Query 035998
Match_columns 1020
No_of_seqs 952 out of 7085
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 08:27:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035998.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035998hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 8E-112 2E-116 1084.4 69.5 914 32-1019 27-951 (968)
2 PLN00113 leucine-rich repeat r 100.0 4.5E-59 9.7E-64 597.4 33.6 514 109-642 69-586 (968)
3 KOG1187 Serine/threonine prote 100.0 1.6E-48 3.6E-53 432.4 27.6 288 728-1019 61-352 (361)
4 KOG0581 Mitogen-activated prot 100.0 1E-44 2.2E-49 375.9 19.5 249 745-1014 82-334 (364)
5 KOG0197 Tyrosine kinases [Sign 100.0 3.3E-45 7.3E-50 398.0 13.5 253 744-1019 208-461 (468)
6 KOG0192 Tyrosine kinase specif 100.0 1.4E-43 2.9E-48 389.4 24.7 253 745-1019 44-303 (362)
7 KOG0595 Serine/threonine-prote 100.0 3.2E-43 6.9E-48 367.2 22.1 203 741-953 9-220 (429)
8 KOG1026 Nerve growth factor re 100.0 4.8E-44 1E-48 407.3 16.3 259 742-1019 486-762 (774)
9 KOG0615 Serine/threonine prote 100.0 4.1E-44 8.9E-49 372.6 12.4 254 741-1017 171-441 (475)
10 KOG0575 Polo-like serine/threo 100.0 3.4E-43 7.4E-48 385.2 19.1 247 742-1014 18-268 (592)
11 KOG0591 NIMA (never in mitosis 100.0 1.6E-43 3.5E-48 349.7 11.1 256 743-1015 20-281 (375)
12 KOG0598 Ribosomal protein S6 k 100.0 1.3E-42 2.9E-47 360.2 14.6 242 741-1007 24-269 (357)
13 KOG0593 Predicted protein kina 100.0 5.6E-42 1.2E-46 342.2 14.6 264 742-1014 2-283 (396)
14 KOG0472 Leucine-rich repeat pr 100.0 7.9E-45 1.7E-49 374.9 -9.7 483 104-639 40-540 (565)
15 KOG0592 3-phosphoinositide-dep 100.0 1E-40 2.3E-45 358.8 19.9 252 739-1014 70-337 (604)
16 KOG0661 MAPK related serine/th 100.0 9.5E-42 2.1E-46 361.1 9.9 261 741-1014 9-290 (538)
17 KOG0472 Leucine-rich repeat pr 100.0 3.4E-44 7.3E-49 370.3 -11.6 476 87-617 47-541 (565)
18 KOG0659 Cdk activating kinase 100.0 3.6E-40 7.7E-45 324.4 16.9 261 742-1014 2-280 (318)
19 KOG0582 Ste20-like serine/thre 100.0 2.5E-39 5.5E-44 340.1 22.3 262 741-1014 25-292 (516)
20 KOG0196 Tyrosine kinase, EPH ( 100.0 4.9E-41 1.1E-45 373.2 8.6 256 743-1020 630-892 (996)
21 KOG0600 Cdc2-related protein k 100.0 4.9E-40 1.1E-44 350.8 15.6 265 742-1014 117-399 (560)
22 KOG4194 Membrane glycoprotein 100.0 5.8E-41 1.3E-45 360.8 8.6 328 55-385 44-377 (873)
23 KOG0193 Serine/threonine prote 100.0 2.8E-40 6E-45 359.7 13.7 265 735-1020 385-654 (678)
24 KOG1095 Protein tyrosine kinas 100.0 3.1E-40 6.8E-45 390.2 15.1 260 742-1020 692-962 (1025)
25 KOG0616 cAMP-dependent protein 100.0 2.3E-39 5E-44 323.4 18.9 236 742-1007 44-284 (355)
26 KOG0578 p21-activated serine/t 100.0 7.3E-40 1.6E-44 356.2 16.5 250 741-1014 272-522 (550)
27 KOG0605 NDR and related serine 100.0 2.2E-39 4.7E-44 349.4 19.0 253 740-1014 139-444 (550)
28 KOG0198 MEKK and related serin 100.0 3.2E-39 6.9E-44 343.2 19.5 253 742-1014 17-275 (313)
29 KOG4194 Membrane glycoprotein 100.0 9E-41 2E-45 359.3 7.7 410 64-588 32-447 (873)
30 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.1E-38 4.5E-43 357.4 23.3 263 740-1020 5-335 (338)
31 KOG1094 Discoidin domain recep 100.0 1.1E-38 2.4E-43 343.5 17.9 264 742-1019 538-804 (807)
32 KOG0583 Serine/threonine prote 100.0 6.7E-38 1.4E-42 348.4 24.5 249 740-1014 15-274 (370)
33 KOG4721 Serine/threonine prote 100.0 4.7E-39 1E-43 344.5 13.1 248 730-1017 119-366 (904)
34 KOG0597 Serine-threonine prote 100.0 1.5E-38 3.2E-43 341.3 16.4 246 742-1014 2-250 (808)
35 KOG0194 Protein tyrosine kinas 100.0 4.6E-39 1E-43 356.7 12.5 259 737-1019 152-420 (474)
36 KOG2345 Serine/threonine prote 100.0 1.5E-38 3.2E-43 309.9 13.9 266 740-1020 19-301 (302)
37 KOG0611 Predicted serine/threo 100.0 3.3E-38 7.1E-43 325.4 16.0 246 741-1014 52-302 (668)
38 cd05096 PTKc_DDR1 Catalytic do 100.0 3.9E-37 8.4E-42 341.6 25.0 265 742-1018 5-304 (304)
39 cd05106 PTKc_CSF-1R Catalytic 100.0 3.2E-37 6.9E-42 350.9 23.4 263 740-1020 36-373 (374)
40 KOG0694 Serine/threonine prote 100.0 9.1E-38 2E-42 346.2 17.7 241 742-1009 368-613 (694)
41 KOG0201 Serine/threonine prote 100.0 2E-38 4.3E-43 333.7 11.6 248 742-1014 13-262 (467)
42 PHA02988 hypothetical protein; 100.0 4.6E-37 9.9E-42 336.5 22.4 258 730-1019 13-279 (283)
43 KOG0585 Ca2+/calmodulin-depend 100.0 1.9E-37 4.1E-42 327.8 18.1 252 741-1014 96-371 (576)
44 KOG0663 Protein kinase PITSLRE 100.0 1E-37 2.3E-42 316.0 15.2 264 742-1014 76-360 (419)
45 KOG4278 Protein tyrosine kinas 100.0 4.7E-38 1E-42 339.1 13.5 263 735-1020 260-524 (1157)
46 cd05104 PTKc_Kit Catalytic dom 100.0 4.9E-37 1.1E-41 349.7 22.5 262 741-1020 34-375 (375)
47 KOG0588 Serine/threonine prote 100.0 2.3E-37 5.1E-42 339.5 17.7 245 743-1014 13-262 (786)
48 KOG0660 Mitogen-activated prot 100.0 6.8E-38 1.5E-42 323.7 12.7 264 739-1014 19-309 (359)
49 KOG0580 Serine/threonine prote 100.0 7.2E-38 1.6E-42 303.9 11.4 247 742-1014 22-272 (281)
50 cd05631 STKc_GRK4 Catalytic do 100.0 1.4E-36 3.1E-41 333.5 22.5 250 744-1014 2-260 (285)
51 cd05064 PTKc_EphR_A10 Catalyti 100.0 9.7E-37 2.1E-41 331.4 20.4 256 742-1020 5-266 (266)
52 KOG0589 Serine/threonine prote 100.0 1.4E-37 3E-42 338.0 13.2 251 742-1015 4-258 (426)
53 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.1E-36 2.4E-41 334.9 20.4 264 742-1014 5-284 (288)
54 cd05093 PTKc_TrkB Catalytic do 100.0 1.7E-36 3.7E-41 333.6 21.7 259 742-1019 5-279 (288)
55 cd05048 PTKc_Ror Catalytic Dom 100.0 1.8E-36 3.8E-41 332.9 21.6 259 742-1019 5-283 (283)
56 cd05049 PTKc_Trk Catalytic dom 100.0 1.3E-36 2.8E-41 333.4 20.5 258 742-1018 5-280 (280)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 3.9E-36 8.4E-41 337.3 24.6 199 741-949 4-204 (331)
58 KOG4257 Focal adhesion tyrosin 100.0 3.8E-37 8.1E-42 333.2 15.5 255 741-1019 388-649 (974)
59 KOG3653 Transforming growth fa 100.0 3.3E-36 7.1E-41 318.9 21.7 263 744-1019 212-503 (534)
60 KOG0658 Glycogen synthase kina 100.0 1E-37 2.2E-42 323.0 9.9 259 743-1014 25-305 (364)
61 PTZ00267 NIMA-related protein 100.0 1.7E-36 3.6E-41 355.7 21.5 253 743-1014 68-322 (478)
62 cd05612 STKc_PRKX_like Catalyt 100.0 2.7E-36 5.8E-41 332.3 21.5 244 742-1014 1-253 (291)
63 PF07714 Pkinase_Tyr: Protein 100.0 4.5E-37 9.8E-42 332.3 14.9 250 746-1016 3-259 (259)
64 KOG0594 Protein kinase PCTAIRE 100.0 1E-36 2.2E-41 317.1 16.7 265 742-1015 11-302 (323)
65 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.5E-36 5.4E-41 326.4 20.4 252 742-1017 4-256 (256)
66 cd05033 PTKc_EphR Catalytic do 100.0 4.6E-36 1E-40 326.3 22.3 257 742-1020 4-266 (266)
67 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.6E-36 3.5E-41 329.0 18.7 257 740-1019 4-261 (261)
68 cd05094 PTKc_TrkC Catalytic do 100.0 3.2E-36 6.9E-41 332.1 21.0 259 742-1019 5-282 (291)
69 KOG1989 ARK protein kinase fam 100.0 2.1E-36 4.6E-41 347.2 20.2 257 741-1019 36-311 (738)
70 cd05072 PTKc_Lyn Catalytic dom 100.0 3.3E-36 7.2E-41 326.5 20.4 256 741-1019 5-261 (261)
71 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.9E-36 8.5E-41 342.8 21.7 263 740-1020 35-398 (400)
72 KOG0033 Ca2+/calmodulin-depend 100.0 2E-38 4.3E-43 307.2 2.3 251 741-1014 10-266 (355)
73 cd07848 STKc_CDKL5 Catalytic d 100.0 3.9E-36 8.5E-41 330.8 20.8 265 742-1014 1-283 (287)
74 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.7E-36 3.7E-41 340.7 18.2 252 742-1014 1-256 (333)
75 cd05068 PTKc_Frk_like Catalyti 100.0 6.3E-36 1.4E-40 324.3 21.5 256 741-1019 5-261 (261)
76 KOG0610 Putative serine/threon 100.0 4.4E-36 9.5E-41 313.5 19.3 252 743-1014 78-391 (459)
77 cd05062 PTKc_IGF-1R Catalytic 100.0 3.8E-36 8.3E-41 329.0 19.8 260 740-1018 4-277 (277)
78 PTZ00263 protein kinase A cata 100.0 4.5E-36 9.7E-41 336.3 20.6 244 742-1014 18-270 (329)
79 cd05108 PTKc_EGFR Catalytic do 100.0 5.6E-36 1.2E-40 334.1 20.8 255 742-1019 7-268 (316)
80 cd05054 PTKc_VEGFR Catalytic d 100.0 5.9E-36 1.3E-40 335.9 21.1 263 740-1020 5-334 (337)
81 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.7E-35 3.6E-40 328.3 24.4 263 741-1014 4-287 (303)
82 cd05571 STKc_PKB Catalytic dom 100.0 8E-36 1.7E-40 333.5 21.8 241 748-1014 1-250 (323)
83 cd05053 PTKc_FGFR Catalytic do 100.0 4.2E-36 9.1E-41 331.7 19.1 262 740-1020 10-292 (293)
84 cd06650 PKc_MEK1 Catalytic dom 100.0 2E-35 4.2E-40 331.5 24.6 200 741-950 4-205 (333)
85 PTZ00283 serine/threonine prot 100.0 5E-36 1.1E-40 351.4 20.2 256 740-1014 30-296 (496)
86 cd05052 PTKc_Abl Catalytic dom 100.0 1.1E-35 2.5E-40 322.6 21.5 256 742-1020 6-263 (263)
87 cd08228 STKc_Nek6 Catalytic do 100.0 4.5E-35 9.8E-40 318.7 26.1 260 742-1019 2-265 (267)
88 cd05075 PTKc_Axl Catalytic dom 100.0 1.7E-35 3.7E-40 323.0 22.7 258 744-1020 1-272 (272)
89 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.8E-36 1.7E-40 322.4 19.6 252 742-1017 4-256 (256)
90 PTZ00426 cAMP-dependent protei 100.0 8.5E-36 1.8E-40 334.5 20.4 244 742-1014 30-283 (340)
91 KOG0444 Cytoskeletal regulator 100.0 8.5E-39 1.8E-43 345.3 -3.9 371 86-623 8-381 (1255)
92 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-35 3E-40 326.9 21.5 259 743-1020 1-287 (290)
93 cd05090 PTKc_Ror1 Catalytic do 100.0 1.4E-35 3.1E-40 325.6 21.5 258 742-1018 5-282 (283)
94 KOG2052 Activin A type IB rece 100.0 7.3E-36 1.6E-40 313.9 18.1 266 738-1019 207-503 (513)
95 cd05035 PTKc_Axl_like Catalyti 100.0 1.8E-35 3.9E-40 323.1 22.1 258 744-1020 1-273 (273)
96 cd05084 PTKc_Fes Catalytic dom 100.0 1.4E-35 3E-40 319.7 20.8 249 748-1018 1-252 (252)
97 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.5E-36 1.4E-40 337.4 18.8 264 743-1014 1-289 (338)
98 cd07862 STKc_CDK6 Catalytic do 100.0 1.3E-35 2.9E-40 327.2 20.4 261 742-1014 1-286 (290)
99 cd05111 PTK_HER3 Pseudokinase 100.0 2.1E-35 4.5E-40 323.3 21.6 255 742-1019 7-268 (279)
100 cd05595 STKc_PKB_beta Catalyti 100.0 2.9E-35 6.2E-40 328.8 23.1 241 748-1014 1-250 (323)
101 cd05043 PTK_Ryk Pseudokinase d 100.0 1.4E-35 3E-40 325.2 20.1 261 740-1019 4-276 (280)
102 PLN00034 mitogen-activated pro 100.0 2E-35 4.3E-40 334.7 21.8 246 743-1014 75-327 (353)
103 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.2E-35 4.8E-40 324.1 21.6 267 744-1019 6-281 (283)
104 cd05059 PTKc_Tec_like Catalyti 100.0 1.7E-35 3.6E-40 319.9 20.1 252 742-1017 4-256 (256)
105 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.9E-35 4.2E-40 328.0 20.9 261 741-1020 14-297 (304)
106 cd05092 PTKc_TrkA Catalytic do 100.0 2.1E-35 4.5E-40 323.6 20.8 258 742-1018 5-280 (280)
107 cd05097 PTKc_DDR_like Catalyti 100.0 4.7E-35 1E-39 323.4 23.8 266 741-1018 4-295 (295)
108 PHA03212 serine/threonine kina 100.0 4.9E-35 1.1E-39 333.8 24.6 259 741-1014 91-375 (391)
109 cd05585 STKc_YPK1_like Catalyt 100.0 2E-35 4.4E-40 328.7 20.7 239 750-1014 1-246 (312)
110 cd05605 STKc_GRK4_like Catalyt 100.0 2.8E-35 6.2E-40 323.2 21.7 251 743-1014 1-260 (285)
111 KOG1025 Epidermal growth facto 100.0 1.5E-36 3.3E-41 338.3 11.3 252 745-1019 699-957 (1177)
112 cd05095 PTKc_DDR2 Catalytic do 100.0 6.9E-35 1.5E-39 322.3 24.5 266 741-1018 4-296 (296)
113 cd05032 PTKc_InsR_like Catalyt 100.0 1.6E-35 3.6E-40 324.1 19.3 259 741-1018 5-277 (277)
114 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.6E-35 5.6E-40 322.4 20.7 259 741-1018 5-277 (277)
115 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.1E-35 4.5E-40 328.2 20.2 260 742-1020 18-300 (307)
116 cd05051 PTKc_DDR Catalytic dom 100.0 6.5E-35 1.4E-39 322.7 23.9 266 741-1018 4-296 (296)
117 cd05091 PTKc_Ror2 Catalytic do 100.0 1.5E-35 3.2E-40 325.5 18.7 257 743-1018 6-282 (283)
118 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.5E-35 7.5E-40 334.8 22.1 263 740-1020 35-400 (401)
119 PTZ00036 glycogen synthase kin 100.0 1.9E-35 4.2E-40 342.6 20.4 261 740-1014 64-350 (440)
120 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-35 3E-40 332.0 18.5 241 748-1014 1-250 (328)
121 cd05614 STKc_MSK2_N N-terminal 100.0 3E-35 6.5E-40 330.7 21.2 251 743-1014 1-266 (332)
122 cd05061 PTKc_InsR Catalytic do 100.0 2.7E-35 5.8E-40 324.2 20.4 261 740-1019 4-278 (288)
123 cd05050 PTKc_Musk Catalytic do 100.0 2.9E-35 6.2E-40 324.1 20.3 259 741-1018 4-288 (288)
124 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 9E-35 1.9E-39 316.4 23.9 260 742-1019 2-265 (267)
125 cd05071 PTKc_Src Catalytic dom 100.0 4E-35 8.6E-40 318.0 20.9 255 741-1019 5-260 (262)
126 cd08229 STKc_Nek7 Catalytic do 100.0 7E-35 1.5E-39 317.2 22.9 260 742-1019 2-265 (267)
127 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.3E-35 9.2E-40 317.6 21.1 253 742-1018 6-259 (260)
128 cd05584 STKc_p70S6K Catalytic 100.0 6.6E-35 1.4E-39 326.1 23.1 241 748-1014 2-255 (323)
129 cd05055 PTKc_PDGFR Catalytic d 100.0 6.6E-35 1.4E-39 323.0 22.8 260 741-1020 34-302 (302)
130 cd05608 STKc_GRK1 Catalytic do 100.0 5.1E-35 1.1E-39 320.3 21.5 247 750-1014 1-256 (280)
131 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.1E-35 8.9E-40 317.7 20.4 255 741-1019 5-260 (260)
132 cd05089 PTKc_Tie1 Catalytic do 100.0 5E-35 1.1E-39 323.5 21.2 256 742-1019 2-275 (297)
133 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.3E-35 9.4E-40 322.0 20.6 263 742-1019 4-283 (284)
134 KOG0032 Ca2+/calmodulin-depend 100.0 3.8E-35 8.3E-40 325.6 20.1 250 741-1014 34-292 (382)
135 cd05628 STKc_NDR1 Catalytic do 100.0 3.7E-35 7.9E-40 333.7 20.3 202 742-950 1-239 (363)
136 cd05109 PTKc_HER2 Catalytic do 100.0 5.9E-35 1.3E-39 319.9 21.3 255 742-1019 7-268 (279)
137 cd05626 STKc_LATS2 Catalytic d 100.0 2.8E-35 6E-40 336.8 19.4 252 743-1014 2-304 (381)
138 cd05607 STKc_GRK7 Catalytic do 100.0 9.4E-35 2E-39 317.7 22.7 245 750-1014 1-249 (277)
139 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.7E-35 1.4E-39 317.6 21.4 257 742-1020 5-268 (268)
140 cd05116 PTKc_Syk Catalytic dom 100.0 7.2E-35 1.6E-39 315.1 21.4 247 749-1019 2-255 (257)
141 cd05588 STKc_aPKC Catalytic do 100.0 1E-34 2.2E-39 325.3 22.9 248 748-1014 1-261 (329)
142 cd05088 PTKc_Tie2 Catalytic do 100.0 4.4E-35 9.5E-40 324.7 19.6 256 742-1019 7-280 (303)
143 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.4E-35 5.2E-40 334.4 17.9 252 742-1014 1-284 (350)
144 cd05618 STKc_aPKC_iota Catalyt 100.0 8.8E-35 1.9E-39 325.6 22.1 243 748-1009 1-250 (329)
145 cd05066 PTKc_EphR_A Catalytic 100.0 8.8E-35 1.9E-39 316.4 21.4 257 742-1020 4-267 (267)
146 cd06646 STKc_MAP4K5 Catalytic 100.0 5.7E-35 1.2E-39 317.9 19.8 254 741-1015 8-265 (267)
147 cd05599 STKc_NDR_like Catalyti 100.0 6.6E-35 1.4E-39 332.4 21.2 252 742-1014 1-295 (364)
148 KOG0199 ACK and related non-re 100.0 4.8E-36 1E-40 328.8 11.2 248 745-1014 113-367 (1039)
149 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.6E-35 1.4E-39 325.1 20.7 260 741-1019 11-293 (314)
150 cd05589 STKc_PKN Catalytic dom 100.0 2.9E-35 6.4E-40 329.3 17.9 244 744-1014 1-256 (324)
151 cd05034 PTKc_Src_like Catalyti 100.0 7.4E-35 1.6E-39 315.9 20.5 256 740-1018 4-260 (261)
152 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-34 2.5E-39 313.3 22.0 251 741-1019 5-256 (256)
153 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.9E-34 4.2E-39 325.0 24.5 262 741-1020 6-340 (343)
154 KOG0599 Phosphorylase kinase g 100.0 1.7E-35 3.6E-40 291.1 13.6 250 742-1014 17-282 (411)
155 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-35 3.3E-40 332.8 15.1 252 742-1014 1-262 (330)
156 cd06619 PKc_MKK5 Catalytic dom 100.0 3E-34 6.5E-39 314.2 25.0 249 742-1014 1-252 (279)
157 cd05065 PTKc_EphR_B Catalytic 100.0 8.4E-35 1.8E-39 317.0 20.5 256 743-1020 5-269 (269)
158 PRK13184 pknD serine/threonine 100.0 1.2E-34 2.5E-39 346.5 23.3 261 742-1019 2-290 (932)
159 cd05594 STKc_PKB_alpha Catalyt 100.0 1.9E-35 4.2E-40 330.9 15.5 241 748-1014 1-251 (325)
160 cd05587 STKc_cPKC Catalytic do 100.0 1.7E-34 3.7E-39 323.1 22.9 241 743-1009 1-246 (324)
161 cd05115 PTKc_Zap-70 Catalytic 100.0 1.4E-34 3E-39 312.7 21.4 247 750-1019 3-255 (257)
162 cd05590 STKc_nPKC_eta Catalyti 100.0 3.6E-35 7.8E-40 327.6 17.4 236 748-1009 1-241 (320)
163 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2E-34 4.3E-39 314.0 22.8 255 748-1017 1-268 (269)
164 cd05592 STKc_nPKC_theta_delta 100.0 2.3E-34 5E-39 320.5 23.5 240 748-1013 1-246 (316)
165 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-34 3.1E-39 315.2 21.4 251 748-1020 1-269 (270)
166 cd05069 PTKc_Yes Catalytic dom 100.0 1.5E-34 3.3E-39 313.1 21.5 253 742-1018 6-259 (260)
167 cd05085 PTKc_Fer Catalytic dom 100.0 1.9E-34 4.2E-39 310.4 22.1 247 748-1017 1-249 (250)
168 cd00192 PTKc Catalytic domain 100.0 1.5E-34 3.3E-39 313.5 21.3 251 748-1017 1-262 (262)
169 cd05619 STKc_nPKC_theta Cataly 100.0 7.2E-35 1.6E-39 324.4 19.2 241 748-1014 1-247 (316)
170 cd05629 STKc_NDR_like_fungal C 100.0 3.6E-35 7.8E-40 335.7 17.2 252 742-1014 1-304 (377)
171 cd07853 STKc_NLK Catalytic dom 100.0 1.7E-34 3.8E-39 329.5 22.6 263 743-1014 1-287 (372)
172 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9.2E-35 2E-39 323.3 19.8 264 742-1014 6-285 (309)
173 cd05596 STKc_ROCK Catalytic do 100.0 1.1E-34 2.4E-39 329.8 20.7 253 740-1014 41-303 (370)
174 cd05625 STKc_LATS1 Catalytic d 100.0 4E-35 8.7E-40 336.0 17.2 251 743-1014 2-304 (382)
175 cd05591 STKc_nPKC_epsilon Cata 100.0 1.6E-34 3.5E-39 322.8 21.6 241 748-1014 1-253 (321)
176 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.9E-34 4.1E-39 322.9 21.9 243 748-1009 1-248 (327)
177 KOG0574 STE20-like serine/thre 100.0 7.8E-37 1.7E-41 303.8 2.1 247 744-1014 35-282 (502)
178 PHA03207 serine/threonine kina 100.0 2E-34 4.2E-39 330.7 22.3 261 741-1014 91-374 (392)
179 cd05082 PTKc_Csk Catalytic dom 100.0 1.6E-34 3.5E-39 312.2 20.4 249 742-1019 6-256 (256)
180 cd06625 STKc_MEKK3_like Cataly 100.0 6.1E-34 1.3E-38 309.1 25.0 252 742-1015 2-260 (263)
181 cd05598 STKc_LATS Catalytic do 100.0 3.1E-35 6.7E-40 336.3 15.6 252 742-1014 1-300 (376)
182 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.4E-34 1.4E-38 312.6 25.4 263 742-1020 4-284 (284)
183 cd05060 PTKc_Syk_like Catalyti 100.0 2.6E-34 5.7E-39 310.8 21.9 248 748-1019 1-255 (257)
184 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.2E-34 2.6E-39 325.9 20.0 259 742-1019 12-293 (334)
185 cd05616 STKc_cPKC_beta Catalyt 100.0 6.9E-35 1.5E-39 326.1 17.8 241 743-1009 1-246 (323)
186 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-34 3.4E-39 328.0 20.9 255 738-1014 39-303 (370)
187 cd05041 PTKc_Fes_like Catalyti 100.0 2.6E-34 5.6E-39 309.7 21.4 249 748-1018 1-251 (251)
188 cd05620 STKc_nPKC_delta Cataly 100.0 8.3E-35 1.8E-39 324.1 18.1 240 748-1013 1-246 (316)
189 cd06615 PKc_MEK Catalytic doma 100.0 4.1E-34 8.8E-39 317.7 23.5 257 742-1014 1-286 (308)
190 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.9E-34 1.3E-38 308.7 24.1 240 748-1017 1-262 (262)
191 cd05570 STKc_PKC Catalytic dom 100.0 3.3E-34 7.1E-39 319.7 22.5 241 748-1014 1-251 (318)
192 cd06654 STKc_PAK1 Catalytic do 100.0 3.7E-34 8E-39 316.1 22.6 250 741-1014 19-269 (296)
193 cd05630 STKc_GRK6 Catalytic do 100.0 4E-34 8.6E-39 314.0 22.7 251 743-1014 1-260 (285)
194 cd05582 STKc_RSK_N N-terminal 100.0 7.2E-35 1.6E-39 325.4 17.0 238 748-1011 2-245 (318)
195 PF00069 Pkinase: Protein kina 100.0 2.1E-34 4.5E-39 312.1 20.1 252 744-1014 1-256 (260)
196 cd05056 PTKc_FAK Catalytic dom 100.0 3E-34 6.5E-39 312.8 21.4 255 741-1019 5-265 (270)
197 cd05073 PTKc_Hck Catalytic dom 100.0 2.4E-34 5.3E-39 311.6 20.5 255 741-1019 5-260 (260)
198 KOG4717 Serine/threonine prote 100.0 5.2E-35 1.1E-39 310.0 14.5 249 743-1017 19-274 (864)
199 cd08529 STKc_FA2-like Catalyti 100.0 8.5E-34 1.9E-38 306.6 24.5 249 743-1014 1-252 (256)
200 cd05112 PTKc_Itk Catalytic dom 100.0 2.4E-34 5.3E-39 310.9 20.2 252 742-1017 4-256 (256)
201 cd08219 STKc_Nek3 Catalytic do 100.0 2E-34 4.2E-39 311.4 19.3 250 743-1015 1-252 (255)
202 cd05057 PTKc_EGFR_like Catalyt 100.0 3.4E-34 7.3E-39 314.0 21.3 255 742-1019 7-268 (279)
203 cd05622 STKc_ROCK1 Catalytic d 100.0 3E-34 6.5E-39 326.1 21.5 259 734-1014 35-303 (371)
204 cd05632 STKc_GRK5 Catalytic do 100.0 4.9E-34 1.1E-38 313.4 22.5 250 744-1014 2-260 (285)
205 cd05044 PTKc_c-ros Catalytic d 100.0 1.7E-34 3.7E-39 314.6 18.5 252 748-1018 1-269 (269)
206 cd06638 STKc_myosinIIIA Cataly 100.0 3.8E-34 8.2E-39 314.9 21.3 264 732-1015 8-283 (286)
207 cd07863 STKc_CDK4 Catalytic do 100.0 2.4E-34 5.2E-39 316.8 19.7 260 743-1014 1-284 (288)
208 PTZ00266 NIMA-related protein 100.0 4.3E-34 9.4E-39 342.7 23.3 256 740-1014 11-294 (1021)
209 PHA03211 serine/threonine kina 100.0 8.8E-34 1.9E-38 326.8 25.0 261 741-1014 168-454 (461)
210 cd05040 PTKc_Ack_like Catalyti 100.0 9.1E-34 2E-38 306.6 23.6 250 748-1018 1-257 (257)
211 cd05575 STKc_SGK Catalytic dom 100.0 8.3E-35 1.8E-39 325.5 16.0 237 748-1010 1-242 (323)
212 KOG1024 Receptor-like protein 100.0 3.5E-35 7.6E-40 302.5 11.5 268 733-1019 275-555 (563)
213 cd07876 STKc_JNK2 Catalytic do 100.0 7.2E-34 1.6E-38 322.9 23.5 261 741-1014 20-314 (359)
214 PHA03209 serine/threonine kina 100.0 7.1E-34 1.5E-38 321.9 23.2 192 740-947 64-256 (357)
215 cd05058 PTKc_Met_Ron Catalytic 100.0 4.6E-34 1E-38 309.9 20.5 251 748-1020 1-260 (262)
216 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.3E-34 9.4E-39 311.8 20.3 239 749-1017 2-274 (274)
217 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.1E-34 6.7E-39 315.2 19.2 262 742-1019 4-283 (284)
218 cd05602 STKc_SGK1 Catalytic do 100.0 1.3E-34 2.8E-39 324.2 16.3 241 748-1014 1-246 (325)
219 KOG0596 Dual specificity; seri 100.0 1.9E-34 4.2E-39 310.1 16.8 253 741-1014 360-626 (677)
220 cd05615 STKc_cPKC_alpha Cataly 100.0 2.5E-34 5.4E-39 321.3 18.5 241 743-1009 1-246 (323)
221 KOG4279 Serine/threonine prote 100.0 7.6E-35 1.6E-39 318.3 13.6 247 748-1014 581-831 (1226)
222 cd05042 PTKc_Aatyk Catalytic d 100.0 8.7E-34 1.9E-38 309.0 22.1 255 748-1017 1-268 (269)
223 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.2E-34 9.1E-39 316.8 19.8 261 742-1014 6-285 (301)
224 KOG0667 Dual-specificity tyros 100.0 1.2E-34 2.6E-39 322.2 15.4 198 743-952 187-393 (586)
225 cd05110 PTKc_HER4 Catalytic do 100.0 4.1E-34 8.9E-39 317.0 19.8 255 742-1019 7-268 (303)
226 cd06645 STKc_MAP4K3 Catalytic 100.0 4.8E-34 1E-38 310.7 19.7 252 742-1014 9-264 (267)
227 cd06656 STKc_PAK3 Catalytic do 100.0 1.1E-33 2.4E-38 312.4 23.0 250 741-1014 18-268 (297)
228 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.1E-33 4.6E-38 305.6 24.8 254 749-1017 2-267 (268)
229 cd06631 STKc_YSK4 Catalytic do 100.0 2E-33 4.3E-38 305.4 24.3 250 743-1014 1-261 (265)
230 cd06612 STKc_MST1_2 Catalytic 100.0 1E-33 2.2E-38 306.0 21.8 250 741-1014 2-252 (256)
231 cd06613 STKc_MAP4K3_like Catal 100.0 7.3E-34 1.6E-38 308.3 20.8 254 741-1014 2-259 (262)
232 cd05604 STKc_SGK3 Catalytic do 100.0 1.3E-34 2.9E-39 324.1 15.3 238 748-1011 1-243 (325)
233 PTZ00284 protein kinase; Provi 100.0 5.9E-34 1.3E-38 334.4 21.4 263 738-1014 125-437 (467)
234 cd05597 STKc_DMPK_like Catalyt 100.0 5.4E-34 1.2E-38 319.7 19.9 254 742-1014 1-265 (331)
235 cd06655 STKc_PAK2 Catalytic do 100.0 9.9E-34 2.1E-38 312.6 21.7 250 741-1014 18-268 (296)
236 cd06624 STKc_ASK Catalytic dom 100.0 2.6E-33 5.6E-38 305.1 24.6 257 738-1014 4-264 (268)
237 cd06628 STKc_MAPKKK_Byr2_like 100.0 1E-33 2.2E-38 308.0 21.5 249 743-1014 1-263 (267)
238 cd06644 STKc_STK10_LOK Catalyt 100.0 1.7E-33 3.6E-38 310.7 23.4 252 741-1014 11-268 (292)
239 cd05627 STKc_NDR2 Catalytic do 100.0 1.7E-34 3.6E-39 328.1 15.7 252 742-1014 1-292 (360)
240 cd05046 PTK_CCK4 Pseudokinase 100.0 1.9E-33 4.2E-38 307.4 23.6 258 742-1018 5-275 (275)
241 cd07874 STKc_JNK3 Catalytic do 100.0 4.1E-34 8.9E-39 324.5 18.9 260 740-1014 15-310 (355)
242 cd07868 STKc_CDK8 Catalytic do 100.0 1E-33 2.2E-38 316.3 21.8 198 747-950 6-219 (317)
243 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.6E-33 3.4E-38 310.0 22.6 253 742-1014 1-261 (286)
244 cd05074 PTKc_Tyro3 Catalytic d 100.0 9.5E-34 2.1E-38 309.4 20.7 257 744-1019 1-272 (273)
245 cd07861 STKc_CDK1_euk Catalyti 100.0 1.3E-33 2.8E-38 310.4 21.9 262 743-1014 1-281 (285)
246 cd06643 STKc_SLK Catalytic dom 100.0 3.3E-33 7.1E-38 306.7 24.9 249 744-1014 7-261 (282)
247 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 8.3E-34 1.8E-38 307.0 19.8 240 748-1017 1-258 (258)
248 cd06639 STKc_myosinIIIB Cataly 100.0 1.5E-33 3.3E-38 310.8 21.9 263 732-1014 12-286 (291)
249 KOG0444 Cytoskeletal regulator 100.0 6.4E-37 1.4E-41 330.8 -4.8 367 183-644 9-380 (1255)
250 cd05603 STKc_SGK2 Catalytic do 100.0 1.3E-33 2.7E-38 315.8 21.4 237 748-1010 1-242 (321)
251 cd08221 STKc_Nek9 Catalytic do 100.0 1.6E-33 3.4E-38 304.5 21.5 250 743-1015 1-253 (256)
252 cd06637 STKc_TNIK Catalytic do 100.0 7.7E-34 1.7E-38 310.0 19.1 253 739-1014 3-268 (272)
253 cd08227 PK_STRAD_alpha Pseudok 100.0 1.3E-33 2.9E-38 316.5 21.4 262 746-1014 2-306 (327)
254 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.3E-33 2.7E-38 305.8 20.5 238 748-1017 1-259 (259)
255 cd06632 STKc_MEKK1_plant Catal 100.0 3.7E-33 7.9E-38 302.0 24.1 247 743-1014 1-254 (258)
256 cd08528 STKc_Nek10 Catalytic d 100.0 1.8E-33 4E-38 306.5 21.8 255 743-1018 1-269 (269)
257 cd07875 STKc_JNK1 Catalytic do 100.0 1.6E-33 3.6E-38 320.6 22.3 261 741-1014 23-317 (364)
258 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.8E-33 3.9E-38 309.0 21.9 255 742-1015 5-266 (284)
259 cd06611 STKc_SLK_like Catalyti 100.0 2.3E-33 5E-38 307.6 22.4 252 741-1014 4-261 (280)
260 cd06630 STKc_MEKK1 Catalytic d 100.0 3.1E-33 6.7E-38 304.5 23.2 253 743-1014 1-263 (268)
261 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-33 3.3E-38 308.0 20.7 248 742-1014 1-250 (274)
262 KOG0584 Serine/threonine prote 100.0 1.4E-34 3.1E-39 317.9 12.4 241 746-1014 44-295 (632)
263 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.6E-33 1.4E-37 305.0 25.6 261 742-1014 1-265 (287)
264 cd05083 PTKc_Chk Catalytic dom 100.0 1.1E-33 2.4E-38 305.2 19.0 247 742-1018 6-253 (254)
265 smart00219 TyrKc Tyrosine kina 100.0 1.7E-33 3.8E-38 304.5 20.5 251 744-1016 1-258 (258)
266 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.3E-33 5.1E-38 308.6 21.4 264 742-1014 1-282 (286)
267 cd08223 STKc_Nek4 Catalytic do 100.0 2.8E-33 6E-38 302.8 21.4 249 743-1014 1-253 (257)
268 KOG0618 Serine/threonine phosp 100.0 2.6E-36 5.6E-41 342.7 -2.6 463 87-614 47-510 (1081)
269 cd07878 STKc_p38beta_MAPK11 Ca 100.0 9.3E-34 2E-38 320.1 17.8 258 739-1014 12-297 (343)
270 cd06640 STKc_MST4 Catalytic do 100.0 5.9E-33 1.3E-37 303.7 23.6 247 742-1014 4-252 (277)
271 cd06608 STKc_myosinIII_like Ca 100.0 2.6E-33 5.5E-38 306.3 20.6 256 739-1014 3-271 (275)
272 KOG4250 TANK binding protein k 100.0 5E-34 1.1E-38 317.3 14.8 269 744-1019 15-310 (732)
273 cd05623 STKc_MRCK_alpha Cataly 100.0 1.2E-33 2.5E-38 317.3 18.1 254 742-1014 1-265 (332)
274 KOG0577 Serine/threonine prote 100.0 2.5E-34 5.4E-39 309.6 11.9 243 744-1014 28-277 (948)
275 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-33 2.3E-38 317.4 17.6 254 742-1014 1-265 (331)
276 cd07867 STKc_CDC2L6 Catalytic 100.0 4.2E-33 9E-38 311.5 22.4 198 747-950 6-219 (317)
277 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.8E-33 3.9E-38 309.5 19.1 261 742-1014 1-282 (286)
278 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.5E-33 1.2E-37 303.2 22.7 254 743-1014 2-268 (272)
279 cd08217 STKc_Nek2 Catalytic do 100.0 9.6E-33 2.1E-37 299.9 24.4 251 743-1014 1-261 (265)
280 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.6E-33 3.4E-38 308.3 18.3 246 743-1014 5-252 (277)
281 cd07832 STKc_CCRK Catalytic do 100.0 3.4E-33 7.5E-38 307.3 20.8 261 743-1014 1-281 (286)
282 cd06623 PKc_MAPKK_plant_like C 100.0 1E-32 2.2E-37 299.7 24.2 251 742-1014 1-255 (264)
283 cd06651 STKc_MEKK3 Catalytic d 100.0 9.9E-33 2.1E-37 300.1 23.9 250 742-1014 2-260 (266)
284 cd06605 PKc_MAPKK Catalytic do 100.0 3.9E-33 8.4E-38 303.2 20.6 253 742-1014 1-256 (265)
285 cd07839 STKc_CDK5 Catalytic do 100.0 3.2E-33 6.9E-38 307.2 20.1 261 743-1014 1-280 (284)
286 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.7E-33 1.7E-37 304.0 23.1 253 742-1014 1-260 (283)
287 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.5E-33 7.6E-38 306.5 20.3 260 732-1014 6-278 (282)
288 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.7E-33 1.9E-37 300.7 23.1 258 742-1014 1-263 (267)
289 cd08220 STKc_Nek8 Catalytic do 100.0 5.3E-33 1.2E-37 300.4 21.2 248 743-1014 1-252 (256)
290 cd06658 STKc_PAK5 Catalytic do 100.0 3.5E-33 7.6E-38 307.5 20.0 247 744-1014 24-271 (292)
291 cd08218 STKc_Nek1 Catalytic do 100.0 3.9E-33 8.4E-38 301.5 19.7 249 743-1014 1-252 (256)
292 cd05586 STKc_Sck1_like Catalyt 100.0 5.7E-34 1.2E-38 319.8 13.5 240 750-1014 1-252 (330)
293 cd06659 STKc_PAK6 Catalytic do 100.0 7.5E-33 1.6E-37 305.7 22.2 247 744-1014 23-270 (297)
294 cd07844 STKc_PCTAIRE_like Cata 100.0 6.8E-33 1.5E-37 305.7 21.6 262 742-1014 5-287 (291)
295 cd05580 STKc_PKA Catalytic dom 100.0 1.5E-32 3.4E-37 302.5 24.0 244 742-1014 1-253 (290)
296 cd07833 STKc_CDKL Catalytic do 100.0 4.2E-33 9E-38 306.9 19.2 262 742-1014 1-284 (288)
297 cd05609 STKc_MAST Catalytic do 100.0 7.8E-33 1.7E-37 307.2 21.4 255 742-1017 1-272 (305)
298 cd06647 STKc_PAK_I Catalytic d 100.0 1.1E-32 2.5E-37 303.8 22.4 249 742-1014 19-268 (293)
299 KOG0986 G protein-coupled rece 100.0 8.1E-34 1.8E-38 298.1 12.4 247 741-1008 184-434 (591)
300 cd07841 STKc_CDK7 Catalytic do 100.0 7.8E-33 1.7E-37 306.4 21.0 260 743-1014 1-281 (298)
301 cd06626 STKc_MEKK4 Catalytic d 100.0 2.5E-32 5.3E-37 296.7 24.5 252 743-1014 1-260 (264)
302 cd06652 STKc_MEKK2 Catalytic d 100.0 1.3E-32 2.9E-37 298.9 22.4 250 742-1014 2-260 (265)
303 KOG0690 Serine/threonine prote 100.0 6.8E-34 1.5E-38 286.0 10.8 247 742-1014 168-423 (516)
304 KOG0618 Serine/threonine phosp 100.0 1.1E-35 2.4E-40 337.5 -2.4 463 101-616 13-488 (1081)
305 KOG0666 Cyclin C-dependent kin 100.0 1.3E-33 2.8E-38 283.0 12.5 269 742-1014 24-336 (438)
306 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-32 2.4E-37 307.9 21.4 268 743-1014 1-312 (316)
307 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.4E-32 3E-37 303.2 21.8 264 740-1014 3-287 (291)
308 KOG0579 Ste20-like serine/thre 100.0 9.4E-34 2E-38 306.6 11.6 249 744-1014 34-288 (1187)
309 cd06641 STKc_MST3 Catalytic do 100.0 1.9E-32 4.1E-37 299.7 22.1 245 744-1014 6-252 (277)
310 cd05574 STKc_phototropin_like 100.0 1.7E-32 3.7E-37 306.3 22.2 253 742-1014 1-288 (316)
311 cd06648 STKc_PAK_II Catalytic 100.0 2.1E-32 4.5E-37 300.5 22.3 247 744-1014 21-268 (285)
312 cd05578 STKc_Yank1 Catalytic d 100.0 8.4E-33 1.8E-37 299.2 18.3 247 743-1013 1-253 (258)
313 cd06917 STKc_NAK1_like Catalyt 100.0 2.2E-32 4.8E-37 299.3 21.8 247 743-1014 2-254 (277)
314 cd07860 STKc_CDK2_3 Catalytic 100.0 2.2E-32 4.7E-37 300.6 21.8 261 743-1014 1-280 (284)
315 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-32 3.4E-37 303.5 20.7 265 742-1014 1-290 (295)
316 cd07843 STKc_CDC2L1 Catalytic 100.0 1.4E-32 3.1E-37 303.4 20.2 261 742-1014 5-289 (293)
317 KOG0607 MAP kinase-interacting 100.0 2.4E-33 5.1E-38 281.9 12.3 263 734-1014 75-360 (463)
318 cd06606 STKc_MAPKKK Catalytic 100.0 8E-32 1.7E-36 291.5 25.1 251 743-1014 1-256 (260)
319 cd05122 PKc_STE Catalytic doma 100.0 3.1E-32 6.7E-37 293.5 21.5 249 743-1014 1-250 (253)
320 KOG1035 eIF-2alpha kinase GCN2 100.0 6.7E-33 1.5E-37 323.4 17.3 253 741-1014 478-870 (1351)
321 cd07845 STKc_CDK10 Catalytic d 100.0 1.7E-32 3.7E-37 305.1 19.8 262 741-1014 6-289 (309)
322 cd08530 STKc_CNK2-like Catalyt 100.0 2.5E-32 5.4E-37 295.1 20.2 249 743-1014 1-252 (256)
323 cd07836 STKc_Pho85 Catalytic d 100.0 4.2E-32 9.2E-37 298.3 22.2 262 743-1014 1-280 (284)
324 cd06616 PKc_MKK4 Catalytic dom 100.0 2.8E-32 6E-37 300.3 20.8 255 743-1014 5-266 (288)
325 cd06614 STKc_PAK Catalytic dom 100.0 6.9E-32 1.5E-36 296.8 23.8 252 740-1014 17-269 (286)
326 cd08215 STKc_Nek Catalytic dom 100.0 3.1E-32 6.7E-37 294.6 20.6 251 743-1014 1-254 (258)
327 cd06607 STKc_TAO Catalytic dom 100.0 5.3E-32 1.2E-36 300.8 22.9 245 742-1014 15-266 (307)
328 PHA03390 pk1 serine/threonine- 100.0 9.7E-32 2.1E-36 292.1 24.2 249 735-1014 7-261 (267)
329 cd07835 STKc_CDK1_like Catalyt 100.0 4.4E-32 9.6E-37 297.9 21.5 260 744-1014 1-279 (283)
330 cd07849 STKc_ERK1_2_like Catal 100.0 1.3E-32 2.7E-37 309.8 17.4 262 741-1014 4-291 (336)
331 KOG0200 Fibroblast/platelet-de 100.0 1.3E-32 2.8E-37 328.1 18.2 260 742-1019 296-579 (609)
332 PHA03210 serine/threonine kina 100.0 2.3E-32 5E-37 321.6 20.0 266 741-1014 147-453 (501)
333 cd07850 STKc_JNK Catalytic dom 100.0 3.8E-32 8.3E-37 308.0 20.9 262 740-1014 14-310 (353)
334 PHA02882 putative serine/threo 100.0 1E-31 2.2E-36 296.2 23.8 257 741-1017 11-294 (294)
335 cd07831 STKc_MOK Catalytic dom 100.0 5.5E-32 1.2E-36 297.0 21.5 257 744-1014 1-278 (282)
336 KOG0604 MAP kinase-activated p 100.0 4.7E-33 1E-37 277.9 11.6 251 742-1014 61-321 (400)
337 KOG0586 Serine/threonine prote 100.0 1.2E-32 2.6E-37 302.6 15.9 247 741-1014 55-305 (596)
338 cd08225 STKc_Nek5 Catalytic do 100.0 2.8E-32 6E-37 295.0 18.5 249 743-1014 1-253 (257)
339 KOG0612 Rho-associated, coiled 100.0 4.2E-33 9.2E-38 322.4 12.5 258 734-1014 67-337 (1317)
340 cd05633 STKc_GRK3 Catalytic do 100.0 6.8E-32 1.5E-36 295.3 21.4 241 749-1014 1-254 (279)
341 cd05572 STKc_cGK_PKG Catalytic 100.0 1.1E-31 2.4E-36 291.2 22.9 242 750-1014 1-251 (262)
342 cd05577 STKc_GRK Catalytic dom 100.0 7.6E-32 1.7E-36 294.9 21.8 244 750-1014 1-253 (277)
343 cd07840 STKc_CDK9_like Catalyt 100.0 5.7E-32 1.2E-36 297.7 20.6 260 744-1014 1-283 (287)
344 cd06657 STKc_PAK4 Catalytic do 100.0 8.6E-32 1.9E-36 296.4 22.0 244 747-1014 25-269 (292)
345 cd07865 STKc_CDK9 Catalytic do 100.0 4.7E-32 1E-36 302.0 20.1 267 741-1014 11-306 (310)
346 cd08226 PK_STRAD_beta Pseudoki 100.0 1.2E-31 2.7E-36 300.6 22.9 259 749-1014 5-307 (328)
347 KOG0983 Mitogen-activated prot 100.0 1.6E-32 3.4E-37 270.5 13.5 248 745-1014 95-348 (391)
348 cd06627 STKc_Cdc7_like Catalyt 100.0 2.5E-31 5.4E-36 286.9 24.3 247 743-1014 1-250 (254)
349 cd07864 STKc_CDK12 Catalytic d 100.0 6.5E-32 1.4E-36 299.6 20.2 264 740-1014 5-298 (302)
350 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.6E-32 5.7E-37 307.2 17.1 260 741-1014 4-290 (337)
351 cd06635 STKc_TAO1 Catalytic do 100.0 1.4E-31 3E-36 298.7 22.6 245 743-1015 26-277 (317)
352 cd05118 STKc_CMGC Catalytic do 100.0 7.6E-32 1.6E-36 296.1 20.1 259 744-1014 1-279 (283)
353 cd07855 STKc_ERK5 Catalytic do 100.0 2.6E-32 5.7E-37 306.9 16.7 263 741-1014 4-293 (334)
354 PLN00009 cyclin-dependent kina 100.0 8.6E-32 1.9E-36 297.3 20.3 263 742-1014 2-283 (294)
355 cd05611 STKc_Rim15_like Cataly 100.0 1E-31 2.2E-36 291.2 19.8 241 748-1014 2-247 (260)
356 cd07852 STKc_MAPK15 Catalytic 100.0 9.7E-32 2.1E-36 302.8 20.3 262 741-1014 6-294 (337)
357 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.4E-31 9.6E-36 286.7 24.4 250 742-1014 2-260 (264)
358 cd07838 STKc_CDK4_6_like Catal 100.0 2.3E-31 5.1E-36 292.8 22.2 260 744-1014 1-283 (287)
359 KOG4645 MAPKKK (MAP kinase kin 100.0 2.7E-33 5.8E-38 328.1 6.8 251 741-1014 1234-1493(1509)
360 cd08216 PK_STRAD Pseudokinase 100.0 4.2E-31 9E-36 294.9 24.0 261 746-1014 6-294 (314)
361 cd05583 STKc_MSK_N N-terminal 100.0 2.2E-31 4.8E-36 293.1 21.4 254 743-1017 1-265 (288)
362 cd05579 STKc_MAST_like Catalyt 100.0 1.4E-31 3E-36 290.8 19.3 244 750-1015 1-254 (265)
363 cd05581 STKc_PDK1 Catalytic do 100.0 2.3E-31 4.9E-36 291.8 21.3 249 742-1014 1-276 (280)
364 cd07830 STKc_MAK_like Catalyti 100.0 2.4E-31 5.3E-36 292.1 21.0 262 744-1014 1-279 (283)
365 KOG0662 Cyclin-dependent kinas 100.0 4.1E-32 9E-37 251.0 12.3 263 743-1014 3-282 (292)
366 cd07834 STKc_MAPK Catalytic do 100.0 8.2E-32 1.8E-36 302.8 17.4 265 743-1018 1-294 (330)
367 cd05613 STKc_MSK1_N N-terminal 100.0 4.3E-31 9.4E-36 291.1 22.6 251 743-1014 1-267 (290)
368 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.2E-31 2.5E-36 300.2 18.2 264 737-1014 5-287 (328)
369 cd06618 PKc_MKK7 Catalytic dom 100.0 3.8E-31 8.1E-36 292.4 21.7 250 742-1014 15-272 (296)
370 PTZ00024 cyclin-dependent prot 100.0 2.4E-31 5.3E-36 299.4 20.5 262 742-1014 8-312 (335)
371 cd07879 STKc_p38delta_MAPK13 C 100.0 1.3E-31 2.9E-36 302.0 17.5 255 741-1014 14-296 (342)
372 KOG1151 Tousled-like protein k 100.0 1.5E-32 3.3E-37 286.3 8.7 258 740-1013 461-739 (775)
373 cd06634 STKc_TAO2 Catalytic do 100.0 3.5E-31 7.5E-36 294.2 20.2 245 742-1014 15-266 (308)
374 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.5E-31 5.5E-36 300.0 19.2 264 733-1014 8-299 (345)
375 cd05606 STKc_beta_ARK Catalyti 100.0 6.7E-31 1.5E-35 287.4 22.0 241 749-1014 1-254 (278)
376 cd08222 STKc_Nek11 Catalytic d 100.0 6.2E-31 1.4E-35 284.9 21.4 250 743-1014 1-256 (260)
377 KOG4236 Serine/threonine prote 100.0 1.8E-32 3.9E-37 291.4 8.7 244 747-1014 569-818 (888)
378 KOG1006 Mitogen-activated prot 100.0 3.7E-33 8E-38 274.1 3.0 254 745-1014 67-326 (361)
379 cd06633 STKc_TAO3 Catalytic do 100.0 1.9E-30 4.1E-35 288.9 25.2 243 744-1014 23-272 (313)
380 cd07866 STKc_BUR1 Catalytic do 100.0 1.9E-31 4.1E-36 297.3 17.2 267 741-1014 7-307 (311)
381 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.5E-31 7.5E-36 298.6 19.1 263 741-1014 4-299 (342)
382 KOG0696 Serine/threonine prote 100.0 4.5E-32 9.7E-37 280.7 10.1 242 741-1008 348-594 (683)
383 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-30 3.4E-35 293.3 23.6 258 740-1014 13-297 (343)
384 KOG0984 Mitogen-activated prot 100.0 1.8E-31 3.9E-36 252.9 13.3 222 715-949 26-254 (282)
385 cd07857 STKc_MPK1 Catalytic do 100.0 4.5E-31 9.8E-36 296.6 18.7 260 743-1014 1-291 (332)
386 cd07829 STKc_CDK_like Catalyti 100.0 9.1E-31 2E-35 287.3 20.3 259 744-1014 1-278 (282)
387 KOG0603 Ribosomal protein S6 k 100.0 2E-31 4.3E-36 294.8 13.6 239 741-1014 321-562 (612)
388 cd07851 STKc_p38 Catalytic dom 100.0 2.5E-31 5.5E-36 299.9 14.6 257 740-1014 13-297 (343)
389 KOG0587 Traf2- and Nck-interac 100.0 1E-30 2.2E-35 296.2 18.8 262 731-1014 8-281 (953)
390 cd05610 STKc_MASTL Catalytic d 100.0 2.5E-30 5.4E-35 313.7 22.1 145 742-893 4-152 (669)
391 KOG0671 LAMMER dual specificit 100.0 1.4E-31 3E-36 277.4 9.4 259 741-1014 88-405 (415)
392 KOG0608 Warts/lats-like serine 100.0 9.3E-31 2E-35 284.1 15.7 220 730-956 614-880 (1034)
393 cd05123 STKc_AGC Catalytic dom 100.0 6.9E-30 1.5E-34 275.0 22.1 236 750-1011 1-240 (250)
394 KOG0669 Cyclin T-dependent kin 100.0 3.2E-32 7E-37 265.1 1.5 266 742-1014 17-314 (376)
395 KOG0695 Serine/threonine prote 100.0 1.7E-30 3.7E-35 262.2 13.9 246 741-1008 249-503 (593)
396 KOG0614 cGMP-dependent protein 100.0 1.9E-31 4.1E-36 283.3 6.6 240 744-1008 422-665 (732)
397 cd05576 STKc_RPK118_like Catal 100.0 1E-29 2.2E-34 271.1 18.6 219 753-1009 4-223 (237)
398 PLN03224 probable serine/threo 100.0 2.9E-28 6.3E-33 279.8 22.6 261 740-1014 143-499 (507)
399 smart00220 S_TKc Serine/Threon 100.0 3.4E-28 7.4E-33 260.1 21.3 238 754-1014 1-240 (244)
400 KOG1027 Serine/threonine prote 100.0 1.1E-29 2.5E-34 286.4 10.1 247 744-1014 511-766 (903)
401 PLN03225 Serine/threonine-prot 100.0 1.4E-28 2.9E-33 290.7 19.8 260 740-1014 130-449 (566)
402 KOG0664 Nemo-like MAPK-related 100.0 1.1E-29 2.4E-34 249.8 3.5 261 745-1014 56-342 (449)
403 KOG0668 Casein kinase II, alph 100.0 3.3E-28 7.2E-33 234.0 10.7 257 741-1014 37-321 (338)
404 KOG4237 Extracellular matrix p 99.9 3.2E-29 6.9E-34 259.8 0.1 304 57-362 37-359 (498)
405 KOG1152 Signal transduction se 99.9 3.9E-28 8.5E-33 262.2 8.3 198 740-948 559-770 (772)
406 KOG1290 Serine/threonine prote 99.9 1.6E-26 3.4E-31 246.0 19.3 132 741-878 77-221 (590)
407 KOG0665 Jun-N-terminal kinase 99.9 2.5E-27 5.5E-32 240.1 9.5 255 741-1014 16-309 (369)
408 cd00180 PKc Catalytic domain o 99.9 9.4E-26 2E-30 235.4 21.7 210 750-1015 1-214 (215)
409 KOG0576 Mitogen-activated prot 99.9 3E-27 6.6E-32 259.8 5.9 253 740-1014 13-270 (829)
410 KOG0670 U4/U6-associated splic 99.9 1.8E-26 3.9E-31 246.2 9.7 265 740-1014 430-745 (752)
411 smart00221 STYKc Protein kinas 99.9 9.4E-25 2E-29 230.7 20.2 199 744-949 1-202 (225)
412 KOG1345 Serine/threonine kinas 99.9 1.1E-25 2.4E-30 222.2 9.6 244 742-1008 24-277 (378)
413 PLN03210 Resistant to P. syrin 99.9 1.2E-23 2.7E-28 269.7 29.5 357 83-482 530-903 (1153)
414 KOG4237 Extracellular matrix p 99.9 2.4E-27 5.3E-32 245.8 -4.3 288 206-506 68-356 (498)
415 KOG1167 Serine/threonine prote 99.9 4.5E-25 9.7E-30 232.8 11.6 202 737-950 31-281 (418)
416 PLN03210 Resistant to P. syrin 99.9 7.3E-24 1.6E-28 271.8 22.4 57 556-614 846-903 (1153)
417 PRK15387 E3 ubiquitin-protein 99.9 9E-24 1.9E-28 250.5 14.7 262 230-622 202-463 (788)
418 PRK15387 E3 ubiquitin-protein 99.9 2.5E-23 5.3E-28 246.8 15.5 268 205-603 201-468 (788)
419 PLN00181 protein SPA1-RELATED; 99.9 6.5E-24 1.4E-28 264.7 9.1 195 795-1014 29-264 (793)
420 smart00750 KIND kinase non-cat 99.9 1.3E-22 2.7E-27 205.6 15.0 166 823-1018 1-168 (176)
421 KOG0195 Integrin-linked kinase 99.9 1.5E-23 3.2E-28 206.8 5.6 250 745-1020 193-447 (448)
422 KOG1165 Casein kinase (serine/ 99.9 8.1E-22 1.8E-26 200.6 16.9 259 743-1019 29-299 (449)
423 PRK15370 E3 ubiquitin-protein 99.9 5.6E-22 1.2E-26 237.3 17.4 268 134-486 179-446 (754)
424 PRK09188 serine/threonine prot 99.9 1.2E-21 2.5E-26 216.0 16.3 167 738-922 14-195 (365)
425 KOG1164 Casein kinase (serine/ 99.9 1.3E-20 2.7E-25 209.5 22.2 259 743-1019 19-297 (322)
426 KOG1163 Casein kinase (serine/ 99.9 2.8E-21 6.1E-26 188.1 14.0 259 741-1017 14-282 (341)
427 KOG0590 Checkpoint kinase and 99.8 1.5E-21 3.2E-26 229.6 8.2 257 746-1018 322-590 (601)
428 PRK15370 E3 ubiquitin-protein 99.8 3.2E-21 7E-26 230.8 10.9 229 156-491 178-406 (754)
429 COG0515 SPS1 Serine/threonine 99.8 3.5E-19 7.5E-24 200.5 24.2 260 744-1014 2-274 (384)
430 PRK10359 lipopolysaccharide co 99.8 2.8E-20 6.1E-25 190.0 12.3 171 740-941 29-216 (232)
431 KOG1240 Protein kinase contain 99.8 7.5E-21 1.6E-25 220.6 6.2 250 743-1019 24-295 (1431)
432 cd05147 RIO1_euk RIO kinase fa 99.8 1.5E-19 3.2E-24 183.5 12.9 140 747-896 2-168 (190)
433 PRK12274 serine/threonine prot 99.8 1.8E-18 3.9E-23 172.4 16.4 187 745-950 5-210 (218)
434 PF14531 Kinase-like: Kinase-l 99.8 4E-19 8.6E-24 187.1 12.3 233 744-1006 14-288 (288)
435 cd05145 RIO1_like RIO kinase f 99.8 2E-18 4.3E-23 176.3 15.9 139 747-896 2-168 (190)
436 KOG0603 Ribosomal protein S6 k 99.8 2.4E-19 5.3E-24 199.4 3.1 225 749-1009 1-232 (612)
437 KOG1023 Natriuretic peptide re 99.7 5.4E-18 1.2E-22 189.6 12.6 215 793-1019 2-224 (484)
438 KOG4158 BRPK/PTEN-induced prot 99.7 6E-18 1.3E-22 176.2 11.6 197 796-1016 274-511 (598)
439 KOG1166 Mitotic checkpoint ser 99.7 7.7E-18 1.7E-22 201.1 13.7 199 737-945 693-901 (974)
440 cd00116 LRR_RI Leucine-rich re 99.7 8.1E-20 1.8E-24 204.3 -3.0 60 425-484 251-319 (319)
441 KOG0617 Ras suppressor protein 99.7 6.1E-20 1.3E-24 169.5 -3.3 180 227-411 31-211 (264)
442 cd00116 LRR_RI Leucine-rich re 99.7 4.5E-20 9.8E-25 206.3 -6.5 57 90-146 3-64 (319)
443 KOG0617 Ras suppressor protein 99.7 3.4E-19 7.4E-24 164.6 -1.1 164 105-298 29-193 (264)
444 PRK10345 hypothetical protein; 99.7 7.4E-17 1.6E-21 165.0 14.8 136 745-892 5-156 (210)
445 smart00090 RIO RIO-like kinase 99.7 1.2E-16 2.6E-21 168.0 14.3 150 735-896 21-199 (237)
446 KOG0606 Microtubule-associated 99.7 5.9E-17 1.3E-21 188.8 6.8 214 741-1012 82-309 (1205)
447 cd05144 RIO2_C RIO kinase fami 99.7 8.8E-16 1.9E-20 158.3 14.8 145 735-896 8-176 (198)
448 PLN03150 hypothetical protein; 99.7 4E-16 8.6E-21 187.1 13.6 156 29-194 367-528 (623)
449 PRK14879 serine/threonine prot 99.7 8.7E-16 1.9E-20 160.4 14.5 134 748-894 2-143 (211)
450 KOG1033 eIF-2alpha kinase PEK/ 99.6 9.1E-17 2E-21 175.6 4.6 174 812-1011 330-508 (516)
451 PRK09605 bifunctional UGMP fam 99.6 1.8E-15 3.9E-20 179.9 14.2 139 740-895 331-477 (535)
452 TIGR03724 arch_bud32 Kae1-asso 99.6 2.5E-15 5.5E-20 155.3 13.2 130 749-894 1-138 (199)
453 PLN03150 hypothetical protein; 99.6 2.4E-15 5.3E-20 180.3 10.0 137 535-684 421-561 (623)
454 cd05120 APH_ChoK_like Aminogly 99.5 6.8E-14 1.5E-18 137.6 13.5 135 746-894 2-138 (155)
455 cd05119 RIO RIO kinase family, 99.5 5E-14 1.1E-18 144.0 12.9 136 747-896 2-165 (187)
456 PRK01723 3-deoxy-D-manno-octul 99.5 2.8E-13 6.1E-18 142.8 14.7 136 747-895 36-192 (239)
457 KOG0590 Checkpoint kinase and 99.5 6.3E-15 1.4E-19 173.9 -0.6 257 741-1014 19-285 (601)
458 KOG1266 Protein kinase [Signal 99.5 1E-13 2.2E-18 141.9 7.9 204 790-1014 119-330 (458)
459 TIGR01982 UbiB 2-polyprenylphe 99.4 2.2E-12 4.9E-17 147.9 13.4 141 747-896 122-308 (437)
460 KOG0532 Leucine-rich repeat (L 99.4 5.4E-14 1.2E-18 153.7 -0.1 159 196-362 89-247 (722)
461 KOG0532 Leucine-rich repeat (L 99.4 4.4E-14 9.6E-19 154.4 -1.3 185 203-396 73-257 (722)
462 COG4886 Leucine-rich repeat (L 99.4 8.3E-13 1.8E-17 152.0 8.4 198 137-343 97-295 (394)
463 COG4886 Leucine-rich repeat (L 99.3 2E-12 4.4E-17 148.8 9.5 198 159-366 96-294 (394)
464 KOG1243 Protein kinase [Genera 99.3 1.1E-10 2.4E-15 132.0 17.9 166 763-943 34-199 (690)
465 KOG0601 Cyclin-dependent kinas 99.2 8.7E-12 1.9E-16 140.0 6.7 248 743-1014 115-378 (524)
466 PRK04750 ubiB putative ubiquin 99.2 4E-11 8.8E-16 138.7 12.2 144 742-896 120-315 (537)
467 cd05151 ChoK Choline Kinase (C 99.2 3.7E-11 7.9E-16 120.7 10.2 131 747-894 3-136 (170)
468 KOG3207 Beta-tubulin folding c 99.2 5.1E-12 1.1E-16 134.7 3.5 118 368-485 141-259 (505)
469 cd05146 RIO3_euk RIO kinase fa 99.2 2.5E-10 5.4E-15 114.6 15.2 138 747-897 2-176 (197)
470 KOG1259 Nischarin, modulator o 99.1 1.4E-11 3E-16 124.5 0.9 132 201-338 280-412 (490)
471 KOG1259 Nischarin, modulator o 99.1 2.6E-11 5.7E-16 122.5 1.7 43 444-486 370-413 (490)
472 KOG3207 Beta-tubulin folding c 99.1 1.9E-11 4.1E-16 130.4 0.1 209 106-339 118-340 (505)
473 KOG1909 Ran GTPase-activating 99.1 6.8E-12 1.5E-16 130.3 -3.8 246 84-361 29-310 (382)
474 KOG3087 Serine/threonine prote 99.1 3E-09 6.4E-14 101.5 14.2 144 746-895 11-166 (229)
475 COG3642 Mn2+-dependent serine/ 99.0 2.5E-09 5.4E-14 102.8 13.1 131 748-894 2-140 (204)
476 KOG0531 Protein phosphatase 1, 99.0 3.7E-11 8E-16 138.4 -0.8 243 132-386 71-318 (414)
477 cd05154 ACAD10_11_like Acyl-Co 99.0 2.5E-09 5.4E-14 112.6 13.2 142 748-894 4-206 (223)
478 KOG1909 Ran GTPase-activating 99.0 2.3E-11 5E-16 126.5 -2.3 249 203-485 28-311 (382)
479 KOG0531 Protein phosphatase 1, 99.0 1E-10 2.2E-15 134.7 1.5 249 106-366 69-322 (414)
480 PF14580 LRR_9: Leucine-rich r 99.0 3.6E-10 7.8E-15 111.1 4.6 107 156-267 19-127 (175)
481 PF14580 LRR_9: Leucine-rich r 99.0 4.1E-10 8.9E-15 110.7 4.8 110 105-218 15-126 (175)
482 KOG0601 Cyclin-dependent kinas 99.0 4.7E-10 1E-14 126.2 5.1 243 740-1014 263-513 (524)
483 KOG4658 Apoptotic ATPase [Sign 98.9 1.8E-09 4E-14 132.3 7.4 130 132-264 522-653 (889)
484 PF01163 RIO1: RIO1 family; I 98.9 1.6E-08 3.6E-13 101.3 12.2 126 757-896 1-157 (188)
485 KOG0606 Microtubule-associated 98.9 5E-10 1.1E-14 131.9 1.0 251 739-1010 801-1084(1205)
486 COG0478 RIO-like serine/threon 98.8 3.3E-08 7.2E-13 100.9 12.6 149 732-896 81-253 (304)
487 COG4248 Uncharacterized protei 98.8 9.5E-08 2.1E-12 102.1 16.0 261 745-1018 14-299 (637)
488 PRK15123 lipopolysaccharide co 98.8 1.1E-07 2.3E-12 101.4 15.3 141 748-894 28-194 (268)
489 PF13855 LRR_8: Leucine rich r 98.8 4.7E-09 1E-13 84.8 3.4 61 556-616 1-61 (61)
490 KOG3741 Poly(A) ribonuclease s 98.8 1.8E-07 4E-12 102.8 16.5 170 754-945 288-474 (655)
491 KOG4658 Apoptotic ATPase [Sign 98.7 8.1E-09 1.8E-13 126.8 5.8 58 324-381 769-827 (889)
492 PF13855 LRR_8: Leucine rich r 98.7 1.2E-08 2.6E-13 82.4 3.5 59 326-384 2-60 (61)
493 COG0661 AarF Predicted unusual 98.6 3.1E-07 6.8E-12 105.9 13.1 140 748-896 131-316 (517)
494 PF08263 LRRNT_2: Leucine rich 98.5 9.8E-08 2.1E-12 70.4 3.8 38 33-71 2-43 (43)
495 PRK09902 hypothetical protein; 98.5 1.3E-06 2.8E-11 87.9 12.9 139 750-895 26-180 (216)
496 KOG2137 Protein kinase [Signal 98.4 5.7E-08 1.2E-12 110.9 1.6 151 849-1014 106-264 (700)
497 KOG1859 Leucine-rich repeat pr 98.4 7.5E-09 1.6E-13 116.8 -6.5 197 180-386 83-292 (1096)
498 KOG2982 Uncharacterized conser 98.4 1.2E-07 2.5E-12 96.7 2.4 206 204-417 44-267 (418)
499 PF06293 Kdo: Lipopolysacchari 98.4 1.6E-06 3.5E-11 89.5 10.5 106 783-895 56-171 (206)
500 PF06176 WaaY: Lipopolysacchar 98.4 5.4E-06 1.2E-10 83.7 13.3 138 740-894 29-183 (229)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.2e-112 Score=1084.36 Aligned_cols=914 Identities=30% Similarity=0.492 Sum_probs=751.4
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCC-CCCCCCcCceEEcCCCCCCCCCCCCCCCceEEEecCCCcccccccccccCCCC
Q 035998 32 NPNDLAALEDFMKNFESGIDGWGTNA-SSSDCCHWVGITCNSSSSLGLNDSIGSGRVTGLFLYKRRLKGKLSESLGNLVQ 110 (1020)
Q Consensus 32 ~~~~~~aL~~~k~~~~~~~~~~~~~~-~~~~~C~w~gv~C~~~~~~~~~~~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~ 110 (1020)
.|+|++||++||+++.++. ++...| .+.|||.|.||+|++. ++|++|+|++++++|.++.++..+++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~-~~~~~w~~~~~~c~w~gv~c~~~-----------~~v~~L~L~~~~i~~~~~~~~~~l~~ 94 (968)
T PLN00113 27 HAEELELLLSFKSSINDPL-KYLSNWNSSADVCLWQGITCNNS-----------SRVVSIDLSGKNISGKISSAIFRLPY 94 (968)
T ss_pred CHHHHHHHHHHHHhCCCCc-ccCCCCCCCCCCCcCcceecCCC-----------CcEEEEEecCCCccccCChHHhCCCC
Confidence 6799999999999996432 222223 4578999999999752 58999999999999999999999999
Q ss_pred CcEEecCCCCCCCCCCcccc-CCCCCCeeeccCCCCCCCCCCccCCCCcceeeeccCccCCCCCccccccCCcccEEEcc
Q 035998 111 LRFLNLSHNLLKGTVPVSLV-NLPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSNSLNGSVPTSICKNSSRIRVINLS 189 (1020)
Q Consensus 111 L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~ 189 (1020)
|+.|+|++|+++|.+|..+. .+++|++|+|++|.+++.+|. ..+++|++|+|++|.+++.+|..+ ..+++|++|+|+
T Consensus 95 L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~-~~l~~L~~L~Ls~n~~~~~~p~~~-~~l~~L~~L~L~ 172 (968)
T PLN00113 95 IQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR-GSIPNLETLDLSNNMLSGEIPNDI-GSFSSLKVLDLG 172 (968)
T ss_pred CCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc-cccCCCCEEECcCCcccccCChHH-hcCCCCCEEECc
Confidence 99999999999999998765 999999999999999998875 358999999999999998888876 579999999999
Q ss_pred CCCCCCCCCCccccccccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccC
Q 035998 190 VNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNI 269 (1020)
Q Consensus 190 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 269 (1020)
+|.+.+.+|..++++++|++|+|++|.+++.+|..+..+++|++|+|++|++++.+|..++++++|++|++++|++++.+
T Consensus 173 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 252 (968)
T PLN00113 173 GNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPI 252 (968)
T ss_pred cCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCC
Q 035998 270 PDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCR 349 (1020)
Q Consensus 270 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 349 (1020)
|..|+++++|++|++++|++++.+|..+.++++|+.|++++|.+.+.+|..+..+++|++|++++|.+++.+|..+..++
T Consensus 253 p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~ 332 (968)
T PLN00113 253 PSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP 332 (968)
T ss_pred ChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCcc-hhhHHHHHhhhcccchhhhhccccCCCCCCCccccccCceE
Q 035998 350 KLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIYN-LSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHFANLKV 428 (1020)
Q Consensus 350 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~~-l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~ 428 (1020)
+|+.|++++|++++.+|..++.+++|+.|++++|++.. +|. .+..+++|+.|+++.|.+...++. ....+++|+.
