P VP+MALTATAT +
Sbjct: 164 LLSYLHGRGLIARFVIDEAHCISSWGHDFRSAYLALGQLRQTYPGVPIMALTATATPRAA 223
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
+D+++ L I +C++ + NR NL Y V V K + IAK+I E++P ESGI+Y
Sbjct: 224 DDIVKNLRIERCVRLTQSFNRTNLHYSV-----VPKQKMSTIAKWINETHP-GESGIIYT 277
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
S+K E A++LR+ G+SA+YYHA M R+ V+M W N+ QV+V T+AFGMGI+K
Sbjct: 278 LSKKNAEVGAEQLRKEGVSAEYYHAGMTDEDRKTVYMNWKSNRTQVMVATIAFGMGIDKA 337
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
DVRFVIHHS+ KS++ YYQE+GRAGRDG PS+C+L ++ D
Sbjct: 338 DVRFVIHHSIPKSLDGYYQETGRAGRDGQPSDCVLHYQYKDA 379
>gi|152972806|ref|YP_001337952.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|329997483|ref|ZP_08302785.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. MS 92-3]
gi|449059651|ref|ZP_21737339.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae hvKP1]
gi|150957655|gb|ABR79685.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|328539051|gb|EGF65090.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. MS 92-3]
gi|448874669|gb|EMB09708.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae hvKP1]
Length = 608
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II L GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--VRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R +V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|440297665|gb|ELP90322.1| ATP-dependent RNA helicase DBP3, putative [Entamoeba invadens IP1]
Length = 809
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/434 (39%), Positives = 257/434 (59%), Gaps = 16/434 (3%)
Query: 5 EILQELENVEAEVRLVQEQ-------IKQLVDRQDQLYE-RQSELKSLLEAFEASRGSPI 56
+I + E V +R+++E+ + +L D+ ++Y + E KS E F+ P
Sbjct: 265 QIAYDREEVRRSIRVIEERKGIKIKDVLRLNDKIGRIYAWKAEEAKSSYEPFKKHDKIPE 324
Query: 57 QYGGSS----STAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVI 112
++ S W G F+W + + V VF + R Q +IN +L+G +VLV+
Sbjct: 325 TVQSTNRYYYSIYTNWWGGEFKWRDKVNQVLNGVFHHKSLRLLQYPVINCILAGHNVLVL 384
Query: 113 MAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKF 172
M GGGKSLCYQLP + ++G LVVSPL+SL+QDQV L +GI A + ++ S ++ K
Sbjct: 385 MPTGGGKSLCYQLPMLFKDGYTLVVSPLISLMQDQVKALNNIGIQA-ITCNSNSPQNMKL 443
Query: 173 IYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFR 232
+ + + +++YV PE + S F+S +++ + G S + IDE HC SQWGHDFR
Sbjct: 444 FEEDVRFNRRKYRVVYVAPELLDMSSNFISLMKQINEKGLFSYLVIDEVHCVSQWGHDFR 503
Query: 233 PDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVRE 292
Y L + +FP V + TATAT++V+ND++ L + + + F T NR NL Y ++
Sbjct: 504 ESYVKLRDFRKKFPSVQTIMFTATATERVKNDVLISLGLEEALVFNQTFNRVNLTYQIKY 563
Query: 293 KSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDIN 352
KSS + V D I +YI+E + GIV+CFSRK+CE++ + L+ I ++YYHA M
Sbjct: 564 KSSQDQCVTD-IIQYIKEHA--GQCGIVFCFSRKDCEKMDESLKSSKIKSEYYHAGMKAE 620
Query: 353 AREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLP 412
R+ + W K V+ TVAFGMGI+K DVRFVIH ++ SVE ++QESGRAGRDG P
Sbjct: 621 ERKSIQDGWMKGTYDVVCATVAFGMGIDKADVRFVIHQTMPSSVEQFFQESGRAGRDGKP 680
Query: 413 SECLLFFRPADVPR 426
SEC++++ DV +
Sbjct: 681 SECIVYYSQVDVKK 694
>gi|448524540|ref|XP_003871523.1| Sgs1 RecQ-related DNA helicase [Candida orthopsilosis Co 90-125]
gi|380353345|emb|CCG26101.1| Sgs1 RecQ-related DNA helicase [Candida orthopsilosis]
Length = 1068
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 287/529 (54%), Gaps = 66/529 (12%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLL 141
VF + ++R NQ E + A L +DV V+M GGGKSLCYQLPA+++ +G +V+SPL+
Sbjct: 548 VFKLQSFRPNQLEAVIASLLNKDVFVLMPTGGGKSLCYQLPALIKGGHSKGTTVVISPLI 607
Query: 142 SLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFM 201
SL+QDQV L I A M++S + +D K EG L ++Y++PEK +KS
Sbjct: 608 SLMQDQVQHLIHKNIKAGMISSKANSDDNKHTLNLFR--EGFLDIVYLSPEKANKSTMIQ 665
Query: 202 SKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKV 261
+ K + +L+ + IDEAHC S WGHDFRPDYK +G K +FP VP+MALTATA +KV
Sbjct: 666 KIIGKLYDRNQLARVVIDEAHCLSSWGHDFRPDYKGMGFFKERFPAVPIMALTATANEKV 725
Query: 262 QNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVY 321
+ D++ L + + + NR NL+Y +R KS ++ + YI Y N + GI+Y
Sbjct: 726 RMDIVHHLKMNSPVYLKQSFNRTNLYYEIRWKSGN---YLESMKDYILSRYKN-KCGIIY 781
Query: 322 CFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINK 381
C S++ CEQ + +L G+ +YHA M R K+ W KNK+Q+I T+AFGMGI+K
Sbjct: 782 CHSKQSCEQTSAKLNSFGLKTSFYHAGMTPEDRFKIQTNWQKNKIQLICATIAFGMGIDK 841
Query: 382 PDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYE------- 434
PDVRFVIH + +S+E YYQE+GRAGRDG PSEC++++ D +M+ +
Sbjct: 842 PDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMYYCYKDARSLQNMIHRDADLTEEG 901
Query: 435 -NSGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNL---------FCMVVL-----A 479
+ L L +V+Y + ++V E +N + V +
Sbjct: 902 KENHLAKLRQVVQYCENTTDCRRKQVLHYFNETFNPINCKKQCDNCKNYNHVTVVEKDCT 961
Query: 480 GHAQCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEID-------------SDLKREEIE 525
+AQ I+ L++ IQ N+++T+L D K +K +I +L + ++E
Sbjct: 962 QYAQDILKLVKSIQ--NEKVTVLHCQDVFKGLKYNKITKMGHNNNPYHAKGKNLDKTDVE 1019
Query: 526 QLVLQLIIDRVLVRI----GPFSP--------------GKKIIKLEISS 556
++ L+ + LV G F+ G K IK++ SS
Sbjct: 1020 RIFFYLLSEECLVEYQVMKGGFASNYVRVGRNASKVLNGNKTIKIQFSS 1068
>gi|417392279|ref|ZP_12155173.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353612508|gb|EHC64868.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
Length = 603
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 4 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 63
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 64 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--VRLLYIAPERLM 121
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 122 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 176
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 177 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 230
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 231 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 290
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 291 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 339
>gi|218130244|ref|ZP_03459048.1| hypothetical protein BACEGG_01832 [Bacteroides eggerthii DSM 20697]
gi|217987528|gb|EEC53856.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 604
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/369 (45%), Positives = 243/369 (65%), Gaps = 21/369 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R Q+EII +L G D LV+M GGGKS+CYQLPA+LREG A+VVSPL+SL++D
Sbjct: 9 FGYDSFRPLQEEIIRHILGGNDALVLMPTGGGKSICYQLPALLREGTAVVVSPLISLMKD 68
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L A GI A L S+ + + + +A EG+LK+LY++PEK+ ++ L
Sbjct: 69 QVEALCANGISAGALNSSNDETENAALRRACM--EGKLKLLYISPEKLLAEANYL--LRD 124
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H +SL +IDEAHC SQWGHDFRP+Y +GIL QFP VP++ALTATA + + D++
Sbjct: 125 MH----VSLFAIDEAHCISQWGHDFRPEYAQMGILHQQFPQVPVIALTATADKITREDII 180
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVR---EKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
+ LH+ F+S+ +RPNL V+ ++ K +ID IA++ ESGI+YC
Sbjct: 181 KQLHLNHPRIFISSFDRPNLSLTVKRGYQQKEKSKAIIDFIARH------PGESGIIYCM 234
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SR + E VAQ L+++GI A YHA + R++ + +++QV+ T+AFGMGI+K +
Sbjct: 235 SRSKTESVAQMLQKQGIRAAVYHAGLSPTRRDEAQDDFINDRVQVVCATIAFGMGIDKSN 294
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ--NL 441
VR+VIH++L KS+E++YQE GRAGRDG+PS+ LLF+ +D+ + F +SG Q N+
Sbjct: 295 VRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLSDLILLTK--FATDSGQQSINI 352
Query: 442 YDIVRYSQY 450
+ R QY
Sbjct: 353 EKLQRMQQY 361
>gi|59710677|ref|YP_203453.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri ES114]
gi|59478778|gb|AAW84565.1| ATP-dependent DNA helicase [Vibrio fischeri ES114]
Length = 611
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 239/357 (66%), Gaps = 13/357 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R Q+E+INAVL +D LVIM GGGKSLCYQ+PA++ EG+ LV+SPL+SL+
Sbjct: 22 DVFGYQEFRVGQEEVINAVLDSKDCLVIMPTGGGKSLCYQIPALVFEGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST +E++ I+ + G++KMLYV+PE++ + FM +L
Sbjct: 82 KDQVDQLKANGVKAECLNSTIEREEQIAIWNRV--NSGQVKMLYVSPERVMM-RDFMDRL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E + L +I++DEAHC SQWGHDFRP+Y +LG +K +FP VP+MALTATA + + D
Sbjct: 139 ESLN----LCMIAVDEAHCISQWGHDFRPEYASLGQIKQRFPSVPIMALTATADEATRKD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + + +++ + +RPN+ Y V EK + +I +Y+ ++ G++YC S
Sbjct: 195 ILHRLSLPEPHQYLGSFDRPNIRYTVLEKHKP----VSQIVRYLATQ--KNQCGVIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E + ++L I A YHA +D++ R V + ++ +Q++V TVAFGMGINK +V
Sbjct: 249 RKKVEMLTEKLCNNHIRAASYHAGLDLDERNYVQEAFQRDDIQIVVATVAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNL 441
RFV H + K++E+YYQE+GRAGRDGLP+E ++ + PAD+ +V + G Q L
Sbjct: 309 RFVAHFDIPKNIESYYQETGRAGRDGLPAEAVMLYDPADIVWLRKLVEEKPEGPQKL 365
>gi|261823379|ref|YP_003261485.1| ATP-dependent DNA helicase RecQ [Pectobacterium wasabiae WPP163]
gi|261607392|gb|ACX89878.1| ATP-dependent DNA helicase RecQ [Pectobacterium wasabiae WPP163]
gi|385873847|gb|AFI92367.1| ATP-dependent DNA helicase RecQ [Pectobacterium sp. SCC3193]
Length = 608
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 233/340 (68%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEII+A LSG+D LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST ++E + + G+ +K+LY+ PE+++ + F+ L
Sbjct: 79 KDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTGQ--IKLLYIAPERLT-TDSFLDHL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
++SLI++DEAHC SQWGHDFRP+Y+ LG +K +FP +P +ALTATA + +ND
Sbjct: 136 AHW----QISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRND 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L ++ + +S+ +RPN+ Y + EK +D++ ++Q +SGI+YC S
Sbjct: 192 IVRLLDLQSPLIQISSFDRPNIRYTLVEKFKP----LDQLWMFVQGQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R E ++ L+ RG+SA YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RSRVEDISARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGL +E LF+ PAD+
Sbjct: 306 RFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADM 345
>gi|417854228|ref|ZP_12499548.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|338218289|gb|EGP04066.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_goat]
Length = 632
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 233/345 (67%), Gaps = 13/345 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A DV VFG ++R Q+E+I+A L G+D LVIMA G GKSLCYQ+PA+ EG+ LV+S
Sbjct: 26 ALDVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVIS 85
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A GI A L S+ + +++ + L G LK+LYV+PEK+ +
Sbjct: 86 PLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLM--SGTLKLLYVSPEKVMTTS 143
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F + C ++S ++IDEAHC SQWGHDFRP+Y LG LK+ FP P+MALTATA
Sbjct: 144 -FFHLISHC----KVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATAD 198
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L+++ ++ + +RPN+ Y + EK ++++ +++ +SG
Sbjct: 199 HATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKP----MEQLCRFVLGQ--KGKSG 252
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E++A+ LR +G+SA YHA ++ RE+V + ++ +QV+V T+AFGMG
Sbjct: 253 IIYCNSRSKVERIAESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMG 312
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
INK +VRFV+H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 313 INKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 357
>gi|423111286|ref|ZP_17098981.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5243]
gi|423117298|ref|ZP_17104989.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5245]
gi|376376415|gb|EHS89194.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5245]
gi|376377058|gb|EHS89832.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5243]
Length = 608
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 233/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ L+GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + LS++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLTHWN----LSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPQIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLGLSDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|417361770|ref|ZP_12135584.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|353583121|gb|EHC43574.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
Length = 609
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 227/339 (66%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +VVSPL+SL++
Sbjct: 20 TFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMK 79
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A L ST S+E + + G+ +++LY+ PE++ F+ L
Sbjct: 80 DQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLMLDN-FLDHLA 136
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTATA + D+
Sbjct: 137 HWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQDI 192
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SGI+YC SR
Sbjct: 193 IRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSGIIYCNSR 246
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAFGMGINKP+VR
Sbjct: 247 AKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGINKPNVR 306
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 307 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|16767228|ref|NP_462843.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|168244648|ref|ZP_02669580.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194447354|ref|YP_002047969.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|374979455|ref|ZP_09720791.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|378447302|ref|YP_005234934.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378452860|ref|YP_005240220.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378701824|ref|YP_005183782.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378986647|ref|YP_005249803.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378991246|ref|YP_005254410.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379703206|ref|YP_005244934.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383498567|ref|YP_005399256.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386589323|ref|YP_006085723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|6960244|gb|AAF33434.1| S. typhimurium DNA-dependent ATPase DNA helicase (RECQ)
(SP:P40724); contains similarity to Pfam families PF0057
(HRDC domain, score=130.4, E=3.3e-35, N=1), PF00270
(DEAD/DEAH box helicase, score=121.6, E=1.5e-37, N=1)
and PF00271 (Helicases conserved C-terminal domain,
score=99.8, E=5.3e-26, N=1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16422522|gb|AAL22802.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194405658|gb|ACF65877.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205336505|gb|EDZ23269.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|261249081|emb|CBG26942.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996239|gb|ACY91124.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160473|emb|CBW20003.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915076|dbj|BAJ39050.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321225476|gb|EFX50533.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323132305|gb|ADX19735.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332990793|gb|AEF09776.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|380465388|gb|AFD60791.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|383796367|gb|AFH43449.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
Length = 615
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|167763147|ref|ZP_02435274.1| hypothetical protein BACSTE_01517 [Bacteroides stercoris ATCC
43183]
gi|167698441|gb|EDS15020.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 604
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/369 (45%), Positives = 239/369 (64%), Gaps = 21/369 (5%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R Q+EII +L G D LV+M GGGKS+CYQLPA+LREG A+VVSPL+SL++D
Sbjct: 9 FGYDSFRPLQEEIIRHILDGNDALVLMPTGGGKSICYQLPALLREGTAVVVSPLISLMKD 68
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L A GI A L S+ + + + +A EG LK+LY++PEK+ ++ L
Sbjct: 69 QVEALCANGISAGALNSSNDETENAALRRACM--EGRLKLLYISPEKLLAEANYL--LRD 124
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H +SL +IDEAHC SQWGHDFRP+Y +GIL QFP VP++ALTATA + + D++
Sbjct: 125 MH----ISLFAIDEAHCISQWGHDFRPEYAQMGILHQQFPHVPIIALTATADKITREDII 180
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVR---EKSSVGKVVIDEIAKYIQESYPNSESGIVYCF 323
LH+ F+S+ +RPNL V+ ++ K ++D IA++ ESGI+YC
Sbjct: 181 RQLHLNHPRTFISSFDRPNLSLTVKRGYQQKEKSKTILDFIARH------PGESGIIYCM 234
Query: 324 SRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
SR + E VAQ L++ GI YHA + + R++ + +++QV+ T+AFGMGI+K +
Sbjct: 235 SRSKTESVAQMLQKHGIRTAVYHAGLSPSLRDEAQDDFINDRVQVVCATIAFGMGIDKSN 294
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ--NL 441
VR+VIH++L KS+E++YQE GRAGRDGLPS+ LLF+ AD+ + F SG Q NL
Sbjct: 295 VRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADLILLTK--FATESGQQNINL 352
Query: 442 YDIVRYSQY 450
+ R QY
Sbjct: 353 EKLQRMQQY 361
>gi|50557416|ref|XP_506116.1| YALI0F31977p [Yarrowia lipolytica]
gi|49651986|emb|CAG78930.1| YALI0F31977p [Yarrowia lipolytica CLIB122]
Length = 1300
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/364 (45%), Positives = 229/364 (62%), Gaps = 14/364 (3%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR-- 130
+ W V F + +RANQ INA L+G DVLV+M GGGKSLCYQLPA++
Sbjct: 488 YPWTQEVYKVLRERFMLNEFRANQLHAINATLNGDDVLVLMPTGGGKSLCYQLPALVNGG 547
Query: 131 --EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
G+++V+SPL+SL++DQ L A I M S+ S ++ K AL G++ +LY
Sbjct: 548 KTRGLSVVISPLISLMKDQTEALTAKNISCAMFNSSQSVQERKQSLAAL--SSGDIALLY 605
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
V+PE +S + L K H RL+ I IDEAHC S WGHDFRPDYK L +K++ P V
Sbjct: 606 VSPEMFQQSNIMQNTLHKLHEQNRLARIVIDEAHCVSSWGHDFRPDYKALVNVKSRLPGV 665
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATA +KV+ D+ L + F + NRPNL+Y VR K+ K EI +
Sbjct: 666 PIMALTATANEKVRMDIQGCLRPNRRF-FKQSFNRPNLYYEVRLKT---KNFQQEITDML 721
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ Y ++GI+YC S+K CE ++ L++ GI AD+YHA M+ R V W K+QV
Sbjct: 722 RGRY-RGQTGIIYCHSKKLCETTSEFLKEAGIKADFYHAGMETEQRTYVQGNWQSGKIQV 780
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
+ T+AFGMGI+K DVR+VIH ++ +++E YYQE+GRAGRDGLPS+C+++F D RQ
Sbjct: 781 VCATIAFGMGIDKADVRYVIHCTVPRNMEGYYQETGRAGRDGLPSKCIVYFSQKDA-RQ- 838
Query: 429 SMVF 432
M+F
Sbjct: 839 -MLF 841
>gi|374316651|ref|YP_005063079.1| ATP-dependent DNA helicase RecQ [Sphaerochaeta pleomorpha str.
Grapes]
gi|359352295|gb|AEV30069.1| ATP-dependent DNA helicase RecQ [Sphaerochaeta pleomorpha str.
Grapes]
Length = 619
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 236/354 (66%), Gaps = 13/354 (3%)
Query: 78 RADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVV 137
RA + VFG ++R NQ+E+I+A+LSGRDV M GGGKSLCYQ+PAV+ EG+ +V+
Sbjct: 22 RAKKILKTVFGYDSFRDNQKEVISAILSGRDVFTSMPTGGGKSLCYQIPAVMFEGLTVVI 81
Query: 138 SPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKS 197
SPL++L++DQV + GI A L S+ ++ IY L + E +K+LY++PE+++
Sbjct: 82 SPLIALMKDQVDDAVSKGIAASFLNSSLESKEITEIYARLHRNE--IKLLYISPERLAID 139
Query: 198 KRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATA 257
++ L+ + +S +IDEAHC S+WGHDFRPDY +L ++ FP VP+ TATA
Sbjct: 140 G-YLQWLQTLN----ISFFAIDEAHCLSEWGHDFRPDYLSLAQIRDAFPTVPLAGFTATA 194
Query: 258 TQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSES 317
TQ+VQ+D++ +L +R + ++ NR L+Y VR+K+ + + +IA +I+ + ES
Sbjct: 195 TQQVQDDIIRILKMRDPLTVRASFNRKELYYEVRQKTEI----LSQIADFIK--LHSEES 248
Query: 318 GIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGM 377
GIVY SRK+ E+ A L+ +GI A YYHA + R K ++ +K VIV T+AFGM
Sbjct: 249 GIVYRISRKDVEKTAAYLKTQGIKALYYHAGLSREERAKNQDLFNNDKADVIVATIAFGM 308
Query: 378 GINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
GI+K ++R+VIH LSK++E YYQE+GRAGRDGL S+C++FF DV RQ +
Sbjct: 309 GIDKSNIRYVIHGDLSKNMEGYYQETGRAGRDGLASDCIMFFGAGDVARQQYFI 362
>gi|357441847|ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
gi|355480249|gb|AES61452.1| Bloom syndrome protein-like protein [Medicago truncatula]
Length = 603
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 234/376 (62%), Gaps = 9/376 (2%)
Query: 61 SSSTAVENWSGTFEWDSRADDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGG 117
SS+ N + ++E DD+ L +FG + R Q + A L+ +D ++M GG
Sbjct: 168 SSAAKDRNSTLSYEELKTLDDIELANVVIFGNKSLRPLQHQACKAALAKQDSFILMPTGG 227
Query: 118 GKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKA 176
GKSLCYQLPA L+ G+ +VVSPLLSLIQDQ++ L GIPA L S + + +
Sbjct: 228 GKSLCYQLPATLQPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQNASQAAAVLQE 287
Query: 177 LEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYK 236
L K + K+LYVTPE+I+ ++ F+ L+ H G+L+ +DEAHC SQWGHDFRPDY+
Sbjct: 288 LRKDKPSCKLLYVTPERIAGNQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHDFRPDYR 347
Query: 237 NLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSV 296
LG LK FP VP+MALTATAT V+ D++ L I I + +RPNL Y V K+
Sbjct: 348 GLGSLKQNFPRVPVMALTATATHPVREDILNALRIPHAIVLERSFDRPNLKYEVIVKT-- 405
Query: 297 GKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINARE 355
K + ++ + + + + S+ GIVYC S+ EC V++ L ++ I A YYHA + R
Sbjct: 406 -KEPLKQLGQLLMDRF-KSQCGIVYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRV 463
Query: 356 KVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSEC 415
V +W ++ ++ T+AFGMGI+K DVRFVIH+++SKS+E+YYQESGRAGRD LP+ C
Sbjct: 464 AVQKKWHDGEVHIVCATIAFGMGIDKADVRFVIHNTMSKSIESYYQESGRAGRDNLPAVC 523
Query: 416 LLFFRPADVPRQSSMV 431
+ ++ D R M+
Sbjct: 524 IALYQKKDFSRVVCMI 539
>gi|209693836|ref|YP_002261764.1| ATP-dependent DNA helicase RecQ [Aliivibrio salmonicida LFI1238]
gi|208007787|emb|CAQ77909.1| ATP-dependent DNA helicase RecQ [Aliivibrio salmonicida LFI1238]
Length = 611
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/380 (43%), Positives = 247/380 (65%), Gaps = 16/380 (4%)
Query: 62 SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSL 121
SS VE E S++ V +VFG +R Q+E+INAVL G+D LVIM GGGKSL
Sbjct: 2 SSITVEQ---PMEQVSQSQTVLRDVFGYQEFRVGQEEVINAVLEGKDSLVIMPTGGGKSL 58
Query: 122 CYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGE 181
CYQ+PA++ EG+ LV+SPL+SL++DQV L A G+ A L ST ++ + I+ +
Sbjct: 59 CYQIPALVFEGLTLVISPLISLMKDQVDQLKADGVQAECLNSTIDRDAQVSIWNRV--NS 116
Query: 182 GELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
G++KMLYV+PE++ + FM +L + L +I++DEAHC SQWGHDFRP+Y +LG +
Sbjct: 117 GQIKMLYVSPERVMM-RDFMDRLASLN----LCMIAVDEAHCISQWGHDFRPEYASLGQI 171
Query: 242 KTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVI 301
K +FP+VP+MALTATA + + D++ L + +++ + +RPN+ Y V EK +
Sbjct: 172 KQRFPNVPIMALTATADEATRKDILSRLSLPNPHEYLGSFDRPNIRYTVLEKHKP----V 227
Query: 302 DEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRW 361
+I +Y+ ++ G++YC SRK+ E + ++L I A YHA +D++ R V +
Sbjct: 228 SQIVRYLATQ--KNQCGVIYCGSRKKVEMLTEKLCNNHIRAASYHAGLDLDERNYVQEAF 285
Query: 362 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRP 421
++ +Q++V TVAFGMGINK +VRFV H + K++E+YYQE+GRAGRDGLP+E ++ + P
Sbjct: 286 QRDDIQIVVATVAFGMGINKSNVRFVAHFDIPKNIESYYQETGRAGRDGLPAEAVMLYDP 345
Query: 422 ADVPRQSSMVFYENSGLQNL 441
AD+ +V + G Q L
Sbjct: 346 ADIVWLRKLVEEKPEGPQKL 365
>gi|157368442|ref|YP_001476431.1| ATP-dependent DNA helicase RecQ [Serratia proteamaculans 568]
gi|157320206|gb|ABV39303.1| ATP-dependent DNA helicase RecQ [Serratia proteamaculans 568]
Length = 614
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 233/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IIN + G+D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 17 AEQVLRDTFGYQQFRPGQQTIINTAIGGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A ST ++E + + G+ +KMLY+ PE++
Sbjct: 77 PLISLMKDQVDQLLAYGVAAACYNSTQTREQQLEVMAGCRSGQ--IKMLYIAPERLMMDS 134
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L A L+++DEAHC SQWGHDFRP+Y+ LG+LK +FPD+P++ALTATA
Sbjct: 135 -FLDQLGGNPPA----LLAVDEAHCISQWGHDFRPEYRALGLLKQRFPDMPVIALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L ++ + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 190 ESTRGDIVRLLALQDPLVQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D + R +V + ++ LQV+V TVAFGMG
Sbjct: 244 IIYCNSRAKVEDTTARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 304 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADM 349
>gi|410624460|ref|ZP_11335257.1| ATP-dependent DNA helicase RecQ [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410155967|dbj|GAC30631.1| ATP-dependent DNA helicase RecQ [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 627
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 224/342 (65%), Gaps = 13/342 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +RA Q E+I+ +L+G+D L+++ GGGKSLCYQ+PA+ EGI +VVSPL+SL+
Sbjct: 41 DTFGYAEFRAGQMEVIDKILNGQDALILLPTGGGKSLCYQVPALALEGITIVVSPLISLM 100
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L A G+ A L S+ E+ + I + L +GE L +LYV PE++ KS F++ L
Sbjct: 101 QDQVQQLTAQGVKAAYLNSSQDAEESQQITEQLFRGE--LDLLYVAPERLLKS-YFLNSL 157
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
++ ++SLI++DEAHC S WGHDFR DY+ LG LK+QF +VP +ALTATA Q D
Sbjct: 158 QRV----KVSLIAVDEAHCVSHWGHDFRQDYRQLGRLKSQFQNVPFIALTATADHATQVD 213
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ L + F +RPN+ Y + K D++ ++++ + +GIVYC S
Sbjct: 214 IQHQLQLENPFVFKGGFDRPNIRYNLLAKYKG----FDQVVAFVKQQ--DGAAGIVYCNS 267
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + + + Q L+ GI D YHA D RE V ++ K+ LQV++ TVAFGMGINK +V
Sbjct: 268 RAKVDDLTQRLQSAGIKCDAYHAGRDTATREFVQTQFLKDDLQVVIATVAFGMGINKSNV 327
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
RFV+HH + +SVE+YYQE+GRAGRDG+P+E LL F D R
Sbjct: 328 RFVVHHDVPRSVESYYQETGRAGRDGMPAEALLLFDERDAAR 369
>gi|421359294|ref|ZP_15809589.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421361216|ref|ZP_15811481.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421369214|ref|ZP_15819397.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370097|ref|ZP_15820268.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421375163|ref|ZP_15825277.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421381841|ref|ZP_15831895.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421383689|ref|ZP_15833723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421388254|ref|ZP_15838246.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421395342|ref|ZP_15845279.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421399721|ref|ZP_15849615.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421401736|ref|ZP_15851603.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421408846|ref|ZP_15858644.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421410862|ref|ZP_15860634.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421417923|ref|ZP_15867631.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421420145|ref|ZP_15869824.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421424283|ref|ZP_15873927.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421428799|ref|ZP_15878402.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421436041|ref|ZP_15885575.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421438465|ref|ZP_15887961.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421442493|ref|ZP_15891943.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421447151|ref|ZP_15896554.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|423142444|ref|ZP_17130082.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|436590140|ref|ZP_20511973.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436773695|ref|ZP_20520937.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436801171|ref|ZP_20524764.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436806449|ref|ZP_20526657.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436813890|ref|ZP_20532071.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436846021|ref|ZP_20539079.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436847880|ref|ZP_20539851.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436859968|ref|ZP_20547789.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436867019|ref|ZP_20552419.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436868646|ref|ZP_20553305.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436876222|ref|ZP_20557703.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436890157|ref|ZP_20565743.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436898410|ref|ZP_20570408.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436901964|ref|ZP_20572847.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436908529|ref|ZP_20575758.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436917083|ref|ZP_20580671.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436922688|ref|ZP_20584694.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436937839|ref|ZP_20592942.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436940075|ref|ZP_20594112.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436948403|ref|ZP_20598638.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436958486|ref|ZP_20603161.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436967336|ref|ZP_20607279.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436980997|ref|ZP_20613386.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|437000083|ref|ZP_20620555.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437008856|ref|ZP_20623591.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437014194|ref|ZP_20625395.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437026436|ref|ZP_20629799.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437037336|ref|ZP_20634192.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437053403|ref|ZP_20642484.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437061353|ref|ZP_20646907.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437063066|ref|ZP_20647795.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437071962|ref|ZP_20652217.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437083523|ref|ZP_20659197.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437092191|ref|ZP_20663717.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437098966|ref|ZP_20665653.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437119083|ref|ZP_20670704.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437131539|ref|ZP_20677442.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437139344|ref|ZP_20681754.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437142342|ref|ZP_20683688.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437149724|ref|ZP_20688293.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437158406|ref|ZP_20693315.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437165051|ref|ZP_20697379.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437173698|ref|ZP_20701890.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437184963|ref|ZP_20708690.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437234431|ref|ZP_20713723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437257290|ref|ZP_20715882.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437265075|ref|ZP_20720272.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437273609|ref|ZP_20724778.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437284293|ref|ZP_20729497.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437318852|ref|ZP_20738133.