T Consensus 333 ~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~---~~~~~~~L~~L~l~~n~l~~~~p~-~~~~~~~L~~ 408 (968)
T PLN00113 333 RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPE---GLCSSGNLFKLILFSNSLEGEIPK-SLGACRSLRR 408 (968)
T ss_pred CCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCCh---hHhCcCCCCEEECcCCEecccCCH-HHhCCCCCCE
Confidence 99999999999999999999999999999999999874 443 456678899999999877666553 3456789999
Q ss_pred EEecccccccccchhhhcCCCCcEEecccccccccccccccCcCcCcEEeCCCCcccccCCCCCCCCcccccccCcCCCC
Q 035998 429 LVIASCGLRGSIPQWLRGCSKLQLVDLSWNQLSGTIPVWFGGFQDLFYLDLSNNTFTGEIPKNLTGLPSLITRNISLEEP 508 (1020)
Q Consensus 429 L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~s~~~~ 508 (1020)
|++++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|+|++|++.+.+|..++ .++|+.++++.+..
T Consensus 409 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ls~n~l 487 (968)
T PLN00113 409 VRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQF 487 (968)
T ss_pred EECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-cccceEEECcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999988888764 47788888877666
Q ss_pred CCCcccceeecccccccccccccCCCCeeecccCccccCCCccccCCCcceEEEecCCcceeccCccccCCCcccEEEcc
Q 035998 509 SPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELTGMTSLETLDLS 588 (1020)
Q Consensus 509 ~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 588 (1020)
....|..... + .-...|+|++|++++.+|+.|+++++|++|+|++|+++|.+|..|+.+++|+.|||+
T Consensus 488 ~~~~~~~~~~-----------l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 555 (968)
T PLN00113 488 SGAVPRKLGS-----------L-SELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLS 555 (968)
T ss_pred CCccChhhhh-----------h-hccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECC
Confidence 5544421110 0 112579999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCccccccccccccccccccccccCCCCCCCCCcCCccccCCC-CCCCCC----CCCccCCcCCccccccccC
Q 035998 589 YNNLSGAIPISLEKLSFLSKFSVANNHLTGRIPSGGQFQTFPNSSFDGNN-LCGEHR----YSCTIDRESGQVKSAKKSR 663 (1020)
Q Consensus 589 ~N~l~g~ip~~l~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~-l~~~~~----~~c~~~~~~~~~~~~~~~~ 663 (1020)
+|+++|.+|..+.++++|+.|++++|+++|.+|..+++.++...+|.||+ +||... ++|... +
T Consensus 556 ~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~---------~--- 623 (968)
T PLN00113 556 QNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV---------R--- 623 (968)
T ss_pred CCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc---------c---
Confidence 99999999999999999999999999999999999999999999999998 998642 344210 0
Q ss_pred CCceEEEEEEehhhhhHHHHHHHHHHHhhhccccCCCCccccccCCCCchhhhhccceEEEecCCCccccHHHHHHhccC
Q 035998 664 RNKYTIVGMAIGITFGSAFLLILIFMILLRAHSRGEVDPEKEEANTNDKDLEELGSKLVVLFHNKEKEISIDDILESTNN 743 (1020)
Q Consensus 664 ~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (1020)
....+.+.+++++++.+++++++++++++|++++.+.. +.+.... . .+ .........+.+.++++. ..
T Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~-~~----~~~~~~~~~~~~~~~~~~---~~ 691 (968)
T PLN00113 624 KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELK--RVENEDG--T-WE----LQFFDSKVSKSITINDIL---SS 691 (968)
T ss_pred ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccc--ccccccc--c-cc----ccccccccchhhhHHHHH---hh
Confidence 11111222211111111112222222222222211111 1110000 0 00 000001112234455543 45
Q ss_pred CCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 744 FDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
|...++||+|+||.||+|+. .++..||||++...... ..+|++.+++++|||||+++++|.+.+..++||||+++
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~ 767 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEG 767 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCC
Confidence 77788999999999999986 47899999998754322 23468889999999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|.++++. ++|.++..++.|+|+|++|||..+.++|+||||||+||+++.++.+++. ||.......
T Consensus 768 g~L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----- 834 (968)
T PLN00113 768 KNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----- 834 (968)
T ss_pred CcHHHHHhc-------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----
Confidence 999999863 6899999999999999999997666699999999999999999888875 665543211
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccC-
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYD- 981 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~- 981 (1020)
.....+++.|+|||++.+..++.++|||||||++|||+||+.||+.... .......|..............|+....
T Consensus 835 -~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (968)
T PLN00113 835 -DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSIRGD 912 (968)
T ss_pred -CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccccCC
Confidence 1223678999999999999999999999999999999999999964332 2334555655444333344445554432
Q ss_pred -ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 982 -KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 982 -~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
....++..++.+++.+||+.||++||+|+|++++|+++
T Consensus 913 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 913 VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 23456677889999999999999999999999999976
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.5e-59 Score=597.44 Aligned_cols=514 Identities=32% Similarity=0.513 Sum_probs=475.2
Q ss_pred CCCcEEecCCCCCCCCCCccccCCCCCCeeeccCCCCCCCCCCcc--CCCCcceeeeccCccCCCCCccccccCCcccEE
Q 035998 109 VQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLSSNDLSGPLPQTI--NLPSIQVLDISSNSLNGSVPTSICKNSSRIRVI 186 (1020)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~--~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L 186 (1020)
.+++.|+|++|+++|.+|..|..+++|++|+|++|++++.+|..+ .+++|++|+|++|+++|.+|.. .+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~---~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG---SIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCcc---ccCCCCEE
Confidence 579999999999999999999999999999999999998887654 7999999999999999999874 47899999
Q ss_pred EccCCCCCCCCCCccccccccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCc
Q 035998 187 NLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFS 266 (1020)
Q Consensus 187 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (1020)
+|++|.+++.+|..++++++|++|+|++|.+++.+|..+.++++|++|+|++|++++.+|..++++++|++|+|++|+++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCC
Q 035998 267 GNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLP 346 (1020)
Q Consensus 267 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 346 (1020)
+.+|..|+++++|++|++++|++++.+|..++++++|+.|++++|.+.+..|..+..+++|++|+|++|++.+.+|..+.
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~ 305 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVI 305 (968)
T ss_pred CcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCcc-hhhHHHHHhhhcccchhhhhccccCCCCCCCccccccC
Q 035998 347 RCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIYN-LSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHFAN 425 (1020)
Q Consensus 347 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~~-l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~ 425 (1020)
.+++|+.|++++|.+++..|..+..+++|+.|++++|.+.. +|. .+..+++|+.|+++.|.+...++.. ...+++
T Consensus 306 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~---~l~~~~~L~~L~Ls~n~l~~~~p~~-~~~~~~ 381 (968)
T PLN00113 306 QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPK---NLGKHNNLTVLDLSTNNLTGEIPEG-LCSSGN 381 (968)
T ss_pred CCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCCh---HHhCCCCCcEEECCCCeeEeeCChh-HhCcCC
Confidence 99999999999999999999999999999999999999974 444 4678899999999999876655543 345688
Q ss_pred ceEEEecccccccccchhhhcCCCCcEEecccccccccccccccCcCcCcEEeCCCCcccccCCCCCCCCcccccccCcC
Q 035998 426 LKVLVIASCGLRGSIPQWLRGCSKLQLVDLSWNQLSGTIPVWFGGFQDLFYLDLSNNTFTGEIPKNLTGLPSLITRNISL 505 (1020)
Q Consensus 426 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~s~ 505 (1020)
|+.|++.+|++.+.+|..+..+++|+.|++++|++++.+|..|..+++|+.|+|++|.+++.+|..+..+++|+.++++.
T Consensus 382 L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 461 (968)
T PLN00113 382 LFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLAR 461 (968)
T ss_pred CCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCcccceeecccccccccccccCCCCeeecccCccccCCCccccCCCcceEEEecCCcceeccCccccCCCcccEE
Q 035998 506 EEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELTGMTSLETL 585 (1020)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 585 (1020)
+......|..... .-.+.||+++|++++..|..|+++++|+.|+|++|++++.+|..++++++|++|
T Consensus 462 n~~~~~~p~~~~~-------------~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 528 (968)
T PLN00113 462 NKFFGGLPDSFGS-------------KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSL 528 (968)
T ss_pred ceeeeecCccccc-------------ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEE
Confidence 7665544432210 112579999999999999999999999999999999999999999999999999
Q ss_pred EccCCcccccCCccccccccccccccccccccccCCCC-CCCCCcCCccccCCCCCCC
Q 035998 586 DLSYNNLSGAIPISLEKLSFLSKFSVANNHLTGRIPSG-GQFQTFPNSSFDGNNLCGE 642 (1020)
Q Consensus 586 ~Ls~N~l~g~ip~~l~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~l~~~ 642 (1020)
+|++|+++|.+|..+..+++|+.|+|++|+++|.+|.. ..+..+....+.+|++.|.
T Consensus 529 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 586 (968)
T PLN00113 529 DLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS 586 (968)
T ss_pred ECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceee
Confidence 99999999999999999999999999999999999974 4566788888999998774
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-48 Score=432.43 Aligned_cols=288 Identities=51% Similarity=0.871 Sum_probs=254.5
Q ss_pred CCccccHHHHHHhccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEE
Q 035998 728 KEKEISIDDILESTNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYC 807 (1020)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 807 (1020)
..+.++++++..||++|...+.||+|+||.||+|..++|+.||||++.....+..++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45678999999999999999999999999999999999999999988765432156699999999999999999999999
Q ss_pred eccC-ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEE
Q 035998 808 MHKN-DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHL 886 (1020)
Q Consensus 808 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 886 (1020)
.+.+ +.++|||||++|+|.++++..... .++|.+|++||.++|+||+|||+.+.++||||||||+|||+|.++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 9998 499999999999999999976333 7899999999999999999999998889999999999999999999999
Q ss_pred eeccccccccCCCCccccccc-ccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH
Q 035998 887 ADFGLARLILSPYDTHVTTDL-VGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 887 ~Dfg~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
+|||+|+..... ... .... .||.+|+|||+...+..+.|+|||||||++.|++||+.|.+...+......+.|....
T Consensus 219 sDFGLa~~~~~~-~~~-~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 219 SDFGLAKLGPEG-DTS-VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred cCccCcccCCcc-ccc-eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 999999654321 111 1112 7999999999999999999999999999999999999999876655566689998888
Q ss_pred HhhcccccccCcccc-CccCH-HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 966 RQENRESEVLDPFIY-DKQHD-KEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.......+++||.+. ..+.. .++.++..++.+|++.+|.+||+|.||+++|+.+
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 888889999999987 55554 6888999999999999999999999999999764
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=375.89 Aligned_cols=249 Identities=27% Similarity=0.471 Sum_probs=208.1
Q ss_pred CcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCc-eEEEEEecc
Q 035998 745 DQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKND-RLLIYSFME 821 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~e~~~ 821 (1020)
+..+.||+|..|+||+++++ +++.+|+|++.... ....+++.+|++++++.+||+||.+||.|..... ..++||||+
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 55788999999999999976 68889999995543 4566899999999999999999999999999884 999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-cCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-SCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
+|+|++++... +.+++...-+|+.+|++||.|||+ + +||||||||+|||++..|+|||||||.++.+.+.
T Consensus 162 gGSLd~~~k~~----g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-- 232 (364)
T KOG0581|consen 162 GGSLDDILKRV----GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-- 232 (364)
T ss_pred CCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence 99999999875 568999999999999999999996 6 9999999999999999999999999999987543
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
...+.+||..|||||-+.+..|+.++||||||+.++|+++|+.||....+ ...+..+....+..+ ..+...+
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~-~~~~~~~Ll~~Iv~~-ppP~lP~---- 304 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP-PYLDIFELLCAIVDE-PPPRLPE---- 304 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC-CCCCHHHHHHHHhcC-CCCCCCc----
Confidence 45678999999999999999999999999999999999999999976411 112222222222221 1111111
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ....++.+++..|+++||.+||+++|+++
T Consensus 305 -~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 305 -G---EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred -c---cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 13346889999999999999999999987
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-45 Score=397.95 Aligned_cols=253 Identities=28% Similarity=0.434 Sum_probs=215.6
Q ss_pred CCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 744 FDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
+...+.||+|.||+||.|.++....||+|.++.. ....++|.+|+++|++++|++||+++++|..++..+||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 3567889999999999999987789999999865 233578999999999999999999999999988999999999999
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccc
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHV 903 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 903 (1020)
+|.+|++. ..+..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+...+. ....
T Consensus 287 sLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~-~Y~~ 360 (468)
T KOG0197|consen 287 SLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDD-EYTA 360 (468)
T ss_pred cHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCC-ceee
Confidence 99999997 3456788999999999999999999999 9999999999999999999999999999954332 2333
Q ss_pred ccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 904 TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 904 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
.....-+..|+|||.+....++.|||||||||+||||+| |+.||..+...+....++...++.++.
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~------------- 427 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPE------------- 427 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCC-------------
Confidence 333444678999999999999999999999999999999 999998776554444444433333322
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.++..++++|..||+.+|++||||+.+...|+++
T Consensus 428 ---~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 428 ---GCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred ---CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 2334799999999999999999999999998875
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=389.43 Aligned_cols=253 Identities=35% Similarity=0.519 Sum_probs=209.0
Q ss_pred CcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchh--hHHHHHHHHHHHHHcCCCccceEeeEEeccC-ceEEEEEecc
Q 035998 745 DQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ--MEREFRAEVEALSRAQHPNLVHLQGYCMHKN-DRLLIYSFME 821 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~ 821 (1020)
...+.+|+|+||+||+|.++....||||++...... ..++|.+|+.++++++|||||+++|+|.+.. ..++|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 445669999999999999975444999999865422 2568999999999999999999999999887 7899999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCC-eEecCCCCCCEEEcCCC-CeEEeeccccccccCCC
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPH-ILHRDIKSSNILLDGNF-GAHLADFGLARLILSPY 899 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~~ 899 (1020)
+|+|..+++.. ....+++..++.|+.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 124 ~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 124 GGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 99999999874 346899999999999999999999999 7 99999999999999997 99999999998764321
Q ss_pred CcccccccccccCccCccccC--CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQ--ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||....+ .+.............+..
T Consensus 199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~~~~~~v~~~~~Rp~~p~- 269 (362)
T KOG0192|consen 199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------VQVASAVVVGGLRPPIPK- 269 (362)
T ss_pred --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcCCCCCCCc-
Confidence 2334478999999999999 66999999999999999999999999976543 222222222222111111
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.+...+..++.+||+.||..||++.+++..|+.+
T Consensus 270 --------~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 270 --------ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred --------cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 1334688999999999999999999999999865
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-43 Score=367.18 Aligned_cols=203 Identities=30% Similarity=0.519 Sum_probs=182.9
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCC--chhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGD--CGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
..+|...+.||+|+||.||+|+++ ++..||||.+... .....+-+..|+.++++++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 357888999999999999999975 6889999999776 3445566889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC------CCeEEeeccc
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN------FGAHLADFGL 891 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------~~~kl~Dfg~ 891 (1020)
|||+||||.+|++.+ +.+++..+++++.|+|.||++||++ +||||||||.|||++.. -.+||+|||+
T Consensus 89 EyC~gGDLs~yi~~~----~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR----GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 999999999999986 5789999999999999999999999 99999999999999764 4589999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPK 953 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~ 953 (1020)
|+.+. ........+|++-|||||++..+.|+.|+|+||+|+|+|||++|+.||+.....
T Consensus 162 AR~L~---~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~ 220 (429)
T KOG0595|consen 162 ARFLQ---PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK 220 (429)
T ss_pred hhhCC---chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence 99884 344556689999999999999999999999999999999999999999865543
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.8e-44 Score=407.29 Aligned_cols=259 Identities=31% Similarity=0.484 Sum_probs=220.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEeccCceE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 814 (1020)
.+....+.||+|+||+||+|+.. +.+.||||.++..... ..++|++|++.+.+++|||||+++|+|.+++.++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 44566789999999999999743 3567999999987755 6789999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCe
Q 035998 815 LIYSFMENGSLDYWLHEKLD----------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGA 884 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 884 (1020)
+|+|||+.|||.+||+-... .+.+++..+.++||.|||.||+||-++ .+|||||.++|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEE
Confidence 99999999999999975321 134588999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHH
Q 035998 885 HLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVI 963 (1020)
Q Consensus 885 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 963 (1020)
||+|||++|...+.+..+......-+.+|||||.+..+++|.+||||||||++||+++ |+.||.+....+..+.++
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~--- 719 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR--- 719 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH---
Confidence 9999999999877665555545556789999999999999999999999999999999 999998766544333222
Q ss_pred HHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 964 RMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 964 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.+.. -+.+..++.++++||..||+..|.+||+|+||-..|+..
T Consensus 720 ----~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 720 ----AGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred ----cCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 2221 122344566899999999999999999999999999864
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-44 Score=372.59 Aligned_cols=254 Identities=27% Similarity=0.412 Sum_probs=206.8
Q ss_pred ccCCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCCchh-------hHHHHHHHHHHHHHcCCCccceEeeEEeccCc
Q 035998 741 TNNFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGDCGQ-------MEREFRAEVEALSRAQHPNLVHLQGYCMHKND 812 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 812 (1020)
.+.|.+.+.+|+|+||.|-+|. .++|+.||||++.+.... ....+.+|+++|++++|||||+++++|...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3457888999999999999997 458999999999765311 12346799999999999999999999999999
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC---CCeEEeec
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN---FGAHLADF 889 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Df 889 (1020)
.||||||++||+|.+++... ..+.++....++.|++.|+.|||+. ||+||||||+|||+..+ ..+||+||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n----k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN----KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred eEEEEEEecCccHHHHHHhc----cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 99999999999999988765 5677888899999999999999999 99999999999999765 77999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCCCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCCC-cccHHHHHHHH
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQASV---ATYKGDVYSFGVVLLELLTGKRPMDMCKPKG-SRDLISWVIRM 965 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~pf~~~~~~~-~~~~~~~~~~~ 965 (1020)
|+|+..+ ....+.+.+||+.|.|||++.++. +..++|+||+||++|-+++|.+||....... ..+++......
T Consensus 324 GlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~ 400 (475)
T KOG0615|consen 324 GLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA 400 (475)
T ss_pred chhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc
Confidence 9999874 345667789999999999987654 3348899999999999999999997544322 22222111111
Q ss_pred HhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHH
Q 035998 966 RQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS--WLD 1017 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~ 1017 (1020)
+. ..+..+..++..++|.+|+..||++||+++|+++ |+.
T Consensus 401 ---------f~----p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 401 ---------FG----PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred ---------cc----ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 11 1223345567899999999999999999999997 554
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-43 Score=385.18 Aligned_cols=247 Identities=26% Similarity=0.421 Sum_probs=211.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
.+|...++||+|+|+.||.++. .+|..||+|++.+.. ....+.+.+|+++.+.++|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5799999999999999999997 789999999997642 334567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
|+|+.++|..+++++ ..+++.+++.+++||+.|+.|||++ +|+|||||..|++++++.++||+|||+|..+..
T Consensus 98 ELC~~~sL~el~Krr----k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR----KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHHhc----CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 999999999999865 6899999999999999999999999 999999999999999999999999999999865
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
+. ....+.+|||-|.|||++....++..+||||+|||||-|++|++||....-.+ ....++.... .-|
T Consensus 171 ~~--Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke------ty~~Ik~~~Y----~~P 238 (592)
T KOG0575|consen 171 DG--ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE------TYNKIKLNEY----SMP 238 (592)
T ss_pred cc--cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH------HHHHHHhcCc----ccc
Confidence 43 33456799999999999999999999999999999999999999997432222 2222222111 111
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.....+..+||.++|+.+|.+|||+++|++
T Consensus 239 -------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 239 -------SHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred -------cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 122235789999999999999999999986
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-43 Score=349.71 Aligned_cols=256 Identities=26% Similarity=0.412 Sum_probs=209.5
Q ss_pred CCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeE-EeccCc-eEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGY-CMHKND-RLLIY 817 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~-~~~~~~-~~lv~ 817 (1020)
+|++.++||+|.||+||+++ ..+|..||.|.+.-.. ....++...|+.++++++|||||+++++ +.++.. .+|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 47888999999999999997 4689999999887443 2334578899999999999999999984 444444 78999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCC-CeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEP-HILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
||+++|||...++.....+..+++..+|+++.|++.||.++|....+ -|+||||||.||+++.+|.+|++|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 99999999999998888889999999999999999999999994322 38999999999999999999999999999885
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
+ ......+.+|||.||+||.+.+.+|++|+||||+||++|||+.-++||.+. .+.+....+.+. ..+.+.+
T Consensus 180 s--~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI~qg-d~~~~p~ 250 (375)
T KOG0591|consen 180 S--KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKIEQG-DYPPLPD 250 (375)
T ss_pred c--hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHHHcC-CCCCCcH
Confidence 4 234556789999999999999999999999999999999999999999753 333333333332 1111111
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
......+.+++..|+..||+.||+...+++.
T Consensus 251 --------~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 251 --------EHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred --------HHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 2334568899999999999999985544443
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=360.17 Aligned_cols=242 Identities=28% Similarity=0.383 Sum_probs=202.1
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
.++|++.++||+|+||+||.++.+ +++.+|+|++++.. ....+...+|..++.+++||+||+++-.|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 357899999999999999999865 68899999998754 22345688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
+||+.||.|..++.+. ..++++.+..++..|+.||.|||++ +|||||+||+|||+|.+|+++|+|||+|+...
T Consensus 104 ld~~~GGeLf~hL~~e----g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE----GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EeccCCccHHHHHHhc----CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 9999999999999865 5789999999999999999999999 99999999999999999999999999999653
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
.. ...+...+||+.|||||++.+..|+.++|+||+|+++|||++|.+||...+.. .+...+...... .-
T Consensus 177 ~~--~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~~~~~I~~~k~~---~~ 245 (357)
T KOG0598|consen 177 KD--GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------KMYDKILKGKLP---LP 245 (357)
T ss_pred cC--CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH------HHHHHHhcCcCC---CC
Confidence 32 23445579999999999999999999999999999999999999999754332 222222222200 00
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCC
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRP 1007 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1007 (1020)
|.. ...+..+++.+.++.||++|.
T Consensus 246 p~~-------ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 246 PGY-------LSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred Ccc-------CCHHHHHHHHHHhccCHHHhc
Confidence 100 113578999999999999996
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.6e-42 Score=342.25 Aligned_cols=264 Identities=25% Similarity=0.338 Sum_probs=209.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
+.|+.+.++|+|+||.||+++.+ +|+.||||+|.... +...+-..+|++++++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45788899999999999999976 59999999997654 3445667899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|++.--|++ +.+. +..++.+.+.+++.|++.|+.|+|++ ++|||||||+|||++.+|.+|+||||+|+....+
T Consensus 82 ~~dhTvL~e-Le~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 82 YCDHTVLHE-LERY---PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred ecchHHHHH-HHhc---cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 998754443 3333 45678899999999999999999999 9999999999999999999999999999998654
Q ss_pred CCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHH--------HHH-h-
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVI--------RMR-Q- 967 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~--------~~~-~- 967 (1020)
. ...+.++.|..|+|||.+.+ ..|+.++||||+||++.||++|.+-|.+..+-+..-.+.... .+. .
T Consensus 155 g--d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 155 G--DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred c--chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 3 34567888999999998877 799999999999999999999999987544322111111110 000 0
Q ss_pred ----hcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 968 ----ENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 968 ----~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.-..++..++...+...+.....+.+++..|++.||.+|++-+|++.
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 01122222233333333444557899999999999999999999875
No 14
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=7.9e-45 Score=374.87 Aligned_cols=483 Identities=27% Similarity=0.372 Sum_probs=332.3
Q ss_pred cccCCCCCcEEecCCCCCCCCCCccccCCCCCCeeeccCCCCCCCCCCccCCCCcceeeeccCccCCCCCccccccCCcc
Q 035998 104 SLGNLVQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSNSLNGSVPTSICKNSSRI 183 (1020)
Q Consensus 104 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L 183 (1020)
.+..-..|+.|++++|.++ .+-+.+.+|..|++|++++|+++..+|....+..++.|+.++|+++ .+|..+. .+.+|
T Consensus 40 ~wW~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~-s~~~l 116 (565)
T KOG0472|consen 40 NWWEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLS-ELPEQIG-SLISL 116 (565)
T ss_pred hhhhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHh-hccHHHh-hhhhh
Confidence 3445566777777777777 5556677777777777777777766666667777777777777777 7777664 46667
Q ss_pred cEEEccCCCCCCCCCCccccccccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCC
Q 035998 184 RVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSN 263 (1020)
Q Consensus 184 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 263 (1020)
..+++++|.+. .+|+.++.+..|+.|+..+|+++ ..|.+++.+.+|..|++.+|+++...|..+ +++.|++||..+|
T Consensus 117 ~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N 193 (565)
T KOG0472|consen 117 VKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSN 193 (565)
T ss_pred hhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchh
Confidence 77788888777 67888899999999999999998 688899999999999999999995544444 4999999999999
Q ss_pred cCcccCcccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCC
Q 035998 264 NFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPT 343 (1020)
Q Consensus 264 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 343 (1020)
.++ .+|..++++.+|..|+|..|+|. ..| .|.+++.|.+|+++.|+|.........++.+|.+|||.+|+++ ..|+
T Consensus 194 ~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pd 269 (565)
T KOG0472|consen 194 LLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPD 269 (565)
T ss_pred hhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCch
Confidence 997 78888999999999999999998 556 8999999999999999999766677779999999999999999 8999
Q ss_pred CCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCcchhhHHHHHhhhcccchhhhh-----cccc---CCCC
Q 035998 344 NLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIYNLSSALQVLQQCRNLTTLVLT-----LNFR---NEKL 415 (1020)
Q Consensus 344 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~L~~L~l~-----~n~~---~~~~ 415 (1020)
.++-+++|.+||+|+|.|+ ..|..++++ +|+.|-+.+|+++.+...+-..+.-.-|++|.-. .+.- .+..
T Consensus 270 e~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~ 347 (565)
T KOG0472|consen 270 EICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETA 347 (565)
T ss_pred HHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccccc
Confidence 9999999999999999999 578889999 9999999999999998776554444455555431 1100 0111
Q ss_pred CCCccc------cccCceEEEecccccccccchhhhcCCC---CcEEecccccccccccccccCcCcCcE-EeCCCCccc
Q 035998 416 PTDPRL------HFANLKVLVIASCGLRGSIPQWLRGCSK---LQLVDLSWNQLSGTIPVWFGGFQDLFY-LDLSNNTFT 485 (1020)
Q Consensus 416 ~~~~~~------~~~~L~~L~l~~n~l~~~~p~~l~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~-L~Ls~N~l~ 485 (1020)
++.+.. ..-+.+.|.++.-+++ .+|.......+ ...++++.|++. .+|..+..+..+.+ +++++|.+.
T Consensus 348 ~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is 425 (565)
T KOG0472|consen 348 MTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS 425 (565)
T ss_pred CCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc
Confidence 111111 2234566666666666 34444433333 667777777776 66666665555543 344444443
Q ss_pred ccCCCCCCCCcccccccCcCCCCCCCcccceeecccccccccccccCCCCeeecccCccccCCCccccCCCcceEEEecC
Q 035998 486 GEIPKNLTGLPSLITRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKH 565 (1020)
Q Consensus 486 ~~~p~~~~~l~~L~~l~~s~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~ 565 (1020)
.+|..++.+++|..+ +|++|-+. .+|.+++.+..|+.||+|.
T Consensus 426 -fv~~~l~~l~kLt~L------------------------------------~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~ 467 (565)
T KOG0472|consen 426 -FVPLELSQLQKLTFL------------------------------------DLSNNLLN-DLPEEMGSLVRLQTLNLSF 467 (565)
T ss_pred -cchHHHHhhhcceee------------------------------------ecccchhh-hcchhhhhhhhhheecccc
Confidence 666666666655433 33333332 3444445555555555555
Q ss_pred CcceeccCccccCCCcccEEEccCCcccccCCccccccccccccccccccccccCCCCCCCCCcCCccccCCCC
Q 035998 566 NNLSGPIPSELTGMTSLETLDLSYNNLSGAIPISLEKLSFLSKFSVANNHLTGRIPSGGQFQTFPNSSFDGNNL 639 (1020)
Q Consensus 566 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~l 639 (1020)
|++. .+|..+..+.-|+++-.++|++....|..+.++.+|..|||.+|.+...+|..|.+.++..+...||++
T Consensus 468 NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 468 NRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred cccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 5443 444444444444444444444443323334444444444444444444444444444444444444443
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-40 Score=358.77 Aligned_cols=252 Identities=26% Similarity=0.384 Sum_probs=209.9
Q ss_pred HhccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCce
Q 035998 739 ESTNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 739 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 813 (1020)
+..++|..++.||+|+|++|++|+. .+++.||||++.+.- ....+.+..|-++|.+| +||.|++++..|+++...
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3456789999999999999999985 468999999986542 12234577899999999 899999999999999999
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
|+|+||+++|+|-++++.. +.+++..++.++.+|+.|++|||++ |||||||||+|||+|+||++||+|||.|+
T Consensus 150 YFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred EEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccc
Confidence 9999999999999999987 6899999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCc---------c--cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHH
Q 035998 894 LILSPYDT---------H--VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWV 962 (1020)
Q Consensus 894 ~~~~~~~~---------~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~ 962 (1020)
.+...... . .....+||..|++||++.....++.+|+|+||||+|+|+.|++||.+.++ +....
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-----yliFq 297 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-----YLIFQ 297 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-----HHHHH
Confidence 87532111 1 12458999999999999999999999999999999999999999976443 22222
Q ss_pred HHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 963 IRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 963 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..+..+...++-+. ..+.+|+.+.+..||.+|+|.++|.+
T Consensus 298 kI~~l~y~fp~~fp------------~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 298 KIQALDYEFPEGFP------------EDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHhcccCCCCCC------------HHHHHHHHHHHccCccccccHHHHhh
Confidence 22222222222221 35789999999999999999999876
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-42 Score=361.14 Aligned_cols=261 Identities=25% Similarity=0.326 Sum_probs=208.8
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHH-HHHHHHHHHHHcC-CCccceEeeEEeccC-ceEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMER-EFRAEVEALSRAQ-HPNLVHLQGYCMHKN-DRLLI 816 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~lv 816 (1020)
.++|.++++||.|.||+||+|+. .+|..||||+++......++ .=.+|+..+++++ |||||++.+++.+.+ ..++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 35799999999999999999984 57899999998766544333 3368999999998 999999999999988 89999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
||||+. +|.+.++++ ...+++..+..|+.||++||+|+|++ |+.|||+||+|||+.....+||+|||+||.+.
T Consensus 89 fE~Md~-NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred HHhhhh-hHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 999976 899998876 46899999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCcccccccccccCccCcccc-CCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYG-QASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
+. ...+.++.|..|+|||++ +.+.|+.++|+|++|||++|+.+-++-|.+..+- |.+-.+..+..........
T Consensus 162 Sk---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~---Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 162 SK---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEI---DQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred cC---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHH---HHHHHHHHHhCCCccccch
Confidence 42 334567889999999964 6789999999999999999999999988754332 3332222221111111111
Q ss_pred C----------------ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 D----------------PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 d----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. +......-+.+..+..+++.+|+++||.+||||+|+++
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 0 00011112235567889999999999999999999987
No 17
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.4e-44 Score=370.25 Aligned_cols=476 Identities=27% Similarity=0.325 Sum_probs=352.2
Q ss_pred eEEEecCCCcccccccccccCCCCCcEEecCCCCCCCCCCccccCCCCCCeeeccCCCCCCCCCCccCCCCcceeeeccC
Q 035998 87 VTGLFLYKRRLKGKLSESLGNLVQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSN 166 (1020)
Q Consensus 87 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N 166 (1020)
...+++++|.+. .+.+.+.+|..|.+|++++|+++ ..|++++.+..++.|+.++|+++..++...++.+|++|++++|
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n 124 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSN 124 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhcccc
Confidence 455778888887 45667899999999999999999 8999999999999999999999977777779999999999999
Q ss_pred ccCCCCCccccccCCcccEEEccCCCCCCCCCCccccccccccccccccccccccchhhhhhcccccccccccccCCCCC
Q 035998 167 SLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLS 246 (1020)
Q Consensus 167 ~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 246 (1020)
.+. .+|++++ .+..|..++..+|+++ ..|..++++.+|..|++.+|+++...|+ .-.++.|++||..+|-++ .+|
T Consensus 125 ~~~-el~~~i~-~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~-~i~m~~L~~ld~~~N~L~-tlP 199 (565)
T KOG0472|consen 125 ELK-ELPDSIG-RLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPEN-HIAMKRLKHLDCNSNLLE-TLP 199 (565)
T ss_pred cee-ecCchHH-HHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHH-HHHHHHHHhcccchhhhh-cCC
Confidence 998 8888885 4677899999999998 7888999999999999999999955444 445999999999999998 889
Q ss_pred cccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCC
Q 035998 247 PSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTN 326 (1020)
Q Consensus 247 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 326 (1020)
+.++.+.+|.-|+|.+|+|. ..| .|.++..|..|+++.|+|.-...+....++++.+|||.+|+++ ..|+.+.-+.+
T Consensus 200 ~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrs 276 (565)
T KOG0472|consen 200 PELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRS 276 (565)
T ss_pred hhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhh
Confidence 99999999999999999998 566 8999999999999999999544445569999999999999999 67778888999
Q ss_pred cCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCcccccCCC---CCCeee-------CCCCCC------cchhh
Q 035998 327 LTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFE---SLSYLS-------LSNSSI------YNLSS 390 (1020)
Q Consensus 327 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~---~L~~L~-------l~~N~i------~~l~~ 390 (1020)
|++||+|+|.|+ ..|.+++++ .|+.|-+.+|++..+ -..+-+.. -|++|. ++.-.- +..+.
T Consensus 277 L~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTi-Rr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~ 353 (565)
T KOG0472|consen 277 LERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTI-RREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSE 353 (565)
T ss_pred hhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHH-HHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCC
Confidence 999999999999 688889999 999999999988521 11110000 011111 000000 00001
Q ss_pred HHHHHhhhcccchhhhhccccCCCCCCCccccc--cCceEEEecccccccccchhhhcCCCCcE-Eeccccccccccccc
Q 035998 391 ALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHF--ANLKVLVIASCGLRGSIPQWLRGCSKLQL-VDLSWNQLSGTIPVW 467 (1020)
Q Consensus 391 ~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~--~~L~~L~l~~n~l~~~~p~~l~~l~~L~~-L~Ls~N~l~~~~p~~ 467 (1020)
.......+.+.+.|+++.-.... +|...+..- .-....+++.|++. ++|..+..++.+.+ +++++|+++ .+|..
T Consensus 354 ~~~~~~~~i~tkiL~~s~~qlt~-VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~ 430 (565)
T KOG0472|consen 354 SFPDIYAIITTKILDVSDKQLTL-VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLE 430 (565)
T ss_pred cccchhhhhhhhhhccccccccc-CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHH
Confidence 11122233344444444332211 111111111 12566777788777 67777777776544 566666665 88888
Q ss_pred ccCcCcCcEEeCCCCcccccCCCCCCCCcccccccCcCCCCCCCcccceeecccccccccccccCCCCeeecccCccccC
Q 035998 468 FGGFQDLFYLDLSNNTFTGEIPKNLTGLPSLITRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGS 547 (1020)
Q Consensus 468 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~s~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~Ls~N~l~~~ 547 (1020)
++.+++|..|+|++|.+. .+|..++.+..|+.+ |+|.|+|. .
T Consensus 431 l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~L------------------------------------nlS~NrFr-~ 472 (565)
T KOG0472|consen 431 LSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTL------------------------------------NLSFNRFR-M 472 (565)
T ss_pred HHhhhcceeeecccchhh-hcchhhhhhhhhhee------------------------------------cccccccc-c
Confidence 888888888888888887 788888887776544 34444443 2
Q ss_pred CCccccCCCcceEEEecCCcceeccCccccCCCcccEEEccCCcccccCCcccccccccccccccccccc
Q 035998 548 IWPEFGNLKKLHVFDLKHNNLSGPIPSELTGMTSLETLDLSYNNLSGAIPISLEKLSFLSKFSVANNHLT 617 (1020)
Q Consensus 548 ~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~l~ls~N~l~ 617 (1020)
+|...-.+..|+.+-.++|++....|+.+.+|.+|.+|||.+|.|. .||+.++++++|+.|.+++|++.
T Consensus 473 lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 473 LPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred chHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 4444455555666666667776444444777888888888888887 77778888888888888888877
No 18
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.6e-40 Score=324.41 Aligned_cols=261 Identities=28% Similarity=0.379 Sum_probs=209.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.+|...+++|+|.||.||+|+. ++|+.||||+++... ........+|++.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4688889999999999999985 579999999997543 2345678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
||+. +|...++.. ...++..++..++.++++|++|||++ .|+||||||.|+|++.+|.+||+|||+++.++++
T Consensus 82 fm~t-dLe~vIkd~---~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDK---NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhccc---ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9976 888888764 45788999999999999999999999 9999999999999999999999999999998876
Q ss_pred CCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH---hhcccccc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR---QENRESEV 974 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 974 (1020)
.... ...+-|..|+|||.+.+ +.|+..+|+||.|||+.||+-|.+-|.+..+ .++....-+.. .+..+++.
T Consensus 155 ~~~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD---idQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 155 NRIQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD---IDQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred Cccc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch---HHHHHHHHHHcCCCCcccCccc
Confidence 5432 33477889999997655 6799999999999999999999888765432 23333333322 22222221
Q ss_pred cC----------cc-ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LD----------PF-IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d----------~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. |. ......+.+.....+++.+|+.+||.+|++++|+++
T Consensus 230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 10 10 011123445566799999999999999999999986
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=340.08 Aligned_cols=262 Identities=28% Similarity=0.454 Sum_probs=211.9
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.+.|+..+.||.|..+.||+|+. +.+..||||++.-+.. .....+++|++.|+.++||||++++..|..+...|+||+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 46789999999999999999985 5789999999976543 335789999999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
||.+|++.+.++..+. ..+++..+..|.+++++||.|||.+ |.||||||+.|||++.+|.|||+|||.+..+.+.
T Consensus 105 fMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 9999999999998754 4589999999999999999999999 9999999999999999999999999999887664
Q ss_pred CCccc-c-cccccccCccCccccCC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 899 YDTHV-T-TDLVGTLGYIPPEYGQA--SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 899 ~~~~~-~-~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
+.... . ...+||+.|||||++.. ..|+.|+||||||++..|+.+|..||....+-.. .. +.-.+..+..
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv------Ll-~tLqn~pp~~ 252 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV------LL-LTLQNDPPTL 252 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH------HH-HHhcCCCCCc
Confidence 43221 1 45789999999998543 4799999999999999999999999987655321 11 1111111111
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+........+.+++..|++.||.+|||++++++
T Consensus 253 ~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 253 LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1001111112222336889999999999999999999986
No 20
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-41 Score=373.24 Aligned_cols=256 Identities=27% Similarity=0.421 Sum_probs=214.5
Q ss_pred CCCcCCeeeccCCeEEEEEEeC----CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP----DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
...+.++||.|.||+|++|+++ ....||||.++.-. ....++|..|+.+|.++.||||+++.|+....+..+||+
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 3456789999999999999875 23569999998654 345678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
|||++|+|+.||+.. .+.+++.+..-++++||.||.||-+. ++|||||.++|||++.+-.+|++|||++|...+
T Consensus 710 EyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred hhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeeccc
Confidence 999999999999976 24589999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCcc-cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 898 PYDTH-VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 898 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
+.... .+....-+.+|.|||.+..++++.++||||+||+|||.++ |.+||-.+...+....++. ..
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~------gy------ 851 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQ------GY------ 851 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHh------cc------
Confidence 43221 1111223578999999999999999999999999999988 9999987665433222221 11
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.-+.+.+++..+++||..||++|-.+||.|.+|+..|.+++
T Consensus 852 ----RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 852 ----RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred ----CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 12234456678999999999999999999999999999874
No 21
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-40 Score=350.78 Aligned_cols=265 Identities=28% Similarity=0.356 Sum_probs=204.6
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc--CceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 816 (1020)
+.|+.+++||+|.||.||+|+. .+|+.||+|++..+. .....-+.+||.++++++||||+++.+...+. ...|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 4577789999999999999984 579999999987664 34456678999999999999999999998876 688999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
+|||+. ||.-++... .-.++..++..++.|++.||+|+|.+ +|+|||||.+|||||.+|.+||+|||+|+++.
T Consensus 197 FeYMdh-DL~GLl~~p---~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSP---GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred Eecccc-hhhhhhcCC---CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence 999987 666555532 34689999999999999999999999 99999999999999999999999999999775
Q ss_pred CCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc--c
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES--E 973 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~ 973 (1020)
.. .....+..+.|..|+|||.+.+ ..|+.++|+||.|||+.||++|++.|.+..+-+..+.+-.......+..+. .
T Consensus 270 ~~-~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 270 PS-GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred CC-CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 43 2333566788999999997765 589999999999999999999999998654433222222222222222222 1
Q ss_pred ccCcccc---CccC-------HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 974 VLDPFIY---DKQH-------DKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 974 ~~d~~~~---~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...-... ..+. .......++|+..+|..||.+|.|+.++++
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1100000 0110 111224678999999999999999999986
No 22
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-41 Score=360.78 Aligned_cols=328 Identities=22% Similarity=0.260 Sum_probs=182.6
Q ss_pred CCCCCCCCCcCceEEcCCCCCCCC-----CCCCCCCceEEEecCCCcccccccccccCCCCCcEEecCCCCCCCCCCccc
Q 035998 55 TNASSSDCCHWVGITCNSSSSLGL-----NDSIGSGRVTGLFLYKRRLKGKLSESLGNLVQLRFLNLSHNLLKGTVPVSL 129 (1020)
Q Consensus 55 ~~~~~~~~C~w~gv~C~~~~~~~~-----~~~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l 129 (1020)
..++.++.|.-.-..|+......+ +... ...+..|++++|.+...-++.|-++++|+.++|..|.++ .||...
T Consensus 44 ~~cpa~c~c~~~lldcs~~~lea~~~~~l~g~l-p~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~ 121 (873)
T KOG4194|consen 44 SECPATCPCNTRLLDCSDRELEAIDKSRLKGFL-PSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFG 121 (873)
T ss_pred ccCCCcCCCCceeeecCccccccccccccCCcC-ccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccc
Confidence 345666778888888987654332 1121 134555666666666555555666666666666666666 566555
Q ss_pred cCCCCCCeeeccCCCCCCCCCCcc-CCCCcceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCccccccccc
Q 035998 130 VNLPNLEVLDLSSNDLSGPLPQTI-NLPSIQVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLE 208 (1020)
Q Consensus 130 ~~l~~L~~L~L~~n~l~~~~p~~~-~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 208 (1020)
+...+|+.|+|.+|.|+..-.+.+ .++.|+.||||.|.|+ .+|..-|..-.++++|+|++|.|+...-..|.++.+|.
T Consensus 122 ~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~ 200 (873)
T KOG4194|consen 122 HESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLL 200 (873)
T ss_pred ccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchhe
Confidence 555556666666666665544444 4566666666666665 55555555555566666666666655555555555666
Q ss_pred cccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeeccccc
Q 035998 209 HLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNR 288 (1020)
Q Consensus 209 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 288 (1020)
.|.|++|+++...+..|.++++|+.|+|..|+|.-..--+|.+|++|+.|.|..|.++......|-++.++++|+|+.|+
T Consensus 201 tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~ 280 (873)
T KOG4194|consen 201 TLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNR 280 (873)
T ss_pred eeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccch
Confidence 66666666654444445555555555555555553333455555555555555555555444555555555555555555
Q ss_pred ccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCccc
Q 035998 289 FTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPET 368 (1020)
Q Consensus 289 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 368 (1020)
++..-..++.++++|+.|+||+|.|..+.++.+.-.++|++|+|++|+|+...+.+|..+..|++|+|++|+++..-..+
T Consensus 281 l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~a 360 (873)
T KOG4194|consen 281 LQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGA 360 (873)
T ss_pred hhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhH
Confidence 55444455555555555555555555444444444455555555555555444444544555555555555554444444
Q ss_pred ccCCCCCCeeeCCCCCC
Q 035998 369 YKNFESLSYLSLSNSSI 385 (1020)
Q Consensus 369 ~~~l~~L~~L~l~~N~i 385 (1020)
|..+++|+.|||++|.|
T Consensus 361 f~~lssL~~LdLr~N~l 377 (873)
T KOG4194|consen 361 FVGLSSLHKLDLRSNEL 377 (873)
T ss_pred HHHhhhhhhhcCcCCeE
Confidence 44444444444444443
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=359.71 Aligned_cols=265 Identities=29% Similarity=0.456 Sum_probs=209.2
Q ss_pred HHHHHhccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCc
Q 035998 735 DDILESTNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKND 812 (1020)
Q Consensus 735 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 812 (1020)
+++....+++.+.+.||+|.||+||+|+|. ..||||++..+. +...+.|+.|+.++++-+|.||+-+.|||.....
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 344444455678899999999999999985 579999998665 3445789999999999999999999999998877
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLA 892 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 892 (1020)
.||+.||+|.+|+.+++... ..++..+.+.|++|||+||.|||.+ +|||||||..||++++++.|||+|||++
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred -eeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccce
Confidence 99999999999999998753 5688889999999999999999999 9999999999999999999999999998
Q ss_pred ccccCCCCcccccccccccCccCccccCC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 893 RLILSPYDTHVTTDLVGTLGYIPPEYGQA---SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 893 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
..-.............|...|||||+++. .+|++.+||||||+|+|||+||..||.. ... +.+-|. ..+..
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~---dqIifm--VGrG~ 609 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNR---DQIIFM--VGRGY 609 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CCh---hheEEE--ecccc
Confidence 75432222222333567789999998754 4799999999999999999999999973 222 111111 11111
Q ss_pred ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 970 RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 970 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
... |... ....+.+++.+|+..||.+++++||.+.+|+..|++++
T Consensus 610 l~p---d~s~---~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 610 LMP---DLSK---IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred cCc---cchh---hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 011 1100 12234557889999999999999999999999888764
No 24
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=390.21 Aligned_cols=260 Identities=30% Similarity=0.463 Sum_probs=213.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCC--CC----EEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPD--GR----NVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 814 (1020)
.+.+..+.||+|+||.||.|...+ |. .||||.++... .+...+|.+|+.+|++++|||||+++|+|.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 445677899999999999998642 33 49999998765 345578999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 815 LIYSFMENGSLDYWLHEKLD---GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
|++|||++|||..|+++.+. ....++..+.+.++.|||+|+.||+++ ++|||||.++|+|++....+||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccch
Confidence 99999999999999987532 245788999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcc
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENR 970 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 970 (1020)
|+.+.+.+.........-...|||||.+..+.++.|+|||||||++||++| |..||......+....+ ...++
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~------~~ggR 922 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDV------LEGGR 922 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHH------HhCCc
Confidence 997655443333333344578999999999999999999999999999999 99999765443322211 11111
Q ss_pred cccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 971 ESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 971 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
. +++..++..++++|..||+.+|++||+|.++++.+..++
T Consensus 923 L----------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 923 L----------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred c----------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 1 112234456899999999999999999999999887763
No 25
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=323.39 Aligned_cols=236 Identities=25% Similarity=0.326 Sum_probs=199.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|+..+.+|.|+||.|.+++.+ +|..+|+|++.+..- ...+...+|..+++.+.||+++++++.|.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 35788999999999999999865 588899999987642 22345778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||++||-|..++++. +.+++..++.++.||+.|++|||+. +|++||+||+|||+|++|.+||+|||+|+...
T Consensus 124 eyv~GGElFS~Lrk~----~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~- 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS----GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVS- 195 (355)
T ss_pred eccCCccHHHHHHhc----CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEec-
Confidence 999999999999975 5789999999999999999999999 99999999999999999999999999999873
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH-hhcccccccC
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR-QENRESEVLD 976 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d 976 (1020)
..+.+.+|||.|+|||++..+.+..++|+|||||++|||+.|.+||...++. .....+. ..-..+..+.
T Consensus 196 ----~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~------~iY~KI~~~~v~fP~~fs 265 (355)
T KOG0616|consen 196 ----GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI------QIYEKILEGKVKFPSYFS 265 (355)
T ss_pred ----CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH------HHHHHHHhCcccCCcccC
Confidence 2356689999999999999999999999999999999999999999865541 1111111 1111122121
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCC
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRP 1007 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1007 (1020)
..+.+|+...++.|-.+|.
T Consensus 266 ------------~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 266 ------------SDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred ------------HHHHHHHHHHHhhhhHhhh
Confidence 2578899999999998883
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-40 Score=356.20 Aligned_cols=250 Identities=25% Similarity=0.393 Sum_probs=210.9
Q ss_pred ccCCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
...|+..++||+|+.|.||.|+ ..+++.||||++........+-+.+|+.+|+..+|+|||.+++.|...+..|+||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 3457778899999999999997 457889999999877666667789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
|+||+|.+.+... .+++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||+|..+....
T Consensus 352 m~ggsLTDvVt~~-----~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT-----RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred cCCCchhhhhhcc-----cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 9999999988764 589999999999999999999999 99999999999999999999999999999875432
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
......+||+.|||||+.....|++|+||||||++++||+-|++||-...+ +...+.+...+ ..++-.+
T Consensus 424 --~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P------lrAlyLIa~ng-~P~lk~~-- 492 (550)
T KOG0578|consen 424 --SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP------LRALYLIATNG-TPKLKNP-- 492 (550)
T ss_pred --CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh------HHHHHHHhhcC-CCCcCCc--
Confidence 245667999999999999999999999999999999999999999964222 22222222221 1222221
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......+.+++.+|++.||++|++++|+++
T Consensus 493 -----~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 493 -----EKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -----cccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 222346889999999999999999999987
No 27
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.2e-39 Score=349.41 Aligned_cols=253 Identities=26% Similarity=0.335 Sum_probs=208.1
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchh---hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQ---MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
..++|+.+++||+|+||+||+|+-+ +|..+|+|++++.... ..+.+..|..+|....+|+||+++-.|++.+..|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999854 6999999999887532 23457889999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
||||++|||+..+|... +.++++.+..++.+.+.|++.+|+. |+|||||||+|+|||..|++||+|||+|.-.
T Consensus 219 iMEylPGGD~mTLL~~~----~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK----DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHHhc----CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 99999999999999875 6899999999999999999999999 9999999999999999999999999998543
Q ss_pred cC---------------------CCCcc-----c-------------------ccccccccCccCccccCCCCCCchhhH
Q 035998 896 LS---------------------PYDTH-----V-------------------TTDLVGTLGYIPPEYGQASVATYKGDV 930 (1020)
Q Consensus 896 ~~---------------------~~~~~-----~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv 930 (1020)
.. +.+.. . ....+|||.|||||++.+..|+..+|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 21 00000 0 012589999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcc-cHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC-
Q 035998 931 YSFGVVLLELLTGKRPMDMCKPKGSR-DLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT- 1008 (1020)
Q Consensus 931 wSlGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs- 1008 (1020)
||+|||||||+.|.+||....+.+.. ..+.|......+.... ...+..++|.+|+. ||++|..
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~--------------~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVD--------------LSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCc--------------ccHHHHHHHHHHhc-CHHHhcCc
Confidence 99999999999999999877665543 3344443333322211 11367899999999 9999985
Q ss_pred --HHHHHH
Q 035998 1009 --TQQLVS 1014 (1020)
Q Consensus 1009 --~~evl~ 1014 (1020)
++||.+
T Consensus 437 ~G~~EIK~ 444 (550)
T KOG0605|consen 437 KGAEEIKK 444 (550)
T ss_pred ccHHHHhc
Confidence 666544
No 28
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=343.19 Aligned_cols=253 Identities=30% Similarity=0.471 Sum_probs=202.9
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccC--ceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN--DRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 818 (1020)
.++...+.||+|+||.||++... +|..+|||..........+.+.+|++++++++|||||+.+|...... ..++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35677899999999999999865 48999999987653333567899999999999999999999855544 5889999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC-CCCeEEeeccccccccC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG-NFGAHLADFGLARLILS 897 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~~~ 897 (1020)
|+++|+|.+++.+. +. .+++..+..+.+||++||+|||++ |||||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~--g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRY--GG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred ccCCCcHHHHHHHc--CC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 99999999999875 22 689999999999999999999999 9999999999999999 79999999999987653
Q ss_pred -CCCcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 898 -PYDTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 898 -~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
...........||+.|||||++..+ ....++||||+||++.||+||+.||... .+...+...+......+.+.
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P~ip 245 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSLPEIP 245 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCCCCCC
Confidence 1112234457899999999998853 3446999999999999999999999753 22233333333333222222
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+ .......+++.+|+..||++||||+++++
T Consensus 246 ~---------~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 246 D---------SLSDEAKDFLRKCFKRDPEKRPTAEELLE 275 (313)
T ss_pred c---------ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 1 12235789999999999999999999987
No 29
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9e-41 Score=359.30 Aligned_cols=410 Identities=22% Similarity=0.240 Sum_probs=213.6
Q ss_pred cCceEEcCCCCCCCCCCCCCCCceEEEecCCCcccccccccccCC--CCCcEEecCCCCCCCCCCccccCCCCCCeeecc
Q 035998 64 HWVGITCNSSSSLGLNDSIGSGRVTGLFLYKRRLKGKLSESLGNL--VQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLS 141 (1020)
Q Consensus 64 ~w~gv~C~~~~~~~~~~~~~~~~v~~l~l~~~~l~~~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 141 (1020)
.-.-|.|.+......|.+.+ -+...++.+++.+...--..+..+ ..-+.||+++|.++..-+..|.++++|+++++.
T Consensus 32 ~g~vvd~ga~~~~~cpa~c~-c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~ 110 (873)
T KOG4194|consen 32 VGNVVDAGAGDLSECPATCP-CNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLN 110 (873)
T ss_pred cCcccccCCCccccCCCcCC-CCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeec
Confidence 33445555443333344332 234455655555443211111111 233456666666666666666666666666666
Q ss_pred CCCCCCCCCCcc-CCCCcceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCccccccccccccccccccccc
Q 035998 142 SNDLSGPLPQTI-NLPSIQVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGG 220 (1020)
Q Consensus 142 ~n~l~~~~p~~~-~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 220 (1020)
+|.++ .+|... ...+|++|+|.+|.|+ ++..+-.+.++.|+.||||.|.|+...-+.|..-.
T Consensus 111 ~N~Lt-~IP~f~~~sghl~~L~L~~N~I~-sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~--------------- 173 (873)
T KOG4194|consen 111 KNELT-RIPRFGHESGHLEKLDLRHNLIS-SVTSEELSALPALRSLDLSRNLISEIPKPSFPAKV--------------- 173 (873)
T ss_pred cchhh-hcccccccccceeEEeeeccccc-cccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCC---------------
Confidence 66665 333333 3344555555555555 33333333444444555555544443334444444
Q ss_pred cchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCC
Q 035998 221 IADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNS 300 (1020)
Q Consensus 221 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 300 (1020)
++++|+|++|+|+......|.++.+|..|.|++|+++..++..|.+|++|+.|+|..|+|.-.---.|.++
T Consensus 174 ---------ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL 244 (873)
T KOG4194|consen 174 ---------NIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGL 244 (873)
T ss_pred ---------CceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCc
Confidence 45555555555554444455555555555555555555455555555555555555555543333345555
Q ss_pred cccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeC
Q 035998 301 PTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSL 380 (1020)
Q Consensus 301 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 380 (1020)
++|+.|.|..|.+.......|..+.++++|+|+.|+++..-..++-++++|+.|+||+|.|..+.++.|...++|+.|+|
T Consensus 245 ~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdL 324 (873)
T KOG4194|consen 245 PSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDL 324 (873)
T ss_pred hhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEec
Confidence 55555555555555555555555555666666666655544555555666666666666665555555555566666666
Q ss_pred CCCCCcchhhHHHHHhhhcccchhhhhccccCCCCCCCccccccCceEEEecccccccccchhhhcCCCCcEEecccccc
Q 035998 381 SNSSIYNLSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGSIPQWLRGCSKLQLVDLSWNQL 460 (1020)
Q Consensus 381 ~~N~i~~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 460 (1020)
++|+|+.+++. .|..+..|++|.|+.| .+...-...|.++++|+.|||++|.|
T Consensus 325 s~N~i~~l~~~--sf~~L~~Le~LnLs~N-------------------------si~~l~e~af~~lssL~~LdLr~N~l 377 (873)
T KOG4194|consen 325 SSNRITRLDEG--SFRVLSQLEELNLSHN-------------------------SIDHLAEGAFVGLSSLHKLDLRSNEL 377 (873)
T ss_pred cccccccCChh--HHHHHHHhhhhccccc-------------------------chHHHHhhHHHHhhhhhhhcCcCCeE
Confidence 66665554432 1222222222222221 11112223455556666666666666
Q ss_pred cccccc---cccCcCcCcEEeCCCCcccccCCCCCCCCcccccccCcCCCCCCCcccceeecccccccccccccCCCCee
Q 035998 461 SGTIPV---WFGGFQDLFYLDLSNNTFTGEIPKNLTGLPSLITRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTI 537 (1020)
Q Consensus 461 ~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~s~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l 537 (1020)
++.+.+ .|.+|++|+.|+|.+|++.
T Consensus 378 s~~IEDaa~~f~gl~~LrkL~l~gNqlk---------------------------------------------------- 405 (873)
T KOG4194|consen 378 SWCIEDAAVAFNGLPSLRKLRLTGNQLK---------------------------------------------------- 405 (873)
T ss_pred EEEEecchhhhccchhhhheeecCceee----------------------------------------------------
Confidence 655543 3555555666665555554
Q ss_pred ecccCccccCCCccccCCCcceEEEecCCcceeccCccccCCCcccEEEcc
Q 035998 538 DLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELTGMTSLETLDLS 588 (1020)
Q Consensus 538 ~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 588 (1020)
...-.+|.+|..|+.|||.+|.|....|+.|..+ .|++|-++
T Consensus 406 --------~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 406 --------SIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred --------ecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 2222356677777777777777777777777777 67777654
No 30
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.1e-38 Score=357.43 Aligned_cols=263 Identities=28% Similarity=0.441 Sum_probs=205.6
Q ss_pred hccCCCcCCeeeccCCeEEEEEEe------CCCCEEEEEEecCCch-hhHHHHHHHHHHHHHc-CCCccceEeeEEeccC
Q 035998 740 STNNFDQANIIGCGGFGLVYRATL------PDGRNVAIKRLSGDCG-QMEREFRAEVEALSRA-QHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 811 (1020)
+.++|++.++||+|+||.||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||++++++|...+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 456799999999999999999974 2356899999875432 2345688999999999 8999999999887654
Q ss_pred -ceEEEEEeccCCChhhhhhhcCCC-------------------------------------------------------
Q 035998 812 -DRLLIYSFMENGSLDYWLHEKLDG------------------------------------------------------- 835 (1020)
Q Consensus 812 -~~~lv~e~~~~g~L~~~l~~~~~~------------------------------------------------------- 835 (1020)
..++||||+++|+|.+++......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 578999999999999998753210
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcccccccccccC
Q 035998 836 ---PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLG 912 (1020)
Q Consensus 836 ---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~ 912 (1020)
...+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...............++..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 23578889999999999999999999 999999999999999999999999999986543222222233456778
Q ss_pred ccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHH
Q 035998 913 YIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRV 991 (1020)
Q Consensus 913 y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 991 (1020)
|+|||++.+..++.++|||||||++|||++ |..||......+ ... ........ .. . +......+
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~~---~~~~~~~~-~~-----~----~~~~~~~l 306 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EFC---QRLKDGTR-MR-----A----PENATPEI 306 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HHH---HHHhcCCC-CC-----C----CCCCCHHH
Confidence 999999999999999999999999999997 999997543211 111 11111110 00 0 11122468
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 992 LDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 992 ~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.+++.+||+.||++||++.|+++.|++++
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 89999999999999999999999999864
No 31
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=343.53 Aligned_cols=264 Identities=26% Similarity=0.393 Sum_probs=219.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
....+.++||+|-||+|..++...+..||||+++.+... ..++|.+|+++|.+++|||||+++|+|..++..++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 456678999999999999999987899999999987644 3478999999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++|+|.+|+.+... +.........|+.|||.||+||.+. ++||||+.++|+|+|.++++||+|||+++.+.+.+.
T Consensus 618 EnGDLnqFl~ahea--pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 618 ENGDLNQFLSAHEL--PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred hcCcHHHHHHhccC--cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCc
Confidence 99999999987622 2234456678999999999999999 999999999999999999999999999998877666
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT--GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
....+..+-+.+|||||.+.-++++.++|||+||+++||+++ ...||....+. +.++-...+..... +.
T Consensus 693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---~vven~~~~~~~~~------~~ 763 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE---QVVENAGEFFRDQG------RQ 763 (807)
T ss_pred eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---HHHHhhhhhcCCCC------cc
Confidence 667777778899999999999999999999999999999877 78899755432 22222222221111 11
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.....++.+...++++|.+||+.|-++||+++++...|++.
T Consensus 764 ~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 764 VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 22234555667899999999999999999999999988763
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-38 Score=348.37 Aligned_cols=249 Identities=27% Similarity=0.402 Sum_probs=205.5
Q ss_pred hccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCC----ch-hhHHHHHHHHHHHHHcC-CCccceEeeEEeccCc
Q 035998 740 STNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGD----CG-QMEREFRAEVEALSRAQ-HPNLVHLQGYCMHKND 812 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 812 (1020)
...+|.+.+.||+|+||+|+.|.. .++..||+|++... .. ...+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 356899999999999999999975 47899999977653 12 23456778999999998 9999999999999999
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC-CCeEEeeccc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN-FGAHLADFGL 891 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~ 891 (1020)
.++||||+.||+|.+++... ..+.+.++..+++|++.|++|+|++ +|+||||||+||+++.+ +.+||+|||+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~----g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNK----GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred EEEEEEecCCccHHHHHHHc----CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 99999999999999999874 5688899999999999999999999 99999999999999999 9999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCC-CC-chhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH-hh
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASV-AT-YKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR-QE 968 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~ 968 (1020)
+.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+..... .....+. ..
T Consensus 168 s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~------~l~~ki~~~~ 239 (370)
T KOG0583|consen 168 SAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP------NLYRKIRKGE 239 (370)
T ss_pred ccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH------HHHHHHhcCC
Confidence 98763 2234456679999999999998876 65 8999999999999999999999862211 1111111 11
Q ss_pred cccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 NRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...+..++ ..++..++.+|+..||.+|+++.++++
T Consensus 240 ~~~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 240 FKIPSYLL-----------SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred ccCCCCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 11222110 246789999999999999999999985
No 33
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-39 Score=344.46 Aligned_cols=248 Identities=27% Similarity=0.454 Sum_probs=205.4
Q ss_pred ccccHHHHHHhccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEec
Q 035998 730 KEISIDDILESTNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMH 809 (1020)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 809 (1020)
-+++++++ ..++-+|.|+.|.||.|+.+ ++.||||+++. .-+.+++-+++++||||+.+.|+|..
T Consensus 119 WeiPFe~I-------sELeWlGSGaQGAVF~Grl~-netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 119 WEIPFEEI-------SELEWLGSGAQGAVFLGRLH-NETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred ccCCHHHh-------hhhhhhccCcccceeeeecc-CceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecC
Confidence 34566665 44678999999999999985 68999998753 23457889999999999999999999
Q ss_pred cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 810 KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 810 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
...++||||||..|-|...++.. ..++....+.|..+||.||.|||.+ .|||||||.-||||..+..|||+||
T Consensus 184 sPcyCIiMEfCa~GqL~~VLka~----~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDF 256 (904)
T KOG4721|consen 184 SPCYCIIMEFCAQGQLYEVLKAG----RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDF 256 (904)
T ss_pred CceeEEeeeccccccHHHHHhcc----CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccc
Confidence 99999999999999999998865 5788889999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
|-++...+. .......||..|||||+++.++.+.|+||||||||+|||+||..||....... +-|.. ..
T Consensus 257 GTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----IIwGV----Gs 325 (904)
T KOG4721|consen 257 GTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----IIWGV----GS 325 (904)
T ss_pred cchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----eEEec----cC
Confidence 999887432 33445899999999999999999999999999999999999999996432211 11111 00
Q ss_pred ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 970 RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 970 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
. .+.-..+..++..+.-|++.||+-.|..||+|++++..|+
T Consensus 326 N-------sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 326 N-------SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred C-------cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 0 0111233445567888999999999999999999998775
No 34
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=341.27 Aligned_cols=246 Identities=28% Similarity=0.390 Sum_probs=207.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+... ...+.+.+|++++++++|||||.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888999999999999999865 678899999876543 234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+.| +|..++..- ..++++.+..++.|++.||.|||+. +|+|||+||.||+++..|.+|+||||+|+.+..
T Consensus 82 ~a~g-~L~~il~~d----~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD----GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred hhhh-hHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 9987 888888754 6789999999999999999999999 999999999999999999999999999998743
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
...+.+...|||.|||||...+++|+..+|.||+|||+|||++|++||... ...+.+..+..+ |.
T Consensus 153 -~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~Lv~~I~~d--------~v 217 (808)
T KOG0597|consen 153 -NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQLVKSILKD--------PV 217 (808)
T ss_pred -CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHHHHHHHhcC--------CC
Confidence 445667789999999999999999999999999999999999999999631 222222222221 11
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. .+......+..++...+..||..|.+-.+++.
T Consensus 218 ~---~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 K---PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred C---CcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1 12244456889999999999999999888765
No 35
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-39 Score=356.68 Aligned_cols=259 Identities=27% Similarity=0.423 Sum_probs=208.0
Q ss_pred HHHhccCCCcCCeeeccCCeEEEEEEeCC--C---CEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEe
Q 035998 737 ILESTNNFDQANIIGCGGFGLVYRATLPD--G---RNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCM 808 (1020)
Q Consensus 737 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~--~---~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 808 (1020)
++-..++....++||+|+||+||+|+++. + ..||||..+.+. .....+|.+|+++|++++|||||++||++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 33345566677999999999999998642 2 238999988633 445678999999999999999999999999
Q ss_pred ccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEee
Q 035998 809 HKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLAD 888 (1020)
Q Consensus 809 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 888 (1020)
.+...++|||+|.||+|.+|++.. +..++..++..++.++|.||+|||++ ++|||||.++|+|++.++.+||+|
T Consensus 232 ~~~Pl~ivmEl~~gGsL~~~L~k~---~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISD 305 (474)
T KOG0194|consen 232 LEEPLMLVMELCNGGSLDDYLKKN---KKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISD 305 (474)
T ss_pred CCCccEEEEEecCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCc
Confidence 999999999999999999999976 23689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCccccc-ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHH
Q 035998 889 FGLARLILSPYDTHVTT-DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMR 966 (1020)
Q Consensus 889 fg~~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 966 (1020)
||+++... ...... ...-+..|+|||.+..+.+++++|||||||++||+++ |..||.+....+. ...+.
T Consensus 306 FGLs~~~~---~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v------~~kI~ 376 (474)
T KOG0194|consen 306 FGLSRAGS---QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEV------KAKIV 376 (474)
T ss_pred cccccCCc---ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHH------HHHHH
Confidence 99987642 111111 2234679999999999999999999999999999999 8999986544321 11111
Q ss_pred hhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 967 QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 967 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
..+.... .+...+..+..++.+||..+|++||+|.++.++++.+
T Consensus 377 ~~~~r~~---------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~ 420 (474)
T KOG0194|consen 377 KNGYRMP---------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL 420 (474)
T ss_pred hcCccCC---------CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence 1111000 1112334677888899999999999999999999875
No 36
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=309.86 Aligned_cols=266 Identities=25% Similarity=0.334 Sum_probs=214.7
Q ss_pred hccCCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccC-----ce
Q 035998 740 STNNFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN-----DR 813 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 813 (1020)
..++|++.+.+|+|+|+.||.++ ..+++.||+|++.-...+..+...+|++..++++|||+++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45789999999999999999998 5578899999998776666778899999999999999999998876543 48
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
|++++|...|+|.+.+.+...++..+++.+.++|+.+|++||++||+. .++++||||||.||++.+++.+++.|||.++
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 999999999999999998877788999999999999999999999998 5569999999999999999999999999987
Q ss_pred cccCCCCc-------ccccccccccCccCccccCC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcc-cHHHHH
Q 035998 894 LILSPYDT-------HVTTDLVGTLGYIPPEYGQA---SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSR-DLISWV 962 (1020)
Q Consensus 894 ~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~-~~~~~~ 962 (1020)
...-.... ........|..|+|||.+.- ...+.++|||||||++|.|+.|..||+.....++. .+.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA--- 254 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA--- 254 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe---
Confidence 64211010 11233567899999997754 46789999999999999999999999753322211 111
Q ss_pred HHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 963 IRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 963 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
+..+.+..+......+.+.+++.+|++.||.+||++.+++..++.++
T Consensus 255 -----------v~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 255 -----------VQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -----------eeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11111111222224567899999999999999999999999988753
No 37
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-38 Score=325.37 Aligned_cols=246 Identities=26% Similarity=0.389 Sum_probs=208.1
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchh---hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQ---MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
..+|++.+.+|+|.||+|-+|+. ..|+.||||.++++.-. +.-.+++|+++|+.++||||+.+|++|...+..++|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 45788899999999999999974 68999999999876533 334578999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||..+|.|.+|+.++ +.+++.+++++++||..|+.|+|++ +++|||||.+|||+|+++.+||+|||++..+.
T Consensus 132 MEYaS~GeLYDYiSer----~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISER----GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEecCCccHHHHHHHh----ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc
Confidence 9999999999999886 6799999999999999999999999 99999999999999999999999999998773
Q ss_pred CCCCcccccccccccCccCccccCCCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVA-TYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
+.......+|++-|.+||+..+.+| ++.+|-||+||++|-++.|..||++.. .-..+.++..... .
T Consensus 205 ---~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D------hk~lvrQIs~GaY----r 271 (668)
T KOG0611|consen 205 ---DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD------HKRLVRQISRGAY----R 271 (668)
T ss_pred ---cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch------HHHHHHHhhcccc----c
Confidence 3345567899999999999999877 588999999999999999999998542 2222222222111 1
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.++.+....-+|++|+..+|++|.|+.||..
T Consensus 272 --------EP~~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 272 --------EPETPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred --------CCCCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 1112234667999999999999999999865
No 38
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.9e-37 Score=341.64 Aligned_cols=265 Identities=25% Similarity=0.372 Sum_probs=205.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCC-----------------CCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPD-----------------GRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHL 803 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 803 (1020)
++|++.+.||+|+||.||+|++++ +..||+|.+.... .....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999997532 3369999987653 3334578999999999999999999
Q ss_pred eeEEeccCceEEEEEeccCCChhhhhhhcCC---------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEe
Q 035998 804 QGYCMHKNDRLLIYSFMENGSLDYWLHEKLD---------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILH 868 (1020)
Q Consensus 804 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 868 (1020)
++++.+.+..++||||+++|+|.+++..... ....+++..+..++.||+.||+|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 9999999999999999999999998865321 123578889999999999999999999 9999
Q ss_pred cCCCCCCEEEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc--CCCC
Q 035998 869 RDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT--GKRP 946 (1020)
Q Consensus 869 ~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--g~~p 946 (1020)
|||||+||+++.++.+||+|||+++...............++..|+|||++.++.++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999987643322222333456789999999988899999999999999999987 5667
Q ss_pred CCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 947 MDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 947 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
|...... .................. ...++.....+.+++.+||+.||++|||+++|.+.|++
T Consensus 242 ~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELTDE---QVIENAGEFFRDQGRQVY------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCCHH---HHHHHHHHHhhhcccccc------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 7644322 222222111111100000 00111223468899999999999999999999999874
No 39
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.2e-37 Score=350.90 Aligned_cols=263 Identities=27% Similarity=0.426 Sum_probs=206.3
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCch-hhHHHHHHHHHHHHHc-CCCccceEeeEEeccC
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCG-QMEREFRAEVEALSRA-QHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 811 (1020)
..++|++.+.||+|+||.||+|+.. ++..||||++..... .....+.+|+++++.+ +|+||++++++|....
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3457899999999999999998742 345799999976542 2345688999999999 8999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcCC---------------------------------------------------------
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLD--------------------------------------------------------- 834 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 834 (1020)
..++||||+++|+|.++++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 99999999999999999864311
Q ss_pred ---------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccc
Q 035998 835 ---------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 835 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
....+++.+++.++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++............
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 113478889999999999999999999 99999999999999999999999999998764332222222
Q ss_pred ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccC
Q 035998 906 DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQH 984 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 984 (1020)
...++..|+|||++....++.++|||||||++|||++ |+.||....... .... .. ...... ..+.
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~~~~---~~-~~~~~~--~~~~------ 338 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--KFYK---MV-KRGYQM--SRPD------ 338 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--HHHH---HH-HcccCc--cCCC------
Confidence 3345678999999988899999999999999999997 999997543211 1111 11 111000 0110
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 985 DKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 985 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
....++.+++.+||+.||++||++.++++.|++++
T Consensus 339 -~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 -FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 01246889999999999999999999999999874
No 40
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-38 Score=346.23 Aligned_cols=241 Identities=26% Similarity=0.359 Sum_probs=201.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 816 (1020)
++|...++||+|.||+|++|..+ +++.+|||+++++. ....+..+.|.+++... +||.++.++..|+..++.|.|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 56899999999999999999875 67899999999875 33445677888888877 599999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+.|||+..+.+ ...+++..+..++..|+.||+|||++ +|||||||.+|||+|.+|++||+|||+++.-.
T Consensus 448 mey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 448 MEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 99999999544433 25789999999999999999999999 99999999999999999999999999998753
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
. ....+++.+||+.|||||++.++.|+.++|+|||||+||||+.|+.||.+.+..+..+.+ ..+ +.
T Consensus 520 ~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI------~~d----~~-- 585 (694)
T KOG0694|consen 520 G--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSI------VND----EV-- 585 (694)
T ss_pred C--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH------hcC----CC--
Confidence 2 334667899999999999999999999999999999999999999999754433222211 111 11
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTT 1009 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1009 (1020)
.++.....+...++++++..+|++|..+
T Consensus 586 -----~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 586 -----RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -----CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1222334568899999999999999976
No 41
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=333.70 Aligned_cols=248 Identities=27% Similarity=0.398 Sum_probs=208.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhh-HHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQM-EREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..|+..+.||+|+||.||+|.. ..++.||+|++.-+.... ..++++|+.++..++++||.++|+.+......+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4577789999999999999985 468899999998765433 46789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
|.||++.+.++.. ..+++.....+++++..|+.|+|.+ +.+|||||+.||++..+|.+|++|||++..+....
T Consensus 93 ~~gGsv~~lL~~~----~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG----NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred hcCcchhhhhccC----CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 9999998888753 3457788889999999999999999 99999999999999999999999999998875432
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
......+||+.|||||++.+..|+.|+||||||++.+||++|.+|+....+.... ..++.-..|.+
T Consensus 166 --~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl------------flIpk~~PP~L 231 (467)
T KOG0201|consen 166 --KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL------------FLIPKSAPPRL 231 (467)
T ss_pred --hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE------------EeccCCCCCcc
Confidence 3336789999999999999999999999999999999999999999876552211 11122222222
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+ .....+.+++..|+.+||+.||+|.++++
T Consensus 232 ~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 232 DG----DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred cc----ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 22 22345889999999999999999999986
No 42
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.6e-37 Score=336.49 Aligned_cols=258 Identities=22% Similarity=0.318 Sum_probs=203.5
Q ss_pred ccccHHHHHHhccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchh---hHHHHHHHHHHHHHcCCCccceEeeE
Q 035998 730 KEISIDDILESTNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ---MEREFRAEVEALSRAQHPNLVHLQGY 806 (1020)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~ 806 (1020)
+.++.+++ +......||+|++|.||+|.+ +|+.||||++...... ..+.+.+|++++++++||||++++++
T Consensus 13 ~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~ 86 (283)
T PHA02988 13 KCIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF 86 (283)
T ss_pred eecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence 45566665 223346799999999999998 6899999999765322 24567899999999999999999999
Q ss_pred Eec----cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC
Q 035998 807 CMH----KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF 882 (1020)
Q Consensus 807 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 882 (1020)
+.+ ....++||||+++|+|.+++... ..+++..+..++.|++.|++|||+.. +++||||||+||+++.++
T Consensus 87 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~ 160 (283)
T PHA02988 87 IIDIVDDLPRLSLILEYCTRGYLREVLDKE----KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENY 160 (283)
T ss_pred EEecccCCCceEEEEEeCCCCcHHHHHhhC----CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCC
Confidence 876 34678999999999999998764 46789999999999999999999732 788999999999999999
Q ss_pred CeEEeeccccccccCCCCcccccccccccCccCccccCC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHH
Q 035998 883 GAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQA--SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLIS 960 (1020)
Q Consensus 883 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~ 960 (1020)
.+|++|||+++....+. ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... +..
T Consensus 161 ~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~---~~~- 231 (283)
T PHA02988 161 KLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK---EIY- 231 (283)
T ss_pred cEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH---HHH-
Confidence 99999999998653321 23467889999999876 68999999999999999999999999754321 111
Q ss_pred HHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 961 WVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 961 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
........... .+......+.+++.+||+.||++|||++|+++.|+.+
T Consensus 232 --~~i~~~~~~~~---------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 232 --DLIINKNNSLK---------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred --HHHHhcCCCCC---------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 11111111000 0112234688999999999999999999999998864
No 43
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=327.81 Aligned_cols=252 Identities=25% Similarity=0.332 Sum_probs=195.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--------------hhHHHHHHHHHHHHHcCCCccceEee
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--------------QMEREFRAEVEALSRAQHPNLVHLQG 805 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l~~ 805 (1020)
-++|++.+.||+|.||.|-+|+.. +++.||||++.+... ...+...+|+.+|++++|||||++++
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 468999999999999999999854 789999999865321 01246889999999999999999999
Q ss_pred EEec--cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC
Q 035998 806 YCMH--KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG 883 (1020)
Q Consensus 806 ~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 883 (1020)
+..+ .+..|||+|||..|.+... ......+++++++++++++..||+|||.+ +||||||||+|+|++.+|+
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~----p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWC----PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred eecCcccCceEEEEEeccCCccccC----CCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCc
Confidence 9876 4678999999998875332 22223389999999999999999999999 9999999999999999999
Q ss_pred eEEeeccccccccCC---CCcccccccccccCccCccccCCC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcc
Q 035998 884 AHLADFGLARLILSP---YDTHVTTDLVGTLGYIPPEYGQAS----VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSR 956 (1020)
Q Consensus 884 ~kl~Dfg~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~ 956 (1020)
+||+|||.+...... .........+|||.|+|||...++ ..+.+.||||+||++|.|+.|+.||.+....+.
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l- 327 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL- 327 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH-
Confidence 999999999865221 111222347899999999976653 346799999999999999999999964322111
Q ss_pred cHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 957 DLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...+.. +| +..+..+++...+.++|.+|+++||+.|.+..+|..
T Consensus 328 -----~~KIvn--------~p-L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 328 -----FDKIVN--------DP-LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred -----HHHHhc--------Cc-ccCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 111111 11 111112234457899999999999999999998854
No 44
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-37 Score=316.01 Aligned_cols=264 Identities=27% Similarity=0.296 Sum_probs=204.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEec--cCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMH--KNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 816 (1020)
++|+.+..|++|+||.||+|+.+ +++.||+|+++-+.. .-.-...+|+.++.+.+|||||.+.++... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45788899999999999999864 688999999976532 112346789999999999999999998875 3678999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
||||+. ||...+... ++++...++.-++.|+++|++|||.+ .|+||||||+|+|+...|.+||+|||+||.++
T Consensus 156 Me~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 999987 788888765 35788999999999999999999999 99999999999999999999999999999998
Q ss_pred CCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
++. ...+..+-|..|+|||.+.+ ..|+.++|+||+|||+.||+++++-|.+...-+..+.+-.....+.+..++...
T Consensus 229 sp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 229 SPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred CCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 763 33455678999999997655 579999999999999999999999997654332222222222222222222211
Q ss_pred Ccccc-----CccC--------HH--HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 DPFIY-----DKQH--------DK--EMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 d~~~~-----~~~~--------~~--~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..... ..++ .. -...-++++..++.+||.+|.|++|.++
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 11100 0000 01 1245678999999999999999999886
No 45
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-38 Score=339.13 Aligned_cols=263 Identities=27% Similarity=0.389 Sum_probs=219.0
Q ss_pred HHHHHhccCCCcCCeeeccCCeEEEEEEeCC-CCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCce
Q 035998 735 DDILESTNNFDQANIIGCGGFGLVYRATLPD-GRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 735 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 813 (1020)
+++.-...+..+..+||.|-||.||.|.|+. .-.||||.++.+... .++|..|+.+|+.++|||+|+++|+|..+...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 4444455677888999999999999999874 456999999987654 56899999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
|||+|||..|+|.+|+++. ....++....+.++.||+.||+||..+ .+|||||.++|+|+.++..+|++|||+++
T Consensus 339 YIiTEfM~yGNLLdYLRec--nr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLREC--NRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred EEEEecccCccHHHHHHHh--chhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhh
Confidence 9999999999999999986 345677788899999999999999999 99999999999999999999999999999
Q ss_pred cccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 894 LILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 894 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
.+..+.. .......-...|.|||-+....++.|+|||+|||++||+.| |-.||.+.......++.+...++.+++
T Consensus 414 lMtgDTY-TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~Pe--- 489 (1157)
T KOG4278|consen 414 LMTGDTY-TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPE--- 489 (1157)
T ss_pred hhcCCce-ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCC---
Confidence 8754321 11122223568999999999999999999999999999999 888997655444444444433333332
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.++..+++||+.||++.|.+||+++|+-+.||.|+
T Consensus 490 -------------GCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 490 -------------GCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred -------------CCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 33457999999999999999999999999998763
No 46
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.9e-37 Score=349.74 Aligned_cols=262 Identities=27% Similarity=0.423 Sum_probs=206.1
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe------CCCCEEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCc
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL------PDGRNVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKND 812 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 812 (1020)
.++|++.+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+++++.+ +||||++++++|.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45789999999999999999963 245689999987543 23345688999999999 89999999999999999
Q ss_pred eEEEEEeccCCChhhhhhhcCC----------------------------------------------------------
Q 035998 813 RLLIYSFMENGSLDYWLHEKLD---------------------------------------------------------- 834 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 834 (1020)
.++||||+++|+|.+++++...
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999999865321
Q ss_pred -------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 835 -------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 835 -------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 112578899999999999999999999 9999999999999999999999999999876433222
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......++..|+|||+..+..++.++|||||||++|||++ |..||....... ..... ...... .. .+
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~---~~~~~~-~~--~~--- 339 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKM---IKEGYR-ML--SP--- 339 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHH---HHhCcc-CC--CC---
Confidence 22223345678999999999999999999999999999998 889986543211 11111 111100 00 01
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.....++.+++.+||+.||++||+++|+++.|++.+
T Consensus 340 ----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~~ 375 (375)
T cd05104 340 ----ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQL 375 (375)
T ss_pred ----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhhC
Confidence 011236889999999999999999999999999764
No 47
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-37 Score=339.47 Aligned_cols=245 Identities=27% Similarity=0.367 Sum_probs=206.0
Q ss_pred CCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
-|+.++-||.|+-|.|..|++ .+|+.+|||++.+.. ......+.+|+.+|+-+.|||++++|+++.+..++|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 367788999999999999985 579999999998763 2223468899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++|-|.+|+.++ +++++.++.++++||+.|+.|+|.. +|+|||+||+|+|+|..+.+||+|||+|....
T Consensus 93 yv~gGELFdylv~k----G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-- 163 (786)
T KOG0588|consen 93 YVPGGELFDYLVRK----GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV-- 163 (786)
T ss_pred ecCCchhHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc--
Confidence 99999999999876 6789999999999999999999999 99999999999999999999999999997542
Q ss_pred CCcccccccccccCccCccccCCCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVA-TYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
....-...+|++.|.|||++.+.+| +.++||||.|||+|.|+||+.||++ +....+...+.+... .++.
T Consensus 164 -~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD---dNir~LLlKV~~G~f--~MPs---- 233 (786)
T KOG0588|consen 164 -PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD---DNIRVLLLKVQRGVF--EMPS---- 233 (786)
T ss_pred -CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC---ccHHHHHHHHHcCcc--cCCC----
Confidence 2344456799999999999999877 5799999999999999999999983 223333333322211 1111
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....+.++|+.+|+..||++|.|++||++
T Consensus 234 --------~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 234 --------NISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred --------cCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 12236789999999999999999999987
No 48
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-38 Score=323.69 Aligned_cols=264 Identities=26% Similarity=0.340 Sum_probs=202.5
Q ss_pred HhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCC--chhhHHHHHHHHHHHHHcCCCccceEeeEEec-----c
Q 035998 739 ESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGD--CGQMEREFRAEVEALSRAQHPNLVHLQGYCMH-----K 810 (1020)
Q Consensus 739 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~ 810 (1020)
+....|...+.||+|+||.|+.|..+ +|+.||||++... .....+...+|++.++.++|+||+.+++++.- -
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 34456777899999999999999854 7899999998733 23345677899999999999999999998865 3
Q ss_pred CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
...|+|+|+|+ .||...++.. ..++.+++..++.|+++||.|+|+. +|+|||+||+|++++.+..+||+|||
T Consensus 99 ~DvYiV~elMe-tDL~~iik~~----~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 99 NDVYLVFELME-TDLHQIIKSQ----QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred ceeEEehhHHh-hHHHHHHHcC----ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccc
Confidence 57899999994 4777777654 4589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccCccCcccc-CCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHH---------
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYG-QASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLIS--------- 960 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~--------- 960 (1020)
+|+...........+.++.|..|+|||++ ....|+.++||||+|||++||++|++-|.+...-.....+.
T Consensus 171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 99987543234455678889999999965 56789999999999999999999999997533211111110
Q ss_pred ---HHH------HHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 961 ---WVI------RMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 961 ---~~~------~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
... .+...... .+..+....+......++++.+|+..||.+|+|++|+++
T Consensus 251 ~l~~i~s~~ar~yi~slp~~----p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQI----PKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHhccHHHHHHHHhCCCC----CCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 00000000 011111111222335789999999999999999999986
No 49
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-38 Score=303.88 Aligned_cols=247 Identities=28% Similarity=0.396 Sum_probs=206.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|.||.||.|+.+ ++-.||+|++.+.. .+.++++.+|+++-+.++||||.++|++|.+....|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 46899999999999999999865 57789999987653 345678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||..+|.+...+.+.. ...+++.....+..|+|.|+.|+|.. +||||||||+|+|++.++..|++|||-+....
T Consensus 102 Eya~~gel~k~L~~~~--~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGR--MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EecCCchHHHHHHhcc--cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 9999999999988542 24578888999999999999999999 99999999999999999999999999987532
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
.......+||..|.|||...+..++..+|+|++|++.||++.|.+||......+... ++.. .+..+|
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYk------rI~k----~~~~~p 242 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYK------RIRK----VDLKFP 242 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHH------HHHH----ccccCC
Confidence 334456789999999999999999999999999999999999999997543221111 1111 111122
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........++|.+|+..+|.+|.+..|+++
T Consensus 243 -------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 243 -------STISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred -------cccChhHHHHHHHHhccCccccccHHHHhh
Confidence 122346789999999999999999999986
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.4e-36 Score=333.53 Aligned_cols=250 Identities=26% Similarity=0.391 Sum_probs=199.8
Q ss_pred CCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 744 FDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|++++++++|++|+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67789999999999999986 478999999986543 12234577899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++|+|..++... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~- 155 (285)
T cd05631 82 MNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG- 155 (285)
T ss_pred cCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-
Confidence 9999998887653 223588999999999999999999999 9999999999999999999999999999865321
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||...........+. .... ... ..
T Consensus 156 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~--~~~~-~~~-~~------ 223 (285)
T cd05631 156 --ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVD--RRVK-EDQ-EE------ 223 (285)
T ss_pred --CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHH--HHhh-ccc-cc------
Confidence 12234578999999999999999999999999999999999999997543322111111 1111 000 00
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPT-----TQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1014 (1020)
........+.+++.+||+.||.+||+ ++++++
T Consensus 224 ---~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 224 ---YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ---CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 11112235789999999999999997 788876
No 51
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=9.7e-37 Score=331.43 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=204.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC----CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP----DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
++|++.+.||+|+||.||+|.++ .+..||+|.++.... ...+.+.+|++.+++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888999999999999999753 356899999886542 3345788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++|+|.+++... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+....
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 85 TEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999998754 24688999999999999999999999 99999999999999999999999999876532
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
... ........++..|+|||...+..++.++||||+||++||+++ |+.||...... +.. ......... .
T Consensus 159 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---~~~---~~~~~~~~~---~ 228 (266)
T cd05064 159 SEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---DVI---KAVEDGFRL---P 228 (266)
T ss_pred ccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHH---HHHHCCCCC---C
Confidence 211 111112344678999999999999999999999999999875 99999754321 111 111111100 0
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.+......+.+++.+||+.+|.+||+++++.+.|++++
T Consensus 229 -------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~~ 266 (266)
T cd05064 229 -------APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKMV 266 (266)
T ss_pred -------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhhC
Confidence 11123346889999999999999999999999998764
No 52
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=337.95 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=211.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCc-eEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKND-RLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 817 (1020)
++|..++++|+|+||.++.++++ +++.||+|++.... ....+..++|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57889999999999999999865 67789999987554 2334578899999999999999999999999988 89999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
+|++||++.+.+.+.. +..++++.+..|+.|++.|+.|||++ +|+|||||+.||+++.++.||++|||+|+....
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999998763 56789999999999999999999988 999999999999999999999999999998865
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
+. ......+||+.||.||.+.+.+|..|+||||+||++|||++-+++|...+.. .++....... .
T Consensus 159 ~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li~ki~~~~--------~-- 223 (426)
T KOG0589|consen 159 ED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELILKINRGL--------Y-- 223 (426)
T ss_pred ch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHHHHHhhcc--------C--
Confidence 43 3456689999999999999999999999999999999999999999754322 2222111111 1
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
.+.+.....++..++..|++.+|+.||++.+++..
T Consensus 224 ---~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 ---SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 11222334578899999999999999999999873
No 53
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.1e-36 Score=334.94 Aligned_cols=264 Identities=22% Similarity=0.297 Sum_probs=198.9
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56899999999999999999865 68899999987543 22334677899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++ +|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LDS-DLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 975 888887653 23578899999999999999999999 99999999999999999999999999997653221
Q ss_pred CcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc---
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL--- 975 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 975 (1020)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+................
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 158 --KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred --ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 12233567899999998765 568999999999999999999999997543222111111100000000001100
Q ss_pred ------CccccC----ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 ------DPFIYD----KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 ------d~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+.... ...+....+..+++.+|+++||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 000111235789999999999999999999985
No 54
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.7e-36 Score=333.63 Aligned_cols=259 Identities=29% Similarity=0.477 Sum_probs=207.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
++|.+.+.||+|+||.||++... ++..+|+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 56888999999999999999742 345689999877655556779999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcC---------CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEE
Q 035998 816 IYSFMENGSLDYWLHEKL---------DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHL 886 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 886 (1020)
||||+++++|.+++.... .....+++..+..++.|++.||+|||++ +++||||||+||++++++.+|+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence 999999999999987542 1223589999999999999999999999 9999999999999999999999
Q ss_pred eeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHH
Q 035998 887 ADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 887 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||....... .. ...
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~---~~i 235 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VI---ECI 235 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HHH
Confidence 99999986543222222233445778999999999999999999999999999998 999986443211 11 111
Q ss_pred HhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 966 RQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
... ..... + . .....+.+++.+||+.||.+|||++++.+.|+++
T Consensus 236 ~~~-~~~~~--~---~----~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 236 TQG-RVLQR--P---R----TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred HcC-CcCCC--C---C----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 111 10000 0 0 1123589999999999999999999999999875
No 55
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.8e-36 Score=332.88 Aligned_cols=259 Identities=31% Similarity=0.500 Sum_probs=207.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCC------CCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPD------GRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 814 (1020)
++|++.+.||+|+||.||+|.... ...||+|.+.... ......+.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 357889999999999999998542 2579999987543 334467899999999999999999999999989999
Q ss_pred EEEEeccCCChhhhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC
Q 035998 815 LIYSFMENGSLDYWLHEKLDG------------PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF 882 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 882 (1020)
++|||+++++|.+++...... ...+++.++..++.|++.||+|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 999999999999999764211 14578899999999999999999999 999999999999999999
Q ss_pred CeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHH
Q 035998 883 GAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISW 961 (1020)
Q Consensus 883 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~ 961 (1020)
.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||...... +...
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~---~~~~- 237 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ---EVIE- 237 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH-
Confidence 999999999986544332233344566788999999988899999999999999999998 99999754322 1111
Q ss_pred HHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 962 VIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 962 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.+.. ..... .+.....++.+++.+||+.||.+||+++|+++.|+.+
T Consensus 238 --~i~~-~~~~~---------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 238 --MIRS-RQLLP---------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred --HHHc-CCcCC---------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1111 11111 1112335688999999999999999999999999863
No 56
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.3e-36 Score=333.44 Aligned_cols=258 Identities=27% Similarity=0.433 Sum_probs=207.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCC------CCEEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEeccCceE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPD------GRNVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 814 (1020)
++|.+.+.||+|+||.||+|+..+ ++.||||.+...... ..+.+.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457888999999999999998643 478999999765443 4578999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhhcC----------CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCe
Q 035998 815 LIYSFMENGSLDYWLHEKL----------DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGA 884 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 884 (1020)
+||||+++++|.+++.... .....+++..+..++.|++.|++|||++ +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999997642 2234578999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHH
Q 035998 885 HLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVI 963 (1020)
Q Consensus 885 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 963 (1020)
|++|||+++...............+++.|+|||++.+..++.++||||+|+++|||++ |..||...... ....
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~---~~~~--- 235 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE---EVIE--- 235 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH---
Confidence 9999999976533222222233456788999999999999999999999999999999 99998644321 1111
Q ss_pred HHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 964 RMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 964 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
... ....... +......+.+++.+||+.||++||++.|+++.|++
T Consensus 236 ~~~-~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 236 CIT-QGRLLQR---------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHH-cCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111 1111110 01122468899999999999999999999999864
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.9e-36 Score=337.28 Aligned_cols=199 Identities=27% Similarity=0.465 Sum_probs=175.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.++|++.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367999999999999999999875 68889999987653 3344678999999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++++|.+++... ..+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKEA----KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 99999999998764 35789999999999999999999852 6999999999999999999999999998765322
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDM 949 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~ 949 (1020)
......|++.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 158 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 22345789999999999999999999999999999999999999964
No 58
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-37 Score=333.20 Aligned_cols=255 Identities=25% Similarity=0.380 Sum_probs=211.5
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC---CC--EEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD---GR--NVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 814 (1020)
.+..+..++||+|-||.||+|.+.+ |. .||||.-+.++ ....+.|.+|+.+|+.++|||||+++|+|.+. ..|
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~W 466 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMW 466 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-cee
Confidence 3445667889999999999998643 33 58999988765 44567899999999999999999999999755 689
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
+|||.++-|-|.+|++.. +..++......++.||..||+|||+. ++|||||..+|||+.....+|++|||+++.
T Consensus 467 ivmEL~~~GELr~yLq~n---k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQN---KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred EEEecccchhHHHHHHhc---cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhh
Confidence 999999999999999875 45788899999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhccccc
Q 035998 895 ILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESE 973 (1020)
Q Consensus 895 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1020)
+.+..... .+...-+..|||||.+.-++++.++|||.|||.|||++. |..||.+....+....++...
T Consensus 541 ~ed~~yYk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGe---------- 609 (974)
T KOG4257|consen 541 LEDDAYYK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGE---------- 609 (974)
T ss_pred ccccchhh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCC----------
Confidence 86543332 223344678999999999999999999999999999998 999998765544332221111
Q ss_pred ccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 974 VLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 974 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.-+.++.++..++.++.+||.+||.+||.+.++...|+++
T Consensus 610 ------RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 610 ------RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred ------CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 1123445566899999999999999999999999998876
No 59
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=318.93 Aligned_cols=263 Identities=27% Similarity=0.406 Sum_probs=200.3
Q ss_pred CCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHH--cCCCccceEeeEEeccC----ceEEEE
Q 035998 744 FDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSR--AQHPNLVHLQGYCMHKN----DRLLIY 817 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~ 817 (1020)
.+..++||+|.||.||+|.+. ++.||||+|... ..+.|.+|.++++. ++|+||++++++-...+ .+++|+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 345678999999999999985 599999999743 35678888888875 48999999999866554 789999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcC------CCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSC------EPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
||.+.|+|.+|++.. .++|....+|+..+++||+|||+.. +++|+|||||.+|||+..|++..|+|||+
T Consensus 288 ~fh~kGsL~dyL~~n-----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKAN-----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeccCCcHHHHHHhc-----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999976 6899999999999999999999754 46899999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCC------CCchhhHHHHHHHHHHHHcCCCCCCCCCCCC-----------
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASV------ATYKGDVYSFGVVLLELLTGKRPMDMCKPKG----------- 954 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlGvil~elltg~~pf~~~~~~~----------- 954 (1020)
|..+............+||.+|||||++.+.. .-.+.||||+|.|+|||++...-++.....+
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 99886443334444589999999999887642 1247999999999999999755442111100
Q ss_pred cccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 955 SRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
....-+...-..+.+.-+.+.+.+... ..+.-+.+.+..||..||+.|.|+.=+-+++.++
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h----~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKH----AGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcC----ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 001111111112222223333333222 3445688999999999999999998888877664
No 60
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-37 Score=322.99 Aligned_cols=259 Identities=26% Similarity=0.346 Sum_probs=197.9
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCc-----eEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKND-----RLLI 816 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~~lv 816 (1020)
.|+..+++|.|+||.||+|... +++.||||+.-.+.. .-.+|+++|++++|||||++.-+|..... ..+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 3566789999999999999864 578999999876533 33579999999999999999988864322 2489
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC-CCeEEeeccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN-FGAHLADFGLARLI 895 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~~~ 895 (1020)
||||+. +|..+++.....+..++...+.-+..||++||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+..
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999976 89999887666667888889999999999999999998 99999999999999976 89999999999987
Q ss_pred cCCCCcccccccccccCccCccccC-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh--ccc-
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQ-ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE--NRE- 971 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~- 971 (1020)
... ....++..|..|+|||.+. ...|+.+.||||.|||+.||+-|++-|.+....+ .+.........+ ..+
T Consensus 177 ~~~---epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~d--QL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 177 VKG---EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVD--QLVEIIKVLGTPTREDIK 251 (364)
T ss_pred ccC---CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHH--HHHHHHHHhCCCCHHHHh
Confidence 543 2234567788999999765 4689999999999999999999999997633221 222222211110 000
Q ss_pred ------ccccCccccC----c-cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 972 ------SEVLDPFIYD----K-QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 972 ------~~~~d~~~~~----~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+...|.+.. . .......+..+++.++++++|.+|.++.|+++
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred hcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 0111111111 1 22333456889999999999999999999986
No 61
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.7e-36 Score=355.73 Aligned_cols=253 Identities=24% Similarity=0.279 Sum_probs=205.5
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-C-CCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-D-GRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
.|.+.+.||+|++|.||+|... + ++.||+|.+..........+.+|+++++.++|||||++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999754 3 6788888876555454566788999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++|+|.+++.........+++.++..++.||+.||+|+|+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999998876544556789999999999999999999999 999999999999999999999999999987643322
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............ .+
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~------~~~~~~~~~~~~-----~~--- 290 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ------REIMQQVLYGKY-----DP--- 290 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCC-----CC---
Confidence 2233456799999999999999999999999999999999999999964321 111111111110 00
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+......+.+++.+||+.||++||+++++++
T Consensus 291 --~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 --FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 00112235889999999999999999999875
No 62
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.7e-36 Score=332.31 Aligned_cols=244 Identities=23% Similarity=0.299 Sum_probs=199.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36889999999999999999865 68999999986432 123456888999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRNS----GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 999999999998764 4688999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
. .....|++.|+|||++.+..++.++||||+||++|||++|+.||...... ... ..+..... ..
T Consensus 154 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~---~~~---~~i~~~~~--~~--- 217 (291)
T cd05612 154 R-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF---GIY---EKILAGKL--EF--- 217 (291)
T ss_pred C-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH---HHHHhCCc--CC---
Confidence 1 12346899999999999999999999999999999999999999753221 111 11111100 00
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPT-----TQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1014 (1020)
+......+.+++.+|++.||.+||+ ++|+++
T Consensus 218 ------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 218 ------PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ------CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 0011235789999999999999995 888876
No 63
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.5e-37 Score=332.30 Aligned_cols=250 Identities=35% Similarity=0.548 Sum_probs=195.0
Q ss_pred cCCeeeccCCeEEEEEEeC-----CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 746 QANIIGCGGFGLVYRATLP-----DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 746 ~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..+.||.|.||.||+|.+. .+..|+||.++.... ...+.+.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3578999999999999876 356799999965433 3467899999999999999999999999988889999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++|+|.+++... ....+++..+..|+.||++||+|||+. +++||||+++||+++.++.+||+|||+++......
T Consensus 83 ~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 83 CPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp -TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999999875 335689999999999999999999999 99999999999999999999999999998763322
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
.............|+|||.+....++.++||||||+++|||++ |+.||..... ............. ..
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~------~~~~~~~~~~~~~-~~---- 226 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN------EEIIEKLKQGQRL-PI---- 226 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH------HHHHHHHHTTEET-TS----
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc------ccccccccccccc-ee----
Confidence 2233334556789999999988889999999999999999999 7888864321 1122222222111 10
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWL 1016 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1016 (1020)
+......+.+++.+||+.||++||+++++++.|
T Consensus 227 -----~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 -----PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -----BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -----ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111224588999999999999999999999986
No 64
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-36 Score=317.08 Aligned_cols=265 Identities=26% Similarity=0.349 Sum_probs=204.9
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCc-cceEeeEEeccC------
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPN-LVHLQGYCMHKN------ 811 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------ 811 (1020)
..|+..++||+|+||+||+|+. .+|+.||+|++..+.. .......+|+.++++++|+| ||.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 3466678899999999999985 4789999999876543 24456789999999999999 999999998877
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..++|+||++. +|..|+.........++...+..++.|++.|++|||++ +|+||||||.||+++.+|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 78899999965 89999887643224567788999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH---Hh
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM---RQ 967 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~---~~ 967 (1020)
|+...-+.. ..+..++|..|+|||++.+. .|+...||||+|||++||++++.-|.+..+ .++.....+. +.
T Consensus 167 Ara~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se---~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 167 ARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE---IDQLFRIFRLLGTPN 241 (323)
T ss_pred HHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH---HHHHHHHHHHcCCCC
Confidence 997653332 24567889999999988776 899999999999999999999999976544 2222222222 11
Q ss_pred hccccccc-Ccccc----Ccc-----C---HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 968 ENRESEVL-DPFIY----DKQ-----H---DKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 968 ~~~~~~~~-d~~~~----~~~-----~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
+..++... -|... ... . +.......+++.+|++++|.+|.|++.+++.
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 12222211 01110 000 0 1111367899999999999999999999874
No 65
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.5e-36 Score=326.38 Aligned_cols=252 Identities=28% Similarity=0.479 Sum_probs=203.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
++|++.+.||+|+||.||+|+++++..+|+|.+.... ...+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4578889999999999999999888899999886543 234678899999999999999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.++.......
T Consensus 83 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05114 83 NGCLLNYLRQRQ---GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY- 155 (256)
T ss_pred CCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce-
Confidence 999999887532 3578999999999999999999999 999999999999999999999999999986533221
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......++..|+|||...+..++.++||||||+++|||++ |+.||...... .. ......... ...+..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~---~~---~~~i~~~~~---~~~~~~- 225 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY---EV---VEMISRGFR---LYRPKL- 225 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH---HH---HHHHHCCCC---CCCCCC-
Confidence 11222345668999999988899999999999999999999 89999643221 11 111111111 011111
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
....+.+++.+||+.+|.+||+++++++.|.
T Consensus 226 ------~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 226 ------ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ------CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1235889999999999999999999999873
No 66
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.6e-36 Score=326.29 Aligned_cols=257 Identities=30% Similarity=0.459 Sum_probs=207.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC----CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP----DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
++|++.+.||+|+||.||+|.++ +...||||.+.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 56889999999999999999874 24579999987554 33446788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++++|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 9999999999998764 23689999999999999999999998 99999999999999999999999999998775
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
............++..|+|||...+..++.++||||||+++|||++ |..||...... ... .........
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~---~~~~~~~~~---- 227 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVI---KAVEDGYRL---- 227 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHH---HHHHcCCCC----
Confidence 2222222223345678999999998899999999999999999998 99998643221 111 111111000
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
+. .......+.+++.+||+.+|++||+++++++.|++++
T Consensus 228 -~~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 228 -PP-----PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred -CC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 00 1112346889999999999999999999999999875
No 67
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.6e-36 Score=328.96 Aligned_cols=257 Identities=30% Similarity=0.437 Sum_probs=210.9
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+..+|++.+.||+|+||.||+|...+++.+|+|.+.........++.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 34568899999999999999999888999999999876654566789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 84 MEKGSLLAFLRSPE--GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred cccCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 99999999997642 34689999999999999999999998 99999999999999999999999999998764322
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
.......++..|+|||......++.++||||||+++|+|++ |+.||......+ .... .......
T Consensus 159 --~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~---~~~~~~~------- 223 (261)
T cd05148 159 --YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQ---ITAGYRM------- 223 (261)
T ss_pred --ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHH---HHhCCcC-------
Confidence 11223345678999999988899999999999999999998 899996543211 1111 1111100
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
..+......+.+++.+||+.||.+|||++++++.|+.+
T Consensus 224 ---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 ---PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 00112234688999999999999999999999999864
No 68
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.2e-36 Score=332.08 Aligned_cols=259 Identities=28% Similarity=0.447 Sum_probs=209.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
.+|.+.+.||+|+||.||+|... ++..+++|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45788899999999999999742 355699999887665556789999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcC------------CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC
Q 035998 816 IYSFMENGSLDYWLHEKL------------DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG 883 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 883 (1020)
||||+++++|.+++.... .....+++..++.++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999997532 1223589999999999999999999999 9999999999999999999
Q ss_pred eEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHH
Q 035998 884 AHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWV 962 (1020)
Q Consensus 884 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~ 962 (1020)
++++|||+++...............++..|+|||+..+..++.++||||||+++|||+| |+.||...... ..+.
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~-- 236 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT---EVIE-- 236 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH--
Confidence 99999999986644332222334556788999999999999999999999999999999 99998654321 1111
Q ss_pred HHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 963 IRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 963 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
... ....... .......+.+++.+||+.+|.+||++++++++|+++
T Consensus 237 -~~~-~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 237 -CIT-QGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred -HHh-CCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 111 1111110 111234688999999999999999999999999875
No 69
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=347.16 Aligned_cols=257 Identities=23% Similarity=0.313 Sum_probs=209.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCCC-CEEEEEEecCCchhhHHHHHHHHHHHHHcC-CCccceEee-EEec------cC
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPDG-RNVAIKRLSGDCGQMEREFRAEVEALSRAQ-HPNLVHLQG-YCMH------KN 811 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~-~~~~------~~ 811 (1020)
..++++.+.|.+|+|+.||.|+...+ ..||+|++........+.+++|+++|++|+ |||||.+++ .... ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 45677889999999999999997655 999999987776777788999999999996 999999999 3322 13
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
+.++.||||+||.|-+++..+...+ +++.++++|+.|+++|+++||.. .++|||||||-+|||++.+++.||||||.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~--lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTR--LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 4679999999999999998876543 99999999999999999999987 77899999999999999999999999999
Q ss_pred cccccCCCCccc-------ccccccccCccCccc---cCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHH
Q 035998 892 ARLILSPYDTHV-------TTDLVGTLGYIPPEY---GQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISW 961 (1020)
Q Consensus 892 ~~~~~~~~~~~~-------~~~~~gt~~y~aPE~---~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~ 961 (1020)
+........... .-....|+-|+|||. ..+..+++|+|||+|||++|-|+....||+......
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la------- 265 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA------- 265 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee-------
Confidence 976543321111 012467899999995 467899999999999999999999999997542211
Q ss_pred HHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 962 VIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 962 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
+++-.+.-+..+.+...+.+||+.||+.||.+||++.+|+..+.+|
T Consensus 266 ------------Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 266 ------------ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred ------------EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence 1111122222345667899999999999999999999999988765
No 70
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.3e-36 Score=326.47 Aligned_cols=256 Identities=27% Similarity=0.402 Sum_probs=207.1
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
.++|++.++||+|+||.||+|...+++.||+|.+..... ..+.+.+|+.++++++|+||+++++++.+.+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 356899999999999999999988888999999875432 3467889999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.++.......
T Consensus 84 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 84 AKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 999999998764 234678899999999999999999998 999999999999999999999999999987643211
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......++..|+|||+..+..++.++||||||+++|+|++ |+.||...... ..... ....... +.
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~---~~~~~~~-----~~- 225 (261)
T cd05072 159 -TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS---DVMSA---LQRGYRM-----PR- 225 (261)
T ss_pred -eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH---HHHHH---HHcCCCC-----CC-
Confidence 11223345678999999988889999999999999999998 99999643221 11111 1111110 00
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.......+.+++.+|++.+|++||+++++.+.|+++
T Consensus 226 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 226 ----MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 011223588999999999999999999999999874
No 71
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.9e-36 Score=342.84 Aligned_cols=263 Identities=25% Similarity=0.403 Sum_probs=207.3
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcC-CCccceEeeEEeccC
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQ-HPNLVHLQGYCMHKN 811 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 811 (1020)
..++|.+.++||+|+||.||+|... .+..||||++..... ...+.+.+|+++++++. ||||++++++|.+..
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3568899999999999999999752 234699999975433 33457889999999996 999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcCC---------------------------------------------------------
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLD--------------------------------------------------------- 834 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 834 (1020)
..++||||+++|+|.+++.....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999998865311
Q ss_pred -----------------------------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc
Q 035998 835 -----------------------------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD 879 (1020)
Q Consensus 835 -----------------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 879 (1020)
....+++..+..++.|+++|++|||+. +|+||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe
Confidence 113478889999999999999999999 999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccH
Q 035998 880 GNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDL 958 (1020)
Q Consensus 880 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~ 958 (1020)
.++.+|++|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||....... ..
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~--~~ 349 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS--TF 349 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH--HH
Confidence 999999999999987643322222233456788999999988899999999999999999997 999986532211 11
Q ss_pred HHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 959 ISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 959 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
. ......... .........+.+++.+||+.||++||++.++.++|++++
T Consensus 350 ~---~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 350 Y---NKIKSGYRM----------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred H---HHHhcCCCC----------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1 111111100 011122346889999999999999999999999999864
No 72
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=307.18 Aligned_cols=251 Identities=25% Similarity=0.332 Sum_probs=201.9
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
+++|++.+.||+|.|+.||++.. ++|+.+|+|++.... ....+++.+|+.+.+.++|||||++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 35688889999999999999864 578999998875432 235678899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc---CCCCeEEeecccccc
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD---GNFGAHLADFGLARL 894 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~ 894 (1020)
|+|+|++|..-+-.+ ...++..+-+.++||++||.|+|.+ +|||||+||+|+++. ...-+|++|||+|..
T Consensus 90 e~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 999999986555433 3567888999999999999999999 999999999999994 344589999999998
Q ss_pred ccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 895 ILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 895 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
+. ........+|||+|||||+....+|+..+|||+.|||+|-++.|.+||.+... .....++..... -
T Consensus 163 l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~------~rlye~I~~g~y---d 230 (355)
T KOG0033|consen 163 VN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYEQIKAGAY---D 230 (355)
T ss_pred eC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH------HHHHHHHhcccc---C
Confidence 85 34556678999999999999999999999999999999999999999974221 111122211111 0
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+++. +-+...+...+++++|+..||.+|.|+.|++.
T Consensus 231 ~~~~----~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 231 YPSP----EWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CCCc----ccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 1111 11223346789999999999999999999885
No 73
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.9e-36 Score=330.82 Aligned_cols=265 Identities=23% Similarity=0.267 Sum_probs=200.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46899999999999999999875 57889999987543 2234567889999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|++++.+..+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEEM----PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 9999877655432 24688999999999999999999999 9999999999999999999999999999876332
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHH---------HHHHhhc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWV---------IRMRQEN 969 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~---------~~~~~~~ 969 (1020)
. ........|++.|+|||++.+..++.++||||+||++|||++|+.||......+....+... .......
T Consensus 154 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 154 S-NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred c-cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 1 11223456899999999998888999999999999999999999999754321111111000 0000000
Q ss_pred ccccccCccccCcc------CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 RESEVLDPFIYDKQ------HDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 ~~~~~~d~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+...... .......+.+++.+|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000001000000 1112346899999999999999999999985
No 74
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.7e-36 Score=340.74 Aligned_cols=252 Identities=22% Similarity=0.305 Sum_probs=203.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999875 588999999975421 23456788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL----GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 999999999998754 4678999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
......|++.|+|||++.+..++.++||||+||++|||++|..||......+ ..................++
T Consensus 154 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~ 225 (333)
T cd05600 154 -----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE---TWENLKYWKETLQRPVYDDP 225 (333)
T ss_pred -----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH---HHHHHHhccccccCCCCCcc
Confidence 2334578999999999999999999999999999999999999997543221 11111111100000111111
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ......+.+++.+|++.+|.+||+++++++
T Consensus 226 ~------~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 226 R------FNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred c------cccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 0 112346789999999999999999999986
No 75
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.3e-36 Score=324.27 Aligned_cols=256 Identities=27% Similarity=0.421 Sum_probs=206.9
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
.++|++.+.||+|++|.||+|...+++.||+|.++.... ..+++.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 457889999999999999999987788999999875432 3567889999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 84 KYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred cCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 9999999987642 34689999999999999999999999 999999999999999999999999999987643211
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
........+..|+|||+..+..++.++||||||+++|||++ |+.||...... ... ......... +
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~---~~~~~~~~~-----~-- 224 (261)
T cd05068 159 -EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA---EVL---QQVDQGYRM-----P-- 224 (261)
T ss_pred -cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHH---HHHHcCCCC-----C--
Confidence 11111223457999999999999999999999999999999 99999643221 111 111111100 0
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
........+.+++.+|++.+|.+||+++++++.|+++
T Consensus 225 ---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 225 ---CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ---CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0111234688999999999999999999999999864
No 76
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-36 Score=313.53 Aligned_cols=252 Identities=23% Similarity=0.283 Sum_probs=205.0
Q ss_pred CCCcCCeeeccCCeEEEEEEeCC-CCEEEEEEecCCchh---hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLPD-GRNVAIKRLSGDCGQ---MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.|+.++.||+|.-|+||+++.++ +..+|+|++.+..-. .......|.++++.++||.++.+|+.|+.++..++|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 46778899999999999999764 589999999876532 23456779999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC-
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS- 897 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~- 897 (1020)
||+||+|....+++ ....++++.++.++..|+.||+|||-. |||+|||||+|||+.++|++.++||.++.....
T Consensus 158 yCpGGdL~~LrqkQ--p~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQ--PGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred cCCCccHHHHHhhC--CCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999888765 456799999999999999999999999 999999999999999999999999999754310
Q ss_pred --------------------------------CCC---------------------cccccccccccCccCccccCCCCC
Q 035998 898 --------------------------------PYD---------------------THVTTDLVGTLGYIPPEYGQASVA 924 (1020)
Q Consensus 898 --------------------------------~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~ 924 (1020)
... .......+||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 000 011224688999999999999999
Q ss_pred CchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCC
Q 035998 925 TYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPK 1004 (1020)
Q Consensus 925 ~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~ 1004 (1020)
+.++|+|+|||++|||+.|..||-+.+..++...+ ..++... ...+.....+.+||++.+.+||.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NI-----v~~~l~F----------p~~~~vs~~akDLIr~LLvKdP~ 377 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNI-----VGQPLKF----------PEEPEVSSAAKDLIRKLLVKDPS 377 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHH-----hcCCCcC----------CCCCcchhHHHHHHHHHhccChh
Confidence 99999999999999999999999876655443222 1111111 11113345689999999999999
Q ss_pred CCCC----HHHHHH
Q 035998 1005 VRPT----TQQLVS 1014 (1020)
Q Consensus 1005 ~RPs----~~evl~ 1014 (1020)
+|.. ++||.+
T Consensus 378 kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 378 KRLGSKRGAAEIKR 391 (459)
T ss_pred hhhccccchHHhhc
Confidence 9998 888765
No 77
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.8e-36 Score=329.00 Aligned_cols=260 Identities=23% Similarity=0.383 Sum_probs=204.5
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCc
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKND 812 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 812 (1020)
.+++|++.+.||+|+||.||+|... ++..||||++.... .....++.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567999999999999999999753 35679999986543 2234568899999999999999999999999999
Q ss_pred eEEEEEeccCCChhhhhhhcCCC------CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEE
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDG------PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHL 886 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 886 (1020)
.++||||+++++|.+++...... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999998754221 23467888999999999999999998 9999999999999999999999
Q ss_pred eeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHH
Q 035998 887 ADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 887 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
+|||+++...............+++.|+|||++.++.++.++|||||||++|||++ |..||...... .... ..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~---~~~~---~~ 234 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE---QVLR---FV 234 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH---HH
Confidence 99999876543222222223345778999999998899999999999999999999 78888643221 1111 11
Q ss_pred HhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 966 RQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
........ +......+.+++.+||+.+|++||++.|+++.|++
T Consensus 235 -~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 -MEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred -HcCCcCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11111110 11122468899999999999999999999999874
No 78
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.5e-36 Score=336.27 Aligned_cols=244 Identities=25% Similarity=0.301 Sum_probs=199.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46889999999999999999875 68899999987542 122356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRKA----GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 999999999988764 4678899999999999999999999 999999999999999999999999999986532
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
. .....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+... .. . -|
T Consensus 171 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~-~~-~--~p 235 (329)
T PTZ00263 171 R-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP------FRIYEKILAG-RL-K--FP 235 (329)
T ss_pred C-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH------HHHHHHHhcC-Cc-C--CC
Confidence 1 1235689999999999999999999999999999999999999964321 1111111111 10 0 01
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPT-----TQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1014 (1020)
. . ....+.+++.+||+.||.+||+ ++++++
T Consensus 236 ~---~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 236 N---W----FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred C---C----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0 0 1135789999999999999997 677764
No 79
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.6e-36 Score=334.12 Aligned_cols=255 Identities=24% Similarity=0.418 Sum_probs=201.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCC----EEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGR----NVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
.+|+..+.||+|+||.||+|++. ++. .||+|++.... ....+++.+|+.+++.++||||++++++|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46899999999999999999864 333 48999987543 34456788999999999999999999998764 5679
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
|+||+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 86 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccc
Confidence 99999999999998764 24578899999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.............++..|+|||...+..++.++||||||+++|||++ |+.||...... ... .........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---~~~---~~~~~~~~~--- 230 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EIS---SILEKGERL--- 230 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHH---HHHhCCCCC---
Confidence 43322222222334678999999999999999999999999999998 99999643211 111 111111110
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
..+ +.+...+.+++.+||+.+|++||++.+++..|.++
T Consensus 231 ~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 231 PQP-------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred CCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011 11223578999999999999999999999988764
No 80
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.9e-36 Score=335.86 Aligned_cols=263 Identities=28% Similarity=0.439 Sum_probs=205.0
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCch-hhHHHHHHHHHHHHHc-CCCccceEeeEEecc-
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCG-QMEREFRAEVEALSRA-QHPNLVHLQGYCMHK- 810 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 810 (1020)
+.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++++ +|+||++++++|...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 3457999999999999999999632 357899999875432 2235678899999999 899999999988754
Q ss_pred CceEEEEEeccCCChhhhhhhcCCC-------------------------------------------------------
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLDG------------------------------------------------------- 835 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~~------------------------------------------------------- 835 (1020)
...+++|||+++++|.+++......
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 5678999999999999998643210
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcccccccccccCc
Q 035998 836 --PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGY 913 (1020)
Q Consensus 836 --~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y 913 (1020)
...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.............++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 13689999999999999999999999 9999999999999999999999999999876433222223334567789
Q ss_pred cCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHH
Q 035998 914 IPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVL 992 (1020)
Q Consensus 914 ~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~ 992 (1020)
+|||++.+..++.++||||+||++|||++ |..||......+ .... ... ...... .+ ......+.
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~~~---~~~-~~~~~~--~~-------~~~~~~~~ 306 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EFCR---RLK-EGTRMR--AP-------EYATPEIY 306 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HHHH---HHh-ccCCCC--CC-------ccCCHHHH
Confidence 99999999999999999999999999998 999996533221 1111 111 110000 01 11224688
Q ss_pred HHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 993 DIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 993 ~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
+++.+||+.+|++||++.|+++.|++++
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999999999864
No 81
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.7e-35 Score=328.27 Aligned_cols=263 Identities=24% Similarity=0.342 Sum_probs=198.7
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999875 688999999875432 223457789999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|++ +++.+++... ...++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 996 5777776643 24578899999999999999999999 9999999999999999999999999998754322
Q ss_pred CCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcc---cc--
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENR---ES-- 972 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~-- 972 (1020)
. .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||....+ ..+............. ..
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 157 S--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD--IQDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred C--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHHhCCCChhhccch
Confidence 1 22234567899999998765 5688999999999999999999999975432 1112221111110000 00
Q ss_pred ---cccCccccCccCH----------HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 ---EVLDPFIYDKQHD----------KEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 ---~~~d~~~~~~~~~----------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...++.......+ .....+.+++.+|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000000000 01135779999999999999999999986
No 82
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8e-36 Score=333.49 Aligned_cols=241 Identities=21% Similarity=0.302 Sum_probs=194.9
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
+.||+|+||.||+|+.+ +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 68999999987542 122345778999999999999999999999999999999999999
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccc
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHV 903 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 903 (1020)
+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~ 151 (323)
T cd05571 81 ELFFHLSRE----RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GAT 151 (323)
T ss_pred cHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCc
Confidence 999888754 4689999999999999999999999 9999999999999999999999999998754221 122
Q ss_pred ccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCcc
Q 035998 904 TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQ 983 (1020)
Q Consensus 904 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 983 (1020)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.... . . +
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~~~~~~-~-~-----~---- 214 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILMEE-I-R-----F---- 214 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH------HHHHHHHHcCC-C-C-----C----
Confidence 3345789999999999999999999999999999999999999964321 11111111110 0 0 0
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 984 HDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 984 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
+......+.+++.+||+.||++|| ++.++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 111223578999999999999999 7998875
No 83
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.2e-36 Score=331.67 Aligned_cols=262 Identities=27% Similarity=0.415 Sum_probs=208.1
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccC
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 811 (1020)
..++|++.+.||+|+||.||+|... ....||+|.+.... ......+.+|+++++++ +|+||+++++++....
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 3457889999999999999999864 23679999987543 23345688999999999 8999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcC------------CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKL------------DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD 879 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 879 (1020)
..+++|||+++|+|..++.... .....+++..++.++.|++.|++|||+. +|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence 9999999999999999987532 2345689999999999999999999998 999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccH
Q 035998 880 GNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDL 958 (1020)
Q Consensus 880 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~ 958 (1020)
+++.+|++|||.++...............++..|+|||+..+..++.++|||||||++|||++ |..||......+ .
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~ 243 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE---L 243 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH---H
Confidence 999999999999987644322222223345678999999988999999999999999999998 999986432211 1
Q ss_pred HHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 959 ISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 959 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
. ........ .. .+......+.+++.+||+.+|.+|||++|+++.|++++
T Consensus 244 ~---~~~~~~~~-~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 244 F---KLLKEGYR-ME---------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred H---HHHHcCCc-CC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1 11111110 00 01112346889999999999999999999999999875
No 84
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-35 Score=331.50 Aligned_cols=200 Identities=25% Similarity=0.457 Sum_probs=174.7
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.++|++.+.||+|+||.||+|... ++..+|+|.+.... ......+.+|++++++++||||++++++|.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999875 68889999887543 2334678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++++|.+++... ..+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 99999999998753 35788999999999999999999741 7999999999999999999999999998765322
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMC 950 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~ 950 (1020)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 158 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 123356889999999999989999999999999999999999999743
No 85
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5e-36 Score=351.42 Aligned_cols=256 Identities=26% Similarity=0.340 Sum_probs=205.3
Q ss_pred hccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC-----
Q 035998 740 STNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN----- 811 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 811 (1020)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+..+..++|+|+++..+.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 346899999999999999999985 478999999986542 233456788999999999999999988775432
Q ss_pred ---ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEee
Q 035998 812 ---DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLAD 888 (1020)
Q Consensus 812 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 888 (1020)
..++||||+++|+|.+++.........+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 25799999999999999987655556789999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh
Q 035998 889 FGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE 968 (1020)
Q Consensus 889 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 968 (1020)
||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~------~~~~~~~~~~ 260 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM------EEVMHKTLAG 260 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhcC
Confidence 9999876443222333456799999999999999999999999999999999999999964321 1111111111
Q ss_pred cccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 NRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. ++ .+......+.+++.+||+.||.+||++.++++
T Consensus 261 -~~----~~-----~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 261 -RY----DP-----LPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred -CC----CC-----CCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 10 01 11112346889999999999999999999986
No 86
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.1e-35 Score=322.58 Aligned_cols=256 Identities=25% Similarity=0.388 Sum_probs=205.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
++|++.+.||+|+||.||+|..+ .++.||+|.+..+.. ...++.+|++++++++||||+++++++......++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch-HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45778899999999999999865 588999999876532 3457889999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++.... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+|++|||.++.......
T Consensus 85 ~~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 85 TYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 9999999987542 34678999999999999999999998 999999999999999999999999999987643211
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......++..|+|||...+..++.++||||||+++|||++ |..||..... .+. ......... ..
T Consensus 160 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~---~~~~~~~~~-~~------ 225 (263)
T cd05052 160 -TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQV---YELLEKGYR-ME------ 225 (263)
T ss_pred -eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHH---HHHHHCCCC-CC------
Confidence 11112234568999999999999999999999999999998 9999864321 111 111111100 00
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.+......+.+++.+||+.+|++||++.++++.|++++
T Consensus 226 ---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 226 ---RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred ---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 01112246889999999999999999999999999874
No 87
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.5e-35 Score=318.73 Aligned_cols=260 Identities=23% Similarity=0.366 Sum_probs=208.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|+.. +++.||||.+.... ......+.+|+++++.++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47899999999999999999864 78999999875422 233456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++.........++++.+..++.|++.||+|||++ +++||||||+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998876544445688999999999999999999999 999999999999999999999999999887533
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
.. .......+++.|+|||...+..++.++|+||+|+++|||++|+.||..... .............. +
T Consensus 159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~------~ 226 (267)
T cd08228 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKIEQCDY------P 226 (267)
T ss_pred hh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHHhcCCC------C
Confidence 21 122235678899999999888899999999999999999999999854221 11111122111111 0
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.. ........+.+++.+||+.+|++||++.++++.|+++
T Consensus 227 ~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 227 PL---PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CC---ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 00 0112234688999999999999999999999999875
No 88
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.7e-35 Score=322.99 Aligned_cols=258 Identities=26% Similarity=0.408 Sum_probs=199.4
Q ss_pred CCcCCeeeccCCeEEEEEEeCCC-C--EEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc------Cc
Q 035998 744 FDQANIIGCGGFGLVYRATLPDG-R--NVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK------ND 812 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~~~-~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 812 (1020)
|.+.+.||+|+||.||+|...+. + .||+|.++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 34678899999999999987543 2 58999887542 33346788899999999999999999987532 24
Q ss_pred eEEEEEeccCCChhhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 813 RLLIYSFMENGSLDYWLHEKL--DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
.+++|||+++|+|..++.... .....+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999998875322 2234589999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
+++...............+++.|+|||...+..++.++||||||+++|||++ |+.||...... .. ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~---~~~~~~~~ 231 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EI---YDYLRQGN 231 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HH---HHHHHcCC
Confidence 9987643222111223345678999999999999999999999999999999 88998643221 11 11111111
Q ss_pred ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 970 RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 970 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.. . . .+.....+.+++.+||+.||++|||+.++++.|++++
T Consensus 232 ~~-~--~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 272 (272)
T cd05075 232 RL-K--Q-------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL 272 (272)
T ss_pred CC-C--C-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 10 0 0 1112235789999999999999999999999999875
No 89
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.8e-36 Score=322.36 Aligned_cols=252 Identities=28% Similarity=0.443 Sum_probs=203.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
++|++.+.||+|+||.||+|++.++..||+|.+.... ....++.+|++++++++||||+++++++.+.+..++||||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4578889999999999999998777789999987543 234678999999999999999999999998888999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++... ...+++..++.++.||+.|++|||+. +++|+||||+||+++.++.+|++|||.++....+..
T Consensus 83 ~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05113 83 NGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY- 155 (256)
T ss_pred CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce-
Confidence 99999998754 23689999999999999999999999 999999999999999999999999999886543221
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......++..|+|||...+..++.++||||||+++|||++ |..||....... ... ........ . .+.
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~---~~~~~~~~-~--~~~-- 224 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVE---KVSQGLRL-Y--RPH-- 224 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH---HHhcCCCC-C--CCC--
Confidence 11122345678999999988889999999999999999999 999986443211 111 11111110 0 000
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
.....+.+++.+||+.+|.+||++.++++.|+
T Consensus 225 -----~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 225 -----LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -----CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11246889999999999999999999998874
No 90
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=8.5e-36 Score=334.54 Aligned_cols=244 Identities=25% Similarity=0.285 Sum_probs=197.9
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCC--CCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPD--GRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
++|++.+.||+|+||.||+|..+. +..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468899999999999999998543 3689999986432 22335678899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 110 ~Ey~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN----KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 9999999999998764 4688999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||....+. .....+.... . . -
T Consensus 183 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------~~~~~i~~~~-~-~--~ 247 (340)
T PTZ00426 183 TR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL------LIYQKILEGI-I-Y--F 247 (340)
T ss_pred CC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH------HHHHHHhcCC-C-C--C
Confidence 21 23457899999999999988999999999999999999999999743221 1111111110 0 0 0
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
| ......+.+++.+|++.||++|+ +++++++
T Consensus 248 p-------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 248 P-------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred C-------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 1 01113477999999999999995 8888876
No 91
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=8.5e-39 Score=345.31 Aligned_cols=371 Identities=27% Similarity=0.409 Sum_probs=299.5
Q ss_pred ceEEEecCCCccc-ccccccccCCCCCcEEecCCCCCCCCCCccccCCCCCCeeeccCCCCCCCCCCccCCCCcceeeec
Q 035998 86 RVTGLFLYKRRLK-GKLSESLGNLVQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLSSNDLSGPLPQTINLPSIQVLDIS 164 (1020)
Q Consensus 86 ~v~~l~l~~~~l~-~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls 164 (1020)
-|.++|+++|.++ +..|.+...++.++.|.|...++. .+|+.++.|.+|++|.+++|++..
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~----------------- 69 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS----------------- 69 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-----------------
Confidence 4556666666666 345666666666666666666665 566666666666666666555542
Q ss_pred cCccCCCCCccccccCCcccEEEccCCCCCCCCCCccccccccccccccccccc-cccchhhhhhcccccccccccccCC
Q 035998 165 SNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLT-GGIADDIFQLQKLRLLGLQDNQLSG 243 (1020)
Q Consensus 165 ~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~ 243 (1020)
+-..++.++.|+.+.+..|++. ..+|..++++..|++||||+|+++
T Consensus 70 --------------------------------vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~- 116 (1255)
T KOG0444|consen 70 --------------------------------VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR- 116 (1255)
T ss_pred --------------------------------hhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-
Confidence 2223445666666677766663 457888999999999999999998
Q ss_pred CCCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCC
Q 035998 244 KLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPA 323 (1020)
Q Consensus 244 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 323 (1020)
..|..+...+++-+|+||+|+|..++-..|.+++.|-+|+|++|++. .+|+.+..+..|+.|+|++|.+.......+..
T Consensus 117 EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPs 195 (1255)
T KOG0444|consen 117 EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPS 195 (1255)
T ss_pred hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCcc
Confidence 78999999999999999999999777778889999999999999998 56777889999999999999998777777888
Q ss_pred CCCcCEEEcCCCccC-CCCCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCcchhhHHHHHhhhcccc
Q 035998 324 LTNLTSLDLGTNKFN-GPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIYNLSSALQVLQQCRNLT 402 (1020)
Q Consensus 324 l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~L~ 402 (1020)
+++|++|.+++.+=+ ..+|.++..+.+|..+|||.|++. .+|+.+-++.+|+.|+||+|+|+.+...
T Consensus 196 mtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~----------- 263 (1255)
T KOG0444|consen 196 MTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMT----------- 263 (1255)
T ss_pred chhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeecc-----------
Confidence 999999999987643 478999999999999999999998 7899999999999999999998765432
Q ss_pred hhhhhccccCCCCCCCccccccCceEEEecccccccccchhhhcCCCCcEEecccccccccccccccCcCcCcEEeCCCC
Q 035998 403 TLVLTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGSIPQWLRGCSKLQLVDLSWNQLSGTIPVWFGGFQDLFYLDLSNN 482 (1020)
Q Consensus 403 ~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 482 (1020)
.+.+.+|++|+||.|+|+ .+|++++.++.|+.|.+.+|
T Consensus 264 -----------------------------------------~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~N 301 (1255)
T KOG0444|consen 264 -----------------------------------------EGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNN 301 (1255)
T ss_pred -----------------------------------------HHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccC
Confidence 234567889999999998 89999999999999999999
Q ss_pred cccccCCCCCCCCcccccccCcCCCCCCCcccceeecccccccccccccCCCCeeecccCccccCCCccccCCCcceEEE
Q 035998 483 TFTGEIPKNLTGLPSLITRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFD 562 (1020)
Q Consensus 483 ~l~~~~p~~~~~l~~L~~l~~s~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~Ls~N~l~~~~~~~~~~L~~L~~L~ 562 (1020)
+++ |. -+|..+|.|.+|+++.
T Consensus 302 kL~------Fe-----------------------------------------------------GiPSGIGKL~~Levf~ 322 (1255)
T KOG0444|consen 302 KLT------FE-----------------------------------------------------GIPSGIGKLIQLEVFH 322 (1255)
T ss_pred ccc------cc-----------------------------------------------------CCccchhhhhhhHHHH
Confidence 886 11 2466788899999999
Q ss_pred ecCCcceeccCccccCCCcccEEEccCCcccccCCccccccccccccccccccccccCCCC
Q 035998 563 LKHNNLSGPIPSELTGMTSLETLDLSYNNLSGAIPISLEKLSFLSKFSVANNHLTGRIPSG 623 (1020)
Q Consensus 563 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~l~ls~N~l~g~~p~~ 623 (1020)
.++|.|. .+|+.++.+..|+.|.|+.|+|- ++|+.+.-|+.|+.|||.+|.=--.+|..
T Consensus 323 aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP 381 (1255)
T KOG0444|consen 323 AANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKP 381 (1255)
T ss_pred hhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCc
Confidence 9999997 89999999999999999999998 89999999999999999999865555553
No 92
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-35 Score=326.89 Aligned_cols=259 Identities=26% Similarity=0.423 Sum_probs=204.6
Q ss_pred CCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
+|++.+.||+|+||.||+|... ....+|+|.+..... ...+.+.+|+++++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999753 235789998875543 334578899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCC--------------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCC
Q 035998 816 IYSFMENGSLDYWLHEKLD--------------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSN 875 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 875 (1020)
++||+.+++|.+++..... ....+++..++.++.|++.|++|||+. +++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 9999999999999865321 123578999999999999999999999 99999999999
Q ss_pred EEEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 035998 876 ILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKG 954 (1020)
Q Consensus 876 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~ 954 (1020)
|++++++.+||+|||+++...............++..|+|||...+..++.++||||||+++|||++ |..||....+.
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 9999999999999999986543322222223345678999999888899999999999999999999 99999643321
Q ss_pred cccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 955 SRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
..... ...... .. .+......+.+++.+||+.+|++||+++|+++.|++++
T Consensus 237 --~~~~~---~~~~~~-~~---------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 237 --RLFNL---LKTGYR-ME---------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred --HHHHH---HhCCCC-CC---------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 11111 111100 00 01112246889999999999999999999999999874
No 93
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.4e-35 Score=325.59 Aligned_cols=258 Identities=27% Similarity=0.432 Sum_probs=204.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-----CCCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-----PDGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
++|++.+.||+|+||.||+|.. .++..||+|.+.... ......+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3578889999999999999974 246789999987543 3334678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC
Q 035998 816 IYSFMENGSLDYWLHEKLD-------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF 882 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 882 (1020)
||||+++++|.+++..... ....+++.++..++.|++.||+|||++ +++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999999864321 123578899999999999999999999 999999999999999999
Q ss_pred CeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHH
Q 035998 883 GAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISW 961 (1020)
Q Consensus 883 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~ 961 (1020)
.+|++|||+++...............++..|+|||+..+..++.++||||||+++|||++ |..||....+. ....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---~~~~- 237 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---EVIE- 237 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHH-
Confidence 999999999987644332223334455678999999988889999999999999999999 99998643221 1111
Q ss_pred HHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 962 VIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 962 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
.... ..... . +......+.+++.+||+.||++||++.++.+.|..
T Consensus 238 --~~~~-~~~~~-----~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 --MVRK-RQLLP-----C----SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHc-CCcCC-----C----CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111 11000 0 01122367899999999999999999999998864
No 94
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-36 Score=313.91 Aligned_cols=266 Identities=29% Similarity=0.386 Sum_probs=208.1
Q ss_pred HHhccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHc--CCCccceEeeEEecc----C
Q 035998 738 LESTNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRA--QHPNLVHLQGYCMHK----N 811 (1020)
Q Consensus 738 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~ 811 (1020)
+...++....+.||+|.||+||+|+|+ |+.||||+|... .++.+.+|.++++.. +|+||..+++.-..+ .
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred HhhhheeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 444567888999999999999999996 899999999753 467788899988764 999999999876543 3
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-----cCCCCeEecCCCCCCEEEcCCCCeEE
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-----SCEPHILHRDIKSSNILLDGNFGAHL 886 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-----~~~~~ivH~Dlkp~NIll~~~~~~kl 886 (1020)
+.++|++|.+.|+|.+|+.+. .++....++++..+|.||+|||. +.+|.|.|||||..|||+..++...|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~-----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN-----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc-----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 678999999999999999975 68899999999999999999995 34688999999999999999999999
Q ss_pred eeccccccccCCCCc--ccccccccccCccCccccCCCCC------CchhhHHHHHHHHHHHHcC----------CCCCC
Q 035998 887 ADFGLARLILSPYDT--HVTTDLVGTLGYIPPEYGQASVA------TYKGDVYSFGVVLLELLTG----------KRPMD 948 (1020)
Q Consensus 887 ~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~------~~~~DvwSlGvil~elltg----------~~pf~ 948 (1020)
+|+|+|....+..+. ......+||.+|||||++....- -..+||||||.|+||++.. +.||.
T Consensus 358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 999999887554221 23345789999999999876432 2369999999999998863 47776
Q ss_pred CCCCCCc-ccHHHHHHHHHhhcccccccCc-cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 949 MCKPKGS-RDLISWVIRMRQENRESEVLDP-FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 949 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
+.-+.+. .+.+..+. +.+.+.| ........+.+..+.++|+.||..+|..|.|+-.+.+.|.++
T Consensus 438 d~Vp~DPs~eeMrkVV-------Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVV-------CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred cCCCCCCCHHHHhcce-------eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 5443322 11111111 1111112 122344567788899999999999999999999998888765
No 95
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.8e-35 Score=323.05 Aligned_cols=258 Identities=28% Similarity=0.441 Sum_probs=203.2
Q ss_pred CCcCCeeeccCCeEEEEEEeCC----CCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCc-----
Q 035998 744 FDQANIIGCGGFGLVYRATLPD----GRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKND----- 812 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 812 (1020)
|++.+.||+|+||.||+|.... +..||+|+++.+. ......+.+|++.+++++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999998642 3679999987543 2334578899999999999999999998876554
Q ss_pred -eEEEEEeccCCChhhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 813 -RLLIYSFMENGSLDYWLHEKL--DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 813 -~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
.+++|||+++|+|..++.... .....+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 689999999999999886542 2234689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhh
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQE 968 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 968 (1020)
|+++...............++..|+|||...+..++.++||||+|+++|||++ |..||...... ... ......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~---~~~~~~ 231 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIY---DYLRHG 231 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHH---HHHHcC
Confidence 99987644332222222345678999999988899999999999999999999 88998653321 111 111111
Q ss_pred cccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 969 NRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 969 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.. .. .+......+.+++.+||+.||.+||++.|+++.|++++
T Consensus 232 ~~-~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~ 273 (273)
T cd05035 232 NR-LK---------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273 (273)
T ss_pred CC-CC---------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 11 00 01122346889999999999999999999999999874
No 96
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.4e-35 Score=319.74 Aligned_cols=249 Identities=24% Similarity=0.362 Sum_probs=196.9
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46899999999999864 78899999876543 33456789999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccc
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
.+++... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++............
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRTE---GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 9998653 24578999999999999999999999 99999999999999999999999999987643211111111
Q ss_pred ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccC
Q 035998 906 DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQH 984 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 984 (1020)
....+..|+|||.+.++.++.++||||+|+++|||++ |..||........ . ........ .. .+
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~---~---~~~~~~~~-~~---------~~ 218 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT---R---EAIEQGVR-LP---------CP 218 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH---H---HHHHcCCC-CC---------Cc
Confidence 1223457999999999899999999999999999998 8888864322111 0 11111000 00 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 985 DKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 985 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
......+.+++.+|++.+|++||+++++.+.|++
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 1123468899999999999999999999999863
No 97
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.5e-36 Score=337.41 Aligned_cols=264 Identities=27% Similarity=0.397 Sum_probs=194.9
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc-----CceE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK-----NDRL 814 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 814 (1020)
+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999864 68999999987432 22335688999999999999999999988643 2479
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
+||||++ ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKAN----DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHhc----ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 6888887653 4589999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCC-cccccccccccCccCccccCC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHH---------H
Q 035998 895 ILSPYD-THVTTDLVGTLGYIPPEYGQA--SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISW---------V 962 (1020)
Q Consensus 895 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~---------~ 962 (1020)
...... ........|++.|+|||++.+ ..++.++||||+||++|||++|+.||...........+.. .
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 532221 112234578999999998765 6789999999999999999999999965332111000000 0
Q ss_pred HHHHhh---cccccc--cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 963 IRMRQE---NRESEV--LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 963 ~~~~~~---~~~~~~--~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...... ...... ..+.......+.....+.+++.+||+.||++||+++|+++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000 000000 0000000000111235789999999999999999999986
No 98
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.3e-35 Score=327.15 Aligned_cols=261 Identities=26% Similarity=0.352 Sum_probs=194.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC--CCCEEEEEEecCCch--hhHHHHHHHHHHHHHc---CCCccceEeeEEec-----
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP--DGRNVAIKRLSGDCG--QMEREFRAEVEALSRA---QHPNLVHLQGYCMH----- 809 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 809 (1020)
.+|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+++++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36899999999999999999863 467899998865431 2234566777777766 69999999999852
Q ss_pred cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 810 KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 810 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
....++||||++ ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 345789999996 58888887542 23578999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHh--
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQ-- 967 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~-- 967 (1020)
|+++..... .......|++.|+|||.+.+..++.++||||+||++|||++|+.||...... +..........
T Consensus 155 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~---~~~~~i~~~~~~~ 228 (290)
T cd07862 155 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV---DQLGKILDVIGLP 228 (290)
T ss_pred cceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH---HHHHHHHHHhCCC
Confidence 999765322 2233456899999999998889999999999999999999999999754332 11211111100
Q ss_pred -hcccc-------cccCccc---cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 968 -ENRES-------EVLDPFI---YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 968 -~~~~~-------~~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..... ....+.. .....+.....+.+++.+|++.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred ChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000 0000000 00001112345779999999999999999999985
No 99
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.1e-35 Score=323.35 Aligned_cols=255 Identities=25% Similarity=0.392 Sum_probs=199.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCC----EEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGR----NVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
++|++.+.||+|+||.||+|.+. +++ .|++|.+..... ....++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46788899999999999999864 344 478888764432 233567888889999999999999998754 45788
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
++||+++|+|.+++... ...+++..+..++.||+.||+|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 86 i~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 99999999999998754 24689999999999999999999998 9999999999999999999999999999875
Q ss_pred cCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.............++..|+|||...++.++.++||||||+++|||++ |+.||......... .........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-------~~~~~~~~~-- 230 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVP-------DLLEKGERL-- 230 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-------HHHHCCCcC--
Confidence 43222222233456778999999988899999999999999999998 99999754322111 111111111
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
..+.. ....+.+++.+||..||++||++.|+++.|..+
T Consensus 231 ~~~~~-------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 231 AQPQI-------CTIDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred CCCCC-------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 11111 123578899999999999999999999998775
No 100
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.9e-35 Score=328.84 Aligned_cols=241 Identities=22% Similarity=0.308 Sum_probs=193.8
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999864 68999999987542 122345678999999999999999999999999999999999999
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccc
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHV 903 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 903 (1020)
+|..++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~ 151 (323)
T cd05595 81 ELFFHLSRE----RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--AT 151 (323)
T ss_pred cHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Cc
Confidence 998888654 4688999999999999999999999 99999999999999999999999999987542221 12
Q ss_pred ccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCcc
Q 035998 904 TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQ 983 (1020)
Q Consensus 904 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 983 (1020)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||...... .. ......... . +
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~---~~~~~~~~~--~-----~---- 214 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RL---FELILMEEI--R-----F---- 214 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH---HH---HHHHhcCCC--C-----C----
Confidence 23456899999999999999999999999999999999999999643221 11 111111100 0 0
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 984 HDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 984 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
+......+.+++.+||+.||++|| ++.++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 011123578999999999999998 8888875
No 101
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.4e-35 Score=325.18 Aligned_cols=261 Identities=23% Similarity=0.376 Sum_probs=207.5
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeCC-----CCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEec-cCc
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLPD-----GRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMH-KND 812 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 812 (1020)
..++|++.+.||+|+||.||+|.+.+ +..||+|++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35678999999999999999998765 6889999987553 2334668899999999999999999998776 467
Q ss_pred eEEEEEeccCCChhhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEee
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDG----PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLAD 888 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 888 (1020)
.++++||+++++|.+++...... +..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 88999999999999998765332 25689999999999999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHh
Q 035998 889 FGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQ 967 (1020)
Q Consensus 889 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 967 (1020)
||+++.+.............++..|+|||+..+..++.++||||+|+++||+++ |+.||....+. + .......
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~---~~~~~~~ 234 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF---E---MAAYLKD 234 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH---H---HHHHHHc
Confidence 999986543221111222345678999999988899999999999999999999 99999753221 1 1111111
Q ss_pred hcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 968 ENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 968 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
..... . .......+.+++.+||+.||++||++.++++.|+++
T Consensus 235 ~~~~~---~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 235 GYRLA---Q-------PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred CCCCC---C-------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11110 0 111224688999999999999999999999999876
No 102
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2e-35 Score=334.73 Aligned_cols=246 Identities=29% Similarity=0.498 Sum_probs=192.6
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
+|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4567889999999999999865 68999999986543 234467899999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|... ...++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 155 ~~~~L~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~- 222 (353)
T PLN00034 155 DGGSLEGT--------HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM- 222 (353)
T ss_pred CCCccccc--------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence 99987543 2345677889999999999999999 99999999999999999999999999998753221
Q ss_pred cccccccccccCccCccccCC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQA-----SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
.......|+..|+|||++.. ...+.++|||||||++|||++|+.||......+ +............ ..
T Consensus 223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~-~~-- 295 (353)
T PLN00034 223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD---WASLMCAICMSQP-PE-- 295 (353)
T ss_pred -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHhccCC-CC--
Confidence 12234578999999998643 345579999999999999999999997332221 1111111111100 00
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........+.+++.+||+.||++||+++|+++
T Consensus 296 -------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 296 -------APATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred -------CCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01112246889999999999999999999987
No 103
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.2e-35 Score=324.05 Aligned_cols=267 Identities=28% Similarity=0.400 Sum_probs=200.9
Q ss_pred CCcCCeeeccCCeEEEEEEe-----CCCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEecc--CceEE
Q 035998 744 FDQANIIGCGGFGLVYRATL-----PDGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDRLL 815 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 815 (1020)
|+..+.||+|+||.||++.+ .+++.||+|.+..... .....+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 38889999999999988653 3578899999876532 3456788999999999999999999988754 35789
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
||||+++++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++..