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437320960|ref|ZP_20738439.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437342283|ref|ZP_20745299.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437395546|ref|ZP_20751328.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437419348|ref|ZP_20754380.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437439041|ref|ZP_20757093.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437463867|ref|ZP_20763421.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437472396|ref|ZP_20765495.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437487635|ref|ZP_20769971.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437512325|ref|ZP_20777246.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437529101|ref|ZP_20780305.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437557237|ref|ZP_20785110.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437569652|ref|ZP_20787960.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437582271|ref|ZP_20792322.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437599758|ref|ZP_20797007.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437620810|ref|ZP_20804300.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437630225|ref|ZP_20806226.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437656115|ref|ZP_20810623.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437674556|ref|ZP_20816555.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437689555|ref|ZP_20820139.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437703289|ref|ZP_20824415.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437727903|ref|ZP_20830344.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437778162|ref|ZP_20836273.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437809292|ref|ZP_20840588.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437899536|ref|ZP_20849750.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|438058078|ref|ZP_20856562.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438088905|ref|ZP_20860120.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438102051|ref|ZP_20864758.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438107411|ref|ZP_20866718.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|440762769|ref|ZP_20941820.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440766569|ref|ZP_20945558.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440771658|ref|ZP_20950571.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445130940|ref|ZP_21381550.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|445141894|ref|ZP_21385681.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445150436|ref|ZP_21389723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445174893|ref|ZP_21397165.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445204757|ref|ZP_21401335.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445230566|ref|ZP_21405428.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445303745|ref|ZP_21411560.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445328683|ref|ZP_21413170.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445345133|ref|ZP_21418007.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445358858|ref|ZP_21422890.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|379050373|gb|EHY68266.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|395982718|gb|EJH91917.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395985586|gb|EJH94755.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395993696|gb|EJI02788.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395999768|gb|EJI08784.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396005742|gb|EJI14716.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396007658|gb|EJI16603.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396012742|gb|EJI21637.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396020771|gb|EJI29610.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396021181|gb|EJI30008.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396026583|gb|EJI35349.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396026668|gb|EJI35433.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396034171|gb|EJI42873.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396039462|gb|EJI48088.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396045947|gb|EJI54537.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396047582|gb|EJI56154.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396055399|gb|EJI63885.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396060547|gb|EJI68990.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396060632|gb|EJI69074.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396072908|gb|EJI81215.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396073411|gb|EJI81713.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396075234|gb|EJI83509.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|434958340|gb|ELL51900.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434961813|gb|ELL55066.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|434969388|gb|ELL62095.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434974710|gb|ELL67042.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434978162|gb|ELL70220.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434980142|gb|ELL72071.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434987107|gb|ELL78757.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434991131|gb|ELL82651.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434993686|gb|ELL85085.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435003891|gb|ELL94890.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435006652|gb|ELL97528.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435010977|gb|ELM01723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435013508|gb|ELM04143.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435020275|gb|ELM10688.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435030324|gb|ELM20355.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435031946|gb|ELM21892.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435034925|gb|ELM24781.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435043992|gb|ELM33691.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435046917|gb|ELM36526.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435055947|gb|ELM45352.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435056032|gb|ELM45436.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435059378|gb|ELM48656.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435061695|gb|ELM50916.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435067089|gb|ELM56159.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435067431|gb|ELM56472.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435085682|gb|ELM74230.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435086732|gb|ELM75262.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435088035|gb|ELM76493.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435089334|gb|ELM77771.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435089411|gb|ELM77847.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435103456|gb|ELM91546.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435108066|gb|ELM96043.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435110863|gb|ELM98770.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435112004|gb|ELM99887.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435124000|gb|ELN11483.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435126022|gb|ELN13434.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435130597|gb|ELN17826.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435131711|gb|ELN18918.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435142463|gb|ELN29364.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435147536|gb|ELN34299.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435151498|gb|ELN38139.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435154464|gb|ELN41044.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435158385|gb|ELN44787.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435160339|gb|ELN46619.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435167446|gb|ELN53370.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435177494|gb|ELN62817.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177804|gb|ELN63075.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435178514|gb|ELN63722.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435185584|gb|ELN70443.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435192097|gb|ELN76651.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435193062|gb|ELN77563.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435196876|gb|ELN81195.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435198704|gb|ELN82860.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435201681|gb|ELN85570.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435212790|gb|ELN95748.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435217896|gb|ELO00304.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435226055|gb|ELO07650.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435230671|gb|ELO11962.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435232525|gb|ELO13620.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435241056|gb|ELO21444.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435245892|gb|ELO25920.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435250142|gb|ELO29884.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435256685|gb|ELO35980.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435263151|gb|ELO42218.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435264044|gb|ELO43066.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435272436|gb|ELO50837.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435278119|gb|ELO55991.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435282011|gb|ELO59650.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435284000|gb|ELO61512.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435291040|gb|ELO67927.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435293720|gb|ELO70384.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435299379|gb|ELO75529.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435303382|gb|ELO79270.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435314209|gb|ELO87664.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435317076|gb|ELO90139.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435321829|gb|ELO94188.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|435323956|gb|ELO95934.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435333513|gb|ELP04315.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|436420777|gb|ELP18634.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436421917|gb|ELP19757.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|436422492|gb|ELP20328.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444850160|gb|ELX75264.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444851274|gb|ELX76366.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444856864|gb|ELX81883.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444858827|gb|ELX83800.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444861272|gb|ELX86157.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444864271|gb|ELX89075.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444878165|gb|ELY02289.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|444879443|gb|ELY03543.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444879737|gb|ELY03830.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444885738|gb|ELY09515.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 609
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|343506824|ref|ZP_08744288.1| ATP-dependent DNA helicase RecQ [Vibrio ichthyoenteri ATCC 700023]
gi|342801358|gb|EGU36830.1| ATP-dependent DNA helicase RecQ [Vibrio ichthyoenteri ATCC 700023]
Length = 612
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/361 (44%), Positives = 235/361 (65%), Gaps = 13/361 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V VFG +R+ Q+++I A + G+D LVIM GGGKSLCYQ+PA++REG+ LV+S
Sbjct: 17 AQSVLEQVFGYQQFRSGQEQVIEAAIQGQDSLVIMPTGGGKSLCYQVPALVREGLTLVIS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A + ST S+ED +Y + G LK++YV+PE++ +
Sbjct: 77 PLISLMKDQVDQLKADGVAAECVNSTMSREDLISVYNRMNSGA--LKLVYVSPERVLM-R 133
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L+ LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP MALTATA
Sbjct: 134 DFIERLQGL----SLSMIAVDEAHCISQWGHDFRPEYASLGQLKHYFPHVPFMALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ND++ L + + ++ + +RPN+ Y + EK + +I +Y+ G
Sbjct: 190 DATRNDIVSRLQLVDPLNYLGSFDRPNIRYTLLEKHKP----VSQIIRYLDTQ--KGHCG 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SRK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMG
Sbjct: 244 IIYCGSRKKVEMVTEKLCNNHIRAASYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGL 438
INKP+VRFV H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G
Sbjct: 304 INKPNVRFVAHFDIPRNIESYYQETGRAGRDGLPAEAVMLYDPADISWLRRMLDEKDDGP 363
Query: 439 Q 439
Q
Sbjct: 364 Q 364
>gi|323494185|ref|ZP_08099300.1| ATP-dependent DNA helicase RecQ [Vibrio brasiliensis LMG 20546]
gi|323311579|gb|EGA64728.1| ATP-dependent DNA helicase RecQ [Vibrio brasiliensis LMG 20546]
Length = 612
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 240/355 (67%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQE+I+A ++G+D LVIM GGGKSLCYQ+PA++R G+ LV+SPL+SL+
Sbjct: 23 DVFGYQSFRDGQQEVIDAAVAGQDSLVIMPTGGGKSLCYQIPALVRSGLTLVISPLISLM 82
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G +K++YV+PE++ + F+ +L
Sbjct: 83 KDQVDQLKANGVAAECINSTMPREELISVYNRMNSGV--IKLVYVSPERVLM-RDFIERL 139
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP+MALTATA ++D
Sbjct: 140 EGLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPVMALTATADDATRSD 195
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ + L + + ++ + +RPN+ Y + EK I ++ +++++ N GI+YC S
Sbjct: 196 ITQRLQLTEPHAYLGSFDRPNIRYTLVEKHKP----ISQVVRFLEDQRGNC--GIIYCGS 249
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L G+ A YHA +D + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 250 RKKVEMVTEKLCNNGLRAASYHAGLDADERAYVQDAFQRDDIQIVVATVAFGMGINKPNV 309
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 310 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDEGPQ 364
>gi|438141963|ref|ZP_20875172.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434939609|gb|ELL46400.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
Length = 609
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|168238410|ref|ZP_02663468.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197288782|gb|EDY28157.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 615
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 227/339 (66%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +VVSPL+SL++
Sbjct: 26 TFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMK 85
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A L ST S+E + + G+ +++LY+ PE++ F+ L
Sbjct: 86 DQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLMLDN-FLDHLA 142
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTATA + D+
Sbjct: 143 HWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQDI 198
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SGI+YC SR
Sbjct: 199 IRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSGIIYCNSR 252
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAFGMGINKP+VR
Sbjct: 253 AKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGINKPNVR 312
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 313 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|421079860|ref|ZP_15540796.1| ATP-dependent helicase RecQ [Pectobacterium wasabiae CFBP 3304]
gi|401705347|gb|EJS95534.1| ATP-dependent helicase RecQ [Pectobacterium wasabiae CFBP 3304]
Length = 608
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 232/340 (68%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEII+A LSG+D LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST ++E + + G+ +K+LY+ PE+++ + F+ L
Sbjct: 79 KDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTGQ--IKLLYIAPERLT-TDSFLDHL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
++SLI++DEAHC SQWGHDFRP+Y+ LG +K +FP +P +ALTATA + +ND
Sbjct: 136 AHW----QISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRND 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L + + +S+ +RPN+ Y + EK +D++ ++Q +SGI+YC S
Sbjct: 192 IVRLLDLHSPLIQISSFDRPNIRYTLVEKFKP----LDQLWMFVQGQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R E ++ L+ RG+SA YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RSRVEDISARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGL +E LF+ PAD+
Sbjct: 306 RFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADM 345
>gi|290513154|ref|ZP_06552516.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. 1_1_55]
gi|289774365|gb|EFD82371.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. 1_1_55]
Length = 618
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 20 ESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVMGGLTV 79
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 80 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--VRLLYIAPERLM 137
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 138 LDN-FLEHLANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRLPQIPFMALTA 192
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 193 TADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 246
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 247 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAF 306
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 307 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 355
>gi|421724743|ref|ZP_16163951.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca M5al]
gi|410374417|gb|EKP29090.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca M5al]
Length = 608
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q II+ L+GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQDTIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + LS++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLTHWN----LSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPHIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLDLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|161505534|ref|YP_001572646.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160866881|gb|ABX23504.1| hypothetical protein SARI_03699 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 615
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMTGCRTGQ--IRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|413920232|gb|AFW60164.1| hypothetical protein ZEAMMB73_604033 [Zea mays]
Length = 618
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 163/357 (45%), Positives = 219/357 (61%), Gaps = 9/357 (2%)
Query: 80 DDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
DDV +FG +R Q E A + +D ++M GGGKSLCYQLPA L G+ +V
Sbjct: 204 DDVNFANAVIFGNKGFRPLQYEACRAAMDNQDCFILMPTGGGKSLCYQLPATLHPGVTVV 263
Query: 137 VSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VSPLLSLIQDQ++ L +PA L S + + + L G+ K+LYVTPE+I
Sbjct: 264 VSPLLSLIQDQIVALTYRFAVPAAFLNSQQTSAQASAVIQELRCGKPAFKLLYVTPERIV 323
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ FM L G L+ IDEAHC SQWGHDFRPDY+ LG LK FP VP+MALTA
Sbjct: 324 TNYSFMETLRGLDQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCLKQNFPRVPIMALTA 383
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TAT+ V+ D++ L I + + +R NL Y V K+ K ++ ++E + N
Sbjct: 384 TATESVRKDVLGALRIPNAVVLKRSFDRLNLNYEVIGKT---KTFQKQLGDLLKERFMN- 439
Query: 316 ESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
ESGIVYC S+ EC A+ LR++ I +YHA + R V +W +++VI T+A
Sbjct: 440 ESGIVYCLSKNECADTAKFLREKYKIKCAHYHASLAARQRTSVQEKWHSGEVKVICATIA 499
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
FGMGI+KPDVRFVIH++LSKS+E+YYQESGRAGRD LP+ C++ ++ D R M+
Sbjct: 500 FGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDELPAHCIVLYQKKDFSRIVCML 556
>gi|197247389|ref|YP_002148883.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|198243255|ref|YP_002217887.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205354483|ref|YP_002228284.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207859158|ref|YP_002245809.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|238912961|ref|ZP_04656798.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|375121408|ref|ZP_09766575.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|375125367|ref|ZP_09770531.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|197211092|gb|ACH48489.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197937771|gb|ACH75104.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205274264|emb|CAR39283.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206710961|emb|CAR35329.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326625675|gb|EGE32020.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326629617|gb|EGE35960.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
Length = 615
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|227325786|ref|ZP_03829810.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 609
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 232/340 (68%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEII+A LSG+D LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST ++E + + G+ +K+LY+ PE+++ + F+ L
Sbjct: 79 KDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTGQ--IKLLYIAPERLT-TDSFLDHL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
++SLI++DEAHC SQWGHDFRP+Y+ LG +K +FP +P +ALTATA + +ND
Sbjct: 136 AHW----QISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRND 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L ++ + +S+ +RPN+ Y + EK +D++ ++Q +SGI+YC S
Sbjct: 192 IVRLLDLQSPLIQISSFDRPNIRYTLVEKFKP----LDQLWMFVQGQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R E + L+ RG+SA YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RSRVEDICARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGL +E LF+ PAD+
Sbjct: 306 RFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADM 345
>gi|113461847|ref|YP_719916.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 129PT]
gi|112823890|gb|ABI25979.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 129PT]
Length = 624
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 233/348 (66%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A D+ +VFG ++R Q E+I A L+ +D LVIMA GGGKSLCYQ+PA+ G+ LV
Sbjct: 23 STALDILHSVFGYQSFRKGQLEVIEATLAKKDSLVIMATGGGKSLCYQIPALCFSGLTLV 82
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY-KALEKGEGELKMLYVTPEKIS 195
+SPL+SL++DQV L A GI A L S+ + E ++ + KA+ G+LK+LY++PEK +
Sbjct: 83 ISPLISLMKDQVDQLLANGINADYLNSSQTFEQQQLVQNKAMS---GKLKLLYISPEK-A 138
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F + C ++S I++DE HC SQWGHDFRP+Y LG LK FPD P+MALTA
Sbjct: 139 LTTSFFHFISHC----KVSFIAVDETHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTA 194
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA Q + D++ L + ++ + +RPN+ Y + EK +++++++I +
Sbjct: 195 TADQATRQDILIHLKLSNPHIYIGSFDRPNIRYSLVEKFKP----MEQLSQFIAKQ--KG 248
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E++A+ LRQ+GISA+ YHA M RE V + + +Q++V T+AF
Sbjct: 249 KSGIIYCNSRNKVERIAESLRQKGISAEAYHAGMSNEQREFVQRAFQHDNVQIVVATIAF 308
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV H L +S+E YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 GMGINKSNVRFVAHFDLPRSIEAYYQETGRAGRDDLPAEAVLFYEPAD 356
>gi|378957075|ref|YP_005214562.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357207686|gb|AET55732.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
Length = 615
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|242071927|ref|XP_002451240.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
gi|241937083|gb|EES10228.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
Length = 624
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 221/357 (61%), Gaps = 9/357 (2%)
Query: 80 DDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
DDV +FG ++R Q E A ++ +D ++M GGGKSLCYQLPA L G+ +V
Sbjct: 210 DDVNFANVVIFGNKSFRPLQYEACRAAMNNQDCFILMPTGGGKSLCYQLPATLHPGVTVV 269
Query: 137 VSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VSPLLSLIQDQ++ L IPA L S + + + L G K+LYVTPE+I+
Sbjct: 270 VSPLLSLIQDQIVALTYKFAIPAAFLNSQQTPAQASAVIQELRYGTPSFKLLYVTPERIA 329
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ FM L G L+ IDEAHC SQWGHDFRPDY+ LG LK FP VP+MALTA
Sbjct: 330 ANYSFMEMLRGLDQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCLKQNFPRVPIMALTA 389
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TAT+ V+ D++ L I + + +R NL Y V K+ K ++ ++E + N
Sbjct: 390 TATESVRKDVLSALRIPNAVILKRSFDRLNLNYEVIGKT---KTPQKQLGDLLKERFMN- 445
Query: 316 ESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
+SGIVYC S+ EC A+ LR++ I +YHA + R V +W +++VI T+A
Sbjct: 446 KSGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAARQRTSVQEKWHSGEVKVICATIA 505
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
FGMGI+KPDVRFVIH+++SKS+E+YYQESGRAGRD LP+ C++ ++ D R M+
Sbjct: 506 FGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDDLPAHCIVLYQKKDFSRIVCML 562
>gi|293393904|ref|ZP_06638211.1| ATP-dependent helicase RecQ [Serratia odorifera DSM 4582]
gi|291423731|gb|EFE96953.1| ATP-dependent helicase RecQ [Serratia odorifera DSM 4582]
Length = 614
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 232/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA ++G+D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 17 AEQVLRDTFGYQQFRPGQQTIINAAINGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A ST ++E + + +G+ +K+LY+ PE++
Sbjct: 77 PLISLMKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRRGD--VKLLYIAPERLMMDS 134
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L+ C A L+++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA
Sbjct: 135 -FLDLLDHCQPA----LLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D+ +L + + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 190 EATRGDITRLLALHDPLVQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMG
Sbjct: 244 IIYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 304 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADM 349
>gi|312881433|ref|ZP_07741228.1| ATP-dependent DNA helicase RecQ [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370915|gb|EFP98372.1| ATP-dependent DNA helicase RecQ [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 612
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 240/355 (67%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
N+FG ++R QQE+I ++G+D LVI+ GGGKSLCYQ+PA++R G+ LV+SPL+SL+
Sbjct: 23 NIFGYQSFRCGQQEVIECAVTGQDSLVILPTGGGKSLCYQIPALVRSGLTLVISPLISLM 82
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ YK + +G +K++YV+PE++ + F+ +L
Sbjct: 83 KDQVDQLVANGVAAGYVNSTMDREELVNTYKRMN--DGHIKLIYVSPERVLM-RDFIERL 139
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ L++I++DEAHC SQWGHDFRP+Y +LG LK +FP VP MALTATA + D
Sbjct: 140 DNLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPSVPFMALTATADDATRKD 195
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L +++ ++ + +RPN+ Y + EK + ++ ++++ SGI+YC S
Sbjct: 196 ILQRLQLKEPFSYLGSFDRPNIRYNLIEKHKP----VSQVVRFLEGQ--RGCSGIIYCGS 249
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E + ++L G+ A YHA +D++ R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 250 RKKVEMLTEKLCNNGLRAASYHAGLDVDERAYVQDAFQRDDIQIVVATVAFGMGINKPNV 309
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 310 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADIGWLRRMLDEKDDGPQ 364
>gi|392556563|ref|ZP_10303700.1| ATP-dependent DNA helicase [Pseudoalteromonas undina NCIMB 2128]
Length = 607
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 152/341 (44%), Positives = 237/341 (69%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q +I+A ++G+D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 22 VFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G +K+LYV PEK+ + + F+ +L
Sbjct: 82 DQVTQLQALGVKAAYINNSLAREEQQLVYQQLH--QGLIKLLYVAPEKVLQ-REFLERLS 138
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 139 HLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFTHVPMMALTATADKATRFDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E S+SGI+YC SR
Sbjct: 195 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KSQSGIIYCTSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A++L G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 249 KRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 309 FVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGR 349
>gi|340001407|ref|YP_004732291.1| ATP-dependent DNA helicase [Salmonella bongori NCTC 12419]
gi|339514769|emb|CCC32539.1| ATP-dependent DNA helicase [Salmonella bongori NCTC 12419]
Length = 609
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKRVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|398799825|ref|ZP_10559106.1| ATP-dependent DNA helicase RecQ [Pantoea sp. GM01]
gi|398097370|gb|EJL87679.1| ATP-dependent DNA helicase RecQ [Pantoea sp. GM01]
Length = 608
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 229/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V + FG +R QQ II L+GRD LV+M GGGKSLCYQ+PA++REG+ LVVS
Sbjct: 13 AQQVLQDTFGYQQFRPGQQNIIETALAGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E ++ ++ G+ LK+LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQTREQQQQVFADCRSGK--LKLLYIAPERLMMDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L H ++++DEAHC SQWGHDFRP+Y ++G L+ FP +P+MALTATA
Sbjct: 131 -FLDSL----HQWNPVMLAVDEAHCISQWGHDFRPEYGSIGQLRQHFPHLPVMALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +ND+ +L + + +S+ +RPN+ Y + EK +++ +Y+Q+ +SG
Sbjct: 186 ETTRNDIAHLLQMDDPLIQISSFDRPNIRYTLVEKFKP----TEQLLRYVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA +D R V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGIDSAQRASVQEAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|386823577|ref|ZP_10110722.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica PRI-2C]
gi|386379516|gb|EIJ20308.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica PRI-2C]
Length = 610
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 231/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA + G D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A ST ++E + + G+ +KMLY+ PE++
Sbjct: 73 PLISLMKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRSGQ--IKMLYIAPERLMMDS 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L+ C A L+++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA
Sbjct: 131 -FLDLLDHCPPA----LLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + VS+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 ESTRGDIVRLLALHDPLVQVSSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D + R +V + ++ LQV+V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTTARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADM 345
>gi|383311275|ref|YP_005364085.1| ATP-dependent DNA helicase recQ [Pasteurella multocida subsp.
multocida str. HN06]
gi|386835294|ref|YP_006240611.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
multocida str. 3480]
gi|380872547|gb|AFF24914.1| ATP-dependent DNA helicase recQ [Pasteurella multocida subsp.