T Consensus 86 v~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence 99999999999998753 589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcc-cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 896 LSPYDTH-VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 896 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
....... ......++..|+|||...+..++.++||||||+++|||++|..||...... ..+.................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK-FEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-hhhhhcccccccchhhhhhh
Confidence 4322111 112234566799999998888999999999999999999999998643221 00111000000000000000
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.+.......+......+.+++.+||+.+|++||++++++++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 000000111122335688999999999999999999999999876
No 104
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.7e-35 Score=319.87 Aligned_cols=252 Identities=27% Similarity=0.450 Sum_probs=201.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
.+|++.+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 35788899999999999999988778899999865432 24568889999999999999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++... ...++++.+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++...+...
T Consensus 83 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~- 155 (256)
T cd05059 83 NGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY- 155 (256)
T ss_pred CCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc-
Confidence 99999998754 23689999999999999999999999 999999999999999999999999999986543211
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......++..|+|||...+..++.++||||||+++|||++ |+.||......+ .. ......... ..+
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~---~~~~~~~~~---~~~--- 223 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VV---ESVSAGYRL---YRP--- 223 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HH---HHHHcCCcC---CCC---
Confidence 11112223457999999998999999999999999999999 899997543221 11 111111000 001
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
.....++.+++.+||+.+|++||++.|+++.|.
T Consensus 224 ----~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 224 ----KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred ----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 112346889999999999999999999999873
No 105
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-35 Score=328.01 Aligned_cols=261 Identities=26% Similarity=0.383 Sum_probs=206.7
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC--------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEecc
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP--------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHK 810 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 810 (1020)
.++|++.+.||+|+||.||+|++. ++..||+|.+.... ....+.+.+|+++++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456888999999999999999741 34579999987543 23346788999999999 899999999999999
Q ss_pred CceEEEEEeccCCChhhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEE
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLD------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILL 878 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 878 (1020)
...++||||+++|+|.+++..... ....+++.++..++.||+.||+|||++ +++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 999999999999999999976421 123578899999999999999999999 99999999999999
Q ss_pred cCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCccc
Q 035998 879 DGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRD 957 (1020)
Q Consensus 879 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~ 957 (1020)
++++.+|++|||.++...............++..|+|||+..+..++.++||||||+++|||++ |..||.....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----- 245 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 245 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----
Confidence 9999999999999987643322222233445678999999988899999999999999999998 7888864321
Q ss_pred HHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 958 LISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
............. . .+......+.+++.+||+.+|.+||++.|+++.|++++
T Consensus 246 -~~~~~~~~~~~~~-~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 246 -EELFKLLKEGHRM-D---------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred -HHHHHHHHcCCcC-C---------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 1111111111110 0 01122346889999999999999999999999998863
No 106
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.1e-35 Score=323.63 Aligned_cols=258 Identities=29% Similarity=0.441 Sum_probs=205.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
.+|...+.||+|+||.||+|... ++..+|+|.+..........+.+|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46788899999999999999642 356899999887666666789999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCe
Q 035998 816 IYSFMENGSLDYWLHEKLD-----------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGA 884 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 884 (1020)
+|||+++++|.+++..... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999875421 123578999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHH
Q 035998 885 HLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVI 963 (1020)
Q Consensus 885 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 963 (1020)
||+|||+++...............+++.|+|||...+..++.++|||||||++|||++ |..||...... +...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~--- 235 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT---EAIE--- 235 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH---HHHH---
Confidence 9999999976543222122223345678999999998999999999999999999998 99998643321 1111
Q ss_pred HHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 964 RMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 964 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
....... .. .+ ......+.+++.+||+.||.+||+++|+.+.|++
T Consensus 236 ~~~~~~~-~~--~~-------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 236 CITQGRE-LE--RP-------RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHcCcc-CC--CC-------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1111100 00 01 1122357899999999999999999999999874
No 107
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.7e-35 Score=323.42 Aligned_cols=266 Identities=25% Similarity=0.375 Sum_probs=203.9
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC---------------CCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD---------------GRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQ 804 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~ 804 (1020)
.++|++.+.||+|+||.||+++... ...||+|.+.... ......+.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578999999999999999987532 2248999987653 23345789999999999999999999
Q ss_pred eEEeccCceEEEEEeccCCChhhhhhhcC--------CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCE
Q 035998 805 GYCMHKNDRLLIYSFMENGSLDYWLHEKL--------DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNI 876 (1020)
Q Consensus 805 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 876 (1020)
+++......++||||+++++|.+++.... .....+++..+..++.|++.|++|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 99999999999999999999999986531 1112468899999999999999999999 999999999999
Q ss_pred EEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCCC
Q 035998 877 LLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT--GKRPMDMCKPKG 954 (1020)
Q Consensus 877 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--g~~pf~~~~~~~ 954 (1020)
+++.++.+|++|||+++...............++..|+|||+..++.++.++||||||+++|||++ |..||......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~- 239 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE- 239 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH-
Confidence 999999999999999976543222222233455778999999988899999999999999999998 66777643321
Q ss_pred cccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 955 SRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
..+............... ....+.....+.+++.+||+.||++||++++|++.|++
T Consensus 240 --~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 --QVIENTGEFFRNQGRQIY------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred --HHHHHHHHhhhhcccccc------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 122211111111100000 00011122468999999999999999999999999874
No 108
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-35 Score=333.79 Aligned_cols=259 Identities=22% Similarity=0.263 Sum_probs=196.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..+|++.+.||+|+||.||+|... +++.||+|.... ..+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999864 688999997532 3467899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+. ++|..++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 165 ~~-~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 165 YK-TDLYCYLAAK----RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred CC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 95 6787777653 4578999999999999999999999 99999999999999999999999999997543221
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCc----ccHHHHHHHHHhhcccc---
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGS----RDLISWVIRMRQENRES--- 972 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~--- 972 (1020)
........||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+.............
T Consensus 237 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 237 -ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred -ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 1222345799999999999999999999999999999999999988753221110 01111111100000000
Q ss_pred ----------------cccCcccc--CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 ----------------EVLDPFIY--DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 ----------------~~~d~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....+... ..........+.+++.+|++.||++|||++|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000 0001123346889999999999999999999986
No 109
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2e-35 Score=328.71 Aligned_cols=239 Identities=26% Similarity=0.300 Sum_probs=191.7
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 750 IGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999865 57899999986532 22335678899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccc
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~ 151 (312)
T cd05585 81 FHHLQRE----GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD--DDKTN 151 (312)
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC--CCccc
Confidence 9988753 4588999999999999999999999 9999999999999999999999999999754321 12233
Q ss_pred ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 906 DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........... . . . +.
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~------~~~~~~~~~~~-~-~-----~----~~ 214 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV------NEMYRKILQEP-L-R-----F----PD 214 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH------HHHHHHHHcCC-C-C-----C----CC
Confidence 45789999999999999999999999999999999999999974321 11111111110 0 0 0 01
Q ss_pred HHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 035998 986 KEMLRVLDIACLCLSESPKVRPT---TQQLVS 1014 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1014 (1020)
.....+.+++.+||+.||++||+ +.|++.
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 12235789999999999999985 556553
No 110
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.8e-35 Score=323.22 Aligned_cols=251 Identities=27% Similarity=0.375 Sum_probs=200.0
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
+|++.++||+|+||.||++... +++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999864 688999999865421 223456789999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++|+|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999999888653 234689999999999999999999999 9999999999999999999999999999765321
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||......... ........... .
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~-~------ 222 (285)
T cd05605 156 ---ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERRVKEDQ-E------ 222 (285)
T ss_pred ---CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHHhhhcc-c------
Confidence 1223357899999999999889999999999999999999999999753322111 11111111100 0
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
..+......+.+++.+||+.||++|| +++++++
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 223 ---EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ---ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 01111234578999999999999999 8888865
No 111
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=338.27 Aligned_cols=252 Identities=27% Similarity=0.423 Sum_probs=213.1
Q ss_pred CcCCeeeccCCeEEEEEEe-CCC----CEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 745 DQANIIGCGGFGLVYRATL-PDG----RNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~-~~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
...++||.|+||+||+|.| ++| -+||+|++.... .....++.+|+-+|.+++|||+++++++|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 4468899999999999985 343 468999987654 344578999999999999999999999998776 789999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
||+.|.|.+|++.. +..+-.+..+.|..|||+||.|||++ ++|||||.++|||+..-.++||+|||+++....+
T Consensus 778 ~mP~G~LlDyvr~h---r~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREH---RDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred hcccchHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999999985 35677789999999999999999999 9999999999999999999999999999987655
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
..........-.+.|||=|.+....++.++|||||||++||++| |..||+.....+..+..+...+.
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRL------------ 919 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERL------------ 919 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccC------------
Confidence 44443344444678999999999999999999999999999999 99999987766655555432222
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.+++-+..+++.++.+||..|+..||+|+++..++.++
T Consensus 920 ----sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 920 ----SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred ----CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 33455666899999999999999999999999998875
No 112
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.9e-35 Score=322.26 Aligned_cols=266 Identities=24% Similarity=0.364 Sum_probs=204.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-----------------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccce
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-----------------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVH 802 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 802 (1020)
.++|++.+.||+|+||.||+++.. ++..||+|++.... .....++.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 356899999999999999998542 23468999987653 334567899999999999999999
Q ss_pred EeeEEeccCceEEEEEeccCCChhhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCC
Q 035998 803 LQGYCMHKNDRLLIYSFMENGSLDYWLHEKLDG-------PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSN 875 (1020)
Q Consensus 803 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 875 (1020)
+++++...+..++||||+++++|.+++...... ...+++.++..++.|++.|++|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 999999999999999999999999998764321 13477889999999999999999999 99999999999
Q ss_pred EEEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCC
Q 035998 876 ILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT--GKRPMDMCKPK 953 (1020)
Q Consensus 876 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--g~~pf~~~~~~ 953 (1020)
|+++.++.++++|||+++.+.............++..|+|||...++.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 9999999999999999986543222222223345678999998888889999999999999999998 77888643322
Q ss_pred CcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 954 GSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
+ .+.............. ..+ .+..+...+.+++.+||+.||.+||+++++++.|++
T Consensus 241 ~---~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 Q---VIENTGEFFRDQGRQV-YLP-----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred H---HHHHHHHHHhhccccc-cCC-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 1111111111110000 000 011122468899999999999999999999999874
No 113
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.6e-35 Score=324.09 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=206.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCce
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 813 (1020)
.++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+++++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 457889999999999999999864 24689999987553 23345788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhhcCCC------CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEe
Q 035998 814 LLIYSFMENGSLDYWLHEKLDG------PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLA 887 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 887 (1020)
++||||+++++|.+++...... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 9999999999999999764322 23478899999999999999999998 99999999999999999999999
Q ss_pred eccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHH
Q 035998 888 DFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMR 966 (1020)
Q Consensus 888 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 966 (1020)
|||+++...............++..|+|||...++.++.++|||||||++||+++ |..||...... .... ...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~---~~~ 235 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE---EVLK---FVI 235 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH---HHHH---HHh
Confidence 9999987644332222334456789999999988889999999999999999998 99998643221 1111 111
Q ss_pred hhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 967 QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 967 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
........+ .....+.+++.+||+.+|++|||+.++++.|++
T Consensus 236 -~~~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 236 -DGGHLDLPE---------NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred -cCCCCCCCC---------CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111111111 113468899999999999999999999999874
No 114
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.6e-35 Score=322.38 Aligned_cols=259 Identities=29% Similarity=0.442 Sum_probs=203.1
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC------CCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCce
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD------GRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 813 (1020)
+++|++.+.||+|++|.||+|.+.+ +..||+|.+.... ...+..+.+|+.++++++|+||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4678899999999999999998753 5678999887543 33345788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC---CeEEe
Q 035998 814 LLIYSFMENGSLDYWLHEKLD---GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF---GAHLA 887 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~ 887 (1020)
++||||+++++|.+++..... ....+++..+..++.||+.|++|||+. +++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 999999999999999876532 223589999999999999999999999 999999999999998654 59999
Q ss_pred eccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHH
Q 035998 888 DFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMR 966 (1020)
Q Consensus 888 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 966 (1020)
|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||...... .... ...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---~~~~---~~~ 235 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---EVME---FVT 235 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH---HHH
Confidence 9999987632221111122334568999999998899999999999999999997 99999753322 1111 111
Q ss_pred hhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 967 QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 967 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
..... . .+......+.+++.+|++.+|++||++.++++.|+.
T Consensus 236 ~~~~~-~---------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 236 GGGRL-D---------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred cCCcC-C---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 11110 0 011122468899999999999999999999999863
No 115
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-35 Score=328.18 Aligned_cols=260 Identities=27% Similarity=0.392 Sum_probs=204.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC--------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccC
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP--------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 811 (1020)
++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ......+.+|+++++++ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56899999999999999999752 23569999997653 23345688899999999 7999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLD------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD 879 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 879 (1020)
..++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 99999999999999999976422 123588999999999999999999998 999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccH
Q 035998 880 GNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDL 958 (1020)
Q Consensus 880 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~ 958 (1020)
.++.+|++|||.++...............+++.|+|||+..+..++.++||||+||++|||++ |..||...... +
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~---~- 250 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---E- 250 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH---H-
Confidence 999999999999876533211111222334568999999988899999999999999999998 88888643211 1
Q ss_pred HHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 959 ISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 959 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.......... .. .+......+.+++.+||+.+|.+||++.++++.|++++
T Consensus 251 --~~~~~~~~~~-~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 251 --LFKLLKEGHR-MD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred --HHHHHHcCCC-CC---------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 1111111110 00 11122346889999999999999999999999998763
No 116
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.5e-35 Score=322.69 Aligned_cols=266 Identities=26% Similarity=0.389 Sum_probs=207.5
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC-----------------CCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccce
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD-----------------GRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVH 802 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 802 (1020)
..+|++.+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578999999999999999987542 2458999987654 234567889999999999999999
Q ss_pred EeeEEeccCceEEEEEeccCCChhhhhhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCC
Q 035998 803 LQGYCMHKNDRLLIYSFMENGSLDYWLHEKLD-------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSN 875 (1020)
Q Consensus 803 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 875 (1020)
+++++...+..++||||+++++|.+++.+... ....+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 99999999999999999999999999976531 123689999999999999999999999 99999999999
Q ss_pred EEEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCC
Q 035998 876 ILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT--GKRPMDMCKPK 953 (1020)
Q Consensus 876 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--g~~pf~~~~~~ 953 (1020)
|+++.++.++++|||+++...............++..|+|||+..+..++.++||||||+++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD- 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence 9999999999999999987544332233344556788999999888889999999999999999998 6778754322
Q ss_pred CcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 954 GSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
................... .........++.+++.+||+.||.+||+++|++++|++
T Consensus 240 --~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 --QQVIENAGHFFRDDGRQIY------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred --HHHHHHHHhcccccccccc------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1122221111110000000 00111122468999999999999999999999999864
No 117
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.5e-35 Score=325.51 Aligned_cols=257 Identities=25% Similarity=0.395 Sum_probs=203.3
Q ss_pred CCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
+|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4677889999999999999753 357899999976543 234568899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcC------------CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC
Q 035998 816 IYSFMENGSLDYWLHEKL------------DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG 883 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 883 (1020)
++||+++++|..++.... .....+++..+..++.|++.||+|+|+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999985321 1123578889999999999999999999 9999999999999999999
Q ss_pred eEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHH
Q 035998 884 AHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWV 962 (1020)
Q Consensus 884 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~ 962 (1020)
+|++|||+++...............+++.|+|||...++.++.++||||+|+++|||++ |..||...... + ..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~---~~ 236 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---D---VI 236 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---H---HH
Confidence 99999999887643322222334456789999999988889999999999999999998 88888643221 1 11
Q ss_pred HHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 963 IRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 963 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
........ .. .+......+.+++.+||+.+|++||+++++++.|+.
T Consensus 237 ~~i~~~~~-~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 EMIRNRQV-LP---------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHcCCc-CC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11111111 00 011223458899999999999999999999999874
No 118
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.5e-35 Score=334.80 Aligned_cols=263 Identities=25% Similarity=0.392 Sum_probs=206.1
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcC-CCccceEeeEEeccC
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQ-HPNLVHLQGYCMHKN 811 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 811 (1020)
..++|.+.+.||+|+||.||+|++. .++.||||++..... ...+.+.+|++++.++. ||||+++++++...+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3456788899999999999999853 346799999976532 22346889999999997 999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcCC---------------------------------------------------------
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLD--------------------------------------------------------- 834 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 834 (1020)
..++||||+++|+|.+++++...
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999875321
Q ss_pred -------------------------------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEE
Q 035998 835 -------------------------------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNIL 877 (1020)
Q Consensus 835 -------------------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 877 (1020)
....+++..+..++.|++.||+|||+. +++||||||+||+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEE
Confidence 113467888899999999999999998 9999999999999
Q ss_pred EcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcc
Q 035998 878 LDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSR 956 (1020)
Q Consensus 878 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~ 956 (1020)
++.++.+|++|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||......+.
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~- 350 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ- 350 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-
Confidence 99999999999999986533222122223456788999999988889999999999999999998 8999864432111
Q ss_pred cHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 957 DLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
. .......... ..| ......+.+++.+||+.+|.+||+++|+++.|++++
T Consensus 351 --~--~~~~~~~~~~---~~p-------~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 --F--YNAIKRGYRM---AKP-------AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred --H--HHHHHcCCCC---CCC-------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1 1111111000 011 112246889999999999999999999999999874
No 119
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.9e-35 Score=342.62 Aligned_cols=261 Identities=21% Similarity=0.298 Sum_probs=193.9
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEecc--------
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHK-------- 810 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 810 (1020)
...+|++.+.||+|+||.||+|... +++.||||++.... ....+|+.++++++||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999864 68899999886542 2345799999999999999999887432
Q ss_pred CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC-CeEEeec
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF-GAHLADF 889 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Df 889 (1020)
...++||||+++ ++.+++.........+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 135689999975 67777765444456789999999999999999999999 999999999999999665 6999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE 968 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 968 (1020)
|+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|.+||......+ ...........
T Consensus 216 Gla~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~---~~~~i~~~~~~ 289 (440)
T PTZ00036 216 GSAKNLLAG---QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD---QLVRIIQVLGT 289 (440)
T ss_pred ccchhccCC---CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCC
Confidence 999876332 12234578999999998765 468999999999999999999999997543221 11111111000
Q ss_pred cc----------cccccCcc-----ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 NR----------ESEVLDPF-----IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ~~----------~~~~~d~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. .....-+. .....+.....++.+++.+||++||.+|||+.|+++
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00 00000000 000011112346889999999999999999999986
No 120
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.4e-35 Score=331.98 Aligned_cols=241 Identities=21% Similarity=0.317 Sum_probs=194.4
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
+.||+|+||.||+++.. +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 68999999997542 223356788999999999999999999999999999999999999
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccc
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHV 903 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 903 (1020)
+|..++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~ 151 (328)
T cd05593 81 ELFFHLSRE----RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AAT 151 (328)
T ss_pred CHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc--ccc
Confidence 998887653 4688999999999999999999999 9999999999999999999999999998754221 122
Q ss_pred ccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCcc
Q 035998 904 TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQ 983 (1020)
Q Consensus 904 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 983 (1020)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......... . .+
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~------~~~~~~~~~~----~---~~---- 214 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELILMED----I---KF---- 214 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH------HHHHHhccCC----c---cC----
Confidence 23457899999999999999999999999999999999999999643211 1111111100 0 00
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 984 HDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 984 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
+......+.+++.+|++.||++|| ++.++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 215 PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 011123578999999999999997 8898875
No 121
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3e-35 Score=330.65 Aligned_cols=251 Identities=26% Similarity=0.356 Sum_probs=197.9
Q ss_pred CCCcCCeeeccCCeEEEEEEe----CCCCEEEEEEecCCc----hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCce
Q 035998 743 NFDQANIIGCGGFGLVYRATL----PDGRNVAIKRLSGDC----GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 813 (1020)
+|++.+.||+|+||.||+++. .+++.||+|++.... ....+.+.+|+++++++ +||+|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999975 357899999986532 12234577899999999 599999999999999999
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR----DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 9999999999999998754 4688999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 894 LILSPYDTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 894 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
...... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...........+ .......
T Consensus 154 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~--~~~~~~~---- 226 (332)
T cd05614 154 EFLSEE-KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEV--SRRILKC---- 226 (332)
T ss_pred cccccC-CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHH--HHHHhcC----
Confidence 653322 1222345789999999998765 4788999999999999999999999754333222111 1111110
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
++.+. ......+.+++.+||+.||++|| +++++++
T Consensus 227 ---~~~~~----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 227 ---DPPFP----SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ---CCCCC----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11111 11123578999999999999999 7778765
No 122
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.7e-35 Score=324.18 Aligned_cols=261 Identities=24% Similarity=0.391 Sum_probs=204.6
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCc
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKND 812 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 812 (1020)
..++|++.+.||+|+||.||+|..+ .+..||+|.+..... .....+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4568999999999999999999753 245799998865432 233467889999999999999999999999999
Q ss_pred eEEEEEeccCCChhhhhhhcCC------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEE
Q 035998 813 RLLIYSFMENGSLDYWLHEKLD------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHL 886 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 886 (1020)
.++||||+++|+|.+++..... .....++..+..++.|++.|++|||++ +|+||||||+||+++.++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999975321 124457788899999999999999999 9999999999999999999999
Q ss_pred eeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHH
Q 035998 887 ADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 887 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
+|||+++...............++..|+|||...++.++.++|||||||++|||++ |..||...... +.. ...
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~---~~~---~~~ 234 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---QVL---KFV 234 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHH---HHH
Confidence 99999986543222222222345678999999988899999999999999999999 78888643221 111 111
Q ss_pred HhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 966 RQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
..... ... +......+.+++.+|++.||++||++.++++.|++.
T Consensus 235 ~~~~~-~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 235 MDGGY-LDQ---------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HcCCC-CCC---------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 11111 000 011124689999999999999999999999998864
No 123
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.9e-35 Score=324.09 Aligned_cols=259 Identities=30% Similarity=0.485 Sum_probs=205.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCce
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 813 (1020)
.++|++.+.||+|+||.||+|... ++..||+|++.... ....+++.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457899999999999999999853 46789999987653 33456789999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhhcC------------------CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCC
Q 035998 814 LLIYSFMENGSLDYWLHEKL------------------DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSN 875 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 875 (1020)
++||||+++++|.+++.... .....+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 99999999999999997532 1123578899999999999999999998 99999999999
Q ss_pred EEEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 035998 876 ILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKG 954 (1020)
Q Consensus 876 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~ 954 (1020)
|+++.++.++++|||+++................+..|+|||...+..++.++|||||||++|||++ |..||......
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~- 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE- 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999876543222222223345678999999988899999999999999999998 88888643221
Q ss_pred cccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 955 SRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
+ ......... ... .+.....++.+++.+||+.||++||++.|+++.|++
T Consensus 240 --~---~~~~~~~~~-~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 --E---VIYYVRDGN-VLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --H---HHHHHhcCC-CCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1 111111111 100 011122468899999999999999999999999974
No 124
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=9e-35 Score=316.39 Aligned_cols=260 Identities=24% Similarity=0.382 Sum_probs=209.9
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999876 78999999886422 223457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|..++.........++++.+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999876544556789999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
.. .......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ........... ... .+
T Consensus 159 ~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~-~~~----~~ 227 (267)
T cd08224 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEK-CDY----PP 227 (267)
T ss_pred CC--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc----cHHHHHhhhhc-CCC----CC
Confidence 21 112334678899999999888899999999999999999999999854321 11111111111 100 00
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.. .......+.+++.+||+.+|++||++.++++.|+++
T Consensus 228 ~~----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 228 LP----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CC----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 00 112234688999999999999999999999999875
No 125
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4e-35 Score=318.00 Aligned_cols=255 Identities=27% Similarity=0.402 Sum_probs=203.8
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
..+|++.++||+|+||.||+|+..+...||+|++..... ..+.+.+|++++++++||||+++++++. ....++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 356899999999999999999987777899999876432 3457889999999999999999999874 45679999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++|+|.+++... ....++++.+..++.|+++||+|+|+. +++||||||+||++++++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 83 SKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 999999999754 234578999999999999999999999 999999999999999999999999999976543221
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......++..|+|||+..+..++.++||||+|+++|||+| |..||......+ .. .........
T Consensus 158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~---~~---~~~~~~~~~-------- 222 (262)
T cd05071 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VL---DQVERGYRM-------- 222 (262)
T ss_pred -ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH---HH---HHHhcCCCC--------
Confidence 11223345678999999988899999999999999999999 888886433211 11 111111000
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.........+.+++.+|++.+|++||+++++++.|++.
T Consensus 223 --~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 --PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 01122335688999999999999999999999999875
No 126
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7e-35 Score=317.25 Aligned_cols=260 Identities=24% Similarity=0.365 Sum_probs=208.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|+. .+++.||||.+.... .....++.+|+++++.++||||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999985 478999999876432 223457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++.........+++..++.++.|++.|++|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999999876444445789999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
.. .......++..|+|||...+..++.++|+||+|+++|+|++|..||..... +............ .+
T Consensus 159 ~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~------~~ 226 (267)
T cd08229 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCD------YP 226 (267)
T ss_pred CC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc----hHHHHhhhhhcCC------CC
Confidence 21 112234688899999999888999999999999999999999999964321 1111111111100 01
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
... .......+.+++.+||+.||.+|||+.+|++.++++
T Consensus 227 ~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 227 PLP---SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCC---cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 000 112334688999999999999999999999999875
No 127
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.3e-35 Score=317.55 Aligned_cols=253 Identities=26% Similarity=0.431 Sum_probs=203.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
++|++.+.||+|+||.||+|..+++..||+|.+..... ..+.+.+|++++++++|+|++++++++. ....+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46888999999999999999988888999999876433 3457899999999999999999999875 456889999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++... ....++++++..++.|++.|++|||+. +++||||||+||++++++.++++|||.+........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05070 84 KGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc-
Confidence 99999998753 234579999999999999999999999 999999999999999999999999999976543211
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......++..|+|||...+..++.++||||||+++|||++ |..||...... +.. .........
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~---~~~~~~~~~--------- 222 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR---EVL---EQVERGYRM--------- 222 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH---HHH---HHHHcCCCC---------
Confidence 11122345668999999888899999999999999999999 89999643221 111 111111000
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
..+......+.+++.+|++.+|.+|||++++.+.|++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 -PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0011223468899999999999999999999999986
No 128
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.6e-35 Score=326.12 Aligned_cols=241 Identities=26% Similarity=0.349 Sum_probs=193.5
Q ss_pred CeeeccCCeEEEEEEe----CCCCEEEEEEecCCc----hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 748 NIIGCGGFGLVYRATL----PDGRNVAIKRLSGDC----GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+.||+|+||.||+++. .+++.||||++.... ......+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999975 357899999987532 12234577899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 153 (323)
T cd05584 82 LSGGELFMHLERE----GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE- 153 (323)
T ss_pred CCCchHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-
Confidence 9999999988754 4578889999999999999999999 9999999999999999999999999998754322
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
........|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+..... . .
T Consensus 154 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~------~~~~~~~~~~~--~-~---- 219 (323)
T cd05584 154 -GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK------KTIDKILKGKL--N-L---- 219 (323)
T ss_pred -CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH------HHHHHHHcCCC--C-C----
Confidence 12223457899999999999888999999999999999999999999743221 11111111110 0 0
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
+......+.+++.+|++.||++|| +++++++
T Consensus 220 ----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 220 ----PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ----CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 011123578999999999999999 7888765
No 129
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.6e-35 Score=322.97 Aligned_cols=260 Identities=27% Similarity=0.426 Sum_probs=206.2
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCc
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKND 812 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 812 (1020)
.++|.+.+.||+|+||.||+|... ++..||||.++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 356899999999999999999741 34579999987543 23345688999999999 79999999999999999
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLA 892 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 892 (1020)
.++||||+.+|+|.++++... ...+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence 999999999999999987542 23489999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 893 RLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 893 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
+...............++..|+|||.+.+..++.++||||+||++|||++ |..||......+. .. ........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~----~~~~~~~~ 262 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FY----KLIKEGYR 262 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HH----HHHHcCCc
Confidence 86643322222223345678999999998899999999999999999998 9999875432111 11 11111100
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.. ........+.+++.+|++.+|++||++.|+++.|++++
T Consensus 263 ~~---------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~~ 302 (302)
T cd05055 263 MA---------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQL 302 (302)
T ss_pred CC---------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhhC
Confidence 00 00111236889999999999999999999999999864
No 130
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.1e-35 Score=320.30 Aligned_cols=247 Identities=24% Similarity=0.316 Sum_probs=195.7
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 750 IGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
||+|+||+||++... +++.||+|.+..... ...+.+..|++++++++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999864 688999999865432 1234567899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccc
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
..++.........+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.++...... ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--~~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--SKTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCC--cccc
Confidence 988865544456789999999999999999999999 99999999999999999999999999997654322 1223
Q ss_pred ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 906 DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
...|++.|+|||++.+..++.++||||+|+++|||++|+.||.......... ........ . +. ..+.
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~--~~~~~~~~-~-------~~---~~~~ 222 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK--ELKQRILN-D-------SV---TYPD 222 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHH--HHHHhhcc-c-------CC---CCcc
Confidence 4578999999999999999999999999999999999999997533211110 00111100 0 00 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 986 KEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
.....+.+++.+||+.||++|| +++++++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 2234678999999999999999 6777775
No 131
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.1e-35 Score=317.69 Aligned_cols=255 Identities=29% Similarity=0.445 Sum_probs=204.7
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
.++|++.++||+|+||.||+|..++++.||+|.+..... ...++.+|++++++++|+|++++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 457899999999999999999988899999999876543 2457889999999999999999999864 55789999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||.+.......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 156 (260)
T cd05067 83 ENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNE- 156 (260)
T ss_pred CCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCC-
Confidence 999999988654 234688999999999999999999998 99999999999999999999999999997654211
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
........++..|+|||+.....++.++||||||+++|||++ |+.||...... +... ........ ..
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~---~~~~~~~~-~~----- 224 (260)
T cd05067 157 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP---EVIQ---NLERGYRM-PR----- 224 (260)
T ss_pred cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH---HHHH---HHHcCCCC-CC-----
Confidence 111223345678999999988889999999999999999999 99999754321 1111 11111100 00
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
......++.+++.+|++.+|++||+++++++.|+..
T Consensus 225 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 225 ----PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred ----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 011223688999999999999999999999999863
No 132
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5e-35 Score=323.49 Aligned_cols=256 Identities=29% Similarity=0.428 Sum_probs=200.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCC-CC--EEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPD-GR--NVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 816 (1020)
++|++.+.||+|+||.||+|..++ +. .+++|.++... ....+.+.+|+++++++ +||||+++++++.+....++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578899999999999999998653 33 47888887432 33456788999999999 799999999999999999999
Q ss_pred EEeccCCChhhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCe
Q 035998 817 YSFMENGSLDYWLHEKLD------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGA 884 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 884 (1020)
+||+++++|.+++..... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 999999999999875321 123588999999999999999999998 99999999999999999999
Q ss_pred EEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHH
Q 035998 885 HLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVI 963 (1020)
Q Consensus 885 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 963 (1020)
||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||...... ... .
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~---~~~---~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA---ELY---E 229 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHH---H
Confidence 99999998643211 11111233557999999988899999999999999999998 99999643321 111 1
Q ss_pred HHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 964 RMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 964 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
....... .. .+......+.+++.+||+.+|.+||+++++++.|+++
T Consensus 230 ~~~~~~~-~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 230 KLPQGYR-ME---------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred HHhcCCC-CC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111100 00 0111223578999999999999999999999998875
No 133
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.3e-35 Score=321.97 Aligned_cols=263 Identities=25% Similarity=0.385 Sum_probs=201.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-----CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEec--cCceE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-----DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMH--KNDRL 814 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 814 (1020)
.+|++.+.||+|+||.||+|..+ ++..||+|++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888999999999999999742 578999999987665556788999999999999999999998754 34678
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccc
Confidence 999999999999998753 23588999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCccc-ccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC--------c-ccHHHHHHH
Q 035998 895 ILSPYDTHV-TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKG--------S-RDLISWVIR 964 (1020)
Q Consensus 895 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~--------~-~~~~~~~~~ 964 (1020)
......... .....++..|+|||+..+..++.++||||+|+++|||++|..|+......- . .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 643222111 111223456999999988899999999999999999999877754221100 0 000000000
Q ss_pred HHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 965 MRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 965 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
...... ...........+.+++.+||+.+|++|||++|+++.|+.+
T Consensus 238 ~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 238 LLKNNG---------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHhcCC---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 000000 0001112234688999999999999999999999999875
No 134
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=325.61 Aligned_cols=250 Identities=26% Similarity=0.329 Sum_probs=209.2
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC-CCEEEEEEecCCchh---hHHHHHHHHHHHHHcC-CCccceEeeEEeccCceEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD-GRNVAIKRLSGDCGQ---MEREFRAEVEALSRAQ-HPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 815 (1020)
...|++.+.||+|.||.||+++.+. |+.+|+|.+.+.... ....+.+|+++|+++. |||||.++++|.+....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 4578889999999999999998764 999999999876532 3458899999999998 9999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC----CCCeEEeeccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG----NFGAHLADFGL 891 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~Dfg~ 891 (1020)
|||+++||.|.+.+... .+++..+..++.|++.|++|||+. ||+|||+||+|+|+.. ++.+|++|||+
T Consensus 114 vmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 99999999999998876 289999999999999999999998 9999999999999953 35799999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
+..... .......+||+.|+|||++....|+.++||||+||++|.|++|..||......+... .+.....
T Consensus 186 a~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~------~i~~~~~- 255 (382)
T KOG0032|consen 186 AKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL------AILRGDF- 255 (382)
T ss_pred ceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH------HHHcCCC-
Confidence 998743 345566899999999999999999999999999999999999999997654332211 1111111
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+..+..+.....+.++++.|+..||.+|+|+.++++
T Consensus 256 ------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 256 ------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred ------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 1111222333456889999999999999999999987
No 135
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.7e-35 Score=333.69 Aligned_cols=202 Identities=28% Similarity=0.360 Sum_probs=174.6
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++.+++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47899999999999999999864 68899999997542 122346788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMKK----DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 999999999998754 4689999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCc---------------------------------ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCC
Q 035998 898 PYDT---------------------------------HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGK 944 (1020)
Q Consensus 898 ~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~ 944 (1020)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 1100 0012357999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 035998 945 RPMDMC 950 (1020)
Q Consensus 945 ~pf~~~ 950 (1020)
.||...
T Consensus 234 ~Pf~~~ 239 (363)
T cd05628 234 PPFCSE 239 (363)
T ss_pred CCCCCC
Confidence 999753
No 136
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5.9e-35 Score=319.95 Aligned_cols=255 Identities=24% Similarity=0.411 Sum_probs=200.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCC----EEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGR----NVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
++|++.++||+|+||.||+|++. +++ .||+|++.... ....+.+.+|+.+++.++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 56888999999999999999853 444 48999987543 3345678899999999999999999999875 45779
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
++||+++|+|.++++.. ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 ~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 86 VTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred EEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeec
Confidence 99999999999998754 24689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.............++..|+|||...+..++.++|||||||++|||++ |..||...... ....+ .........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~---~~~~~~~~~- 232 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIPDL---LEKGERLPQ- 232 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH---HHCCCcCCC-
Confidence 43222111222344678999999988899999999999999999998 99998643221 11111 111111000
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.......+.+++.+||+.||++||++.++++.|+++
T Consensus 233 ---------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 233 ---------PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred ---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 011224578999999999999999999999988765
No 137
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.8e-35 Score=336.81 Aligned_cols=252 Identities=23% Similarity=0.273 Sum_probs=195.0
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.|+.++.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888999999999999999864 68899999996532 2234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIRM----EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 99999999998764 4578899999999999999999999 9999999999999999999999999997643110
Q ss_pred CCc---------------------------------------------ccccccccccCccCccccCCCCCCchhhHHHH
Q 035998 899 YDT---------------------------------------------HVTTDLVGTLGYIPPEYGQASVATYKGDVYSF 933 (1020)
Q Consensus 899 ~~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl 933 (1020)
... ......+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 000 00123479999999999998899999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhh--ccCCCCCCCCCHHH
Q 035998 934 GVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACL--CLSESPKVRPTTQQ 1011 (1020)
Q Consensus 934 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~e 1011 (1020)
||++|||++|+.||......+. . ..+...........+ .. ...++.+++.+ |+..+|..||+++|
T Consensus 235 G~il~elltG~~Pf~~~~~~~~---~---~~i~~~~~~~~~~~~---~~----~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTET---Q---LKVINWENTLHIPPQ---VK----LSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHH---H---HHHHccccccCCCCC---CC----CCHHHHHHHHHHccCcccccCCCCHHH
Confidence 9999999999999975432111 0 111100000000000 01 11346678877 55566667999999
Q ss_pred HHH
Q 035998 1012 LVS 1014 (1020)
Q Consensus 1012 vl~ 1014 (1020)
+++
T Consensus 302 ~l~ 304 (381)
T cd05626 302 IKA 304 (381)
T ss_pred Hhc
Confidence 986
No 138
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=9.4e-35 Score=317.67 Aligned_cols=245 Identities=27% Similarity=0.390 Sum_probs=192.3
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 750 IGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
||+|+||.||+++.+ +|+.||+|.+.... ....+.+..|++++++++||||+++++++.+....++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999864 68999999986432 12234556799999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccc
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++...... ....
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~ 152 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG---KTIT 152 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC---ceee
Confidence 9888653 234578999999999999999999999 9999999999999999999999999998765332 1223
Q ss_pred ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 906 DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
...|+..|+|||++.+..++.++||||+||++|||++|+.||......... ........... .. .. ..
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~-~~-~~--------~~ 220 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK--EELKRRTLEDE-VK-FE--------HQ 220 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH--HHHHHHhhccc-cc-cc--------cc
Confidence 456889999999998888999999999999999999999999753322111 11111111100 00 00 00
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 986 KEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....++.+++.+||+.||++||+++|+++
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 12235789999999999999999976654
No 139
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.7e-35 Score=317.60 Aligned_cols=257 Identities=26% Similarity=0.456 Sum_probs=204.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CC---CEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DG---RNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
++|+..+.||+|+||.||+|..+ ++ ..+|+|.+.... ....+.+.+|++++++++|||++++.+++.+.+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46788899999999999999864 23 379999987553 33346788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||++....
T Consensus 85 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 85 TEYMENGALDKYLRDH---DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999998753 24689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCcccc-cccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 897 SPYDTHVT-TDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 897 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
........ .....+..|+|||+..++.++.++||||||+++|||++ |+.||...... + ....+......
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~---~---~~~~i~~~~~~--- 229 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH---E---VMKAINDGFRL--- 229 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH---H---HHHHHhcCCCC---
Confidence 32211111 11223457999999988889999999999999999998 99999643221 1 11112111111
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
+. .......+.+++.+||+.+|++||++.++++.|++++
T Consensus 230 --~~-----~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 230 --PA-----PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred --CC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 00 1112346889999999999999999999999999875
No 140
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=7.2e-35 Score=315.13 Aligned_cols=247 Identities=23% Similarity=0.398 Sum_probs=195.9
Q ss_pred eeeccCCeEEEEEEeC---CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 749 IIGCGGFGLVYRATLP---DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 749 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
.||+|+||.||+|.++ ++..||+|+++... ....+++.+|+.+++.++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999653 57889999986543 234567899999999999999999999875 45678999999999
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc-
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH- 902 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~- 902 (1020)
+|.+++... ..++++.+..++.|++.|++|+|++ +|+||||||+||+++.++.+|++|||.++.........
T Consensus 81 ~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQKN----KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 999998653 3588999999999999999999999 99999999999999999999999999998764432211
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccC
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYD 981 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 981 (1020)
......++..|+|||......++.++||||||+++|||++ |+.||...... .. ......... ...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~---~~~i~~~~~-~~~------- 219 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EV---TQMIESGER-MEC------- 219 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HH---HHHHHCCCC-CCC-------
Confidence 1122334578999999888889999999999999999998 99999754322 11 111111111 111
Q ss_pred ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 982 KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 982 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
+......+.+++.+||+.||++||++++|++.|++.
T Consensus 220 --~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 --PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 111224688999999999999999999999999864
No 141
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1e-34 Score=325.35 Aligned_cols=248 Identities=22% Similarity=0.385 Sum_probs=194.7
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
++||+|+||.||+|+.. +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999865 68899999997542 22234577899999888 799999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~ 151 (329)
T cd05588 81 GDLMFHMQRQ----RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--D 151 (329)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCC--C
Confidence 9998887653 4689999999999999999999999 99999999999999999999999999987532221 2
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC--cccHHHHHHHHHhhcccccccCcccc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKG--SRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||+.....+ ......+.......... .. |
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--p--- 225 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-RI--P--- 225 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-CC--C---
Confidence 2334578999999999999999999999999999999999999997433222 11111111111111110 00 0
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCC------HHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPT------TQQLVS 1014 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~ 1014 (1020)
......+.+++.+|++.||.+||+ ++++++
T Consensus 226 ----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 226 ----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 111235789999999999999997 567764
No 142
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.4e-35 Score=324.69 Aligned_cols=256 Identities=32% Similarity=0.465 Sum_probs=200.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCC--EEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGR--NVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 816 (1020)
++|++.+.||+|+||.||+|+++ ++. .+|+|.+.... ....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46788999999999999999864 444 46788776433 23446788999999999 899999999999999999999
Q ss_pred EEeccCCChhhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCe
Q 035998 817 YSFMENGSLDYWLHEKLD------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGA 884 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 884 (1020)
|||+++++|.+++..... ....+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999975421 123678999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHH
Q 035998 885 HLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVI 963 (1020)
Q Consensus 885 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 963 (1020)
||+|||+++.... ........++..|+|||+..+..++.++|||||||++|||+| |..||...... + ...
T Consensus 164 kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~---~~~ 234 (303)
T cd05088 164 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---E---LYE 234 (303)
T ss_pred EeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---H---HHH
Confidence 9999999864311 111112234568999999988889999999999999999998 99999643221 1 111
Q ss_pred HHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 964 RMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 964 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
........ . ........+.+++.+||+.+|++||+++++++.|+++
T Consensus 235 ~~~~~~~~-~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 235 KLPQGYRL-E---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHhcCCcC-C---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111000 0 0001123578999999999999999999999998875
No 143
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.4e-35 Score=334.40 Aligned_cols=252 Identities=26% Similarity=0.330 Sum_probs=202.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46899999999999999999865 68999999987542 123456888999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999998764 4688999999999999999999998 999999999999999999999999999987643
Q ss_pred CC---------------------------CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 035998 898 PY---------------------------DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMC 950 (1020)
Q Consensus 898 ~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~ 950 (1020)
.. .........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 32 001223457899999999999999999999999999999999999999754
Q ss_pred CCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 035998 951 KPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT-TQQLVS 1014 (1020)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 1014 (1020)
... .....+.... .....|.. ......+.+++.+|++ ||.+||+ ++++++
T Consensus 234 ~~~------~~~~~i~~~~--~~~~~p~~-----~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 234 TLQ------ETYNKIINWK--ESLRFPPD-----PPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CHH------HHHHHHhccC--CcccCCCC-----CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 321 1111111100 00000100 0022457899999998 9999999 999986
No 144
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.8e-35 Score=325.64 Aligned_cols=243 Identities=22% Similarity=0.382 Sum_probs=191.0
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 67899999997542 22334577888888777 899999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~ 151 (329)
T cd05618 81 GDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--D 151 (329)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--C
Confidence 9998887653 4689999999999999999999999 99999999999999999999999999987542221 1
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCc--ccHHHHHHHHHhhcccccccCcccc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGS--RDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .....+.......... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~------- 223 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-R------- 223 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-C-------
Confidence 22345789999999999999999999999999999999999999964322211 1111122111111111 0
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTT 1009 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1009 (1020)
.+......+.+++.+||+.||++||++
T Consensus 224 --~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 --IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred --CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 011122357899999999999999984
No 145
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.8e-35 Score=316.36 Aligned_cols=257 Identities=28% Similarity=0.461 Sum_probs=204.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC----CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP----DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
.+|++.+.||+|+||.||+|+.. .+..+|+|.++... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888999999999999999863 23479999987543 23346789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999754 24578999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccc-ccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 897 SPYDTHV-TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 897 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
....... .....++..|+|||...++.++.++|+||||+++||+++ |..||...... +.... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---~~~~~---~~~~~~~--- 228 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---DVIKA---IEEGYRL--- 228 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---HHHHH---HhCCCcC---
Confidence 3221111 111233568999999998899999999999999999887 99999654321 11111 1111100
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
+. .......+.+++.+|++.+|.+||++.++++.|++++
T Consensus 229 --~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 267 (267)
T cd05066 229 --PA-----PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267 (267)
T ss_pred --CC-----CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence 00 1112245789999999999999999999999999875
No 146
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.7e-35 Score=317.94 Aligned_cols=254 Identities=26% Similarity=0.384 Sum_probs=201.2
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
.++|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35789999999999999999986 46889999998765444456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... ..+++..+..++.|++.|++|||+. +|+|||+||+||+++.++.++++|||+++......
T Consensus 88 ~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 88 CGGGSLQDIYHVT----GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred CCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 9999999988653 4678999999999999999999999 99999999999999999999999999998764321
Q ss_pred CcccccccccccCccCccccC---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQ---ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
.......++..|+|||.+. ...++.++||||+||++|||++|+.||....+...... ..... ...
T Consensus 161 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~------~~~~~----~~~ 228 (267)
T cd06646 161 --AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL------MSKSN----FQP 228 (267)
T ss_pred --cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee------eecCC----CCC
Confidence 1123346788999999874 44578899999999999999999999864332211000 00000 000
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
+.... .......+.+++.+||+.+|++||+++++++.
T Consensus 229 ~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 229 PKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred CCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 10000 11122468899999999999999999999874
No 147
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.6e-35 Score=332.36 Aligned_cols=252 Identities=24% Similarity=0.305 Sum_probs=198.3
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47899999999999999999865 68999999997532 223355788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMKK----DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 999999999998754 4689999999999999999999999 999999999999999999999999999876432
Q ss_pred CCCc------------------------------------ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHH
Q 035998 898 PYDT------------------------------------HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELL 941 (1020)
Q Consensus 898 ~~~~------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ell 941 (1020)
.... ......+||+.|+|||++....++.++||||+||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 0011246899999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 035998 942 TGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT---TQQLVS 1014 (1020)
Q Consensus 942 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1014 (1020)
+|..||......+ ................. ......+.+++.+|+. +|.+|++ ++|+++
T Consensus 234 ~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~-------~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 234 VGYPPFCSDNPQE------TYRKIINWKETLQFPDE-------VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred cCCCCCCCCCHHH------HHHHHHcCCCccCCCCC-------CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999997543211 11111110000000000 0112357789999997 9999998 888876
No 148
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-36 Score=328.78 Aligned_cols=248 Identities=25% Similarity=0.377 Sum_probs=205.6
Q ss_pred CcCCeeeccCCeEEEEEEeC--CCC--EEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 745 DQANIIGCGGFGLVYRATLP--DGR--NVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
...++||+|+||.|++|.|+ +|+ .||||.+..+... ...+|.+|+.+|.+|+|||++++||+..+ ....||||.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 45678999999999999985 343 5899999877643 56789999999999999999999999887 677899999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
++.|+|.+.++. .....+-......++.|||.||+||..+ ++||||+.++|+++-....|||+|||+++-++...
T Consensus 192 aplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 192 APLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred cccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 999999999987 3456788888999999999999999999 99999999999999999999999999999887544
Q ss_pred Cccc-ccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 900 DTHV-TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 900 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
+... .....-...|+|||.+....++.++|||+|||++|||+| |..||.+.........+. ..
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD------~~--------- 331 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID------AG--------- 331 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc------cc---------
Confidence 4332 223344568999999999999999999999999999999 899998765432222221 11
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
-.-..+..+.+++++++..||..+|++||+|..+.+
T Consensus 332 -erLpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 332 -ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred -ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 111223446678999999999999999999999975
No 149
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.6e-35 Score=325.14 Aligned_cols=260 Identities=26% Similarity=0.403 Sum_probs=203.7
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC--------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEecc
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP--------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHK 810 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 810 (1020)
.++|.+.+.||+|+||.||+|+.. ....||+|.+.... ......+.+|+++++++ +||||+++++++.+.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 356888999999999999999742 24579999987543 23345688999999999 699999999999998
Q ss_pred CceEEEEEeccCCChhhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEE
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLD------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILL 878 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 878 (1020)
...++||||+++|+|.+++..... ....+++.++..++.|++.||+|||++ +++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEE
Confidence 899999999999999999976421 124588999999999999999999998 99999999999999
Q ss_pred cCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCccc
Q 035998 879 DGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRD 957 (1020)
Q Consensus 879 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~ 957 (1020)
+.++.+|++|||.++...............++..|+|||.+.++.++.++||||||+++|||++ |..||...... +
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~---~ 244 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE---E 244 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH---H
Confidence 9999999999999986643221111222334567999999988899999999999999999999 88998643321 1
Q ss_pred HHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 958 LISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
... .... ..... ........+.+++.+||+.+|++||++.|+++.|+++
T Consensus 245 ~~~---~~~~-~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 245 LFK---LLRE-GHRMD---------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred HHH---HHHc-CCCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 111 1111 11000 0111223678999999999999999999999999875
No 150
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.9e-35 Score=329.25 Aligned_cols=244 Identities=23% Similarity=0.326 Sum_probs=192.5
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHH---HHcCCCccceEeeEEeccCceEEE
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEAL---SRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
|++.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++ +.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 677899999999999999865 68999999997542 12234566666655 456799999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++++|..++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 999999999887754 3689999999999999999999999 99999999999999999999999999987542
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
.. ........|++.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+..... ..
T Consensus 153 ~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~---~~---~~~i~~~~~----~~ 220 (324)
T cd05589 153 GF--GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE---EV---FDSIVNDEV----RY 220 (324)
T ss_pred CC--CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH---HH---HHHHHhCCC----CC
Confidence 21 12233467899999999999999999999999999999999999999743221 11 111111110 00
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
+......+.+++.+||+.||.+|| ++.++++
T Consensus 221 -------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 221 -------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 011123578999999999999999 5666655
No 151
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=7.4e-35 Score=315.92 Aligned_cols=256 Identities=27% Similarity=0.443 Sum_probs=207.0
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..++|++.+.||+|+||.||+|..++++.||||.+..... ..+++.+|++++++++|+|++++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 3467899999999999999999988888999999876533 346788999999999999999999999988899999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||.++......
T Consensus 83 ~~~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 83 MSKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred cCCCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 9999999998764 234689999999999999999999999 99999999999999999999999999988764311
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
.........+..|+|||...+..++.++||||+|+++|||++ |+.||...... ..... ....... ..+
T Consensus 158 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~~---~~~~~~~---~~~- 226 (261)
T cd05034 158 -YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR---EVLEQ---VERGYRM---PRP- 226 (261)
T ss_pred -hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH---HHcCCCC---CCC-
Confidence 111122334568999999998899999999999999999999 99999643221 11111 1111000 000
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
......+.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 ------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 ------PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1112468899999999999999999999999986
No 152
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-34 Score=313.33 Aligned_cols=251 Identities=27% Similarity=0.438 Sum_probs=205.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+.+.+|+.++++++|+||+++++++.+....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 356888999999999999999875 78999999987644 4567889999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++......
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~- 156 (256)
T cd05039 83 AKGSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ- 156 (256)
T ss_pred CCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc-
Confidence 9999999987642 23689999999999999999999999 99999999999999999999999999998763211
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.....+..|+|||+...+.++.++||||+|+++|||++ |..||...... +... .... ......
T Consensus 157 ----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~---~~~~-~~~~~~----- 220 (256)
T cd05039 157 ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVP---HVEK-GYRMEA----- 220 (256)
T ss_pred ----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH---HHhc-CCCCCC-----
Confidence 12334568999999988899999999999999999998 99998643221 1111 1111 100000
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
+......+.+++.+||..+|++||+++|++++|+++
T Consensus 221 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 221 ----PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ----ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 111234688999999999999999999999999864
No 153
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.9e-34 Score=325.04 Aligned_cols=262 Identities=28% Similarity=0.426 Sum_probs=202.5
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe------CCCCEEEEEEecCCch-hhHHHHHHHHHHHHHc-CCCccceEeeEEecc-C
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL------PDGRNVAIKRLSGDCG-QMEREFRAEVEALSRA-QHPNLVHLQGYCMHK-N 811 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 811 (1020)
.++|++.+.||+|+||.||+|.+ .+++.||||++..... .....+.+|++++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35789999999999999999973 3577899999976432 2345688899999999 689999999988654 4
Q ss_pred ceEEEEEeccCCChhhhhhhcCC---------------------------------------------------------
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLD--------------------------------------------------------- 834 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 834 (1020)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 57899999999999999865311
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcccccccc
Q 035998 835 ------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLV 908 (1020)
Q Consensus 835 ------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 908 (1020)
....+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+|++|||+++...............
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 012468888999999999999999999 99999999999999999999999999998754332222222344
Q ss_pred cccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHH
Q 035998 909 GTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKE 987 (1020)
Q Consensus 909 gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 987 (1020)
++..|+|||...+..++.++||||||+++|||++ |..||....... ... ........ .. .|. . .
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~---~~~~~~~~-~~--~~~---~----~ 307 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFC---RRLKEGTR-MR--APD---Y----T 307 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--HHH---HHHhccCC-CC--CCC---C----C
Confidence 5678999999988899999999999999999997 999986532211 111 11111110 00 010 0 1
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 988 MLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 988 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
...+.+++.+||+.||++||++.|+++.|+.++
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 135789999999999999999999999998864
No 154
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-35 Score=291.07 Aligned_cols=250 Identities=26% Similarity=0.395 Sum_probs=201.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--------hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccC
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--------GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 811 (1020)
..|...+.+|+|..+.|.++.++ +|+.+|+|++.... ....++-.+|+.+++++ .||+|+++.+++..+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 45777889999999999988754 68889999875321 12234567899999998 7999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..++|+|.|+.|-|.+|+.+. ..+++.....|++|+.+|++|||.. .|||||+||+|||+|++.++||+|||+
T Consensus 97 F~FlVFdl~prGELFDyLts~----VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSK----VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred hhhhhhhhcccchHHHHhhhh----eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccce
Confidence 999999999999999999875 5789999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCC------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQA------SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
++.+.. .......+|||+|.|||.+.. ..|+..+|+|+.|||||-++.|.+||-.. .++-... +
T Consensus 170 a~~l~~---GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR------kQmlMLR-~ 239 (411)
T KOG0599|consen 170 ACQLEP---GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR------KQMLMLR-M 239 (411)
T ss_pred eeccCC---chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH------HHHHHHH-H
Confidence 998743 344566899999999997654 46788999999999999999999999521 1121111 1
Q ss_pred HhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 966 RQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..++... + ..+...+......++|.+|++.||.+|.|++|+++
T Consensus 240 ImeGkyq-F-----~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 240 IMEGKYQ-F-----RSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHhcccc-c-----CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1221111 1 11122334456889999999999999999999987
No 155
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-35 Score=332.80 Aligned_cols=252 Identities=25% Similarity=0.274 Sum_probs=200.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46889999999999999999864 688999999975432 23456888999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999998764 24689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccccccCccCccccC------CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQ------ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
... .......||+.|+|||++. ...++.++||||+||++|||++|+.||...... .....+......
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~------~~~~~i~~~~~~ 227 (330)
T cd05601 155 NKM-VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA------KTYNNIMNFQRF 227 (330)
T ss_pred CCc-eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH------HHHHHHHcCCCc
Confidence 221 1223357899999999876 456789999999999999999999999643221 111111111111
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....+ .+.....+.+++.+|++ +|.+||+++++++
T Consensus 228 ~~~~~-------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 228 LKFPE-------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cCCCC-------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11110 11122457889999998 9999999999885
No 156
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3e-34 Score=314.24 Aligned_cols=249 Identities=26% Similarity=0.436 Sum_probs=198.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.++||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999985 478899999986543 33446788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
++++++..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 9999986542 357888999999999999999999 9999999999999999999999999999765322
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCccc-HHHHHHHHHhhcccccccCcc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRD-LISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||.......... ............ . +.
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~-----~~ 219 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-P-----PV 219 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-C-----CC
Confidence 2233578899999999999999999999999999999999999997543222111 111111111110 0 00
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. ......++.+++.+|++.+|++||+++|+++
T Consensus 220 ~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 220 LP---VGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred CC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00 0111235789999999999999999999976
No 157
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=8.4e-35 Score=316.96 Aligned_cols=256 Identities=30% Similarity=0.484 Sum_probs=202.8
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CC---CEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DG---RNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
+|++.+.||+|+||.||+|+.. ++ ..||||.+.... ....+++..|++++++++||||+++++++.+....++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 4778899999999999999864 23 369999987643 334567999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++....
T Consensus 85 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 85 EFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred ecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 999999999998754 24578999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccc-c--ccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhccccc
Q 035998 898 PYDTHVTTD-L--VGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESE 973 (1020)
Q Consensus 898 ~~~~~~~~~-~--~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1020)
......... . ..+..|+|||...+..++.++||||+|+++|||++ |..||...... +...+. ........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i---~~~~~~~~ 232 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAI---EQDYRLPP 232 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHH---HcCCcCCC
Confidence 221111111 1 12457999999999999999999999999999987 99999653321 111111 11111000
Q ss_pred ccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 974 VLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 974 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
..+....+.+++.+||+.+|.+||++.++++.|++++
T Consensus 233 ----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 269 (269)
T cd05065 233 ----------PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKMI 269 (269)
T ss_pred ----------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 1112345789999999999999999999999999874
No 158
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.2e-34 Score=346.53 Aligned_cols=261 Identities=25% Similarity=0.340 Sum_probs=202.6
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.++||+|+||.||+|+.. +++.||+|++..+. ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999865 58999999987543 233457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 818 SFMENGSLDYWLHEKLDG-------PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
||++||+|.+++...... ....++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998753211 23456778899999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCC----------------cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 035998 891 LARLILSPYD----------------THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKG 954 (1020)
Q Consensus 891 ~~~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~ 954 (1020)
+++....... .......+||+.|+|||+..+..++.++||||+||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986521110 011123568999999999999999999999999999999999999996522211
Q ss_pred cccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHHHHhc
Q 035998 955 SRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT-TQQLVSWLDSI 1019 (1020)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~i 1019 (1020)
.. .......+.. ..+ .......+.+++.+|++.||++||+ ++++++.|+..
T Consensus 239 ---i~-~~~~i~~P~~----~~p------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 239 ---IS-YRDVILSPIE----VAP------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred ---hh-hhhhccChhh----ccc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 10 0000000000 000 0112235788999999999999974 66677777654
No 159
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.9e-35 Score=330.89 Aligned_cols=241 Identities=22% Similarity=0.315 Sum_probs=193.2
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 68999999997542 122345678999999999999999999999999999999999999
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-cCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-SCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
+|..++... ..+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 ~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--~~ 151 (325)
T cd05594 81 ELFFHLSRE----RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GA 151 (325)
T ss_pred cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCC--Cc
Confidence 998887653 468999999999999999999997 6 9999999999999999999999999998754321 11
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... ....... . . +
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~---~~~---~~i~~~~-~-~-----~--- 215 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLF---ELILMEE-I-R-----F--- 215 (325)
T ss_pred ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH---HHH---HHHhcCC-C-C-----C---
Confidence 223456899999999999999999999999999999999999999643221 111 1111100 0 0 0
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
+......+.+++.+|++.||++|+ +++++++
T Consensus 216 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 216 -PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred -CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 011123578999999999999997 8999875
No 160
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.7e-34 Score=323.11 Aligned_cols=241 Identities=25% Similarity=0.342 Sum_probs=192.1
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCC-ccceEeeEEeccCceEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHP-NLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 817 (1020)
+|++.+.||+|+||.||+|+.+ +++.||||++.... ....+.+..|++++..++|+ +|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788999999999999999865 57889999987542 22335677899999999764 6888999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQV----GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 999999999888754 4578999999999999999999999 999999999999999999999999999875322
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
. ........||+.|+|||++.+..++.++||||+||++|||+||+.||...... ... ..+.... ..
T Consensus 154 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~---~~i~~~~--~~---- 219 (324)
T cd05587 154 G--GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELF---QSIMEHN--VS---- 219 (324)
T ss_pred C--CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHH---HHHHcCC--CC----
Confidence 1 11223457899999999999999999999999999999999999999743221 111 1111110 00
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTT 1009 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1009 (1020)
+ +......+.+++.+|++.||.+|++.
T Consensus 220 -~----~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 220 -Y----PKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -C----CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 0 01112357899999999999999986
No 161
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.4e-34 Score=312.69 Aligned_cols=247 Identities=21% Similarity=0.360 Sum_probs=194.8
Q ss_pred eeccCCeEEEEEEeC---CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 750 IGCGGFGLVYRATLP---DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
||+|+||.||+|.+. .+..||+|++..... ...+.+.+|++++++++||||+++++++. .+..++||||+++++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999753 355799999876532 33467899999999999999999999875 4578999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccc-c
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHV-T 904 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~-~ 904 (1020)
.+++... ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.+|++|||+++.......... .
T Consensus 82 ~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 82 NKFLSGK---KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 9998753 24689999999999999999999999 999999999999999999999999999986543222111 1
Q ss_pred cccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCcc
Q 035998 905 TDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQ 983 (1020)
Q Consensus 905 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 983 (1020)
....++..|+|||....+.++.++||||||+++||+++ |..||......+ .. ........ .. .
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~---~~~~~~~~-~~---------~ 219 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE---VM---SFIEQGKR-LD---------C 219 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH---HH---HHHHCCCC-CC---------C
Confidence 12233578999999988889999999999999999997 999997543221 11 11111111 00 1
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 984 HDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 984 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
+.....++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 112234688999999999999999999999999875
No 162
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.6e-35 Score=327.58 Aligned_cols=236 Identities=27% Similarity=0.387 Sum_probs=189.3
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.+ +++.||||++.... ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 58899999987542 12234567788888776 699999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~i~~~----~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--~~ 151 (320)
T cd05590 81 GDLMFHIQKS----RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--GK 151 (320)
T ss_pred chHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC--CC
Confidence 9999888754 4688999999999999999999999 9999999999999999999999999998754221 12
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+..... ..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---~---~~~~i~~~~~----~~~----- 216 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED---D---LFEAILNDEV----VYP----- 216 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---H---HHHHHhcCCC----CCC-----
Confidence 233457899999999999999999999999999999999999999753321 1 1111111110 011
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTT 1009 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~ 1009 (1020)
......+.+++.+|++.||++||++
T Consensus 217 --~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 217 --TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred --CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 0112357899999999999999998
No 163
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2e-34 Score=313.96 Aligned_cols=255 Identities=24% Similarity=0.352 Sum_probs=193.0
Q ss_pred CeeeccCCeEEEEEEeCC---CCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 748 NIIGCGGFGLVYRATLPD---GRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
+.||+|+||.||+|.+.+ +..+|+|.+..... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998643 45799998876543 33457888999999999999999999999999999999999999
Q ss_pred ChhhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 824 SLDYWLHEKLD-GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 824 ~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
+|.+++..... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999976432 223467778889999999999999999 99999999999999999999999999987543322112
Q ss_pred cccccccccCccCccccCCC-------CCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 903 VTTDLVGTLGYIPPEYGQAS-------VATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
......++..|+|||++.+. .++.++||||||+++|||++ |+.||......+ ..... . .......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~~~~--~--~~~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---VLTYT--V--REQQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---HHHHH--h--hcccCCC
Confidence 22234567889999987542 35789999999999999996 999996543221 11111 1 1111111
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
.++..... ....+.+++..|| .+|++|||++||++.|+
T Consensus 231 ~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLKLP----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccCCC----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 22222111 1234778999999 58999999999999875
No 164
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.3e-34 Score=320.50 Aligned_cols=240 Identities=26% Similarity=0.363 Sum_probs=189.0
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.. +++.||+|+++.... ...+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 578899999875421 2233455666666654 899999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~ 151 (316)
T cd05592 81 GDLMFHIQSS----GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--G 151 (316)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--C
Confidence 9999888754 4688999999999999999999999 99999999999999999999999999997643221 2
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+.... +.+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~---~~---~~~i~~~~-------~~~--- 215 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED---EL---FDSILNDR-------PHF--- 215 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH---HH---HHHHHcCC-------CCC---
Confidence 233457899999999999999999999999999999999999999753321 11 11111110 000
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQ-QLV 1013 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 1013 (1020)
+......+.+++.+||+.||.+||++. +++
T Consensus 216 -~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 216 -PRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred -CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 111123578999999999999999875 443
No 165
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.4e-34 Score=315.21 Aligned_cols=251 Identities=32% Similarity=0.472 Sum_probs=196.3
Q ss_pred CeeeccCCeEEEEEEeCC-CC--EEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLPD-GR--NVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.++ +. .+|+|.++... ....+.+.+|+++++++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999998753 43 46888887543 33446788999999999 799999999999999999999999999
Q ss_pred CChhhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 823 GSLDYWLHEKLD------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 823 g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
|+|.+++..... ....++++++..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999875421 123578999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
+++.... .........+..|+|||+.....++.++||||||+++|||++ |..||...... +. ........
T Consensus 158 l~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~---~~~~~~~~ 228 (270)
T cd05047 158 LSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---EL---YEKLPQGY 228 (270)
T ss_pred Cccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH---HH---HHHHhCCC
Confidence 9863211 111112234567999999988899999999999999999997 99999643211 11 11111111
Q ss_pred ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 970 RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 970 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
.. + ........+.+++.+||+.+|.+||++.++++.|++++
T Consensus 229 ~~-~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 RL-E---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CC-C---------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 10 0 01112235789999999999999999999999999875
No 166
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.5e-34 Score=313.14 Aligned_cols=253 Identities=28% Similarity=0.425 Sum_probs=201.9
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
++|++.+.||+|++|.||+|..+.+..||+|.+.... ...+.+.+|++++++++|||++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4588889999999999999998777789999886543 23466888999999999999999999875 456789999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.++...... .
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~-~ 157 (260)
T cd05069 84 KGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE-Y 157 (260)
T ss_pred CCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc-c
Confidence 99999999764 234578999999999999999999998 99999999999999999999999999997653321 1
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......++..|+|||...+..++.++||||+|+++|||++ |..||....+. .... ........ .
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~---~~~~~~~~---~----- 223 (260)
T cd05069 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR---EVLE---QVERGYRM---P----- 223 (260)
T ss_pred cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH---HHHcCCCC---C-----
Confidence 11122345678999999988899999999999999999999 89999753321 1111 11111000 0
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
.+......+.+++.+||+.||++||++++++++|++
T Consensus 224 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 --CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 011223468899999999999999999999999986
No 167
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.9e-34 Score=310.44 Aligned_cols=247 Identities=25% Similarity=0.385 Sum_probs=198.1
Q ss_pred CeeeccCCeEEEEEEeCCCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCChh
Q 035998 748 NIIGCGGFGLVYRATLPDGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSLD 826 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 826 (1020)
++||+|+||.||+|..++++.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46899999999999988899999999876543 33456889999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcccccc
Q 035998 827 YWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTD 906 (1020)
Q Consensus 827 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 906 (1020)
+++... ...+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++....... ......
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~ 153 (250)
T cd05085 81 SFLRKK---KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI-YSSSGL 153 (250)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccc-cccCCC
Confidence 988653 23578999999999999999999998 99999999999999999999999999987543211 111112
Q ss_pred cccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 907 LVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 907 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
..++..|+|||+..+..++.++||||||+++|++++ |..||....... . .......... . ...
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---~---~~~~~~~~~~-~---------~~~ 217 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---A---REQVEKGYRM-S---------CPQ 217 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH---H---HHHHHcCCCC-C---------CCC
Confidence 234567999999988899999999999999999999 999996442211 1 1111111110 0 011
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 986 KEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
.....+.+++.+|++.+|++||++.|+++.|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 12346889999999999999999999999885
No 168
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.5e-34 Score=313.47 Aligned_cols=251 Identities=28% Similarity=0.473 Sum_probs=204.2
Q ss_pred CeeeccCCeEEEEEEeCC----CCEEEEEEecCCchhh-HHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLPD----GRNVAIKRLSGDCGQM-EREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|.... +..||+|.+....... .+.+.+|++.++.++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998753 7889999998765433 56789999999999999999999999999999999999999
Q ss_pred CChhhhhhhcCCC-----CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 823 GSLDYWLHEKLDG-----PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 823 g~L~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
++|.+++...... ...+++..++.++.|++.|++|||++ +++||||||+||+++.++.+|++|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999998875222 36789999999999999999999998 999999999999999999999999999987754
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
...........++..|+|||......++.++||||+|+++|||++ |..||...... ... ........ ...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~---~~~~~~~~---~~~ 228 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE---EVL---EYLRKGYR---LPK 228 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH---HHH---HHHHcCCC---CCC
Confidence 332233344567889999999988899999999999999999999 69999754221 111 11111110 001
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
+......+.+++.+||+.+|++||++.|+++.|+
T Consensus 229 -------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 229 -------PEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------CccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1112346889999999999999999999999874
No 169
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.2e-35 Score=324.38 Aligned_cols=241 Identities=28% Similarity=0.399 Sum_probs=190.7
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.. +++.||||+++... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999875 57899999987542 12234456677777764 899999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 151 (316)
T cd05619 81 GDLMFHIQSC----HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--DA 151 (316)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCC--CC
Confidence 9999988753 4578899999999999999999999 9999999999999999999999999998753221 12
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... ....... ..|
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~~---~i~~~~~----~~~----- 216 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE---ELFQ---SIRMDNP----CYP----- 216 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH---HHHH---HHHhCCC----CCC-----
Confidence 233457899999999999999999999999999999999999999753221 1111 1111110 001
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHH-HHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQ-QLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 1014 (1020)
......+.+++.+||+.||++||++. ++.+
T Consensus 217 --~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 217 --RWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred --ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 01123578999999999999999997 5543
No 170
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.6e-35 Score=335.74 Aligned_cols=252 Identities=23% Similarity=0.277 Sum_probs=195.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46889999999999999999864 78899999986532 223356788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++....
T Consensus 81 E~~~gg~L~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIKY----DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 999999999988754 4678899999999999999999999 999999999999999999999999999864321
Q ss_pred CCCc---------------------------------------------ccccccccccCccCccccCCCCCCchhhHHH
Q 035998 898 PYDT---------------------------------------------HVTTDLVGTLGYIPPEYGQASVATYKGDVYS 932 (1020)
Q Consensus 898 ~~~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS 932 (1020)
.... .......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 0000 0001246899999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCC---CCH
Q 035998 933 FGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVR---PTT 1009 (1020)
Q Consensus 933 lGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~ 1009 (1020)
+||++|||++|..||...... ... ..+..........+ .......+.+++.+|++ +|.+| +++
T Consensus 234 lGvil~elltG~~Pf~~~~~~---~~~---~~i~~~~~~~~~p~-------~~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSH---ETY---RKIINWRETLYFPD-------DIHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHH---HHH---HHHHccCCccCCCC-------CCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 999999999999999643321 111 11111000000000 00112357889999998 66665 599
Q ss_pred HHHHH
Q 035998 1010 QQLVS 1014 (1020)
Q Consensus 1010 ~evl~ 1014 (1020)
.|+++
T Consensus 300 ~~~l~ 304 (377)
T cd05629 300 HEIKS 304 (377)
T ss_pred HHHhc
Confidence 99876
No 171
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.7e-34 Score=329.46 Aligned_cols=263 Identities=25% Similarity=0.321 Sum_probs=196.0
Q ss_pred CCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC-----ceE
Q 035998 743 NFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN-----DRL 814 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 814 (1020)
+|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999986 478999999986532 223457889999999999999999999998766 789
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
+||||+. ++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP----QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999997 4677666542 4689999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHH-----------
Q 035998 895 ILSPYDTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWV----------- 962 (1020)
Q Consensus 895 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~----------- 962 (1020)
.... .........+++.|+|||++.+. .++.++||||+||++|||++|+.||....+......+...
T Consensus 153 ~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 153 EEPD-ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred cccC-ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 5322 12222345678899999988764 5789999999999999999999999754322111111000
Q ss_pred -HHHHhhcccccccCc-cc--cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 963 -IRMRQENRESEVLDP-FI--YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 963 -~~~~~~~~~~~~~d~-~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..............+ .. ...........+.+++.+|++.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 000000000000000 00 00001112346789999999999999999999986
No 172
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9.2e-35 Score=323.29 Aligned_cols=264 Identities=21% Similarity=0.299 Sum_probs=197.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|.+.+.||+|+||.||+|+.+ +++.||+|.+..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56899999999999999999865 678899999875432 2234577899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++ ++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 975 787777653 24578899999999999999999999 99999999999999999999999999997653322
Q ss_pred CcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc---
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL--- 975 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 975 (1020)
.......+++.|+|||++.+ ..++.++||||+||++|||+||+.||......+....+................
T Consensus 159 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 159 --KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred --cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 12233467889999998754 568999999999999999999999997543322111111100000000000000
Q ss_pred ------Ccccc----CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 ------DPFIY----DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 ------d~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+... ....+.....+.+++.+|++.||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000 0000112335789999999999999999999987
No 173
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.1e-34 Score=329.79 Aligned_cols=253 Identities=23% Similarity=0.260 Sum_probs=199.3
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3467899999999999999999865 68899999986432 1223457789999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 121 v~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 99999999999988653 478888999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCcccccccccccCccCccccCCC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQAS----VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
.... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+......
T Consensus 193 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~~~ 265 (370)
T cd05596 193 DANG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMDHKNS 265 (370)
T ss_pred cCCC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH------HHHHHHHcCCCc
Confidence 3321 1122345789999999987653 4788999999999999999999999753321 111111111100
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKV--RPTTQQLVS 1014 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1014 (1020)
....+ .......+.+++.+|++.+|.+ ||+++|+++
T Consensus 266 ~~~~~-------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 266 LTFPD-------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCCC-------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 01010 0112246789999999999988 999999976
No 174
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4e-35 Score=336.01 Aligned_cols=251 Identities=24% Similarity=0.278 Sum_probs=193.5
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
+|+.++.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999864 68899999987542 2234568889999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++|+|.+++.+. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIRM----GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 99999999988754 4578889999999999999999999 9999999999999999999999999997532110
Q ss_pred CC---------------------------------------------cccccccccccCccCccccCCCCCCchhhHHHH
Q 035998 899 YD---------------------------------------------THVTTDLVGTLGYIPPEYGQASVATYKGDVYSF 933 (1020)
Q Consensus 899 ~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl 933 (1020)
.. ........||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 00 000123468999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC---HH
Q 035998 934 GVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT---TQ 1010 (1020)
Q Consensus 934 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ 1010 (1020)
||++|||++|+.||....+.+. ......... ....|. .... ...+.+++.+|+ .+|++|++ ++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~------~~~i~~~~~--~~~~p~-~~~~----s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLET------QMKVINWQT--SLHIPP-QAKL----SPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHHH------HHHHHccCC--CcCCCC-cccC----CHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 9999999999999975432111 111111000 000000 0011 124567777765 49999997 88
Q ss_pred HHHH
Q 035998 1011 QLVS 1014 (1020)
Q Consensus 1011 evl~ 1014 (1020)
++++
T Consensus 301 ei~~ 304 (382)
T cd05625 301 EIKA 304 (382)
T ss_pred HHhc
Confidence 8765
No 175
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.6e-34 Score=322.77 Aligned_cols=241 Identities=26% Similarity=0.356 Sum_probs=192.6
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999865 57899999987542 12234567788888876 799999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~ 151 (321)
T cd05591 81 GDLMFQIQRS----RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--V 151 (321)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC--c
Confidence 9999888654 4688999999999999999999999 99999999999999999999999999987643221 2
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...... ... ..+..... ..|
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~---~~~---~~i~~~~~----~~p----- 216 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED---DLF---ESILHDDV----LYP----- 216 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH---HHH---HHHHcCCC----CCC-----
Confidence 233456899999999999999999999999999999999999999754321 111 11111110 011
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCC-------CHHHHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRP-------TTQQLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~ 1014 (1020)
......+.+++.+|++.||++|| +++++++
T Consensus 217 --~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 217 --VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred --CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 01123578999999999999999 7777765
No 176
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.9e-34 Score=322.87 Aligned_cols=243 Identities=22% Similarity=0.361 Sum_probs=192.4
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++.++ +||+|+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999864 578999999976432 2234577899998888 699999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~ 151 (327)
T cd05617 81 GDLMFHMQRQ----RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--D 151 (327)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--C
Confidence 9998887653 4689999999999999999999999 99999999999999999999999999987532221 2
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.............+........... .|
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~p----- 223 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR---IP----- 223 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC---CC-----
Confidence 2334678999999999999999999999999999999999999997543332222222222221111110 01
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTT 1009 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~ 1009 (1020)
......+.+++.+|++.||++||++
T Consensus 224 --~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 224 --RFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred --CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 0112357899999999999999985
No 177
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-37 Score=303.82 Aligned_cols=247 Identities=25% Similarity=0.389 Sum_probs=208.6
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
|++.+++|+|+||.||+|.++ +|+.||||++..+ .+.+++..|+.+|++.+.|++|++||.+......|+|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 677889999999999999865 6999999998755 3467889999999999999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+..+.++-+ ..+++++++..++++-+.||+|||.. .-||||||+.|||++.+|.+|++|||.+..+.+.. .
T Consensus 113 GSiSDI~R~R---~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM--A 184 (502)
T KOG0574|consen 113 GSISDIMRAR---RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM--A 184 (502)
T ss_pred CcHHHHHHHh---cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH--H
Confidence 9999998765 35799999999999999999999998 88999999999999999999999999998775432 3
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......||+.|||||++..-.|..++||||+|+...||..|++||.+..+-.. ..+....+.+.+..
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-------IFMIPT~PPPTF~K------ 251 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-------IFMIPTKPPPTFKK------ 251 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-------eEeccCCCCCCCCC------
Confidence 34568999999999999999999999999999999999999999986544221 11111122222222
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+.....++.++++.|+-..|++|-|+.++++
T Consensus 252 -PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 252 -PEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred -hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 3334457899999999999999999999876
No 178
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-34 Score=330.68 Aligned_cols=261 Identities=24% Similarity=0.281 Sum_probs=200.5
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC---CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP---DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
..+|++.+.||+|+||.||++... .+..||+|.+... +...+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 3578999988653 23568999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
|++. ++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 166 e~~~-~~l~~~l~~----~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 166 PKYK-CDLFTYVDR----SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred hhcC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 9996 578777743 25689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccc----
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESE---- 973 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---- 973 (1020)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||...........+..............
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 317 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG 317 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence 3333333446789999999999999999999999999999999999999976544332222222111111000000
Q ss_pred -------------ccCcccc-Ccc--CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 974 -------------VLDPFIY-DKQ--HDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 974 -------------~~d~~~~-~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...+... ... .......+.+++.+|++.||++||++.|+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000 000 0011235778999999999999999999987
No 179
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.6e-34 Score=312.22 Aligned_cols=249 Identities=27% Similarity=0.413 Sum_probs=200.3
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEe-ccCceEEEEEec
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCM-HKNDRLLIYSFM 820 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 820 (1020)
++|++.+.||+|+||.||+|..+ ++.||+|.+..+. ..+.+.+|+.++++++|+|++++++++. +....++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888999999999999999874 7889999987543 2457889999999999999999999765 456789999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++... ....+++..+..++.|++.|++|||++ +++||||||+||++++++.+|++|||+++......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 83 AKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 999999998764 234578999999999999999999999 99999999999999999999999999987643221
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
....++..|+|||+..+..++.++||||+|+++|||++ |+.||..... ........... ...
T Consensus 157 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~------~~~~~~~~~~~-~~~------ 219 (256)
T cd05082 157 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL------KDVVPRVEKGY-KMD------ 219 (256)
T ss_pred ----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhcCC-CCC------
Confidence 22344568999999998899999999999999999998 9999864321 11111111110 001
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
........+.+++.+||+.+|++|||++++++.|+++
T Consensus 220 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 220 ---APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0112234688999999999999999999999999875
No 180
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6.1e-34 Score=309.08 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=200.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-----hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-----QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
++|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46889999999999999999854 689999999864321 123468889999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
|+||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.++..
T Consensus 82 v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY----GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 99999999999988754 4578899999999999999999999 9999999999999999999999999999765
Q ss_pred cCCCCcc-cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 896 LSPYDTH-VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 896 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
....... ......++..|+|||...+..++.++||||+|+++|||++|+.||...... ..............
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~- 227 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM------AAIFKIATQPTNPQ- 227 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH------HHHHHHhccCCCCC-
Confidence 3221111 112345778999999999989999999999999999999999999643211 11111111111000
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
.+......+.+++.+||+.+|.+||++.++++.
T Consensus 228 --------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 228 --------LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --------CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 111223467899999999999999999999863
No 181
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.1e-35 Score=336.33 Aligned_cols=252 Identities=23% Similarity=0.275 Sum_probs=195.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36899999999999999999864 68899999986432 122356788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..+..
T Consensus 81 E~~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIRL----GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 999999999998764 4578889999999999999999999 999999999999999999999999999753210
Q ss_pred CCC-----------------------------------------cccccccccccCccCccccCCCCCCchhhHHHHHHH
Q 035998 898 PYD-----------------------------------------THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVV 936 (1020)
Q Consensus 898 ~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvi 936 (1020)
... ........||+.|+|||++.+..++.++||||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 000 000113478999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCC---CHHHHH
Q 035998 937 LLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRP---TTQQLV 1013 (1020)
Q Consensus 937 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl 1013 (1020)
+|||++|+.||....+.+. . ..+..... ....+. .......+.+++.+|+ .+|.+|+ ++.+++
T Consensus 234 lyell~G~~Pf~~~~~~~~---~---~~i~~~~~--~~~~~~-----~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 234 LYEMLVGQPPFLADTPAET---Q---LKVINWET--TLHIPS-----QAKLSREASDLILRLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred eeehhhCCCCCCCCCHHHH---H---HHHhccCc--cccCCC-----CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence 9999999999975432211 1 11110000 000000 0011234667777776 4999999 889887
Q ss_pred H
Q 035998 1014 S 1014 (1020)
Q Consensus 1014 ~ 1014 (1020)
+
T Consensus 300 ~ 300 (376)
T cd05598 300 A 300 (376)
T ss_pred C
Confidence 5
No 182
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=6.4e-34 Score=312.57 Aligned_cols=263 Identities=26% Similarity=0.403 Sum_probs=203.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-----CCCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEecc--Cce
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-----PDGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDR 813 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 813 (1020)
..|++.+.||+|+||.||+|++ .++..||+|.+.... ......+.+|++++++++|||++++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3478899999999999999974 357889999987553 33346789999999999999999999998775 567
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++||||+++++|.+++.+. ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.++++|||+++
T Consensus 84 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 8999999999999998653 23579999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCc-ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------CCcc-cHHHHHH
Q 035998 894 LILSPYDT-HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKP--------KGSR-DLISWVI 963 (1020)
Q Consensus 894 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~--------~~~~-~~~~~~~ 963 (1020)
........ .......++..|+|||+..+..++.++||||+|+++|||++++.|+..... .... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 76432221 112234567789999998888899999999999999999998776532110 0000 1111111
Q ss_pred HHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 964 RMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 964 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
........ +........+.+++.+||+.+|.+||+++++++.|++++
T Consensus 238 ~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 238 VLEEGKRL----------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred HHHcCccC----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 11111100 001122346899999999999999999999999999875
No 183
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.6e-34 Score=310.80 Aligned_cols=248 Identities=27% Similarity=0.416 Sum_probs=196.6
Q ss_pred CeeeccCCeEEEEEEeC--C--CCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP--D--GRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|.+. + +..||+|.+..... ...+++.+|+++++++.||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999753 2 36899999886653 34567899999999999999999999876 4567999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.........
T Consensus 80 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKR----REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 9999999764 3678999999999999999999999 99999999999999999999999999998764322211
Q ss_pred -cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 903 -VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 903 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
......++..|+|||...+..++.++||||||+++|||++ |+.||...... +...+. ...... .
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~---~~~~~~-~------- 218 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAML---ESGERL-P------- 218 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHH---HcCCcC-C-------
Confidence 1111223467999999998999999999999999999998 99999754321 122111 111110 0
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.+......+.+++.+||+.+|.+||++.++++.|+++
T Consensus 219 --~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 219 --RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred --CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 1111224688999999999999999999999999875
No 184
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-34 Score=325.89 Aligned_cols=259 Identities=27% Similarity=0.390 Sum_probs=204.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC--------CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccC
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP--------DGRNVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 811 (1020)
.+|++.+.||+|+||.||+|+.. .+..||+|.+.... ....+++.+|+++++++ +||||+++++++....
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46899999999999999999742 12368999887543 23346788999999999 7999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLD------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD 879 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 879 (1020)
..+++|||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 99999999999999999876421 123578899999999999999999999 999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccH
Q 035998 880 GNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDL 958 (1020)
Q Consensus 880 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~ 958 (1020)
.++.+||+|||+++...............++..|+|||+..+..++.++||||||+++|||++ |..||......
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----- 243 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE----- 243 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----
Confidence 999999999999986543221112222334567999999999999999999999999999998 88888643211
Q ss_pred HHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 959 ISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 959 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
........... .. .+......+.+++.+||+.+|.+||++.|+++.|+++
T Consensus 244 -~~~~~~~~~~~-~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 244 -ELFKLLKEGHR-MD---------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred -HHHHHHHcCCC-CC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 11111111110 01 0111234688999999999999999999999999876
No 185
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.9e-35 Score=326.10 Aligned_cols=241 Identities=24% Similarity=0.328 Sum_probs=192.6
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
+|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+..|.+++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788999999999999999865 578999999875432 2234466778888777 5899999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQV----GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 999999999888654 4588999999999999999999999 999999999999999999999999999875422
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+..... .
T Consensus 154 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~---~~~~---~i~~~~~--~---- 219 (323)
T cd05616 154 D--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQ---SIMEHNV--A---- 219 (323)
T ss_pred C--CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH---HHHH---HHHhCCC--C----
Confidence 1 12233457899999999999999999999999999999999999999753321 1111 1111100 0
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTT 1009 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1009 (1020)
.+......+.+++.+|++.||.+|+++
T Consensus 220 -----~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 220 -----YPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -----CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 011122457899999999999999984
No 186
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.6e-34 Score=328.03 Aligned_cols=255 Identities=21% Similarity=0.254 Sum_probs=198.4
Q ss_pred HHhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCce
Q 035998 738 LESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 738 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 813 (1020)
....++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 334578999999999999999999875 57899999986422 12234578899999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccce
Confidence 9999999999999988653 478889999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCcccccccccccCccCccccCCC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 894 LILSPYDTHVTTDLVGTLGYIPPEYGQAS----VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 894 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
...... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+....
T Consensus 191 ~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~------~~~~~i~~~~ 263 (370)
T cd05621 191 KMDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV------GTYSKIMDHK 263 (370)
T ss_pred ecccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC
Confidence 764321 1122346799999999987654 3788999999999999999999999743221 1111111111
Q ss_pred ccccccCccccCccCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 035998 970 RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKV--RPTTQQLVS 1014 (1020)
Q Consensus 970 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1014 (1020)
......+ .......+.+++.+|++.+|.+ ||+++|+++
T Consensus 264 ~~~~~p~-------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 264 NSLNFPE-------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred cccCCCC-------cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 1001000 0112235678889999866544 899999986
No 187
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.6e-34 Score=309.66 Aligned_cols=249 Identities=26% Similarity=0.397 Sum_probs=199.2
Q ss_pred CeeeccCCeEEEEEEeCCCCEEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCChh
Q 035998 748 NIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSLD 826 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 826 (1020)
++||+|+||.||+|...+++.||+|.+...... ....+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999999877999999998765433 4567899999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcccccc
Q 035998 827 YWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTD 906 (1020)
Q Consensus 827 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 906 (1020)
+++... ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.+|++|||.++.............
T Consensus 81 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 998754 23578899999999999999999999 999999999999999999999999999976532111111112
Q ss_pred cccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 907 LVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 907 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
...+..|+|||...++.++.++|+||+|+++|||+| |..||........ .......... . .+.
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~------~~~~~~~~~~---~-------~~~ 218 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT------RERIESGYRM---P-------APQ 218 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH------HHHHhcCCCC---C-------CCc
Confidence 234567999999988899999999999999999999 8888865432111 1111111000 0 011
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 986 KEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
.....+.+++.+|++.+|.+||++.|+++.|+.
T Consensus 219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 123468899999999999999999999999863
No 188
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=8.3e-35 Score=324.05 Aligned_cols=240 Identities=28% Similarity=0.399 Sum_probs=190.2
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.+ +|+.||+|.++... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999875 68899999987542 12234566677777754 899999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~i~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 151 (316)
T cd05620 81 GDLMFHIQDK----GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DN 151 (316)
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC--CC
Confidence 9999888753 4678999999999999999999999 9999999999999999999999999998753211 12
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... ..+.... +.+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~---~~~~~~~-------~~~~~- 217 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELF---ESIRVDT-------PHYPR- 217 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHH---HHHHhCC-------CCCCC-
Confidence 233467899999999999999999999999999999999999999643221 111 1111111 00000
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQ-QLV 1013 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 1013 (1020)
....++.+++.+|++.||++||++. ++.
T Consensus 218 ---~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 ---WITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ---CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1123578999999999999999985 554
No 189
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.1e-34 Score=317.74 Aligned_cols=257 Identities=25% Similarity=0.390 Sum_probs=200.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.+.||+|+||.||+|... ++..||+|.+.... .....++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36889999999999999999865 57889999887543 23345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... ..+++..+..++.|+++||+|||+.. +++||||||+||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 81 MDGGSLDQVLKKA----GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 9999999998754 45789999999999999999999732 8999999999999999999999999998765322
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc-------
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES------- 972 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------- 972 (1020)
......++..|+|||...+..++.++||||||+++|||++|+.||............ ..........
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMF---GRPVSEGEAKESHRPVS 227 (308)
T ss_pred ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhh---cCccccccccCCccccc
Confidence 223457889999999988888999999999999999999999998643221111000 0000000000
Q ss_pred --------------------cccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 --------------------EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 --------------------~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....|... .......+.+++.+||+.+|++||+++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 286 (308)
T cd06615 228 GHPPDSPRPMAIFELLDYIVNEPPPKLP---SGAFSDEFQDFVDKCLKKNPKERADLKELTK 286 (308)
T ss_pred CCCCCccchhhHHHHHHHHhcCCCccCc---CcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000 0012235889999999999999999999987
No 190
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.9e-34 Score=308.67 Aligned_cols=240 Identities=23% Similarity=0.400 Sum_probs=189.4
Q ss_pred CeeeccCCeEEEEEEeCC-------------CCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceE
Q 035998 748 NIIGCGGFGLVYRATLPD-------------GRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 814 (1020)
+.||+|+||.||+|.+.+ ...||+|.+..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999997532 2358999887655555567888999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC-------eEEe
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG-------AHLA 887 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-------~kl~ 887 (1020)
+||||+++++|+.++... ...+++..++.++.||++|++|||+. +|+||||||+||+++.++. ++++
T Consensus 81 lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK---SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 999999999999887653 24589999999999999999999999 9999999999999987664 8999
Q ss_pred eccccccccCCCCcccccccccccCccCccccC-CCCCCchhhHHHHHHHHHHHH-cCCCCCCCCCCCCcccHHHHHHHH
Q 035998 888 DFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQ-ASVATYKGDVYSFGVVLLELL-TGKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 888 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~ell-tg~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||......+. ...
T Consensus 155 d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-------~~~ 221 (262)
T cd05077 155 DPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-------ERF 221 (262)
T ss_pred CCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-------HHH
Confidence 99998754321 2345778899999876 567899999999999999998 58888764321110 011
Q ss_pred HhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 966 RQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
.... .....+ ....+.+++.+||+.||.+||++.++++.|+
T Consensus 222 ~~~~--~~~~~~---------~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 222 YEGQ--CMLVTP---------SCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HhcC--ccCCCC---------ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1100 000111 1235789999999999999999999998763
No 191
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.3e-34 Score=319.74 Aligned_cols=241 Identities=25% Similarity=0.349 Sum_probs=192.9
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.+ +++.||||++.... ......+.+|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 57899999997542 12234567788888888 799999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 ~~L~~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~ 151 (318)
T cd05570 81 GDLMFHIQRS----GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--GV 151 (318)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcC--CC
Confidence 9998888654 4689999999999999999999999 9999999999999999999999999998753221 11
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......|++.|+|||++.+..++.++||||+||++|||++|+.||..... .. ....+..... ..+
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~---~~---~~~~i~~~~~----~~~----- 216 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE---DE---LFQSILEDEV----RYP----- 216 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH---HH---HHHHHHcCCC----CCC-----
Confidence 22335689999999999999999999999999999999999999964321 11 1111111110 001
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTT-----QQLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 1014 (1020)
......+.+++.+||+.||.+||++ .++++
T Consensus 217 --~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 217 --RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred --CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1122357899999999999999999 87765
No 192
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.7e-34 Score=316.12 Aligned_cols=250 Identities=23% Similarity=0.376 Sum_probs=202.8
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..+|++.+.||+|+||.||+|.. .+++.||+|.+..........+.+|+++++.++|||++++++++......++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 35789999999999999999985 46889999998765544456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++......
T Consensus 99 ~~~~~L~~~~~~~-----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred cCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 9999999988642 478899999999999999999999 99999999999999999999999999987653221
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......+++.|+|||...+..++.++|||||||++|+|++|+.||....+.. . +...... . ......
T Consensus 171 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~---~~~~~~~-~-~~~~~~--- 238 (296)
T cd06654 171 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--A---LYLIATN-G-TPELQN--- 238 (296)
T ss_pred --cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--h---HHHHhcC-C-CCCCCC---
Confidence 11233468889999999988889999999999999999999999996433211 1 1111110 0 001001
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+......+.+++.+||..+|++||++.++++
T Consensus 239 ----~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 239 ----PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ----ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 1122345789999999999999999999987
No 193
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4e-34 Score=314.02 Aligned_cols=251 Identities=26% Similarity=0.390 Sum_probs=198.7
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.|+..+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++|++++++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677889999999999999865 68899999986542 1223456789999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++++|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||++......
T Consensus 81 ~~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 81 LMNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred ecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 99999999988653 224588999999999999999999998 9999999999999999999999999998764321
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
.......|+..|+|||++.+..++.++||||+|+++|+|++|+.||..................... .
T Consensus 156 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~---------~ 223 (285)
T cd05630 156 ---QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQE---------E 223 (285)
T ss_pred ---ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhh---------h
Confidence 1122347899999999999999999999999999999999999999754322111111111000000 0
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPT-----TQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1014 (1020)
. .......+.+++.+||+.||++||+ ++|+++
T Consensus 224 ~----~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 224 Y----SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred c----CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0 0111235789999999999999999 888887
No 194
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.2e-35 Score=325.35 Aligned_cols=238 Identities=24% Similarity=0.302 Sum_probs=191.3
Q ss_pred CeeeccCCeEEEEEEe----CCCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 748 NIIGCGGFGLVYRATL----PDGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
+.||+|+||.||+++. .+|+.||+|++..... .....+.+|++++++++||||+++++++.+....|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999874 3678999999975432 123456789999999999999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-- 152 (318)
T cd05582 82 GGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-- 152 (318)
T ss_pred CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--
Confidence 99999888653 4689999999999999999999999 99999999999999999999999999988653321
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccC
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYD 981 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 981 (1020)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+..... .
T Consensus 153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~------~~~~~~i~~~~~--~-------- 216 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR------KETMTMILKAKL--G-------- 216 (318)
T ss_pred CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH------HHHHHHHHcCCC--C--------
Confidence 223345789999999999988899999999999999999999999974321 111111111110 0
Q ss_pred ccCHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 035998 982 KQHDKEMLRVLDIACLCLSESPKVRPTTQQ 1011 (1020)
Q Consensus 982 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 1011 (1020)
.+......+.+++.+||+.||++||++.+
T Consensus 217 -~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 -MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00111235789999999999999999544
No 195
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.1e-34 Score=312.13 Aligned_cols=252 Identities=32% Similarity=0.491 Sum_probs=200.4
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHH--HHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMER--EFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
|++.+.||+|+||+||+++.. +++.||+|.+......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567899999999999999976 4568999999877543222 3456999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++... ..+++..+..++.|+++||++||+. +++||||||+||+++.++.++|+|||.+.... ..
T Consensus 81 ~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~ 151 (260)
T PF00069_consen 81 PGGSLQDYLQKN----KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS--EN 151 (260)
T ss_dssp TTEBHHHHHHHH----SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST--ST
T ss_pred cccccccccccc----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc--cc
Confidence 999999999833 4679999999999999999999999 99999999999999999999999999997641 12
Q ss_pred cccccccccccCccCccccC-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQ-ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
........++..|+|||+.. +..++.++||||+|+++|+|++|..||..... .+...................
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~--- 225 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS---DDQLEIIEKILKRPLPSSSQQ--- 225 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH---HHHHHHHHHHHHTHHHHHTTS---
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc---hhhhhhhhhcccccccccccc---
Confidence 23344567889999999988 88999999999999999999999999975411 111111111111000000000
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+.+++.+||+.||++||++.++++
T Consensus 226 ----~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 226 ----SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp ----HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ----cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0001157899999999999999999999985
No 196
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3e-34 Score=312.79 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=202.1
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC----CCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD----GRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
.++|.+.+.||+|+||.||+|.+.+ ...||||...... ....+.+.+|++++++++||||+++++++.+ ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3467888999999999999998643 3468999987665 3445678999999999999999999998875 45789
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
||||+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 84 VMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 99999999999999764 23589999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.... ........++..|+|||......++.++||||||+++|||++ |..||......+ ... .........
T Consensus 158 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~---~~~~~~~~~-- 228 (270)
T cd05056 158 EDES-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND---VIG---RIENGERLP-- 228 (270)
T ss_pred cccc-ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH---HHH---HHHcCCcCC--
Confidence 4321 111222334568999999888889999999999999999996 999997543221 111 111111110
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
. +......+.+++.+|+..+|.+|||+.++++.|+++
T Consensus 229 -~-------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 229 -M-------PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred -C-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 111224688999999999999999999999999875
No 197
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.4e-34 Score=311.57 Aligned_cols=255 Identities=27% Similarity=0.421 Sum_probs=204.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
.++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.+ ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 46789999999999999999998778889999887543 234578899999999999999999999887 7789999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 156 (260)
T cd05073 83 AKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE- 156 (260)
T ss_pred CCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCC-
Confidence 999999998764 234578899999999999999999998 99999999999999999999999999997653321
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
........++..|+|||++....++.++|+||||+++|++++ |..||...... +...+ ....... .
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~---~~~~~~~-~------ 223 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRA---LERGYRM-P------ 223 (260)
T ss_pred cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHH---HhCCCCC-C------
Confidence 112222345678999999988899999999999999999999 89999643221 11111 1111000 0
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
........+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 224 ---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 224 ---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred ---CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 0112234688999999999999999999999999863
No 198
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=309.99 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=208.1
Q ss_pred CCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
-|+..+-||+|.|+.|-+|++ -+|..||||++.+..- .....+.+|++.|+.++|||||++|++.......|+|.|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 477778899999999999974 4799999999976542 2345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEE-cCCCCeEEeeccccccccCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILL-DGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
=++|+|.+|+... ...+.++-+.+++.||+.|+.|+|+. .+|||||||+||++ ..-|-+|++|||++..+..
T Consensus 99 GD~GDl~DyImKH---e~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P- 171 (864)
T KOG4717|consen 99 GDGGDLFDYIMKH---EEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP- 171 (864)
T ss_pred cCCchHHHHHHhh---hccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC-
Confidence 9999999999765 34688999999999999999999999 99999999999876 6778999999999987632
Q ss_pred CCcccccccccccCccCccccCCCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVAT-YKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
.......+|+..|-|||++.+..|+ +++||||+|||+|-+++|+.||+..++.+....+...+.
T Consensus 172 --G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY------------- 236 (864)
T KOG4717|consen 172 --GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY------------- 236 (864)
T ss_pred --cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc-------------
Confidence 3345567899999999999887775 689999999999999999999998777665443321111
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS--WLD 1017 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~ 1017 (1020)
..+..-..+..++|..|+..||.+|.+.++|+. ||+
T Consensus 237 ----tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 237 ----TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred ----cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 112333456889999999999999999999986 554
No 199
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=8.5e-34 Score=306.59 Aligned_cols=249 Identities=29% Similarity=0.423 Sum_probs=202.5
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|++|.||+|..+ +++.|++|.+.... ......+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999865 68899999986432 33456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++.... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.++++|||+++......
T Consensus 81 ~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99999999987642 34688999999999999999999998 99999999999999999999999999988764322
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......|++.|+|||+..+..++.++|+||||+++|||++|+.||..... .... ..... ..... .
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~---~~~~~-~~~~~-----~ 221 (256)
T cd08529 156 --NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ---GALI---LKIIR-GVFPP-----V 221 (256)
T ss_pred --chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---HHHH---HHHHc-CCCCC-----C
Confidence 122334678899999999999999999999999999999999999964331 1111 11111 11111 0
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+.+++.+||+.+|++||++.++++
T Consensus 222 ----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 222 ----SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ----ccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 1122346889999999999999999999986
No 200
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.4e-34 Score=310.87 Aligned_cols=252 Identities=28% Similarity=0.487 Sum_probs=202.3
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
.+|++.+.||+|+||.||+|.+.+++.+|+|.+..... ...++.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46788899999999999999887788999998875432 24578899999999999999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++... ...++++.+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.++.......
T Consensus 83 ~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 155 (256)
T cd05112 83 HGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY- 155 (256)
T ss_pred CCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc-
Confidence 99999988753 23578999999999999999999999 999999999999999999999999999876543211
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......++..|+|||...++.++.++||||+|+++|||++ |..||...... . ......... ....+..
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~---~~~~~~~~~---~~~~~~~- 225 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS---E---VVETINAGF---RLYKPRL- 225 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH---H---HHHHHhCCC---CCCCCCC-
Confidence 11122334578999999988899999999999999999998 99999643211 1 111111110 1111111
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
....+.+++.+||+.+|++||++.+++++|.
T Consensus 226 ------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 ------ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ------CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1246889999999999999999999999873
No 201
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2e-34 Score=311.41 Aligned_cols=250 Identities=24% Similarity=0.367 Sum_probs=202.0
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
+|++.+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+++++.++|||++++++++.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788899999999999999865 68899999986432 334467888999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
+++++.+++... ....++.+.+..++.|++.|++|||+. +++|+||||+||++++++.++++|||.++......
T Consensus 81 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 154 (255)
T cd08219 81 DGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG- 154 (255)
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc-
Confidence 999999988653 234578999999999999999999999 99999999999999999999999999997654322
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......+++.|+|||+..+..++.++|+||+|+++|+|++|+.||..... .......... .....
T Consensus 155 -~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~~~------ 220 (255)
T cd08219 155 -AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW------KNLILKVCQG-SYKPL------ 220 (255)
T ss_pred -cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH------HHHHHHHhcC-CCCCC------
Confidence 122345688899999999988999999999999999999999999974321 1111111111 11100
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
+......+.+++.+||+.||++||++.++++.
T Consensus 221 ---~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 ---PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11122357899999999999999999999874
No 202
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.4e-34 Score=313.96 Aligned_cols=255 Identities=24% Similarity=0.434 Sum_probs=202.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCC----EEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGR----NVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
.+|++.+.||+|+||.||+|..+ +|+ .||+|....... ....++.+|++.+++++|||++++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46788999999999999999864 233 589998876543 344678899999999999999999999987 78899
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
||||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++..
T Consensus 86 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 99999999999998764 23589999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.............++..|+|||......++.++|+||+|+++||+++ |+.||...... +.. ........ .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~---~~~~~~~~---~ 230 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EIP---DLLEKGER---L 230 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HHH---HHHhCCCC---C
Confidence 43222111112233568999999888899999999999999999999 99999754321 111 11111111 0
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
..+ ..+...+.+++.+||..+|.+||++.++++.|+++
T Consensus 231 ~~~-------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 231 PQP-------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred CCC-------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 111 11223578999999999999999999999999875
No 203
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3e-34 Score=326.12 Aligned_cols=259 Identities=22% Similarity=0.263 Sum_probs=200.2
Q ss_pred HHHHHHhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEec
Q 035998 734 IDDILESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMH 809 (1020)
Q Consensus 734 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 809 (1020)
+.++....++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3444555688999999999999999999875 67899999986422 1223457789999999999999999999999
Q ss_pred cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 810 KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 810 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
.+..++||||+++|+|.+++... .++...+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeC
Confidence 99999999999999999988653 478888999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCCC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQAS----VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
|+++...... ........||+.|+|||++... .++.++||||+||++|||++|+.||..... ......+
T Consensus 187 G~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i 259 (371)
T cd05622 187 GTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKI 259 (371)
T ss_pred CceeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH------HHHHHHH
Confidence 9998764321 1222346799999999987654 378899999999999999999999974322 1111122
Q ss_pred HhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 035998 966 RQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKV--RPTTQQLVS 1014 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1014 (1020)
..........++ ......+.+++.+|+..++.+ ||+++|+++
T Consensus 260 ~~~~~~~~~~~~-------~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 260 MNHKNSLTFPDD-------NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred HcCCCcccCCCc-------CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 111111111111 112235778999999844433 789999887
No 204
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.9e-34 Score=313.41 Aligned_cols=250 Identities=27% Similarity=0.369 Sum_probs=197.7
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
|+..+.||+|+||+||+|... +++.||+|.+.... ......+.+|++++++++|+|++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999864 68899999986542 12234577899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|..++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~- 155 (285)
T cd05632 82 MNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG- 155 (285)
T ss_pred ccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCC-
Confidence 9999999888653 234689999999999999999999999 9999999999999999999999999998764321
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......|+..|+|||++.+..++.++|+||+|+++|||++|+.||...........+ ........ . ..
T Consensus 156 --~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~--~~~~~~~~---~----~~ 224 (285)
T cd05632 156 --ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV--DRRVLETE---E----VY 224 (285)
T ss_pred --CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHhhhccc---c----cc
Confidence 1123357899999999998889999999999999999999999999753321111111 11111100 0 00
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPT-----TQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1014 (1020)
.......+.+++.+|++.||++||+ +.++++
T Consensus 225 ----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 225 ----SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ----CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 1111235789999999999999999 667665
No 205
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.7e-34 Score=314.62 Aligned_cols=252 Identities=30% Similarity=0.495 Sum_probs=198.5
Q ss_pred CeeeccCCeEEEEEEeCC-------CCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 748 NIIGCGGFGLVYRATLPD-------GRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+.||+|+||.||+|+..+ ++.||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886543 23356788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC-----CeEEeeccc
Q 035998 820 MENGSLDYWLHEKLD---GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF-----GAHLADFGL 891 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~Dfg~ 891 (1020)
+++++|.+++..... ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999976432 224578899999999999999999998 999999999999999877 899999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcc
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENR 970 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 970 (1020)
++...............++..|+|||++.++.++.++||||||+++|||++ |+.||...... .. .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~---~~~~~~~~~ 231 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EV---LQHVTAGGR 231 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HH---HHHHhcCCc
Confidence 986643322222233345678999999999999999999999999999998 99999643221 11 111111110
Q ss_pred cccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 971 ESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 971 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
. .........+.+++.+||+.+|.+||+++++++.|++
T Consensus 232 ~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 232 L----------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred c----------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 0011223467899999999999999999999999874
No 206
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.8e-34 Score=314.91 Aligned_cols=264 Identities=26% Similarity=0.397 Sum_probs=205.4
Q ss_pred ccHHHHHHhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEe-
Q 035998 732 ISIDDILESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCM- 808 (1020)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~- 808 (1020)
+.++.+..+.++|++.+.||+|+||.||+|... +++.||+|++.... ....++.+|+.+++++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 445666778899999999999999999999864 57899999886532 2245678899999999 6999999999884
Q ss_pred ----ccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCe
Q 035998 809 ----HKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGA 884 (1020)
Q Consensus 809 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 884 (1020)
.....++||||+++++|.+++.........+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 33467999999999999998875444445788999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccccCCCCcccccccccccCccCccccC-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHH
Q 035998 885 HLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQ-----ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLI 959 (1020)
Q Consensus 885 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~ 959 (1020)
|++|||+++...... .......|++.|+|||++. ...++.++||||+||++|||++|+.||........ .
T Consensus 164 kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~---~ 238 (286)
T cd06638 164 KLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA---L 238 (286)
T ss_pred EEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH---H
Confidence 999999988653221 1223356889999999875 34578899999999999999999999975432110 0
Q ss_pred HHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 960 SWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 960 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
..... .......++.. ....+.+++.+||+.||++||++.|+++.
T Consensus 239 ---~~~~~-~~~~~~~~~~~-------~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 239 ---FKIPR-NPPPTLHQPEL-------WSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ---hhccc-cCCCcccCCCC-------cCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00000 01111111111 12358899999999999999999999874
No 207
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.4e-34 Score=316.81 Aligned_cols=260 Identities=25% Similarity=0.352 Sum_probs=193.0
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHc---CCCccceEeeEEecc-----C
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRA---QHPNLVHLQGYCMHK-----N 811 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~-----~ 811 (1020)
+|++.+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|+++++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5888999999999999999865 688999999875421 2223456677777665 799999999988642 3
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..++||||+++ +|.+++.... ...++++.+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 47899999975 8888876542 24589999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHh-h--
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQ-E-- 968 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~-- 968 (1020)
++..... .......++..|+|||++.+..++.++||||+||++|||++|++||....... .......... .
T Consensus 155 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~ 228 (288)
T cd07863 155 ARIYSCQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLIGLPPE 228 (288)
T ss_pred cccccCc---ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH---HHHHHHHHhCCCCh
Confidence 9865322 12233567889999999988899999999999999999999999996433211 1111111100 0
Q ss_pred ccccc-------ccCccc---cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 NRESE-------VLDPFI---YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ~~~~~-------~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..... ...+.. .....+.....+.+++.+|++.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000 000000 00011122345789999999999999999999975
No 208
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.3e-34 Score=342.70 Aligned_cols=256 Identities=22% Similarity=0.321 Sum_probs=198.7
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc--CceE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDRL 814 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 814 (1020)
..++|++.+.||+|+||.||+|... ++..||+|.+.... ......+..|+.++++++|||||+++++|.+. ...|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 3468999999999999999999865 57789999886542 23345788999999999999999999988653 4578
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCC----CCeEecCCCCCCEEEcC----------
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCE----PHILHRDIKSSNILLDG---------- 880 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~ivH~Dlkp~NIll~~---------- 880 (1020)
+||||+++|+|.+++.........+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 9999999999999998755445678999999999999999999998521 25999999999999964
Q ss_pred -------CCCeEEeeccccccccCCCCcccccccccccCccCccccCC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Q 035998 881 -------NFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQA--SVATYKGDVYSFGVVLLELLTGKRPMDMCK 951 (1020)
Q Consensus 881 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf~~~~ 951 (1020)
.+.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~---s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIE---SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccCCCCceEEccCCcccccccc---ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 334899999999865322 22234578999999998754 468899999999999999999999996432
Q ss_pred CCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 952 PKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ............ .... .. ....+.++|..||+.+|.+||++.|++.
T Consensus 248 ~-----~~qli~~lk~~p---~lpi----~~----~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 N-----FSQLISELKRGP---DLPI----KG----KSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred c-----HHHHHHHHhcCC---CCCc----CC----CCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 1 111111111111 0000 01 1235889999999999999999999984
No 209
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.8e-34 Score=326.79 Aligned_cols=261 Identities=23% Similarity=0.274 Sum_probs=195.2
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
...|.+.+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+|||++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 447999999999999999999875 578899996432 3456899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+. ++|..++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 242 ~~-~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 242 YR-SDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred cC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 95 6888877653 23689999999999999999999999 99999999999999999999999999998654322
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-CcccHHHHHHHH-Hhhcc-ccccc-
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPK-GSRDLISWVIRM-RQENR-ESEVL- 975 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~- 975 (1020)
.........||+.|+|||++.+..++.++|||||||++|||++|..|+...... ...........+ ..... ..+..
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 222223457899999999999999999999999999999999988765322211 111111111111 11000 00000
Q ss_pred ------------------CccccC---ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 ------------------DPFIYD---KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 ------------------d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+.... .........+.+++.+||+.||.+|||+.|+++
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 000000 000011125788999999999999999999987
No 210
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=9.1e-34 Score=306.60 Aligned_cols=250 Identities=25% Similarity=0.394 Sum_probs=200.2
Q ss_pred CeeeccCCeEEEEEEeCC--C--CEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLPD--G--RNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
++||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|++++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 2 3699999987665 556789999999999999999999999988 888999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc-
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT- 901 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~- 901 (1020)
++|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999886522 4689999999999999999999999 9999999999999999999999999999876442221
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......++..|+|||...+..++.++||||+|+++|||++ |+.||...... +... ....... ....
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~---~~~~~~~--~~~~---- 222 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS---QILK---KIDKEGE--RLER---- 222 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH---HHHH---HHHhcCC--cCCC----
Confidence 11223456788999999999999999999999999999999 99999643221 1111 1111110 0001
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
+......+.+++.+|++.+|++||++.++++.|.+
T Consensus 223 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 223 ---PEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred ---CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 11123468899999999999999999999998863
No 211
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=8.3e-35 Score=325.46 Aligned_cols=237 Identities=26% Similarity=0.347 Sum_probs=187.1
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHH-HHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVE-ALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||+||+|+.. +|+.||+|++..... ...+.+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999875 689999999875321 12233444544 55778999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~ 151 (323)
T cd05575 81 GELFFHLQRE----RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--SK 151 (323)
T ss_pred CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC--CC
Confidence 9999888753 4688999999999999999999999 9999999999999999999999999998754221 12
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+... .. . ..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~-~~-~-~~~----- 217 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA------EMYDNILNK-PL-R-LKP----- 217 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH------HHHHHHHcC-CC-C-CCC-----
Confidence 233457899999999999999999999999999999999999999743211 111111111 00 0 011
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQ 1010 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1010 (1020)
.....+.+++.+|++.||.+||++.
T Consensus 218 ---~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 ---NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ---CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1123578999999999999999984
No 212
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=302.47 Aligned_cols=268 Identities=23% Similarity=0.316 Sum_probs=223.6
Q ss_pred cHHHHHHhccCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCchhh-HHHHHHHHHHHHHcCCCccceEee
Q 035998 733 SIDDILESTNNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCGQM-EREFRAEVEALSRAQHPNLVHLQG 805 (1020)
Q Consensus 733 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~ 805 (1020)
...++.....+++...++.+|.||.||.|.|. +.+.|.||.++....+. ...+..|...+..+.|||+..+.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 34566666788999999999999999999764 34557788877665443 345778888888899999999999
Q ss_pred EEec-cCceEEEEEeccCCChhhhhhhc----CCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC
Q 035998 806 YCMH-KNDRLLIYSFMENGSLDYWLHEK----LDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG 880 (1020)
Q Consensus 806 ~~~~-~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 880 (1020)
++.+ .+..+++|.++..|+|..|+... ....+.++..+.+.++.|++.|++|||++ +|||.||.++|.+||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 9875 45678999999999999999832 23455778889999999999999999999 9999999999999999
Q ss_pred CCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHH
Q 035998 881 NFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLI 959 (1020)
Q Consensus 881 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~ 959 (1020)
.-++|++|=.++|.....+..........+..||+||.+....|+.++|||||||++|||+| |+.||....+.+...++
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl 511 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL 511 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH
Confidence 99999999999998876544444444556789999999999999999999999999999999 99999988887777776
Q ss_pred HHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 960 SWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 960 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
....+..++..+ +.+++.+|..||+.+|++||++++++..|.++
T Consensus 512 kdGyRlaQP~NC----------------PDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 512 KDGYRLAQPFNC----------------PDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred hccceecCCCCC----------------cHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 655555554443 33689999999999999999999999998764
No 213
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.2e-34 Score=322.89 Aligned_cols=261 Identities=23% Similarity=0.312 Sum_probs=194.5
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC------
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN------ 811 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 811 (1020)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 468999999999999999999864 68899999986542 233456788999999999999999999986543
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..++||||+++ ++...+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 46899999976 45554432 368888999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcc------------cHH
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSR------------DLI 959 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~------------~~~ 959 (1020)
++.... ........||+.|+|||++.+..++.++||||+||++|+|++|+.||......... ...
T Consensus 170 a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 170 ARTACT---NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred cccccc---CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 976422 12233457899999999999999999999999999999999999999754321100 000
Q ss_pred HHH----HHHHhhcc-c-----ccccCccccC---ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 960 SWV----IRMRQENR-E-----SEVLDPFIYD---KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 960 ~~~----~~~~~~~~-~-----~~~~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
... ........ . .+....+... .........+.+++.+|++.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 00000000 0 0000000000 000112245789999999999999999999987
No 214
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.1e-34 Score=321.93 Aligned_cols=192 Identities=24% Similarity=0.357 Sum_probs=164.2
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
...+|++.+.||+|+||.||+|+.. +++.||+|+.... ....|+.++++++||||+++++++......++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3467999999999999999999875 5678999975432 23468999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+. ++|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.++....
T Consensus 138 ~~~-~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~- 209 (357)
T PHA03209 138 HYS-SDLYTYLTKR---SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV- 209 (357)
T ss_pred ccC-CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccccc-
Confidence 995 5788877653 34689999999999999999999999 999999999999999999999999999975322
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPM 947 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf 947 (1020)
........||+.|+|||++.+..++.++||||+||++|||+++..|+
T Consensus 210 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 210 --APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 11223456899999999999999999999999999999999965544
No 215
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.6e-34 Score=309.86 Aligned_cols=251 Identities=29% Similarity=0.464 Sum_probs=192.1
Q ss_pred CeeeccCCeEEEEEEeC----CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEe-ccCceEEEEEecc
Q 035998 748 NIIGCGGFGLVYRATLP----DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCM-HKNDRLLIYSFME 821 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 821 (1020)
+.||+|+||.||+|.+. ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++. .+...++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999753 24579999885432 334567888999999999999999999876 4556789999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++... ....++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999998754 23457788899999999999999998 9999999999999999999999999999765332111
Q ss_pred --ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 902 --HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTG-KRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 902 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
.......++..|+|||...+..++.++||||||+++|||++| .+||..... .+.. ......... ..+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~---~~~~~~~~~---~~~- 224 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS---FDIT---VYLLQGRRL---LQP- 224 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHH---HHHhcCCCC---CCC-
Confidence 111233456789999999888999999999999999999995 556643221 1111 111111100 000
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
......+.+++.+||+.+|++||++.|+++.|++++
T Consensus 225 ------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 225 ------EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 011235889999999999999999999999998763
No 216
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.3e-34 Score=311.79 Aligned_cols=239 Identities=24% Similarity=0.394 Sum_probs=187.8
Q ss_pred eeeccCCeEEEEEEeCC-------------------------CCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceE
Q 035998 749 IIGCGGFGLVYRATLPD-------------------------GRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHL 803 (1020)
Q Consensus 749 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 803 (1020)
.||+|+||.||+|.+.. ...||+|++..........+.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999996421 13589999876554455678889999999999999999
Q ss_pred eeEEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC-
Q 035998 804 QGYCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF- 882 (1020)
Q Consensus 804 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 882 (1020)
++++.+....++||||+++|+|..++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE---KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 99999999999999999999999988653 24678999999999999999999998 999999999999997643
Q ss_pred ------CeEEeeccccccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHH-cCCCCCCCCCCCC
Q 035998 883 ------GAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELL-TGKRPMDMCKPKG 954 (1020)
Q Consensus 883 ------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~ell-tg~~pf~~~~~~~ 954 (1020)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||....+.+
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 3799999988654221 12356788999998765 56899999999999999995 6999997543321
Q ss_pred cccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 955 SRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
. ... ......... .. ...+.+++.+||+.+|++||+++++++.|+
T Consensus 230 ~---~~~---~~~~~~~~~--------~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 K---ERF---YEKKHRLPE--------PS----CKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H---HHH---HHhccCCCC--------CC----ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1 111 111111110 01 125789999999999999999999999874
No 217
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.1e-34 Score=315.24 Aligned_cols=262 Identities=26% Similarity=0.407 Sum_probs=205.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-----CCCEEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEec--cCce
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-----DGRNVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMH--KNDR 813 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 813 (1020)
++|+..+.||+|+||.||+|++. ++..||||.+...... ..+.+.+|++.+++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45778899999999999999853 3678999999866443 46689999999999999999999999887 5578
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 9999999999999999764 23589999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCc-ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcc--------cHHHHH-H
Q 035998 894 LILSPYDT-HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSR--------DLISWV-I 963 (1020)
Q Consensus 894 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~--------~~~~~~-~ 963 (1020)
........ .......++..|+|||...+..++.++||||||+++|||++|+.|+......... ...... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 76432221 1111234456799999998889999999999999999999999998643221110 001111 1
Q ss_pred HHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 964 RMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 964 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
........ ..+.....++.+++.+||+.+|++||++.|++++|+++
T Consensus 238 ~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 238 LLKEGERL----------PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHcCCcC----------CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11111100 00112224688999999999999999999999999986
No 218
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.3e-34 Score=324.19 Aligned_cols=241 Identities=25% Similarity=0.317 Sum_probs=188.1
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHH-HHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEV-EALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.. +++.||+|++..... .....+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999865 578899999875321 1223344444 356778999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 ~~L~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--~~ 151 (325)
T cd05602 81 GELFYHLQRE----RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NG 151 (325)
T ss_pred CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC--CC
Confidence 9999988753 4577888899999999999999999 9999999999999999999999999999754322 12
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... ..... .. ...+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~---~i~~~-~~--~~~~----- 217 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EMYD---NILNK-PL--QLKP----- 217 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH---HHHH---HHHhC-Cc--CCCC-----
Confidence 233457899999999999999999999999999999999999999743221 1111 11111 00 0011
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.....+.+++.+|++.||.+||++.+.+.
T Consensus 218 ---~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 218 ---NITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred ---CCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 11235789999999999999999875443
No 219
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-34 Score=310.10 Aligned_cols=253 Identities=25% Similarity=0.323 Sum_probs=199.2
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDC--GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
...|+++++||+|+.++||++...+.+.||+|++.... .+....|.+|+..+.++ .|.+||++++|-..++..||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 45789999999999999999998888899998765432 34556799999999999 5999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||= ..||..++..+. ..++.-.++.+..|++.|+.++|.+ ||||.||||.|+|+- .|.+||+|||.|..+..
T Consensus 440 E~G-d~DL~kiL~k~~---~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKK---SIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQP 511 (677)
T ss_pred ecc-cccHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCc
Confidence 964 459999998763 2233227889999999999999999 999999999999985 46899999999998866
Q ss_pred CCCcccccccccccCccCccccCCC-----------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQAS-----------VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR 966 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 966 (1020)
+...-.....+||+.||+||.+... +.+.++||||+|||+|+|+.|+.||... ...+.....+.
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-----~n~~aKl~aI~ 586 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-----INQIAKLHAIT 586 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-----HHHHHHHHhhc
Confidence 5555556678999999999976433 2567999999999999999999999632 12222222222
Q ss_pred hhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 967 QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 967 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+. .++.-|.+... .+++++|+.|+++||.+||++.++++
T Consensus 587 ~P~--~~Iefp~~~~~------~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 587 DPN--HEIEFPDIPEN------DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred CCC--ccccccCCCCc------hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 221 22111211111 13899999999999999999999987
No 220
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.5e-34 Score=321.29 Aligned_cols=241 Identities=24% Similarity=0.339 Sum_probs=192.0
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcC-CCccceEeeEEeccCceEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQ-HPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 817 (1020)
+|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|.++++.+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999865 68899999987542 122345677888888885 577888999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~~----~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQV----GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 999999999988754 4689999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+.... . .
T Consensus 154 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~---~i~~~~-~-~---- 219 (323)
T cd05615 154 D--GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED---ELFQ---SIMEHN-V-S---- 219 (323)
T ss_pred C--CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH---HHHH---HHHhCC-C-C----
Confidence 2 12223456899999999999999999999999999999999999999753221 1111 111110 0 0
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTT 1009 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1009 (1020)
.+......+.+++.+|++.+|.+|++.
T Consensus 220 -----~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 220 -----YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -----CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 011122357899999999999999984
No 221
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-35 Score=318.28 Aligned_cols=247 Identities=24% Similarity=0.364 Sum_probs=203.5
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCChh
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSLD 826 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 826 (1020)
-++|+|.||+||-|+.. +...+|||.+........+-++.|+..-++++|+|||+++|.+.+.+..-|.||-++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 36999999999999965 45679999998766666677899999999999999999999999999888999999999999
Q ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc-CCCCeEEeeccccccccCCCCccccc
Q 035998 827 YWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD-GNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 827 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
+.++.+. ++-.-.+.+.-.+-+||++||.|||+. .|||||||-+|||++ -.|.+||+|||-+++... -...+.
T Consensus 661 sLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~TE 734 (1226)
T KOG4279|consen 661 SLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCTE 734 (1226)
T ss_pred HHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc--CCcccc
Confidence 9999764 222237788889999999999999999 999999999999996 588999999999998743 345566
Q ss_pred ccccccCccCccccCCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCcc
Q 035998 906 DLVGTLGYIPPEYGQAS--VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQ 983 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 983 (1020)
...||..|||||++..+ .|+.++|||||||++.||.||++||....... ..+-.+...+. .| +.
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--AAMFkVGmyKv--------HP----~i 800 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--AAMFKVGMYKV--------HP----PI 800 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh--Hhhhhhcceec--------CC----CC
Confidence 78899999999998765 58899999999999999999999997654321 11211111111 11 22
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 984 HDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 984 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+.+...+...+|.+|+.+||.+||+++++++
T Consensus 801 Peelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 801 PEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 4455667889999999999999999999986
No 222
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=8.7e-34 Score=308.95 Aligned_cols=255 Identities=24% Similarity=0.368 Sum_probs=189.9
Q ss_pred CeeeccCCeEEEEEEeCC---CCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 748 NIIGCGGFGLVYRATLPD---GRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
+.||+|+||.||+|...+ ...+|+|.+.... ......+.+|++.++.++||||+++++++......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 358999999999997543 4568888876443 233456888999999999999999999999999999999999999
Q ss_pred ChhhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 824 SLDYWLHEKLDG-PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 824 ~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
+|.+++...... ....++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999765322 23456788899999999999999999 99999999999999999999999999987543221111
Q ss_pred cccccccccCccCccccC-------CCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 903 VTTDLVGTLGYIPPEYGQ-------ASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
......++..|+|||+.. ...++.++||||+||++|||++ |..||....+. +... ..... .....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~~---~~~~~-~~~~~ 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE---QVLK---QVVRE-QDIKL 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHHH---HHhhc-cCccC
Confidence 122334567899999764 3456889999999999999999 78888643221 1111 11111 11111
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
.++.... .....+.+++..|| .||++||++++|++.|.
T Consensus 231 ~~~~~~~----~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQLDL----KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCcccc----cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 2221111 12235667888898 59999999999999874
No 223
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.2e-34 Score=316.80 Aligned_cols=261 Identities=21% Similarity=0.325 Sum_probs=198.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.+.||+|+||.||+|+.+ +++.||+|.+.... ......+.+|++++++++||||+++++++......++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56899999999999999999865 67899999986443 22334577899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++....+.
T Consensus 86 ~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 97 5888887653 24578999999999999999999999 99999999999999999999999999997653221
Q ss_pred CcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHh---hccccccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQ---ENRESEVL 975 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 975 (1020)
.......+++.|+|||...+ ..++.++||||+||++|||++|+.||...... +.......... ........
T Consensus 159 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 159 --KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE---EQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred --CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCChhhchhhh
Confidence 12223456889999998755 45788999999999999999999999754321 11111111100 00000000
Q ss_pred C---------ccccCc----cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 D---------PFIYDK----QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 d---------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+ +..... ..+.....+.+++.+|++.||.+|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 000000 00112235789999999999999999999987
No 224
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=322.19 Aligned_cols=198 Identities=25% Similarity=0.328 Sum_probs=171.1
Q ss_pred CCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcC-C-----CccceEeeEEeccCceEE
Q 035998 743 NFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQ-H-----PNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 815 (1020)
+|++.+.||+|+||.|.+|.. ++++.||||+++.... -.++...|+.++..++ | -|+|+++++|..+.+.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 799999999999999999975 5699999999987643 2456677999999996 4 489999999999999999
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC--CCeEEeeccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN--FGAHLADFGLAR 893 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~~~ 893 (1020)
|+|.++ -+|.++++.. ....++...++.|+.||+.||.+||+. +|||+||||+|||+.+- ..+||+|||.|.
T Consensus 266 VfELL~-~NLYellK~n--~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNN--KFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eehhhh-hhHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccc
Confidence 999885 5899999875 345689999999999999999999999 99999999999999643 369999999998
Q ss_pred cccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 035998 894 LILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKP 952 (1020)
Q Consensus 894 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~ 952 (1020)
.... ....++-+..|+|||++.+.+|+.+.||||||||++||++|.+-|.+...
T Consensus 340 ~~~q-----~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 340 FESQ-----RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred ccCC-----cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 7532 12256778899999999999999999999999999999999888865443
No 225
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=4.1e-34 Score=317.01 Aligned_cols=255 Identities=26% Similarity=0.453 Sum_probs=199.6
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCC----EEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGR----NVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
++|+..+.||+|+||.||+|.+. ++. .||+|.+..... ....++.+|+.++++++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 46788899999999999999864 343 578998876543 2334688999999999999999999998754 4678
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
++||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccc
Confidence 99999999999988754 23578999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.............++..|+|||...+..++.++||||||+++|||++ |+.||...... ..... .......
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~---~~~~~---~~~~~~~--- 230 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---EIPDL---LEKGERL--- 230 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH---HHCCCCC---
Confidence 43222212223345678999999999999999999999999999998 99999643211 11111 1111110
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
..+ ..+...+.+++.+||..+|++||+++++++.|+++
T Consensus 231 ~~~-------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 231 PQP-------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred CCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 000 11224678999999999999999999999998875
No 226
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.8e-34 Score=310.68 Aligned_cols=252 Identities=27% Similarity=0.392 Sum_probs=199.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
++|++.+.||+|+||.||+|+.. +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46788899999999999999864 68899999987665444556788999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 89 ~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-- 159 (267)
T cd06645 89 GGGSLQDIYHVT----GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-- 159 (267)
T ss_pred CCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc--
Confidence 999999988654 4688999999999999999999999 9999999999999999999999999998765322
Q ss_pred cccccccccccCccCccccC---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 901 THVTTDLVGTLGYIPPEYGQ---ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
........|+..|+|||++. ...++.++||||+||++|+|++|+.||....+... . ...........
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~--~----~~~~~~~~~~~---- 229 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--L----FLMTKSNFQPP---- 229 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh--H----HhhhccCCCCC----
Confidence 12223457889999999864 45688999999999999999999999864332111 1 01111110000
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.... .......+.+++.+|++.+|++||+++++++
T Consensus 230 ~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 230 KLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0000 0011235789999999999999999999875
No 227
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-33 Score=312.42 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=203.2
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36799999999999999999985 47899999999765544456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++.+. .+++.++..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+.......
T Consensus 98 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 98 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred cCCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 9999999988653 578899999999999999999999 99999999999999999999999999987653221
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......+++.|+|||...+..++.++|+||+||++|+|++|+.||....+...... ..... ......
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~------~~~~~-~~~~~~--- 237 (297)
T cd06656 170 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNG-TPELQN--- 237 (297)
T ss_pred --cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee------eccCC-CCCCCC---
Confidence 122334678899999999888899999999999999999999999965332111000 00000 000000
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+......+.+++.+||+.+|++||+++++++
T Consensus 238 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 238 ----PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ----ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122245789999999999999999999987
No 228
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.1e-33 Score=305.59 Aligned_cols=254 Identities=21% Similarity=0.366 Sum_probs=190.4
Q ss_pred eeeccCCeEEEEEEeCCC---CEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCC
Q 035998 749 IIGCGGFGLVYRATLPDG---RNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGS 824 (1020)
Q Consensus 749 ~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 824 (1020)
.||+|+||.||+|...++ ..+++|.+.... ....+.+.+|+..++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975433 356677766543 2345678999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcccc
Q 035998 825 LDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVT 904 (1020)
Q Consensus 825 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 904 (1020)
|.+++.+........++..+..++.||++||+|||+. +++||||||+||+++.++.+|++|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999986533334567778889999999999999998 9999999999999999999999999998643221111222
Q ss_pred cccccccCccCccccCC-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 905 TDLVGTLGYIPPEYGQA-------SVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 905 ~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
....++..|+|||+... ..++.++||||||+++|||++ |..||...... .... ..... ......+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~~---~~~~~-~~~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR---EVLN---HVIKD-QQVKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH---HHHH---HHHhh-cccccCC
Confidence 34567889999998643 245789999999999999997 57787643221 1111 11111 1112222
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
+.+...+. ..+.+++..|| .+|++||+++++++.|.
T Consensus 232 ~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 32222222 35778899999 67999999999999874
No 229
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2e-33 Score=305.41 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=200.4
Q ss_pred CCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCc------hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDC------GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
+|++.+.||+|+||.||+|...+++.+|+|.+.... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 478899999999999999998889999999886432 11234688899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++++|.+++.+. ..+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.++++|||.++...
T Consensus 81 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNRF----GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 9999999999998764 3578899999999999999999998 99999999999999999999999999987653
Q ss_pred CCCC----cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh-ccc
Q 035998 897 SPYD----THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE-NRE 971 (1020)
Q Consensus 897 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~ 971 (1020)
.... ........++..|+|||+..+..++.++||||+|+++|+|++|+.||....... . ....... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~----~~~~~~~~~~~ 227 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA--A----MFYIGAHRGLM 227 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH--H----HHHhhhccCCC
Confidence 2111 111223568889999999999899999999999999999999999996432111 1 1111111 111
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. ... .....+.+++.+||+.+|.+||++.++++
T Consensus 228 ~~-----~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 PR-----LPD----SFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CC-----CCC----CCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11 111 12245789999999999999999999875
No 230
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1e-33 Score=306.03 Aligned_cols=250 Identities=27% Similarity=0.425 Sum_probs=203.7
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC-CCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD-GRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
.++|+..+.||+|+||.||+|...+ ++.||+|.+..... .+++.+|++++++++||||+++++++.+....++++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 3578999999999999999999764 78999999876533 56899999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||++.......
T Consensus 80 ~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 80 CGAGSVSDIMKIT---NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred CCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 9999999998653 24689999999999999999999999 99999999999999999999999999998764322
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......++..|+|||++.+..++.++||||||+++|+|++|+.||....+... . .... ......
T Consensus 154 --~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~---~---~~~~-~~~~~~------ 218 (256)
T cd06612 154 --AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA---I---FMIP-NKPPPT------ 218 (256)
T ss_pred --cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh---h---hhhc-cCCCCC------
Confidence 122334578899999999888999999999999999999999999974322111 0 0000 000000
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...+......+.+++.+||+.+|.+||+++|+++
T Consensus 219 -~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 219 -LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred -CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0011122246889999999999999999999986
No 231
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.3e-34 Score=308.28 Aligned_cols=254 Identities=27% Similarity=0.426 Sum_probs=205.0
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
.++|++.+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++.+....+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 357899999999999999999864 5788999999876555567889999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||.+.......
T Consensus 82 ~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 82 CGGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred CCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 9999999988753 24688999999999999999999999 99999999999999999999999999987653321
Q ss_pred CcccccccccccCccCccccCCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQAS---VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
.......++..|+|||..... .++.++||||+|+++|||++|+.||....+... .......... .
T Consensus 156 --~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~------~~~~~~~~~~----~ 223 (262)
T cd06613 156 --AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA------LFLISKSNFP----P 223 (262)
T ss_pred --hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhccCC----C
Confidence 122345678899999998776 889999999999999999999999975432111 1111111000 0
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+.. .........+.+++.+||+.+|.+||++++++.
T Consensus 224 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 224 PKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred ccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 112233456889999999999999999999975
No 232
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.3e-34 Score=324.12 Aligned_cols=238 Identities=28% Similarity=0.370 Sum_probs=187.3
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHH-HHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVE-ALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999864 68999999987542 122234555554 46778999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~ 151 (325)
T cd05604 81 GELFFHLQRE----RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SD 151 (325)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CC
Confidence 9998887653 4688999999999999999999999 9999999999999999999999999998754221 12
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...... .......... ....+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~------~~~~~~~~~~---~~~~~----- 217 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA------EMYDNILHKP---LVLRP----- 217 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH------HHHHHHHcCC---ccCCC-----
Confidence 223457899999999999999999999999999999999999999643211 1111111110 00111
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQQ 1011 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~e 1011 (1020)
.....+.+++.+|++.+|.+||++++
T Consensus 218 ---~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 218 ---GASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred ---CCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 12235778999999999999998763
No 233
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.9e-34 Score=334.38 Aligned_cols=263 Identities=21% Similarity=0.268 Sum_probs=192.1
Q ss_pred HHhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCC------CccceEeeEEecc
Q 035998 738 LESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQH------PNLVHLQGYCMHK 810 (1020)
Q Consensus 738 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~~ 810 (1020)
...+++|++.++||+|+||.||+|... .++.||||+++... ...+++..|++++++++| .+++++++++...
T Consensus 125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 345688999999999999999999864 57889999986532 223456678888877754 4588898888765
Q ss_pred -CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-cCCCCeEecCCCCCCEEEcCCC------
Q 035998 811 -NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-SCEPHILHRDIKSSNILLDGNF------ 882 (1020)
Q Consensus 811 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~------ 882 (1020)
...++|||++ +++|.+++.+. ..+++..+..++.||+.||+|||+ . +||||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKH----GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccccc
Confidence 4678999988 67888877654 468999999999999999999997 5 899999999999998765
Q ss_pred ----------CeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 035998 883 ----------GAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKP 952 (1020)
Q Consensus 883 ----------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~ 952 (1020)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~ 350 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN 350 (467)
T ss_pred cccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 49999999876431 223346789999999999999999999999999999999999999975433
Q ss_pred CCcccHHHHHHH-----------------HH-hhcccccccCcccc-----Ccc--CHHHHHHHHHHHhhccCCCCCCCC
Q 035998 953 KGSRDLISWVIR-----------------MR-QENRESEVLDPFIY-----DKQ--HDKEMLRVLDIACLCLSESPKVRP 1007 (1020)
Q Consensus 953 ~~~~~~~~~~~~-----------------~~-~~~~~~~~~d~~~~-----~~~--~~~~~~~l~~li~~cl~~dP~~RP 1007 (1020)
.+....+..... .. .........++... ... .......+.+|+.+||++||++||
T Consensus 351 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 351 LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 211111111000 00 00000000000000 000 001123577999999999999999
Q ss_pred CHHHHHH
Q 035998 1008 TTQQLVS 1014 (1020)
Q Consensus 1008 s~~evl~ 1014 (1020)
|++|+++
T Consensus 431 ta~e~L~ 437 (467)
T PTZ00284 431 NARQMTT 437 (467)
T ss_pred CHHHHhc
Confidence 9999987
No 234
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.4e-34 Score=319.74 Aligned_cols=254 Identities=24% Similarity=0.261 Sum_probs=194.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47899999999999999999865 68899999986421 122345788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++.+. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 999999999998753 24588999999999999999999999 999999999999999999999999999876533
Q ss_pred CCCcccccccccccCccCccccCC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQA-----SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
.. ........||+.|+|||++.. ..++.++||||+||++|||++|+.||..... ......+.......
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~------~~~~~~i~~~~~~~ 227 (331)
T cd05597 155 DG-TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKEHF 227 (331)
T ss_pred CC-CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH------HHHHHHHHcCCCcc
Confidence 21 112223468999999998763 4578899999999999999999999964321 11111111111100
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCC--CCCCHHHHHH
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPK--VRPTTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~ 1014 (1020)
.... . .......+.+++.+|+..++. .||+++++++
T Consensus 228 ~~~~--~----~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 228 QFPP--D----VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred cCCC--c----cCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 1000 0 011223567888887765443 3889999876
No 235
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.9e-34 Score=312.60 Aligned_cols=250 Identities=23% Similarity=0.382 Sum_probs=203.0
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..+|++.+.||.|++|.||+|.. .+++.||+|.+........+.+.+|++.++.++|||++++++++...+..++|+||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 35689999999999999999985 47899999998765544556788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|..++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 98 LAGGSLTDVVTET-----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred cCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 9999999988643 578999999999999999999999 99999999999999999999999999987653321
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......++..|+|||...+..++.++|||||||++|+|++|+.||....... ........ .......+
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~------~~~~~~~~-~~~~~~~~-- 238 (296)
T cd06655 170 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR------ALYLIATN-GTPELQNP-- 238 (296)
T ss_pred --ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhc-CCcccCCc--
Confidence 11233467889999999988889999999999999999999999996533211 11111111 11111111
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......+.+++.+||..||.+||++.+++.
T Consensus 239 -----~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 239 -----EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -----ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 112235788999999999999999999986
No 236
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.6e-33 Score=305.08 Aligned_cols=257 Identities=23% Similarity=0.340 Sum_probs=199.9
Q ss_pred HHhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 738 LESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 738 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
..+++++.....||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++|+||+++++++...+..++|
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 345566666788999999999999854 6788999998876655667899999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC-CCCeEEeeccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG-NFGAHLADFGLARLI 895 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~ 895 (1020)
+||+++++|.+++..... ....++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|||.+...
T Consensus 84 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 84 MEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 999999999999875421 11227888899999999999999998 9999999999999986 678999999998765
Q ss_pred cCCCCcccccccccccCccCccccCCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQAS--VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESE 973 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1020)
.... .......+++.|+|||+.... .++.++||||+|+++|+|++|+.||........ ..+...... .
T Consensus 160 ~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~~~~~--~--- 229 (268)
T cd06624 160 AGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKVGMFK--I--- 229 (268)
T ss_pred ccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhhhhhc--c---
Confidence 3211 112234578899999987654 378899999999999999999999964322111 111110000 0
Q ss_pred ccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 974 VLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 974 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+. .+.....++.+++.+||+.+|.+||++.|+++
T Consensus 230 --~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 --HPE----IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --CCC----CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 010 11122245789999999999999999999986
No 237
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1e-33 Score=308.05 Aligned_cols=249 Identities=25% Similarity=0.437 Sum_probs=199.5
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchh---------hHHHHHHHHHHHHHcCCCccceEeeEEeccCc
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQ---------MEREFRAEVEALSRAQHPNLVHLQGYCMHKND 812 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 812 (1020)
+|.+.+.||+|++|.||+|... +++.||+|.+...... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778899999999999999864 6789999988654321 22468889999999999999999999999999
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLA 892 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 892 (1020)
.++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY----GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 99999999999999999764 4578889999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCc----ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh
Q 035998 893 RLILSPYDT----HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE 968 (1020)
Q Consensus 893 ~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 968 (1020)
+........ .......|+..|+|||...+..++.++||||+|+++|+|++|+.||...... ........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~- 226 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL------QAIFKIGE- 226 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH------HHHHHHhc-
Confidence 876432111 1112345788999999998888999999999999999999999999753211 11111111
Q ss_pred cccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 NRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ..+. .+......+.+++.+||+.||.+||++.|+++
T Consensus 227 ~-----~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 N-----ASPE----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c-----CCCc----CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0 0111 11122346889999999999999999999986
No 238
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.7e-33 Score=310.65 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=201.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
.+.|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|++++++++|||++++++++..+...++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 356899999999999999999875 5889999999876655567788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
++++++..++.+. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 91 ~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~- 163 (292)
T cd06644 91 CPGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT- 163 (292)
T ss_pred CCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc-
Confidence 9999998887653 23588999999999999999999998 9999999999999999999999999998754322
Q ss_pred CcccccccccccCccCccccC-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQ-----ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
........+++.|+|||++. ...++.++|||||||++|||++|..||..... ........... ....
T Consensus 164 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~-~~~~ 235 (292)
T cd06644 164 -LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSE-PPTL 235 (292)
T ss_pred -ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH------HHHHHHHhcCC-CccC
Confidence 11223456788999999874 34578899999999999999999999864322 11111111111 1111
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. +......+.+++.+||+.+|++||++.++++
T Consensus 236 ~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 SQ-------PSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CC-------CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11 1122235789999999999999999999986
No 239
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.7e-34 Score=328.10 Aligned_cols=252 Identities=25% Similarity=0.317 Sum_probs=195.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|+..+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|++++..++||+|+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999865 68899999987432 223356788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMKK----DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 999999999998754 4688999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCc---------------------------------ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCC
Q 035998 898 PYDT---------------------------------HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGK 944 (1020)
Q Consensus 898 ~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~ 944 (1020)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 1100 0112357899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 035998 945 RPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT---TQQLVS 1014 (1020)
Q Consensus 945 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1014 (1020)
.||....+... ...+........ ..+.. .....+.+++.+|+. ||.+|++ ++|+++
T Consensus 234 ~Pf~~~~~~~~------~~~i~~~~~~~~-~p~~~------~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 234 PPFCSETPQET------YRKVMNWKETLV-FPPEV------PISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCCCHHHH------HHHHHcCCCcee-cCCCC------CCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 99975432211 111111000000 00000 012356778878764 9999985 566654
No 240
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.9e-33 Score=307.35 Aligned_cols=258 Identities=24% Similarity=0.405 Sum_probs=204.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC------CCCEEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEeccCceE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP------DGRNVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 814 (1020)
++|++.+.||+|+||.||+|+.+ +.+.||+|.+...... ....+.+|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888999999999999999864 3467999988765433 4467899999999999999999999999989999
Q ss_pred EEEEeccCCChhhhhhhcCCC-----CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 815 LIYSFMENGSLDYWLHEKLDG-----PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
+||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999999765322 12689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhh
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQE 968 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 968 (1020)
|+++...... ........++..|+|||...+..++.++||||+|+++|+|++ |..||...... .... ....
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---~~~~---~~~~- 233 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---EVLN---RLQA- 233 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH---HHHH---HHHc-
Confidence 9987543221 112223456778999999888889999999999999999999 88898643221 1111 1111
Q ss_pred cccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 969 NRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 969 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
..... .. .......+.+++.+||+.+|++||++.|+++.|++
T Consensus 234 ~~~~~-~~-------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 234 GKLEL-PV-------PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CCcCC-CC-------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 11000 00 11122468899999999999999999999998863
No 241
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.1e-34 Score=324.51 Aligned_cols=260 Identities=22% Similarity=0.270 Sum_probs=195.1
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc------
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK------ 810 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 810 (1020)
..++|++.+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 3568999999999999999999854 68899999987542 22345677899999999999999999988643
Q ss_pred CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
...++||||+++ ++..++.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 346899999976 55555542 378889999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH-----
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM----- 965 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~----- 965 (1020)
+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ........
T Consensus 165 ~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~ 239 (355)
T cd07874 165 LARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ--WNKVIEQLGTPCP 239 (355)
T ss_pred ccccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCH
Confidence 99865322 222345789999999999999999999999999999999999999975321110 00000000
Q ss_pred -------------Hhh-cccccccCccc-----c---CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 966 -------------RQE-NRESEVLDPFI-----Y---DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 966 -------------~~~-~~~~~~~d~~~-----~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
... ........+.. . ..........+.+++.+|++.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 000 00000000000 0 0001112346789999999999999999999987
No 242
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1e-33 Score=316.25 Aligned_cols=198 Identities=28% Similarity=0.414 Sum_probs=161.3
Q ss_pred CCeeeccCCeEEEEEEeC---CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEec--cCceEEEEEecc
Q 035998 747 ANIIGCGGFGLVYRATLP---DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMH--KNDRLLIYSFME 821 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 821 (1020)
.++||+|+||.||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 46789999987542 23457789999999999999999999864 345789999986
Q ss_pred CCChhhhhhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEE----cCCCCeEEeecccc
Q 035998 822 NGSLDYWLHEKL-----DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILL----DGNFGAHLADFGLA 892 (1020)
Q Consensus 822 ~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~~ 892 (1020)
+ +|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5 7777765321 1233588999999999999999999999 99999999999999 45678999999999
Q ss_pred ccccCCCCc-ccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 035998 893 RLILSPYDT-HVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMC 950 (1020)
Q Consensus 893 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~ 950 (1020)
+........ .......||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 876433211 12234678999999998876 46899999999999999999999999643
No 243
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-33 Score=309.97 Aligned_cols=253 Identities=23% Similarity=0.407 Sum_probs=199.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++......++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36888999999999999999875 78999999887542 23345788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|..++.... ....+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+|++|||.+......
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999998887532 2346899999999999999999999632 8999999999999999999999999998765322
Q ss_pred CcccccccccccCccCccccCCC------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQAS------VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESE 973 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1020)
......++..|+|||.+.+. .++.++|+||+||++|+|++|+.||........ ......... .....