multocida str. HN06]
gi|385201997|gb|AFI46852.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
multocida str. 3480]
Length = 632
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 233/345 (67%), Gaps = 13/345 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A DV VFG ++R Q+E+I+A L G+D LVIMA G GKSLCYQ+PA+ EG+ LV+S
Sbjct: 26 ALDVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVIS 85
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A GI A L S+ + +++ + L G LK+LYV+PEK+ +
Sbjct: 86 PLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLM--SGTLKLLYVSPEKVMTTS 143
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F + C ++S ++IDEAHC SQWGHDFRP+Y LG LK+ FP P+MALTATA
Sbjct: 144 -FFHLISHC----KVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPYAPIMALTATAD 198
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L+++ ++ + +RPN+ Y + EK ++++ +++ +SG
Sbjct: 199 HATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKP----MEQLCRFVLGQ--KGKSG 252
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E++A+ LR +G+SA YHA ++ RE+V + ++ +QV+V T+AFGMG
Sbjct: 253 IIYCNSRSKVERIAESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMG 312
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
INK +VRFV+H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 313 INKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 357
>gi|386821390|ref|ZP_10108606.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386426496|gb|EIJ40326.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 699
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/338 (47%), Positives = 229/338 (67%), Gaps = 15/338 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R Q+EII+ +L+G D LVIM GGGKS+CYQLPA+L++G+ +V+SPL++L++D
Sbjct: 15 FGYDSFRPLQREIIDTILNGNDCLVIMPTGGGKSICYQLPALLQDGLTIVISPLIALMKD 74
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L GIPA L S+ S +++ I+ +E + +K+LYV PE +S LE
Sbjct: 75 QVDGLNVNGIPACFLNSSQSTAEQEVIFNDIEAKK--IKLLYVAPES-------LSYLEN 125
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ ++SLI++DEAHC S WGHDFRP Y LG LK +FP+ P++ALTATA + + D+
Sbjct: 126 IFSSTKISLIAVDEAHCISSWGHDFRPAYTQLGFLKNRFPNTPLIALTATADKATREDIA 185
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L+I KFV++ +R NL VR G I +I +++ + PN ESGIVYC SRK
Sbjct: 186 NQLNISNAKKFVASFDRKNLSLEVRP----GTDRIKQIIQFLNKR-PN-ESGIVYCLSRK 239
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
E +A++L+Q G +A+ YHA ++ + R KV + +K Q++ TVAFGMGI+K +VR+
Sbjct: 240 TTESIAEKLQQAGYNAEAYHAGVNHDGRSKVQEDFINDKTQIVCATVAFGMGIDKSNVRW 299
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
VIH++L K++E YYQE GRAGRDGLPS LLF ADV
Sbjct: 300 VIHYNLPKNIEGYYQEIGRAGRDGLPSYTLLFHSYADV 337
>gi|418513709|ref|ZP_13079934.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366081267|gb|EHN45216.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 615
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 16 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 75
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 76 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--VRLLYIAPERLM 133
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 134 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 188
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 189 TADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 242
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 243 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAF 302
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 303 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|241952456|ref|XP_002418950.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
gi|223642289|emb|CAX44258.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
Length = 1164
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/351 (44%), Positives = 228/351 (64%), Gaps = 10/351 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPL 140
+VF + ++R NQ E + A LS +DV V+M GGGKSLCYQLPA+++ +G +V+SPL
Sbjct: 434 DVFKLQSFRPNQLEAVVATLSSKDVFVLMPTGGGKSLCYQLPALVKSGATKGTTVVISPL 493
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
+SL+QDQV L A I A M +S +D K EG L ++Y++PEK +KS
Sbjct: 494 ISLMQDQVQHLLAKNIKAGMFSSKGGNDDNKHTIHLFR--EGFLDIVYLSPEKANKSSLI 551
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ + ++ +L+ + IDEAHC S WGHDFRPDY+ LG K +FP VP+MALTATA +K
Sbjct: 552 QKIMTQLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKDKFPKVPIMALTATANEK 611
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
V+ D++ L + + + NR NLFY ++ KS G ++ EI YI + ++GI+
Sbjct: 612 VRMDILHNLKMDNPVLLKQSFNRTNLFYEIKWKS--GNYLL-EIKDYILSRF-KGKTGII 667
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC S++ CEQ + +L + G+ +YHA M ++R + RW ++K+QVI T+AFGMGI+
Sbjct: 668 YCHSKQSCEQTSMKLNEYGLKTSFYHAGMSADSRFNIQKRWQESKIQVICATIAFGMGID 727
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
KPDVRFVIH L +++E YYQE+GRAGRDG SEC++++ D S++
Sbjct: 728 KPDVRFVIHLFLPRTLEGYYQETGRAGRDGNYSECVMYYSYKDARSLQSLI 778
>gi|373467701|ref|ZP_09558994.1| ATP-dependent DNA helicase RecQ [Haemophilus sp. oral taxon 851
str. F0397]
gi|371758043|gb|EHO46820.1| ATP-dependent DNA helicase RecQ [Haemophilus sp. oral taxon 851
str. F0397]
Length = 619
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 229/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+INA L+G+D LV+MA G GKSLCYQ+PA+ G+ LV+SPL+SL+
Sbjct: 22 SVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFAGLTLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+ LK+LYV+PEK+ + F
Sbjct: 82 KDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQ--LKLLYVSPEKVMTNSFF---- 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++S I+IDEAHC SQWGHDFRP+Y LG LK FP P+MALTATA + D
Sbjct: 136 -QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADYATRQD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L++ +++ + +RPN+ Y + EK ++++ +++ +SGI+YC S
Sbjct: 195 ILTHLNLENPHRYIGSFDRPNIRYTLEEKYKP----MEQLTRFVLAQ--KGKSGIIYCNS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 249 RNKVERIAESLRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347
>gi|333925046|ref|YP_004498625.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS12]
gi|333929999|ref|YP_004503577.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica AS9]
gi|386326870|ref|YP_006023040.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS13]
gi|333471606|gb|AEF43316.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica AS9]
gi|333489106|gb|AEF48268.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS12]
gi|333959203|gb|AEG25976.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS13]
Length = 618
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 231/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA + G D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 21 AEQVLRDTFGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 80
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A ST ++E + + G+ +KMLY+ PE++
Sbjct: 81 PLISLMKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRSGQ--IKMLYIAPERLMMDS 138
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L+ C A L+++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA
Sbjct: 139 -FLDLLDHCPPA----LLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATAD 193
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + +S+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 194 ESTRGDIVRLLALHDPLVQISSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 247
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D + R +V + ++ LQV+V TVAFGMG
Sbjct: 248 IIYCNSRAKVEDTTARLQSRGLSVGAYHAGLDNDRRSQVQEAFQRDDLQVVVATVAFGMG 307
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 308 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADM 353
>gi|421254067|ref|ZP_15709061.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_buffalo]
gi|401693064|gb|EJS87299.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_buffalo]
Length = 632
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 232/345 (67%), Gaps = 13/345 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A DV VFG ++R Q+E+I+A L G+D LVIMA G GKSLCYQ+PA+ EG+ LV+S
Sbjct: 26 ALDVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVIS 85
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A GI A L S+ + +++ + L G LK+LYV+PEK+ +
Sbjct: 86 PLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLM--SGTLKLLYVSPEKVMTTS 143
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F + C ++S ++IDE HC SQWGHDFRP+Y LG LK+ FP P+MALTATA
Sbjct: 144 -FFHLISHC----KVSFVAIDETHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATAD 198
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L+++ ++ + +RPN+ Y + EK I+++ +++ +SG
Sbjct: 199 HATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKP----IEQLCRFVLGQ--KGKSG 252
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E++A+ LR +G+SA YHA ++ RE+V + ++ +QV+V T+AFGMG
Sbjct: 253 IIYCNSRSKVERIAESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMG 312
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
INK +VRFV+H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 313 INKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 357
>gi|206578880|ref|YP_002241119.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae 342]
gi|206567938|gb|ACI09714.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae 342]
Length = 608
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVMGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--VRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|428778146|ref|YP_007169933.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
gi|428692425|gb|AFZ45719.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
Length = 709
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 231/340 (67%), Gaps = 13/340 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R Q+ II AV RDVL +M GGGKSLCYQLPA+L+ G+A+VVSPL++L+QD
Sbjct: 12 FGYETFRPGQKAIIEAVYQQRDVLAVMPTGGGKSLCYQLPALLKPGLAVVVSPLIALMQD 71
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKI--SKSKRFMSKL 204
QV L GI A L S+ + E+ + + L GE+K+LY+ PEK+ SK F+ +
Sbjct: 72 QVETLQKNGIAATFLNSSLTAEEAR--SRRLSILNGEMKLLYLAPEKLVSPASKTFLQAV 129
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
++ H LSL +IDEAHC S+WGHDFRP+Y+ L L++ FP +PM+ALTATAT++V++D
Sbjct: 130 QEKHG---LSLFAIDEAHCISEWGHDFRPEYRQLKTLRSLFPKIPMIALTATATERVRSD 186
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + + +++ +RPNL+Y V+ K + +++ K+I+ + SGIVYC S
Sbjct: 187 IIHQLTLDQPKVQITSFDRPNLYYEVQPKQ---RQHYNQLFKFIRH---QTGSGIVYCLS 240
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R+ E+VA L++ GISA YHA M R R+ ++ +QV+V T+AFGMGI+KPD+
Sbjct: 241 RRRVEEVAFRLKKDGISALPYHAGMSDGNRSDYQTRFLRDDVQVMVATIAFGMGIDKPDI 300
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H+ L +++E YYQE+GRAGRD P++CLL F D+
Sbjct: 301 RFVVHYDLPRNLENYYQEAGRAGRDSEPAQCLLLFGAKDI 340
>gi|242237700|ref|YP_002985881.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech703]
gi|242129757|gb|ACS84059.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech703]
Length = 607
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/339 (45%), Positives = 232/339 (68%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R QQ II+A +SGRD LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL++
Sbjct: 20 TFGYQQFRPGQQAIIHAAVSGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISLMK 79
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A L ST ++E + + G+ +++LY+ PE+++ ++ F+ +
Sbjct: 80 DQVDQLQAYGVSAACLNSTQTREQQMAVIAGCRSGQ--IRLLYIAPERLT-NEGFLEQFT 136
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ SLI+IDEAHC SQWGHDFRP+Y+ LG +K +FP +P++ALTATA + +ND+
Sbjct: 137 GWNP----SLIAIDEAHCISQWGHDFRPEYRELGYIKQRFPQLPVVALTATADETTRNDI 192
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ +L +R + +S+ +RPN+ Y + EK +D++ ++Q +SGI+YC SR
Sbjct: 193 IRLLGLRDPLVQISSFDRPNIRYTLVEKFKP----LDQLWLFVQGQ--RGKSGIIYCNSR 246
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ E ++ L+ RG+S YHA +D R +V + ++ LQV+V TVAFGMGINKP+VR
Sbjct: 247 AKVEDISARLQNRGLSVGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVR 306
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGL +E LF+ PAD+
Sbjct: 307 FVVHFDIPRTIESYYQETGRAGRDGLAAEAALFYDPADM 345
>gi|238892418|ref|YP_002917152.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|365144577|ref|ZP_09348793.1| ATP-dependent DNA helicase recQ [Klebsiella sp. 4_1_44FAA]
gi|378976322|ref|YP_005224463.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386037440|ref|YP_005957353.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae KCTC 2242]
gi|402783066|ref|YP_006638612.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419976110|ref|ZP_14491512.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419981887|ref|ZP_14497157.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987417|ref|ZP_14502537.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419992987|ref|ZP_14507936.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419999205|ref|ZP_14513983.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420004974|ref|ZP_14519604.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010567|ref|ZP_14525038.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420016807|ref|ZP_14531094.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022207|ref|ZP_14536378.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420027870|ref|ZP_14541857.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420033622|ref|ZP_14547424.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420039320|ref|ZP_14552956.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420045195|ref|ZP_14558666.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420051125|ref|ZP_14564416.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420056758|ref|ZP_14569910.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061820|ref|ZP_14574803.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420068079|ref|ZP_14580864.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073504|ref|ZP_14586129.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420079309|ref|ZP_14591756.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420085306|ref|ZP_14597536.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421908873|ref|ZP_16338705.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421917229|ref|ZP_16346791.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424833268|ref|ZP_18257996.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424930893|ref|ZP_18349265.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425084062|ref|ZP_18487159.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425094091|ref|ZP_18497174.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428151187|ref|ZP_18998930.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428934219|ref|ZP_19007747.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae JHCK1]
gi|428939135|ref|ZP_19012250.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae VA360]
gi|238544734|dbj|BAH61085.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|339764568|gb|AEK00789.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae KCTC 2242]
gi|363648000|gb|EHL87187.1| ATP-dependent DNA helicase recQ [Klebsiella sp. 4_1_44FAA]
gi|364515733|gb|AEW58861.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397341372|gb|EJJ34552.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397342014|gb|EJJ35183.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397344702|gb|EJJ37833.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397358598|gb|EJJ51314.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397359601|gb|EJJ52294.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397363627|gb|EJJ56265.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397374431|gb|EJJ66767.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397378264|gb|EJJ70477.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397385030|gb|EJJ77135.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392581|gb|EJJ84369.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397394580|gb|EJJ86306.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403296|gb|EJJ94873.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397409845|gb|EJK01145.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397410215|gb|EJK01502.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397420262|gb|EJK11348.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397427007|gb|EJK17798.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397429873|gb|EJK20579.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397437837|gb|EJK28380.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397443829|gb|EJK34130.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397449321|gb|EJK39461.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543905|gb|AFQ68054.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405597672|gb|EKB70935.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405610253|gb|EKB83062.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407805080|gb|EKF76331.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410117240|emb|CCM81330.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410120477|emb|CCM89416.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414710718|emb|CCN32422.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426303386|gb|EKV65559.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae JHCK1]
gi|426304490|gb|EKV66633.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae VA360]
gi|427538860|emb|CCM95068.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 608
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II L GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--VRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R +V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|288937759|ref|YP_003441818.1| ATP-dependent DNA helicase RecQ [Klebsiella variicola At-22]
gi|288892468|gb|ADC60786.1| ATP-dependent DNA helicase RecQ [Klebsiella variicola At-22]
Length = 608
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVMGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--VRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPKIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|343501055|ref|ZP_08738938.1| ATP-dependent DNA helicase RecQ [Vibrio tubiashii ATCC 19109]
gi|418477793|ref|ZP_13046915.1| ATP-dependent DNA helicase RecQ [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342819043|gb|EGU53890.1| ATP-dependent DNA helicase RecQ [Vibrio tubiashii ATCC 19109]
gi|384574570|gb|EIF05035.1| ATP-dependent DNA helicase RecQ [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 612
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 237/355 (66%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQE+I + ++G+D LVIM GGGKSLCYQ+PA+ REG+ LVVSPL+SL+
Sbjct: 23 DVFGYQSFRDGQQEVIESAVAGQDSLVIMPTGGGKSLCYQIPALAREGLTLVVSPLISLM 82
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 83 KDQVDQLKANGVAAECVNSTMPREELISVYNRMHSGA--LKLVYVSPERVLM-RDFIERL 139
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y +LG LK FP +P+MALTATA + D
Sbjct: 140 ENI----SLSMIAVDEAHCISQWGHDFRPEYASLGQLKQHFPHIPVMALTATADDATRKD 195
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+M+ L + + ++ + +RPN+ Y + EK + ++ ++++ GI+YC S
Sbjct: 196 IMQRLQLDEPHTYLGSFDRPNIRYTLVEKHKP----VSQVVRFLEGQ--RGSCGIIYCGS 249
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L G+ A YHA ++ + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 250 RKKVEMVTEKLCNNGLRAASYHAGLEADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 309
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 310 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 364
>gi|425078981|ref|ZP_18482083.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425084628|ref|ZP_18487721.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405589261|gb|EKB62831.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405608866|gb|EKB81789.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 608
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II L GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--VRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRIPQIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R +V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|423123017|ref|ZP_17110701.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5246]
gi|376391770|gb|EHT04440.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5246]
Length = 608
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 230/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V FG +R Q+ II+ L GRD LV+M GGGKSLCYQ+PA++ G+ +VVS
Sbjct: 13 AKQVLQETFGYQQFRPGQETIIDTALGGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--IRLLYIAPERLMLDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTATA
Sbjct: 131 -FLEHLSHWN----LAMVAVDEAHCISQWGHDFRPEYAALGQLRQRVPQIPFMALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+ +SG
Sbjct: 186 DTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGISA YHA ++ + R V ++ ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRSKVEDTAARLQSRGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|419765474|ref|ZP_14291711.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741738|gb|EJK88959.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 608
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 232/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II L GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--VRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R +V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|437817959|ref|ZP_20842843.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435308090|gb|ELO83099.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
Length = 609
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +
Sbjct: 10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + +S+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ R V ++ + LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQCDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|255542856|ref|XP_002512491.1| DNA helicase hus2, putative [Ricinus communis]
gi|223548452|gb|EEF49943.1| DNA helicase hus2, putative [Ricinus communis]
Length = 586
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 224/348 (64%), Gaps = 6/348 (1%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
+FG ++R Q + A ++ RD V+M GGGKSLCYQLPA L+ G+ +VVSPLLSLIQ
Sbjct: 200 IFGNMSFRPLQHQACKASVAKRDCFVLMPTGGGKSLCYQLPATLKPGVTVVVSPLLSLIQ 259
Query: 146 DQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
DQ++ L GIPA L S + + + L K + K+LYVTPE+I+ + F+ L
Sbjct: 260 DQIITLNLKFGIPATFLNSQQTASQAAAVLQELRKDKPSCKLLYVTPERIAGNLGFLEIL 319
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ H G+L+ +DEAHC SQWGHDFRPDY+ LG LK F DVP++ALTATAT V+ D
Sbjct: 320 KCLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGCLKQNFRDVPLVALTATATHSVRED 379
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L I + ++ +RPNL Y V K+ K + ++ + +++ + N + GIVYC S
Sbjct: 380 ILKALRIPNALVLETSFDRPNLKYEVIGKT---KESLKQVGQLLKDRFKN-QCGIVYCLS 435
Query: 325 RKECEQVAQELRQRG-ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383
+ EC +V+ L + I YYHA + R +V +W + ++ T+AFGMGI+KPD
Sbjct: 436 KNECIEVSNFLNDKCKIKTVYYHAGLATRQRVEVQRKWHMGEAHIVCATIAFGMGIDKPD 495
Query: 384 VRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
VRFVIH++LSKS+E+YYQESGRAGRD LP+ C+ ++ D R M+
Sbjct: 496 VRFVIHNTLSKSIESYYQESGRAGRDNLPAACIALYQKKDFSRVVCML 543
>gi|421781133|ref|ZP_16217606.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica A30]
gi|407756805|gb|EKF66915.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica A30]
Length = 610
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 231/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA + G D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 13 AEQVLRDTFGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A ST ++E + + G+ +KMLY+ PE++
Sbjct: 73 PLISLMKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRSGQ--IKMLYIAPERLMMDS 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L+ C A L+++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA
Sbjct: 131 -FLDLLDHCPPA----LLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + +S+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 186 ESTRGDIVRLLALHDPLVQISSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D + R +V + ++ LQV+V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTTARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADM 345
>gi|172036703|ref|YP_001803204.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|354554517|ref|ZP_08973821.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
gi|171698157|gb|ACB51138.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|353553326|gb|EHC22718.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
Length = 711
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/345 (46%), Positives = 232/345 (67%), Gaps = 9/345 (2%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R+ Q++IIN L+ +D+LVIM GGGKSLC+QLPA+L+ G+ +VVSPL++L+QD
Sbjct: 16 FGYDQFRSGQKQIINEALNNKDLLVIMPTGGGKSLCFQLPALLKSGVCIVVSPLIALMQD 75
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L GI A L ST ++E+ + A+ KG+ +K+LYV PE++ F++ L+
Sbjct: 76 QVDTLLDNGIGATFLNSTLNREELQSRENAILKGK--IKLLYVAPERLLNDN-FLNFLDF 132
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
LS +IDEAHC S WGHDFRP+Y+ L L+ ++P VPM ALTATAT++V+ D++
Sbjct: 133 LRQKVGLSGFAIDEAHCVSAWGHDFRPEYRQLKQLRFRYPQVPMFALTATATKRVRADII 192
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
E L ++ V++ +RPNL+Y V+EKS + ++ Y++ SGI+YC SRK
Sbjct: 193 EQLGLQNPTVHVASFDRPNLYYEVQEKS---RRSYTQLLNYVRSQ---EGSGIIYCLSRK 246
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
E +A L+Q GI A YHA M + R R+ ++ +++IV T+AFGMGINKPDVRF
Sbjct: 247 NVETIAFRLQQDGIEALPYHAGMYDDERAVNQTRFIRDDVRIIVATIAFGMGINKPDVRF 306
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
V+H+ L +++E+YYQESGRAGRDG P+ C LFF D+ R ++
Sbjct: 307 VVHYDLPRNLESYYQESGRAGRDGEPANCALFFSFGDLKRLEYLI 351
>gi|90407207|ref|ZP_01215394.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
gi|90311630|gb|EAS39728.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
Length = 602
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 241/355 (67%), Gaps = 13/355 (3%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+ A+ + + FG ++RA Q+E+I + +G+D LV+M GGGKSLC+Q+PA+++ GI +V
Sbjct: 7 ASAEQILFDCFGYKSFRAGQKEVIEQLCAGKDALVVMPTGGGKSLCFQIPALIQPGICIV 66
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
+SPL+SL++DQV L G+ A L S+ S + I + +G+LK+LY+ PE++ +
Sbjct: 67 ISPLISLMKDQVDTLQTCGVAAAYLNSSLSYPQQNQILNDMH--QGKLKLLYIAPERLLR 124
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
FM +L+ ++L +IDEAHC SQWGHDFRP+Y LG LK FP VP++ALTAT
Sbjct: 125 HD-FMQRLKTL----TINLFAIDEAHCISQWGHDFRPEYALLGQLKIHFPQVPLVALTAT 179
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A Q D++ L + + + +RPN+ Y++ EK + ++ Y+ E E
Sbjct: 180 ADHATQKDILARLQFNDPLLSIHSFDRPNIEYLLIEKYRP----LIQLFNYLAEH--QHE 233
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
SGI+YC SR+ E++AQ+L+ +G++A YHA ++++ R+ V ++ K+++ ++V TVAFG
Sbjct: 234 SGIIYCTSRRRTEEIAQKLQGKGLNARCYHAGLELSERQLVQDKFIKDEVDIVVATVAFG 293
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
MGI+KP+VRFV+H+ + K++E+YYQE+GRAGRDGLP++ +LF+ PAD R +M+
Sbjct: 294 MGIDKPNVRFVVHYEIPKNIESYYQETGRAGRDGLPAQAMLFYDPADPARVRAML 348
>gi|329955315|ref|ZP_08296223.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
gi|328525718|gb|EGF52742.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
Length = 604
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 171/372 (45%), Positives = 242/372 (65%), Gaps = 27/372 (7%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R Q+EII +L G D LV+M GGGKS+CYQLPA+LREG A+VVSPL+SL++D
Sbjct: 9 FGYDSFRPLQEEIIRHILDGNDALVLMPTGGGKSICYQLPALLREGTAVVVSPLISLMKD 68
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L A GI A L S+ + + + +A EG+LK+LY++PEK+ ++ L
Sbjct: 69 QVEALCANGISAGALNSSNDETENAALRRACT--EGKLKLLYISPEKLLAEANYL--LRD 124
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H +SL +IDEAHC SQWGHDFRP+Y +GIL QFP VP++ALTATA + + D++
Sbjct: 125 MH----ISLFAIDEAHCISQWGHDFRPEYTQMGILHRQFPQVPIIALTATADKITREDII 180
Query: 267 EMLHIRKCIKFVSTINRPNLF------YMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
LH+ F+S+ +RPNL Y +EKS K ++D IA++ ESGI+
Sbjct: 181 RQLHLNHPRIFISSFDRPNLSLTVKRGYRQKEKS---KTILDFIARH------PGESGII 231
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC SR + E VAQ L+++GI YHA + R++ + +++QV+ T+AFGMGI+
Sbjct: 232 YCMSRSKTESVAQMLQKQGIRTAVYHAGLSPARRDEAQDDFINDRVQVVCATIAFGMGID 291
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ- 439
K +VR+VIH++L KS+E++YQE GRAGRDGLPS+ LLF+ AD+ + F +SG +
Sbjct: 292 KSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADLILLTK--FATDSGQEG 349
Query: 440 -NLYDIVRYSQY 450
NL + R QY
Sbjct: 350 INLEKLQRMQQY 361
>gi|270264266|ref|ZP_06192533.1| ATP-dependent DNA helicase RecQ [Serratia odorifera 4Rx13]
gi|270041915|gb|EFA15012.1| ATP-dependent DNA helicase RecQ [Serratia odorifera 4Rx13]
Length = 612
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 231/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ IINA + G D LV+M GGGKSLCYQ+PA++ +G+ LVVS
Sbjct: 15 AEQVLRDTFGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVS 74
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A ST ++E + + G+ +KMLY+ PE++
Sbjct: 75 PLISLMKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRSGQ--IKMLYIAPERLMMDS 132
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L+ C A L+++DEAHC SQWGHDFRP+Y+ LG LK +FP +P++ALTATA
Sbjct: 133 -FLDLLDHCPPA----LLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATAD 187
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ + D++ +L + + +S+ +RPN+ Y + EK +D++ +++Q+ +SG
Sbjct: 188 ESTRGDIVRLLALHDPLVQISSFDRPNIRYTLVEKFKP----LDQLWRFVQDQ--RGKSG 241
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E L+ RG+S YHA +D + R +V + ++ LQV+V TVAFGMG
Sbjct: 242 IIYCNSRAKVEDTTARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMG 301
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +L + PAD+
Sbjct: 302 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADM 347
>gi|227114714|ref|ZP_03828370.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|403060389|ref|YP_006648606.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402807715|gb|AFR05353.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 608
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 232/340 (68%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEII+A LSG+D LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST ++E + + G+ +K+LY+ PE+++ + F+ L
Sbjct: 79 KDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTGQ--IKLLYIAPERLT-TDSFLDHL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+++LI++DEAHC SQWGHDFRP+Y+ LG +K +FP +P +ALTATA + +ND
Sbjct: 136 AHW----QIALIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRND 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L ++ + +S+ +RPN+ Y + EK +D++ ++Q +SGI+YC S
Sbjct: 192 IVRLLDLQSPLIQISSFDRPNIRYTLVEKFKP----LDQLWMFVQGQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R E + L+ RG+SA YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RSRVEDICARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGL +E LF+ PAD+
Sbjct: 306 RFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADM 345
>gi|194735447|ref|YP_002116885.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194710949|gb|ACF90170.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
Length = 615
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 226/339 (66%), Gaps = 13/339 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG +R Q+ II+ LSGRD LV+M GGGKSLCYQ+PA+L +G+ +VVSPL+SL++
Sbjct: 26 TFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMK 85
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A L ST S+E + + G+ +++LY+ PE++ F+ L
Sbjct: 86 DQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQ--IRLLYIAPERLMLDN-FLDHLA 142
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTATA + D+
Sbjct: 143 HWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQDI 198
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ L + + +S+ +RPN+ YM+ EK +D++ +Y+QE +SGI+YC SR
Sbjct: 199 IRQLGLNDPLIQISSFDRPNIRYMLMEKFKP----LDQLMRYVQEQ--RGKSGIIYCNSR 252
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ E A L+ RGISA YHA ++ R V ++ ++ LQ++V TVAFGMGINKP+VR
Sbjct: 253 AKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGINKPNVR 312
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 313 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 351
>gi|163751804|ref|ZP_02159020.1| ATP-dependent DNA helicase RecQ [Shewanella benthica KT99]
gi|161328289|gb|EDP99450.1| ATP-dependent DNA helicase RecQ [Shewanella benthica KT99]
Length = 610
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 234/355 (65%), Gaps = 14/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R Q+E+I + +G D LVIM GGGKSLCYQLPA+ G+ +VVSPL+SL+
Sbjct: 21 SVFGYRTFRKGQREVIEQICAGIDCLVIMPTGGGKSLCYQLPALQMPGLTIVVSPLISLM 80
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L +G+ A L S+ + E+ I + E GELK+LYV+PE++ ++ F+ +L
Sbjct: 81 KDQVDSLQQMGVNAGYLNSSQAGEERARILR--EMHSGELKLLYVSPERLLQAS-FIERL 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ H +SL +IDEAHC SQWGHDFRP+Y LG L+ FP VP+MALTATA Q + D
Sbjct: 138 HELH----ISLFAIDEAHCISQWGHDFRPEYAALGRLRQYFPHVPIMALTATADQATRQD 193
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ + L I F+++ +RPN+ Y V EK + +++ +++ N SGI+YC S
Sbjct: 194 ICQRLTITP-FSFLTSFDRPNIRYTVAEKLNAA----NQLRQFVTAQ--NGSSGIIYCGS 246
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R+ ++VA+ LR +G +AD YHA R V R+ K++L ++V TVAFGMGINK +V
Sbjct: 247 RRRVDEVAERLRLQGHNADAYHAGRTQEERTDVQDRFLKDQLDIVVATVAFGMGINKSNV 306
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
R+V+H+ + KSVE+YYQE+GRAGRDGL +E L+ F PAD+ R ++ G Q
Sbjct: 307 RYVVHYDIPKSVESYYQETGRAGRDGLDAEALMLFDPADIGRVRHLIEQSEPGPQ 361
>gi|50288805|ref|XP_446832.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526141|emb|CAG59763.1| unnamed protein product [Candida glabrata]
Length = 718
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 184/502 (36%), Positives = 287/502 (57%), Gaps = 57/502 (11%)
Query: 75 WDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR---- 130
WD + ++ F + +R +Q +IIN+ L G+ V V+M GGGKSLCYQLP+++
Sbjct: 84 WDKQVQNILKCTFHMEQFRGSQIDIINSTLQGKHVFVLMCTGGGKSLCYQLPSLVTLGYT 143
Query: 131 EGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVT 190
+G +V+SPL+SL+ DQV L + I A ML+ST+S + + + L EG+L + Y++
Sbjct: 144 KGTTIVISPLISLMHDQVEALISKRIKACMLSSTSSSKQKTMALQLL--SEGKLNLFYIS 201
Query: 191 PEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPM 250
PE + S + + + RL+ + IDEAHC S WGHDFRP+YK LG L +F VP+
Sbjct: 202 PEMVMGSSPCKGIIRRLYRQNRLARLVIDEAHCISSWGHDFRPEYKKLGQLTKEFDGVPV 261
Query: 251 MALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQE 310
MALTATA +Q D++++L+++ + F ++NR NL+Y V +K+S + + E Y+ +
Sbjct: 262 MALTATANDNIQEDILKILNLKNVVVFKDSLNRKNLYYEVVQKNS--RTI--EYMTYLLK 317
Query: 311 SYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIV 370
+ + +SGI+YC S+ CE+V++EL Q IS+++YHA N+R +W + +QV+
Sbjct: 318 TEFHGQSGIIYCNSKASCEKVSKELNQANISSEFYHAGKTANSRLNTQRKWQQGTIQVVC 377
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSM 430
T+AFGMGI+K +VRFV H+ + +S+E YYQE+GRAGRDG PS+C+LFF DV R +
Sbjct: 378 ATIAFGMGIDKENVRFVFHYDIPRSMEGYYQETGRAGRDGNPSKCILFFCLQDVNRLQIL 437
Query: 431 VFYEN-------SGLQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLF---CMVV--- 477
+ EN L+ L D++ Y H ++ RL I E + F CM
Sbjct: 438 IQRENVSALQKEHNLKKLQDVLVYC----HNKVDCRRLQILEYFNE-EFFPSNCMKTCDN 492
Query: 478 -------------LAGHAQCIISLLQDIQDNNQRLTMLQLVD------KMKIKLKEIDS- 517
+A+ I+SLL+ + N+R+T Q D MK + D+
Sbjct: 493 CKNIGVSTIEQKDFTHYAKQILSLLRKL--GNERITTNQCQDIFRGSNNMKTRFSGYDNF 550
Query: 518 -------DLKREEIEQLVLQLI 532
DL + E ++L + L+
Sbjct: 551 EEHGSGKDLTKSETDRLFVHLL 572
>gi|281206277|gb|EFA80466.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 842
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 224/353 (63%), Gaps = 3/353 (0%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
F WD + VFG R Q + IN+VL RD V + GGGKSLC+QLPA++ G
Sbjct: 375 FPWDRFVEGCNRLVFGNERLRPLQSDAINSVLYRRDTFVSLPTGGGKSLCFQLPAIIDSG 434
Query: 133 IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTS-KEDEKFIYKALEKGEGELKMLYVTP 191
+ LV+SPLL+L+ DQ+ L LG+P L S+ E +K I + L+ K+LYVTP
Sbjct: 435 VTLVISPLLALMFDQLSKLLQLGVPTCALNSSVPVSEKKKIIKELLDPAGCPYKLLYVTP 494
Query: 192 EKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMM 251
E++ K++ F+ LE ++ +L + IDEAHC S+WGHDFR DY+ L + FP++P++
Sbjct: 495 ERM-KTQEFIDILEHLNNTSQLKRLVIDEAHCISEWGHDFRKDYRKLSKFREMFPNIPIV 553
Query: 252 ALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQES 311
ALTATAT KV+ D+ + L + I + R NL Y VR+KS+ + ++I ++ +
Sbjct: 554 ALTATATPKVELDIKQQLSMHNTINIRGSFIRSNLKYEVRKKSTEPEFCFNDIYHFVNRN 613
Query: 312 YPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVG 371
+ NS SGIVYC + ECE + + L RG+S D+YHA ++ R RW K +++
Sbjct: 614 HKNS-SGIVYCSTIAECESLCEYLTDRGLSVDFYHASLNAAQRVDTQERWITGKFKIVCT 672
Query: 372 TVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
T+AFGMGI+KPD RFVIHHS+ S+E+YYQ++GRAGRDG S+C+L++ D+
Sbjct: 673 TIAFGMGIDKPDTRFVIHHSIPSSIESYYQQTGRAGRDGKLSDCILYYNKNDI 725
>gi|119899607|ref|YP_934820.1| ATP-dependent DNA helicase [Azoarcus sp. BH72]
gi|119672020|emb|CAL95934.1| ATP-dependent DNA helicase [Azoarcus sp. BH72]
Length = 615
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/347 (44%), Positives = 231/347 (66%), Gaps = 8/347 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG A+R QQ I+ V +G D LV+M GGGKSLCYQ+PA+LREG A+VVSPL++L+
Sbjct: 22 HVFGYTAFRGEQQAIVEHVAAGGDALVLMPTGGGKSLCYQVPALLREGTAIVVSPLIALM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
DQV L G+ A L S+ E+ + + +AL GE L +LYV PE++ + RF+ +L
Sbjct: 82 HDQVSALVEAGVKAAFLNSSLDAEEARRVERALYAGE--LDLLYVAPERL-MTPRFLDQL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ RL+L +IDEAHC SQWGHDFRP+Y L IL ++P +P +ALTATA ++ + +
Sbjct: 139 DHLRDTHRLALFAIDEAHCVSQWGHDFRPEYLQLSILPERYPAIPRIALTATADRQTREE 198
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ L + +F+S+ +RPN+ Y + +K + ++ +I+E +P SE+G+VYC S
Sbjct: 199 IATRLRLEDARRFISSFDRPNIRYTIVDKDDPRR----QLLHFIREEFP-SEAGVVYCLS 253
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R++ E+ A L+++GI+A YHA + + R + R+ + V+V T+AFGMGI+KPDV
Sbjct: 254 RRKVEETAAWLQEQGINALPYHAGLGQDVRAEHQTRFLREDGIVMVATIAFGMGIDKPDV 313
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
RFV H L +S+E YYQE+GRAGRDGLP++ + + DV +Q M+
Sbjct: 314 RFVAHLDLPRSIEGYYQETGRAGRDGLPAQAWMAWGAQDVVQQRRMI 360
>gi|118579582|ref|YP_900832.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
gi|118502292|gb|ABK98774.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
Length = 714
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 166/373 (44%), Positives = 239/373 (64%), Gaps = 23/373 (6%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+I V++G DV ++M GGGKSLCYQ+PA+ REG+A+VVSPL+SL+
Sbjct: 11 SVFGYGSFRPPQREVIQRVVAGEDVFLVMPTGGGKSLCYQIPALHREGVAIVVSPLISLM 70
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L G+ A S+ + E+ + + + L +GEL +LYV PE++ F+ +L
Sbjct: 71 KDQVDGLVDAGVRAACYNSSLTAEESRAVSRQL--AQGELDLLYVAPERLLLPD-FLERL 127
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+L+L +IDEAHC SQWGHDFRPDY LG L+ FP VP++A+TATA + + D
Sbjct: 128 GGL----KLALFAIDEAHCISQWGHDFRPDYVKLGRLRELFPSVPIVAMTATADPETRRD 183
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L I + FV+ +RPN+ Y V K ++++ +++ ESGIVY S
Sbjct: 184 IIRQLGIERATLFVAGFDRPNITYAVIPKQKP----VNQLLSFLKGR--GDESGIVYALS 237
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK EQV + L+Q G A YHA + R +V + ++ L+V+V TVAFGMGI+KP+V
Sbjct: 238 RKRVEQVTERLQQAGFDAAAYHAGLPDRERSRVQDAFRRDDLRVVVATVAFGMGIDKPNV 297
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG------- 437
RFV+H+ L KSVE+YYQE+GRAGRDGLPS+ L+ F DV S++ ENS
Sbjct: 298 RFVVHYDLPKSVESYYQETGRAGRDGLPSQALMLFGMGDVMTARSLI--ENSDNAERVRI 355
Query: 438 -LQNLYDIVRYSQ 449
LQ L +V Y++
Sbjct: 356 ELQKLNAMVSYAE 368
>gi|417951017|ref|ZP_12594128.1| ATP-dependent DNA helicase RecQ [Vibrio splendidus ATCC 33789]
gi|342805457|gb|EGU40720.1| ATP-dependent DNA helicase RecQ [Vibrio splendidus ATCC 33789]
Length = 612
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 232/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A ++ +VFG ++R QQE+I+ + GRD LVIM GGGKSLCYQ+PA++REG+ LV+S
Sbjct: 17 AQNILEDVFGYQSFRDGQQEVIDLAVQGRDSLVIMPTGGGKSLCYQIPALVREGLTLVIS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A + S+ ++ ++ + G+ LKM+YV+PE++ +
Sbjct: 77 PLISLMKDQVDQLKANGVAAECINSSMPRDQLLSVFNRMNSGQ--LKMVYVSPERVLM-R 133
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L+ LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP MALTATA
Sbjct: 134 DFIERLQGLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPYMALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L + ++ + +RPN+ Y + EK + ++ +Y++ N G
Sbjct: 190 DATRKDIVSRLQLVDPHTYLGSFDRPNIRYNLVEKHKP----VSQVVRYLETQKGNC--G 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SRK+ E V ++L GI A YHA MD + R V + ++ +Q++V TVAFGMG
Sbjct: 244 IIYCGSRKKVEMVTEKLCNNGIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ F PAD+
Sbjct: 304 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADM 349
>gi|221040662|dbj|BAH12008.1| unnamed protein product [Homo sapiens]
Length = 1047
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 228/385 (59%), Gaps = 40/385 (10%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ +R NQ E INA L G D ++M GGGKSLCYQLPA + G+ +V+SPL SLI D
Sbjct: 316 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 375
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L +L IPA LT + + IY L K + +K+LYVTPEKI S R +S LE
Sbjct: 376 QVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLEN 435
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ L+ IDEAHC SQWGHDFR DYK + +L+ +FP VP+MALTATA +VQ D++
Sbjct: 436 LYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL 495
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L I + F + NR NL Y V K KV D + ++I++ +P +SGI+YC SR+
Sbjct: 496 TQLKILRPQVFSMSFNRHNLKYYVLPKKP-KKVAFDCL-EWIRKHHP-YDSGIIYCLSRR 552
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRW-SKNKLQVIVGTVAFGMGINKPDVR 385
EC+ +A L+ +W +++ QVI T+AFGMGI+KPDVR
Sbjct: 553 ECDTMADTLQ-----------------------KWINQDGCQVICATIAFGMGIDKPDVR 589
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG-------- 437
FVIH SL KSVE YYQESGRAGRDG S CLLF+ DV R ++ E G
Sbjct: 590 FVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH 649
Query: 438 LQNLYDIVRYSQYPLHWNIEKVRLV 462
NLY +V Y + NI + R +
Sbjct: 650 FNNLYSMVHYCE-----NITECRRI 669
>gi|300721460|ref|YP_003710735.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
gi|297627952|emb|CBJ88501.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
Length = 608
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/348 (44%), Positives = 240/348 (68%), Gaps = 13/348 (3%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A+ FG +R QQ++I+AVL G D LV+M GGGKSLCYQ+PA++++G+ LV
Sbjct: 11 SLAEQTLRKTFGYQQFRPGQQQVIDAVLDGLDCLVVMPTGGGKSLCYQIPALVKDGLTLV 70
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
VSPL+SL++DQV L A G+ A L ST S+E + I + +G +K+LY+ PE++
Sbjct: 71 VSPLISLMKDQVDQLRANGVEAECLNSTQSREQQFDIIQRCR--QGSIKLLYIAPERLV- 127
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
+ F+ +L H R ++++DEAHC SQWGHDFRP+Y+ LG L+ +FP++P++ALTAT
Sbjct: 128 TDNFLEQL----HDWRPVVLAVDEAHCISQWGHDFRPEYRALGQLRRRFPNLPVIALTAT 183
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A + D++ +L + + I +S+ +RPN+ Y + EK +D++ +++ +
Sbjct: 184 ADNTTRQDIVRLLELHEPIIHLSSFDRPNIRYTLVEKYKP----LDQLWSFVRAQ--QGK 237
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
SGI+YC SR + E+ A+ L++RG+S YHA ++ + R V + ++ LQ++V TVAFG
Sbjct: 238 SGIIYCNSRTKVEETAERLQKRGLSVAPYHAGLENDQRAWVQDAFQRDDLQIVVATVAFG 297
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
MGINKP+VRFV+H ++ +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 298 MGINKPNVRFVVHFNIPRNIESYYQETGRAGRDGLPAEAVLFYDPADM 345
>gi|149191369|ref|ZP_01869621.1| ATP-dependent DNA helicase RecQ [Vibrio shilonii AK1]
gi|148834786|gb|EDL51771.1| ATP-dependent DNA helicase RecQ [Vibrio shilonii AK1]
Length = 611
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 230/340 (67%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQE+I++ + G D LVIM GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 22 SVFGYQEFRPGQQEVIDSAIEGNDGLVIMPTGGGKSLCYQIPALVRSGITLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST SKE IY+ + G+ LK++YV+PE++ F+ +L
Sbjct: 82 KDQVDQLKADGVAAECINSTQSKETLIDIYRRMNNGQ--LKLIYVSPERVLMHD-FIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK FP VPM+ALTATA + D
Sbjct: 139 EHL----ELSMIAVDEAHCISQWGHDFRPEYAALGRLKEWFPFVPMVALTATADDATRKD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L++ +++ + +RPN+ Y + EK + +I +++ E+ SGI+YC S
Sbjct: 195 IIHRLNLNNPHEYLGSFDRPNIRYTLVEKHKP----VSQIVRFLGEN--KGGSGIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E + ++L + A YHA MD++ R V + ++ +QV+V TVAFGMGINKP+V
Sbjct: 249 RKKVEMLTEKLCANHVRAAGYHAGMDMDERAYVQDAFQRDDIQVVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 309 RFVAHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADI 348
>gi|325579297|ref|ZP_08149253.1| ATP-dependent helicase RecQ [Haemophilus parainfluenzae ATCC 33392]
gi|325159532|gb|EGC71666.1| ATP-dependent helicase RecQ [Haemophilus parainfluenzae ATCC 33392]
Length = 621
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 228/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+I+A LSG+D LV+MA G GKSLCYQ+PA+ G+ LV+SPL+SL+
Sbjct: 24 SVFGYQSFRKGQEEVIHAALSGQDALVVMATGNGKSLCYQIPALCFPGLTLVISPLISLM 83
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+ LK+LY++PEK+ + F
Sbjct: 84 KDQVDQLQANGIEADFLNSSQTPEQQQQVENKLISGQ--LKLLYISPEKVMTNSFF---- 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+ P+MALTATA + D
Sbjct: 138 -QLISYAQISFIAIDEAHCISQWGHDFRPEYTQLGGLKAAFPNAPIMALTATADYATRQD 196
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + K++ + +RPN+ Y + EK ++++ +++ +SGIVYC S
Sbjct: 197 ILTHLKLDHPHKYIGSFDRPNIRYTLEEKFKP----MEQLTRFVLAQ--KGKSGIVYCNS 250
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE V + ++ +QV+V T+AFGMGINK +V
Sbjct: 251 RSKVERIAEILRNKGVSAAAYHAGMETALRECVQQDFQRDNIQVVVATIAFGMGINKSNV 310
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 311 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 349
>gi|113476788|ref|YP_722849.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
gi|110167836|gb|ABG52376.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
Length = 731
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 230/339 (67%), Gaps = 7/339 (2%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
N FG ++R Q++II L +D+L+IM GGGKSLC+Q+PA+L+ G+ +VVSPL+SL+
Sbjct: 20 NYFGYDSFRPGQKQIIQTALQQKDLLIIMPTGGGKSLCFQMPALLKPGLTIVVSPLISLM 79
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L GI A L ST + + ++ + G++K+LYV PE++ S++F+ L
Sbjct: 80 QDQVESLKDNGIAATFLNSTLDLTETR--RRSTDIILGKIKLLYVAPERLL-SEKFLEFL 136
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E +S +IDEAHC S+WGHDFRP+Y+ L +L+ +PDVP+MALTATAT++V+ D
Sbjct: 137 ELISSQQGISTFAIDEAHCVSEWGHDFRPEYRQLKLLRETYPDVPIMALTATATKRVRED 196
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ L+++K +++ R NL+Y VR+K+S K EI + I+ SGIVYC S
Sbjct: 197 ITTQLNLQKPYIHIASFFRSNLYYEVRQKTS-AKNTFAEILQIIRTI---GGSGIVYCNS 252
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK +++A +LRQ +SA YHA M R ++ ++ + VIV TVAFGMGI+KPDV
Sbjct: 253 RKRVDEIAYKLRQNNVSALAYHAGMTDEERTTNQTKFIRDDVDVIVATVAFGMGIDKPDV 312
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFVIH+ LSK++E YYQE+GR+GRDG P++C+LFF D
Sbjct: 313 RFVIHYDLSKNIEGYYQETGRSGRDGEPAQCILFFSYGD 351
>gi|378775278|ref|YP_005177521.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida 36950]
gi|356597826|gb|AET16552.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida 36950]
Length = 632
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 233/345 (67%), Gaps = 13/345 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A D+ VFG ++R Q+E+I+A L G+D LVIMA G GKSLCYQ+PA+ EG+ LV+S
Sbjct: 26 ALDMLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVIS 85
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A GI A L S+ + +++ + L G LK+LYV+PEK+ +
Sbjct: 86 PLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLM--SGTLKLLYVSPEKVMTTS 143
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F + C ++S ++IDEAHC SQWGHDFRP+Y LG LK+ FP P+MALTATA
Sbjct: 144 -FFHLISHC----KVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATAD 198
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L+++ ++ + +RPN+ Y + EK ++++ +++ +SG
Sbjct: 199 HATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKP----MEQLCRFVLGQ--KGKSG 252
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E++A+ LR +G+SA YHA ++ RE+V + ++ +QV+V T+AFGMG
Sbjct: 253 IIYCNSRSKVERIAESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMG 312
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
INK +VRFV+H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 313 INKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 357
>gi|224123710|ref|XP_002330189.1| predicted protein [Populus trichocarpa]
gi|222871645|gb|EEF08776.1| predicted protein [Populus trichocarpa]
Length = 588
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 226/357 (63%), Gaps = 9/357 (2%)
Query: 80 DDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
DD L +FG +R Q + A ++ +D V+M GGGKSLCYQLPA L+ G+ +V
Sbjct: 172 DDFELANVVIFGNKTFRPLQHQACKATVAKQDCFVLMPTGGGKSLCYQLPATLKPGVTVV 231
Query: 137 VSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
+SPLLSLIQDQ++ L GIPA L S + I + L + K+LYVTPE+I+
Sbjct: 232 ISPLLSLIQDQIITLNLKFGIPATFLNSQQTSAQAAAILQELRHDKPSCKLLYVTPERIA 291
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F+ L+ H G+L+ +DEAHC SQWGHDFRPDYK LG LK FP VP+MALTA
Sbjct: 292 GNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFRPDYKRLGCLKQNFPVVPVMALTA 351
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TAT V+ D+++ L I + ++ +RPNL Y V K+ K + ++ +++ + N
Sbjct: 352 TATHSVREDILKTLRIPGALVLETSFDRPNLKYEVIGKT---KESLKQLGDLLRDRFKN- 407
Query: 316 ESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
+ GIVYC S+ EC +V++ L ++ I A YYHA + R V +W ++ ++ T+A
Sbjct: 408 QCGIVYCLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQRVDVQRKWHTGEVHIVCATIA 467
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
FGMGI+KPDVRFVIH++LSKS+E+YYQESGRAGRD P+ C+ ++ D R M+
Sbjct: 468 FGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDSHPATCIALYQKKDFSRVVCML 524
>gi|148978460|ref|ZP_01814934.1| ATP-dependent DNA helicase RecQ [Vibrionales bacterium SWAT-3]
gi|145962367|gb|EDK27647.1| ATP-dependent DNA helicase RecQ [Vibrionales bacterium SWAT-3]
Length = 612
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 232/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A ++ +VFG ++R QQE+I+ + GRD LVIM GGGKSLCYQ+PA++REG+ LV+S
Sbjct: 17 AQNILEDVFGYQSFRDGQQEVIDLAVQGRDSLVIMPTGGGKSLCYQIPALVREGLTLVIS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A + S+ ++ ++ + G+ LKM+YV+PE++ +
Sbjct: 77 PLISLMKDQVDQLKANGVAAECINSSMPRDQLLSVFNRMNSGQ--LKMVYVSPERVLM-R 133
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L+ LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP MALTATA
Sbjct: 134 DFIERLQGLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPYMALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L + ++ + +RPN+ Y + EK + ++ +Y++ N G
Sbjct: 190 DATRKDIVSRLQLVDPHTYLGSFDRPNIRYNLVEKHKP----VSQVVRYLETQKGNC--G 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SRK+ E V ++L GI A YHA MD + R V + ++ +Q++V TVAFGMG
Sbjct: 244 IIYCGSRKKVEMVTEKLCNNGIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ F PAD+
Sbjct: 304 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADM 349
>gi|345429420|ref|YP_004822538.1| ATP-dependent DNA helicase [Haemophilus parainfluenzae T3T1]
gi|301155481|emb|CBW14947.1| ATP-dependent DNA helicase [Haemophilus parainfluenzae T3T1]
Length = 621
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 228/339 (67%), Gaps = 13/339 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q+E+I+A LSG+D LV+MA G GKSLCYQ+PA+ G+ LV+SPL+SL+
Sbjct: 24 SVFGYQSFRKGQEEVIHAALSGQDALVVMATGNGKSLCYQIPALCFPGLTLVISPLISLM 83
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A GI A L S+ + E ++ + L G+ LK+LYV+PEK+ + F
Sbjct: 84 KDQVDQLQANGIEADFLNSSQTPEQQQQVENKLISGQ--LKLLYVSPEKVMTNSFF---- 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+ P+MALTATA + D
Sbjct: 138 -QLISYAQISFIAIDEAHCISQWGHDFRPEYTQLGGLKAAFPNAPIMALTATADYATRQD 196
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + K++ + +RPN+ Y + EK ++++ +++ +SGIVYC S
Sbjct: 197 ILTHLKLDHPHKYIGSFDRPNIRYTLEEKFKP----MEQLTRFVLAQ--KGKSGIVYCNS 250
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R + E++A+ LR +G+SA YHA M+ RE+V + ++ +QV+V T+AFGMGINK +V
Sbjct: 251 RSKVERIAETLRNKGVSAAAYHAGMETALRERVQQDFQRDNIQVVVATIAFGMGINKSNV 310
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
RFV H L +S+E+YYQE+GRAGRD LP+E +LF+ AD
Sbjct: 311 RFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYELAD 349
>gi|407072033|ref|ZP_11102871.1| ATP-dependent DNA helicase RecQ [Vibrio cyclitrophicus ZF14]
Length = 612
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 232/346 (67%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A ++ +VFG ++R QQE+I+ + G+D LVIM GGGKSLCYQ+PA++REG+ LV+S
Sbjct: 17 AQNILQDVFGYQSFRDGQQEVIDLAVEGKDSLVIMPTGGGKSLCYQIPALVREGLTLVIS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A + S+ +E K I G+LKM+YV+PE++ +
Sbjct: 77 PLISLMKDQVDQLKANGVAAECINSSMPRE--KLISVFNRMNSGQLKMVYVSPERVLM-R 133
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L+ LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP MALTATA
Sbjct: 134 DFIERLQGLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPYMALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L + + ++ + +RPN+ Y + EK + ++ +Y++ N G
Sbjct: 190 DATRKDIISRLQLVEPHTYLGSFDRPNIRYNLVEKHKP----VSQVVRYLETQKGNC--G 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SRK+ E V ++L G+ A YHA MD + R V + ++ +Q++V TVAFGMG
Sbjct: 244 IIYCGSRKKVEMVTEKLCNNGLRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ F PAD+
Sbjct: 304 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADM 349
>gi|170718152|ref|YP_001785180.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 2336]
gi|168826281|gb|ACA31652.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 2336]
Length = 624
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 233/348 (66%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S A D+ +VFG ++R Q E+I A L+ +D LVIMA GGGKSLCYQ+PA+ G+ LV
Sbjct: 23 STALDILHSVFGYQSFRKGQLEVIEATLAKKDSLVIMATGGGKSLCYQIPALCFSGLTLV 82
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIY-KALEKGEGELKMLYVTPEKIS 195
+SPL+SL++DQV L A GI A L S+ + E ++ + KA+ G+LK+LY++PEK +
Sbjct: 83 ISPLISLMKDQVDQLLANGINADYLNSSQTFEQQQLVQNKAMS---GKLKLLYISPEK-A 138
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F + C ++S I++DE HC SQWGHDFRP+Y LG LK FPD P+MALTA
Sbjct: 139 LTTSFFHFISHC----KVSFIAVDETHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTA 194
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA Q + D++ L + ++ + +RPN+ Y + EK +++++++I +
Sbjct: 195 TADQATRQDILIHLKLSNPHIYIGSFDRPNIRYSLVEKFKP----MEQLSQFIAKQ--KG 248
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
++GI+YC SR + E++A+ LRQ+GISA+ YHA M RE V + + +Q++V T+AF
Sbjct: 249 KNGIIYCNSRNKVERIAESLRQKGISAEAYHAGMSNEQREFVQRAFQHDNVQIVVATIAF 308
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV H L +S+E YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 309 GMGINKSNVRFVAHFDLPRSIEAYYQETGRAGRDDLPAEAVLFYEPAD 356
>gi|294142824|ref|YP_003558802.1| ATP-dependent DNA helicase RecQ [Shewanella violacea DSS12]
gi|293329293|dbj|BAJ04024.1| ATP-dependent DNA helicase RecQ [Shewanella violacea DSS12]
Length = 610
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 234/355 (65%), Gaps = 14/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R Q+E+I + +G D LVIM GGGKSLCYQLPA+ G+ +VVSPL+SL+
Sbjct: 21 SVFGYRTFRKGQREVIEQICAGVDCLVIMPTGGGKSLCYQLPALQMPGLTIVVSPLISLM 80
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L +G+ A L S+ + ++ I + E GELK+LYV+PE++ ++ F+ +L
Sbjct: 81 KDQVDSLQQMGVNAGYLNSSQAGQESARILR--EMHSGELKLLYVSPERLLQAS-FIDRL 137
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ H +SL +IDEAHC SQWGHDFRP+Y LG L+ FP VP+MALTATA Q + D
Sbjct: 138 HELH----ISLFAIDEAHCISQWGHDFRPEYAALGRLRQYFPHVPIMALTATADQATRQD 193
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ + L I F+++ +RPN+ Y V EK + +++ +++ N SGI+YC S
Sbjct: 194 ICQRLTITP-FSFLTSFDRPNIRYTVAEKLNAA----NQLRQFVTAQ--NGTSGIIYCGS 246
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R+ ++VA+ LR +G +AD YHA R V R+ K++L ++V TVAFGMGINK +V
Sbjct: 247 RRRVDEVAERLRLQGHNADSYHAGRTQEERADVQDRFLKDQLDIVVATVAFGMGINKSNV 306
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
R+V+H+ + KSVE+YYQE+GRAGRDGL SE L+ F PAD+ R ++ G Q
Sbjct: 307 RYVVHYDIPKSVESYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQSEPGPQ 361
>gi|407790669|ref|ZP_11137761.1| ATP-dependent DNA helicase RecQ [Gallaecimonas xiamenensis 3-C-1]
gi|407203006|gb|EKE72994.1| ATP-dependent DNA helicase RecQ [Gallaecimonas xiamenensis 3-C-1]
Length = 607
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 233/356 (65%), Gaps = 13/356 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
D V +VFG +R QQ +++AV++GRD LVIM GGGKSLCYQ+PA++ G A+
Sbjct: 12 DESPQSVLASVFGYDQFRPGQQAVVDAVVAGRDALVIMPTGGGKSLCYQVPALVLPGTAI 71
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
V+SPL+SL++DQV L A+G+ A L S ++ + + L GEL +LYV+PE++S
Sbjct: 72 VISPLISLMKDQVDQLLAMGVRAAYLNSALPRDQQWQVLNQLH--HGELDLLYVSPERLS 129
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F +L + +SL ++DEAHC S WGHDFRP+Y LG LK FP VP+MALTA
Sbjct: 130 QPD-FQQRLLEIP----ISLFAVDEAHCISSWGHDFRPEYMALGQLKRHFPQVPLMALTA 184
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + + D+ + L + +S+ +RPN+ Y+V EK I+++ +Y++