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~-~~~~~ 229 (286)
T cd06622 157 ---LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI---FAQLSAIVD-GDPPT 229 (286)
T ss_pred ---ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH---HHHHHHHhh-cCCCC
Confidence 22334678899999987544 358899999999999999999999964322111 111111111 11000
Q ss_pred ccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 974 VLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 974 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+......+.+++.+||+.+|++||+++++++
T Consensus 230 ---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 230 ---------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ---------CCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 11123346789999999999999999999987
No 244
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=9.5e-34 Score=309.42 Aligned_cols=257 Identities=28% Similarity=0.456 Sum_probs=199.3
Q ss_pred CCcCCeeeccCCeEEEEEEeC----CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC------
Q 035998 744 FDQANIIGCGGFGLVYRATLP----DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN------ 811 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 811 (1020)
|++.+.||+|+||.||+|.+. +++.||||++.... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999753 36789999987643 233557889999999999999999999886542
Q ss_pred ceEEEEEeccCCChhhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 812 DRLLIYSFMENGSLDYWLHEKL--DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
..++++||+++|+|..++.... .....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2368899999999998875332 1223578899999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhh
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQE 968 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 968 (1020)
|.++...............+++.|++||......++.++||||+|+++|||++ |+.||...... +... .....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~---~~~~~ 231 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYN---YLIKG 231 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHH---HHHcC
Confidence 99987643222222223345678999999988889999999999999999999 88988643221 1111 11111
Q ss_pred cccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 969 NRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 969 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.... . .+.....+.+++.+||+.+|++||++.++++.|+++
T Consensus 232 ~~~~---~-------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NRLK---Q-------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CcCC---C-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1100 0 011234688999999999999999999999999876
No 245
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.3e-33 Score=310.43 Aligned_cols=262 Identities=25% Similarity=0.313 Sum_probs=196.9
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|++|.||+|+.+ +++.||+|++.... ....+.+.+|++++++++|||++++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999865 68899999986542 22345688899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
++ ++|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....+.
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 58888876542 235689999999999999999999999 99999999999999999999999999997653321
Q ss_pred CcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh--c-------
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE--N------- 969 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~------- 969 (1020)
.......+++.|+|||++.+ ..++.++||||+|+++|||+||+.||....... ............ .
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 156 --RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID--QLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred --ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhcchh
Confidence 12233466889999998765 457899999999999999999999997432211 111100000000 0
Q ss_pred ------ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 ------RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 ------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......... .........++.+++.+||+.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 232 LPDYKNTFPKWKKGSL-RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hHHHHhhccccCcchh-HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000 0000112245779999999999999999999975
No 246
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.3e-33 Score=306.66 Aligned_cols=249 Identities=25% Similarity=0.406 Sum_probs=198.3
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++|||++++++++......++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 677889999999999999875 4778899998765555556788999999999999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
++|..++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++...... .
T Consensus 87 ~~l~~~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~ 158 (282)
T cd06643 87 GAVDAVMLEL---ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--Q 158 (282)
T ss_pred CcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc--c
Confidence 9998887643 24689999999999999999999999 99999999999999999999999999987653221 1
Q ss_pred cccccccccCccCccccC-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQ-----ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
......++..|+|||++. +..++.++||||+||++|||++|+.||...... ........... .....+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~~~~-~~~~~~ 231 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM------RVLLKIAKSEP-PTLAQP 231 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH------HHHHHHhhcCC-CCCCCc
Confidence 223356889999999873 456788999999999999999999999643221 11111111110 011111
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......+.+++.+||+.+|.+||++.++++
T Consensus 232 -------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 232 -------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112246889999999999999999999986
No 247
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=8.3e-34 Score=306.98 Aligned_cols=240 Identities=20% Similarity=0.402 Sum_probs=189.3
Q ss_pred CeeeccCCeEEEEEEeCC--------CCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 748 NIIGCGGFGLVYRATLPD--------GRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++|||++++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999997532 234888888665545556788899999999999999999999998999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC--------eEEeeccc
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG--------AHLADFGL 891 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~Dfg~ 891 (1020)
+++|+|..+++.. ...+++..+..++.||+.|++|||+. +|+||||||+||+++.++. ++++|||.
T Consensus 81 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999998764 23678999999999999999999999 9999999999999987765 69999998
Q ss_pred cccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCC-CCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGK-RPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
+..... .....++..|+|||++.+ ..++.++||||+|+++|||++|. .||...... ..........
T Consensus 155 ~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~------~~~~~~~~~~ 222 (258)
T cd05078 155 SITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ------KKLQFYEDRH 222 (258)
T ss_pred ccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH------HHHHHHHccc
Confidence 865432 123457889999998876 45899999999999999999985 555432211 1111111100
Q ss_pred ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 970 RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 970 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
.. +......+.+++.+||+.||++|||++++++.|+
T Consensus 223 ---~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 223 ---QL---------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ---cC---------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 1111235889999999999999999999999874
No 248
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.5e-33 Score=310.85 Aligned_cols=263 Identities=27% Similarity=0.412 Sum_probs=206.0
Q ss_pred ccHHHHHHhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEec
Q 035998 732 ISIDDILESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMH 809 (1020)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 809 (1020)
++++++..+.++|++.+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 455666777899999999999999999999864 68899999986542 2245678899999999 89999999999875
Q ss_pred c-----CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCe
Q 035998 810 K-----NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGA 884 (1020)
Q Consensus 810 ~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 884 (1020)
. ...++||||+++++|.++++........+++..++.++.|++.||+|||+. +++||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCE
Confidence 4 357899999999999998876544455789999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccccCCCCcccccccccccCccCccccCCC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHH
Q 035998 885 HLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQAS-----VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLI 959 (1020)
Q Consensus 885 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~ 959 (1020)
|++|||.++...... .......++..|+|||.+... .++.++||||+||++|||++|+.||.......
T Consensus 168 kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~----- 240 (291)
T cd06639 168 KLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK----- 240 (291)
T ss_pred EEeecccchhccccc--ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-----
Confidence 999999988654321 112334678899999987543 36889999999999999999999996432211
Q ss_pred HHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 960 SWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 960 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........ ......++ ......+.+++.+||+.+|++||++.|+++
T Consensus 241 -~~~~~~~~-~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 241 -TLFKIPRN-PPPTLLHP-------EKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -HHHHHhcC-CCCCCCcc-------cccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111111 11111111 112235889999999999999999999986
No 249
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=6.4e-37 Score=330.81 Aligned_cols=367 Identities=24% Similarity=0.307 Sum_probs=245.6
Q ss_pred ccEEEccCCCCC-CCCCCccccccccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEcc
Q 035998 183 IRVINLSVNYFS-GTLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVS 261 (1020)
Q Consensus 183 L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 261 (1020)
.+-.|+++|.++ +..|.....+++++.|.|...++. .+|+.++.+++|++|.+++|++. .+-..++.|+.|+.+++.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhh
Confidence 445566666666 356666666777777777777766 56777777777777777777776 445566666667777776
Q ss_pred CCcCcc-cCcccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCC
Q 035998 262 SNNFSG-NIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGP 340 (1020)
Q Consensus 262 ~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 340 (1020)
+|++.. -+|..+-.+..|+.|+|++|+++ ..|..+.. .+++-.|+||+|+|..+
T Consensus 87 ~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~------------------------AKn~iVLNLS~N~IetI 141 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEY------------------------AKNSIVLNLSYNNIETI 141 (1255)
T ss_pred ccccccCCCCchhcccccceeeecchhhhh-hcchhhhh------------------------hcCcEEEEcccCccccC
Confidence 666642 12333334444444444444444 33444444 44455555555555422
Q ss_pred CCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCcchhhHHHHHhhhcccchhhhhccccCCCCCCCcc
Q 035998 341 LPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIYNLSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPR 420 (1020)
Q Consensus 341 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~ 420 (1020)
+-.-|.++..|-.||||+|++. ..|..+..+..|++|+|++|++..+. +..+..+++|+.|++
T Consensus 142 Pn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQ--LrQLPsmtsL~vLhm-------------- 204 (1255)
T KOG0444|consen 142 PNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQ--LRQLPSMTSLSVLHM-------------- 204 (1255)
T ss_pred CchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHH--HhcCccchhhhhhhc--------------
Confidence 2223344555555555555554 34444555555555555555543211 111222222222222
Q ss_pred ccccCceEEEeccccc-ccccchhhhcCCCCcEEecccccccccccccccCcCcCcEEeCCCCcccccCCCCCCCCcccc
Q 035998 421 LHFANLKVLVIASCGL-RGSIPQWLRGCSKLQLVDLSWNQLSGTIPVWFGGFQDLFYLDLSNNTFTGEIPKNLTGLPSLI 499 (1020)
Q Consensus 421 ~~~~~L~~L~l~~n~l-~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 499 (1020)
++.+- ...+|..+.++.+|..+|||.|.|. .+|+.+..+.+|+.|+||+|+|+ ++.-..+.-
T Consensus 205 -----------s~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W---- 267 (1255)
T KOG0444|consen 205 -----------SNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEW---- 267 (1255)
T ss_pred -----------ccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHH----
Confidence 22211 2367888999999999999999998 89999999999999999999998 333333222
Q ss_pred cccCcCCCCCCCcccceeecccccccccccccCCCCeeecccCccccCCCccccCCCcceEEEecCCccee-ccCccccC
Q 035998 500 TRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSG-PIPSELTG 578 (1020)
Q Consensus 500 ~l~~s~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~-~~p~~~~~ 578 (1020)
.-..+|+||.|+++ .+|.++..|++|+.|++.+|+|+- -||+.++.
T Consensus 268 --------------------------------~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGK 314 (1255)
T KOG0444|consen 268 --------------------------------ENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGK 314 (1255)
T ss_pred --------------------------------hhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhh
Confidence 22346777888887 588999999999999999999863 59999999
Q ss_pred CCcccEEEccCCcccccCCccccccccccccccccccccccCCCCCCCCCcCCccccCCC-CCCCCC
Q 035998 579 MTSLETLDLSYNNLSGAIPISLEKLSFLSKFSVANNHLTGRIPSGGQFQTFPNSSFDGNN-LCGEHR 644 (1020)
Q Consensus 579 l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~-l~~~~~ 644 (1020)
|.+|+.+..++|+|. .+|++++.+..|+.|.|++|+|-..+-....+..+..+.+..|+ |-.||.
T Consensus 315 L~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 315 LIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred hhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcCccCCCC
Confidence 999999999999998 99999999999999999999998766556667788889999997 666544
No 250
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.3e-33 Score=315.76 Aligned_cols=237 Identities=25% Similarity=0.326 Sum_probs=186.3
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHH-HHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVE-ALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
++||+|+||.||+|+.. +++.||+|++..... .....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 688999999875421 12234445544 57888999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
++|..++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~ 151 (321)
T cd05603 81 GELFFHLQRE----RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--E 151 (321)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--C
Confidence 9998887653 4578889999999999999999999 99999999999999999999999999987542221 2
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+... .. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~-~~-~--------- 214 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV------SQMYDNILHK-PL-Q--------- 214 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH------HHHHHHHhcC-CC-C---------
Confidence 23345789999999999998999999999999999999999999964321 1111111111 00 0
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQ 1010 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1010 (1020)
.+......+.+++.+|++.||.+||++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 215 LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 0111223578999999999999999764
No 251
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.6e-33 Score=304.53 Aligned_cols=250 Identities=27% Similarity=0.402 Sum_probs=203.1
Q ss_pred CCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|+..+.||+|+||.||.++. .+++.|++|.+.... ....+.+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 588899999999999999975 468899999876542 33345788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||++++++.+|++|||.++......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999987642 34678999999999999999999998 99999999999999999999999999998664322
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......+++.|+|||...+..++.++||||+|+++|||++|..||...... ........... ...
T Consensus 156 --~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~~~~~-~~~----- 221 (256)
T cd08221 156 --SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL------NLVVKIVQGNY-TPV----- 221 (256)
T ss_pred --ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCC-CCC-----
Confidence 1223456889999999998888999999999999999999999999643211 11111111111 100
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
.......+.+++.+||+.+|.+||+++++++.
T Consensus 222 ----~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 222 ----VSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ----ccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 11223468899999999999999999999874
No 252
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.7e-34 Score=309.97 Aligned_cols=253 Identities=26% Similarity=0.432 Sum_probs=198.4
Q ss_pred HhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEecc------
Q 035998 739 ESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMHK------ 810 (1020)
Q Consensus 739 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------ 810 (1020)
++++.|++.+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.+++++ +|||++++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45677889999999999999999864 68899999987543 3345788899999998 799999999998753
Q ss_pred CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
...++||||+++++|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCC
Confidence 3578999999999999998763 234688999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccCccCccccC-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYGQ-----ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
+++..... ........|+..|+|||++. ...++.++||||+||++|||++|+.||...... .... ..
T Consensus 157 ~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-----~~~~-~~ 228 (272)
T cd06637 157 VSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RALF-LI 228 (272)
T ss_pred Cceecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-----HHHH-HH
Confidence 98765321 12233456889999999875 346788999999999999999999999643221 1111 11
Q ss_pred HhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 966 RQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. .. .+.... ......+.+++.+||+.+|.+||+++++++
T Consensus 229 ~~-~~-----~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 229 PR-NP-----APRLKS---KKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred hc-CC-----CCCCCC---CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 11 10 011111 112235789999999999999999999976
No 253
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.3e-33 Score=316.46 Aligned_cols=262 Identities=21% Similarity=0.296 Sum_probs=194.2
Q ss_pred cCCeeecc--CCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 746 QANIIGCG--GFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 746 ~~~~lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
+.++||+| +|++||+++. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 7889999976 478999999987543 233456788999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+........
T Consensus 82 ~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 9999999986542 23588999999999999999999999 999999999999999999999999987654322111
Q ss_pred c-----ccccccccccCccCccccCC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHh------
Q 035998 901 T-----HVTTDLVGTLGYIPPEYGQA--SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQ------ 967 (1020)
Q Consensus 901 ~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~------ 967 (1020)
. .......++..|+|||++.+ ..++.++||||+||++|||++|+.||........ ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLLDTT 234 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHHhcCCcccccccc
Confidence 1 01122356778999999865 4688999999999999999999999975332110 0000000000
Q ss_pred ----h----cccccccCccc-----------------cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 968 ----E----NRESEVLDPFI-----------------YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 968 ----~----~~~~~~~d~~~-----------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. .......+... ...........+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0 00000000000 00011122346889999999999999999999987
No 254
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.3e-33 Score=305.83 Aligned_cols=238 Identities=24% Similarity=0.442 Sum_probs=190.1
Q ss_pred CeeeccCCeEEEEEEeCCCC-----------EEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 748 NIIGCGGFGLVYRATLPDGR-----------NVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
+.||+|+||.||+|...+.. .|++|.+...... ...+.+|++++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46899999999999875432 5788887655433 5778899999999999999999999988 778999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC-------CeEEeec
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF-------GAHLADF 889 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-------~~kl~Df 889 (1020)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+|++||
T Consensus 79 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 79 EEYVKFGPLDVFLHREK---NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEcCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCC
Confidence 99999999999988642 2688999999999999999999998 999999999999999887 7999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCCC--CCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHH
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQAS--VATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMR 966 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 966 (1020)
|+++.... .....++..|+|||++.+. .++.++||||+|+++|||++ |..||......+ ...+ ..
T Consensus 153 g~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~---~~~~---~~ 220 (259)
T cd05037 153 GIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE---KERF---YQ 220 (259)
T ss_pred Cccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh---HHHH---Hh
Confidence 99986532 1223566789999998776 78999999999999999999 577776543211 1111 11
Q ss_pred hhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 967 QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 967 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
... ....+ ....+.+++.+||..+|.+||++.++++.|+
T Consensus 221 ~~~---~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 DQH---RLPMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred cCC---CCCCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 100 00010 0146889999999999999999999999874
No 255
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.7e-33 Score=302.00 Aligned_cols=247 Identities=28% Similarity=0.443 Sum_probs=199.8
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-----hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-----GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
+|+..+.||+|++|.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778899999999999999876 78999999886533 22446788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
+||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKKY----GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 9999999999998754 3578999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCcccccccccccCccCccccCCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASV-ATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
... ......++..|+|||...... ++.++|+||+|+++|+|++|+.||..... ...............
T Consensus 154 ~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~-- 222 (258)
T cd06632 154 EFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG------VAAVFKIGRSKELPP-- 222 (258)
T ss_pred ccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH------HHHHHHHHhcccCCC--
Confidence 322 223456788999999887766 89999999999999999999999975431 111111111011111
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+ +......+.+++.+||+.+|.+||++.++++
T Consensus 223 ---~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 ---I----PDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ---c----CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0 1112245788999999999999999999985
No 256
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.8e-33 Score=306.46 Aligned_cols=255 Identities=22% Similarity=0.363 Sum_probs=202.3
Q ss_pred CCCcCCeeeccCCeEEEEEEeCC--CCEEEEEEecCCc----------hhhHHHHHHHHHHHHH-cCCCccceEeeEEec
Q 035998 743 NFDQANIIGCGGFGLVYRATLPD--GRNVAIKRLSGDC----------GQMEREFRAEVEALSR-AQHPNLVHLQGYCMH 809 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 809 (1020)
+|++.+.||+|+||.||+|..+. ++.+|+|.+.... .....++.+|++++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999764 6889999875321 2233456778888875 699999999999999
Q ss_pred cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-cCCCCeEecCCCCCCEEEcCCCCeEEee
Q 035998 810 KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-SCEPHILHRDIKSSNILLDGNFGAHLAD 888 (1020)
Q Consensus 810 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~D 888 (1020)
.+..++||||+++++|.+++.........+++..++.++.|++.|+.|||+ . +++||||+|+||+++.++.+|++|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 999999999999999999886644445678999999999999999999996 5 899999999999999999999999
Q ss_pred ccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh
Q 035998 889 FGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE 968 (1020)
Q Consensus 889 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 968 (1020)
||.+....... ......++..|+|||...+..++.++||||||+++|||++|+.||..... ..........
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~------~~~~~~~~~~ 228 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM------LSLATKIVEA 228 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH------HHHHHHHhhc
Confidence 99998654322 23345688899999999888899999999999999999999999863321 1111111111
Q ss_pred cccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 969 NRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 969 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
.. . +.... .....+.+++.+||+.||++||++.|+.+++++
T Consensus 229 ~~-~----~~~~~----~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 229 VY-E----PLPEG----MYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred cC-C----cCCcc----cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 11 0 10000 112468899999999999999999999998863
No 257
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.6e-33 Score=320.59 Aligned_cols=261 Identities=21% Similarity=0.272 Sum_probs=194.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc------C
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK------N 811 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 811 (1020)
.++|++.+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 468999999999999999999864 68899999987542 23345678899999999999999999987643 3
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..++||||+++ ++..++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 46899999976 56666542 367889999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHH-----------
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLIS----------- 960 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~----------- 960 (1020)
++..... .......++..|+|||++.+..++.++||||+||++|||++|+.||......+....+.
T Consensus 173 a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 173 ARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred ccccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9865321 22234578999999999999999999999999999999999999997543211100000
Q ss_pred -HHH----HHHhhccc-c-----cccCcccc---CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 961 -WVI----RMRQENRE-S-----EVLDPFIY---DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 961 -~~~----~~~~~~~~-~-----~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
... ........ . ........ ..........+.+++.+|++.||.+|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 00000000 0 00000000 0001112235789999999999999999999987
No 258
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-33 Score=308.99 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=203.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46788899999999999999865 68899999876543 34456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|..++... ..+++..+..++.+++.|+.|||+.. +++||||||+||+++.++.++++|||++......
T Consensus 85 ~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 85 MDCGSLDRIYKKG----GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred CCCCCHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 9999999888653 46899999999999999999999631 8999999999999999999999999998754221
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcc-----cHHHHHHHHHhhcccccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSR-----DLISWVIRMRQENRESEV 974 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 974 (1020)
......|+..|+|||++.+..++.++||||+||++|+|++|+.||......+.. ..............
T Consensus 158 ---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 230 (284)
T cd06620 158 ---IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP---- 230 (284)
T ss_pred ---ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC----
Confidence 122356889999999988889999999999999999999999999854432111 11111111111110
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
+.+. .......+.+++.+|++.||++||+++|+++.
T Consensus 231 --~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 231 --PRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred --CCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 01123468899999999999999999999874
No 259
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.3e-33 Score=307.56 Aligned_cols=252 Identities=26% Similarity=0.411 Sum_probs=202.5
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
.++|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 456899999999999999999864 6889999999766555567788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||.+.......
T Consensus 84 ~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 84 CDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred cCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 9999999988753 24689999999999999999999999 99999999999999999999999999987653221
Q ss_pred CcccccccccccCccCccccC-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQ-----ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.......+++.|+|||.+. ...++.++||||+|+++|||++|+.||...... .......... ....
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~ 228 (280)
T cd06611 158 --QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM------RVLLKILKSE-PPTL 228 (280)
T ss_pred --cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH------HHHHHHhcCC-CCCc
Confidence 1223356888999999864 345778999999999999999999999753221 1111111110 0010
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. +......+.+++.+||+.+|.+||++.++++
T Consensus 229 ~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 229 DQ-------PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred CC-------cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 00 1112235789999999999999999999987
No 260
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.1e-33 Score=304.47 Aligned_cols=253 Identities=24% Similarity=0.424 Sum_probs=201.2
Q ss_pred CCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc------hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEE
Q 035998 743 NFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC------GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 815 (1020)
+|+..+.||+|++|.||+|.. .+++.||+|++.... ....+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999985 578999999986533 1234678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC-CeEEeecccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF-GAHLADFGLARL 894 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~~~~ 894 (1020)
||||+++++|.+++.+. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++ .+|++|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY----GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 99999999999998754 4678999999999999999999999 999999999999998776 599999999987
Q ss_pred ccCCCCc--ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 895 ILSPYDT--HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 895 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
....... .......++..|+|||...+..++.++||||+|+++|+|++|..||.......... ...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~- 229 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA---LIFKIASATTA- 229 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH---HHHHHhccCCC-
Confidence 6443111 11223467889999999988889999999999999999999999996433221111 11111111100
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...+......+.+++.+|++.+|.+||++.+++.
T Consensus 230 --------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 230 --------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1112223346889999999999999999999975
No 261
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.5e-33 Score=308.00 Aligned_cols=248 Identities=29% Similarity=0.422 Sum_probs=202.3
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.+.||.|++|.||+|... +++.||+|.+.... ......+.+|++++++++|+|++++++++.+....++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888899999999999999865 68899999987553 33345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||.++......
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 9999999988753 688999999999999999999998 99999999999999999999999999998764332
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......+++.|+|||+..+..++.++||||||+++|+|+||+.||....+.. ....... .......
T Consensus 153 --~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~------~~~~~~~-~~~~~~~---- 219 (274)
T cd06609 153 --SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR------VLFLIPK-NNPPSLE---- 219 (274)
T ss_pred --cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH------HHHHhhh-cCCCCCc----
Confidence 22234567889999999988889999999999999999999999997543211 1111111 1111111
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. .....+.+++.+||+.+|++||+++++++
T Consensus 220 -~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 -GN---KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -cc---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 11 02235789999999999999999999986
No 262
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-34 Score=317.85 Aligned_cols=241 Identities=25% Similarity=0.438 Sum_probs=194.2
Q ss_pred cCCeeeccCCeEEEEEEeC-CCCEEEE---EEecC-CchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCc--eEEEEE
Q 035998 746 QANIIGCGGFGLVYRATLP-DGRNVAI---KRLSG-DCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKND--RLLIYS 818 (1020)
Q Consensus 746 ~~~~lg~G~~g~V~~~~~~-~~~~vav---K~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e 818 (1020)
...+||+|+|-+||+|... +|..||= |.-.. ..+...+.|..|+++++.|+||||+++|.++.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 4567999999999999864 4666652 22111 113334679999999999999999999999987665 678999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC-CCCeEEeeccccccccC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG-NFGAHLADFGLARLILS 897 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~~~ 897 (1020)
.|..|+|..|.++. +.++......|++||++||.|||++ .|+|||||||-+||+|++ .|.|||+|+|+|.....
T Consensus 124 L~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 124 LFTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999999987 4678889999999999999999998 789999999999999975 68999999999987643
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH---hhcccccc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR---QENRESEV 974 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 974 (1020)
......+|||.|||||... ..|...+||||||++|.||+|+.+||..+... .+..+... .+.....+
T Consensus 199 ----s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-----AQIYKKV~SGiKP~sl~kV 268 (632)
T KOG0584|consen 199 ----SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-----AQIYKKVTSGIKPAALSKV 268 (632)
T ss_pred ----cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-----HHHHHHHHcCCCHHHhhcc
Confidence 2234479999999999887 78999999999999999999999999866532 22222221 12222222
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
-|| ++.++|.+|+.. ..+|||+.|++.
T Consensus 269 ~dP------------evr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 269 KDP------------EVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred CCH------------HHHHHHHHHhcC-chhccCHHHHhh
Confidence 333 578999999999 999999999986
No 263
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.6e-33 Score=304.97 Aligned_cols=261 Identities=25% Similarity=0.352 Sum_probs=203.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEecc--CceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 817 (1020)
++|+..+.||.|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++.+. ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999874 578999999875432 3456789999999999999999999998654 3678999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++.........++...+..++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999998876544456688999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
.. .....++..|+|||...+..++.++||||+|+++|+|++|+.||...... .....+........ ......+.
T Consensus 158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~ 231 (287)
T cd06621 158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP-PLGPIELLSYIVNM-PNPELKDE 231 (287)
T ss_pred cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC-CCChHHHHHHHhcC-CchhhccC
Confidence 21 12345678999999999999999999999999999999999999754321 11111111111110 10111000
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. .........+.+++.+||+.+|.+|||+.|+++
T Consensus 232 -~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 -P--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred -C--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0 000112346889999999999999999999987
No 264
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.1e-33 Score=305.25 Aligned_cols=247 Identities=27% Similarity=0.448 Sum_probs=197.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
++|++.+.||+|+||.||+|.. +++.||+|.+..+. ....+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4588899999999999999975 57889999987543 235788999999999999999999998654 5789999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 82 ~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--- 153 (254)
T cd05083 82 KGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--- 153 (254)
T ss_pred CCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence 99999998764 234578999999999999999999998 9999999999999999999999999998764221
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
......+..|+|||...+..++.++|+||+|+++|||++ |+.||......+ .......... . ++
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~~~~~~~~~~-~---~~--- 218 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE------VKECVEKGYR-M---EP--- 218 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH------HHHHHhCCCC-C---CC---
Confidence 112234568999999988899999999999999999998 999986433211 1111111110 0 00
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
.......+.+++.+||+.+|++||+++++++.|++
T Consensus 219 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 ---PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11123467899999999999999999999998864
No 265
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-33 Score=304.48 Aligned_cols=251 Identities=29% Similarity=0.497 Sum_probs=200.6
Q ss_pred CCcCCeeeccCCeEEEEEEeCC-----CCEEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 744 FDQANIIGCGGFGLVYRATLPD-----GRNVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
|++.+.||+|+||.||+|...+ +..||+|++...... ..+.+.+|++.++.++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999998753 478999999766433 4568899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++....
T Consensus 81 e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhhh--ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 99999999999876421 1289999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
..... .....+++.|+|||...+..++.++||||+|+++|+|++ |..||..... ...... ...... .. .
T Consensus 156 ~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~~~---~~~~~~-~~--~ 225 (258)
T smart00219 156 DDYYK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVLEY---LKKGYR-LP--K 225 (258)
T ss_pred ccccc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH---HhcCCC-CC--C
Confidence 32111 112336789999999988899999999999999999999 7888864221 111111 111111 00 0
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWL 1016 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1016 (1020)
......++.+++.+|++.||++|||+.|+++.|
T Consensus 226 -------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 -------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111234688999999999999999999998864
No 266
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.3e-33 Score=308.60 Aligned_cols=264 Identities=24% Similarity=0.318 Sum_probs=199.6
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
++|+..+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|++++++++|||++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46889999999999999999876 58899999886442 2234567899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|++++++..+.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKNP----RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 99999888776532 3589999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHH-H-------HHhh-
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVI-R-------MRQE- 968 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~-~-------~~~~- 968 (1020)
.. ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+....+.... . ....
T Consensus 154 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 154 GD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred cc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 21 2223457789999998765 567899999999999999999999997543321111110000 0 0000
Q ss_pred cccccccCccccCcc-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 NRESEVLDPFIYDKQ-----HDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ~~~~~~~d~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........+...... .+.....+.+++.+||+.+|++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000000000 0112346889999999999999999999875
No 267
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.8e-33 Score=302.79 Aligned_cols=249 Identities=25% Similarity=0.380 Sum_probs=199.3
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC-ceEEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN-DRLLIYS 818 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 818 (1020)
+|++.+.||+|++|.||++..+ +++.||+|++.... ....+.+.+|++++++++|+|++++++.+...+ ..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4888999999999999999865 57889999986543 233456888999999999999999998876444 5789999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++......
T Consensus 81 ~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 999999999987642 34589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
. .......+++.|+|||+..+..++.++||||+|+++|+|++|+.||..... .......... ....
T Consensus 156 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~------~~~~~~~~~~-~~~~----- 221 (257)
T cd08223 156 C--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM------NSLVYRIIEG-KLPP----- 221 (257)
T ss_pred C--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHhc-CCCC-----
Confidence 2 223345678899999999999999999999999999999999999864221 1111111111 1101
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........+.+++.+|++.+|++||++.++++
T Consensus 222 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 222 ----MPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ----CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11122346889999999999999999999986
No 268
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=342.65 Aligned_cols=463 Identities=28% Similarity=0.316 Sum_probs=334.8
Q ss_pred eEEEecCCCcccccccccccCCCCCcEEecCCCCCCCCCCccccCCCCCCeeeccCCCCCCCCCCccCCCCcceeeeccC
Q 035998 87 VTGLFLYKRRLKGKLSESLGNLVQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSN 166 (1020)
Q Consensus 87 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N 166 (1020)
+.+|++++|.+. ..|..+..+.+|+.|+++.|.+. ..|.+..++.+|++|+|.+|.+...+.....+.+|++|++|.|
T Consensus 47 L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~~lP~~~~~lknl~~LdlS~N 124 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQSLPASISELKNLQYLDLSFN 124 (1081)
T ss_pred eEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhhcCchhHHhhhcccccccchh
Confidence 456666666554 45666667777777777777766 5666667777777777777666633322236677777777777
Q ss_pred ccCCCCCccccccCCcccEEEccCCCCCCCCCCccccccccccccccccccccccchhhhhhcccccccccccccCCCCC
Q 035998 167 SLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLS 246 (1020)
Q Consensus 167 ~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 246 (1020)
++. .+|..+. .++.+..++.++|..... ++... .+.++|..|.+.+.++.++..++. .|+|.+|.+. .
T Consensus 125 ~f~-~~Pl~i~-~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~-- 192 (1081)
T KOG0618|consen 125 HFG-PIPLVIE-VLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V-- 192 (1081)
T ss_pred ccC-CCchhHH-hhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-h--
Confidence 765 6665553 455666666666622211 22222 677777777777777777777766 7888888776 2
Q ss_pred cccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCC
Q 035998 247 PSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTN 326 (1020)
Q Consensus 247 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 326 (1020)
..+.++.+|+.|....|+++... -..++|+.|+.++|.++...+. ..-.+|+++++++|++++.+ .++..+.+
T Consensus 193 ~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~lp-~wi~~~~n 265 (1081)
T KOG0618|consen 193 LDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSNLP-EWIGACAN 265 (1081)
T ss_pred hhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeeccc--cccccceeeecchhhhhcch-HHHHhccc
Confidence 34566777888888888776321 2346788899999988843332 23458999999999999655 88999999
Q ss_pred cCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCcchhhHHHHHhhhcc-cchhh
Q 035998 327 LTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIYNLSSALQVLQQCRN-LTTLV 405 (1020)
Q Consensus 327 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~-L~~L~ 405 (1020)
|+.|+..+|+|+ .+|..+....+|+.|.+.+|.++ -+|....++++|++|+|..|.|..+|.. .+.-+.. |..|.
T Consensus 266 le~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~--~l~v~~~~l~~ln 341 (1081)
T KOG0618|consen 266 LEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDN--FLAVLNASLNTLN 341 (1081)
T ss_pred ceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchH--HHhhhhHHHHHHh
Confidence 999999999997 88989999999999999999998 5777888899999999999999999983 3333333 66666
Q ss_pred hhccccCCCCCCCccccccCceEEEecccccccccchhhhcCCCCcEEecccccccccccccccCcCcCcEEeCCCCccc
Q 035998 406 LTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGSIPQWLRGCSKLQLVDLSWNQLSGTIPVWFGGFQDLFYLDLSNNTFT 485 (1020)
Q Consensus 406 l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 485 (1020)
.+.|+.. ..+......++.|+.|++++|.++...-+.+.+..+|+.|+|++|+|.......+.++..|+.|+||+|+++
T Consensus 342 ~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~ 420 (1081)
T KOG0618|consen 342 VSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT 420 (1081)
T ss_pred hhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh
Confidence 6666543 334444556778999999999999988888999999999999999998444456789999999999999999
Q ss_pred ccCCCCCCCCcccccccCcCCCCCCCcccceeecccccccccccccCCCCeeecccCccccCCCccccCCCcceEEEecC
Q 035998 486 GEIPKNLTGLPSLITRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKH 565 (1020)
Q Consensus 486 ~~~p~~~~~l~~L~~l~~s~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~ 565 (1020)
.+|.++.++..|.++ ...+|++. +.| ++..+++|+.+|+|.
T Consensus 421 -~Lp~tva~~~~L~tL------------------------------------~ahsN~l~-~fP-e~~~l~qL~~lDlS~ 461 (1081)
T KOG0618|consen 421 -TLPDTVANLGRLHTL------------------------------------RAHSNQLL-SFP-ELAQLPQLKVLDLSC 461 (1081)
T ss_pred -hhhHHHHhhhhhHHH------------------------------------hhcCCcee-ech-hhhhcCcceEEeccc
Confidence 888988888887543 33444443 233 788899999999999
Q ss_pred CcceeccCccccCCCcccEEEccCCcccccCCccccccccccccccccc
Q 035998 566 NNLSGPIPSELTGMTSLETLDLSYNNLSGAIPISLEKLSFLSKFSVANN 614 (1020)
Q Consensus 566 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~l~ls~N 614 (1020)
|+|+...-+.-..-++|++|||++|.=.-..-..|..+.++...+++-|
T Consensus 462 N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 462 NNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred chhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 9997533222222388999999999833244455666666666666655
No 269
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=9.3e-34 Score=320.11 Aligned_cols=258 Identities=23% Similarity=0.287 Sum_probs=193.9
Q ss_pred HhccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEecc-----
Q 035998 739 ESTNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHK----- 810 (1020)
Q Consensus 739 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 810 (1020)
+..++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 4457899999999999999999985 4688999999875432 2234577899999999999999999987543
Q ss_pred -CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 811 -NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 811 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
...++++|++ +++|..++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC-----QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3468999988 7788877653 3589999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE 968 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 968 (1020)
|+++..... .....|++.|+|||++.+ ..++.++||||+||++|+|++|+.||...... +...........
T Consensus 163 g~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~ 234 (343)
T cd07878 163 GLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI---DQLKRIMEVVGT 234 (343)
T ss_pred ccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHHhCC
Confidence 999865321 233568999999998866 57899999999999999999999999643211 111111100000
Q ss_pred c------------------ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 N------------------RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ~------------------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. .......+... .........+.+++.+|++.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQSLPHMPQQDLK-KIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred CCHHHHHhcchhhHHHHhhccccccchhHH-HhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00000000000 000001124679999999999999999999986
No 270
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.9e-33 Score=303.71 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=202.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..|+..+.||.|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35778899999999999999865 58899999987543 33456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++.. ..+++..+..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 84 ~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 84 LGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 999999998864 2578889999999999999999998 99999999999999999999999999997654321
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......++..|+|||+..+..++.++|+||||+++|||++|+.||....+.... ..... ..
T Consensus 156 --~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------~~~~~-~~--------- 217 (277)
T cd06640 156 --IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL------FLIPK-NN--------- 217 (277)
T ss_pred --cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh------hhhhc-CC---------
Confidence 1223346788999999998889999999999999999999999999754322111 00100 00
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...........+.+++.+||+.+|++||++.++++
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 218 PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 01122334557889999999999999999999976
No 271
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.6e-33 Score=306.32 Aligned_cols=256 Identities=28% Similarity=0.422 Sum_probs=202.5
Q ss_pred HhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEeccC-----
Q 035998 739 ESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKN----- 811 (1020)
Q Consensus 739 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~----- 811 (1020)
.++++|++.+.||+|++|.||+|..+ +++.|++|++..... ..+.+.+|+++++++ +|+||+++++++.+..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35688999999999999999999875 578899999876543 346789999999999 7999999999997654
Q ss_pred -ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 812 -DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 812 -~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
..++||||+++++|.+++.........+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+|++|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 37899999999999999876544456789999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccCccCccccCC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYGQA-----SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
.+...... ........++..|+|||++.. ..++.++||||+|+++|+|++|+.||....... ....+
T Consensus 159 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~ 230 (275)
T cd06608 159 VSAQLDST--LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR------ALFKI 230 (275)
T ss_pred cceecccc--hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH------HHHHh
Confidence 98765322 122334568889999998653 346789999999999999999999996432211 11111
Q ss_pred HhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 966 RQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 966 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
... ...... ........+.+++.+||..||++|||+.++++
T Consensus 231 ~~~-~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 231 PRN-PPPTLK-------SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hcc-CCCCCC-------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 110 000111 11123346889999999999999999999986
No 272
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=5e-34 Score=317.34 Aligned_cols=269 Identities=27% Similarity=0.348 Sum_probs=207.3
Q ss_pred CCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEecc------CceEE
Q 035998 744 FDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK------NDRLL 815 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~l 815 (1020)
+...+.||+|+||.||+|+. .+|+.||||.+.... ....+...+|++++++++|+|||+++++-.+. +...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 44567899999999999995 479999999998654 23345678999999999999999999875543 35689
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc--CCCC--eEEeeccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD--GNFG--AHLADFGL 891 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~--~kl~Dfg~ 891 (1020)
|||||.||||...+.+. .+...+++.+.+.++.+++.||.|||++ +||||||||.||++- .+|+ .||+|||.
T Consensus 95 vmEyC~gGsL~~~L~~P-EN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSP-ENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEeecCCCcHHHHhcCc-ccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 99999999999999875 3445789999999999999999999999 999999999999983 3344 69999999
Q ss_pred cccccCCCCcccccccccccCccCccccC-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcc
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQ-ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENR 970 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 970 (1020)
|+...+ .....+.+||..|.+||... .+.|+..+|.|||||++|+++||..||..........-+.|....+.+..
T Consensus 171 Arel~d---~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 171 ARELDD---NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred cccCCC---CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 998743 34667889999999999988 48999999999999999999999999975543332222444444443332
Q ss_pred cccccCccccC------------ccCHHHHHHHHHHHhhccCCCCCCCC--CHHHHHHHHHhc
Q 035998 971 ESEVLDPFIYD------------KQHDKEMLRVLDIACLCLSESPKVRP--TTQQLVSWLDSI 1019 (1020)
Q Consensus 971 ~~~~~d~~~~~------------~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~i 1019 (1020)
.....++...+ ...+.....+...+..++..+|++|- .+.+....+..|
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 22222222111 11234445677788888999999998 666666555544
No 273
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.2e-33 Score=317.32 Aligned_cols=254 Identities=24% Similarity=0.265 Sum_probs=195.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+++.+ +++.||+|++.+.. ......+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46889999999999999999875 57789999986432 122345788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 999999999999753 23578999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCcccccccccccCccCccccC-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQ-----ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
.. ........||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+.......
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~------~~~~~~i~~~~~~~ 227 (332)
T cd05623 155 DG-TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKERF 227 (332)
T ss_pred CC-cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH------HHHHHHHhCCCccc
Confidence 21 12223357899999999875 34688999999999999999999999964321 11222221111000
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKV--RPTTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1014 (1020)
. -|. ........+.+++.+|+..++.+ |++++|+++
T Consensus 228 ~--~p~----~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 228 Q--FPA----QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred c--CCC----ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 0 010 01112245778888988655444 789999876
No 274
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=309.56 Aligned_cols=243 Identities=31% Similarity=0.425 Sum_probs=197.5
Q ss_pred CCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchh---hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 744 FDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQ---MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
|..++.||.|+||.||.|+. .+.+.||||++.....+ .-.++..|+..+++++|||++.+.|+|..+...|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 55567899999999999985 46788999998755432 235788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
|-| +-.+.+.-. +.++-+.++..|..+.+.||+|||++ +.||||||+.|||+++.|.||++|||.|.....
T Consensus 108 ClG-SAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-- 178 (948)
T KOG0577|consen 108 CLG-SASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-- 178 (948)
T ss_pred Hhc-cHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc--
Confidence 965 555555433 34688889999999999999999999 999999999999999999999999999976522
Q ss_pred CcccccccccccCccCcccc---CCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 900 DTHVTTDLVGTLGYIPPEYG---QASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
....+|||.|||||++ ..+.|+-|+||||+|+++.|+.-.++|+-.++ .+.....+.+.... .+
T Consensus 179 ----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN------AMSALYHIAQNesP--tL- 245 (948)
T KOG0577|consen 179 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESP--TL- 245 (948)
T ss_pred ----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch------HHHHHHHHHhcCCC--CC-
Confidence 3457899999999976 45789999999999999999999999975432 23333444333221 11
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+..+....+..++..|++.-|.+|||.+++++
T Consensus 246 ------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 246 ------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred ------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 12334456889999999999999999999876
No 275
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-33 Score=317.38 Aligned_cols=254 Identities=24% Similarity=0.249 Sum_probs=195.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+++.. +++.||+|.+.... ......+.+|+.++..++|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999865 67889999986532 122345788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++|+|.+++.+. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999763 24678899999999999999999999 999999999999999999999999999976643
Q ss_pred CCCcccccccccccCccCccccCC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQA-----SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
.. ........|++.|+|||++.+ +.++.++||||+||++|||++|+.||...... .....+.......
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~------~~~~~i~~~~~~~ 227 (331)
T cd05624 155 DG-TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHEERF 227 (331)
T ss_pred CC-ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH------HHHHHHHcCCCcc
Confidence 22 112233568999999998765 56788999999999999999999999643221 1111111111000
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKV--RPTTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1014 (1020)
. . |.. .......+.+++.+|++.++.+ |++++++++
T Consensus 228 ~-~-p~~----~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 228 Q-F-PSH----ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred c-C-CCc----cccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 0 0 000 0112245788999999866544 567888765
No 276
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.2e-33 Score=311.49 Aligned_cols=198 Identities=27% Similarity=0.406 Sum_probs=160.4
Q ss_pred CCeeeccCCeEEEEEEeC---CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEec--cCceEEEEEecc
Q 035998 747 ANIIGCGGFGLVYRATLP---DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMH--KNDRLLIYSFME 821 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 821 (1020)
..+||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. ....++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999865 45789999987543 23457889999999999999999999854 456789999987
Q ss_pred CCChhhhhhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEE----cCCCCeEEeecccc
Q 035998 822 NGSLDYWLHEKL-----DGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILL----DGNFGAHLADFGLA 892 (1020)
Q Consensus 822 ~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~~ 892 (1020)
+ ++.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 6766664321 1233588999999999999999999999 99999999999999 46678999999999
Q ss_pred ccccCCCCc-ccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 035998 893 RLILSPYDT-HVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMC 950 (1020)
Q Consensus 893 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~ 950 (1020)
+........ .......+|+.|+|||++.+ ..++.++||||+||++|||+||+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 876443221 12234568899999998866 46899999999999999999999999643
No 277
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.8e-33 Score=309.50 Aligned_cols=261 Identities=28% Similarity=0.398 Sum_probs=198.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
++|++.+.||+|+||.||+|..+ +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999975 588999998865432 234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|++++++..+.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKYP----NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 99999988776542 3589999999999999999999999 9999999999999999999999999998865432
Q ss_pred CCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh---------
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE--------- 968 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--------- 968 (1020)
. .......++..|+|||+..+ ..++.++||||||+++|||++|+.||...... +...........
T Consensus 154 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 154 G--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI---DQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred c--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH---HHHHHHHHHhCCCchhhHHHh
Confidence 2 22233567889999998765 45788999999999999999999998643211 111110000000
Q ss_pred --cc-cccccCccccC-----ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 --NR-ESEVLDPFIYD-----KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 --~~-~~~~~d~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. ......+.... ...+.....+.+++.+||+.+|++||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00 00000000000 001122456889999999999999999999986
No 278
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.5e-33 Score=303.22 Aligned_cols=254 Identities=26% Similarity=0.451 Sum_probs=198.4
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch----------hhHHHHHHHHHHHHHcCCCccceEeeEEeccC
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG----------QMEREFRAEVEALSRAQHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 811 (1020)
+|...+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677899999999999999754 688999998853211 11245788999999999999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..++||||+++++|.+++++. ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 999999999999999998764 4688999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASV--ATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
++...............++..|+|||...... ++.++|+||+|+++||+++|..||..... ...........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~ 228 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA------IAAMFKLGNKR 228 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch------HHHHHHhhccc
Confidence 97654322222233456788999999877654 78999999999999999999999963221 11111111111
Q ss_pred ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. .....+ .........+.+++.+||+.+|.+||+++++++
T Consensus 229 ~-~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 229 S-APPIPP----DVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred c-CCcCCc----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 0 011111 111123356889999999999999999999986
No 279
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=9.6e-33 Score=299.91 Aligned_cols=251 Identities=23% Similarity=0.366 Sum_probs=202.0
Q ss_pred CCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEec--cCceEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMH--KNDRLLIY 817 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 817 (1020)
+|++.+.||.|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999999985 468899999986432 2334568889999999999999999998764 34578999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhH-----hcCCCCeEecCCCCCCEEEcCCCCeEEeecccc
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLH-----QSCEPHILHRDIKSSNILLDGNFGAHLADFGLA 892 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 892 (1020)
||+++++|.+++.........+++..++.++.|++.|++||| +. +++||||+|+||+++.++.+|++|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999876555567899999999999999999999 66 9999999999999999999999999999
Q ss_pred ccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 893 RLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 893 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
....... .......+++.|+|||.+.+..++.++|+||||+++|+|++|+.||..... .. ....... ....
T Consensus 158 ~~~~~~~--~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~---~~~~~~~-~~~~ 228 (265)
T cd08217 158 KILGHDS--SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ---LQ---LASKIKE-GKFR 228 (265)
T ss_pred ccccCCc--ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH---HH---HHHHHhc-CCCC
Confidence 8764322 112335688999999999888899999999999999999999999975331 11 1111111 1110
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..+......+.+++.+|++.+|++||++.+|++
T Consensus 229 ---------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 229 ---------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ---------CCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 111223346889999999999999999999986
No 280
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.6e-33 Score=308.30 Aligned_cols=246 Identities=27% Similarity=0.432 Sum_probs=198.9
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3566788999999999999864 57889999987543 333457889999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++.. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 85 ~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06642 85 GGGSALDLLKP-----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc-
Confidence 99999988753 3578999999999999999999998 99999999999999999999999999987653321
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......++..|+|||+..+..++.++||||||+++|||++|+.||....+... ...... .. .+..
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~~~~~-~~-----~~~~- 221 (277)
T cd06642 156 -IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV------LFLIPK-NS-----PPTL- 221 (277)
T ss_pred -hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH------Hhhhhc-CC-----CCCC-
Confidence 122234678899999999998999999999999999999999999864332211 001100 00 1111
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+.+++.+||+.+|.+||++.++++
T Consensus 222 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 222 ---EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ---CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1122346889999999999999999999997
No 281
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.4e-33 Score=307.27 Aligned_cols=261 Identities=24% Similarity=0.331 Sum_probs=200.9
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++|||++++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 5788999999999999999864 68999999987653 33356788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+ +++|.+++.... ..+++.+++.++.||++||+|||+. +++|+||||+||+++.++.++++|||.+.......
T Consensus 81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 999999887542 4689999999999999999999999 99999999999999999999999999998764432
Q ss_pred CcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc---ccc---
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN---RES--- 972 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~--- 972 (1020)
. .......++..|+|||.+.+. .++.++||||+|+++|||++|.+||....+. ....+........ ...
T Consensus 154 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 154 P-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred C-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHHHHHHHHcCCCChHHHhhcc
Confidence 1 122345688899999987654 5689999999999999999998888643221 1111111110000 000
Q ss_pred ------cccCc----cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 ------EVLDP----FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 ------~~~d~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....+ .......+.....+.+++.+|++.+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000 0000001122357889999999999999999999986
No 282
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1e-32 Score=299.67 Aligned_cols=251 Identities=27% Similarity=0.484 Sum_probs=206.3
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.+.||+|++|.||+|+.. +++.||||++..... ...+.+.+|++.+++++|+|++++++++......++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999876 589999999876643 3456799999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-cCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-SCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+......
T Consensus 81 ~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999998764 468999999999999999999999 8 9999999999999999999999999999876432
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
.. ......++..|+|||...+..++.++|+||||+++|+|++|+.||.........+... ....... ..
T Consensus 154 ~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~---~~~~~~~-~~----- 222 (264)
T cd06623 154 LD--QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQ---AICDGPP-PS----- 222 (264)
T ss_pred CC--cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHH---HHhcCCC-CC-----
Confidence 21 1223467889999999999899999999999999999999999997654322222221 1111110 00
Q ss_pred ccCccCHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDK-EMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. +.. ....+.+++.+|++.+|++||++.++++
T Consensus 223 ~----~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 223 L----PAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred C----CcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0 111 2346889999999999999999999987
No 283
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=9.9e-33 Score=300.07 Aligned_cols=250 Identities=24% Similarity=0.390 Sum_probs=194.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-----hhhHHHHHHHHHHHHHcCCCccceEeeEEecc--Cce
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-----GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDR 813 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 813 (1020)
.+|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46889999999999999999864 68899999886432 12234688899999999999999999988753 567
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++++||+++++|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY----GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 8999999999999998753 3578899999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCC-cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 894 LILSPYD-THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 894 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
....... ........++..|+|||.+.+..++.++||||+||++|||++|+.||..... ............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~------~~~~~~~~~~~~-- 226 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA------MAAIFKIATQPT-- 226 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch------HHHHHHHhcCCC--
Confidence 6532111 1111234578899999999988899999999999999999999999974321 111111111110
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+.. +......+.+++ +||..+|++||+++|+++
T Consensus 227 ---~~~~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 ---NPQL----PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---CCCC----chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 1111 111223456666 688899999999999986
No 284
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.9e-33 Score=303.16 Aligned_cols=253 Identities=27% Similarity=0.455 Sum_probs=203.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|+..+.||+|++|.||+|..+ +++.||+|.+.... ....+++.+|++++++++||||+++++++......++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35788899999999999999875 68899999987653 34456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-cCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-SCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
+++++|.+++.... ..++...+..++.|++.|++|+|+ . +++||||||+||++++++.++++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 81 MDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred cCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 99999999987642 568889999999999999999999 7 9999999999999999999999999998765322
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
. .....++..|+|||...+..++.++||||+|+++|+|++|+.||...... ................ +.
T Consensus 155 ~----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~------~~ 223 (265)
T cd06605 155 L----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP-PDGIFELLQYIVNEPP------PR 223 (265)
T ss_pred H----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc-cccHHHHHHHHhcCCC------CC
Confidence 1 11256788999999999899999999999999999999999999754321 1122222222211111 00
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.... .....+.+++.+||..+|++||++.++++
T Consensus 224 ~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 224 LPSG---KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CChh---hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 0000 02345889999999999999999999986
No 285
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.2e-33 Score=307.17 Aligned_cols=261 Identities=25% Similarity=0.315 Sum_probs=195.3
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999875 68899999986542 12234677899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++ +|.+++... ...+++..++.++.||++||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CDQ-DLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 974 777776543 24589999999999999999999999 99999999999999999999999999998653322
Q ss_pred CcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcc------cc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENR------ES 972 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~------~~ 972 (1020)
.......++..|+|||.+.+. .++.++||||+||++|||+||..||...... ............... ..
T Consensus 154 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 154 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--DDQLKRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred --CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH--HHHHHHHHHHhCCCChHHhHHhh
Confidence 112334678899999987664 5789999999999999999999986432221 111111111000000 00
Q ss_pred cccCcccc---------CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 EVLDPFIY---------DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...+.... ....+.....+.+++.+||+.||.+|||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000 0011122346789999999999999999999975
No 286
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=7.7e-33 Score=303.96 Aligned_cols=253 Identities=25% Similarity=0.408 Sum_probs=195.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHH-HHHcCCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEA-LSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+..|+.. ++..+||||+++++++......++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46889999999999999999865 68999999987653 2233455556665 566689999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|++ |+|.+++.........+++..++.++.|++.|++|||+++ +++||||||+||+++.++.+||+|||.++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 997 6888888765444567899999999999999999999753 8999999999999999999999999999865322
Q ss_pred CCcccccccccccCccCccccCC----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQA----SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.......++..|+|||.+.+ ..++.++|+||+|+++|||++|+.||..... ..... ....... ....
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~---~~~~~~~-~~~~ 228 (283)
T cd06617 158 ---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PFQQL---KQVVEEP-SPQL 228 (283)
T ss_pred ---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CHHHH---HHHHhcC-CCCC
Confidence 11223467889999998765 4568899999999999999999999964221 11111 1111110 0110
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. ......+.+++.+||+.+|++||++.++++
T Consensus 229 ~~--------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 229 PA--------EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred Cc--------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 012245889999999999999999999986
No 287
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.5e-33 Score=306.48 Aligned_cols=260 Identities=25% Similarity=0.423 Sum_probs=202.3
Q ss_pred ccHHHHHHhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEec
Q 035998 732 ISIDDILESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMH 809 (1020)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 809 (1020)
.+..++..+.+.|++.+.||+|+||.||+|+.. +++.||+|.+..... ...++..|+.+++++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 355566667788999999999999999999864 688999999865532 235678899999998 79999999999863
Q ss_pred ------cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC
Q 035998 810 ------KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG 883 (1020)
Q Consensus 810 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 883 (1020)
....+++|||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 356789999999999999887643 23578888999999999999999999 9999999999999999999
Q ss_pred eEEeeccccccccCCCCcccccccccccCccCccccC-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccH
Q 035998 884 AHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQ-----ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDL 958 (1020)
Q Consensus 884 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~ 958 (1020)
++|+|||+++...... .......|+..|+|||.+. ...++.++||||+||++|||++|+.||....+....
T Consensus 160 ~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~-- 235 (282)
T cd06636 160 VKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL-- 235 (282)
T ss_pred EEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh--
Confidence 9999999987653221 1223356888999999875 356788999999999999999999999643321110
Q ss_pred HHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 959 ISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 959 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....... .+... .......+.+++.+||+.||.+||++.|+++
T Consensus 236 ----~~~~~~~------~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 ----FLIPRNP------PPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ----hhHhhCC------CCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0010000 00000 0112246889999999999999999999975
No 288
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=8.7e-33 Score=300.73 Aligned_cols=258 Identities=29% Similarity=0.463 Sum_probs=205.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.+.||.|+||.||+|... ++..+|+|++.... ....+.+.+|++.++.++|+|++++++.+...+..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47899999999999999999864 67899999987543 23456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999876422 24688999999999999999999999 99999999999999999999999999998775543
Q ss_pred Ccc--cccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 900 DTH--VTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 900 ~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
... ......++..|+|||++... .++.++|+||+|+++|||++|+.||....... ..... ..... .. ..
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~----~~~~~-~~-~~ 228 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLMLT----LQNDP-PS-LE 228 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHHHH----hcCCC-CC-cC
Confidence 321 22345688899999988766 78999999999999999999999997543321 11111 11100 00 00
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. .........+.+++.+||+.||++||+++++++
T Consensus 229 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 229 TG---ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred Cc---cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00 001122346789999999999999999999986
No 289
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.3e-33 Score=300.38 Aligned_cols=248 Identities=25% Similarity=0.429 Sum_probs=199.6
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|++++++++|||++++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5788999999999999999864 68899999986542 23346788999999999999999999999989999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC-CCeEEeeccccccccCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN-FGAHLADFGLARLILSP 898 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~ 898 (1020)
+++++|.+++.... ...+++..+..++.|++.|++|||++ +++||||+|+||+++++ +.+|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999999997642 34578999999999999999999999 99999999999999865 45899999999876432
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
. ......++..|+|||...+..++.++||||+|+++|+|++|+.||...... ... ....... .....+
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~~---~~~~~~~-~~~~~~-- 223 (256)
T cd08220 156 S---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP---ALV---LKIMSGT-FAPISD-- 223 (256)
T ss_pred c---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH---HHH---HHHHhcC-CCCCCC--
Confidence 1 222356788999999998888999999999999999999999999643321 111 1111111 111111
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.....+.+++.+||+.+|.+|||+.|+++
T Consensus 224 -------~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 -------RYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -------CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 12235889999999999999999999986
No 290
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.5e-33 Score=307.54 Aligned_cols=247 Identities=26% Similarity=0.383 Sum_probs=198.1
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
|.....||+|+||.||++... ++..||||.+........+.+.+|+..+++++|||++++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 444567999999999999864 6889999998765555556788999999999999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
++|.+++.. ..++++++..++.||+.|++|||+. +|+||||||+||+++.++.++|+|||++....... .
T Consensus 104 ~~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~ 173 (292)
T cd06658 104 GALTDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--P 173 (292)
T ss_pred CcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--c
Confidence 999998754 2478999999999999999999999 99999999999999999999999999987653221 1
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......++..|+|||...+..++.++||||+|+++|||++|+.||...... ... ....... .....+
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~---~~~~~~~-~~~~~~------ 240 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL---QAM---RRIRDNL-PPRVKD------ 240 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH---HHHHhcC-CCcccc------
Confidence 223356888999999998888999999999999999999999999643211 111 1111110 000001
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+.+++.+||+.||.+|||++|+++
T Consensus 241 -~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 241 -SHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred -ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0012235788999999999999999999987
No 291
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.9e-33 Score=301.50 Aligned_cols=249 Identities=25% Similarity=0.373 Sum_probs=200.7
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|+||.||+++.. +++.||+|.+.... ....+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5888999999999999999854 68899999986432 23345788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++.... ...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQR--GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 99999999887532 23578899999999999999999998 99999999999999999999999999997654321
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......|++.|+|||+..++.++.++|+||||+++|+|++|+.||..... ........... ...
T Consensus 156 --~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~------~~~~~~~~~~~-~~~------ 220 (256)
T cd08218 156 --ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM------KNLVLKIIRGS-YPP------ 220 (256)
T ss_pred --hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH------HHHHHHHhcCC-CCC------
Confidence 112234678899999999888999999999999999999999999864221 11111111111 000
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+......+.+++.+||+.+|.+||++.++++
T Consensus 221 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 221 ---VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ---CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 01112346889999999999999999999986
No 292
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.7e-34 Score=319.84 Aligned_cols=240 Identities=25% Similarity=0.284 Sum_probs=184.4
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEecCCchh---hHHHHHHHHHHHHHc---CCCccceEeeEEeccCceEEEEEeccC
Q 035998 750 IGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQ---MEREFRAEVEALSRA---QHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
||+|+||.||+|+.. +++.||||++...... ....+..|..++... +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 6899999998643211 122344566666655 699999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|..++... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~~----~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~ 151 (330)
T cd05586 81 GELFWHLQKE----GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--K 151 (330)
T ss_pred ChHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--C
Confidence 9999888653 4688999999999999999999999 99999999999999999999999999987543221 2
Q ss_pred cccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccC
Q 035998 903 VTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYD 981 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 981 (1020)
......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+..... ....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~------~~~~~i~~~~~--~~~~----- 218 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ------QMYRNIAFGKV--RFPK----- 218 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH------HHHHHHHcCCC--CCCC-----
Confidence 23345789999999988654 5889999999999999999999999643211 11111111100 0000
Q ss_pred ccCHHHHHHHHHHHhhccCCCCCCCC----CHHHHHH
Q 035998 982 KQHDKEMLRVLDIACLCLSESPKVRP----TTQQLVS 1014 (1020)
Q Consensus 982 ~~~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~ 1014 (1020)
. .....+.+++.+||+.||.+|| ++.++++
T Consensus 219 ~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 N---VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred c---cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0 0123567899999999999998 5666654
No 293
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.5e-33 Score=305.72 Aligned_cols=247 Identities=26% Similarity=0.372 Sum_probs=197.7
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
|+....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++...+..++||||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 334557999999999999864 6899999998654444456788999999999999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
++|..++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++....... .
T Consensus 103 ~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~ 172 (297)
T cd06659 103 GALTDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--P 172 (297)
T ss_pred CCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc--c
Confidence 999887754 3578999999999999999999999 99999999999999999999999999987653221 1
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......++..|+|||++.+..++.++||||+|+++|||++|+.||..... ............ ....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~-~~~~------- 238 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKRLRDSPP-PKLK------- 238 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhccCC-CCcc-------
Confidence 22345688999999999888999999999999999999999999964321 111111111110 0000
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........+.+++.+||+.+|.+||+++++++
T Consensus 239 ~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 239 NAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00111235789999999999999999999987
No 294
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.8e-33 Score=305.69 Aligned_cols=262 Identities=23% Similarity=0.334 Sum_probs=196.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++|++.+.||+|++|.||+|..+ +++.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57899999999999999999865 688999999865432 2234567899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++ +|.+++.+. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+++....+.
T Consensus 85 ~~~-~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LDT-DLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 985 898888754 23678999999999999999999999 99999999999999999999999999987543221
Q ss_pred CcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh---cccccc-
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE---NRESEV- 974 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 974 (1020)
. ......++..|+|||+..+ ..++.++||||+|+++|||++|+.||...... .+........... ......
T Consensus 158 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 158 K--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV--EDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred c--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHhcCCCChhhhhhhh
Confidence 1 1122346788999998765 56889999999999999999999999644311 1111111110000 000000
Q ss_pred ------------cCccccCcc--CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 ------------LDPFIYDKQ--HDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ------------~d~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..+...... .......+.+++.+|++.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000000 0001146789999999999999999999875
No 295
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.5e-32 Score=302.52 Aligned_cols=244 Identities=24% Similarity=0.311 Sum_probs=199.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46889999999999999999865 68999999986542 123456888999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRKS----GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 999999999998764 4688999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
. .....+++.|+|||...+...+.++||||+|+++|+|++|+.||..... ......... ... .
T Consensus 154 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~-~~~-~---- 216 (290)
T cd05580 154 R-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP------IQIYEKILE-GKV-R---- 216 (290)
T ss_pred C-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhc-CCc-c----
Confidence 2 2334688999999998888899999999999999999999999964331 111111111 100 0
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
+ +......+.+++.+||+.||.+|| +++|+++
T Consensus 217 -~----~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 217 -F----PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred -C----CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 0 001123678999999999999999 7777764
No 296
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.2e-33 Score=306.95 Aligned_cols=262 Identities=26% Similarity=0.350 Sum_probs=200.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
++|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36889999999999999999875 57899999886542 2234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|++++.+..+... ...+++..+..++.||+.|++|||+. +++||||+|+||++++++.+|++|||.+......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 9998777665543 24578999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh---------
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE--------- 968 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--------- 968 (1020)
.. .......++..|+|||+..+. .++.++||||+|+++|+|++|+.||...... +...........
T Consensus 154 ~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 154 PA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI---DQLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred cc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHhhhc
Confidence 22 122345678899999998887 8899999999999999999999999743221 111111110000
Q ss_pred ---c-----ccccccCccc-cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 ---N-----RESEVLDPFI-YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ---~-----~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ......++.. ...++......+.+++.+||+.+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 0000000000 00111122457899999999999999999999975
No 297
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.8e-33 Score=307.19 Aligned_cols=255 Identities=22% Similarity=0.292 Sum_probs=198.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.+.||+|+||.||++... +++.||+|.+..... .....+.+|+++++.++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999865 578999999875532 22346788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++....
T Consensus 81 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKNI----GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 999999999998754 4588999999999999999999999 999999999999999999999999999874211
Q ss_pred CCCc-------------ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHH
Q 035998 898 PYDT-------------HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIR 964 (1020)
Q Consensus 898 ~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 964 (1020)
.... .......++..|+|||.+....++.++|+||||+++|||++|+.||...... +....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~------~~~~~ 227 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE------ELFGQ 227 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHH
Confidence 1000 0111235678899999998889999999999999999999999999643211 11111
Q ss_pred HHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 965 MRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 965 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
..... ...+.... .....+.+++.+||+.||++||++.++.+.++
T Consensus 228 ~~~~~----~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 228 VISDD----IEWPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHhcc----cCCCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 11111 00111000 12235789999999999999999665555544
No 298
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.1e-32 Score=303.77 Aligned_cols=249 Identities=24% Similarity=0.384 Sum_probs=202.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 742 NNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
++|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.++++++|||++++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5789999999999999999975 468899999987554444567889999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++++|.+++.+. .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~- 169 (293)
T cd06647 99 AGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 169 (293)
T ss_pred CCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccc-
Confidence 999999998753 478899999999999999999999 99999999999999999999999999987654322
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......+++.|+|||......++.++||||||+++|++++|+.||........... ..... ...
T Consensus 170 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~~~~-~~~------- 234 (293)
T cd06647 170 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNG-TPE------- 234 (293)
T ss_pred -cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hhcCC-CCC-------
Confidence 122334688899999998888899999999999999999999999975432211110 00000 000
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..........+.+++.+||+.+|++||++.+++.
T Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 235 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011122345889999999999999999999987
No 299
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-34 Score=298.11 Aligned_cols=247 Identities=29% Similarity=0.399 Sum_probs=198.9
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
.+.|+.-++||+|+||+||-++.+ +|+-+|.|.+.+.. ...+.....|-+++++++.+.||.+--.|...+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 456888899999999999999865 68889998875443 23345678899999999999999998889999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
+..|.||||..++... +.+.++++.++.++.+|+.||++||+. +||+||+||+|||+|+.|+++|+|.|+|..+.
T Consensus 264 LtlMNGGDLkfHiyn~--g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNH--GNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEeecCCceeEEeecc--CCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999988876 346799999999999999999999999 99999999999999999999999999999874
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
. .......+||.+|||||++.++.|+...|+||+||++|||+.|+.||.......-..-+ ..+... |
T Consensus 339 ~---g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEv--drr~~~--------~ 405 (591)
T KOG0986|consen 339 E---GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEV--DRRTLE--------D 405 (591)
T ss_pred C---CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHH--HHHHhc--------c
Confidence 3 23334458999999999999999999999999999999999999999754322111011 011110 1
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCC
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPT 1008 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1008 (1020)
+. .++..-.++..++.+..++.||++|..
T Consensus 406 ~~---ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 406 PE---EYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred hh---hcccccCHHHHHHHHHHHccCHHHhcc
Confidence 11 112222335677888889999999974
No 300
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.8e-33 Score=306.36 Aligned_cols=260 Identities=27% Similarity=0.321 Sum_probs=198.5
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchh-----hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQ-----MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
+|+..+.||+|+||.||+|... +++.||||++...... ....+.+|++++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4788899999999999999865 6899999999755322 345577899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+ +++|.+++.... ..+++..++.++.||++||+|||++ +++||||||+||+++.++.++|+|||+++...
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 889999987541 3689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc------
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN------ 969 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~------ 969 (1020)
.... ......++..|+|||.+.+ ..++.++||||+||++|||++|.+||....+. +............
T Consensus 154 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 154 SPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI---DQLGKIFEALGTPTEENWP 228 (298)
T ss_pred CCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH---HHHHHHHHHcCCCchhhhh
Confidence 4321 2223456778999998754 56789999999999999999998887643321 1111111100000
Q ss_pred ---ccccccCccccCc-----cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 ---RESEVLDPFIYDK-----QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 ---~~~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
............. ........+.+++.+||+.||++||+++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0000000000000 01122356889999999999999999999987
No 301
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.5e-32 Score=296.66 Aligned_cols=252 Identities=31% Similarity=0.439 Sum_probs=200.9
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5888999999999999999864 688999999876544 2557789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEHG----RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhhc----CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 9999999988753 3578899999999999999999999 99999999999999999999999999998764432
Q ss_pred Cccc--ccccccccCccCccccCCCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 900 DTHV--TTDLVGTLGYIPPEYGQASV---ATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 900 ~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.... .....++..|+|||++.+.. ++.++||||||+++|||++|+.||...... ......... ......
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-----~~~~~~~~~-~~~~~~ 227 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-----FQIMFHVGA-GHKPPI 227 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-----HHHHHHHhc-CCCCCC
Confidence 2111 12346788999999987766 889999999999999999999999643211 111111111 110110
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+ .......+.+++.+||+.+|.+||++.|++.
T Consensus 228 ~~-------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 PD-------SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred Cc-------ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00 0011235779999999999999999999875
No 302
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.3e-32 Score=298.94 Aligned_cols=250 Identities=24% Similarity=0.363 Sum_probs=195.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-----hhhHHHHHHHHHHHHHcCCCccceEeeEEecc--Cce
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-----GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDR 813 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 813 (1020)
++|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57889999999999999999864 58899999875322 12235688899999999999999999988764 457
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY----GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 7999999999999998754 3478888999999999999999999 99999999999999999999999999988
Q ss_pred cccCCCCc-ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 894 LILSPYDT-HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 894 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
........ .......++..|+|||...+..++.++||||||+++|||++|+.||..... ............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~-- 226 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA------MAAIFKIATQPT-- 226 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch------HHHHHHHhcCCC--
Confidence 65322111 112234678899999999888899999999999999999999999964311 111111111110
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+ ..+......+.+++.+|+. +|++||+++|+++
T Consensus 227 ---~~----~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 227 ---NP----VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ---CC----CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 11 1122333457789999995 9999999999986
No 303
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=285.98 Aligned_cols=247 Identities=23% Similarity=0.327 Sum_probs=199.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHH---HHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMER---EFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|+.++++|+|.||+|-+++-+ +++.+|+|+++++.-.... .-..|-++++..+||.+..+.-.|+..+..+.||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 56899999999999999999854 7899999999887532222 3356889999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||..||.|..++.+. ..++++..+.+-..|..||.|||++ +||+||+|.+|.++|.||++||+|||+++.-..
T Consensus 248 eyanGGeLf~HLsre----r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 248 EYANGGELFFHLSRE----RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEccCceEeeehhhh----hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccc
Confidence 999999998887764 5788889999999999999999999 999999999999999999999999999986432
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
....+...+|||.|.|||++....|+.++|+|.+||+||||++|+.||....-.....++. ...++. +.
T Consensus 321 --~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl-~ed~kF----Pr---- 389 (516)
T KOG0690|consen 321 --YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL-MEDLKF----PR---- 389 (516)
T ss_pred --ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH-hhhccC----Cc----
Confidence 2344567899999999999999999999999999999999999999997432211111111 011111 11
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
....+...++...+..||.+|. .++||.+
T Consensus 390 --------~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 390 --------TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred --------cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 1112467788899999999997 3555544
No 304
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=337.50 Aligned_cols=463 Identities=26% Similarity=0.297 Sum_probs=254.3
Q ss_pred ccccccCCCCCcEEecCCCCCCCCCCccccCCCCCCeeeccCCCCCCCCCCccCCCCcceeeeccCccCCCCCccccccC
Q 035998 101 LSESLGNLVQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSNSLNGSVPTSICKNS 180 (1020)
Q Consensus 101 ~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~ 180 (1020)
+|..+..-..++.|+++.|.+-...-+.+.+.-+|+.||+++|+++..+-..-.+.+|+.|.++.|.+. .+|.+. ..+
T Consensus 13 ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~-~vp~s~-~~~ 90 (1081)
T KOG0618|consen 13 IPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIR-SVPSSC-SNM 90 (1081)
T ss_pred cchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccccCCchhhhHHHHhhcccchhhHh-hCchhh-hhh
Confidence 444444444455555555554411112223333455555555555432222224555555555555555 455332 345
Q ss_pred CcccEEEccCCCCCCCCCCccccccccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEc
Q 035998 181 SRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDV 260 (1020)
Q Consensus 181 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 260 (1020)
.+|++++|.+|.+. ..|..+..+.+|+.|+++.|++. .+|..+..++.+..+..++|.....++. . .++.++|
T Consensus 91 ~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~----~-~ik~~~l 163 (1081)
T KOG0618|consen 91 RNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ----T-SIKKLDL 163 (1081)
T ss_pred hcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc----c-cchhhhh
Confidence 55566666655555 55666666666666666666665 5566666666666666666622211111 1 1555566
Q ss_pred cCCcCcccCcccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCC
Q 035998 261 SSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGP 340 (1020)
Q Consensus 261 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 340 (1020)
..|.+.+.++..+..++. .|+|.+|.+. -..+.++.+|+.|....|++....- ..++|+.|+.++|.++..
T Consensus 164 ~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~----~g~~l~~L~a~~n~l~~~ 234 (1081)
T KOG0618|consen 164 RLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEI----SGPSLTALYADHNPLTTL 234 (1081)
T ss_pred hhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEe----cCcchheeeeccCcceee
Confidence 666665555555554444 4666666655 1234455556666666665553221 235566666666666522
Q ss_pred CCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCcchhhHHHHHhhhcccchhhhhccccCCCCCCCcc
Q 035998 341 LPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIYNLSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPR 420 (1020)
Q Consensus 341 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~ 420 (1020)
.+... -.+|+++++++|++++ +|++++.+.+|+.++..+|+++.+|.. +...++|+.|.+..|......+. .