Sbjct: 185 TADKATRQDIQQRLGLDDPYFNLSSFDRPNIRYLVVEKFKP----INQLLQYLEGQ--RG 238
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+Y SRK + +AQ+LR +G +A YHA + + R+ V + K+++ ++V TVAF
Sbjct: 239 QSGIIYAGSRKRVDDIAQKLRGQGFNAAGYHAGLSNDERQFVQDAFQKDEVDIVVATVAF 298
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
GMGINKPDVRFV H L K++E+YYQE+GRAGRDGLPSE + F P DV R S++
Sbjct: 299 GMGINKPDVRFVAHFDLPKNIESYYQETGRAGRDGLPSEAWMLFEPGDVARVRSLI 354
>gi|425066310|ref|ZP_18469430.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida P1059]
gi|404381895|gb|EJZ78360.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida P1059]
Length = 632
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 232/345 (67%), Gaps = 13/345 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A DV VFG ++R Q+E+I+A L G+D LVIMA G GKSLCYQ+PA+ EG+ LV+S
Sbjct: 26 ALDVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVIS 85
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A GI A L S+ + +++ + L G LK+LYV+PEK+ +
Sbjct: 86 PLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLM--SGTLKLLYVSPEKVMTTS 143
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F + C ++S ++IDEAHC SQWGHDFRP+Y LG LK+ FP P+MALTATA
Sbjct: 144 -FFHLISHC----KVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATAD 198
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ L+++ ++ + +RPN+ Y + EK ++++ +++ +SG
Sbjct: 199 HATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKP----MEQLCRFVLGQ--KGKSG 252
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E++A+ LR +G+SA YHA + RE+V + ++ +QV+V T+AFGMG
Sbjct: 253 IIYCNSRSKVERIAESLRNKGVSAQAYHAGRETAQREQVQRAFQRDNVQVVVATIAFGMG 312
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
INK +VRFV+H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 313 INKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 357
>gi|359446850|ref|ZP_09236489.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
gi|358039322|dbj|GAA72738.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
Length = 607
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 237/341 (69%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q +I+A ++G+D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 22 VFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G +K+LYV PEK+ + + F+ +L
Sbjct: 82 DQVTQLQALGVKAAYINNSLAREEQQLVYQQLH--QGLIKLLYVAPEKVLQ-REFLERLS 138
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 139 HLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFTHVPMMALTATADKATRFDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E ++SGI+YC SR
Sbjct: 195 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KNQSGIIYCTSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A++L G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 249 KRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 309 FVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGR 349
>gi|300309830|ref|YP_003773922.1| ATP-dependent DNA helicase [Herbaspirillum seropedicae SmR1]
gi|300072615|gb|ADJ62014.1| ATP-dependent DNA helicase protein [Herbaspirillum seropedicae
SmR1]
Length = 618
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 232/354 (65%), Gaps = 12/354 (3%)
Query: 78 RADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVV 137
RA V VFG ++R +Q EI+ V G D LV+M GGGKSLCYQ+PA+LR+G +V+
Sbjct: 16 RALHVLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLRQGTGVVI 75
Query: 138 SPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKS 197
SPL++L+QDQV L +G+ A L ST S ++ I + L +G+L +LYV PE++ +
Sbjct: 76 SPLIALMQDQVDALDEVGVRAAFLNSTQSFDEAMQIERRLR--QGDLDLLYVAPERL-MT 132
Query: 198 KRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATA 257
R + LE + R+SL +IDEAHC SQWGHDFRP+Y L +L +FP VP +ALTATA
Sbjct: 133 PRCLDLLE----SARISLFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPQVPRIALTATA 188
Query: 258 TQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSES 317
Q+ + +++ L + +FVS+ +RPN+ Y + EK++ K ++D +I+ +P ++
Sbjct: 189 DQQTREEIIHRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLD----FIKSEHPE-DA 243
Query: 318 GIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGM 377
GIVYC SRK+ E+ A LR GI+A YHA MD R R+ + V+V T+AFGM
Sbjct: 244 GIVYCLSRKKVEETADFLRSEGINALAYHAGMDYAQRTANQARFLREDKIVMVATIAFGM 303
Query: 378 GINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
GI+KPDVRFV H L KSVE YYQE+GRAGRDGLP++ + + DV +Q M+
Sbjct: 304 GIDKPDVRFVCHLDLPKSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMI 357
>gi|296105298|ref|YP_003615444.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059757|gb|ADF64495.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 630
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/384 (42%), Positives = 245/384 (63%), Gaps = 18/384 (4%)
Query: 41 LKSLLEAFEASRGSPIQYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEII 100
+K L +A + + S + YG + + A +S A V FG +R Q+ II
Sbjct: 1 MKFLSQALKIAPVSFLAYGVNVAQA-----EVLNQESLAKQVLHETFGYQQFRPGQETII 55
Query: 101 NAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHM 160
VL GRD LV+M GGGKSLCYQ+PA++ G+ +VVSPL+SL++DQV L A G+ A
Sbjct: 56 ETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKDQVDQLLANGVAAAC 115
Query: 161 LTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDE 220
L ST ++E ++ + G+ +++LY+ PE++ F+ L + L+++DE
Sbjct: 116 LNSTQTREQQQEVMAGCRTGQ--VRLLYIAPERLMLDN-FLDHLAHWNPV----LLAVDE 168
Query: 221 AHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVST 280
AHC SQWGHDFRP+Y LG L+ +FP++P MALTATA + D++ +L + + VS+
Sbjct: 169 AHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRLDIVRLLGLNDPLIQVSS 228
Query: 281 INRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGI 340
+RPN+ YM+ EK +D++ +Y+QE +SGI+YC SR + E A L+ RG
Sbjct: 229 FDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RGKSGIIYCNSRAKVEDTAARLQNRGF 282
Query: 341 SADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYY 400
SA YHA ++ + R V ++ ++ LQ++V TVAFGMGINKP+VRFV+H + +++E+YY
Sbjct: 283 SAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 342
Query: 401 QESGRAGRDGLPSECLLFFRPADV 424
QE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 343 QETGRAGRDGLPAEAMLFYDPADM 366
>gi|330444885|ref|ZP_08308540.1| ATP-dependent DNA helicase RecQ [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489195|dbj|GAA03037.1| ATP-dependent DNA helicase RecQ [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 616
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 239/340 (70%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQ++I+AV D LVIM GGGKSLCYQ+PA+L+EG+ LV+SPL+SL+
Sbjct: 24 DVFGYQQFRVGQQDVIDAVNRDEDCLVIMPTGGGKSLCYQIPALLKEGVTLVISPLISLM 83
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST S++D +++A++ G +K++YV+PE++ + F+ +L
Sbjct: 84 KDQVDQLKANGVAAAYINSTMSRDDILAVFEAMQAGS--VKLVYVSPERVL-THDFIDRL 140
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
L+++++DEAHC SQWGHDFRP+Y LG+LK F ++P+MALTATA + ++D
Sbjct: 141 RDV----PLAMVAVDEAHCISQWGHDFRPEYAALGLLKQSFDNLPVMALTATADETTRHD 196
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+++ L + + +++ + +RPN+ Y + EK + +I +YI+ + GI+YC S
Sbjct: 197 IIQRLGLSQPHEYLGSFDRPNIRYTLWEKHKP----LTQIIRYIEGM--RGQCGIIYCNS 250
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ EQ++++LR GI A+ YHA ++ R V + ++ + V+V TVAFGMGINKP+V
Sbjct: 251 RKKVEQISEKLRDNGIRAEAYHAGLEHAERVHVQDAFQRDDIHVVVATVAFGMGINKPNV 310
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGLP+E ++F+ PAD+
Sbjct: 311 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAVMFYDPADL 350
>gi|315635218|ref|ZP_07890495.1| ATP-dependent helicase RecQ [Aggregatibacter segnis ATCC 33393]
gi|315475964|gb|EFU66719.1| ATP-dependent helicase RecQ [Aggregatibacter segnis ATCC 33393]
Length = 629
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 236/348 (67%), Gaps = 15/348 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+ A +V +VFG A+R Q+EII A L+G+D LVIMA G GKSLCYQ+PA+ +G+ LV
Sbjct: 29 ATAKNVLHSVFGYQAFRKGQEEIIQAALNGQDCLVIMATGTGKSLCYQIPALCFDGMTLV 88
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTST-TSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VSPL+SL++DQV L A G+ A L S+ T +E ++ +A+ G+LK+LY++PEK+
Sbjct: 89 VSPLISLMKDQVDQLRASGVEADYLNSSQTFEEQQQVQNRAIS---GQLKLLYLSPEKV- 144
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F + C ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+VP+MALTA
Sbjct: 145 MTNSFFQFISLC----QVSFIAIDEAHCISQWGHDFRPEYTQLGGLKGSFPNVPIMALTA 200
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA Q D+++ L + + V + +RPN+ Y + EK ++++ +++
Sbjct: 201 TADPTTQQDILQNLRLNRPHFHVGSFDRPNIRYTLVEKFKP----MEQLCRFVVAQ--KG 254
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGIVYC SR + E++A+ L +G+ A YHA M+ + REKV + ++ +QV+V T+AF
Sbjct: 255 KSGIVYCNSRNKVERIAETLCNKGVRAAAYHAGMENSLREKVQRDFQRDNIQVVVATIAF 314
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPAD 423
GMGINK +VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD
Sbjct: 315 GMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDPAD 362
>gi|401676992|ref|ZP_10808972.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. SST3]
gi|400215746|gb|EJO46652.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. SST3]
Length = 609
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLHETFGYQQFRPGQETIIETVLQGRDCLVVMPTGGGKSLCYQVPALVLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP++P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|448111284|ref|XP_004201806.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359464795|emb|CCE88500.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1430
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/350 (43%), Positives = 225/350 (64%), Gaps = 10/350 (2%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLL 141
+F + ++R NQ E I + L+GRDV V+M GGGKSLCYQLPA++ G +V+SPL+
Sbjct: 744 LFHLKSFRPNQLEAIVSTLNGRDVFVLMPTGGGKSLCYQLPALISSGKTRGTTIVISPLI 803
Query: 142 SLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFM 201
SL+QDQV L I A M++S S + K + GE L+++Y++PE ++ S+
Sbjct: 804 SLMQDQVQHLLHKNIRAGMISSKGSAAERKSTLEQFRNGE--LQLVYLSPEMVNTSQHIQ 861
Query: 202 SKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKV 261
+ + + + +L+ + +DEAHC S WGHDFRPDYK + + K QFP VP+MALTATA +KV
Sbjct: 862 RIIARLYESRQLARVVVDEAHCVSSWGHDFRPDYKGMSLFKQQFPQVPVMALTATANEKV 921
Query: 262 QNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVY 321
+ D++ L + + + NR NLFY ++ K++ +D I YI N ++GI+Y
Sbjct: 922 RMDIVHHLQMSDPVLLKQSFNRTNLFYEIKWKAAN---FLDWIRDYILTKQQN-KTGIIY 977
Query: 322 CFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINK 381
C S++ CE + L Q G+ YYHA + R ++ W +N++QVI T+AFGMGI+K
Sbjct: 978 CHSKQSCEVTSDRLNQWGVRCSYYHAGLSPTERFQIQTDWQQNRIQVICATIAFGMGIDK 1037
Query: 382 PDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
PDVRFVIH + +S+E YYQE+GRAGRDGLPSEC++F+ D +M+
Sbjct: 1038 PDVRFVIHLFIPRSLEGYYQETGRAGRDGLPSECIMFYSYKDARSLQNMI 1087
>gi|423316589|ref|ZP_17294494.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
gi|405583639|gb|EKB57579.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
Length = 733
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/386 (43%), Positives = 248/386 (64%), Gaps = 34/386 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++ Q+E+I+++L G+DV V+M GGGKSLCYQLPA+L EG A+VVSPL++L+++
Sbjct: 16 FGFSTFKGRQEEVISSLLEGKDVFVLMPTGGGKSLCYQLPALLLEGTAIVVSPLIALMKN 75
Query: 147 QVMCLAAL----GIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKR--F 200
QV + L G+ AH+L S+ ++ + ++ +EKG+ K+LYV PE + K + F
Sbjct: 76 QVDAVNGLSNEDGV-AHVLNSSLNRTQTQQVFDDIEKGK--TKLLYVAPESLIKDEYSDF 132
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ + ++S ++IDEAHC S+WGHDFRP+Y+NL + + DVP++ALTATAT K
Sbjct: 133 LKSV-------KISFVAIDEAHCISEWGHDFRPEYRNLKNIIEKIADVPIIALTATATPK 185
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
VQ+D+ + L + + S+ NRPNL+Y VR K +V K EI K+I + +SGI+
Sbjct: 186 VQDDIQKTLGMSDAKVYKSSFNRPNLYYEVRPKINVDK----EIVKFINQR--KGKSGII 239
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC SRK+ E+ AQ L+ GI+A YHA +D R ++ + VIV T+AFGMGI+
Sbjct: 240 YCLSRKKVEEFAQLLQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGID 299
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFY-----EN 435
KPDVRFVIH+ KS+E+YYQE+GRAGRDG CL F+ P D+ + + +
Sbjct: 300 KPDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPLSEKE 359
Query: 436 SGLQNLYDIVRYS-------QYPLHW 454
GLQ L++++ Y+ QY L++
Sbjct: 360 IGLQLLHEVIGYAETSMSRRQYILYY 385
>gi|56461647|ref|YP_156928.1| superfamily II DNA helicase [Idiomarina loihiensis L2TR]
gi|56180657|gb|AAV83379.1| Superfamily II DNA helicase, RecQ [Idiomarina loihiensis L2TR]
Length = 614
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 229/340 (67%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R Q++I+ A + GRD LV+M GGGKSLCYQLPA+ +G+ LV+SPLLSL+
Sbjct: 20 STFGYHQFRDGQEDIMQAAMQGRDSLVLMPTGGGKSLCYQLPAICGDGLTLVISPLLSLM 79
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV L AL I A L S S ++ + L+ G+ +K+LYV+PE++ + F+ +L
Sbjct: 80 QDQVEALKALDISAATLHSGVSSQESMATMQGLQSGD--IKLLYVSPERVLQPT-FIERL 136
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ +L+ I++DEAHC SQWGHDFRP+Y LG+L+ P+VP MALTATA Q+D
Sbjct: 137 QTL----KLNFIAVDEAHCISQWGHDFRPEYGKLGVLRNYLPNVPFMALTATADSATQHD 192
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L +R+ + S+ +RPN+ Y+V+EK K V D + K +GI+YC S
Sbjct: 193 IIERLCLREPLVHRSSFDRPNIRYVVQEKYKPLKQVRDYVKKQ------KGAAGIIYCGS 246
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E++++ L+Q G+ A YHA ++ +E ++ ++ + V+V TVAFGMGINKP++
Sbjct: 247 RKKTEELSESLQQAGVRAAPYHAGIEHQIKESTLRQFLRDDIDVVVATVAFGMGINKPNI 306
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFVIH + +SVE+YYQE+GRAGRDGLP+E ++ + P D
Sbjct: 307 RFVIHFDIPRSVESYYQETGRAGRDGLPAEAVMLYDPRDA 346
>gi|359454206|ref|ZP_09243496.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|414070221|ref|ZP_11406208.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
gi|358048729|dbj|GAA79745.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|410807319|gb|EKS13298.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
Length = 607
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 238/341 (69%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q+ +I+A ++G D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 22 VFGYSEFRDGQKAVIDAAINGHDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G +K+LYV PEK+ + + F+ +L
Sbjct: 82 DQVTQLQALGVKAAYVNNSLAREEQQLVYQQLH--QGLIKLLYVAPEKVLQ-RDFLERLS 138
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 139 HLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRFDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E ++SGI+YC SR
Sbjct: 195 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KNQSGIIYCTSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A++L G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 249 KRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E+YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 309 FVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGR 349
>gi|354548256|emb|CCE44993.1| hypothetical protein CPAR2_407960 [Candida parapsilosis]
Length = 1080
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 218/338 (64%), Gaps = 10/338 (2%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLL 141
VF + ++R NQ E + A L +DV V+M GGGKSLCYQLPA+++ +G +V+SPL+
Sbjct: 559 VFKLQSFRPNQLEAVVASLLNKDVFVLMPTGGGKSLCYQLPALIKGGHSKGTTVVISPLI 618
Query: 142 SLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFM 201
SL+QDQV L I A M++S + +D K EG L ++Y++PEK +KS
Sbjct: 619 SLMQDQVQHLIHKNIKAGMISSKANSDDNKHTLNLFR--EGFLDIVYLSPEKANKSTMIQ 676
Query: 202 SKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKV 261
+ + + +L+ + IDEAHC S WGHDFRPDYK +G K +FP VP+MALTATA +KV
Sbjct: 677 KIIGRLYERNQLARVVIDEAHCLSSWGHDFRPDYKGMGFFKERFPAVPIMALTATANEKV 736
Query: 262 QNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVY 321
+ D++ L + + + NR NL+Y +R KS ++ + YI Y N + GI+Y
Sbjct: 737 RMDIVHHLKMDSPVYLKQSFNRTNLYYEIRWKSGN---YLESMKDYILSRYKN-KCGIIY 792
Query: 322 CFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINK 381
C S++ CEQ + +L G+ +YHA M R K+ W KNK+Q+I T+AFGMGI+K
Sbjct: 793 CHSKQSCEQTSAKLNSFGLKTSFYHAGMSPEDRFKIQTNWQKNKIQLICATIAFGMGIDK 852
Query: 382 PDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
PDVRFVIH + +S+E YYQE+GRAGRDG PSEC++++
Sbjct: 853 PDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMYY 890
>gi|428224630|ref|YP_007108727.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
gi|427984531|gb|AFY65675.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
Length = 741
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/345 (46%), Positives = 230/345 (66%), Gaps = 9/345 (2%)
Query: 80 DDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSP 139
+D + FG ++R Q+EI+ A L RDV+VIM GGGKSLC+QLPA+L G+++VVSP
Sbjct: 16 EDALKHFFGYESFRPGQREIVEAALDRRDVMVIMPTGGGKSLCFQLPALLNSGVSVVVSP 75
Query: 140 LLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKR 199
L++L+QDQV L G+ A L S+ S E+ + + E +G +K+LYV PE++ +++
Sbjct: 76 LIALMQDQVASLQKNGVGATFLNSSISGEEVR--SRQNEILDGRIKLLYVAPERL-LNEQ 132
Query: 200 FMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQ 259
F+ L LS IDEAHC S+WGHDFRP+Y+ L ++ +FP+VP+MALTATAT
Sbjct: 133 FLLWLNDVRQQVGLSTFVIDEAHCVSEWGHDFRPEYRQLLQIRQRFPEVPVMALTATATD 192
Query: 260 KVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGI 319
+V+ D+ E L +R+ +++ NRPNL+Y VR K GK DE+ + I+ S I
Sbjct: 193 RVRQDMGEQLALRQPYVHIASFNRPNLYYEVRPK---GKNSYDELLQKIRHV---EGSCI 246
Query: 320 VYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGI 379
VYC SR+ ++ L+Q GI A YHA + + R + R+ ++ ++VIV T+AFGMGI
Sbjct: 247 VYCLSRRRVNELTTRLQQEGIEALPYHAGLSDDVRTENQTRFIRDDVRVIVATIAFGMGI 306
Query: 380 NKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
NKPDVR V+H+ L +++E YYQESGRAGRDG ++CLLF+ P D+
Sbjct: 307 NKPDVRLVMHYDLPRNIEAYYQESGRAGRDGETAQCLLFYGPGDI 351
>gi|324502420|gb|ADY41066.1| Bloom syndrome protein [Ascaris suum]
Length = 1090
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/378 (46%), Positives = 224/378 (59%), Gaps = 13/378 (3%)
Query: 81 DVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPL 140
DV FG +R Q+ I A L G D V+M G GKSLCYQLP+VL G+ +V+SPL
Sbjct: 307 DVLKKKFGFNQFRHRQKTAIIAALLGYDCFVLMPTGAGKSLCYQLPSVLSGGVTVVISPL 366
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
SLI+DQ + L I LTS S+ + IY AL + ++ +LYVTPEKI+ S++
Sbjct: 367 KSLIEDQKTKMKQLEINCCALTSDLSQAESDRIYAALSETNPKINLLYVTPEKIAASEKL 426
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF--PDVPMMALTATAT 258
+ H G L+ IDEAHC SQWGHDFRPDY L L+ + P VP+MALTATAT
Sbjct: 427 NNVFASLHRRGLLTRFVIDEAHCISQWGHDFRPDYTKLHSLRKVYINPRVPIMALTATAT 486
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
K+ D + L + F+S+ R NL Y V K + E K + YP +SG
Sbjct: 487 PKIATDARDHLSMPNSKLFISSFVRSNLKYDVIAKRPKSLSAVMERMKAL---YPG-KSG 542
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
IVYC SRKECE V++ L+ +GISAD YHA + R+ V +W N + VI T+AFGMG
Sbjct: 543 IVYCLSRKECETVSKSLQNQGISADVYHAGLPDKQRQNVQAKWINNHINVICATIAFGMG 602
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG- 437
I+KPDVRFVIH S+ KS+E YYQE+GRAGRDGL S C L + D R M+ +NS
Sbjct: 603 IDKPDVRFVIHFSMPKSIEGYYQETGRAGRDGLTSYCALLYCYNDSIRARKMIEGDNSTV 662
Query: 438 ------LQNLYDIVRYSQ 449
L NL +V Y +
Sbjct: 663 GVRSMHLNNLMQVVAYCE 680
>gi|336248080|ref|YP_004591790.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes KCTC 2190]
gi|444353809|ref|YP_007389953.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes EA1509E]
gi|334734136|gb|AEG96511.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes KCTC 2190]
gi|443904639|emb|CCG32413.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes EA1509E]
Length = 608
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II L GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQESIIATALEGRDCLVVMPTGGGKSLCYQVPALVLGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLSHWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPHIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENDIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|146313606|ref|YP_001178680.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. 638]
gi|145320482|gb|ABP62629.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. 638]
Length = 609
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A + ST ++E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACINSTQTREQQQDVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP +P MALTA
Sbjct: 128 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPFSQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQTRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|392981231|ref|YP_006479819.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392327164|gb|AFM62117.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 609
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP++P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRLDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|419958981|ref|ZP_14475038.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae GS1]
gi|388605950|gb|EIM35163.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae GS1]
Length = 609
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQ--VRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP++P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRQDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|315127615|ref|YP_004069618.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
gi|315016129|gb|ADT69467.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
Length = 607
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 237/341 (69%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q +I+A ++G+D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 22 VFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G +K+LYV PEK+ + + F+ +L
Sbjct: 82 DQVTQLQALGVKAAYVNNSLAREEQQLVYQQLH--QGLIKLLYVAPEKVLQ-RDFLERLS 138
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 139 HLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRFDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E ++SGI+YC SR
Sbjct: 195 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KNQSGIIYCTSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A++L G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 249 KRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 309 FVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGR 349
>gi|406674061|ref|ZP_11081273.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
gi|405584835|gb|EKB58711.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
Length = 733
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/386 (43%), Positives = 248/386 (64%), Gaps = 34/386 (8%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++ Q+E+I+++L G+DV V+M GGGKSLCYQLPA+L EG A+VVSPL++L+++
Sbjct: 16 FGFSTFKGRQEEVISSLLEGKDVFVLMPTGGGKSLCYQLPALLLEGTAIVVSPLIALMKN 75
Query: 147 QVMCLAAL----GIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKR--F 200
QV + L G+ AH+L S+ ++ + ++ +EKG+ K+LYV PE + K + F
Sbjct: 76 QVDAVNGLSNEDGV-AHVLNSSLNRTQTQQVFDDIEKGK--TKLLYVAPESLIKDEYSDF 132
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ + ++S ++IDEAHC S+WGHDFRP+Y+NL + + DVP++ALTATAT K
Sbjct: 133 LKSV-------KISFVAIDEAHCISEWGHDFRPEYRNLKNIIEKIADVPIIALTATATPK 185
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
VQ+D+ + L + + S+ NRPNL+Y VR K +V K EI K+I + +SGI+
Sbjct: 186 VQDDIQKTLGMSDAEVYKSSFNRPNLYYEVRPKINVDK----EIVKFINQR--KGKSGII 239
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC SRK+ E+ AQ L+ GI+A YHA +D R ++ + VIV T+AFGMGI+
Sbjct: 240 YCLSRKKVEEFAQLLQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGID 299
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFY-----EN 435
KPDVRFVIH+ KS+E+YYQE+GRAGRDG CL F+ P D+ + + +
Sbjct: 300 KPDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPLSEKE 359
Query: 436 SGLQNLYDIVRYS-------QYPLHW 454
GLQ L++++ Y+ QY L++
Sbjct: 360 IGLQLLHEVIGYAETSMSRRQYILYY 385
>gi|253690325|ref|YP_003019515.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756903|gb|ACT14979.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 608
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 232/340 (68%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+ FG +R QQEII+A LSG+D LVIM GGGKSLCYQ+PA++ +G+ LVVSPL+SL+
Sbjct: 19 DTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLM 78
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A L ST ++E + + G+ +K+LY+ PE+++ + F+ L
Sbjct: 79 KDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTGQ--IKLLYIAPERLT-TDSFLDHL 135
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+++LI++DEAHC SQWGHDFRP+Y+ LG +K +FP +P +ALTATA + +ND
Sbjct: 136 AHW----QIALIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRND 191
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ +L ++ + +++ +RPN+ Y + EK +D++ ++Q +SGI+YC S
Sbjct: 192 IVRLLDLQSPLIQINSFDRPNIRYTLVEKFKP----LDQLWMFVQGQ--RGKSGIIYCNS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R E + L+ RG+SA YHA +D R +V + ++ LQV+V TVAFGMGINKP+V
Sbjct: 246 RSRVEDICARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGL +E LF+ PAD+
Sbjct: 306 RFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADM 345
>gi|365972647|ref|YP_004954208.1| ATP-dependent DNA helicase recQ [Enterobacter cloacae EcWSU1]
gi|365751560|gb|AEW75787.1| ATP-dependent DNA helicase recQ [Enterobacter cloacae EcWSU1]
Length = 630
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 31 ESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTV 90
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L S+ ++E ++ + G+ +++LY+ PE++
Sbjct: 91 VVSPLISLMKDQVDQLLANGVAAACLNSSQTREQQQEVMAGCRTGQ--VRLLYIAPERLM 148
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP++P MALTA
Sbjct: 149 LDN-FLDHLSHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTA 203
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 204 TADDTTRQDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 257
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA ++ R V ++ ++ LQ++V TVAF
Sbjct: 258 KSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAF 317
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 318 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 366
>gi|330841793|ref|XP_003292875.1| hypothetical protein DICPUDRAFT_157642 [Dictyostelium purpureum]
gi|325076832|gb|EGC30587.1| hypothetical protein DICPUDRAFT_157642 [Dictyostelium purpureum]
Length = 884
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/380 (40%), Positives = 239/380 (62%), Gaps = 5/380 (1%)
Query: 55 PIQYGGSSSTAVEN-WSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIM 113
PI+ SS A++ EWDS D VFG ++R QQ++IN++L GRD V +
Sbjct: 377 PIKMQSPSSNAIDGVLEKEHEWDSLVDSCNRMVFGNSSFRPLQQQVINSILHGRDTFVSL 436
Query: 114 AAGGGKSLCYQLPAVL-REGIALVVSPLLSLIQDQVMCLAALGIPAHMLTST-TSKEDEK 171
GGGKSLC+Q+P+++ GI++V+SPLLSL+QDQV L LG+PA + S+ T ++ K
Sbjct: 437 PTGGGKSLCFQIPSLVDSSGISIVLSPLLSLMQDQVHKLKLLGVPACSINSSNTPLQNRK 496
Query: 172 FIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDF 231
I + L+K + ++YV+PE++S+++ F+ L ++ GR+ + +DEAHC S+WGHDF
Sbjct: 497 TIEQLLDKDNCNISIVYVSPERLSQTE-FLEVLNTLNNQGRIKRLIVDEAHCISEWGHDF 555
Query: 232 RPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVR 291
RP Y+ + + + FP+VP+ A TATA V++D+ L + + S+ R NL Y +R
Sbjct: 556 RPAYRKISLFRENFPNVPIAAFTATAKPSVESDIKNELKLHNPVTIASSFLRTNLLYQIR 615
Query: 292 EKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDI 351
KS +IA YI+ S GI+YC + +CE ++Q L + I + +YH +
Sbjct: 616 SKSPDQSRSFADIADYIKMRQSRS-CGIIYCATTNDCELLSQYLNEENIDSHFYHGSLKN 674
Query: 352 NAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGL 411
+ R ++ W+ ++IV T+AFGMGI+ DVRF+IH+++ S+E YYQ++GRAGRDGL
Sbjct: 675 SERVEIQKAWTNKSFKIIVTTLAFGMGIDVKDVRFIIHYTMPSSIEAYYQQTGRAGRDGL 734
Query: 412 PSECLLFFRPADVPRQSSMV 431
PSEC+L++ D + S ++
Sbjct: 735 PSECILYYTSNDYFKISRII 754
>gi|343510097|ref|ZP_08747353.1| ATP-dependent DNA helicase RecQ [Vibrio scophthalmi LMG 19158]
gi|342803236|gb|EGU38611.1| ATP-dependent DNA helicase RecQ [Vibrio scophthalmi LMG 19158]
Length = 612
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 236/361 (65%), Gaps = 13/361 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V VFG +R+ Q+++I A + G+D LVIM GGGKSLCYQ+PA++REG+ LV+S
Sbjct: 17 AQSVLEQVFGYQQFRSGQEQVIEAAIQGKDSLVIMPTGGGKSLCYQVPALVREGLTLVIS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A + S+ +E+ +Y + G LK++YV+PE++ +
Sbjct: 77 PLISLMKDQVDQLKADGVAAECINSSMPREELISVYNRMNSGA--LKLVYVSPERVLM-R 133
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L+ LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP MALTATA
Sbjct: 134 DFIERLQGV----SLSMIAVDEAHCISQWGHDFRPEYASLGQLKHYFPHVPFMALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ND++ L + + + ++ + +RPN+ Y + EK + +I +Y++ G
Sbjct: 190 DATRNDIVSRLQLVEPLNYLGSFDRPNIRYTLLEKHKP----VSQIIRYLETQ--KGHCG 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SRK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMG
Sbjct: 244 IIYCGSRKKVEMVTEKLCNNHIRAASYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGL 438
INKP+VRFV H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G
Sbjct: 304 INKPNVRFVAHFDIPRNIESYYQETGRAGRDGLPAEAVMLYDPADISWLRRMLDEKDEGP 363