T Consensus 235 ~~~p~--p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~~lp~r---i~~~~~L~~l~~~~nel~yip~~--l 306 (1081)
T KOG0618|consen 235 DVHPV--PLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLVALPLR---ISRITSLVSLSAAYNELEYIPPF--L 306 (1081)
T ss_pred ccccc--cccceeeecchhhhhc-chHHHHhcccceEecccchhHHhhHHH---HhhhhhHHHHHhhhhhhhhCCCc--c
Confidence 22221 2456666666666653 446666666666666666666555443 33444455555554433222211 1
Q ss_pred ccccCceEEEecccccccccchhhhcCCC-CcEEecccccccccccc-cccCcCcCcEEeCCCCcccccCCCCCCCCccc
Q 035998 421 LHFANLKVLVIASCGLRGSIPQWLRGCSK-LQLVDLSWNQLSGTIPV-WFGGFQDLFYLDLSNNTFTGEIPKNLTGLPSL 498 (1020)
Q Consensus 421 ~~~~~L~~L~l~~n~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 498 (1020)
..++.|+.|+|..|++....+..+.-+.. |+.|+.+.|+++ ..|. .=..++.|+.|+|.+|.|+...-+.+.+.++|
T Consensus 307 e~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hL 385 (1081)
T KOG0618|consen 307 EGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHL 385 (1081)
T ss_pred cccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccce
Confidence 12455666666666665444433333333 555555555555 2331 11123445556666666655555555555554
Q ss_pred ccccCcCCCCCCCcccceeecccccccccccccCCC----------CeeecccCccccCCCccccCCCcceEEEecCCcc
Q 035998 499 ITRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFP----------PTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNL 568 (1020)
Q Consensus 499 ~~l~~s~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~----------~~l~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l 568 (1020)
+.++ |+||++.+|| ++|+||+|+++. +|+++..+..|++|...+|+|
T Consensus 386 KVLh----------------------LsyNrL~~fpas~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l 442 (1081)
T KOG0618|consen 386 KVLH----------------------LSYNRLNSFPASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQL 442 (1081)
T ss_pred eeee----------------------ecccccccCCHHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCce
Confidence 3332 3344444443 357788888874 668888999999999999999
Q ss_pred eeccCccccCCCcccEEEccCCccccc-CCccccccccccccccccccc
Q 035998 569 SGPIPSELTGMTSLETLDLSYNNLSGA-IPISLEKLSFLSKFSVANNHL 616 (1020)
Q Consensus 569 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~-ip~~l~~l~~L~~l~ls~N~l 616 (1020)
. ..| ++.++++|+.+|+|.|+|+.. +|..... ++|++||+++|.-
T Consensus 443 ~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 443 L-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTR 488 (1081)
T ss_pred e-ech-hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcc
Confidence 7 677 889999999999999998843 4443333 7899999999984
No 305
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.3e-33 Score=283.01 Aligned_cols=269 Identities=26% Similarity=0.359 Sum_probs=199.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC---C--CCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEec-cCce
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP---D--GRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMH-KNDR 813 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~---~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 813 (1020)
..|+..+.||+|.||.||+|..+ + ...+|+|+++.+. ........+|+..+++++|||++.+..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 45889999999999999999532 2 2379999998663 2334567899999999999999999999987 7788
Q ss_pred EEEEEeccCCChhhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC----CCeEEee
Q 035998 814 LLIYSFMENGSLDYWLHEKLD-GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN----FGAHLAD 888 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~D 888 (1020)
++++||.+. ||.+.++-... ....++...+..|+.||+.|+.|||++ -|+||||||.|||+..+ |.|||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeec
Confidence 999999987 67776654322 235788899999999999999999999 99999999999999888 9999999
Q ss_pred ccccccccCCCCcc-cccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCc------ccHHH
Q 035998 889 FGLARLILSPYDTH-VTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGS------RDLIS 960 (1020)
Q Consensus 889 fg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~------~~~~~ 960 (1020)
||+++.+.++-... .....+-|..|+|||.+.+ ..|+.+.|||+.|||+.||+|-++-|.+....-. .+++.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 99999987765433 2334677999999997765 5799999999999999999999888864322111 12222
Q ss_pred HHHHHHhhcccccccC----ccc-----------cCccC-HH-------HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 961 WVIRMRQENRESEVLD----PFI-----------YDKQH-DK-------EMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 961 ~~~~~~~~~~~~~~~d----~~~-----------~~~~~-~~-------~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..-..........+.+ |.. +.... .. .....++++.+++.+||.+|.|++++++
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 2211111111111111 100 00000 00 0012678999999999999999999986
No 306
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.1e-32 Score=307.91 Aligned_cols=268 Identities=24% Similarity=0.320 Sum_probs=197.3
Q ss_pred CCCcCCeeeccCCeEEEEEEeC---CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEecc--CceE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP---DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDRL 814 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 814 (1020)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999864 47899999998643 33345678899999999999999999999988 7889
Q ss_pred EEEEeccCCChhhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC----CCCeEEeec
Q 035998 815 LIYSFMENGSLDYWLHEKLDG-PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG----NFGAHLADF 889 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~Df 889 (1020)
+||||+++ ++.+++...... ...+++..++.++.|++.|++|||+. +|+||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 566666543332 23789999999999999999999999 9999999999999999 999999999
Q ss_pred cccccccCCCCc-ccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcc-------cHHH
Q 035998 890 GLARLILSPYDT-HVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSR-------DLIS 960 (1020)
Q Consensus 890 g~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~-------~~~~ 960 (1020)
|+++........ .......++..|+|||+..+ ..++.++||||+|+++|+|++|+.||......... ....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 999876433221 12233467889999998765 46789999999999999999999999754433200 0000
Q ss_pred HHHHHHhhc--------cccc-------ccCcccc-Cc----cCH--HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 961 WVIRMRQEN--------RESE-------VLDPFIY-DK----QHD--KEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 961 ~~~~~~~~~--------~~~~-------~~d~~~~-~~----~~~--~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....+.... ...+ ....... .. ... ....++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000000 0000 0000000 00 000 22246889999999999999999999975
No 307
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.4e-32 Score=303.18 Aligned_cols=264 Identities=25% Similarity=0.320 Sum_probs=196.3
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++++|.+.+.||+|+||.||+|... +++.||+|.+..... .....+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999864 688999999865432 22346778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||++ +++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 6776666543 23567888999999999999999999 999999999999999999999999999876533
Q ss_pred CCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHh---------
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQ--------- 967 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~--------- 967 (1020)
... ......+++.|+|||...+ ..++.++||||+|+++|||++|+.||....+. ............
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 156 PSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--FEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred CCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHHHHHHcCCCChhhhhh
Confidence 221 1233456889999998765 45788999999999999999999999754321 111111110000
Q ss_pred ----hcccccccCccccCc-----cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 968 ----ENRESEVLDPFIYDK-----QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 968 ----~~~~~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+.............. ........+.+++.+|++.||++|||++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000000 00011246789999999999999999999875
No 308
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-34 Score=306.56 Aligned_cols=249 Identities=25% Similarity=0.419 Sum_probs=203.8
Q ss_pred CCcCCeeeccCCeEEEEEEeCCCC-EEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 744 FDQANIIGCGGFGLVYRATLPDGR-NVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~~~~-~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
|+++..||.|+||.||+|..++.. ..|.|++........+++.-|++++....||+||++++.|..+...+|+.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 566778999999999999876533 4567888776666667889999999999999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|-.+..+-+. +..+++.++..++.|++.||.|||++ .|||||||+.|||++-+|.++++|||.+..... ...
T Consensus 114 GAVDaimlEL---~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~q 185 (1187)
T KOG0579|consen 114 GAVDAIMLEL---GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQ 185 (1187)
T ss_pred chHhHHHHHh---ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh--HHh
Confidence 9999888765 45789999999999999999999999 999999999999999999999999999865422 223
Q ss_pred cccccccccCccCcccc-----CCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 903 VTTDLVGTLGYIPPEYG-----QASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
.....+|||.|||||+. ...+|+.++||||||+++.||..+.+|-...++ +.....+.... .+..+.
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp------MRVllKiaKSe-PPTLlq- 257 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSE-PPTLLQ- 257 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch------HHHHHHHhhcC-CCcccC-
Confidence 44568999999999974 457899999999999999999999999764433 22222222111 112222
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+......+.+++.+|+..+|..||+++++++
T Consensus 258 ------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 258 ------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ------cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 2344457889999999999999999999986
No 309
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.9e-32 Score=299.73 Aligned_cols=245 Identities=27% Similarity=0.434 Sum_probs=198.6
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++.+++++||||+++++++.+.+..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 677889999999999999864 68899999886443 2334578899999999999999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++.. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 86 ~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 86 GGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 9999988864 3578999999999999999999998 99999999999999999999999999987653221
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccC
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYD 981 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 981 (1020)
.......++..|+|||...+..++.++|+||+||++|+|++|..||...... ........ ... +..
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~-~~~-----~~~-- 221 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM------KVLFLIPK-NNP-----PTL-- 221 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH------HHHHHHhc-CCC-----CCC--
Confidence 1223346788999999998888999999999999999999999999643221 11111111 100 001
Q ss_pred ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 982 KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 982 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+.+++.+||+.+|.+||++.++++
T Consensus 222 --~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 222 --EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred --CcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1122345789999999999999999999998
No 310
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.7e-32 Score=306.29 Aligned_cols=253 Identities=23% Similarity=0.281 Sum_probs=201.0
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchh---hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQ---MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|+..+.||+|++|.||+|... +++.||+|.+...... ..+.+.+|+++++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999865 5899999999765322 3456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+.+++|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 999999999988753 234689999999999999999999999 999999999999999999999999999876432
Q ss_pred CCCc---------------------------ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 035998 898 PYDT---------------------------HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMC 950 (1020)
Q Consensus 898 ~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~ 950 (1020)
.... .......|+..|+|||+..+..++.++||||+|+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 1110 0111246788999999998888999999999999999999999999744
Q ss_pred CCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 035998 951 KPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT----TQQLVS 1014 (1020)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 1014 (1020)
.... .......... .. + ........+.+++.+||+.||++||+ ++|+++
T Consensus 236 ~~~~------~~~~~~~~~~--~~--~-----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 236 NRDE------TFSNILKKEV--TF--P-----GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred chHH------HHHHHhcCCc--cC--C-----CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 3211 1111111000 00 0 00113346899999999999999999 777776
No 311
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.1e-32 Score=300.48 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=199.4
Q ss_pred CCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 744 FDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
|...+.||+|++|.||+|.. .+++.||+|++........+.+.+|+.+++.++|||++++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 45567999999999999985 46889999998755444456688999999999999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
++|.+++.. ..++++.+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+....... .
T Consensus 101 ~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--~ 170 (285)
T cd06648 101 GALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--P 170 (285)
T ss_pred CCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC--c
Confidence 999998875 2578899999999999999999999 99999999999999999999999999887653221 1
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
......|++.|+|||...+..++.++||||+|+++|||++|+.||..... .......... .......
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~------~~~~~~~~~~-~~~~~~~------ 237 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP------LQAMKRIRDN-LPPKLKN------ 237 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHhc-CCCCCcc------
Confidence 22335688999999999888899999999999999999999999864321 1111112111 1111100
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+.+++.+||+.+|++||++.++++
T Consensus 238 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 238 -LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0112246889999999999999999999986
No 312
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=8.4e-33 Score=299.21 Aligned_cols=247 Identities=27% Similarity=0.335 Sum_probs=200.9
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788999999999999999875 58999999987543 2335678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++++|||.+......
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999988754 4688999999999999999999999 9999999999999999999999999998865432
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
. ......|+..|+|||...+..++.++|+||+|+++|+|++|+.||............ ...... .. .
T Consensus 154 ~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~~---~~-~--- 220 (258)
T cd05578 154 T---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR---AKQETA---DV-L--- 220 (258)
T ss_pred c---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHH---HHhccc---cc-c---
Confidence 1 223456788999999998888999999999999999999999999754432111111 111100 00 0
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCH--HHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTT--QQLV 1013 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 1013 (1020)
.+......+.+++.+||+.||.+||++ +|++
T Consensus 221 ----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 221 ----YPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ----CcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 011122468899999999999999999 6665
No 313
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.2e-32 Score=299.29 Aligned_cols=247 Identities=26% Similarity=0.438 Sum_probs=198.0
Q ss_pred CCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcC---CCccceEeeEEeccCceEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQ---HPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 817 (1020)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... .....++.+|++++++++ |||++++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477889999999999999986 478999999987543 233456888999999996 999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 999999999987642 688999999999999999999999 999999999999999999999999999987644
Q ss_pred CCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
.. .......|+..|+|||...+ ..++.++|+||||+++|+|++|+.||........ ..... .. ..
T Consensus 154 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~------~~~~~-~~-----~~ 219 (277)
T cd06917 154 NS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA------MMLIP-KS-----KP 219 (277)
T ss_pred Cc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh------hhccc-cC-----CC
Confidence 32 22233568889999998765 4578999999999999999999999975322111 10000 00 00
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+..... .....+.+++.+||+.||++||++.|+++
T Consensus 220 ~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 220 PRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 111111 12346889999999999999999999976
No 314
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.2e-32 Score=300.57 Aligned_cols=261 Identities=25% Similarity=0.321 Sum_probs=196.2
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|+..+.||.|++|.||+|+.. +++.||||++..+.. .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788999999999999999865 688999998875432 2335688999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+. ++|..++... ....+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||+++......
T Consensus 81 ~~-~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 5888887653 234689999999999999999999999 99999999999999999999999999987653321
Q ss_pred CcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc---------
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN--------- 969 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--------- 969 (1020)
.......++..|+|||+..+. .++.++||||||+++|||+||+.||...... ..............
T Consensus 155 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 155 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVTS 230 (284)
T ss_pred --cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhhhhhhH
Confidence 112234567899999987654 4688999999999999999999999643211 11111111100000
Q ss_pred ------ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 ------RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 ------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......... ....+.....+.+++.+|++.||++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 231 LPDYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000000 0000111235778999999999999999999975
No 315
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.6e-32 Score=303.52 Aligned_cols=265 Identities=20% Similarity=0.256 Sum_probs=195.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcC-CCccceEeeEEeccCc-----
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQ-HPNLVHLQGYCMHKND----- 812 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 812 (1020)
++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46889999999999999999865 689999998765432 22356788999999995 6999999999887665
Q ss_pred eEEEEEeccCCChhhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC-CCCeEEeecc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDG-PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG-NFGAHLADFG 890 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg 890 (1020)
.++||||+++ ++.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+|++|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999986 788887654322 34689999999999999999999999 9999999999999998 8899999999
Q ss_pred ccccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
.++....+. .......+++.|+|||++.+ ..++.++||||+|+++|+|++|..||....... ...........+.
T Consensus 157 ~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~ 232 (295)
T cd07837 157 LGRAFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ--QLLHIFKLLGTPT 232 (295)
T ss_pred cceecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHhCCCC
Confidence 988653321 11223356788999998754 567899999999999999999999997532211 1111111000000
Q ss_pred --ccccc---cC--------ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 --RESEV---LD--------PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 --~~~~~---~d--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..... .+ +.......+.....+.+++.+||+.||.+||+++|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000 00 00000000122346889999999999999999999975
No 316
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.4e-32 Score=303.45 Aligned_cols=261 Identities=25% Similarity=0.304 Sum_probs=197.4
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEecc--CceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 816 (1020)
++|++.+.||+|+||.||+|..+ +++.||+|.++.... .....+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888999999999999999875 588999999875432 2234567899999999999999999998877 889999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++...
T Consensus 85 ~e~~~~-~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETMK---QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999975 8888876542 3689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHh--------
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQ-------- 967 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~-------- 967 (1020)
.+. .......+++.|+|||...+. .++.++|+||+|+++|||++|..||........ .........
T Consensus 158 ~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 158 SPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ---LNKIFKLLGTPTEKIWP 232 (293)
T ss_pred CCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCchHHHH
Confidence 432 122334578899999987654 468899999999999999999999975432111 111100000
Q ss_pred -----h----cccccccCccccCccCHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 968 -----E----NRESEVLDPFIYDKQHDK-EMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 968 -----~----~~~~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ..........+....... ....+.+++.+||+.+|++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 000000000001111111 2345789999999999999999999985
No 317
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=281.90 Aligned_cols=263 Identities=23% Similarity=0.341 Sum_probs=202.5
Q ss_pred HHHHHHhccCCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEeccC
Q 035998 734 IDDILESTNNFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 734 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 811 (1020)
++|+.+.+ .+.||+|+|+.|..+. ..+|..||||++.+........+.+|++++.+. .|+||++++++|.+++
T Consensus 75 F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 45555544 3679999999999886 678999999999988777778899999999988 5999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC---eEEee
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG---AHLAD 888 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~D 888 (1020)
..|+|||-|.||.|-.++.++ ..+++.++..+.++|+.||.|||.+ ||.|||+||+|||.....+ +||||
T Consensus 150 ~FYLVfEKm~GGplLshI~~~----~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKR----KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred eEEEEEecccCchHHHHHHHh----hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeec
Confidence 999999999999999988876 5689999999999999999999999 9999999999999975443 89999
Q ss_pred ccccccccC-----CCCcccccccccccCccCcccc-----CCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC----
Q 035998 889 FGLARLILS-----PYDTHVTTDLVGTLGYIPPEYG-----QASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKG---- 954 (1020)
Q Consensus 889 fg~~~~~~~-----~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~---- 954 (1020)
|.+...+.- +.......+.+|+..|||||+. ....|+.++|.||+|||+|-|++|.+||.+.-..+
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 988755321 2222233457889999999953 34578999999999999999999999997643322
Q ss_pred ---cccHHHHH-HHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 955 ---SRDLISWV-IRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 955 ---~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.-...+.. -...+++. -+++| ........+..+++...+..|+.+|.++.+++.
T Consensus 303 rGe~Cr~CQ~~LFesIQEGk-YeFPd-----kdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQEGK-YEFPD-----KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCCccHHHHHHHHHHHhccC-CcCCh-----hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 10111100 00111111 11111 111233445778999999999999999998876
No 318
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=8e-32 Score=291.53 Aligned_cols=251 Identities=28% Similarity=0.404 Sum_probs=204.6
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEecc--CceEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDRLLIY 817 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 817 (1020)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||||+++++++.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999876 688999999876542 3456789999999999999999999999988 8899999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 999999999998764 2789999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
...........++..|+|||...+...+.++||||+|+++|+|++|..||.... +................
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~---- 224 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKIGSSGEPPE---- 224 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhccccCCCcC----
Confidence 322112334568889999999988889999999999999999999999997543 11111111111011111
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+......+.+++.+|++.+|.+||++.|+++
T Consensus 225 -----~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 225 -----IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -----CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11122356889999999999999999999986
No 319
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.1e-32 Score=293.47 Aligned_cols=249 Identities=31% Similarity=0.519 Sum_probs=203.9
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
+|+..+.||+|++|.||+|... +++.|++|++........+.+.+|++.+++++|++++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999875 688999999987655456789999999999999999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 81 GGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 999999887642 4689999999999999999999998 999999999999999999999999999987643221
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccC
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYD 981 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 981 (1020)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||...... ........ ........+
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~-~~~~~~~~~---- 220 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM------KALFKIAT-NGPPGLRNP---- 220 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH------HHHHHHHh-cCCCCcCcc----
Confidence 23456788999999998888999999999999999999999999743211 11111111 111111111
Q ss_pred ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 982 KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 982 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......+.+++.+||+.||++|||+.|+++
T Consensus 221 ---~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 221 ---EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ---cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 001246889999999999999999999975
No 320
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.7e-33 Score=323.42 Aligned_cols=253 Identities=29% Similarity=0.434 Sum_probs=189.1
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEecc--------
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK-------- 810 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 810 (1020)
..+|+.+++||+|+||.||+++.+ ||+.||||++.... ......+.+|+..+.+++|||||+++..+.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 356888899999999999999977 89999999997654 23345688999999999999999988522110
Q ss_pred --------------------------------------------------------------------------------
Q 035998 811 -------------------------------------------------------------------------------- 810 (1020)
Q Consensus 811 -------------------------------------------------------------------------------- 810 (1020)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred -------------------------------CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 035998 811 -------------------------------NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLH 859 (1020)
Q Consensus 811 -------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH 859 (1020)
...||-||||+..++.+++++..-.. .....++++++|++||+|+|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~---~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS---QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch---hhHHHHHHHHHHHHHHHHHH
Confidence 01367889998888777777642111 35778999999999999999
Q ss_pred hcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc------C----------CCCcccccccccccCccCccccCCCC
Q 035998 860 QSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL------S----------PYDTHVTTDLVGTLGYIPPEYGQASV 923 (1020)
Q Consensus 860 ~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~------~----------~~~~~~~~~~~gt~~y~aPE~~~~~~ 923 (1020)
+. |||||||||.||++|.++.|||+|||+|.... + .......+..+||.-|+|||++.+..
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99 99999999999999999999999999998722 0 01112345578999999999887654
Q ss_pred ---CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccC
Q 035998 924 ---ATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLS 1000 (1020)
Q Consensus 924 ---~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~ 1000 (1020)
|+.|+|+||+|||++||+. ||+. ..+.+......+ ....+.. +.+ ...++..=..+|++|++
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~T-----sMERa~iL~~LR-~g~iP~~--~~f----~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGT-----SMERASILTNLR-KGSIPEP--ADF----FDPEHPEEASLIRWLLS 856 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCc-----hHHHHHHHHhcc-cCCCCCC--ccc----ccccchHHHHHHHHHhc
Confidence 9999999999999999996 4642 122222222232 2222221 111 22222334679999999
Q ss_pred CCCCCCCCHHHHHH
Q 035998 1001 ESPKVRPTTQQLVS 1014 (1020)
Q Consensus 1001 ~dP~~RPs~~evl~ 1014 (1020)
.||.+||||.|++.
T Consensus 857 hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 857 HDPSKRPTATELLN 870 (1351)
T ss_pred CCCccCCCHHHHhh
Confidence 99999999999986
No 321
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.7e-32 Score=305.14 Aligned_cols=262 Identities=29% Similarity=0.372 Sum_probs=195.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEecc--CceEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDRLL 815 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 815 (1020)
.++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++|+|++++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999864 689999999864432 2223466899999999999999999998765 45799
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
||||+++ +|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 86 v~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 788777653 24689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh---ccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE---NRE 971 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~ 971 (1020)
.... .......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||....+.+ ........... ...
T Consensus 159 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 159 GLPA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE---QLDLIIQLLGTPNESIW 233 (309)
T ss_pred CCcc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCChhhc
Confidence 4322 11222345778999998765 567899999999999999999999997543221 11111111000 000
Q ss_pred ccc----------cCccccCc---cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 972 SEV----------LDPFIYDK---QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 972 ~~~----------~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
... ........ ........+.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 00000000 00112345789999999999999999999986
No 322
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.5e-32 Score=295.10 Aligned_cols=249 Identities=23% Similarity=0.385 Sum_probs=204.0
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|+||.||++... +++.+|+|.+.... ......+.+|++++++++|+||+++.+++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999754 68899999987543 23345678899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++.+.......++++.++.++.|++.|++|||+. +++||||+|+||+++.++.+|++|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999877544456789999999999999999999999 9999999999999999999999999999876432
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
......++..|+|||...+..++.++|+||+|+++|||++|+.||...... ... .... .....
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~---~~~~-~~~~~------- 219 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ---DLR---YKVQ-RGKYP------- 219 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH---HHHh-cCCCC-------
Confidence 222356788999999999999999999999999999999999999643321 111 1111 11111
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........++.+++.+|++.+|++||++.|+++
T Consensus 220 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 --PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred --CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111233356899999999999999999999986
No 323
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.2e-32 Score=298.27 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=198.4
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
+|++.+.||+|++|.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5788999999999999999975 688999999876532 22356778999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++ +|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++++|||+++......
T Consensus 81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~- 154 (284)
T cd07836 81 DK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV- 154 (284)
T ss_pred Cc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-
Confidence 85 88888765422 34689999999999999999999998 99999999999999999999999999997653321
Q ss_pred cccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH-hh--c------c
Q 035998 901 THVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR-QE--N------R 970 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~--~------~ 970 (1020)
.......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||......+. ........ .+ . .
T Consensus 155 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 155 -NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ---LLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred -cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCCCChhhHHHHhc
Confidence 12233456889999998755 4578899999999999999999999975432211 11111000 00 0 0
Q ss_pred cccccC--ccc----cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 971 ESEVLD--PFI----YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 971 ~~~~~d--~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...... +.. .....+.....+.+++.+|++.||.+||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 000 00011122346789999999999999999999975
No 324
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.8e-32 Score=300.34 Aligned_cols=255 Identities=25% Similarity=0.407 Sum_probs=193.4
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcC-CCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQ-HPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. |+||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556788999999999999864 68999999987543 234557889999999996 99999999999999999999999
Q ss_pred ccCCChhhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 820 MENGSLDYWLHEK-LDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 820 ~~~g~L~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
+.. ++.++.... ......+++..+..++.|++.||+|||+.. +++||||||+||+++.++.+|++|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 554433221 112356899999999999999999999632 8999999999999999999999999999765432
Q ss_pred CCcccccccccccCccCccccCCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQAS---VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
. ......|+..|+|||++.+. .++.++||||+||++|||++|+.||.... .............
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~------ 227 (288)
T cd06616 162 I---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKGD------ 227 (288)
T ss_pred C---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCCC------
Confidence 2 12234578899999988765 68899999999999999999999996432 1111111111100
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+.+...........+.+++.+||+.+|++||+++++++
T Consensus 228 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 228 PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011111111223346889999999999999999999987
No 325
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.9e-32 Score=296.84 Aligned_cols=252 Identities=25% Similarity=0.403 Sum_probs=204.7
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.++.|+..+.||+|++|.||+|..+ +++.||+|++..... ..+.+.+|++.+++++|+|++++++++......++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888899999999999999876 688999999976544 45678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 96 ~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 96 YMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred ccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 999999999998752 3789999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
.. ......++..|+|||+..+..++.++||||||+++|+|++|+.||....+. ........ .......+
T Consensus 170 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~------~~~~~~~~-~~~~~~~~-- 238 (286)
T cd06614 170 KS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL------RALFLITT-KGIPPLKN-- 238 (286)
T ss_pred hh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHh-cCCCCCcc--
Confidence 21 122345788999999998888999999999999999999999998643221 11111111 11111111
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+.+++.+||+.+|.+||++.++++
T Consensus 239 -----~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 239 -----PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred -----hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1112346889999999999999999999986
No 326
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.1e-32 Score=294.57 Aligned_cols=251 Identities=25% Similarity=0.415 Sum_probs=205.7
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|+||.||++... +++.||+|++..... ...+.+.+|++++++++|||++++.+.+......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5788899999999999999865 688999999876532 4456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++.........+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999987654456789999999999999999999999 99999999999999999999999999998764432
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
.......+++.|+|||...+..++.++|+||+|+++|+|++|+.||..... .......... .....
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~~~----- 223 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL------LELALKILKG-QYPPI----- 223 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH------HHHHHHHhcC-CCCCC-----
Confidence 223345688899999998888899999999999999999999999964321 1111111111 11110
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+......+.+++.+||..+|++||++.++++
T Consensus 224 ----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 ----PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ----CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1112246889999999999999999999986
No 327
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.3e-32 Score=300.78 Aligned_cols=245 Identities=30% Similarity=0.410 Sum_probs=194.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
+.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+++++.++|||++++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56888999999999999999864 68999999886432 233456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||++ |++.+++... ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9997 4666665533 23589999999999999999999998 999999999999999999999999999875422
Q ss_pred CCCcccccccccccCccCccccC---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQ---ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.....++..|+|||++. .+.++.++||||||+++|||++|+.||...... ......... ....
T Consensus 168 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~------~~~~~~~~~-~~~~- 233 (307)
T cd06607 168 ------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQN-DSPT- 233 (307)
T ss_pred ------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH------HHHHHHhcC-CCCC-
Confidence 12346788999999863 456889999999999999999999998643211 111111111 0000
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ........+.+++.+||+.+|++||++.++++
T Consensus 234 ----~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 234 ----L---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred ----C---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 01123346889999999999999999999986
No 328
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=9.7e-32 Score=292.07 Aligned_cols=249 Identities=23% Similarity=0.281 Sum_probs=191.7
Q ss_pred HHHHHhccCCCcCCee--eccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEecc
Q 035998 735 DDILESTNNFDQANII--GCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMHK 810 (1020)
Q Consensus 735 ~~~~~~~~~~~~~~~l--g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 810 (1020)
.+.....++|++.+.+ |+|+||.||+++.+ ++..+|+|.+...... . .|+.....+ +|||++++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~--~e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---A--IEPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---h--hhHHHHHHhhcCCCEEEEEEEEecC
Confidence 3344445677777776 99999999999864 6888999998653211 1 122222223 799999999999999
Q ss_pred CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC-CeEEeec
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF-GAHLADF 889 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Df 889 (1020)
+..++||||+++++|.+++... ..++++.+..++.|+++|++|||+. +++||||||+||+++.++ .++++||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKE----GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 9999999999999999998764 3789999999999999999999999 999999999999999988 9999999
Q ss_pred cccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
|.++..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||....... .+...+........
T Consensus 155 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~ 227 (267)
T PHA03390 155 GLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLKRQQKKL 227 (267)
T ss_pred ccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHHhhcccC
Confidence 998765322 22457889999999998899999999999999999999999997443221 11111111111000
Q ss_pred ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 035998 970 RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT-TQQLVS 1014 (1020)
Q Consensus 970 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 1014 (1020)
.. .......+.+++.+||+.+|.+||+ ++++++
T Consensus 228 ---~~---------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 228 ---PF---------IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ---Cc---------ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 0122346889999999999999996 699875
No 329
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4.4e-32 Score=297.92 Aligned_cols=260 Identities=25% Similarity=0.319 Sum_probs=195.7
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
|++.+.||+|++|.||+|... +|+.||+|++.... ......+.+|++++++++|||++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 677889999999999999864 79999999987543 222356788999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
+ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++++|||.++......
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~- 153 (283)
T cd07835 81 D-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV- 153 (283)
T ss_pred C-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-
Confidence 5 689888875421 3689999999999999999999998 99999999999999999999999999997653221
Q ss_pred cccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcc---------
Q 035998 901 THVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENR--------- 970 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 970 (1020)
.......++..|+|||++.+. .++.++||||+|+++|+|++|+.||...... ...............
T Consensus 154 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 154 -RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI--DQLFRIFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred -cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHHhhhhhhc
Confidence 112233568899999987654 5788999999999999999999999643221 111111110000000
Q ss_pred ------cccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 971 ------ESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 971 ------~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......+. .....+.....+.+++.+|++.||++||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 231 PDYKPTFPKWARQD-LSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhhcccccccc-hhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000000 00001112246789999999999999999999985
No 330
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.3e-32 Score=309.78 Aligned_cols=262 Identities=26% Similarity=0.357 Sum_probs=194.0
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC-----ce
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN-----DR 813 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 813 (1020)
+++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|++++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999985 468999999986432 233456788999999999999999999876543 47
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++|+||+++ ++..++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++
T Consensus 84 ~lv~e~~~~-~l~~~~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELMET-DLYKLIKT-----QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhccc-CHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence 899999975 77666653 3589999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCc-ccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc--
Q 035998 894 LILSPYDT-HVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN-- 969 (1020)
Q Consensus 894 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-- 969 (1020)
........ .......|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||...... .............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~---~~~~~~~~~~~~~~~ 231 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL---HQLNLILGVLGTPSQ 231 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCCH
Confidence 65432211 11223567889999997644 56899999999999999999999999643211 1111111100000
Q ss_pred -ccccccC-------------cccc-CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 -RESEVLD-------------PFIY-DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 -~~~~~~d-------------~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....+.+ +... ....+.....+.+++.+||+.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~ 291 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA 291 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000 0000 0000112345889999999999999999999987
No 331
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-32 Score=328.15 Aligned_cols=260 Identities=29% Similarity=0.471 Sum_probs=206.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC----C----CCEEEEEEecCCchh-hHHHHHHHHHHHHHc-CCCccceEeeEEeccC
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP----D----GRNVAIKRLSGDCGQ-MEREFRAEVEALSRA-QHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 811 (1020)
++..+.+.+|+|+||.|++|... . ...||||.++..... ..+.+..|+++|+.+ +|+||+.++|+|..+.
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34456679999999999999742 1 457999999866543 456789999999999 5999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcC-----CCC-------CCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKL-----DGP-------SSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD 879 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~-----~~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 879 (1020)
..++|+||+..|+|.+|++... ... ..++..+.+.++.|||.||+||++. ++||||+.++|||++
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEec
Confidence 9999999999999999998765 011 2488999999999999999999999 999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCcccccc-cccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCccc
Q 035998 880 GNFGAHLADFGLARLILSPYDTHVTTD-LVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRD 957 (1020)
Q Consensus 880 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~ 957 (1020)
++..+||+|||+|+............. ..-+..|||||.+....++.|+|||||||++||++| |..||.+... ..+
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~--~~~ 530 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP--TEE 530 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc--HHH
Confidence 999999999999997654333321211 113456999999999999999999999999999999 9999975321 112
Q ss_pred HHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 958 LISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
..++ .+...+. ..+..+..+++++|+.||+.+|++||++.++++.|+..
T Consensus 531 l~~~---l~~G~r~----------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 531 LLEF---LKEGNRM----------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHHH---HhcCCCC----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 2221 2111111 12223345799999999999999999999999998864
No 332
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-32 Score=321.65 Aligned_cols=266 Identities=20% Similarity=0.249 Sum_probs=187.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC--CCEEEEE------------------EecCCchhhHHHHHHHHHHHHHcCCCcc
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD--GRNVAIK------------------RLSGDCGQMEREFRAEVEALSRAQHPNL 800 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~h~ni 800 (1020)
.++|++.+.||+|+||+||++..+. +..+++| .... .......+.+|++++++++||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCCc
Confidence 4689999999999999999987532 2222222 1111 12234568899999999999999
Q ss_pred ceEeeEEeccCceEEEEEeccCCChhhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc
Q 035998 801 VHLQGYCMHKNDRLLIYSFMENGSLDYWLHEK-LDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD 879 (1020)
Q Consensus 801 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 879 (1020)
+++++++...+..|+|+|++.+ ++..++... ...........+..++.|++.||+|||++ +||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9999999999999999999864 666665432 12222344667788999999999999999 999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCC-CCCCCCCCcccH
Q 035998 880 GNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRP-MDMCKPKGSRDL 958 (1020)
Q Consensus 880 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p-f~~~~~~~~~~~ 958 (1020)
.++.+||+|||+++.+.... ........||..|+|||++.+..++.++|||||||++|||++|..+ +...........
T Consensus 302 ~~~~vkL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKER-EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CCCCEEEEeCCCceecCccc-ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 99999999999998764322 1222345789999999999999999999999999999999998754 433222211122
Q ss_pred HHHHHHHHhhcccccccCcc-----------cc--CccCH------HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 959 ISWVIRMRQENRESEVLDPF-----------IY--DKQHD------KEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 959 ~~~~~~~~~~~~~~~~~d~~-----------~~--~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......... ...++.++. +. ....+ .....+.+++.+|+++||.+|||+.|+++
T Consensus 381 ~~~~~~~~~--~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 381 LKIIDSLSV--CDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHhccc--ChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 111111100 000000000 00 00000 01124677899999999999999999987
No 333
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.8e-32 Score=307.99 Aligned_cols=262 Identities=23% Similarity=0.307 Sum_probs=195.5
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc------
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK------ 810 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 810 (1020)
..++|+..+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3578999999999999999999864 78999999986432 22345677899999999999999999988643
Q ss_pred CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
...++||||+++ +|.+++.. .++...+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 346899999965 77776653 278889999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcc------------cH
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSR------------DL 958 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~------------~~ 958 (1020)
+++..... .......++..|+|||.+.+..++.++||||+||++|+|++|+.||......... .+
T Consensus 164 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 164 LARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEF 240 (353)
T ss_pred cceeCCCC---CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 99875332 1223346788999999999999999999999999999999999999643211000 00
Q ss_pred HHHHHH---HHhhcc-------cccccCcccc----CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 959 ISWVIR---MRQENR-------ESEVLDPFIY----DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 959 ~~~~~~---~~~~~~-------~~~~~d~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...... ...... .......... ..........+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000000 000000 0000000000 0001123446789999999999999999999986
No 334
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1e-31 Score=296.21 Aligned_cols=257 Identities=21% Similarity=0.273 Sum_probs=183.0
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC----CCEEEEEEecCCchhh--H---------HHHHHHHHHHHHcCCCccceEee
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD----GRNVAIKRLSGDCGQM--E---------REFRAEVEALSRAQHPNLVHLQG 805 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~--~---------~~~~~E~~~l~~l~h~niv~l~~ 805 (1020)
.++|++.+.||+|+||.||+|...+ +..+|+|+........ + .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999998654 3456666543222111 1 11122334455668999999999
Q ss_pred EEeccC----ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC
Q 035998 806 YCMHKN----DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN 881 (1020)
Q Consensus 806 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 881 (1020)
++.... ..++++|++.. ++.+.+... ...++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 766543 23577776643 555554432 2356788899999999999999999 99999999999999999
Q ss_pred CCeEEeeccccccccCCCCc-----ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcc
Q 035998 882 FGAHLADFGLARLILSPYDT-----HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSR 956 (1020)
Q Consensus 882 ~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~ 956 (1020)
+.++|+|||+++........ .......||+.|+|||+..+..++.++||||+||++|||++|+.||.........
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 99999999999876432111 1122346899999999999999999999999999999999999999765322211
Q ss_pred cHH---HHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 957 DLI---SWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 957 ~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
... .......... .... .....+.+++..|++.+|++||+++++++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 243 IHAAKCDFIKRLHEGK---------IKIK---NANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHhHHHHHHHhhhhh---------hccC---CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111 1111111110 0001 11246889999999999999999999998763
No 335
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=5.5e-32 Score=297.01 Aligned_cols=257 Identities=25% Similarity=0.263 Sum_probs=192.2
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-hhhHHHHHHHHHHHHHcC-CCccceEeeEEecc--CceEEEEE
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-GQMEREFRAEVEALSRAQ-HPNLVHLQGYCMHK--NDRLLIYS 818 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 818 (1020)
|++.+.||+|+||.||+|... +++.||+|+++... ........+|+.+++++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999854 68899999987542 222234457888888885 99999999999987 88999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++ ++.+++... ...+++.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.++.....
T Consensus 81 ~~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMDM-NLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCCc-cHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 9975 777776643 24689999999999999999999999 9999999999999999 99999999999876432
Q ss_pred CCcccccccccccCccCccccC-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHh----------
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQ-ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQ---------- 967 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~---------- 967 (1020)
.. .....++..|+|||... ++.++.++||||+||++|||++|+.||......+ .+.+......
T Consensus 153 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 153 PP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD---QIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred CC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH---HHHHHHHHcCCCCHHHHHhh
Confidence 21 12345788999999754 4567899999999999999999999997543221 1111111100
Q ss_pred -hcccccccCcccc----CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 968 -ENRESEVLDPFIY----DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 968 -~~~~~~~~d~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.........+... ....+.....+.+++.+||+.+|++||+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000000000000 0001123457899999999999999999999986
No 336
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-33 Score=277.92 Aligned_cols=251 Identities=24% Similarity=0.309 Sum_probs=194.1
Q ss_pred cCCCcC-CeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEec----cCceE
Q 035998 742 NNFDQA-NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMH----KNDRL 814 (1020)
Q Consensus 742 ~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~~ 814 (1020)
++|.+. ++||-|-.|.|..+..+ +|+.+|+|++... ...++|++.--.. .|||||.++++|.. .....
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 445543 67999999999999764 7899999998643 3456777764443 79999999999864 35667
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc---CCCCeEEeeccc
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD---GNFGAHLADFGL 891 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~ 891 (1020)
+|||.|+||.|...+.++ +...+++.++..|++||+.|+.|||+. .|.||||||+|+|.. .+..+|++|||+
T Consensus 136 iVmE~meGGeLfsriq~~--g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDR--GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eeeecccchHHHHHHHHc--ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccc
Confidence 999999999999998876 446799999999999999999999999 999999999999996 456699999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
|+....+ ......+-|+.|.|||++..++|+..+|+||+||+||-|++|.+||..........-+....+.. .
T Consensus 211 AK~t~~~---~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g----q 283 (400)
T KOG0604|consen 211 AKETQEP---GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG----Q 283 (400)
T ss_pred ccccCCC---ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc----C
Confidence 9976432 22344567999999999999999999999999999999999999997544322211111111110 1
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
-++.+| ......+...++|+.+++.+|.+|.|+.+++.
T Consensus 284 y~FP~p-----EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 284 YEFPEP-----EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ccCCCh-----hHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 111111 11233456789999999999999999999986
No 337
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-32 Score=302.62 Aligned_cols=247 Identities=26% Similarity=0.345 Sum_probs=204.3
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchh--hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQ--MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
...|.+.+.||+|.|++|..|++. ++..||||.+.+..-. ..+.+.+|+++|..++|||||+++++.......|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 456888999999999999999864 6899999999876522 2345889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+.+|.+.+|+... ..+.+..+..++.|+.+|++|||++ .|||||||++||+++.+..+||+|||++..+.
T Consensus 135 eya~~ge~~~yl~~~----gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 135 EYASGGELFDYLVKH----GRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred EeccCchhHHHHHhc----ccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec-
Confidence 999999999999875 4455688899999999999999999 99999999999999999999999999998873
Q ss_pred CCCcccccccccccCccCccccCCCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVA-TYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
........+|++.|.|||++.+..| ++++|+||+|+++|-|+.|..||++..-.+....+-. ...++
T Consensus 207 --~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~-----gk~rI----- 274 (596)
T KOG0586|consen 207 --YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR-----GKYRI----- 274 (596)
T ss_pred --ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee-----eeecc-----
Confidence 3345566899999999999988765 6899999999999999999999986544332221110 00000
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
|.+ ...+..+++++++-.+|.+|++.+++.+
T Consensus 275 p~~-------ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 275 PFY-------MSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred cce-------eechhHHHHHHhhccCccccCCHHHhhh
Confidence 000 1124568999999999999999999976
No 338
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.8e-32 Score=294.99 Aligned_cols=249 Identities=27% Similarity=0.370 Sum_probs=199.4
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|+||.||+|..+ +|..||+|.+.... ....+.+.+|++++++++|+||+++++.+......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4788899999999999999865 58899999986542 12345678999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC-eEEeeccccccccCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG-AHLADFGLARLILSP 898 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~~~~~~~~ 898 (1020)
+++++|.+++.+. ....+++..+..++.|+++|++|||+. +++|+||||+||++++++. +|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999998754 223578999999999999999999999 9999999999999998864 699999999776432
Q ss_pred CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
. .......|++.|+|||+..+..++.++|+||+|+++|||++|+.||..... .......... ....
T Consensus 156 ~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~~----- 221 (257)
T cd08225 156 M--ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKICQG-YFAP----- 221 (257)
T ss_pred c--ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHhcc-cCCC-----
Confidence 2 122234688899999998888899999999999999999999999964321 1111111111 1111
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..+.....+.+++.+||+.+|++||++.|+++
T Consensus 222 ----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 222 ----ISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ----CCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 01112246889999999999999999999986
No 339
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-33 Score=322.36 Aligned_cols=258 Identities=24% Similarity=0.269 Sum_probs=205.5
Q ss_pred HHHHHHhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEec
Q 035998 734 IDDILESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMH 809 (1020)
Q Consensus 734 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 809 (1020)
+.+++-..++|+++++||+|+||.|..++.+ +++.||+|++.+.. .....-|..|..+|..-+.+.|+.++-.|++
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3455556788999999999999999999875 68889999998743 2233568899999998899999999999999
Q ss_pred cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 810 KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 810 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
+...|+|||||+||||-..+... ..++++.++.++..|+.||.-+|+. |+|||||||+|||+|..|++|++||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~----~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKF----DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccc
Confidence 99999999999999999988765 3789999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCcccccccccccCccCccccC----C-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHH-HHH
Q 035998 890 GLARLILSPYDTHVTTDLVGTLGYIPPEYGQ----A-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLIS-WVI 963 (1020)
Q Consensus 890 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~-~~~ 963 (1020)
|.|-.+..++ .......+|||.|++||++. + +.|+..+|+||+||++|||+.|..||... .++. +..
T Consensus 220 GsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad------slveTY~K 292 (1317)
T KOG0612|consen 220 GSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD------SLVETYGK 292 (1317)
T ss_pred hhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH------HHHHHHHH
Confidence 9998875433 33455689999999999763 3 67899999999999999999999999742 2222 222
Q ss_pred HHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 035998 964 RMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT---TQQLVS 1014 (1020)
Q Consensus 964 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1014 (1020)
.+..... -.+++ ..+......+||++.+. +|+.|.. ++|+..
T Consensus 293 Im~hk~~-l~FP~-------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 293 IMNHKES-LSFPD-------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred Hhchhhh-cCCCc-------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 2211111 11111 11133457788888776 6788877 777754
No 340
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=6.8e-32 Score=295.33 Aligned_cols=241 Identities=28% Similarity=0.323 Sum_probs=186.1
Q ss_pred eeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHH---cCCCccceEeeEEeccCceEEEEEecc
Q 035998 749 IIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSR---AQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 749 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
+||+|+||.||+|... +++.||+|.+..... .....+.+|..+++. .+||+++.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 688999998865421 112234445444443 379999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||++......
T Consensus 81 ~~~L~~~i~~~----~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--- 150 (279)
T cd05633 81 GGDLHYHLSQH----GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--- 150 (279)
T ss_pred CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecccc---
Confidence 99999888754 4689999999999999999999999 9999999999999999999999999998755322
Q ss_pred ccccccccccCccCccccC-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQ-ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
......|+..|+|||... +..++.++||||+||++|||++|..||......... .. ....... ...
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~---~~~~~~~------~~~-- 217 (279)
T cd05633 151 -KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EI---DRMTLTV------NVE-- 217 (279)
T ss_pred -CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HH---HHHhhcC------CcC--
Confidence 122346899999999876 456889999999999999999999999754332211 11 1111000 000
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
.+.....++.+++.+|++.||++|| +++++++
T Consensus 218 --~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 218 --LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred --CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 1111234688999999999999999 5999887
No 341
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.1e-31 Score=291.19 Aligned_cols=242 Identities=25% Similarity=0.326 Sum_probs=195.3
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 750 IGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
||+|++|.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999875 48899999987543 23346789999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccc
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
.+++... ..+++..+..++.|++.||+|+|+. +++|+||+|+||+++.++.++++|||.++...... ...
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~ 150 (262)
T cd05572 81 WTILRDR----GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTW 150 (262)
T ss_pred HHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccc
Confidence 9998764 3578999999999999999999998 99999999999999999999999999998764321 223
Q ss_pred ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 906 DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
...++..|+|||...+..++.++|+||+|+++|+|++|..||...... ................ .+.
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~---------~~~ 217 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED----PMEIYNDILKGNGKLE---------FPN 217 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC----HHHHHHHHhccCCCCC---------CCc
Confidence 346788999999988888999999999999999999999999754321 1111111111000000 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 035998 986 KEMLRVLDIACLCLSESPKVRPT-----TQQLVS 1014 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1014 (1020)
.....+.+++.+||+.+|++||+ ++|+++
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 11346899999999999999999 888876
No 342
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=7.6e-32 Score=294.94 Aligned_cols=244 Identities=26% Similarity=0.367 Sum_probs=192.2
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 750 IGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
||+|+||+||+|... +|+.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999754 68899999986532 12234567899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccc
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
.+++.... ...+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+..... .....
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~---~~~~~ 152 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIK 152 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc---CCccc
Confidence 99987642 24689999999999999999999999 999999999999999999999999999876532 11223
Q ss_pred ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 906 DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
...++..|+|||...+..++.++||||+|+++|+|++|+.||...........+.. .. ... +. ..+.
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~-~~~-------~~---~~~~ 219 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR--RT-LEM-------AV---EYPD 219 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh--cc-ccc-------cc---cCCc
Confidence 34678899999998888899999999999999999999999975433211111110 00 000 00 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 986 KEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
.....+.+++.+||+.+|.+|| ++.++++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 1223578999999999999999 6766764
No 343
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.7e-32 Score=297.73 Aligned_cols=260 Identities=27% Similarity=0.344 Sum_probs=197.0
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc--CceEEEEE
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDRLLIYS 818 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 818 (1020)
|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++|||++++++++.+. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 667889999999999999876 58899999998663 33345688899999999999999999999888 78999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++ +|.+++... ...+++..+..++.|+++|++|||+. +++|+||+|+||++++++.+|++|||.+......
T Consensus 81 ~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9975 888777643 24689999999999999999999999 9999999999999999999999999999876443
Q ss_pred CCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc---ccccc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN---RESEV 974 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 974 (1020)
.. .......++..|+|||...+ ..++.++||||||+++|||++|+.||...... ............. .....
T Consensus 154 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 154 NS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL---EQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred Cc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCchhhcccc
Confidence 21 11223456788999997654 46789999999999999999999999754321 1111111110000 00000
Q ss_pred cC--------------ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LD--------------PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+ ..........+...+.+++.+||+.+|.+||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00 00000000111456889999999999999999999986
No 344
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.98 E-value=8.6e-32 Score=296.36 Aligned_cols=244 Identities=24% Similarity=0.338 Sum_probs=195.9
Q ss_pred CCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 747 ANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
..+||+|+||.||+|... +++.||||++..........+.+|+.+++.++|+|++++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 467999999999999864 7889999998655444556788999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccc
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||++....... ....
T Consensus 105 ~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~ 174 (292)
T cd06657 105 TDIVTH-----TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRK 174 (292)
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc--cccc
Confidence 987754 2478899999999999999999999 99999999999999999999999999987653321 1223
Q ss_pred ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 906 DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
...+++.|+|||...+..++.++|+||+|+++|+|++|+.||..... ............ .. ... ..
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~------~~~~~~~~~~~~-~~-----~~~--~~ 240 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMKMIRDNLP-PK-----LKN--LH 240 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhhCC-cc-----cCC--cc
Confidence 35678899999998888899999999999999999999999864221 111111111100 00 000 01
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 986 KEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.....+.+++.+||+.+|.+||++.++++
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 12235788999999999999999999987
No 345
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.98 E-value=4.7e-32 Score=301.98 Aligned_cols=267 Identities=25% Similarity=0.297 Sum_probs=193.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCc-----
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKND----- 812 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 812 (1020)
-++|++.+.||+|+||.||+|... +++.||||.+.... ......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357999999999999999999865 68899999886432 2223456689999999999999999999876543
Q ss_pred ---eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 813 ---RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 813 ---~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
.++||||+.+ ++.+++... ...+++++++.++.|++.||+|||++ +++|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 4899999975 777776543 23689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCc--ccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH
Q 035998 890 GLARLILSPYDT--HVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR 966 (1020)
Q Consensus 890 g~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 966 (1020)
|.+......... .......++..|+|||...+. .++.++||||+|+++|||++|+.||...........+.......
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999876432211 111234567889999987654 47889999999999999999999997543221111111111000
Q ss_pred hhcccccc-----cCc-cccCcc---------CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 967 QENRESEV-----LDP-FIYDKQ---------HDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 967 ~~~~~~~~-----~d~-~~~~~~---------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.....+.. .+. ...... .......+.+++.+||+.||++||+++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00000000 000 000000 0001234678999999999999999999985
No 346
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.98 E-value=1.2e-31 Score=300.63 Aligned_cols=259 Identities=24% Similarity=0.294 Sum_probs=191.1
Q ss_pred eeecc--CCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 749 IIGCG--GFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 749 ~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
.||+| +||+||+|+.. +|+.||+|++.... ....+.+.+|+.+++.++||||++++++|...+..++|+||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 45666 99999999864 78999999987543 223467889999999999999999999999999999999999999
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc-
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH- 902 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~- 902 (1020)
++.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+..........
T Consensus 85 ~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 85 SANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 9999988653 23588999999999999999999998 99999999999999999999999998654432211110
Q ss_pred ----cccccccccCccCccccCCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHH------------
Q 035998 903 ----VTTDLVGTLGYIPPEYGQAS--VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIR------------ 964 (1020)
Q Consensus 903 ----~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~------------ 964 (1020)
......++..|+|||++.+. .++.++||||+||++|||++|+.||....... ........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFP 237 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccc
Confidence 01112345679999998764 47899999999999999999999997543211 00000000
Q ss_pred ----HH----------------hhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 965 ----MR----------------QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 965 ----~~----------------~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. .........+..............+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00 000000000111111112334557899999999999999999999986
No 347
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=1.6e-32 Score=270.54 Aligned_cols=248 Identities=23% Similarity=0.416 Sum_probs=192.6
Q ss_pred CcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEecc
Q 035998 745 DQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
+.+..||.|..|.||+++++ +|...|||.+..... +..+.+...+.++.+- .+|+||+-+|||..+...++.||.|.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 45677999999999999976 588999999876543 2234566777777665 48999999999999999999999985
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
. -.+.++++. ..++++..+-++...+..||.||.++. +|+|||+||+|||+|+.|.+|+||||.+-++.+ .
T Consensus 175 ~-C~ekLlkri---k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd---S 245 (391)
T KOG0983|consen 175 T-CAEKLLKRI---KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD---S 245 (391)
T ss_pred H-HHHHHHHHh---cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec---c
Confidence 3 445555543 245888888899999999999998764 999999999999999999999999999988754 3
Q ss_pred ccccccccccCccCccccCC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 902 HVTTDLVGTLGYIPPEYGQA---SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
...+...|.+.|||||-+.. ..|+.++||||||+.++|+.||+.||..+.. +.+....+.. ..+..+++.
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t--dFe~ltkvln-----~ePP~L~~~ 318 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT--DFEVLTKVLN-----EEPPLLPGH 318 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc--cHHHHHHHHh-----cCCCCCCcc
Confidence 44556789999999997754 4788999999999999999999999976532 1222222221 111222221
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.. ....+.+++..|++.|+.+||...++++
T Consensus 319 ~g------FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 319 MG------FSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred cC------cCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 11 1235789999999999999999998875
No 348
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=2.5e-31 Score=286.89 Aligned_cols=247 Identities=30% Similarity=0.470 Sum_probs=201.5
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|++.+.||+|++|.||+|+.. +++.||+|.+..... .....+.+|++++++++|||++++++++.+....+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999865 678999999976643 3446789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+++++|.+++... ..++++.+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999988754 4689999999999999999999999 99999999999999999999999999998764332
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
. ......++..|+|||...+..++.++||||+|+++|+|++|+.||..... . ......... .... .
T Consensus 154 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~--~----~~~~~~~~~-~~~~-~---- 219 (254)
T cd06627 154 K--DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP--M----AALFRIVQD-DHPP-L---- 219 (254)
T ss_pred c--cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH--H----HHHHHHhcc-CCCC-C----
Confidence 2 12335678899999998888889999999999999999999999964321 1 111111111 0000 0
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+......+.+++.+|++.+|++||++.+++.
T Consensus 220 ----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 ----PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ----CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1111246789999999999999999999975
No 349
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.98 E-value=6.5e-32 Score=299.64 Aligned_cols=264 Identities=29% Similarity=0.345 Sum_probs=195.9
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC-----
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN----- 811 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 811 (1020)
..++|++.+.||+|+||.||+|..+ +++.||+|++.... ......+.+|++++++++|||++++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4567899999999999999999975 58899999987543 223356778999999999999999999987654
Q ss_pred -----ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEE
Q 035998 812 -----DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHL 886 (1020)
Q Consensus 812 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 886 (1020)
..++|+||+++ ++..++... ...++++.+..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEe
Confidence 68899999986 666665543 34689999999999999999999999 9999999999999999999999
Q ss_pred eeccccccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH
Q 035998 887 ADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM 965 (1020)
Q Consensus 887 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 965 (1020)
+|||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||..... ..........
T Consensus 158 ~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~---~~~~~~~~~~ 233 (302)
T cd07864 158 ADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE---LAQLELISRL 233 (302)
T ss_pred CcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHH
Confidence 99999986543221 11122345778999997754 4578999999999999999999999974322 1111111111
Q ss_pred Hhhcc---cccccCcccc-------------CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 966 RQENR---ESEVLDPFIY-------------DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 966 ~~~~~---~~~~~d~~~~-------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..... .......... ..........+.+++.+||+.||.+||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11000 0000000000 0000012346889999999999999999999985
No 350
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.98 E-value=2.6e-32 Score=307.18 Aligned_cols=260 Identities=24% Similarity=0.307 Sum_probs=195.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc-----Cc
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK-----ND 812 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 812 (1020)
.++|.+.+.||+|+||.||+|+.. +++.||||.+.... ......+.+|+++++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 467999999999999999999854 68999999986532 22345677899999999999999999988644 34
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLA 892 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 892 (1020)
.++||||+. ++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS----QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999996 6787777643 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc--
Q 035998 893 RLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN-- 969 (1020)
Q Consensus 893 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-- 969 (1020)
+...... .......++..|+|||.+.. ..++.++||||+||++|+|++|+.||....... ............
T Consensus 156 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~ 230 (337)
T cd07858 156 RTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH---QLKLITELLGSPSE 230 (337)
T ss_pred cccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCCh
Confidence 8764321 22234567889999997654 568899999999999999999999996432111 111000000000
Q ss_pred ----------------ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 ----------------RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 ----------------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......++... ...+.....+.+++.+||+.+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence 00000000000 001123346789999999999999999999987
No 351
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.98 E-value=1.4e-31 Score=298.68 Aligned_cols=245 Identities=30% Similarity=0.409 Sum_probs=193.4
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
.|+..+.||+|+||.||+|... ++..||+|++.... ......+.+|++++++++|||++++++++.+.+..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3677889999999999999864 68899999986432 2334568889999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+.+ ++.+++... ...+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++++|||++.....
T Consensus 106 ~~~g-~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~- 177 (317)
T cd06635 106 YCLG-SASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP- 177 (317)
T ss_pred CCCC-CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC-
Confidence 9975 676666543 24589999999999999999999999 999999999999999999999999999875422
Q ss_pred CCcccccccccccCccCcccc---CCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYG---QASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
.....++..|+|||++ ..+.++.++||||+||++|||++|+.||...... ............ .
T Consensus 178 -----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~~~~~-~-- 243 (317)
T cd06635 178 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQNESP-T-- 243 (317)
T ss_pred -----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhccCC-C--
Confidence 1234678899999986 3467889999999999999999999998643211 111111111100 0
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
.........+.+++.+||+.+|.+||++.++++.
T Consensus 244 ------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 244 ------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred ------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 0011223458899999999999999999999874
No 352
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.98 E-value=7.6e-32 Score=296.08 Aligned_cols=259 Identities=27% Similarity=0.351 Sum_probs=198.8
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
|++.+.||+|++|.||+|... +++.+|+|++..... .....+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567889999999999999865 688999999875532 23467888999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
++ ++.+++... ...+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++++|||.+.......
T Consensus 81 ~~-~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 75 787777653 24689999999999999999999999 99999999999999999999999999998764432
Q ss_pred cccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh---cccccccC
Q 035998 901 THVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE---NRESEVLD 976 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d 976 (1020)
.......++..|+|||...+. .++.++|+||+|+++|+|++|+.||...... +........... .......+
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI---DQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCchHhcccchh
Confidence 122334677889999988776 7899999999999999999999999643321 111111110000 00000000
Q ss_pred -------------ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 977 -------------PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 977 -------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........+....++.+++.+||+.||.+||++++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000111223457889999999999999999999985
No 353
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.98 E-value=2.6e-32 Score=306.94 Aligned_cols=263 Identities=23% Similarity=0.349 Sum_probs=196.8
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEec----cCce
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMH----KNDR 813 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 813 (1020)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367999999999999999999864 689999999876432 234567789999999999999999998763 3457
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++||||+. ++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 84 ~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD----QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 89999996 5888877543 4589999999999999999999999 99999999999999999999999999997
Q ss_pred cccCCCCc--ccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc-
Q 035998 894 LILSPYDT--HVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN- 969 (1020)
Q Consensus 894 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~- 969 (1020)
........ .......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||....... .+..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~---~~~~~~~~~g~~~ 232 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH---QLKLILSVLGSPS 232 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH---HHHHHHHHhCCCh
Confidence 65432211 11223568889999998755 568899999999999999999999996543211 111111100000
Q ss_pred --c--------c----ccc--cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 --R--------E----SEV--LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 --~--------~----~~~--~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. . ... ..+.......+.....+.+++.+|++.+|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 0 000 0000000011122456899999999999999999999987
No 354
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.98 E-value=8.6e-32 Score=297.33 Aligned_cols=263 Identities=23% Similarity=0.295 Sum_probs=193.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
++|++.+.||+|++|.||+|..+ +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46889999999999999999865 688999998865422 233567889999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC-CCCeEEeeccccccccC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG-NFGAHLADFGLARLILS 897 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~~~ 897 (1020)
|++ +++.+++... .....++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+|++|||+++....
T Consensus 82 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 4777776543 223457888899999999999999999 9999999999999985 56799999999976533
Q ss_pred CCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh--ccccc-
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE--NRESE- 973 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~- 973 (1020)
.. .......+++.|+|||++.+ ..++.++||||+|+++|+|+||+.||......+ ...........+ .....
T Consensus 156 ~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 156 PV--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID--ELFKIFRILGTPNEETWPGV 231 (294)
T ss_pred Cc--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChhhcccc
Confidence 21 11233457889999998765 457899999999999999999999996432211 111100000000 00000
Q ss_pred --ccC-----ccccC----ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 974 --VLD-----PFIYD----KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 974 --~~d-----~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..+ +.... ...+.....+.+++.+|++.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 00000 001112235789999999999999999999987
No 355
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.98 E-value=1e-31 Score=291.17 Aligned_cols=241 Identities=25% Similarity=0.315 Sum_probs=185.5
Q ss_pred CeeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHH-HHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 748 NIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEAL-SRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
+.||+|+||.||+|... +++.||+|++..... .....+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999864 688999999875431 1122344555444 345899999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+|++|||+++....
T Consensus 82 ~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKTL----GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 9999998754 4578999999999999999999999 999999999999999999999999999875422
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
.....++..|+|||...+..++.++||||+|+++|||++|..||...... ... ..... .... ..+ .
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~---~~~~~-~~~~--~~~----~ 215 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD---AVF---DNILS-RRIN--WPE----E 215 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH---HHH---HHHHh-cccC--CCC----c
Confidence 22346788999999988888999999999999999999999999643321 111 11111 0000 000 0
Q ss_pred cCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 983 QHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 983 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........+.+++.+||+.+|++||++.++.+
T Consensus 216 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 216 VKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred ccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 01112346889999999999999997654433
No 356
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.98 E-value=9.7e-32 Score=302.85 Aligned_cols=262 Identities=27% Similarity=0.352 Sum_probs=194.9
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHc-CCCccceEeeEEecc--CceE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHK--NDRL 814 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~~ 814 (1020)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++++ +||||+++++++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 467889999999999999999865 58899999885432 22234577899999999 999999999998654 3578
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
+||||++ ++|..++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.++.
T Consensus 86 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 9999997 4888877642 678889999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCc---ccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh--
Q 035998 895 ILSPYDT---HVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE-- 968 (1020)
Q Consensus 895 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-- 968 (1020)
....... .......|+..|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~ 233 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ---LEKIIEVIGPPS 233 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCC
Confidence 6433221 22234568889999997654 5678899999999999999999999964332111 1110000000
Q ss_pred ---------cccccccC------ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 ---------NRESEVLD------PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ---------~~~~~~~d------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......+ ........+.....+.+++.+||+.||++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 00000000 00000001112346889999999999999999999987
No 357
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=4.4e-31 Score=286.75 Aligned_cols=250 Identities=25% Similarity=0.360 Sum_probs=195.7
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc-----hhhHHHHHHHHHHHHHcCCCccceEeeEEecc--Cce
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC-----GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK--NDR 813 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 813 (1020)
.+|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46889999999999999999864 68899999875321 22345788999999999999999999998764 457
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++++||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY----GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 8999999999999988753 3478889999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCC-cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccc
Q 035998 894 LILSPYD-THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRES 972 (1020)
Q Consensus 894 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1020)
....... ........++..|+|||...+..++.++|+|||||++|+|++|+.||...... ..+ ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~---~~~~~~~~-- 226 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---AAI---FKIATQPT-- 226 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---HHH---HHHHcCCC--
Confidence 6532111 11112346888999999998888999999999999999999999999643211 111 11111100
Q ss_pred cccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 973 EVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 973 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+. .+......+.+++.+|++ +|.+||++.++++
T Consensus 227 ---~~~----~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 227 ---KPM----LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ---CCC----CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 011 112223468899999999 5799999998875
No 358
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=2.3e-31 Score=292.83 Aligned_cols=260 Identities=24% Similarity=0.344 Sum_probs=194.7
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHc---CCCccceEeeEEeccCc-----
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRA---QHPNLVHLQGYCMHKND----- 812 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 812 (1020)
|++.+.||+|+||.||+|+.+ +++.||+|++..... .....+.+|+++++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999976 489999999974432 2234566788877766 59999999999988776
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLA 892 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 892 (1020)
.+++|||+.+ +|.+++.... ...+++..++.++.|++.||+|||+. +++|+||+|+||++++++.+|++|||.+
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999975 7888886542 23589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcc--
Q 035998 893 RLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENR-- 970 (1020)
Q Consensus 893 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 970 (1020)
....... ......++..|+|||+..+..++.++|+||+|+++|||++|..||......+ ..............
T Consensus 155 ~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 155 RIYSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD--QLDKIFDVIGLPSEEE 229 (287)
T ss_pred eeccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH--HHHHHHHHcCCCChHh
Confidence 7763321 1223457889999999998899999999999999999999999987533221 11111111100000
Q ss_pred -cccc------cCccc---cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 971 -ESEV------LDPFI---YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 971 -~~~~------~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.... ..... .....+.....+.+++.+||+.||.+||+++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000 00000 00111223356789999999999999999999985
No 359
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=2.7e-33 Score=328.07 Aligned_cols=251 Identities=31% Similarity=0.435 Sum_probs=201.8
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
+-+++....||.|.||.||.|.. .+|.-.|||.+..... .....+.+|..++..++|||+|++||+-..++..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 44677788999999999999974 5688899998765432 23356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
|||++|+|.+.+... ...++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|||.|+.+..
T Consensus 1314 EyC~~GsLa~ll~~g----ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHG----RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHhccCcHHHHHHhc----chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecC
Confidence 999999999988754 3445556667889999999999999 999999999999999999999999999998865
Q ss_pred CCCc--ccccccccccCccCccccCCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH-hhccc
Q 035998 898 PYDT--HVTTDLVGTLGYIPPEYGQAS---VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR-QENRE 971 (1020)
Q Consensus 898 ~~~~--~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~ 971 (1020)
.... .......||+-|||||++.+. ...-+.||||+|||+.||+||+.||..... .|..+.. ..+..
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------e~aIMy~V~~gh~ 1459 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------EWAIMYHVAAGHK 1459 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------hhHHHhHHhccCC
Confidence 4322 223357899999999998664 356799999999999999999999975432 2333322 22232
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+.++. ....+-.+++..|+..||++|.++.|+++
T Consensus 1460 Pq~P~---------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1460 PQIPE---------RLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CCCch---------hhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 22222 23446789999999999999999998876
No 360
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.98 E-value=4.2e-31 Score=294.85 Aligned_cols=261 Identities=21% Similarity=0.255 Sum_probs=191.5
Q ss_pred cCCeeeccCCeEEEEEEeCCCCEEEEEEecCC--chhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 746 QANIIGCGGFGLVYRATLPDGRNVAIKRLSGD--CGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 746 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
+.+.+|.|+++.||++.. +++.||||++... .....+.+.+|++++++++||||+++++++.+.+..+++|||++++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 344455555555555544 6899999998755 2334567899999999999999999999999999999999999999
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc--
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT-- 901 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-- 901 (1020)
++.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|++|||.+.........
T Consensus 85 ~l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 85 SCEDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 9999988653 23578899999999999999999999 9999999999999999999999999998765432211
Q ss_pred ---ccccccccccCccCccccCC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh--------
Q 035998 902 ---HVTTDLVGTLGYIPPEYGQA--SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE-------- 968 (1020)
Q Consensus 902 ---~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-------- 968 (1020)
.......++..|+|||++.. ..++.++||||+||++|||++|+.||....... ...+........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchh
Confidence 11223456778999998765 358889999999999999999999997533211 111111000000
Q ss_pred ---ccccc----ccCccc----cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 ---NRESE----VLDPFI----YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ---~~~~~----~~d~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..... ..++.. ..........++.+++.+||+.||++|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00000 000000 00112223346889999999999999999999987
No 361
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=2.2e-31 Score=293.13 Aligned_cols=254 Identities=26% Similarity=0.322 Sum_probs=196.8
Q ss_pred CCCcCCeeeccCCeEEEEEEe----CCCCEEEEEEecCCc----hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCce
Q 035998 743 NFDQANIIGCGGFGLVYRATL----PDGRNVAIKRLSGDC----GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 813 (1020)
+|++.+.||+|++|.||+|+. .+++.||||.+.... ....+.+.+|+++++++ +||||+++.+++......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999974 357889999987532 12235678899999999 599999999999988899
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++++|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR----EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhhc----CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 9999999999999888653 3578899999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCcccccccccccCccCccccCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 894 LILSPYDTHVTTDLVGTLGYIPPEYGQASV--ATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 894 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
...... ........|+..|+|||...+.. .+.++||||+|+++|||++|..||........ ............
T Consensus 154 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~-- 228 (288)
T cd05583 154 EFLAEE-EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS--QSEISRRILKSK-- 228 (288)
T ss_pred cccccc-ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch--HHHHHHHHHccC--
Confidence 654322 11222346788999999876654 78899999999999999999999963222111 111111111110
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
+.. +......+.+++.+||+.||++|||++++.+.|+
T Consensus 229 -----~~~----~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 229 -----PPF----PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred -----CCC----CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 000 1111235789999999999999999888876654
No 362
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=1.4e-31 Score=290.84 Aligned_cols=244 Identities=28% Similarity=0.363 Sum_probs=193.3
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 750 IGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
||+|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++.+...+..+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 489999999876533 3445788899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC-----
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD----- 900 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~----- 900 (1020)
.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||++++++.++++|||++........
T Consensus 81 ~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENV----GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 9998764 3689999999999999999999999 999999999999999999999999999876533211
Q ss_pred -cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 901 -THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 901 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
........++..|+|||.......+.++||||+|+++|++++|+.||...... ........ ... .. +
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~~-~~~-~~--~-- 221 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE------EIFQNILN-GKI-EW--P-- 221 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHhc-CCc-CC--C--
Confidence 11223456788999999988888999999999999999999999999744321 11111111 000 00 0
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
........+.+++.+||+.+|.+||++.++.+.
T Consensus 222 ---~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~ 254 (265)
T cd05579 222 ---EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEI 254 (265)
T ss_pred ---ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHH
Confidence 000013467899999999999999999444443
No 363
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=2.3e-31 Score=291.76 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=201.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcC-CCccceEeeEEeccCceEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQ-HPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 816 (1020)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46889999999999999999865 78999999987532 233456888999999998 99999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRKY----GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 9999999999998764 3689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCc------------------ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccH
Q 035998 897 SPYDT------------------HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDL 958 (1020)
Q Consensus 897 ~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~ 958 (1020)
..... .......++..|+|||......++.++||||+|++++++++|+.||.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------ 227 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE------ 227 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH------
Confidence 32211 122234578899999998888899999999999999999999999974431
Q ss_pred HHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCH----HHHHH
Q 035998 959 ISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTT----QQLVS 1014 (1020)
Q Consensus 959 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 1014 (1020)
............ . .+......+.+++.+||+.+|.+||++ +++++
T Consensus 228 ~~~~~~~~~~~~--~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 YLTFQKILKLEY--S---------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHHHhcCC--C---------CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111111111000 0 011113458899999999999999999 77764
No 364
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=2.4e-31 Score=292.08 Aligned_cols=262 Identities=26% Similarity=0.342 Sum_probs=195.3
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHcC-CCccceEeeEEeccCceEEEEEec
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQ-HPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
|++.+.||+|++|.||+|... +++.||||++..... .......+|+..+++++ |||++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999975 578899999875432 22234567899999998 999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
+|++.+++.... +..+++..+..++.|++.||+|||++ +++|+||+|+||++++++.++|+|||.++......
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~- 153 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP- 153 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC-
Confidence 788888877542 34689999999999999999999999 99999999999999999999999999998653321
Q ss_pred cccccccccccCccCccccC-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHH----------HHHHHHHhhc
Q 035998 901 THVTTDLVGTLGYIPPEYGQ-ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLI----------SWVIRMRQEN 969 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~----------~~~~~~~~~~ 969 (1020)
......++..|+|||+.. ...++.++|+||||+++|||++|+.||......+..... .|........
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 154 --PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred --CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 123356788999999764 456789999999999999999999999644321110000 0000000000
Q ss_pred ccccccCccc---cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 RESEVLDPFI---YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 ~~~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......... .....+.....+.+++.+||+.+|++||+++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000000 00001111356889999999999999999999976
No 365
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-32 Score=250.99 Aligned_cols=263 Identities=25% Similarity=0.308 Sum_probs=199.0
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|+..++||+|.||+||+|+.+ +++.||+|...-+. ........+|+-++++++|+|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4566788999999999999854 57889999887543 33456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
|+. +|..|.... .+.++.+.+..++.|+++|+.++|++ .+.|||+||.|.+++.+|+.|++|||+++-++-+.
T Consensus 83 cdq-dlkkyfdsl---ng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSL---NGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHHhc---CCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 965 677766543 35688899999999999999999999 99999999999999999999999999999875442
Q ss_pred CcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc---
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV--- 974 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 974 (1020)
......+-|..|++|.++.+ +-|+...|+||.|||+.|+.. |++-|.+....+....+-|......+..++.+
T Consensus 156 --rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 156 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred --EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 23445677899999998766 468899999999999999998 66666543322211222222222222222221
Q ss_pred cCccccCccC---------HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQH---------DKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.|-..+.-++ +.....-.+++++.+.-+|..|.+++++++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 2211111111 122224578889999999999999999876
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=8.2e-32 Score=302.78 Aligned_cols=265 Identities=27% Similarity=0.341 Sum_probs=201.6
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC-----ceE
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN-----DRL 814 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 814 (1020)
+|++.+.||+|++|.||+|+.. +++.||||++.... ....+.+.+|+++++.++||||+++.+++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999865 58999999987643 334467889999999999999999999988775 789
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
+||||+++ +|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+..
T Consensus 81 lv~e~~~~-~l~~~l~~~----~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELMET-DLHKVIKSP----QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchhh-hHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 99999984 787777643 3789999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCc-ccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc-
Q 035998 895 ILSPYDT-HVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE- 971 (1020)
Q Consensus 895 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~- 971 (1020)
....... .......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+ ..............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~ 229 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID---QLNLIVEVLGTPSEE 229 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHhcCCCChh
Confidence 6443210 122345678899999998877 88999999999999999999999997543211 11111000000000
Q ss_pred ----------cccc------CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHh
Q 035998 972 ----------SEVL------DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS--WLDS 1018 (1020)
Q Consensus 972 ----------~~~~------d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1018 (1020)
.... .+.......+.....+.+++.+||+.+|.+||+++++++ +|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 0000 000000001112346889999999999999999999988 4543
No 367
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=4.3e-31 Score=291.12 Aligned_cols=251 Identities=26% Similarity=0.333 Sum_probs=194.8
Q ss_pred CCCcCCeeeccCCeEEEEEEe----CCCCEEEEEEecCCch----hhHHHHHHHHHHHHHc-CCCccceEeeEEeccCce
Q 035998 743 NFDQANIIGCGGFGLVYRATL----PDGRNVAIKRLSGDCG----QMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 813 (1020)
+|++.+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|+++++++ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 478889999999999999975 3688999999875321 2235678899999999 599999999999988889
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQR----ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 9999999999999998754 4578899999999999999999998 99999999999999999999999999997
Q ss_pred cccCCCCcccccccccccCccCccccCC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 894 LILSPYDTHVTTDLVGTLGYIPPEYGQA--SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 894 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
...... ........|+..|+|||.... ..++.++||||+|+++|+|++|+.||........ .............