Query: 439 Q 439
Q
Sbjct: 364 Q 364
>gi|407452782|ref|YP_006724507.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
gi|403313766|gb|AFR36607.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
Length = 734
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/384 (44%), Positives = 244/384 (63%), Gaps = 30/384 (7%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++ Q+ II+ +L G+DV V+M GGGKSLCYQLPA++ EG A+VVSPL++L+++
Sbjct: 16 FGFSTFKGQQEAIISTLLGGKDVFVLMPTGGGKSLCYQLPALISEGTAIVVSPLIALMKN 75
Query: 147 QVMCLAAL----GIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV + L G+ AH+L S+ +K K ++ + G K+LYV PE + K + ++
Sbjct: 76 QVDAVNGLSSEEGV-AHVLNSSLNKTQIKQVFSDI--NSGRTKLLYVAPESLIK-EDYLD 131
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L++ + +S ++IDEAHC S+WGHDFRP+Y+NL + + +VP++ALTATAT KVQ
Sbjct: 132 FLKQAN----ISFVAIDEAHCISEWGHDFRPEYRNLKGIIDKIANVPVIALTATATPKVQ 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
+D+ + L + + F + NRPNLFY VR K V K EI K+I ++ +SGIVYC
Sbjct: 188 DDIQKTLGMSDAVVFKESFNRPNLFYEVRPKVDVEK----EIVKFINKN--KGKSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK+ E+ AQ L+ GI+A YHA +D R ++ + VIV T+AFGMGI+KP
Sbjct: 242 LSRKKVEEFAQTLQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSM-----VFYENSG 437
DVRFVIH+ KS+E+YYQE+GRAGRDG CL F+ P D+ + V + G
Sbjct: 302 DVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKSVSEKEVG 361
Query: 438 LQNLYDIVRYS-------QYPLHW 454
LQ L ++V Y+ QY L++
Sbjct: 362 LQLLNEVVGYAETSMSRRQYILYY 385
>gi|358342600|dbj|GAA27215.2| ATP-dependent DNA helicase Q1, partial [Clonorchis sinensis]
Length = 537
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/355 (48%), Positives = 227/355 (63%), Gaps = 20/355 (5%)
Query: 117 GGKSLCYQLPAVL-----REG-----IALVVSPLLSLIQDQVMCLAALGIPAHMLT---S 163
GKSL YQLPA+L R G + LV+SPL+SL+ DQ M L GIP M+ +
Sbjct: 1 AGKSLVYQLPALLDHSRFRSGQNTNPVTLVISPLVSLMTDQTMNLTRSGIPEGMVKVFDA 60
Query: 164 TTSKEDEKFIYKAL----EKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISID 219
T ++K I +L K L++LYVTPEK++KSKR +++LE + G L I+ID
Sbjct: 61 NTPLTEQKEILDSLVGKSTKKSISLRLLYVTPEKLAKSKRLLNRLEAAYSKGLLGRIAID 120
Query: 220 EAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIR--KCIKF 277
E HC SQWGHDFRPDY+ L +L+ QFP VP++ +TATA+ V D+ ML ++ KC+
Sbjct: 121 EVHCLSQWGHDFRPDYQFLHVLRRQFPTVPILGITATASGNVIVDVQSMLGLQPDKCLVV 180
Query: 278 VSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQ 337
S NR NL+Y VR K + ++ IQ Y +SGI+YCFS+K+ E VA ELR+
Sbjct: 181 RSCYNRKNLYYEVRTTCGPPKSAVQQLYLLIQNRY-CGQSGIIYCFSQKDTEDVAGELRR 239
Query: 338 RGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVE 397
G+ +YHA+MD NAR +VH W K+ +IV TVAFGMGI+KPDVRFV+H S SKS+E
Sbjct: 240 MGLRVAHYHANMDGNARARVHTDWFTGKILIIVATVAFGMGIDKPDVRFVLHFSASKSLE 299
Query: 398 TYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQYPL 452
YYQESGRAGRD +EC++ +R +D R +SMV E +GL L IV Y P+
Sbjct: 300 NYYQESGRAGRDSEAAECVVLWRFSDFFRLASMVSSERTGLSKLLQIVAYCLDPV 354
>gi|334126137|ref|ZP_08500116.1| ATP-dependent helicase RecQ [Enterobacter hormaechei ATCC 49162]
gi|333385797|gb|EGK57023.1| ATP-dependent helicase RecQ [Enterobacter hormaechei ATCC 49162]
Length = 630
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/384 (42%), Positives = 244/384 (63%), Gaps = 18/384 (4%)
Query: 41 LKSLLEAFEASRGSPIQYGGSSSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEII 100
+K L +A + + S + YG + + A +S A V FG +R Q+ II
Sbjct: 1 MKFLSQALKIAPVSFLAYGVNVAQA-----EVLNQESLAKQVLHETFGYQQFRPGQETII 55
Query: 101 NAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHM 160
VL GRD LV+M GGGKSLCYQ+PA++ G+ +VVSPL+SL++DQV L A G+ A
Sbjct: 56 ETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKDQVDQLLANGVAAAC 115
Query: 161 LTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDE 220
L ST ++E ++ + G+ +++LY+ PE++ F+ L + L+++DE
Sbjct: 116 LNSTQTREQQQEVMAGCRTGQ--IRLLYIAPERLMLDN-FLDHLAHWNPV----LLAVDE 168
Query: 221 AHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVST 280
AHC SQWGHDFRP+Y LG L+ +FP++P MALTATA + D++ +L + VS+
Sbjct: 169 AHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRLDIVRLLGLNDPYIQVSS 228
Query: 281 INRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGI 340
+RPN+ YM+ EK +D++ +Y+QE +SGI+YC SR + E A L+ RG
Sbjct: 229 FDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RGKSGIIYCNSRAKVEDTAARLQNRGF 282
Query: 341 SADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYY 400
SA YHA ++ + R V ++ ++ LQ++V TVAFGMGINKP+VRFV+H + +++E+YY
Sbjct: 283 SAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 342
Query: 401 QESGRAGRDGLPSECLLFFRPADV 424
QE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 343 QETGRAGRDGLPAEAMLFYDPADM 366
>gi|313205605|ref|YP_004044782.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383484930|ref|YP_005393842.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|312444921|gb|ADQ81276.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459615|gb|AFD55299.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
Length = 734
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/384 (44%), Positives = 244/384 (63%), Gaps = 30/384 (7%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++ Q+ II+ +L G+DV V+M GGGKSLCYQLPA++ EG A+VVSPL++L+++
Sbjct: 16 FGFSTFKGQQEAIISTLLGGKDVFVLMPTGGGKSLCYQLPALISEGTAIVVSPLIALMKN 75
Query: 147 QVMCLAAL----GIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV + L G+ AH+L S+ +K K ++ + G K+LYV PE + K + ++
Sbjct: 76 QVDAVNGLSSEEGV-AHVLNSSLNKTQIKQVFNDI--NSGRTKLLYVAPESLIK-EDYLD 131
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L++ + +S ++IDEAHC S+WGHDFRP+Y+NL + + +VP++ALTATAT KVQ
Sbjct: 132 FLKQAN----ISFVAIDEAHCISEWGHDFRPEYRNLKGIIDKIANVPVIALTATATPKVQ 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
+D+ + L + + F + NRPNLFY VR K V K EI K+I ++ +SGIVYC
Sbjct: 188 DDIQKTLGMSDAVVFKESFNRPNLFYEVRPKVDVEK----EIVKFINKN--KGKSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK+ E+ AQ L+ GI+A YHA +D R ++ + VIV T+AFGMGI+KP
Sbjct: 242 LSRKKVEEFAQTLQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSM-----VFYENSG 437
DVRFVIH+ KS+E+YYQE+GRAGRDG CL F+ P D+ + V + G
Sbjct: 302 DVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKSVSEKEVG 361
Query: 438 LQNLYDIVRYS-------QYPLHW 454
LQ L ++V Y+ QY L++
Sbjct: 362 LQLLNEVVGYAETSMSRRQYILYY 385
>gi|350529733|ref|ZP_08908674.1| ATP-dependent DNA helicase RecQ [Vibrio rotiferianus DAT722]
Length = 611
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 232/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQ +I+A + GRD LVI+ GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 22 DVFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECINSTMPREELLSVYNRMHTGH--LKLVYVSPERVLM-RDFIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK QF VP MALTATA + D
Sbjct: 139 ENL----PLSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + +I +Y++ N GI+YC S
Sbjct: 195 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKP----VSQIVRYLETQKGNC--GIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 363
>gi|126661004|ref|ZP_01732090.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
gi|126617703|gb|EAZ88486.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
Length = 710
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/346 (46%), Positives = 235/346 (67%), Gaps = 11/346 (3%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R+ Q++IIN L+ +D+L+IM GGGKSLC+QLPA+L+ G+ +VVSPL++L+QD
Sbjct: 16 FGYDQFRSGQKQIINEALNDKDLLIIMPTGGGKSLCFQLPALLKSGVCVVVSPLIALMQD 75
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L GI A L ST ++E+ + A+ KG+ +K++YV PE++ + F++ L+
Sbjct: 76 QVDALLDNGIGATFLNSTLNREELQSRENAILKGK--IKLVYVAPERLL-NDNFLNFLDF 132
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
LS +IDEAHC S WGHDFRP+Y+ L L+ ++P VPM ALTATAT++V+ D++
Sbjct: 133 LKQKVGLSAFAIDEAHCVSAWGHDFRPEYRQLKQLRFRYPKVPMFALTATATKRVRADII 192
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE-SGIVYCFSR 325
E L ++ V++ +RPNL+Y V++KS + ++ YI+ N E SGI+YC SR
Sbjct: 193 EQLGLQNPTVHVASFDRPNLYYEVQQKS---RRSYTQLLNYIR----NQEGSGIIYCLSR 245
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K E +A L+Q GI A YHA M + R R+ ++ +++IV T+AFGMGINKPDVR
Sbjct: 246 KNVETIALRLQQDGIDALPYHAGMYDDERATNQTRFIRDDVRIIVATIAFGMGINKPDVR 305
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
FV+H+ L +++E+YYQESGRAGRDG P+ C LFF D+ R ++
Sbjct: 306 FVVHYDLPRNLESYYQESGRAGRDGEPANCALFFSFGDLKRLEYLI 351
>gi|262040869|ref|ZP_06014095.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041758|gb|EEW42803.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 608
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II L GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLQETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST S+E + + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQSREQLQEVMAGCRSGQ--VRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++++DEAHC SQWGHDFRP+Y LG L+ + P +P MALTA
Sbjct: 128 LDN-FLEHLANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + + VS+ +RPN+ YM+ EK +D++ +Y+Q+
Sbjct: 183 TADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKP----LDQLMRYVQDQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RGISA YHA ++ + R +V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRSKVEDTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|424038225|ref|ZP_17776853.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-02]
gi|408894628|gb|EKM31275.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-02]
Length = 611
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 232/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQ +I+A + GRD LVI+ GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 22 DVFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECINSTMPREELLSVYNRMHTGN--LKLVYVSPERVLM-RDFIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK QF VP MALTATA + D
Sbjct: 139 ENLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + +I +Y++ N GI+YC S
Sbjct: 195 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKP----VSQIVRYLETQKGNC--GIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 363
>gi|424044511|ref|ZP_17782123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-03]
gi|408887908|gb|EKM26398.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-03]
Length = 611
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 232/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQ +I+A + GRD LVI+ GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 22 DVFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECINSTMPREELLSVYNRMHTGH--LKLVYVSPERVLM-RDFIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK QF VP MALTATA + D
Sbjct: 139 ENL----PLSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + +I +Y++ N GI+YC S
Sbjct: 195 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKP----VSQIVRYLETQKGNC--GIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 363
>gi|153834682|ref|ZP_01987349.1| ATP-dependent DNA helicase RecQ [Vibrio harveyi HY01]
gi|148868878|gb|EDL67938.1| ATP-dependent DNA helicase RecQ [Vibrio harveyi HY01]
Length = 611
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 232/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQ +I+A + GRD LVI+ GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 22 DVFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECINSTMPREELLSVYNRMHTGH--LKLVYVSPERVLM-RDFIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK QF VP MALTATA + D
Sbjct: 139 ENL----PLSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + +I +Y++ N GI+YC S
Sbjct: 195 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKP----VSQIVRYLETQKGNC--GIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 363
>gi|288550569|ref|ZP_05970934.2| ATP-dependent DNA helicase RecQ [Enterobacter cancerogenus ATCC
35316]
gi|288314641|gb|EFC53579.1| ATP-dependent DNA helicase RecQ [Enterobacter cancerogenus ATCC
35316]
Length = 630
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 31 ESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTV 90
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E ++ + G+ +++LY+ PE++
Sbjct: 91 VVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQDVMAGCRNGQ--IRLLYIAPERLM 148
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP++P MALTA
Sbjct: 149 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTA 203
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 204 TADDTTRLDIVRLLGLNDPFIQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 257
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 258 KSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 317
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 318 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 366
>gi|329120630|ref|ZP_08249293.1| ATP-dependent helicase RecQ [Neisseria bacilliformis ATCC BAA-1200]
gi|327460854|gb|EGF07188.1| ATP-dependent helicase RecQ [Neisseria bacilliformis ATCC BAA-1200]
Length = 782
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 231/342 (67%), Gaps = 13/342 (3%)
Query: 78 RADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVV 137
RA ++ VFG PA+R +Q+EI+ + +G+ ++V+M GGGKSLCYQ+PA++ +G A+VV
Sbjct: 5 RAIEILNEVFGYPAFRGSQEEIVETLAAGQSLMVLMPTGGGKSLCYQIPALMLDGTAIVV 64
Query: 138 SPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKS 197
SPL++L+ DQV L A G+ + S TS E+ + I A + +G LK+LYV+PE++ +
Sbjct: 65 SPLIALMNDQVANLRAAGVHCAAVHSGTSAEEARQI--AEDIAQGRLKLLYVSPERLV-T 121
Query: 198 KRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATA 257
+RF+ L+ +SL +IDEAHC SQWGHDFRP+Y+ LG+L ++P VP +ALTATA
Sbjct: 122 ERFLRFLDHTP----VSLFAIDEAHCVSQWGHDFRPEYRQLGLLADRYPAVPRIALTATA 177
Query: 258 TQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSES 317
+ + D+ LH+ +FV+ +RPN++Y V EK+ K ++ +++++ N ES
Sbjct: 178 DAETRADIKHYLHLENAAEFVAGFDRPNIYYQVVEKNGGKK----QLLQFVKQQ--NGES 231
Query: 318 GIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGM 377
GIVYC SRK+ + A L + GI+A YHA M + RE R++ VIV TVAFGM
Sbjct: 232 GIVYCLSRKKVDDTAAFLNENGIAAAAYHAGMGMAEREAAQHRFTHEDGLVIVATVAFGM 291
Query: 378 GINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
GI+KPDVRFV H + +S+E +YQESGRAGRDGLP+E L +
Sbjct: 292 GIDKPDVRFVAHLDMPQSIEHFYQESGRAGRDGLPAESWLCY 333
>gi|119470517|ref|ZP_01613220.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
gi|119446218|gb|EAW27495.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
Length = 607
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 237/341 (69%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q+ +I+A L+ +D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 22 VFGYSEFRDGQKAVIDAALNAQDTLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G +K+LYV PEK+ + + F+ +L
Sbjct: 82 DQVAQLQALGVKAAYVNNSLAREEQQRVYQQLH--QGLIKLLYVAPEKVLQ-RDFLERLS 138
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
++SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 139 HL----KISLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRFDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E ++SGI+YC SR
Sbjct: 195 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KNQSGIIYCTSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A++L G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 249 KRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 309 FVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGR 349
>gi|359449260|ref|ZP_09238757.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
gi|392537893|ref|ZP_10285030.1| ATP-dependent DNA helicase [Pseudoalteromonas marina mano4]
gi|358044909|dbj|GAA75006.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
Length = 607
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 237/341 (69%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q+ +I+A L+ +D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 22 VFGYSEFRDGQKAVIDAALNAQDTLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+++ +Y+ L +G +K+LYV PEK+ + + F+ +L
Sbjct: 82 DQVAQLQALGVKAAYVNNSLAREEQQRVYQQLH--QGLIKLLYVAPEKVLQ-RDFLERLS 138
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
++SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 139 HL----KISLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRFDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E ++SGI+YC SR
Sbjct: 195 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KNQSGIIYCTSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A++L G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 249 KRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 309 FVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGR 349
>gi|84393647|ref|ZP_00992398.1| ATP-dependent DNA helicase RecQ [Vibrio splendidus 12B01]
gi|84375715|gb|EAP92611.1| ATP-dependent DNA helicase RecQ [Vibrio splendidus 12B01]
Length = 612
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 229/340 (67%), Gaps = 13/340 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R QQE+I+ + G+D LVIM GGGKSLCYQ+PA++REG+ LV+SPL+SL+
Sbjct: 23 DVFGYQSFRDGQQEVIDLAVEGKDSLVIMPTGGGKSLCYQIPALVREGLTLVISPLISLM 82
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + S+ +E+ ++ + G+ LKM+YV+PE++ + F+ +L
Sbjct: 83 KDQVDQLKANGVAAECINSSMPRENLISVFNRMNSGQ--LKMVYVSPERVLM-RDFIERL 139
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP MALTATA + D
Sbjct: 140 QGL----PLSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPYMALTATADDATRKD 195
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L + + + +RPN+ Y + EK + ++ +Y++ N GI+YC S
Sbjct: 196 IISRLQLVDPHTHLGSFDRPNIRYNLVEKHKP----VSQVVRYLETQKGNC--GIIYCGS 249
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L GI A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 250 RKKVEMVTEKLCNNGIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 309
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ F PAD+
Sbjct: 310 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADM 349
>gi|119773474|ref|YP_926214.1| ATP-dependent DNA helicase RecQ [Shewanella amazonensis SB2B]
gi|119765974|gb|ABL98544.1| ATP-dependent DNA helicase RecQ [Shewanella amazonensis SB2B]
Length = 607
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/346 (46%), Positives = 234/346 (67%), Gaps = 14/346 (4%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q+E++ V G D LVIM GGGKSLCYQ+PA++ G+ LVVSPL+SL++
Sbjct: 20 VFGYRDFRPGQREVMTRVCQGEDCLVIMPTGGGKSLCYQVPALVLPGVTLVVSPLISLMK 79
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L G+ A L S+ +E + + L GE LK+LYV+PE++ + F+S+L+
Sbjct: 80 DQVDSLIQSGVAAAYLNSSQPREQAIEVLRQLRFGE--LKLLYVSPERLLQGD-FLSRLD 136
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ H +SL ++DEAHC S+WGHDFRP+Y LG LK +FP VP+MALTATA + ++ +
Sbjct: 137 ELH----ISLFAVDEAHCISEWGHDFRPEYAALGQLKQRFPHVPVMALTATADEATRSSI 192
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
E L I+ + +++ +RPN+ Y V EK + +++ ++IQ +GIVYC SR
Sbjct: 193 CERLGIQP-FQHLASFDRPNIRYTVAEKLNAA----NQLRQFIQSQ--KGANGIVYCSSR 245
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
+ ++VA+ LRQ+G A+ YHA M + R V R+ K+++ V+V TVAFGMGINK +VR
Sbjct: 246 RRVDEVAERLRQQGFYAEGYHAGMTQDERASVQDRFLKDQIDVVVATVAFGMGINKSNVR 305
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
FV+H+ + KS+E+YYQE+GRAGRDGL +E LL F PAD+ R ++
Sbjct: 306 FVVHYDIPKSIESYYQETGRAGRDGLDAEALLLFDPADIGRVRHLI 351
>gi|156848959|ref|XP_001647360.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156118046|gb|EDO19502.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 1332
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 228/363 (62%), Gaps = 10/363 (2%)
Query: 73 FEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG 132
+ W + + ++F +P +R NQ++ +NA L G+DV V+M GGGKSLCYQLPA+++ G
Sbjct: 540 YRWTNEVNHKLKSIFKLPGFRPNQEDAVNATLDGKDVFVLMPTGGGKSLCYQLPAMIKSG 599
Query: 133 ----IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLY 188
+V+SPL+SL+ DQV L + I A M +S + E + + G L ++Y
Sbjct: 600 KTRGTTIVISPLISLMHDQVEHLKSKDIKADMFSSKGTTEQRRNTFNLFILGL--LDIIY 657
Query: 189 VTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDV 248
++PE +S S++ ++K + +L+ I +DEAHC S WGHDFRPDYK L K ++PD+
Sbjct: 658 ISPEMVSASEQCKKAIKKLYVDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 717
Query: 249 PMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYI 308
P+MALTATA ++V D+ L ++ + + NR NLFY +R K+ K I E+ I
Sbjct: 718 PLMALTATANERVILDINHNLSLKDPVFLKQSFNRTNLFYEIRIKN---KNSIFEMCNDI 774
Query: 309 QESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQV 368
+ + N ++GI+YC S+ CEQ A + + G+ YYHA M+ R KV W ++K+QV
Sbjct: 775 KTRFRN-QTGIIYCHSKNSCEQTASLIERSGVKCTYYHAGMEPEDRMKVQQAWQEDKIQV 833
Query: 369 IVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQS 428
I TVAFGMGI+KPDVRFV H ++ +++E YYQE+GRAGRDG S C+ +F D+
Sbjct: 834 ICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFKDIRSIQ 893
Query: 429 SMV 431
+M+
Sbjct: 894 TMI 896
>gi|91228026|ref|ZP_01262111.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus 12G01]
gi|91188255|gb|EAS74554.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus 12G01]
Length = 611
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 231/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
VFG +R QQ +I+A + GRD LVI+ GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 22 GVFGYQEFRDGQQLVIDAAIEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECINSTMPREELLSVYNRMHTGH--LKLVYVSPERVLM-RDFIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK QF VP MALTATA + D
Sbjct: 139 ENL----PLSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + +I +Y++ N GI+YC S
Sbjct: 195 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKP----VSQIVRYLETQKGNC--GIIYCCS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 363
>gi|354721299|ref|ZP_09035514.1| ATP-dependent DNA helicase RecQ [Enterobacter mori LMG 25706]
Length = 609
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQ--IRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP++P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRLDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|345301389|ref|YP_004830747.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
gi|345095326|gb|AEN66962.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
Length = 630
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/349 (44%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II+ VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 31 ESLAKQVLHETFGYQQFRPGQETIIDTVLGGRDCLVVMPTGGGKSLCYQVPALVLNGLTV 90
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E + + G+ +++LY+ PE++
Sbjct: 91 VVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQLEVMAGCRTGQ--IRLLYIAPERLM 148
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ LE H + L+++DEAHC SQWGHDFRP+Y LG L+ +FP++P MALTA
Sbjct: 149 LD----NFLEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTA 203
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 204 TADDTTRLDIVRLLGLNDPFIQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 257
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 258 KSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 317
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 318 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 366
>gi|262392866|ref|YP_003284720.1| ATP-dependent DNA helicase RecQ [Vibrio sp. Ex25]
gi|451976070|ref|ZP_21927241.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus E0666]
gi|262336460|gb|ACY50255.1| ATP-dependent DNA helicase RecQ [Vibrio sp. Ex25]
gi|451929977|gb|EMD77700.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus E0666]
Length = 611
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 230/354 (64%), Gaps = 13/354 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A + G+D LVIM GGGKSLCYQ+PA++R GI LV+SPL+SL++
Sbjct: 23 VFGYQTFRDGQQEVIEAAIEGKDSLVIMPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ +Y + G+ LK++YV+PE++ + F+ +LE
Sbjct: 83 DQVDQLKANGVAAECVNSTMNREELLSVYNRMHSGQ--LKLVYVSPERVLM-RDFIERLE 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
LS+I++DEAHC SQWGHDFRP+Y LG LK F VP MALTATA + D+
Sbjct: 140 NL----PLSMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVPFMALTATADDATRRDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L + + ++ + +RPN+ Y + EK + +I +Y+ GI+YC SR
Sbjct: 196 LERLRLHEPQVYLGSFDRPNIRYTLVEKHKP----VSQIIRYLATQ--KGSCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E V ++L I A YHA MD R V + ++ +Q++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMVTEKLCNNHIRAAGYHAGMDTEERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 363
>gi|386320424|ref|YP_006016586.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|416111385|ref|ZP_11592598.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|442315223|ref|YP_007356526.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
gi|315022665|gb|EFT35690.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|325334967|gb|ADZ11241.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|441484146|gb|AGC40832.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
Length = 734
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 244/384 (63%), Gaps = 30/384 (7%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++ Q+ II+ +L G+D+ V+M GGGKSLCYQLPA++ EG A+VVSPL++L+++
Sbjct: 16 FGFSTFKGQQEAIISTLLGGKDIFVLMPTGGGKSLCYQLPALISEGTAIVVSPLIALMKN 75
Query: 147 QVMCLAAL----GIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV + L G+ AH+L S+ +K K ++ + G K+LYV PE + K + ++
Sbjct: 76 QVDAVNGLSSEEGV-AHVLNSSLNKTQIKQVFSDI--NSGRTKLLYVAPESLIK-EDYLD 131
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L++ + +S ++IDEAHC S+WGHDFRP+Y+NL + + +VP++ALTATAT KVQ
Sbjct: 132 FLKQAN----ISFVAIDEAHCISEWGHDFRPEYRNLKGIIDKIANVPVIALTATATPKVQ 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
+D+ + L + + F + NRPNLFY VR K V K EI K+I ++ +SGIVYC
Sbjct: 188 DDIQKTLGMSDAVVFKESFNRPNLFYEVRPKVDVEK----EIVKFINKN--KGKSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SRK+ E+ AQ L+ GI+A YHA +D R ++ + VIV T+AFGMGI+KP
Sbjct: 242 LSRKKVEEFAQTLQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSM-----VFYENSG 437
DVRFVIH+ KS+E+YYQE+GRAGRDG CL F+ P D+ + V + G
Sbjct: 302 DVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKSVSEKEVG 361
Query: 438 LQNLYDIVRYS-------QYPLHW 454
LQ L ++V Y+ QY L++
Sbjct: 362 LQLLNEVVGYAETSMSRRQYILYY 385
>gi|254805685|ref|YP_003083906.1| ATP-dependent DNA helicase [Neisseria meningitidis alpha14]
gi|254669227|emb|CBA08061.1| ATP-dependent DNA helicase [Neisseria meningitidis alpha14]
Length = 766
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/334 (47%), Positives = 226/334 (67%), Gaps = 12/334 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG P +R Q+ +IN + G ++V+M GGGKSLCYQ+PA++REG+A+VVSPL++L+
Sbjct: 13 VFGYPEFRGRQEAVINTLAGGGSLMVLMPTGGGKSLCYQIPALMREGVAVVVSPLIALMN 72
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L GI A + S TS ++ I L +G LK+LYV PE++ + RF+ L+
Sbjct: 73 DQVASLHVAGIEAAAVNSGTSADEAHEIADKL--AQGRLKLLYVAPERLV-TDRFLRFLD 129
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC SQWGHDFRP+Y+ LG+L ++P+VP +ALTATA + D+
Sbjct: 130 Q----QTVSLFAIDEAHCVSQWGHDFRPEYQQLGMLAERYPNVPRIALTATADVATRADI 185
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
LH+ +F+S+ +RPN++Y V EK++ K +++ I K + +SGIVYC SR
Sbjct: 186 KHYLHLDDAPEFISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMA-----GQSGIVYCLSR 240
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E VAQ LR+ G++A YHA + ++ RE+ R++ ++V TVAFGMGI+KPDVR
Sbjct: 241 KKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRFTHEDNIIVVATVAFGMGIDKPDVR 300
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFF 419
FV H + +SVE +YQESGRAGRDGLP+ L +
Sbjct: 301 FVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCY 334
>gi|118489987|gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 617
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 226/357 (63%), Gaps = 9/357 (2%)
Query: 80 DDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
DD L +FG +R Q + A ++ +D V+M GGGKSLCYQLPA L+ G+ +V
Sbjct: 201 DDFELANVVIFGNKTFRPLQHQACKATVAKQDCFVLMPTGGGKSLCYQLPATLKPGVTVV 260
Query: 137 VSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
+SPLLSLIQDQ++ L GI A L S + I + L K + K+LYVTPE+I+
Sbjct: 261 ISPLLSLIQDQIITLNLKFGIRATFLNSQQTSAQAAAILQELRKDKPSCKLLYVTPERIA 320
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F+ L+ H G+L+ +DEAHC SQWGHDFRPDYK LG LK FP VP+MALTA
Sbjct: 321 GNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFRPDYKRLGCLKQNFPVVPVMALTA 380
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TAT V+ D+++ L I + ++ +RPNL Y V K+ K + ++ +++ + N
Sbjct: 381 TATHSVREDILKTLRIPGALVLETSFDRPNLKYEVIGKT---KESLKQLGDLLRDRFKN- 436
Query: 316 ESGIVYCFSRKECEQVAQELRQRG-ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
+ GIVYC S+ EC +V++ L ++ I A YYHA + R V +W ++ ++ T+A
Sbjct: 437 QCGIVYCLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQRVDVQRKWHTGEVHIVCATIA 496
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
FGMGI+KPDVRFVIH++LSKS+E+YYQESGRAGRD P+ C+ ++ D R M+
Sbjct: 497 FGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDSHPATCIALYQKKDFSRVVCML 553
>gi|431796165|ref|YP_007223069.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786930|gb|AGA77059.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 708
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 235/351 (66%), Gaps = 11/351 (3%)
Query: 81 DVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPL 140
+V N +G ++R Q+ II ++L +D +V+M GGGKS+CYQ+PA++ +G+ LV+SPL
Sbjct: 6 EVLKNFYGYDSFRGQQEAIIQSILKQQDTIVLMPTGGGKSVCYQIPAMVNDGLTLVISPL 65
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
++L++DQV L +GIPA L S+ S +++F+ + + G+LK+LYV PE++
Sbjct: 66 IALMKDQVDALNGMGIPAAYLNSSQSASEQRFVSEEIR--SGKLKLLYVAPERLFGGAFP 123
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+++ K RLSL++IDEAHC SQWGHDFRPDY +G L+ + PDVP +ALTATA ++
Sbjct: 124 LTETLK---TSRLSLVAIDEAHCVSQWGHDFRPDYLMIGRLRQELPDVPFVALTATADKQ 180
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
+ D+ + L +RK F+S+ +RPN+ Y + K + + ++D + Y SGI+
Sbjct: 181 TRADIADKLGLRKPKWFISSFDRPNITYRIVPKRNSFEKLLDFL------EYHQKNSGII 234
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
YC SRK E +A L+ G+SA YHA +D R ++ K+K++++V T+AFGMGI+
Sbjct: 235 YCLSRKNVEDMAGRLQAAGLSALPYHAGLDRQTRASHQEKFIKDKVKIMVATIAFGMGID 294
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
K +VRFV+H ++ +++E YYQE+GRAGRDGLPS+ LLF+ ADV M+
Sbjct: 295 KSNVRFVVHMNMPQNIEGYYQETGRAGRDGLPSDALLFYSYADVMTLQRMI 345
>gi|323499630|ref|ZP_08104598.1| ATP-dependent DNA helicase RecQ [Vibrio sinaloensis DSM 21326]
gi|323315231|gb|EGA68274.1| ATP-dependent DNA helicase RecQ [Vibrio sinaloensis DSM 21326]
Length = 611
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 236/354 (66%), Gaps = 13/354 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I + + G+D LVIM GGGKSLCYQ+PA++R G+ LV+SPL+SL++
Sbjct: 23 VFGYQEFRDGQQEVIESAVRGQDSLVIMPTGGGKSLCYQIPALVRNGLTLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST +++ +Y + G +K++YV+PE++ + F+ +LE
Sbjct: 83 DQVDQLKANGVAAECVNSTMPRDELISVYNRMNSGA--IKLIYVSPERVLM-RDFIERLE 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP+MALTATA + D+
Sbjct: 140 QLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPVMALTATADDATRKDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
M+ L ++ ++ + +RPN+ Y + EK I ++ ++++ + GI+YC SR
Sbjct: 196 MQRLQLQDPHSYLGSFDRPNIRYTLIEKHKP----ISQVVRFLEGQ--RGQCGIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E V ++L G+ A YHA +D + R V + ++ +Q++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMVTEKLCNNGLRAASYHAGLDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDEGPQ 363
>gi|269964536|ref|ZP_06178775.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus 40B]
gi|269830663|gb|EEZ84883.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus 40B]
Length = 640
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 232/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQ +I+A + GRD LVI+ GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 51 DVFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLM 110
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 111 KDQVDQLKANGVAAECINSTMPREELLSVYNRMHTGH--LKLVYVSPERVLM-RDFIERL 167
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK QF VP MALTATA + D
Sbjct: 168 ENL----PLSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 223
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + +I +Y++ N GI+YC S
Sbjct: 224 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKP----VSQIVRYLETQKGNC--GIIYCGS 277
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 278 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 337
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 338 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 392
>gi|401765702|ref|YP_006580709.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400177236|gb|AFP72085.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 609
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
+S A V FG +R Q+ II VL GRD LV+M GGGKSLCYQ+PA++ G+ +
Sbjct: 10 ESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTV 69
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL+SL++DQV L A G+ A L ST ++E ++ + G+ +++LY+ PE++
Sbjct: 70 VVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQ--VRLLYIAPERLM 127
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
F+ L + L+++DEAHC SQWGHDFRP+Y LG L+ +FP++P MALTA
Sbjct: 128 LDN-FLDHLAHWNPV----LLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTA 182
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA + D++ +L + VS+ +RPN+ YM+ EK +D++ +Y+QE
Sbjct: 183 TADDTTRLDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKP----LDQLLRYVQEQ--RG 236
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
+SGI+YC SR + E A L+ RG SA YHA ++ + R V ++ ++ LQ++V TVAF
Sbjct: 237 KSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 296
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
GMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E +LF+ PAD+
Sbjct: 297 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADM 345
>gi|320157768|ref|YP_004190147.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus MO6-24/O]
gi|319933080|gb|ADV87944.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus MO6-24/O]
Length = 611
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 232/354 (65%), Gaps = 13/354 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQ +I A + G+D LVIM GGGKSLCYQ+PA++R GI LV+SPL+SL++
Sbjct: 23 VFGYQTFREGQQSVIEAAVEGKDSLVIMPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST S++ +Y + G+ LK++YV+PE++ + F+ +LE
Sbjct: 83 DQVDQLKANGVAAECVNSTLSRDALLSVYNRMHAGQ--LKLVYVSPERVLM-RDFIERLE 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y LG LK FP VP MALTATA + D+
Sbjct: 140 NL----PLAMIAVDEAHCISQWGHDFRPEYAALGQLKHHFPHVPFMALTATADDATRKDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ LH+ + ++ + +RPN+ Y + EK + ++ +Y++ N GI+YC SR
Sbjct: 196 LSRLHLNEPHVYLGSFDRPNIRYDLVEKHKP----VSQVIRYLESQKGNC--GIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADITWLRRMLDEKDDGPQ 363
>gi|254230201|ref|ZP_04923594.1| ATP-dependent DNA helicase RecQ [Vibrio sp. Ex25]
gi|151937286|gb|EDN56151.1| ATP-dependent DNA helicase RecQ [Vibrio sp. Ex25]
Length = 633
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 230/354 (64%), Gaps = 13/354 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQE+I A + G+D LVIM GGGKSLCYQ+PA++R GI LV+SPL+SL++
Sbjct: 45 VFGYQTFRDGQQEVIEAAIEGKDSLVIMPTGGGKSLCYQIPALVRSGITLVISPLISLMK 104
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST ++E+ +Y + G+ LK++YV+PE++ + F+ +LE
Sbjct: 105 DQVDQLKANGVAAECVNSTMNREELLSVYNRMHSGQ--LKLVYVSPERVLM-RDFIERLE 161
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
LS+I++DEAHC SQWGHDFRP+Y LG LK F VP MALTATA + D+
Sbjct: 162 NL----PLSMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVPFMALTATADDATRRDI 217
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L + + ++ + +RPN+ Y + EK + +I +Y+ GI+YC SR
Sbjct: 218 LERLRLHEPQVYLGSFDRPNIRYTLVEKHKP----VSQIIRYLATQ--KGSCGIIYCGSR 271
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E V ++L I A YHA MD R V + ++ +Q++V TVAFGMGINKP+VR
Sbjct: 272 KKVEMVTEKLCNNHIRAAGYHAGMDTEERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 331
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 332 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 385
>gi|427400403|ref|ZP_18891641.1| ATP-dependent DNA helicase RecQ [Massilia timonae CCUG 45783]
gi|425720677|gb|EKU83596.1| ATP-dependent DNA helicase RecQ [Massilia timonae CCUG 45783]
Length = 610
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 166/355 (46%), Positives = 229/355 (64%), Gaps = 12/355 (3%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
+RA V VFG PA+R Q EI+ V SG D LV+M GGGKSLCYQ+PA+LR+G+ +V
Sbjct: 11 ARALHVLETVFGYPAFRGQQGEIVEHVASGGDALVLMPTGGGKSLCYQIPALLRDGVGVV 70
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
VSPL++L+QDQV L +G+ A L ST + E+ I + + GE + ++YV PE++
Sbjct: 71 VSPLIALMQDQVDALEEVGVRAAFLNSTQTFEETLRIERLVRSGE--IDLVYVAPERL-M 127
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTAT 256
+ R + E A R+SL +IDEAHC SQWGHDFRP+Y L IL +FP+VP +ALTAT
Sbjct: 128 TPRCLELFE----ASRISLFAIDEAHCVSQWGHDFRPEYIRLSILHERFPNVPRIALTAT 183
Query: 257 ATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSE 316
A Q+ + ++ L + +FVS+ +RPN+ Y + EK++ K +ID +I +P +
Sbjct: 184 ADQQTRAEIAHRLQLEDARQFVSSFDRPNIRYSIVEKTTGRKQLID----FITSEHPQ-D 238
Query: 317 SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFG 376
SGIVYC SRK+ E+ A L + GI A YHA M+ R R+ + + V+V T+AFG
Sbjct: 239 SGIVYCLSRKKVEETADFLNEHGIRAMAYHAGMEHTVRAANQARFLREENIVMVATIAFG 298
Query: 377 MGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
MGI+KPDVRFV H L KS+E YYQE+GRAGRDG P+ + + DV Q M+
Sbjct: 299 MGIDKPDVRFVCHLDLPKSIEGYYQETGRAGRDGQPASAWMAYGLQDVVLQRRMI 353
>gi|91775306|ref|YP_545062.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91775450|ref|YP_545206.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91709293|gb|ABE49221.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91709437|gb|ABE49365.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|167042457|gb|ABZ07183.1| putative DEAD/DEAH box helicase [uncultured marine microorganism
HF4000_ANIW133B20]
Length = 611
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/339 (44%), Positives = 228/339 (67%), Gaps = 8/339 (2%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
FG A+R Q+ I+N V+ G D LV+M GGGKSLCYQ+P++LR G+ +VVSPL++L+Q
Sbjct: 14 TFGYSAFRGEQEAIVNHVVDGGDALVLMPTGGGKSLCYQIPSLLRPGVGIVVSPLIALMQ 73
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L LGI A L S+ + + +Y+AL +GE LK+LYV PE++ + F+S L
Sbjct: 74 DQVDALRQLGIQAAFLNSSLDADTARHVYQALMRGE--LKVLYVAPERL-MTPSFLSTLH 130
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
++L +IDEAHC SQWGHDFRP+Y+ L +L +FP+VP +ALTATA +N++
Sbjct: 131 DIQQRFGIALFAIDEAHCVSQWGHDFRPEYRQLTVLHEEFPEVPRIALTATADTPTRNEI 190
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L + +F+S+ +RPN+ Y V K++ K ++ +++ +PN ++GI+YC SR
Sbjct: 191 VERLGLEHARQFISSFDRPNIRYRVALKNNARK----QLLGFLESEHPN-DAGIIYCLSR 245
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
++ E+ A L+++G A YHA +D R+ R+ + + ++V TVAFGMGI+KP+VR
Sbjct: 246 RKVEETAAWLKEQGWDALPYHAGLDATVRQANQQRFLREEGIIMVATVAFGMGIDKPNVR 305
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
FV+H L KS+E YYQE+GRAGRDGL ++ + + DV
Sbjct: 306 FVVHLDLPKSMEGYYQETGRAGRDGLDADAWMVYGLGDV 344
>gi|91791699|ref|YP_561350.1| ATP-dependent DNA helicase RecQ [Shewanella denitrificans OS217]
gi|91713701|gb|ABE53627.1| ATP-dependent DNA helicase RecQ [Shewanella denitrificans OS217]
Length = 613
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 232/355 (65%), Gaps = 16/355 (4%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG ++R Q+E++ L+G D LVIM GGGKS+CYQLPA+L +G+ +VVSPL+SL++
Sbjct: 26 VFGYRSFREGQREVMERTLAGEDTLVIMPTGGGKSICYQLPALLFQGLTIVVSPLISLMK 85
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L G+PA L S+ +E + + L GE +K+LYV+PE++ + F+ +L+
Sbjct: 86 DQVDSLIQTGVPAAYLNSSQPREVSMNVLRQLHSGE--IKLLYVSPERLLRED-FIERLQ 142
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
H +SL ++DEAHC SQWGHDFRP+Y LG LK FP VP+MALTATA Q + +
Sbjct: 143 HLH----VSLFAVDEAHCISQWGHDFRPEYAELGRLKQLFPHVPLMALTATADQATRKSI 198
Query: 266 MEMLHIRK-CIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
E L+I C+ +S+ +RPN+ Y V EK + ++ ++I NS GI+YC S
Sbjct: 199 CERLNIEPFCL--LSSFDRPNIRYTVAEKLNAAS----QLKQFIASQSGNS--GIIYCSS 250
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
R+ ++VA+ LR +G+ A+ YHA R V ++ K++L ++V TVAFGMGINK +V
Sbjct: 251 RRRVDEVAERLRLQGLKAEAYHAGRSQEERGDVQDKFLKDQLDIVVATVAFGMGINKSNV 310
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H+ + KSVE YYQE+GRAGRDGL +E + F PAD+ R ++ G Q
Sbjct: 311 RFVVHYDIPKSVEAYYQETGRAGRDGLDAEAYMLFDPADIGRVRHLIEQSEPGPQ 365
>gi|209882405|ref|XP_002142639.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
gi|209558245|gb|EEA08290.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
Length = 997
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/399 (42%), Positives = 239/399 (59%), Gaps = 13/399 (3%)
Query: 40 ELKSLLEAFEASRGSPIQYGGSSSTAVENW-SGTFEWDSRADDVRLNVFGIPAYRANQQE 98
E++ + E S IQ ++W S F+W S + +FG ++R NQ+E
Sbjct: 172 EIRDISNFIENRHTSCIQVNSDD----KDWKSNEFDWSSDLYRINEKIFGNRSFRENQRE 227
Query: 99 IINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREG----IALVVSPLLSLIQDQVMCLAAL 154
I+NA++S RDV V+M GGGKSLC+QLP ++ + + +VV PLL+L+ DQ+ L L
Sbjct: 228 IMNAIISQRDVFVMMPTGGGKSLCFQLPGLIPQNPHGSVTVVVMPLLALMVDQIEQLNLL 287
Query: 155 GIPAHMLTSTTSKEDEKFIYKALEKGEGEL--KMLYVTPEKISKSKRFMSKLEKCHHAGR 212
GI L S +KE IY +L G+ + + L+VTPEK+ S+ S L ++ R
Sbjct: 288 GIKCAGLNSNQNKEVVNAIYNSLRNGDPQTCPQFLFVTPEKLKHSEVLFSILHTLNNQSR 347
Query: 213 LSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIR 272
L IDEAHC QWG DFRPDY L L+ +FP+VP++ALTATAT+ + D++ L++
Sbjct: 348 LLRFVIDEAHCVCQWGFDFRPDYIQLCRLREKFPNVPIVALTATATRDILADVIRQLNMV 407
Query: 273 KCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVA 332
+ F + +RPNL Y VR K ++ E+ + I S + + I+YC SR ECE +
Sbjct: 408 NPVVFALSFDRPNLRYEVRPKIGNKAKLVKEVTEII--SKFSHSTCIIYCLSRSECEDIC 465
Query: 333 QELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSL 392
+EL + GISA YYH M R +W ++ QV+V TVAFGMGINK DVR VIH S+
Sbjct: 466 KELIKNGISATYYHGSMKDEKRNIAQKQWMSDEKQVMVATVAFGMGINKKDVRLVIHLSM 525
Query: 393 SKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
KS+E YYQESGRAGRDG+ S C+L++ DV R ++
Sbjct: 526 PKSLENYYQESGRAGRDGMESLCILYYSYKDVVRLQALT 564
>gi|385650929|ref|ZP_10045482.1| ATP-dependent DNA helicase RecQ [Leucobacter chromiiresistens JG
31]
Length = 686
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 223/351 (63%), Gaps = 12/351 (3%)
Query: 81 DVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPL 140
+V VFG A+R Q+EII V+ G D +V+M GGGKS+CYQ+P+++REG +V+SPL
Sbjct: 77 EVLAEVFGYDAFRGEQEEIIRQVIGGGDAVVLMPTGGGKSICYQIPSLVREGTGVVLSPL 136
Query: 141 LSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRF 200
++L+ DQV L +G+ A L S S ED + + +A +G+L +LY+ PE++S
Sbjct: 137 VALMHDQVAALQLVGVRAAALNSAMSIEDRRAVEQAYR--DGQLDVLYLAPERLSAPGTV 194
Query: 201 MSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQK 260
+ GR++L +IDEAHC SQWGHDFRPDY LG L ++PDVP +ALTATAT +
Sbjct: 195 -----ELLAQGRIALFAIDEAHCVSQWGHDFRPDYLRLGALAERWPDVPRIALTATATPE 249
Query: 261 VQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIV 320
++ E LH+++ FVS+ +RPN+ Y + K + ++ ++ + + E+GIV
Sbjct: 250 THREITERLHLQRARHFVSSFDRPNIRYRIESKQNARA----QLVSFVSREH-SGEAGIV 304
Query: 321 YCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGIN 380
Y SRK EQ A LR G+ A YHA + + R R+ + + V+V T+AFGMGI+
Sbjct: 305 YALSRKRVEQTAAALRDAGVDAVAYHAGLPAHVRLDAQTRFLREEGVVVVATIAFGMGID 364
Query: 381 KPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
KPDVRFV H L KSVE YYQE+GRAGRDGLPSE L + DV +Q M+
Sbjct: 365 KPDVRFVAHIDLPKSVEGYYQETGRAGRDGLPSEAWLAYGLQDVVQQRQMI 415
>gi|161486585|ref|NP_935980.2| ATP-dependent DNA helicase RecQ [Vibrio vulnificus YJ016]
Length = 611
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 232/354 (65%), Gaps = 13/354 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQ +I A + G+D LVIM GGGKSLCYQ+PA++R GI LV+SPL+SL++
Sbjct: 23 VFGYQTFREGQQSVIEAAVEGKDSLVIMPTGGGKSLCYQIPALVRPGITLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST S++ +Y + G+ LK++YV+PE++ + F+ +LE
Sbjct: 83 DQVDQLKANGVAAECVNSTLSRDALLSVYNRMHAGQ--LKLVYVSPERVLM-RDFIERLE 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y LG LK FP VP MALTATA + D+
Sbjct: 140 NL----PLAMIAVDEAHCISQWGHDFRPEYAALGQLKHHFPHVPFMALTATADDATRKDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ LH+ + ++ + +RPN+ Y + EK + ++ +Y++ N GI+YC SR
Sbjct: 196 LSRLHLNEPHVYLGSFDRPNIRYDLVEKHKP----VSQVIRYLESQKGNC--GIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADITWLRRMLDEKDDGPQ 363
>gi|448097267|ref|XP_004198627.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359380049|emb|CCE82290.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1415
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/350 (43%), Positives = 224/350 (64%), Gaps = 10/350 (2%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLR----EGIALVVSPLL 141
F + ++R NQ E I + L+GRDV V+M GGGKSLCYQLPA++ G +V+SPL+
Sbjct: 735 TFYLKSFRPNQLEAIVSTLNGRDVFVLMPTGGGKSLCYQLPALISSGKTRGTTIVISPLI 794
Query: 142 SLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFM 201
SL+QDQV L I A M++S S + K + GE L+++Y++PE ++ S+
Sbjct: 795 SLMQDQVQHLLHKNIRAGMISSKGSAAERKSTLEQFRNGE--LQLVYLSPEMVNTSQHIQ 852
Query: 202 SKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKV 261
+ + + + +L+ + +DEAHC S WGHDFRPDYK + + K QFP VP++ALTATA +KV
Sbjct: 853 RIIARLYESRQLARVVVDEAHCVSSWGHDFRPDYKGMSLFKQQFPQVPVIALTATANEKV 912
Query: 262 QNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVY 321
+ D++ L + + + NR NLFY ++ K++ +D I YI N ++GI+Y
Sbjct: 913 RMDIVHHLQMSDPVLLKQSFNRTNLFYEIKWKAAN---FLDWIRDYILTKQQN-KTGIIY 968
Query: 322 CFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINK 381
C S++ CE A L Q G+ YYHA + R ++ W +N++QVI T+AFGMGI+K
Sbjct: 969 CHSKQSCEVTADRLNQWGVRCSYYHAGLSPTERFQIQTDWQQNRIQVICATIAFGMGIDK 1028
Query: 382 PDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
PDVRFVIH + +S+E YYQE+GRAGRDGLPSEC++F+ D +M+
Sbjct: 1029 PDVRFVIHLFIPRSLEGYYQETGRAGRDGLPSECIMFYSYKDARSLQNMI 1078
>gi|340914758|gb|EGS18099.1| hypothetical protein CTHT_0061140 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 2325
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 223/363 (61%), Gaps = 17/363 (4%)
Query: 73 FEWDSRADDVRLNV---FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVL 129
+ W ++DVR + F + +R NQ E INA L+G+D V+M GGGKSLCYQLPA++
Sbjct: 1349 YPW---SEDVRRALKDRFRMSGFRHNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAMV 1405
Query: 130 REG----IALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKAL--EKGEGE 183
G + +VVSPL+SL+ DQV L AL I A+ + I E E
Sbjct: 1406 NSGKTRGMTIVVSPLISLMHDQVEHLKALNIRANTFNGELRSDLRSHILNVFNEENPEHY 1465
Query: 184 LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 243
+++LYVTPE + S F LE + + + + IDEAHC SQWGHDFRPDYK LG L+
Sbjct: 1466 IQLLYVTPEMVVNSVAFRKALESLYRKKKFARLVIDEAHCVSQWGHDFRPDYKQLGELRR 1525
Query: 244 QFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDE 303
+FP VP+MALTATAT+ V D+ L + C F + NRPNL+Y VR K G + +
Sbjct: 1526 KFPGVPVMALTATATRNVIADIKHNLSMENCEVFSQSFNRPNLYYEVRHK---GPHYVRD 1582
Query: 304 IAKYIQESYPNSESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWS 362
I + I YP +SGI+Y SR E A L+++ + +YHA +D + + ++ W
Sbjct: 1583 IGEMIINKYPG-QSGIIYTLSRHAAESTAATLKEKFHLKVRHYHAQIDPSLKVEIQNEWQ 1641
Query: 363 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPA 422
++QV+V T+AFGMGI+KPDVRFVIH ++ KS+E YYQE+GRAGRDG S+C L+F
Sbjct: 1642 SGEIQVVVATIAFGMGIDKPDVRFVIHQNIPKSLEGYYQETGRAGRDGQGSDCYLYFCWQ 1701
Query: 423 DVP 425
DVP
Sbjct: 1702 DVP 1704
>gi|342320631|gb|EGU12570.1| Hypothetical Protein RTG_01103 [Rhodotorula glutinis ATCC 204091]
Length = 979
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 284/483 (58%), Gaps = 45/483 (9%)
Query: 8 QELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLL-----EAFEASRGSPIQYGGSS 62
++L+ +EAE+ + QI++L ++++ + +K + A +A +P + S
Sbjct: 104 EKLQQLEAELASLDNQIRELQRLRNEVRTERDTVKVTIASRKSSAPKAKSAAPSR---PS 160
Query: 63 STAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLC 122
+ AV+ S F W A+ + +++G+ +R Q+ INA L GR+V+ ++ GGGKSL
Sbjct: 161 AGAVDYTSKRFSWSDEAERLAGDIWGVKKWRPGQEGAINATLDGREVVAVLPTGGGKSLI 220
Query: 123 YQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEG 182
+Q+PA+L +G +V++PL+SL+ DQV L A G+ A M+ ++TS+ + K I + + G
Sbjct: 221 FQIPALLSKGTTIVITPLISLMSDQVHNLHARGVAAEMIHASTSQAEIKEIMQRMLGTVG 280
Query: 183 E----------------LKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQ 226
+K++YVTPE+I KSK F++ L+K + AG L+ IDEAHC S
Sbjct: 281 SKGKGKKAAAAMEQAEEVKLVYVTPERIEKSKTFVNTLQKMYDAGLLARFVIDEAHCVSM 340
Query: 227 WGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHI------------RKC 274
GHD+R Y +L LK FP P++A+TATA Q V D++++L + +
Sbjct: 341 QGHDYRTSYLSLQRLKVLFPSTPILAVTATAPQTVVADMLKILTLPANLSPGNAALPKTT 400
Query: 275 IKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQE 334
+ F + + RPNL Y + K S + +D I +I E+ S +GI+Y SR + E + +
Sbjct: 401 VLFTAPLYRPNLRYAIVPKPSSAQTALDAIVDWILENRKGS-TGIIYTLSRADSENLTKG 459
Query: 335 L----RQRG-ISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA-FGMGINKPDVRFVI 388
+ R +G + A +YHA ++ +++VH W K+QV+V T A FG+GI+ P+VRFVI
Sbjct: 460 INGHERAKGKLRAAFYHAYLEDAEKQRVHEMWMSGKIQVVVATSASFGLGIDNPNVRFVI 519
Query: 389 HHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF--YENSGLQNLYDIVR 446
HHSL KS+ Y QESGRAGRDG P++C+ F+R AD R SS+ + + G LY++VR
Sbjct: 520 HHSLPKSLANYQQESGRAGRDGEPADCVTFWRAADASRLSSLTYETFHTGGKDKLYEVVR 579
Query: 447 YSQ 449
+++
Sbjct: 580 FAE 582
>gi|343516209|ref|ZP_08753250.1| ATP-dependent DNA helicase RecQ [Vibrio sp. N418]
gi|342796629|gb|EGU32302.1| ATP-dependent DNA helicase RecQ [Vibrio sp. N418]
Length = 612
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 235/361 (65%), Gaps = 13/361 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V VFG +R+ Q+++I A + G+D LVIM GGGKSLCYQ+PA++REG+ LV+S
Sbjct: 17 AQSVLEQVFGYQQFRSGQEQVIEAAIQGKDSLVIMPTGGGKSLCYQVPALVREGLTLVIS 76
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A + S+ +E+ +Y + G LK++YV+PE++ +
Sbjct: 77 PLISLMKDQVDQLKADGVAAECINSSMPREELISVYNRMNSGA--LKLVYVSPERVLM-R 133
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ +L+ LS+I++DEAHC SQWGHDFRP+Y +LG LK FP VP MALTATA
Sbjct: 134 DFIERLQGV----SLSMIAVDEAHCISQWGHDFRPEYASLGQLKHYFPHVPFMALTATAD 189
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ND++ L + + + ++ + +RPN+ Y + EK + +I +Y+ G
Sbjct: 190 DATRNDIVSRLQLVEPLNYLGSFDRPNIRYTLLEKHKP----VSQIIRYLDTQ--KGHCG 243
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SRK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMG
Sbjct: 244 IIYCGSRKKVEMVTEKLCNNHIRAASYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMG 303
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGL 438
INKP+VRFV H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G
Sbjct: 304 INKPNVRFVAHFDIPRNIESYYQETGRAGRDGLPAEAVMLYDPADISWLRRMLDEKDEGP 363
Query: 439 Q 439
Q
Sbjct: 364 Q 364
>gi|269962279|ref|ZP_06176631.1| ATP-dependent DNA helicase RecQ [Vibrio harveyi 1DA3]
gi|269832982|gb|EEZ87089.1| ATP-dependent DNA helicase RecQ [Vibrio harveyi 1DA3]
Length = 665
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 232/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQ +I+A + GRD LVI+ GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 76 DVFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLM 135
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G LK++YV+PE++ + F+ +L
Sbjct: 136 KDQVDQLKANGVAAECINSTMPREELLSVYNRMHTGH--LKLVYVSPERVLM-RDFIERL 192
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK QF VP MALTATA + D
Sbjct: 193 ENL----PLSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 248
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + +I +Y++ N GI+YC S
Sbjct: 249 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKP----VSQIVRYLETQKGNC--GIIYCGS 302
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 303 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 362
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 363 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 417
>gi|27364385|ref|NP_759913.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus CMCP6]
gi|27360504|gb|AAO09440.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus CMCP6]
Length = 611
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 232/354 (65%), Gaps = 13/354 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQ +I A + G+D LVIM GGGKSLCYQ+PA++R GI LV+SPL+SL++
Sbjct: 23 VFGYQTFREGQQSVIEAAVEGKDSLVIMPTGGGKSLCYQIPALVRPGITLVISPLISLMK 82
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST S++ +Y + G+ LK++YV+PE++ + F+ +LE
Sbjct: 83 DQVDQLKANGVAAECVNSTLSRDALLSVYNRMHAGQ--LKLVYVSPERVLM-RDFIERLE 139
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y LG LK FP VP MALTATA + D+
Sbjct: 140 NL----PLAMIAVDEAHCISQWGHDFRPEYAALGQLKHHFPHVPFMALTATADDATRKDI 195
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ LH+ + ++ + +RPN+ Y + EK + ++ +Y++ N GI+YC SR
Sbjct: 196 LSRLHLNEPHVYLGSFDRPNIRYDLVEKHKP----VSQVIRYLESQKGNC--GIIYCGSR 249
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+VR
Sbjct: 250 KKVEMLTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 309
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADITWLRRMLDEKDDGPQ 363
>gi|260913220|ref|ZP_05919702.1| ATP-dependent helicase RecQ [Pasteurella dagmatis ATCC 43325]
gi|260632807|gb|EEX50976.1| ATP-dependent helicase RecQ [Pasteurella dagmatis ATCC 43325]
Length = 631
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 233/355 (65%), Gaps = 17/355 (4%)
Query: 82 VRLNV----FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVV 137
V LNV FG ++R Q+E+I + L+G+D LVIMA G GKSLCYQ+PA+ +G+ LV+
Sbjct: 25 VALNVLQSTFGYQSFRKGQEEVIESALAGKDSLVIMATGNGKSLCYQIPALCFDGLTLVI 84
Query: 138 SPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKS 197
SPL+SL++DQV L A GI A L S+ + +++ ++ + G LK+LYV+PEK+ +
Sbjct: 85 SPLISLMKDQVDQLLANGIEADYLNSSQTFAEQQNVHSKVM--SGTLKLLYVSPEKV-MT 141
Query: 198 KRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATA 257
F + C ++S I+IDEAHC SQWGHDFRP+Y LG LK FP+ P+MALTATA
Sbjct: 142 NSFFHLISHC----KVSFIAIDEAHCISQWGHDFRPEYTQLGGLKHAFPNAPIMALTATA 197
Query: 258 TQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSES 317
+ D++ L + + ++ + +RPN+ Y + EK ++++ +++ +S
Sbjct: 198 DHATRQDILVHLKLEQPYIYIGSFDRPNIRYTLIEKYK----PMEQLCRFVLGQ--KGKS 251
Query: 318 GIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGM 377
GI+YC SR + E+VA+ LR +G+ A YHA M+ RE V + ++ LQV+V T+AFGM
Sbjct: 252 GIIYCNSRNKVERVAESLRNKGVKAQAYHAGMETTQREDVQRAFQRDDLQVVVATIAFGM 311
Query: 378 GINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVF 432
GINK +VRFV H L +S+E+YYQE+GRAGRD LP+E +LF+ PAD ++F
Sbjct: 312 GINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILF 366
>gi|453362794|dbj|GAC81320.1| ATP-dependent DNA helicase RecQ [Gordonia malaquae NBRC 108250]
Length = 610
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 16/359 (4%)
Query: 77 SRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
S +V VFG +R +Q++I++ V+SG D +V+M GGGKSLCYQ+PA++R+G A+V
Sbjct: 2 STPHEVLRTVFGYEQFRGDQEQIVSQVVSGGDAVVLMPTGGGKSLCYQVPALIRDGCAVV 61
Query: 137 VSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
VSPL++L+ DQV L LG+ A L ST S E+ +A GE L ++YV PE +S+
Sbjct: 62 VSPLIALMSDQVGALRQLGVRAAYLNSTQSSEERSATERAYLAGE--LDLIYVAPEGLSR 119
Query: 197 --SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALT 254
++ F+S+ G+LSLI+IDEAHC SQWGHDFRPDY LG L +PDVP +ALT
Sbjct: 120 PYTRDFLSR-------GKLSLIAIDEAHCVSQWGHDFRPDYLALGDLAELWPDVPRIALT 172
Query: 255 ATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPN 314
ATAT++ ++ E LH++ FVS+ +RPN+ Y + K+ K ++D I E +
Sbjct: 173 ATATRRTHEEITERLHLQNARHFVSSFDRPNITYRIEPKNQPTKQLLDFIRT---EGVVD 229
Query: 315 SE--SGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
E +GIVY SRK E A L + GI+A YHA +D R++ R+ + V+V T
Sbjct: 230 GEQATGIVYALSRKSVESTAAYLVKNGINALPYHAGLDKRLRDETLHRFLREDGIVVVAT 289
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
+AFGMGI+KPDVRFV H L KSVE YYQE+GRAGRDGLPS + + ADV +Q ++
Sbjct: 290 IAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGLPSVAWMAYGLADVVQQQRLI 348
>gi|399018929|ref|ZP_10721080.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. CF444]
gi|398098859|gb|EJL89138.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. CF444]
Length = 614
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 162/358 (45%), Positives = 234/358 (65%), Gaps = 12/358 (3%)
Query: 74 EWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGI 133
E SRA + VFG ++R Q +I+ V+ G D LV+M GGGKSLCYQ+PA++R+G+
Sbjct: 11 EQQSRALHILETVFGYSSFRGQQGDIVRHVVQGGDALVLMPTGGGKSLCYQIPALVRDGV 70
Query: 134 ALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEK 193
+VVSPL++L+QDQV LA +G+ A L ST + ++ I + + G+ L +LYV PE+
Sbjct: 71 GVVVSPLIALMQDQVDALAEVGVRAAFLNSTQTFDEAMQIERRVRSGD--LDVLYVAPER 128
Query: 194 ISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMAL 253
+ + R + LE H ++L +IDEAHC SQWGHDFRP+Y L +L +FP+VP +AL
Sbjct: 129 L-MTPRCLELLEAAH----IALFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPNVPRIAL 183
Query: 254 TATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYP 313
TATA Q+ + +++ L + +FVS+ +RPN+ Y + EK++ K ++D I ES
Sbjct: 184 TATADQQTREEIIHRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFI-----ESEH 238
Query: 314 NSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTV 373
++G+VYC SRK+ E+ A+ L+Q GI+A YHA MD R R+ + V+V T+
Sbjct: 239 ADDAGVVYCLSRKKVEETAEFLKQSGINALPYHAGMDYAKRTANQARFLREDKIVMVATI 298
Query: 374 AFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
AFGMGI+KPDVRFV H L KS+E YYQE+GRAGRDGLP+ + + DV +Q M+
Sbjct: 299 AFGMGIDKPDVRFVAHLDLPKSIEGYYQETGRAGRDGLPANAWMAYGLQDVVQQRRMI 356
>gi|307107282|gb|EFN55525.1| hypothetical protein CHLNCDRAFT_133956 [Chlorella variabilis]
Length = 817
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/354 (46%), Positives = 219/354 (61%), Gaps = 20/354 (5%)
Query: 80 DDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSP 139
D L VFG ++R+ Q++II A LSGRD V+M GGGKSL YQLPAVL G+ +VV+P
Sbjct: 276 DYANLKVFGNSSFRSEQRQIIEAALSGRDCFVLMPTGGGKSLTYQLPAVLTPGVTVVVTP 335
Query: 140 LLSLIQDQVMCLAAL---GIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISK 196
LLSL+QDQV L L G+P L+S + + + ++ L K +K+LYVTPE++ +
Sbjct: 336 LLSLMQDQVQALTLLPSGGVPTTYLSSQQTVAETRAVFLELGKARPTIKLLYVTPEQLVR 395
Query: 197 SKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQ-FPDVPMMALTA 255
+R L H G L+ + +DEAHC S WGHDFRPDYK LG +K+ VPMMALTA
Sbjct: 396 GERLKGALRALHSHGLLARLVVDEAHCVSAWGHDFRPDYKQLGAVKSSCLRGVPMMALTA 455
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFY---MVREKSSVGKVVIDEIAKYIQESY 312
TAT KV+ D+M LH+ +F + RPNL + R + S + ++E+ YIQ
Sbjct: 456 TATPKVRQDIMSTLHMAAPRQFQVSFFRPNLCFRKDYTRSEDSGLEGYMEEMMVYIQNH- 514
Query: 313 PNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGT 372
SGIVYC SR E A HA M R +V W ++QV+V T
Sbjct: 515 -REGSGIVYCLSRDNTETSAA-----------VHAGMTPKQRMQVQNDWRTGRVQVVVAT 562
Query: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
+AFGMG++K DVR+VIH +LSKS+E YYQE+GRAGRDG P+ECLL++ DVPR
Sbjct: 563 IAFGMGVDKADVRYVIHFTLSKSMEGYYQEAGRAGRDGGPAECLLYYAKRDVPR 616
>gi|163803190|ref|ZP_02197072.1| ATP-dependent DNA helicase RecQ [Vibrio sp. AND4]
gi|159173011|gb|EDP57845.1| ATP-dependent DNA helicase RecQ [Vibrio sp. AND4]
Length = 611
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 231/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG A+R QQ +I+A + GRD LVI+ GGGKSLCYQ+PA++R GI +V+SPL+SL+
Sbjct: 22 DVFGYQAFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITIVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E +Y + G LK++YV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECINSTMPRETLLSVYNRMHTGH--LKLVYVSPERVLM-RDFIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK QF VP MALTATA + D
Sbjct: 139 ENLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKRQFSHVPFMALTATADDATRRD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + ++ +Y+ N GI+YC S
Sbjct: 195 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKP----VSQVVRYLDTQKGNC--GIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQDAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 363
>gi|359437026|ref|ZP_09227101.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
gi|358028285|dbj|GAA63350.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
Length = 607
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 235/341 (68%), Gaps = 13/341 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R Q +I+A ++G+D LV++ GGGKS+CYQ+PA++ EG+ +V+SPL+SL+Q
Sbjct: 22 VFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L ALG+ A + ++ ++E+ + +Y+ L +G +K+LYV PEK+ + F+ +L
Sbjct: 82 DQVAQLQALGVKAAYINNSLAREERQLVYQQLH--QGLIKLLYVAPEKVLQHD-FLERLS 138
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
+ +SL +IDEAHC S WGHDFRP Y L LK +F VPMMALTATA + + D+
Sbjct: 139 HLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRFDI 194
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+E L +++ + +RPN+ Y + EK K ++ ++ +Y++E ++SGI+YC SR
Sbjct: 195 VEQLKLQQPYIHTGSFDRPNIRYTIEEKF---KPMV-QLLRYLKEQ--KNQSGIIYCTSR 248
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K + +A++L G++A YHA M R+ V ++++ +Q++V TVAFGMGINKP+VR
Sbjct: 249 KRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVR 308
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR 426
FV+H+ + KS+E YYQE+GRAGRDGL +E +++F PAD+ R
Sbjct: 309 FVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGR 349
>gi|329297040|ref|ZP_08254376.1| ATP-dependent DNA helicase RecQ [Plautia stali symbiont]
Length = 607
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 230/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A V + FG +R QQ II LSGRD LV+M GGGKSLCYQ+PA++REG+ LVVS
Sbjct: 13 AQQVLQDTFGYQQFRPGQQTIIETALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST ++E ++ ++ G+ L++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLLANGVAAACLNSTQTREQQQQVFADCRSGK--LRLLYIAPERLMMDN 130
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
F+ L+ + ++++DEAHC SQWGHDFRP+Y LG L+ + +P+MALTATA
Sbjct: 131 -FLDTLQHWNPV----MLAVDEAHCISQWGHDFRPEYGALGQLRQRILQLPVMALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +ND++ +L + + +S+ +RPN+ Y + EK +++ +Y+Q+ +SG
Sbjct: 186 EATRNDIVHLLQMHDPLIQISSFDRPNIRYTLVEKFKP----TEQLLRYVQDQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RGIS YHA +D R +V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGISVGAYHAGIDSEQRARVQEAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADM 345
>gi|344202287|ref|YP_004787430.1| ATP-dependent DNA helicase RecQ [Muricauda ruestringensis DSM
13258]
gi|343954209|gb|AEM70008.1| ATP-dependent DNA helicase RecQ [Muricauda ruestringensis DSM
13258]
Length = 695
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 334/634 (52%), Gaps = 63/634 (9%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG + NQQ I+N++L G D+L IM GGGKS+C+QLPA+L G A+VVSPL++L++D
Sbjct: 16 FGFDTFLPNQQAIVNSILEGNDLLGIMPTGGGKSVCFQLPALLLHGTAIVVSPLIALMKD 75
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L A GIPA S+ + E + I K L E +K+LYV PE + F+++
Sbjct: 76 QVDALQANGIPATFYNSSQAAEAQSEILKKLRAQE--IKLLYVAPESLPHLMPFLTE--- 130
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+SL ++DEAHC S WGHDFRP Y LG LK FP+VP+ A TATA Q+D++
Sbjct: 131 ----DNVSLFAVDEAHCISAWGHDFRPAYTQLGKLKEVFPNVPIAAFTATADSATQDDIL 186
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
+ L+I + +++ +R NLF VR G +I +++++ +SGI+YC SRK
Sbjct: 187 KQLNITNAERHIASFDRKNLFLEVRP----GTNRFTQIVRFLEQR--TDQSGIIYCLSRK 240
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
E++A++L G A YHA MD AR +V + ++ +IV T+AFGMGI+K +VR+
Sbjct: 241 GTEKLAEKLNNNGFKAQAYHAGMDTEARNQVQEDFVNDRTPIIVATIAFGMGIDKSNVRW 300
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVR 446
VIH+++ K++E+YYQE GR+GRD LP+ LLF+ +DV + + + L + R
Sbjct: 301 VIHYNMPKNIESYYQEIGRSGRDRLPANTLLFYSFSDVIQLRKFIEESETKEVQLAKLER 360
Query: 447 YSQYPLHWNIEKVRLV----------------------IFEKLQQVNLFCMVVLAGHAQC 484
Q+ + ++ L+ F+ C V Q
Sbjct: 361 MQQFAEALSCRRIALLNYFGEHVSENCGNCDNCKTPPQFFDGTILTQKVCSAVYRLKEQV 420
Query: 485 IISLLQDIQDNNQRLTMLQLVDK--MKIKLKEIDSDLKREEIEQLVLQLIIDRVL-VRIG 541
+++L D+ Q Q+ DK IK D+ ++++Q ++Q++ +L +R
Sbjct: 421 ALTMLVDVLRGAQN---AQVFDKGYQNIKTYGTVKDVSWQDLQQYIIQMVNQGILEIRFH 477
Query: 542 P-----FSP-GKKII----KLEISSVQK--NTADNKKSTKRSLTSSALEFELDELRKELA 589
+P K+I+ K++++++QK T+ K+S K + L +L LR E+A
Sbjct: 478 ENGRLLLTPLAKQILFEGRKVQLATLQKAEKTSQGKRSDKTQ--TVGLFDKLKALRTEIA 535
Query: 590 SISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKYGSRILEVISKCG 649
+ + + V S +R + A P T E +G+ K KY +R L+VI+
Sbjct: 536 -VEENVPAYIVFSDAALRDMEAILPETETEFMQ---VSGVGEAKKDKYATRFLKVINAWA 591
Query: 650 NSEQQHDNNAVSKEEQGRDAR--ASKRTKKEKAV 681
S++ + S E+G A++R KE +
Sbjct: 592 ASKKSTQGLSFSLFEKGMTVADIATQRELKEDTI 625
>gi|399033938|ref|ZP_10732419.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398067770|gb|EJL59249.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 703
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 213/606 (35%), Positives = 331/606 (54%), Gaps = 79/606 (13%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG +R NQ+ IIN +LSG+D L IM GGGKS+C+QLPA++ GI +V+SPL++L++D
Sbjct: 14 FGFEKFRPNQETIINTILSGQDTLAIMPTGGGKSICFQLPALVLPGITIVISPLIALMKD 73
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L A GI A + S+ S E+++F + L+ K++Y+ PE +S ++L
Sbjct: 74 QVDSLKANGISACYINSSQSSEEQQFYIENLK--SNTFKLVYIAPESLSYLDVIFNEL-- 129
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+SLI+IDEAHC S WGHDFRP Y NLG LK++FP P++ALTATA + + D+
Sbjct: 130 -----TISLIAIDEAHCISSWGHDFRPAYTNLGYLKSRFPSTPILALTATADKATRTDIT 184
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
+ L+++ FV++ +R NL VR K +ID + E+ PN ESGI+YC SRK
Sbjct: 185 KQLNLKNPKTFVASFDRKNLSLEVRPALDRVKQIIDFV-----ENKPN-ESGIIYCLSRK 238
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
E++A++L++ GI+A YHA ++ R K + + QV+ T+AFGMGI+K +VR+
Sbjct: 239 TTEELAEKLQKSGITAKAYHAGLENKLRAKTQDEFINDDCQVVCATIAFGMGIDKSNVRW 298
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQN---LYD 443
VIH++L K++E YYQE GRAGRDGLP+E +LF ADV + + + GL + L
Sbjct: 299 VIHYNLPKNIEGYYQEIGRAGRDGLPAETVLFESYADVIQLQK---FASEGLNSDVQLAK 355
Query: 444 IVRYSQYPLHWNI-EKVRLVIFEKLQQVN------------LFCMVVLAGHAQCIISLLQ 490
+ R QY + K+ L F +L N F +LA A I+ LQ
Sbjct: 356 LDRMKQYADALSCRRKILLSYFGELVTENCGNCDICKKPPVFFDGTILAQKALSAITRLQ 415
Query: 491 DIQDNNQRLTMLQLVDKMK--------------IKLKEIDSDLKREEIEQLVLQLII--- 533
+ + + +VD ++ +K I +D+ + Q ++QLI
Sbjct: 416 ESE------PLAVIVDFLRGSKNAYIYEKNYQDLKTYGIGADISWYDWNQYLIQLINLGY 469
Query: 534 --------DRVLVRIGPFSPGKKII----KLEISSVQKNTADNK--KSTKRSLTSSALEF 579
+++L + PF+ KK++ K+++++V K D K K T ++L
Sbjct: 470 CEIAFHQHNKIL--LTPFA--KKVLFEGEKVKLTTVIKKVIDKNEIKEAKAKATKNSLFE 525
Query: 580 ELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKIIGKLKTGKYGS 639
L +LR E+A + + + + S +R + +P + EE + +GK K KYGS
Sbjct: 526 TLRKLRYEIA-LEDEVPAYVIFSDAALRQMETLRPMSDEEFLAIDG---VGKAKLEKYGS 581
Query: 640 RILEVI 645
+ I
Sbjct: 582 EFINAI 587
>gi|238918098|ref|YP_002931612.1| ATP-dependent DNA helicase RecQ, putative [Edwardsiella ictaluri
93-146]
gi|238867666|gb|ACR67377.1| ATP-dependent DNA helicase RecQ, putative [Edwardsiella ictaluri
93-146]
Length = 609
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 231/346 (66%), Gaps = 13/346 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+ V + FG +R QQ I+ A ++GRD LV+M GGGKSLCYQ+PA++R+G+ +VVS
Sbjct: 13 AEGVLKDTFGYQQFRPGQQAIVEAAIAGRDCLVVMPTGGGKSLCYQIPALVRDGLTIVVS 72
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL+SL++DQV L A G+ A L ST S+E ++ +Y GE +++LY+ PE++
Sbjct: 73 PLISLMKDQVDQLQANGVNAACLNSTLSREQQQAVYAGCRSGE--IRLLYIAPERL---- 126
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
M L +L+++DEAHC SQWGHDFRP+Y LG +K +FP +P++ALTATA
Sbjct: 127 -MMDNLLDTLPQWNPTLLAVDEAHCISQWGHDFRPEYSALGQIKHRFPQMPVIALTATAD 185
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ D++ +L +R + VS+ +RPN+ Y + EK +D++ ++Q +SG
Sbjct: 186 DATRQDILRLLDLRDPLVQVSSFDRPNIRYTLIEKFKP----LDQLWHFVQSQ--RGKSG 239
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
I+YC SR + E A L+ RG+S YHA +D R +V + ++ LQ++V TVAFGMG
Sbjct: 240 IIYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNGRRAEVQEAFQRDDLQIVVATVAFGMG 299
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADV 424
INKP+VRFV+H + +++E+YYQE+GRAGRDGLP+E LLF+ PAD+
Sbjct: 300 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLFYDPADM 345
>gi|37200123|dbj|BAC95951.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus YJ016]
Length = 625
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 232/354 (65%), Gaps = 13/354 (3%)
Query: 86 VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQ 145
VFG +R QQ +I A + G+D LVIM GGGKSLCYQ+PA++R GI LV+SPL+SL++
Sbjct: 37 VFGYQTFREGQQSVIEAAVEGKDSLVIMPTGGGKSLCYQIPALVRPGITLVISPLISLMK 96
Query: 146 DQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLE 205
DQV L A G+ A + ST S++ +Y + G+ LK++YV+PE++ + F+ +LE
Sbjct: 97 DQVDQLKANGVAAECVNSTLSRDALLSVYNRMHAGQ--LKLVYVSPERVLM-RDFIERLE 153
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDL 265
L++I++DEAHC SQWGHDFRP+Y LG LK FP VP MALTATA + D+
Sbjct: 154 NL----PLAMIAVDEAHCISQWGHDFRPEYAALGQLKHHFPHVPFMALTATADDATRKDI 209
Query: 266 MEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSR 325
+ LH+ + ++ + +RPN+ Y + EK + ++ +Y++ N GI+YC SR
Sbjct: 210 LSRLHLNEPHVYLGSFDRPNIRYDLVEKHKP----VSQVIRYLESQKGNC--GIIYCGSR 263
Query: 326 KECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVR 385
K+ E + ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+VR
Sbjct: 264 KKVEMLTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 323
Query: 386 FVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
FV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 324 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADITWLRRMLDEKDDGPQ 377
>gi|443309958|ref|ZP_21039633.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
gi|442780011|gb|ELR90229.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
Length = 724
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 161/369 (43%), Positives = 243/369 (65%), Gaps = 15/369 (4%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++R QQ+II L+ +D+LV+M GGGKSLC+QLPA+LR+G+ +VVSPL++L+QD
Sbjct: 15 FGYTSFRLGQQQIIEQALNNQDLLVVMPTGGGKSLCFQLPALLRKGLTVVVSPLIALMQD 74
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
QV L GI A L ST + + +A+ G++K+LYV PE++ S RF+ ++
Sbjct: 75 QVQSLRNNGIGATFLNSTLTTYQVRSREEAIL--SGKVKLLYVAPERL-LSDRFLPFIDL 131
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
H ++ +IDEAHC S+WGHDFRPDY+ L L+ ++P+VP +ALTATAT +V++D++
Sbjct: 132 VQHQIGIASFAIDEAHCVSEWGHDFRPDYRQLRALRQRYPNVPTIALTATATDRVRSDII 191
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
+ L++ K I V++ NRPNL+Y V+ K K +++ + + + + +GI+YC SR+
Sbjct: 192 QQLNLTKPIIHVASFNRPNLYYDVQPKQ---KQAYNQLKQLVTK---HEGAGIIYCLSRR 245
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
+ + + +L+Q GISA YHA + RE R+ ++ +++V TVAFGMGINKPDVRF
Sbjct: 246 KVDDITMKLQQDGISALPYHAGLSDAERESNQTRFIRDDARLMVATVAFGMGINKPDVRF 305
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPR------QSSMVFYENSGLQN 440
VIH+ L +++E+YYQESGRAGRDG + C +FF DV Q + V + Q
Sbjct: 306 VIHYDLPRNIESYYQESGRAGRDGGAARCTIFFGYGDVKTVEYLIDQKTDVQEQRIAKQQ 365
Query: 441 LYDIVRYSQ 449
L I+ Y+Q
Sbjct: 366 LRQIIDYAQ 374
>gi|115486585|ref|NP_001068436.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|77552472|gb|ABA95269.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|113645658|dbj|BAF28799.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|125535256|gb|EAY81804.1| hypothetical protein OsI_36975 [Oryza sativa Indica Group]
gi|125568785|gb|EAZ10300.1| hypothetical protein OsJ_00135 [Oryza sativa Japonica Group]
Length = 588
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 163/363 (44%), Positives = 221/363 (60%), Gaps = 11/363 (3%)
Query: 80 DDVRLN---VFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALV 136
DD+ +FG ++R Q E A +S D V+M GGGKSLCYQLPA L G+ +V
Sbjct: 172 DDINFANVVIFGNKSFRPLQYEACRAAVSNMDTFVLMPTGGGKSLCYQLPATLHPGVTVV 231
Query: 137 VSPLLSLIQDQVMCLA-ALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
V PLLSLI+DQ++ L IPA L S + + + L G+ K+LYVTPE+++
Sbjct: 232 VCPLLSLIEDQIVALNFKFAIPAAFLNSQQTPSQSSAVIQELRSGKPSFKLLYVTPERMA 291
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ F+ L H G L+ IDEAHC SQWGHDFRPDY+ LG LK FP VP+MALTA
Sbjct: 292 GNSSFIGILIGLHQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCLKQNFPRVPIMALTA 351
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TAT V D++ L I + +R NL Y V K+ K ++ ++E + N
Sbjct: 352 TATASVCKDILSTLRIPNATVLKRSFDRTNLNYEVIGKT---KTPQKQLGDLLKERFMNM 408
Query: 316 ESGIVYCFSRKECEQVAQELRQR-GISADYYHADMDINAREKVHMRWSKNKLQVIVGTVA 374
SGIVYC S+ EC A+ LR++ I +YHA + R V +W +++VI T+A
Sbjct: 409 -SGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAARQRSNVQGKWHSGEVKVICATIA 467
Query: 375 FGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYE 434
FGMGI+KPDVRFVIH+++SKS+E+YYQESGRAGRD LP+ C++ ++ D+ R M+
Sbjct: 468 FGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNLPAHCIVLYQKKDLGRIVCML--R 525
Query: 435 NSG 437
NSG
Sbjct: 526 NSG 528
>gi|319945102|ref|ZP_08019364.1| ATP-dependent helicase RecQ [Lautropia mirabilis ATCC 51599]
gi|319741672|gb|EFV94097.1| ATP-dependent helicase RecQ [Lautropia mirabilis ATCC 51599]
Length = 607
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 230/353 (65%), Gaps = 12/353 (3%)
Query: 79 ADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVS 138
A+D+ VFG PA+R Q +II V G + LV+M GGGKSLCYQ+PA++REG+ +VVS
Sbjct: 3 AEDILHQVFGYPAFRGLQHDIIEHVAGGGNALVLMPTGGGKSLCYQIPALMREGVGIVVS 62
Query: 139 PLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSK 198
PL++L+QDQV L LG+ A L S+ S + I + L +GELK+LYV PE++ ++
Sbjct: 63 PLIALMQDQVAALRELGVAAAYLNSSLSAAEAADIERQLR--QGELKLLYVAPERL-LTE 119
Query: 199 RFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATAT 258
R ++ L +C +L+LI+IDEAHC SQWGHDFRP+Y LG L +FP VP +ALTATA
Sbjct: 120 RCLALLHRC----QLALIAIDEAHCVSQWGHDFRPEYIGLGRLADEFPAVPRIALTATAD 175
Query: 259 QKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESG 318
+ +++ L ++ FV++ +RPN+ Y + EK + ++ ++I++ + ESG
Sbjct: 176 DLTRREIVNRLALQDAEPFVTSFDRPNIRYRIIEKRDGNQ----QLLRFIRDGH-EGESG 230
Query: 319 IVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMG 378
IVYC SR EQVA L++ G A YHA ++ R V + + ++V T+AFGMG
Sbjct: 231 IVYCASRNRTEQVAAFLQEEGFHARAYHAGLEAAERSDVQAAFQREDGMIVVATIAFGMG 290
Query: 379 INKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
I+KPDVRFV H L +S+E YYQE+GRAGRDGLP+E + + DV +Q +
Sbjct: 291 IDKPDVRFVAHVDLPRSIEAYYQETGRAGRDGLPAEVWMAYGLHDVVQQRRFI 343
>gi|300777720|ref|ZP_07087578.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
gi|300503230|gb|EFK34370.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
Length = 734
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 245/384 (63%), Gaps = 30/384 (7%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG ++ Q++II+ +L G+D+ V+M GGGKSLCYQLPA++ EG A+VVSPL++L+++
Sbjct: 16 FGFSTFKGQQEQIIDNLLGGKDIFVLMPTGGGKSLCYQLPALISEGTAIVVSPLIALMKN 75
Query: 147 QVMCLAAL----GIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMS 202
QV + L G+ AH+L S+ +K K ++ ++ G+ K+LYV PE + K ++
Sbjct: 76 QVDAVNGLSSDDGV-AHVLNSSLNKTQTKQVFDDIK--SGKTKLLYVAPESLIKDD-YLD 131
Query: 203 KLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQ 262
L++ ++S +IDEAHC S+WGHDFRP+Y+NL + + +VP++ALTATAT KVQ
Sbjct: 132 FLKEV----KISFFAIDEAHCISEWGHDFRPEYRNLKQIIDKIANVPVIALTATATPKVQ 187
Query: 263 NDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYC 322
+D+ + L + + F + NRPNL+Y VR K +V K EI K+I + +SGIVYC
Sbjct: 188 DDIQKTLGMTNALVFKESFNRPNLYYEVRPKVNVDK----EIVKFINQH--KGKSGIVYC 241
Query: 323 FSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKP 382
SR++ E+ AQ L+ GI+A YHA +D R ++ ++ VIV T+AFGMGI+KP
Sbjct: 242 LSRRKVEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDKP 301
Query: 383 DVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSM-----VFYENSG 437
DVRFVIH+ KS+E+YYQE+GRAGRDG CL F+ P D+ + V G
Sbjct: 302 DVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREIG 361
Query: 438 LQNLYDIVRYS-------QYPLHW 454
LQ L ++V Y+ QY L++
Sbjct: 362 LQLLNEVVGYAETSMSRRQYILYY 385
>gi|134095872|ref|YP_001100947.1| ATP-dependent DNA helicase [Herminiimonas arsenicoxydans]
gi|133739775|emb|CAL62826.1| ATP-dependent DNA helicase RecQ [Herminiimonas arsenicoxydans]
Length = 608
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 228/347 (65%), Gaps = 12/347 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG ++R Q EI++ V G D LV+M GGGKSLCYQ+P++LR+G+ +V+SPL++L+
Sbjct: 18 SVFGYSSFRGEQAEIVDLVTRGGDALVLMPTGGGKSLCYQIPSLLRDGVGVVISPLIALM 77
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
QDQV LA +G+ A L ST + E+ I + L G+ L ++YV PE++ + R + L
Sbjct: 78 QDQVDALAEVGVRAAFLNSTQTFEESSRIERRLRSGD--LDLVYVAPERL-MTPRCLDLL 134
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E A +++L +IDEAHC SQWGHDFRP+Y L IL +FP+VP +ALTATA + + +
Sbjct: 135 E----ASKIALFAIDEAHCVSQWGHDFRPEYIRLSILHERFPNVPRIALTATADHQTREE 190
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
+ L + FVS+ +RPN+ Y + EK++ K V+D I ES ++GIVYC S
Sbjct: 191 IAHRLQLDNARMFVSSFDRPNIRYQIVEKANGRKQVLDFI-----ESEHAGDAGIVYCLS 245
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E+ A+ LR+ GISA YHA MD R K R+ + + V+V T+AFGMGI+KPDV
Sbjct: 246 RKKVEETAEFLRENGISALPYHAGMDFATRSKNQARFLREESIVMVATIAFGMGIDKPDV 305
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMV 431
RFV H L KS+E YYQE+GRAGRDG + + + DV +Q M+
Sbjct: 306 RFVAHLDLPKSIEGYYQETGRAGRDGAAANAWMAYGLQDVVQQRRMI 352
>gi|320539379|ref|ZP_08039048.1| ATP-dependent DNA helicase [Serratia symbiotica str. Tucson]
gi|320030504|gb|EFW12514.1| ATP-dependent DNA helicase [Serratia symbiotica str. Tucson]
Length = 618
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 239/371 (64%), Gaps = 20/371 (5%)
Query: 55 PIQYGGS-SSTAVENWSGTFEWDSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIM 113
PI+ G S+TAV N + R V + FG +R QQ IINA + G+D LV+M
Sbjct: 2 PIKMGMCVSTTAVINR------ELRVTQVLRDTFGYQQFRPGQQAIINAAIEGQDCLVVM 55
Query: 114 AAGGGKSLCYQLPAVLREGIALVVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFI 173
GGGKSLCYQ+PA++ +G+ LVVSPL+SL++DQV L A G+ A ST ++E +
Sbjct: 56 PTGGGKSLCYQIPALVMDGLTLVVSPLISLMKDQVDQLLAYGVSAACYNSTQTREQQLAA 115
Query: 174 YKALEKGEGELKMLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRP 233
G++K+LY+ PE++ F+ L +C ++++DEAHC SQWGHDFRP
Sbjct: 116 MAGCR--SGQIKLLYIAPERLMMDS-FLDSLGRCPPV----ILAVDEAHCISQWGHDFRP 168
Query: 234 DYKNLGILKTQFPDVPMMALTATATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREK 293
+Y+ LG LK +FP +P++ALTATA + + D++ +L + K + VS+ +RPN+ Y + EK
Sbjct: 169 EYRALGQLKQRFPAMPVIALTATADESTRGDIVRLLALHKPLVQVSSFDRPNIRYTLVEK 228
Query: 294 SSVGKVVIDEIAKYIQESYPNSESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINA 353
+D++ ++Q +SGI+YC SR + E L+ RG+S YHA +D +
Sbjct: 229 FKP----LDQLWHFVQGQ--RGKSGIIYCNSRAKVEDTTARLQSRGLSVGAYHAGLDNDR 282
Query: 354 REKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPS 413
R +V + ++ LQV+V TVAFGMGINKP+VRFV+H + +++E+YYQE+GRAGRDGLP+
Sbjct: 283 RAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA 342
Query: 414 ECLLFFRPADV 424
E LL + P+D+
Sbjct: 343 EALLLYDPSDM 353
>gi|39996003|ref|NP_951954.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens PCA]
gi|39982768|gb|AAR34227.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens PCA]
Length = 603
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 207/616 (33%), Positives = 329/616 (53%), Gaps = 76/616 (12%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
VFG ++R Q+EI++ V G D V+M GGGKSLCYQ+P+++R G+ +V+SPL+SL+
Sbjct: 11 TVFGYRSFRPFQEEIVDRVARGGDTFVLMPTGGGKSLCYQIPSLVRPGVGIVISPLISLM 70
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L G+ A ST + + + + L GE L +LYV PE++ + F+ +L
Sbjct: 71 KDQVDALRENGVAAACYNSTLGERESRRVLARLHGGE--LDLLYVAPERL-MTDAFLERL 127
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
+ ++L +IDEAHC SQWGHDFRP+Y LG L+ FP VPM+ALTATA + + D
Sbjct: 128 REIP----IALFAIDEAHCVSQWGHDFRPEYVELGRLRGLFPTVPMIALTATADAQTRGD 183
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++ L +R FV+ +RPN+ Y V EK + + + +A + P E+GIVYC S
Sbjct: 184 IVTRLGLRDAEMFVTGFDRPNIRYSVLEKQKPFRQLEEFLA-----TRPR-EAGIVYCLS 237
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK E+VA++LR G+ A YHA + R +V + ++ ++V+V TVAFGMGI+KP+V
Sbjct: 238 RKRVEEVAEKLRAAGVEAGAYHAGLADAERSRVQEAFLRDDIRVVVATVAFGMGIDKPNV 297
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSG------- 437
RFV+H+ L K++E+YYQE+GRAGRDGLP+E LL F D+P S++ E+ G
Sbjct: 298 RFVVHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIPVSRSLI--ESGGNPEQVRI 355
Query: 438 -LQNLYDIVRYSQYPLHWNIEKVRLVIFEKLQQVNLFCMVVLAG--------HAQCIISL 488
L L +V +++ L + E+L++ C + LA A+ +S
Sbjct: 356 ELHKLNAMVGFAE-ALVCRRRALLGYFGERLEEPCGNCDLCLAPPETFDATEEARKALSC 414
Query: 489 LQDIQDNNQRLTMLQLVDKMKIKLKE--------------IDSDLKREEIEQLVLQLI-- 532
+ + QR + ++D ++ E I + L E ++ QLI
Sbjct: 415 VYRV---GQRFGVGHVIDVLRGSRSERILALGHDRLSTYGIGASLAAEAWGSIIRQLIHR 471
Query: 533 -----------IDRVLVRIGPFSPGKKIIKLEISSVQKNTADNKKSTKRSLTSSALEF-- 579
+ ++ P G++ + L ++ +K+ +R ++ E
Sbjct: 472 GYLEQDLANYSVLKLTPAARPLLRGEESLVLAKPRLRMAAPKKEKAPRRPGAATPAERDE 531
Query: 580 ----ELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEEASSNHLEKI--IGKLK 633
EL LRK LA + P+ + S + +++ +P+T EE L ++ +G+ K
Sbjct: 532 ELFQELRALRKRLAD-DQQVPPYIIFSDATLAEMASLRPTTPEE-----LLRVNGVGERK 585
Query: 634 TGKYGSRILEVISKCG 649
G+YG+ LE I G
Sbjct: 586 LGRYGAPFLEAIRSHG 601
>gi|340786036|ref|YP_004751501.1| ATP-dependent DNA helicase [Collimonas fungivorans Ter331]
gi|340551303|gb|AEK60678.1| ATP-dependent DNA helicase [Collimonas fungivorans Ter331]
Length = 614
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 237/362 (65%), Gaps = 12/362 (3%)
Query: 76 DSRADDVRLNVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIAL 135
D +A + VFG P++R Q EI++ V +G D LV+M GGGKSLCYQ+PA+LR+G+ +
Sbjct: 14 DPQALHILQTVFGYPSFRGQQAEIVSHVANGGDALVLMPTGGGKSLCYQIPALLRDGVGV 73
Query: 136 VVSPLLSLIQDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKIS 195
VVSPL++L+QDQV LA +G+ A L ST + E+ I + + G+ L ++YV PE++
Sbjct: 74 VVSPLIALMQDQVDALAEVGVRAAFLNSTQTYEEASQIERRVRSGD--LDLVYVAPERL- 130
Query: 196 KSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTA 255
+ R + LE + +++L +IDEAHC SQWGHDFRP+Y L IL +FP VP +ALTA
Sbjct: 131 LTPRCLDLLE----SSKIALFAIDEAHCVSQWGHDFRPEYIKLSILHERFPQVPRIALTA 186
Query: 256 TATQKVQNDLMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNS 315
TA Q+ + ++ L + + +FVS+ +RPN+ Y + EK++ K ++D +IQ +
Sbjct: 187 TADQQTREEIALRLQLEQGARFVSSFDRPNIRYQIVEKANGRKQLLD----FIQSEHAG- 241
Query: 316 ESGIVYCFSRKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAF 375
++GIVYC SRK+ E+ A+ L Q+GI A YHA MD R + R+ + V+V T+AF
Sbjct: 242 DAGIVYCLSRKKVEETAEFLEQQGIQALPYHAGMDYAQRTRNQGRFLREDGIVMVATIAF 301
Query: 376 GMGINKPDVRFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYEN 435
GMGI+KPDVRFV H L KS+E YYQE+GRAGRDG P+ + + DV +Q M+
Sbjct: 302 GMGIDKPDVRFVAHLDLPKSIEGYYQETGRAGRDGGPANAWMAYGLQDVVQQRRMIDESE 361
Query: 436 SG 437
+G
Sbjct: 362 AG 363
>gi|195571657|ref|XP_002103819.1| GD20640 [Drosophila simulans]
gi|194199746|gb|EDX13322.1| GD20640 [Drosophila simulans]
Length = 1473
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 185/489 (37%), Positives = 270/489 (55%), Gaps = 70/489 (14%)
Query: 87 FGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLIQD 146
FG+ ++R NQ ++INA L G D V+M GGGKSLCYQLPA+L EG+ +V+SPL SLI D
Sbjct: 747 FGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 806
Query: 147 QVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKLEK 206
Q+ LA+L I A L+ D IY+ LE +K+LYVTPEKIS S RF L+
Sbjct: 807 QINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKISSSARFQDTLDT 866
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQNDLM 266
+ +S IDEAHC SQWGHDFRPDYK LG+LK +FP+VP +ALTATAT +V+ D++
Sbjct: 867 LNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPTIALTATATPRVRLDIL 926
Query: 267 EMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFSRK 326
L+++ C F+S+ NR NL Y V K V +D+I++YI+ S P SGI+YC SRK
Sbjct: 927 AQLNLKNCKWFLSSFNRSNLRYRVLPKKGVS--TLDDISRYIR-SKPAHFSGIIYCLSRK 983
Query: 327 ECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRF 386
EC++ ++++ + GI A YHA + + VRF
Sbjct: 984 ECDETSKKMCKDGIRAVSYHAGL-----------------------------TDTEHVRF 1014
Query: 387 VIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENS--------GL 438
V+H+SL KS+E YYQE+GRAGRDG ++C+L++ +D+ R M+ + + +
Sbjct: 1015 VLHYSLPKSIEGYYQEAGRAGRDGDMADCILYYNYSDMLRIKKMLDSDKALQYNVKKIHV 1074
Query: 439 QNLYDIVRYSQ-------------YPLHWNIEKV---RLVIFEKLQQVNLFCMVVLAGHA 482
NLY IV Y + + H+ E+ R + F V HA
Sbjct: 1075 DNLYRIVGYCENLTDCRRAQQLDYFGEHFTSEQCLENRETACDNCINKRAFKAVDALEHA 1134
Query: 483 QCIISLLQDIQDNNQRLTMLQLVDKMK-IKLKEIDS-------------DLKREEIEQLV 528
+ ++D+ R T+L + D +K K+K+I D ++ ++ +L+
Sbjct: 1135 RKAARAVKDLCSGRSRFTLLHIADVLKGSKIKKIIDFNHHKTPHHGALKDWEKNDVHRLL 1194
Query: 529 LQLIIDRVL 537
+++ID L
Sbjct: 1195 RKMVIDGFL 1203
>gi|388598278|ref|ZP_10156674.1| ATP-dependent DNA helicase RecQ [Vibrio campbellii DS40M4]
Length = 611
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 232/355 (65%), Gaps = 13/355 (3%)
Query: 85 NVFGIPAYRANQQEIINAVLSGRDVLVIMAAGGGKSLCYQLPAVLREGIALVVSPLLSLI 144
+VFG +R QQ +I+A + GRD LVI+ GGGKSLCYQ+PA++R GI LV+SPL+SL+
Sbjct: 22 DVFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLM 81
Query: 145 QDQVMCLAALGIPAHMLTSTTSKEDEKFIYKALEKGEGELKMLYVTPEKISKSKRFMSKL 204
+DQV L A G+ A + ST +E+ +Y + G +K++YV+PE++ + F+ +L
Sbjct: 82 KDQVDQLKANGVAAECINSTMPREELLSVYNRMYTGH--IKLVYVSPERVLM-RDFIERL 138
Query: 205 EKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPMMALTATATQKVQND 264
E LS+I++DEAHC SQWGHDFRP+Y LG LK QF VP MALTATA + D
Sbjct: 139 ENLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 194
Query: 265 LMEMLHIRKCIKFVSTINRPNLFYMVREKSSVGKVVIDEIAKYIQESYPNSESGIVYCFS 324
++E L + ++ + +RPN+ Y + EK + +I +Y++ N GI+YC S
Sbjct: 195 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKP----VSQIVRYLETQKGNC--GIIYCGS 248
Query: 325 RKECEQVAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDV 384
RK+ E V ++L I A YHA MD + R V + ++ +Q++V TVAFGMGINKP+V
Sbjct: 249 RKKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNV 308
Query: 385 RFVIHHSLSKSVETYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQ 439
RFV+H + +++E+YYQE+GRAGRDGLP+E ++ + PAD+ M+ ++ G Q
Sbjct: 309 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDDGPQ 363
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,763,763,558
Number of Sequences: 23463169
Number of extensions: 393999575
Number of successful extensions: 1508628
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 24389
Number of HSP's successfully gapped in prelim test: 6222
Number of HSP's that attempted gapping in prelim test: 1441501
Number of HSP's gapped (non-prelim): 48671
length of query: 692
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 542
effective length of database: 8,839,720,017
effective search space: 4791128249214
effective search space used: 4791128249214
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)