T Consensus 154 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~- 229 (290)
T cd05613 154 EFHEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSEP- 229 (290)
T ss_pred eccccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHHHHhhccCC-
Confidence 653221 112223567889999998765 3467899999999999999999999964322211 1111111111100
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
. .+......+.+++.+||+.||++|| ++++++.
T Consensus 230 -~---------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 230 -P---------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -C---------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0 0111223578999999999999997 6677664
No 368
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.2e-31 Score=300.24 Aligned_cols=264 Identities=25% Similarity=0.366 Sum_probs=195.8
Q ss_pred HHHhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEec-cCc
Q 035998 737 ILESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMH-KND 812 (1020)
Q Consensus 737 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 812 (1020)
+...+++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3456788999999999999999999854 78999999886432 2234567889999999999999999999875 457
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLA 892 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 892 (1020)
.++|+||+ +++|..++.. ..+++..+..++.|+++||+|||+. +|+||||+|+||+++.++.++++|||.+
T Consensus 85 ~~lv~e~~-~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred EEEEeehh-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccc
Confidence 88999998 5688877754 2467888899999999999999999 9999999999999999999999999998
Q ss_pred ccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHH---------H
Q 035998 893 RLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISW---------V 962 (1020)
Q Consensus 893 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~---------~ 962 (1020)
+.... ......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||...........+.. .
T Consensus 156 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 156 RIQDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred cccCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 75422 1123456889999998765 5789999999999999999999999965332111000000 0
Q ss_pred HHHHhhcc---ccccc--CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 963 IRMRQENR---ESEVL--DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 963 ~~~~~~~~---~~~~~--d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........ ..... .+.......+.....+.+++.+|++.+|++||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000 00000 000000000112346889999999999999999999986
No 369
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=3.8e-31 Score=292.42 Aligned_cols=250 Identities=25% Similarity=0.455 Sum_probs=191.5
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCC-CCEEEEEEecCCc-hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPD-GRNVAIKRLSGDC-GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
++|++.+.||+|+||.||+|..++ ++.||||.+.... ......+.+|+.++.+. .||||+++++++.+....++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567889999999999999999764 8899999997543 22344566677777666 49999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-cCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-SCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
|+.+ ++..+.... ...+++..+..++.|++.|++|||+ . +|+||||+|+||+++.++.+||+|||++.....
T Consensus 95 ~~~~-~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 95 LMST-CLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred ccCc-CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 9854 676665543 2368899999999999999999997 5 899999999999999999999999999876533
Q ss_pred CCCcccccccccccCccCccccCCCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASV----ATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESE 973 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1020)
.. ......++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...... ........... ...
T Consensus 168 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~-~~~ 238 (296)
T cd06618 168 SK---AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FEVLTKILQEE-PPS 238 (296)
T ss_pred CC---cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HHHHHHHhcCC-CCC
Confidence 21 122335778999999887554 788999999999999999999999642111 11111111111 000
Q ss_pred ccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 974 VLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 974 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
... ......++.+++.+||+.||.+||++.++++
T Consensus 239 ~~~-------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 239 LPP-------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred CCC-------CCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 0012246889999999999999999999976
No 370
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=2.4e-31 Score=299.44 Aligned_cols=262 Identities=23% Similarity=0.241 Sum_probs=194.1
Q ss_pred cCCC-cCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhh--------------HHHHHHHHHHHHHcCCCccceEee
Q 035998 742 NNFD-QANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQM--------------EREFRAEVEALSRAQHPNLVHLQG 805 (1020)
Q Consensus 742 ~~~~-~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 805 (1020)
++|. +.+.||+|+||.||+|... +++.||||++....... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4565 4577999999999999864 68999999986543211 124678999999999999999999
Q ss_pred EEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeE
Q 035998 806 YCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAH 885 (1020)
Q Consensus 806 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 885 (1020)
++...+..++||||++ ++|.+++... ..++++....++.|++.||+|||+. +++||||+|+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK----IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 9999999999999997 5888887643 4588999999999999999999999 999999999999999999999
Q ss_pred EeeccccccccCCC------------CcccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 035998 886 LADFGLARLILSPY------------DTHVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKP 952 (1020)
Q Consensus 886 l~Dfg~~~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~ 952 (1020)
++|||.++....+. .........++..|+|||.+.+. .++.++||||+|+++|||++|+.||....+
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999997664111 01111223467889999987654 478999999999999999999999975432
Q ss_pred CCcccHHHHHHHHHhhcc---ccccc-----C------ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 953 KGSRDLISWVIRMRQENR---ESEVL-----D------PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~---~~~~~-----d------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. +............. ..... . +.............+.+++.+|++.+|++||+++|++.
T Consensus 240 ~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 240 I---DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred H---HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 2 11111111110000 00000 0 00000001112345789999999999999999999986
No 371
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.3e-31 Score=301.99 Aligned_cols=255 Identities=24% Similarity=0.300 Sum_probs=190.1
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC------
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN------ 811 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 811 (1020)
.++|...+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 468999999999999999999864 68999999987532 222356788999999999999999999987543
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..++|+||+.. ++..+.. ..++++.+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 45899999964 6655432 2578899999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc-
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN- 969 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~- 969 (1020)
++..... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .............
T Consensus 164 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~ 235 (342)
T cd07879 164 ARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---DQLTQILKVTGVPG 235 (342)
T ss_pred CcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCC
Confidence 8764221 123467889999998765 56889999999999999999999999753211 1111111000000
Q ss_pred -----------------ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 -----------------RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 -----------------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.......... ....+.....+.+++.+||+.||++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDF-STLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchH-HHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000000 0000112235789999999999999999999985
No 372
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=286.29 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=197.9
Q ss_pred hccCCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCC--chh-----hHHHHHHHHHHHHHcCCCccceEeeEEe-cc
Q 035998 740 STNNFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGD--CGQ-----MEREFRAEVEALSRAQHPNLVHLQGYCM-HK 810 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~ 810 (1020)
..++|-.+.+||+|+|++||+|. ....+.||||+-... ... -.+...+|..+-+.+.||.||++|+||. +.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 34678889999999999999996 456889999986432 211 1234678999999999999999999997 55
Q ss_pred CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc---CCCCeEEe
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD---GNFGAHLA 887 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~ 887 (1020)
+..+-|.|||+|.+|+.|++.. ..+++.+++.|++||+.||.||.+. .++|||-||||.|||+- .-|.+||+
T Consensus 541 dsFCTVLEYceGNDLDFYLKQh----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQH----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred ccceeeeeecCCCchhHHHHhh----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEee
Confidence 6778999999999999999876 5789999999999999999999987 77899999999999984 45889999
Q ss_pred eccccccccCCCCcc-----cccccccccCccCccccC----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccH
Q 035998 888 DFGLARLILSPYDTH-----VTTDLVGTLGYIPPEYGQ----ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDL 958 (1020)
Q Consensus 888 Dfg~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~ 958 (1020)
|||+++.+.+..... .+....||..|.+||.+. ..+.+.|+||||+|||+|+++.|+.||..... ..+.
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs--QQdI 693 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS--QQDI 693 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh--HHHH
Confidence 999999886543332 234468999999999653 34678899999999999999999999974322 1222
Q ss_pred HHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 035998 959 ISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLV 1013 (1020)
Q Consensus 959 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1013 (1020)
.+....+ ....+..... +.-..+...+|++|+++--++|..+.++.
T Consensus 694 LqeNTIl-kAtEVqFP~K--------PvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 694 LQENTIL-KATEVQFPPK--------PVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred Hhhhchh-cceeccCCCC--------CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 2221111 1111111111 11223577899999999999998887764
No 373
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=3.5e-31 Score=294.21 Aligned_cols=245 Identities=29% Similarity=0.419 Sum_probs=192.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCC---chhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGD---CGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
+.|+..+.||+|+||.||+|+.. +++.||+|.+... .....+++.+|+++++.++|+|++++.+++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34677788999999999999864 6788999988642 2233456788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
||+. |++.+++... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++++|||++.....
T Consensus 95 e~~~-~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 95 EYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EccC-CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 9997 5777766533 24578999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCcccccccccccCccCccccC---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQ---ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
.....++..|+|||.+. .+.++.++||||+||++|+|++|+.||...... ......... ....
T Consensus 168 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~-~~~~- 233 (308)
T cd06634 168 ------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQN-ESPA- 233 (308)
T ss_pred ------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH------HHHHHHhhc-CCCC-
Confidence 12346788999999864 456788999999999999999999998643211 111111111 1000
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ........+.+++.+||+.+|++||+++++++
T Consensus 234 ----~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 234 ----L---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred ----c---CcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 0 01122345789999999999999999999986
No 374
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2.5e-31 Score=299.96 Aligned_cols=264 Identities=24% Similarity=0.290 Sum_probs=197.1
Q ss_pred cHHHHHHhccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEec
Q 035998 733 SIDDILESTNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMH 809 (1020)
Q Consensus 733 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 809 (1020)
...++...+++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3456667789999999999999999999975 478899999987542 2224567789999999999999999998864
Q ss_pred c------CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC
Q 035998 810 K------NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG 883 (1020)
Q Consensus 810 ~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 883 (1020)
. ...+++++++ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||++++++.
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 3 3467888876 7788877654 2588999999999999999999999 9999999999999999999
Q ss_pred eEEeeccccccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHH
Q 035998 884 AHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWV 962 (1020)
Q Consensus 884 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~ 962 (1020)
+|++|||+++.... ......++..|+|||...+ ..++.++||||+||++|||++|+.||....... .....
T Consensus 159 ~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~---~~~~~ 230 (345)
T cd07877 159 LKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID---QLKLI 230 (345)
T ss_pred EEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH
Confidence 99999999876422 1223467889999998765 568889999999999999999999996432211 11111
Q ss_pred HHHHh---hccc---------------ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 963 IRMRQ---ENRE---------------SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 963 ~~~~~---~~~~---------------~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..... .... ........ ..........+.+++.+|++.||.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcch-hhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 00000 0000 00000000 0000011235789999999999999999999986
No 375
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=6.7e-31 Score=287.41 Aligned_cols=241 Identities=26% Similarity=0.307 Sum_probs=185.6
Q ss_pred eeeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHH---HHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 749 IIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVE---ALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 749 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
.||+|+||.||+|... +++.||+|.+..... .....+..|.. .++...||+|+++++++.+.+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 588999998865421 11222334443 3444579999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|..++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.....
T Consensus 81 g~~L~~~l~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--- 150 (278)
T cd05606 81 GGDLHYHLSQH----GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--- 150 (278)
T ss_pred CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCcc---
Confidence 99999888643 4689999999999999999999998 9999999999999999999999999998765322
Q ss_pred ccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 902 HVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
......|+..|+|||...++ .++.++||||+|+++|||++|+.||............ ...... .+..
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~~-------~~~~- 218 (278)
T cd05606 151 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID---RMTLTM-------AVEL- 218 (278)
T ss_pred -CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH---HHhhcc-------CCCC-
Confidence 12234688999999998644 6889999999999999999999999754332211111 111000 0000
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRP-----TTQQLVS 1014 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1014 (1020)
+......+.+++.+|+..+|.+|| ++.++++
T Consensus 219 ---~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 ---PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ---CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 001124688999999999999999 9999986
No 376
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=6.2e-31 Score=284.93 Aligned_cols=250 Identities=24% Similarity=0.362 Sum_probs=196.0
Q ss_pred CCCcCCeeeccCCeEEEEEEeCC-CCEEEEEEecCCc-----hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLPD-GRNVAIKRLSGDC-----GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLI 816 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 816 (1020)
+|.+.+.||+|+||.||++.... +..+++|..+... .....++.+|++++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 57888999999999999998643 4445566554321 12234577899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+++++|..++.+.......+++..++.++.|++.|++|||+. +++|+||+|+||+++. +.++++|||.++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999999876555556789999999999999999999998 9999999999999975 569999999987764
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
... .......++..|+|||...+..++.++|+||+|+++|+|++|..||.... .......... .. .
T Consensus 157 ~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~~~~~~-~~-----~ 222 (260)
T cd08222 157 GSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVVLRIVE-GP-----T 222 (260)
T ss_pred CCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHc-CC-----C
Confidence 322 12233567889999999888888999999999999999999999985321 1111111111 11 1
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+. .+......+.+++.+||+.+|++||++.|+++
T Consensus 223 ~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 223 PS----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CC----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 11 11223346889999999999999999999986
No 377
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-32 Score=291.45 Aligned_cols=244 Identities=26% Similarity=0.357 Sum_probs=201.0
Q ss_pred CCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCC
Q 035998 747 ANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
.+++|.|-||+||-|.+ ++|+.||||++.+.. ...+.++++|+++++.+.||.||.+-.-|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 37899999999999986 479999999997654 334578999999999999999999999999999999999999664
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC---CCCeEEeeccccccccCCCC
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG---NFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
-|...+.. ..+.+++.....++.||+.||.|||.+ +|||+||||+|||+.. -.++|+||||+|+.++.
T Consensus 649 MLEMILSs---EkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE--- 719 (888)
T KOG4236|consen 649 MLEMILSS---EKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE--- 719 (888)
T ss_pred HHHHHHHh---hcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch---
Confidence 44444432 346788888899999999999999999 9999999999999953 45799999999999853
Q ss_pred cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcccc
Q 035998 901 THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIY 980 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 980 (1020)
.......+||+.|.|||+++.+.|...-|+||+|||+|--++|..||... .+..++++-+..+..+..+.+
T Consensus 720 ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~e------- 790 (888)
T KOG4236|consen 720 KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSE------- 790 (888)
T ss_pred hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhh-------
Confidence 45566789999999999999999999999999999999999999999742 233455554444444433333
Q ss_pred CccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 981 DKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 981 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.....+++|...++..-++|.+++..+.
T Consensus 791 ------is~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 791 ------ISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred ------cCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 2235789999999999999999988765
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-33 Score=274.15 Aligned_cols=254 Identities=25% Similarity=0.361 Sum_probs=193.9
Q ss_pred CcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch-hhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEecc
Q 035998 745 DQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG-QMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
+....||.|+||+|++-.++ .|+..|||++..... ...+++..|.++..+- +.||||++||.+..++..|+.||.|+
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 33567999999999999865 799999999986653 3446788888876655 79999999999999999999999996
Q ss_pred CCChhhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 822 NGSLDYWLHEK-LDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 822 ~g~L~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
- +++.+.+.. ......+++.-.-+|......||.||-+.. .|||||+||+|||++..|.+|+||||.+..+.+
T Consensus 147 ~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~--- 220 (361)
T KOG1006|consen 147 I-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD--- 220 (361)
T ss_pred h-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH---
Confidence 4 666544322 123356888888889999999999998764 899999999999999999999999999987743
Q ss_pred cccccccccccCccCccccCC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCcc
Q 035998 901 THVTTDLVGTLGYIPPEYGQA--SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPF 978 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 978 (1020)
....+..+|...|||||-+.. ..|+.++||||+|+++||+.||..||.... +..+...+...... +. +.+
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfeql~~Vv~gdp-p~-l~~- 292 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFEQLCQVVIGDP-PI-LLF- 292 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHHHHHHHHcCCC-Ce-ecC-
Confidence 344555678899999997754 358899999999999999999999997432 22222222222111 11 110
Q ss_pred ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 979 IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 979 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.....+....+..++..|+..|-.+||.+.++..
T Consensus 293 --~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 293 --DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred --cccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1111233446889999999999999999999875
No 379
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=1.9e-30 Score=288.86 Aligned_cols=243 Identities=29% Similarity=0.413 Sum_probs=191.2
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 566788999999999999864 68899999986432 22335678899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
+. |++.+++... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||++.....
T Consensus 103 ~~-~~l~~~l~~~---~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 96 4676666543 24688999999999999999999999 999999999999999999999999999864321
Q ss_pred CcccccccccccCccCccccC---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccC
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQ---ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLD 976 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 976 (1020)
.....|+..|+|||++. ...++.++||||+|+++|||++|..||...... . .......... .....
T Consensus 174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~---~---~~~~~~~~~~-~~~~~ 242 (313)
T cd06633 174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---S---ALYHIAQNDS-PTLQS 242 (313)
T ss_pred ----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---H---HHHHHHhcCC-CCCCc
Confidence 22356788999999874 466888999999999999999999998643221 1 1111111111 11010
Q ss_pred ccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 977 PFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 977 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......+.+++.+||+.+|.+||++.++++
T Consensus 243 --------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 243 --------NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred --------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111235789999999999999999999986
No 380
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.9e-31 Score=297.25 Aligned_cols=267 Identities=27% Similarity=0.331 Sum_probs=192.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEeccC------
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHKN------ 811 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 811 (1020)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999865 688999998864322 22345678999999999999999999876543
Q ss_pred --ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeec
Q 035998 812 --DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADF 889 (1020)
Q Consensus 812 --~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 889 (1020)
..++|+||+++ ++...+... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP---SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 35899999975 565555432 34689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCc---------ccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHH
Q 035998 890 GLARLILSPYDT---------HVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLI 959 (1020)
Q Consensus 890 g~~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~ 959 (1020)
|+++........ .......+++.|+|||...+ ..++.++||||+|+++|||++|+.||...........+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999865432211 11123456788999997654 45889999999999999999999999653322111111
Q ss_pred HHHHHHHhhc------ccccccCccccCcc-------CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 960 SWVIRMRQEN------RESEVLDPFIYDKQ-------HDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 960 ~~~~~~~~~~------~~~~~~d~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........+. ......+....... .......+.+++.+|++.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000000 00000000000000 0111246789999999999999999999875
No 381
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=3.5e-31 Score=298.60 Aligned_cols=263 Identities=23% Similarity=0.300 Sum_probs=192.2
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEecc---------
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHK--------- 810 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 810 (1020)
..+|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 468999999999999999999864 6889999998765555556788999999999999999999876543
Q ss_pred -----CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC-CCCe
Q 035998 811 -----NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG-NFGA 884 (1020)
Q Consensus 811 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~ 884 (1020)
...++||||++ ++|.+++.. ..+++..++.++.||+.|++|||+. +|+||||||+||+++. ++.+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceE
Confidence 34689999997 588777753 2578999999999999999999999 9999999999999974 5678
Q ss_pred EEeeccccccccCCCCc-ccccccccccCccCccccC-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHH
Q 035998 885 HLADFGLARLILSPYDT-HVTTDLVGTLGYIPPEYGQ-ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWV 962 (1020)
Q Consensus 885 kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~ 962 (1020)
|++|||.++........ .......++..|+|||.+. +..++.++||||+||++|||++|+.||....+.+........
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 99999999765322111 1112345788999999754 456888999999999999999999999754321110000000
Q ss_pred -------------HHHHhhc--ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 963 -------------IRMRQEN--RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 963 -------------~~~~~~~--~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
....... .......+ .....+....++.+++.+|++.||++||+++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRP--LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCC--HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0000000 00000000 00000112245789999999999999999999985
No 382
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-32 Score=280.75 Aligned_cols=242 Identities=25% Similarity=0.326 Sum_probs=192.2
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchh---hHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQ---MEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 815 (1020)
..+|..+.+||+|+||+|-+|..+ +.+.+|||+++++.-. +.+--..|-+++... +-|.++++..+|+.-+..|.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 356889999999999999999765 4567999999887521 112223455565544 57899999999999999999
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
||||+.||+|...+++. +.+.+..++.+|..||-||-+||++ |||+||||.+|||+|.+|++||+|||+++.-
T Consensus 428 VMEyvnGGDLMyhiQQ~----GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQV----GKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred EEEEecCchhhhHHHHh----cccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccc
Confidence 99999999998888876 5677788999999999999999999 9999999999999999999999999999864
Q ss_pred cCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
.- ....+...+|||.|+|||++..++|+..+|+||+||++|||+.|++||++....+. .+. +... ..
T Consensus 501 i~--~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el---F~a---I~eh----nv- 567 (683)
T KOG0696|consen 501 IF--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL---FQA---IMEH----NV- 567 (683)
T ss_pred cc--CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHH---HHHc----cC-
Confidence 32 23445668999999999999999999999999999999999999999986433221 111 1110 01
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCC
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT 1008 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1008 (1020)
.++.....+..++....+...|.+|..
T Consensus 568 ------syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 568 ------SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ------cCcccccHHHHHHHHHHhhcCCccccC
Confidence 122233345677888888999998863
No 383
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.6e-30 Score=293.28 Aligned_cols=258 Identities=23% Similarity=0.309 Sum_probs=193.6
Q ss_pred hccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC-----
Q 035998 740 STNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN----- 811 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 811 (1020)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 467899999999999999999975 478999999986432 223456789999999999999999999987553
Q ss_pred -ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 812 -DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 812 -~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
..++||||+ +++|..++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999999 6788887753 3588999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHH------
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVI------ 963 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~------ 963 (1020)
+++..... .....+++.|+|||.+.+ ..++.++|+||+|+++|+|++|+.||....... .......
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~ 236 (343)
T cd07880 164 LARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD--QLMEIMKVTGTPS 236 (343)
T ss_pred cccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCC
Confidence 99865321 123456889999998765 468899999999999999999999997432210 0000000
Q ss_pred -----HHHhh------cccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 964 -----RMRQE------NRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 964 -----~~~~~------~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..... ........+.+ ..........+.+++.+|++.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 237 KEFVQKLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHHhhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 00000000000 0000112235789999999999999999999985
No 384
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=252.93 Aligned_cols=222 Identities=24% Similarity=0.430 Sum_probs=180.0
Q ss_pred hhhccceEEEecCCCccccHHHHHHhccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCch-hhHHHHHHHHHHH
Q 035998 715 EELGSKLVVLFHNKEKEISIDDILESTNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCG-QMEREFRAEVEAL 792 (1020)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l 792 (1020)
+.+.++.........-+++.+++ ..+..||+|++|.|-+.++ .+|+..|+|.+..... +..+...+|+.+.
T Consensus 26 ~~Ld~~a~i~I~~~~~eV~ad~L-------~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~ 98 (282)
T KOG0984|consen 26 RNLDSRALIYIGDRNFEVPADDL-------VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDII 98 (282)
T ss_pred cccCCCceEEEecCccccchhhh-------hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhh
Confidence 33333433333333344555554 4456799999999988875 4799999999876543 3345667777765
Q ss_pred HH-cCCCccceEeeEEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCC
Q 035998 793 SR-AQHPNLVHLQGYCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDI 871 (1020)
Q Consensus 793 ~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 871 (1020)
.+ ..+|.+|.+||...+....++.||.|+. +|+.+-++....+..+++...-+|+..|.+||.|||++. .+||||+
T Consensus 99 ~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDv 175 (282)
T KOG0984|consen 99 MRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDV 175 (282)
T ss_pred ccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccC
Confidence 44 4799999999999999999999999965 899988888888889999999999999999999999985 8999999
Q ss_pred CCCCEEEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCC----CCCCchhhHHHHHHHHHHHHcCCCCC
Q 035998 872 KSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQA----SVATYKGDVYSFGVVLLELLTGKRPM 947 (1020)
Q Consensus 872 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGvil~elltg~~pf 947 (1020)
||+|||++.+|++|+||||.+-.+.+. -..+...|...|||||.+.. ..|+-|+||||+|+.+.||.+++.||
T Consensus 176 KPsNiLIn~~GqVKiCDFGIsG~L~dS---iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY 252 (282)
T KOG0984|consen 176 KPSNILINYDGQVKICDFGISGYLVDS---IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPY 252 (282)
T ss_pred CcceEEEccCCcEEEcccccceeehhh---hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccc
Confidence 999999999999999999999887543 33344678889999997643 47899999999999999999999999
Q ss_pred CC
Q 035998 948 DM 949 (1020)
Q Consensus 948 ~~ 949 (1020)
+.
T Consensus 253 ~~ 254 (282)
T KOG0984|consen 253 ES 254 (282)
T ss_pred cc
Confidence 74
No 385
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=4.5e-31 Score=296.64 Aligned_cols=260 Identities=23% Similarity=0.297 Sum_probs=190.6
Q ss_pred CCCcCCeeeccCCeEEEEEEeC-C--CCEEEEEEecCCc--hhhHHHHHHHHHHHHHc-CCCccceEeeEEecc----Cc
Q 035998 743 NFDQANIIGCGGFGLVYRATLP-D--GRNVAIKRLSGDC--GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHK----ND 812 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 812 (1020)
+|++.+.||+|+||.||+|+.. + +..||+|++.... ....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4788899999999999999865 3 7789999986532 22345678899999999 599999999875432 45
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLA 892 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 892 (1020)
.++++||+. ++|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG----QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 678899886 5888877543 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCc--ccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH----
Q 035998 893 RLILSPYDT--HVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM---- 965 (1020)
Q Consensus 893 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~---- 965 (1020)
+........ .......|+..|+|||+..+ ..++.++||||+|+++|+|++|+.||...... .........
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~ 229 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV---DQLNQILQVLGTP 229 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH---HHHHHHHHHhCCC
Confidence 865432211 11233568899999997655 56899999999999999999999999753311 111100000
Q ss_pred --------Hhhc------ccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 966 --------RQEN------RESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 966 --------~~~~------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.... ........ ......+.....+.+++.+|++.||++|||+++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKK-PFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCc-chHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 00000000 000000111346889999999999999999999976
No 386
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=9.1e-31 Score=287.33 Aligned_cols=259 Identities=27% Similarity=0.366 Sum_probs=197.5
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
|+..+.||+|.+|.||+|... +++.||+|.+.... ....+.+.+|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999875 58999999988653 233456788999999999999999999999999999999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCC
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYD 900 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 900 (1020)
+ ++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||.++.......
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 58999887642 4689999999999999999999999 999999999999999999999999999987643221
Q ss_pred cccccccccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc---------c
Q 035998 901 THVTTDLVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN---------R 970 (1020)
Q Consensus 901 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~---------~ 970 (1020)
......++..|+|||...+. .++.++||||+|+++|||++|+.||...... +............ .
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 154 --TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI---DQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred --ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH---HHHHHHHHHhCCCcHHHHHhhcc
Confidence 12234457789999988766 8899999999999999999999999643321 1111111100000 0
Q ss_pred c---ccccCcc---ccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 971 E---SEVLDPF---IYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 971 ~---~~~~d~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ....... ......+.....+.+++.+||+.||++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 0000000 000001112346899999999999999999999985
No 387
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=294.81 Aligned_cols=239 Identities=23% Similarity=0.311 Sum_probs=190.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
+..|+....+|.|+|+.|-.+.. .+++..+||++.+... +-.+|+.++... +||||+++.+++.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 45677888899999999998875 4688899999987632 334567666555 79999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEE-cCCCCeEEeeccccccccC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILL-DGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~Dfg~~~~~~~ 897 (1020)
++.|+-+.+.+... +... ..+.+|+.+|+.|+.|||++ ||||||+||+|||+ ++.++++|+|||.++...+
T Consensus 397 ~l~g~ell~ri~~~----~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 397 LLDGGELLRRIRSK----PEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred hccccHHHHHHHhc----chhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 99998776665543 2223 67889999999999999999 99999999999999 5899999999999987643
Q ss_pred CCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCc
Q 035998 898 PYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDP 977 (1020)
Q Consensus 898 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 977 (1020)
. ....+-|..|.|||++....|++++||||+|+++|+|++|+.||.....+ ++...++... ...
T Consensus 469 ~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-----~ei~~~i~~~-~~s----- 532 (612)
T KOG0603|consen 469 S-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-----IEIHTRIQMP-KFS----- 532 (612)
T ss_pred h-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-----HHHHHhhcCC-ccc-----
Confidence 2 22335578999999999999999999999999999999999999755443 2222222211 111
Q ss_pred cccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 978 FIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 978 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
........+|+.+|++.||.+||++.++..
T Consensus 533 -------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 -------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred -------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 112235789999999999999999999865
No 388
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=2.5e-31 Score=299.85 Aligned_cols=257 Identities=25% Similarity=0.324 Sum_probs=194.8
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCc----
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKND---- 812 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 812 (1020)
..++|++.+.||+|++|.||+|+.. +++.||||++.... ....+.+.+|++++++++|||++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4578999999999999999999875 57899999986532 2233567789999999999999999988766554
Q ss_pred --eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 813 --RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 813 --~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
.++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 5688888764 3589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhc
Q 035998 891 LARLILSPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQEN 969 (1020)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 969 (1020)
++...... .....++..|+|||...+ ..++.++||||+|+++|||++|+.||...... .............
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~---~~~~~i~~~~~~~ 235 (343)
T cd07851 164 LARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI---DQLKRIMNLVGTP 235 (343)
T ss_pred cccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhcCCC
Confidence 99865322 233467889999998755 46789999999999999999999999643221 1111111100000
Q ss_pred c------------------cccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 970 R------------------ESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 970 ~------------------~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
. ......+.. ..........+.+++.+|++.+|++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 236 DEELLQKISSESARNYIQSLPQMPKKDF-KEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CHHHHhhccchhHHHHHHhccccCCCCH-HHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0 000000000 0000112346889999999999999999999986
No 389
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=296.17 Aligned_cols=262 Identities=26% Similarity=0.414 Sum_probs=215.3
Q ss_pred cccHHHHHHhccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEe
Q 035998 731 EISIDDILESTNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCM 808 (1020)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 808 (1020)
.+.++.+...++.|++.+.||+|.+|.||+++. ++++.+|+|+...+... .++++.|.++++.. .|||++.+++++.
T Consensus 8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred ccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 345666667788899999999999999999984 47888999998776443 45788899999888 6999999999987
Q ss_pred c-----cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC
Q 035998 809 H-----KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG 883 (1020)
Q Consensus 809 ~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 883 (1020)
. +++.|+|||||.+|+..++++... +..+.|+.+..|++.++.|++|||.. .++|||||-.|||++.++.
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCc
Confidence 4 578899999999999999998765 67899999999999999999999999 9999999999999999999
Q ss_pred eEEeeccccccccCCCCcccccccccccCccCccccCCC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccH
Q 035998 884 AHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQAS-----VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDL 958 (1020)
Q Consensus 884 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~ 958 (1020)
||++|||++..... ........+||+.|||||++... .|+..+|+||+|++..||.-|.+|+.++.+...
T Consensus 162 VKLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra--- 236 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA--- 236 (953)
T ss_pred EEEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh---
Confidence 99999999988743 23445667999999999987543 467799999999999999999999976544211
Q ss_pred HHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 959 ISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 959 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
...+ ...|...-..+....+++.++|..|+..|-++||++.++++
T Consensus 237 ---------LF~I--pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 ---------LFLI--PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ---------hccC--CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 0111 11222222334455678999999999999999999999875
No 390
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.5e-30 Score=313.72 Aligned_cols=145 Identities=28% Similarity=0.428 Sum_probs=130.8
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
++|++.++||+|+||.||+|... +++.||||++.... ......+.+|+++++.++||||+++++++......|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57899999999999999999875 68999999987542 223467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 818 SFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 818 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
||+.+++|.+++... ..+++..++.++.||+.||+|||.. +||||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~----~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY----GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999998754 3578899999999999999999998 99999999999999999999999999986
No 391
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=277.37 Aligned_cols=259 Identities=23% Similarity=0.312 Sum_probs=200.9
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcC--CC----ccceEeeEEeccCce
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQ--HP----NLVHLQGYCMHKNDR 813 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~----niv~l~~~~~~~~~~ 813 (1020)
+++|.+...+|+|.||.|-.+... .+..||||+++... ...+...-|+++++++. .| -+|.+.+||...++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 678999999999999999998654 47889999987542 22345667999999993 23 378899999999999
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc--------------
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD-------------- 879 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-------------- 879 (1020)
++|+|.+ |-++.+++... +-.+++..++..|+.|+++++++||+. +++|-||||+||++.
T Consensus 167 Civfell-G~S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred EEEEecc-ChhHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCcc
Confidence 9999988 56889999864 446789999999999999999999999 999999999999982
Q ss_pred ------CCCCeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 035998 880 ------GNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPK 953 (1020)
Q Consensus 880 ------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~ 953 (1020)
.+..+|++|||.|++.. ......+.|..|+|||++.+-.++.++||||+|||++|+.||..-|+.....
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~-----e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDH-----EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred ceeccCCCcceEEEecCCcceec-----cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 13458999999998642 2235567899999999999999999999999999999999999999865544
Q ss_pred CcccHHHHHHHHHhhccccc-------------ccC------------------c-cccCccCHHHHHHHHHHHhhccCC
Q 035998 954 GSRDLISWVIRMRQENRESE-------------VLD------------------P-FIYDKQHDKEMLRVLDIACLCLSE 1001 (1020)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~-------------~~d------------------~-~~~~~~~~~~~~~l~~li~~cl~~ 1001 (1020)
+....++.+. .+.+..- .+| | .........+..++.+|+++|+.+
T Consensus 316 EHLaMMerIl---Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 316 EHLAMMERIL---GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred HHHHHHHHhh---CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 3322222221 1100000 000 0 001122345666799999999999
Q ss_pred CCCCCCCHHHHHH
Q 035998 1002 SPKVRPTTQQLVS 1014 (1020)
Q Consensus 1002 dP~~RPs~~evl~ 1014 (1020)
||.+|+|+.|+++
T Consensus 393 DP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 393 DPARRITLREALS 405 (415)
T ss_pred CccccccHHHHhc
Confidence 9999999999986
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=9.3e-31 Score=284.07 Aligned_cols=220 Identities=26% Similarity=0.321 Sum_probs=182.3
Q ss_pred ccccHHHHHHhc---cCCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCCch---hhHHHHHHHHHHHHHcCCCccce
Q 035998 730 KEISIDDILEST---NNFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGDCG---QMEREFRAEVEALSRAQHPNLVH 802 (1020)
Q Consensus 730 ~~~~~~~~~~~~---~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~ 802 (1020)
|+..+--+..+. .-|..++.||-|+||+|.+++ .++...||+|.+.+..- .....+.+|..++.+...+.||+
T Consensus 614 KESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVr 693 (1034)
T KOG0608|consen 614 KESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVR 693 (1034)
T ss_pred hhhhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEE
Confidence 333444444443 347778999999999999997 44567799999876542 22345678999999999999999
Q ss_pred EeeEEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC
Q 035998 803 LQGYCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF 882 (1020)
Q Consensus 803 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 882 (1020)
+|-.|++++..|+||+|++|||+..+|.+. +.+.++-++.++..+..|+++.|+. |+|||||||+|||||.+|
T Consensus 694 LyySFQDkdnLYFVMdYIPGGDmMSLLIrm----gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdG 766 (1034)
T KOG0608|consen 694 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRM----GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDG 766 (1034)
T ss_pred EEEEeccCCceEEEEeccCCccHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCC
Confidence 999999999999999999999999999876 6788889999999999999999999 999999999999999999
Q ss_pred CeEEeeccccccccCC--------CCc--------------------------------ccccccccccCccCccccCCC
Q 035998 883 GAHLADFGLARLILSP--------YDT--------------------------------HVTTDLVGTLGYIPPEYGQAS 922 (1020)
Q Consensus 883 ~~kl~Dfg~~~~~~~~--------~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~ 922 (1020)
++||+|||+|.-+.-. .+. ......+||+.|+|||++...
T Consensus 767 HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~ 846 (1034)
T KOG0608|consen 767 HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLART 846 (1034)
T ss_pred ceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhccc
Confidence 9999999998543210 000 000124899999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcc
Q 035998 923 VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSR 956 (1020)
Q Consensus 923 ~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~ 956 (1020)
.|+..+|+||.|||+|||+.|+.||....+.+..
T Consensus 847 g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq 880 (1034)
T KOG0608|consen 847 GYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQ 880 (1034)
T ss_pred CccccchhhHhhHHHHHHhhCCCCccCCCCCcce
Confidence 9999999999999999999999999887776654
No 393
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=6.9e-30 Score=274.99 Aligned_cols=236 Identities=27% Similarity=0.306 Sum_probs=190.7
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEecCCch---hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCCh
Q 035998 750 IGCGGFGLVYRATLP-DGRNVAIKRLSGDCG---QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
||+|+||.||++... +++.||+|.+..... .....+..|++++++++|||++++++++......++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999865 588999999875432 2345788999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccc
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTT 905 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 905 (1020)
.+++... ..+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++++|||.+....... ....
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~ 151 (250)
T cd05123 81 FSHLSKE----GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTN 151 (250)
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC--Cccc
Confidence 9998764 3588999999999999999999998 99999999999999999999999999997753321 1233
Q ss_pred ccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 906 DLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 906 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
...++..|+|||...+...+.++|+||+|+++|++++|+.||..... ........... .. .+.
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~~~----~~-------~~~ 214 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR------KEIYEKILKDP----LR-------FPE 214 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhcCC----CC-------CCC
Confidence 45678899999999888899999999999999999999999964322 11111111110 00 001
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHH
Q 035998 986 KEMLRVLDIACLCLSESPKVRPTTQQ 1011 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RPs~~e 1011 (1020)
.....+.+++.+||..||++||++++
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 11245789999999999999999943
No 394
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.2e-32 Score=265.11 Aligned_cols=266 Identities=26% Similarity=0.357 Sum_probs=195.1
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCC--chhhHHHHHHHHHHHHHcCCCccceEeeEEecc--------
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGD--CGQMEREFRAEVEALSRAQHPNLVHLQGYCMHK-------- 810 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 810 (1020)
..|+...+||+|.||+||+|+.+ +|+.||+|+.--+ ...-.....+|+.++..++|+|++.+++.|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34666788999999999999865 5777898865321 112234567899999999999999999888632
Q ss_pred CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecc
Q 035998 811 NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFG 890 (1020)
Q Consensus 811 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 890 (1020)
...|+||.+|+. +|.-.+... ...++..++.+++.++..||.|+|+. .|+|||+||.|+||+.+|.+|++|||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~---~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNR---KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCc---cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 347899999986 565555433 35688899999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCc--ccccccccccCccCccccC-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHh
Q 035998 891 LARLILSPYDT--HVTTDLVGTLGYIPPEYGQ-ASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQ 967 (1020)
Q Consensus 891 ~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 967 (1020)
+++.+..+... ...+..+.|..|.+||.+. .+.|+++.|||..|||+.||+||.+-|++.........++.......
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 99876543322 2233456689999999765 46799999999999999999999999986555444444443332222
Q ss_pred hcccccccC----------ccccCcc--CHHHHH------HHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 968 ENRESEVLD----------PFIYDKQ--HDKEML------RVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 968 ~~~~~~~~d----------~~~~~~~--~~~~~~------~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+.++.... |...... -++... +..+++..++..||.+|+++++++.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 222222111 0000000 011111 5678999999999999999999875
No 395
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=262.17 Aligned_cols=246 Identities=23% Similarity=0.380 Sum_probs=196.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 815 (1020)
-.+|+.+++||+|+|++|..++++ +.+.+|+|+++++. .+...-.+.|-.++.+. +||.+|.+..+|+.+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467999999999999999999865 57789999987653 22223456677777666 79999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLI 895 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 895 (1020)
|.||++||+|..++++. ..++++.++.+...|.-||.|||++ |||+||+|.+||++|.+|++|++|+|+++.-
T Consensus 329 vieyv~ggdlmfhmqrq----rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEecCcceeeehhhh----hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 99999999998777765 5689999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC----CCcccHHHHHHHHHhhccc
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKP----KGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~----~~~~~~~~~~~~~~~~~~~ 971 (1020)
..+. ..+...+|||.|+|||++++..|.+.+|+|++||+|+||+.|+.||+.... ...+++.-.+.- +..
T Consensus 402 l~~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvil---ekq- 475 (593)
T KOG0695|consen 402 LGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVIL---EKQ- 475 (593)
T ss_pred CCCC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHh---hhc-
Confidence 4443 345678999999999999999999999999999999999999999974332 223333322221 111
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT 1008 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1008 (1020)
+.-|+. ...+...+++.-+..||.+|..
T Consensus 476 --iriprs-------lsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 476 --IRIPRS-------LSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred --ccccce-------eehhhHHHHHHhhcCCcHHhcC
Confidence 111111 1123556778889999999863
No 396
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=283.25 Aligned_cols=240 Identities=23% Similarity=0.290 Sum_probs=199.0
Q ss_pred CCcCCeeeccCCeEEEEEEeCCCC-EEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 744 FDQANIIGCGGFGLVYRATLPDGR-NVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~~~~-~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
++.+.-||-|+||.|-++..+... .+|+|.+++.. ...++.+..|..+|...+.|.||++|-.|.+.+..|++||-
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence 455667999999999999876433 38888776542 23345678899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
|-||.+...++.+ +.++..++..++..+.+|++|||++ +||+|||||+|.++|.+|-+|+.|||+|+.++.
T Consensus 502 ClGGElWTiLrdR----g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~-- 572 (732)
T KOG0614|consen 502 CLGGELWTILRDR----GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS-- 572 (732)
T ss_pred hcCchhhhhhhhc----CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc--
Confidence 9999999999876 6788889999999999999999999 999999999999999999999999999999854
Q ss_pred CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 900 DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 900 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
...+...+|||.|+|||++.++..+.++|.||+|+++||+++|.+||.+..+-.....+-....+.
T Consensus 573 -g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i------------- 638 (732)
T KOG0614|consen 573 -GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI------------- 638 (732)
T ss_pred -CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-------------
Confidence 455677899999999999999999999999999999999999999998665543333322221111
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCC
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPT 1008 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1008 (1020)
..+........+++++..+.+|.+|..
T Consensus 639 --~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 639 --EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred --hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 111223345788999999999999985
No 397
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1e-29 Score=271.07 Aligned_cols=219 Identities=22% Similarity=0.225 Sum_probs=175.0
Q ss_pred cCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCChhhhhhh
Q 035998 753 GGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSLDYWLHE 831 (1020)
Q Consensus 753 G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 831 (1020)
|.+|.||+++.. +++.||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999864 68899999987642 233455555566799999999999999999999999999999999876
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccccccccc
Q 035998 832 KLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTL 911 (1020)
Q Consensus 832 ~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~ 911 (1020)
. ..+++..+..++.|+++||+|+|+. +|+||||||+||+++.++.++++|||.+...... .....++.
T Consensus 79 ~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~ 146 (237)
T cd05576 79 F----LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVEN 146 (237)
T ss_pred h----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCc
Confidence 4 3589999999999999999999998 9999999999999999999999999988665321 12234567
Q ss_pred CccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHH
Q 035998 912 GYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRV 991 (1020)
Q Consensus 912 ~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 991 (1020)
.|+|||...+..++.++||||+|+++|||++|+.|+........ .. ... ..+......+
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~------------~~--~~~-------~~~~~~~~~~ 205 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN------------TH--TTL-------NIPEWVSEEA 205 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc------------cc--ccc-------CCcccCCHHH
Confidence 89999999888899999999999999999999988753211100 00 000 0011122357
Q ss_pred HHHHhhccCCCCCCCCCH
Q 035998 992 LDIACLCLSESPKVRPTT 1009 (1020)
Q Consensus 992 ~~li~~cl~~dP~~RPs~ 1009 (1020)
.+++.+|++.||++||++
T Consensus 206 ~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 206 RSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHccCCHHHhcCC
Confidence 899999999999999996
No 398
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2.9e-28 Score=279.83 Aligned_cols=261 Identities=23% Similarity=0.326 Sum_probs=180.7
Q ss_pred hccCCCcCCeeeccCCeEEEEEEe-----------------CCCCEEEEEEecCCchhhHHH--------------HHHH
Q 035998 740 STNNFDQANIIGCGGFGLVYRATL-----------------PDGRNVAIKRLSGDCGQMERE--------------FRAE 788 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 788 (1020)
..++|++.++||+|+||.||+|.. .+++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999963 235689999987543322222 3346
Q ss_pred HHHHHHcCCCcc-----ceEeeEEec--------cCceEEEEEeccCCChhhhhhhcCC--------------------C
Q 035998 789 VEALSRAQHPNL-----VHLQGYCMH--------KNDRLLIYSFMENGSLDYWLHEKLD--------------------G 835 (1020)
Q Consensus 789 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~ 835 (1020)
+.++.+++|.++ ++++++|.. ....++||||+++++|.++++.... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766654 677777653 3567999999999999998874311 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcccccccccccCccC
Q 035998 836 PSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIP 915 (1020)
Q Consensus 836 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a 915 (1020)
...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++...... ........+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCC-ccCccccCCCcceeC
Confidence 12356788899999999999999999 99999999999999999999999999997653221 111122345789999
Q ss_pred ccccCCCCC----------------------CchhhHHHHHHHHHHHHcCCC-CCCCCCCCCc------ccHHHHHHHHH
Q 035998 916 PEYGQASVA----------------------TYKGDVYSFGVVLLELLTGKR-PMDMCKPKGS------RDLISWVIRMR 966 (1020)
Q Consensus 916 PE~~~~~~~----------------------~~~~DvwSlGvil~elltg~~-pf~~~~~~~~------~~~~~~~~~~~ 966 (1020)
||.+..... ..+.||||+||++|||++|.. ||........ .+...|...
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~-- 456 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY-- 456 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh--
Confidence 997653221 134799999999999999875 7653221111 011111110
Q ss_pred hhcccccccCccccCccCHHHHHHHHHHHhhccCCCC---CCCCCHHHHHH
Q 035998 967 QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESP---KVRPTTQQLVS 1014 (1020)
Q Consensus 967 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 1014 (1020)
.... .+-.. .........+++.+|+..+| .+|+|++|+++
T Consensus 457 ~~~~----~~~~~----~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 457 KGQK----YDFSL----LDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cccC----CCccc----ccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0000 00000 11122457889999999766 68999999986
No 399
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=3.4e-28 Score=260.11 Aligned_cols=238 Identities=31% Similarity=0.399 Sum_probs=192.1
Q ss_pred CCeEEEEEEeC-CCCEEEEEEecCCchhh-HHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCChhhhhhh
Q 035998 754 GFGLVYRATLP-DGRNVAIKRLSGDCGQM-EREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSLDYWLHE 831 (1020)
Q Consensus 754 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 831 (1020)
+||.||+|... +++.||+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48999999997665433 57899999999999999999999999998999999999999999999876
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccccccccccc
Q 035998 832 KLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTL 911 (1020)
Q Consensus 832 ~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~ 911 (1020)
. ..+++..++.++.+++.+++|||+. +++|+||+|+||+++.++.++++|||.+....... ......++.
T Consensus 81 ~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~ 150 (244)
T smart00220 81 R----GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTP 150 (244)
T ss_pred c----cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCc
Confidence 4 2378999999999999999999999 99999999999999999999999999998764321 233456788
Q ss_pred CccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHH
Q 035998 912 GYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRV 991 (1020)
Q Consensus 912 ~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 991 (1020)
.|+|||...+..++.++||||+|+++|+|++|..||..... ..... ........... . .......++
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~---~~~~~~~~~~~--~------~~~~~~~~~ 217 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELF---KKIGKPKPPFP--P------PEWKISPEA 217 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHH---HHHhccCCCCc--c------ccccCCHHH
Confidence 99999999888899999999999999999999999964311 11111 11111110000 0 000022468
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 035998 992 LDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 992 ~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+++.+|+..+|++||++.++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhh
Confidence 89999999999999999999986
No 400
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=286.42 Aligned_cols=247 Identities=25% Similarity=0.378 Sum_probs=187.8
Q ss_pred CCcCCeeeccCCeE-EEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEecc
Q 035998 744 FDQANIIGCGGFGL-VYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
|...+.+|.|+.|+ ||+|.+ +|+.||||++-... ..-+.+|++.++.- +|||||++++.-.++...||+.|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 34446789999996 699998 58999999986442 34567899999888 69999999998888889999999996
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC---C--CCeEEeecccccccc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG---N--FGAHLADFGLARLIL 896 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~--~~~kl~Dfg~~~~~~ 896 (1020)
. +|++++...............+.++.|+++|++|||+. +||||||||.||||+. + .+++|+|||+++.+.
T Consensus 587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 5 89999886311111112145678999999999999998 9999999999999965 3 468999999999986
Q ss_pred CCCCc-ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccc
Q 035998 897 SPYDT-HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEV 974 (1020)
Q Consensus 897 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1020)
..... .......||-+|+|||++.....+.++||||+||++|+.++ |.+||...-..+ ..+......-..
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--------~NIl~~~~~L~~ 734 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--------ANILTGNYTLVH 734 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--------hhhhcCccceee
Confidence 44322 23455789999999999999988999999999999999999 599997432211 111111111111
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+.+ ..++ +..+||.+|+++||..||++.+|+.
T Consensus 735 L~~------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 LEP------LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ecc------CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 111 1111 5789999999999999999999975
No 401
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=1.4e-28 Score=290.73 Aligned_cols=260 Identities=17% Similarity=0.218 Sum_probs=167.6
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-C----CCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeE------Ee
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-D----GRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGY------CM 808 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 808 (1020)
..++|++.+.||+|+||.||+|+.. + +..||||++...... +....| .++...+.+++.+... ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4578999999999999999999875 4 689999987643211 111111 1111222222222211 23
Q ss_pred ccCceEEEEEeccCCChhhhhhhcCC----------------CCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCC
Q 035998 809 HKNDRLLIYSFMENGSLDYWLHEKLD----------------GPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIK 872 (1020)
Q Consensus 809 ~~~~~~lv~e~~~~g~L~~~l~~~~~----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 872 (1020)
.....++||||+++++|.+++..... .........+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 55678999999999999998865310 001112344668999999999999999 99999999
Q ss_pred CCCEEEcC-CCCeEEeeccccccccCCCCcccccccccccCccCccccCCC----------------------CCCchhh
Q 035998 873 SSNILLDG-NFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQAS----------------------VATYKGD 929 (1020)
Q Consensus 873 p~NIll~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~D 929 (1020)
|+|||++. ++.+||+|||+++...... ........+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999986 5789999999998653321 2233456789999999954322 2345679
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcc----cccccCccc----cC--ccCHHHHHHHHHHHhhcc
Q 035998 930 VYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENR----ESEVLDPFI----YD--KQHDKEMLRVLDIACLCL 999 (1020)
Q Consensus 930 vwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~~----~~--~~~~~~~~~l~~li~~cl 999 (1020)
|||+||++|||+++..|++. +............. ......+.. .. ...........+|+.+|+
T Consensus 362 VwSlGviL~el~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDS-------NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cHHHHHHHHHHHhCcCCCch-------HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 99999999999997766532 11111111110000 000000000 00 000001123568999999
Q ss_pred CCCCCCCCCHHHHHH
Q 035998 1000 SESPKVRPTTQQLVS 1014 (1020)
Q Consensus 1000 ~~dP~~RPs~~evl~ 1014 (1020)
+.||++|||++|+++
T Consensus 435 ~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 435 RFKGRQRISAKAALA 449 (566)
T ss_pred cCCcccCCCHHHHhC
Confidence 999999999999987
No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-29 Score=249.80 Aligned_cols=261 Identities=27% Similarity=0.366 Sum_probs=191.5
Q ss_pred CcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCch--hhHHHHHHHHHHHHHcCCCccceEeeEEecc-----CceEEE
Q 035998 745 DQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCG--QMEREFRAEVEALSRAQHPNLVHLQGYCMHK-----NDRLLI 816 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~lv 816 (1020)
+..+.||-|+||.||.++. ++|+.||.|++..... ...+.+.+|++++..++|.|+...++..+-. .+.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 4457899999999999986 4899999999864322 2345678899999999999999888776532 345778
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
+|.|.. + +++.+-++..++.+.+.-++.||++||.|||+. +|.||||||.|.+++.+..+||||||+++...
T Consensus 136 TELmQS-D----LHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 136 TELMQS-D----LHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHh-h----hhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 888754 4 444555678899999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCcccccccccccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHH------H--h
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRM------R--Q 967 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~------~--~ 967 (1020)
. ++...++..+-|..|+|||++.+ +.|+.++||||+|||+.|++..+.-|....+-+..+.+...... + -
T Consensus 208 ~-d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 208 Q-RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred h-hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 3 33444455677889999998876 47899999999999999999999888765543322222211100 0 0
Q ss_pred hccccccc-----C---ccccC-ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 968 ENRESEVL-----D---PFIYD-KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 968 ~~~~~~~~-----d---~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
++-...++ . +.++. ........+...+...++..||.+|.+..+.+.
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~ 342 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQ 342 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence 00000000 0 11111 111222334667888999999999999998875
No 403
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=3.3e-28 Score=234.01 Aligned_cols=257 Identities=19% Similarity=0.299 Sum_probs=191.4
Q ss_pred ccCCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcC-CCccceEeeEEecc--CceEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQ-HPNLVHLQGYCMHK--NDRLLI 816 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 816 (1020)
.++|++.+++|+|.+++||.|. ..+.+.++||++++. ..+.+.+|+.+++.+. ||||++++++..+. ....+|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4678999999999999999997 457889999999753 3567899999999996 99999999998765 445799
Q ss_pred EEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC-CCeEEeeccccccc
Q 035998 817 YSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN-FGAHLADFGLARLI 895 (1020)
Q Consensus 817 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~~~ 895 (1020)
+||+++.+...... .++...+...+.+++.||.|+|+. ||+|||+||.|+++|.. ..++++|+|+|.++
T Consensus 114 FE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred hhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhc
Confidence 99999988765433 467778899999999999999999 99999999999999864 56999999999887
Q ss_pred cCCCCcccccccccccCccCcccc-CCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhh------
Q 035998 896 LSPYDTHVTTDLVGTLGYIPPEYG-QASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQE------ 968 (1020)
Q Consensus 896 ~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~------ 968 (1020)
....+ ....+.+..|--||.+ .-+.|+..-|+|||||+++.|+..+.||-...+.. ..++..+.-....
T Consensus 184 Hp~~e---YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~-DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 184 HPGKE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred CCCce---eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH-HHHHHHHHHhChHHHHHHH
Confidence 43322 2234556678899976 45778999999999999999999999985332221 1122111110000
Q ss_pred cccccccCccccC---------------ccCH-HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 969 NRESEVLDPFIYD---------------KQHD-KEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 969 ~~~~~~~d~~~~~---------------~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
..-.-.+||.+.+ .... -...+.++++.+.+.+|..+|||++|+++
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 0000112222211 0000 11236789999999999999999999876
No 404
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=3.2e-29 Score=259.77 Aligned_cols=304 Identities=18% Similarity=0.168 Sum_probs=250.4
Q ss_pred CCCCCCCcC---ceEEcCCCCCCCCCCCCCCCceEEEecCCCcccccccccccCCCCCcEEecCCCCCCCCCCccccCCC
Q 035998 57 ASSSDCCHW---VGITCNSSSSLGLNDSIGSGRVTGLFLYKRRLKGKLSESLGNLVQLRFLNLSHNLLKGTVPVSLVNLP 133 (1020)
Q Consensus 57 ~~~~~~C~w---~gv~C~~~~~~~~~~~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 133 (1020)
++..+-|+= .-|.|+..+.+.||.+.+ ...++++|..|+|+...+.+|+.+++|++||||+|+|+.+-|++|.+|.
T Consensus 37 CP~pC~Cs~~~g~~VdCr~~GL~eVP~~LP-~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~ 115 (498)
T KOG4237|consen 37 CPAPCTCSDVEGGIVDCRGKGLTEVPANLP-PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLA 115 (498)
T ss_pred CCCCcccCCCCCceEEccCCCcccCcccCC-CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhH
Confidence 344445664 449999999999999987 5788999999999988889999999999999999999999999999999
Q ss_pred CCCeeeccC-CCCCCCCCCcc-CCCCcceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCcccccccccccc
Q 035998 134 NLEVLDLSS-NDLSGPLPQTI-NLPSIQVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLC 211 (1020)
Q Consensus 134 ~L~~L~L~~-n~l~~~~p~~~-~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 211 (1020)
+|.+|-+-+ |+|+..+...| +|.+|+.|.+.-|++. -++...++.+++|..|.+-.|.+..+--..|..+.+++++.
T Consensus 116 ~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlh 194 (498)
T KOG4237|consen 116 SLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLH 194 (498)
T ss_pred hhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHh
Confidence 988877766 99998888888 8999999999999998 88899999999999999999999855555899999999999
Q ss_pred cccccc------------ccccchhhhhhcccccccccccccCCCCCcccccC-CCcc-EEEccCCcCcccCcccccCCc
Q 035998 212 LGMNDL------------TGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADL-SNLV-RLDVSSNNFSGNIPDVFAGLG 277 (1020)
Q Consensus 212 L~~N~l------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~-~L~Ls~N~l~~~~p~~~~~l~ 277 (1020)
+..|.+ ....|..+++..-..-..+.++++..+-+..|..- .++. .+....+...-.+...|..|+
T Consensus 195 lA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~ 274 (498)
T KOG4237|consen 195 LAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLP 274 (498)
T ss_pred hhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcc
Confidence 999983 23445566666666666777777765555444322 2222 222222233323335788999
Q ss_pred ccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecC
Q 035998 278 EFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLA 357 (1020)
Q Consensus 278 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 357 (1020)
+|+.|+|++|+|+++-+.+|.++..+++|.|..|+|..+....|.++..|++|+|.+|+|+..-|.+|..+.+|.+|+|-
T Consensus 275 ~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~ 354 (498)
T KOG4237|consen 275 NLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLL 354 (498)
T ss_pred cceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehc
Confidence 99999999999999999999999999999999999988877888899999999999999998889999999999999999
Q ss_pred CCccc
Q 035998 358 RNNFS 362 (1020)
Q Consensus 358 ~N~l~ 362 (1020)
.|.+.
T Consensus 355 ~Np~~ 359 (498)
T KOG4237|consen 355 SNPFN 359 (498)
T ss_pred cCccc
Confidence 88874
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=3.9e-28 Score=262.25 Aligned_cols=198 Identities=24% Similarity=0.314 Sum_probs=169.7
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeCC-CCEEEEEEecCCch---hhH-----HHHHHHHHHHHHcC---CCccceEeeEE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLPD-GRNVAIKRLSGDCG---QME-----REFRAEVEALSRAQ---HPNLVHLQGYC 807 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~-----~~~~~E~~~l~~l~---h~niv~l~~~~ 807 (1020)
...+|...+.+|+|+||.|+.|.++. ...|+||.+.++.- .+. -.+-.|+++|..++ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 34578999999999999999998764 56789998876531 111 12456999999997 99999999999
Q ss_pred eccCceEEEEEec-cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEE
Q 035998 808 MHKNDRLLIYSFM-ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHL 886 (1020)
Q Consensus 808 ~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 886 (1020)
++++.+|++||-- ++-+|.+++..+ +.+++.++..|++||+.|+++||++ +|||||||-+||.++.+|.+|+
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~k----p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFK----PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhcc----CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEE
Confidence 9999999999976 355888888765 6789999999999999999999999 9999999999999999999999
Q ss_pred eeccccccccCCCCcccccccccccCccCccccCCCCC-CchhhHHHHHHHHHHHHcCCCCCC
Q 035998 887 ADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVA-TYKGDVYSFGVVLLELLTGKRPMD 948 (1020)
Q Consensus 887 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~ 948 (1020)
+|||.+....+ ......+||..|.|||++.+.+| +..-|||++|+++|-++....||.
T Consensus 712 idfgsaa~~ks----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKS----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcC----CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999987633 23345789999999999998876 567999999999999999998884
No 406
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-26 Score=245.96 Aligned_cols=132 Identities=23% Similarity=0.364 Sum_probs=110.8
Q ss_pred ccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcC-----C---CccceEeeEEec--
Q 035998 741 TNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQ-----H---PNLVHLQGYCMH-- 809 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~-- 809 (1020)
..+|.+.++||.|.|++||+|.. ...+.||+|+.+... .-.+....|++++++++ | ..||+++++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 36899999999999999999964 467889999988653 23456778999999883 3 469999999964
Q ss_pred --cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEE
Q 035998 810 --KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILL 878 (1020)
Q Consensus 810 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 878 (1020)
..+++||+|++ |.+|-.+++.. .-+.++...+.+|++||+.||.|||++| +|||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s--~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYS--NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 46789999998 56787877754 2356889999999999999999999998 99999999999999
No 407
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2.5e-27 Score=240.09 Aligned_cols=255 Identities=24% Similarity=0.282 Sum_probs=190.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc--hhhHHHHHHHHHHHHHcCCCccceEeeEEecc------C
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC--GQMEREFRAEVEALSRAQHPNLVHLQGYCMHK------N 811 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 811 (1020)
..+|.-.+.+|.|+- .|..|... .+++||+|+..... ....+...+|...+..++|+||++++.+|.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777888999998 56555432 58899999876543 22335677899999999999999999998633 4
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..|+|||||+. +|.+.+.. .++-.+...++.|++.|++|+|+. +|+||||||+||++..++.+||.|||+
T Consensus 95 e~y~v~e~m~~-nl~~vi~~------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVILM------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred hHHHHHHhhhh-HHHHHHHH------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 57999999954 77777763 356678899999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
++.-. .....+.++.+..|.|||++.+..+.+.+||||+||++.||++|+.-|.+.. ..-+|.+....-+..
T Consensus 165 ar~e~---~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d-----~idQ~~ki~~~lgtp 236 (369)
T KOG0665|consen 165 ARTED---TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD-----HIDQWNKIIEQLGTP 236 (369)
T ss_pred hcccC---cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch-----HHHHHHHHHHHhcCC
Confidence 98642 2245667888999999999988889999999999999999999999886321 111222211111110
Q ss_pred ---------------------------ccc-cCccccC--ccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 972 ---------------------------SEV-LDPFIYD--KQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 972 ---------------------------~~~-~d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
.+. .|..... ..++-....+.+++.+|+-.+|++|.+++++++
T Consensus 237 d~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 237 DPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred CHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000 0100000 011122234789999999999999999999986
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=9.4e-26 Score=235.39 Aligned_cols=210 Identities=37% Similarity=0.585 Sum_probs=183.1
Q ss_pred eeccCCeEEEEEEeCC-CCEEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCChhh
Q 035998 750 IGCGGFGLVYRATLPD-GRNVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSLDY 827 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 827 (1020)
||+|.+|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 899999999866432 34678999999999999999999999999899999999999999999
Q ss_pred hhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC-CCCeEEeeccccccccCCCCcccccc
Q 035998 828 WLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG-NFGAHLADFGLARLILSPYDTHVTTD 906 (1020)
Q Consensus 828 ~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~ 906 (1020)
++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++++|||.+........ ....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~ 152 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKT 152 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhc
Confidence 987642 3578999999999999999999999 9999999999999999 89999999999987643221 2233
Q ss_pred cccccCccCccccCCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCH
Q 035998 907 LVGTLGYIPPEYGQAS-VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHD 985 (1020)
Q Consensus 907 ~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 985 (1020)
..+...|++||..... .++.++|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 5577899999998777 888999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 035998 986 KEMLRVLDIACLCLSESPKVRPTTQQLVSW 1015 (1020)
Q Consensus 986 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1015 (1020)
..+.+++.+|++.+|.+||++.++++.
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 247899999999999999999999864
No 409
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=3e-27 Score=259.77 Aligned_cols=253 Identities=25% Similarity=0.370 Sum_probs=204.5
Q ss_pred hccCCCcCCeeeccCCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
..++|+....+|.|.||.||+|+. .+++..|||+++-+......-+.+|+-+++..+|||||.+++.+...+..+++||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 456789999999999999999985 4789999999998877777788899999999999999999999999999999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+.+|+|.+.-+ ...++++.++..+++...+|++|||+. +-+|||||-.||++++.|.+|++|||.+..+...
T Consensus 93 ycgggslQdiy~----~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 93 YCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred ecCCCcccceee----ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhh
Confidence 999999876543 346889999999999999999999999 8999999999999999999999999999877532
Q ss_pred CCcccccccccccCccCcccc---CCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH-hhcccccc
Q 035998 899 YDTHVTTDLVGTLGYIPPEYG---QASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR-QENRESEV 974 (1020)
Q Consensus 899 ~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 974 (1020)
-.......||+.|||||+. +.+.|..++|||+.|+...|+---++|.....+ ++...-+. ........
T Consensus 166 --i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp------mr~l~LmTkS~~qpp~l 237 (829)
T KOG0576|consen 166 --IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP------MRALFLMTKSGFQPPTL 237 (829)
T ss_pred --hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch------HHHHHHhhccCCCCCcc
Confidence 2345568999999999963 567899999999999999999887777532211 11111111 11111122
Q ss_pred cCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 975 LDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 975 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
-|+. .....+.++++.|+..+|.+||+++.+++
T Consensus 238 kDk~-------kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 238 KDKT-------KWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cCCc-------cchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 2221 22245789999999999999999987764
No 410
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=1.8e-26 Score=246.24 Aligned_cols=265 Identities=24% Similarity=0.235 Sum_probs=200.9
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcC------CCccceEeeEEeccCc
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQ------HPNLVHLQGYCMHKND 812 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~~~ 812 (1020)
...+|.+....|+|-|++|..|... -|..||||++.... .+.+.=..|++++++|. --|+++++-.|....+
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 3468999999999999999999854 47799999998652 33455678999999995 3489999999999999
Q ss_pred eEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC-CCeEEeeccc
Q 035998 813 RLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN-FGAHLADFGL 891 (1020)
Q Consensus 813 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~ 891 (1020)
.|+|+|-+ .-+|.+.++.+ .....+....+..++.|+.-||.+|-.. +|+|.||||+|||++.. ..+||||||.
T Consensus 509 LClVFE~L-slNLRevLKKy-G~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKY-GRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred eEEEehhh-hchHHHHHHHh-CcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCcc
Confidence 99999976 45788888765 3344678889999999999999999988 99999999999999865 4589999999
Q ss_pred cccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHH------H
Q 035998 892 ARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIR------M 965 (1020)
Q Consensus 892 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~------~ 965 (1020)
|....... .+.+..+..|.|||++.+-+|+...|+||+||++||+.||+..|.+........+..-... +
T Consensus 584 A~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 584 ASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred cccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 98764322 2234456689999999999999999999999999999999999976554332222111110 0
Q ss_pred HhhcccccccCcc--------------------------------c-----cCccCHHHHHHHHHHHhhccCCCCCCCCC
Q 035998 966 RQENRESEVLDPF--------------------------------I-----YDKQHDKEMLRVLDIACLCLSESPKVRPT 1008 (1020)
Q Consensus 966 ~~~~~~~~~~d~~--------------------------------~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1008 (1020)
+...-..+-+|.. + ..+..+.....+.+|+..|+..||++|.|
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 0000000111100 0 11223455667899999999999999999
Q ss_pred HHHHHH
Q 035998 1009 TQQLVS 1014 (1020)
Q Consensus 1009 ~~evl~ 1014 (1020)
..+++.
T Consensus 740 ~nqAL~ 745 (752)
T KOG0670|consen 740 VNQALK 745 (752)
T ss_pred HHHHhc
Confidence 999886
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=9.4e-25 Score=230.67 Aligned_cols=199 Identities=33% Similarity=0.466 Sum_probs=172.9
Q ss_pred CCcCCeeeccCCeEEEEEEeCC-CCEEEEEEecCCchh-hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEecc
Q 035998 744 FDQANIIGCGGFGLVYRATLPD-GRNVAIKRLSGDCGQ-MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
|++.+.||.|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667899999999999998764 889999999876544 56788999999999999999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+++|.+++..... .+++..+..++.+++.++++||+. +++|+|++|+||+++.++.++++|||.+........
T Consensus 81 ~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~- 153 (225)
T smart00221 81 GGDLFDYLRKKGG---KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA- 153 (225)
T ss_pred CCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-
Confidence 9999999876421 178999999999999999999999 999999999999999999999999999987644321
Q ss_pred ccccccccccCccCcccc-CCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 035998 902 HVTTDLVGTLGYIPPEYG-QASVATYKGDVYSFGVVLLELLTGKRPMDM 949 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg~~pf~~ 949 (1020)
.......++..|++||.. ....++.++|||++|++++||++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122334677889999988 677788899999999999999999999964
No 412
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-25 Score=222.24 Aligned_cols=244 Identities=19% Similarity=0.317 Sum_probs=180.6
Q ss_pred cCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEE-eccCceEEEEE
Q 035998 742 NNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYC-MHKNDRLLIYS 818 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~-~~~~~~~lv~e 818 (1020)
+.|++.+.+|+|.||.+-+++++ +.+.+|+|.+.... ...++|.+|...--.+ .|.||+.-|++. +..+.++.++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 45889999999999999999976 57889999887653 2356788888765445 589999988765 45566679999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEE-c-CCCCeEEeecccccccc
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILL-D-GNFGAHLADFGLARLIL 896 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~-~~~~~kl~Dfg~~~~~~ 896 (1020)
|++.|+|.+-+.. ..+.+.....++.|+++|+.|||++ .+||||||.+|||+ + +..++|+||||..+..+
T Consensus 103 ~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred cCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence 9999999877654 3567788899999999999999999 99999999999998 3 34579999999988754
Q ss_pred CCCCcccccccccccCccCccccCC---C--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQA---S--VATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
.... ..--+..|.|||.... + ...+.+|+|.||+++|.++||+.||+.. ...+..++.|.....+...
T Consensus 175 ~tV~-----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka-~~~d~~Y~~~~~w~~rk~~- 247 (378)
T KOG1345|consen 175 TTVK-----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA-SIMDKPYWEWEQWLKRKNP- 247 (378)
T ss_pred ceeh-----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh-hccCchHHHHHHHhcccCc-
Confidence 3211 1223457889996432 2 3467899999999999999999999832 2234455655554433322
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCC
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPT 1008 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1008 (1020)
.-|....... ..+.++.++-+..+|++|=-
T Consensus 248 ---~~P~~F~~fs----~~a~r~Fkk~lt~~~~drck 277 (378)
T KOG1345|consen 248 ---ALPKKFNPFS----EKALRLFKKSLTPRFKDRCK 277 (378)
T ss_pred ---cCchhhcccC----HHHHHHHHHhcCCcccccch
Confidence 1122222222 24667778889999999933
No 413
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=1.2e-23 Score=269.72 Aligned_cols=357 Identities=21% Similarity=0.282 Sum_probs=241.5
Q ss_pred CCCceEEEecCCCcccc--cccccccCCCCCcEEecCCCC------CCCCCCccccCCC-CCCeeeccCCCCCCCCCCcc
Q 035998 83 GSGRVTGLFLYKRRLKG--KLSESLGNLVQLRFLNLSHNL------LKGTVPVSLVNLP-NLEVLDLSSNDLSGPLPQTI 153 (1020)
Q Consensus 83 ~~~~v~~l~l~~~~l~~--~~~~~l~~l~~L~~L~L~~n~------l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~ 153 (1020)
++.+|.++.+.-..+.. .-+.+|.++++|+.|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|..+
T Consensus 530 g~~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f 608 (1153)
T PLN03210 530 GTKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF 608 (1153)
T ss_pred ccceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC
Confidence 34567777666555432 224568999999999997654 3345788887775 5999999999886 456667
Q ss_pred CCCCcceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCccccccccccccccccccccccchhhhhhccccc
Q 035998 154 NLPSIQVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRL 233 (1020)
Q Consensus 154 ~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 233 (1020)
...+|++|+|++|++. .+|..+ ..+++|+.|+|++|.....+| .++.+++|++|+|++|.....+|..+..+++|+.
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~-~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~ 685 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGV-HSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLED 685 (1153)
T ss_pred CccCCcEEECcCcccc-cccccc-ccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCE
Confidence 8899999999999997 677766 568999999999887655666 4888999999999998776788999999999999
Q ss_pred ccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCCccccccccccccc
Q 035998 234 LGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSL 313 (1020)
Q Consensus 234 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 313 (1020)
|++++|..-+.+|..+ ++++|+.|++++|...+.+|.. ..+|+.|++++|.++ .+|..+ .+++|+.|++.++..
T Consensus 686 L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~ 759 (1153)
T PLN03210 686 LDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKS 759 (1153)
T ss_pred EeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccch
Confidence 9999875444677665 7889999999998766566653 357888889988887 455554 567788888776432
Q ss_pred c-------cccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCc
Q 035998 314 D-------GSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIY 386 (1020)
Q Consensus 314 ~-------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~ 386 (1020)
. ...+..+...++|+.|+|++|...+.+|..++++++|+.|++++|+..+.+|..+ ++++|+.|++++|..
T Consensus 760 ~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~- 837 (1153)
T PLN03210 760 EKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSR- 837 (1153)
T ss_pred hhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCc-
Confidence 2 1111122234567777777776666677777777777777777665444556554 566667777666531
Q ss_pred chhhHHHHHhhhcccchhhhhccccCCCCCCCccccccCceEEEecccccccccchhhhcCCCCcEEeccc-cccccccc
Q 035998 387 NLSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGSIPQWLRGCSKLQLVDLSW-NQLSGTIP 465 (1020)
Q Consensus 387 ~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p 465 (1020)
...++. ...+|+.|++.+|.+. .+|.++..+++|+.|+|++ |+|+ .+|
T Consensus 838 -------------------------L~~~p~----~~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~ 886 (1153)
T PLN03210 838 -------------------------LRTFPD----ISTNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVS 886 (1153)
T ss_pred -------------------------cccccc----cccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccC
Confidence 001110 1134455555555554 3455555555555555555 3333 345
Q ss_pred ccccCcCcCcEEeCCCC
Q 035998 466 VWFGGFQDLFYLDLSNN 482 (1020)
Q Consensus 466 ~~~~~l~~L~~L~Ls~N 482 (1020)
..+..+++|+.|++++|
T Consensus 887 ~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 887 LNISKLKHLETVDFSDC 903 (1153)
T ss_pred cccccccCCCeeecCCC
Confidence 55555555555555555
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=2.4e-27 Score=245.84 Aligned_cols=288 Identities=22% Similarity=0.216 Sum_probs=173.1
Q ss_pred ccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccC-CcCcccCcccccCCcccceeec
Q 035998 206 SLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSS-NNFSGNIPDVFAGLGEFQYLVA 284 (1020)
Q Consensus 206 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L 284 (1020)
.-.+++|..|+|+.+.+.+|..+++|+.|||++|+|+.+-|++|.++.+|.+|-+.+ |+|+....+.|++|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 344555666666655555555555555555555555555555555555554444433 5555544455555555555555
Q ss_pred ccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCccccc
Q 035998 285 HSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQ 364 (1020)
Q Consensus 285 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 364 (1020)
.-|++..+..+.|..+++|..|.+-+|.+..+.-..|..+..++.+.+..|.+- ...+++.+.. +...
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~-------~~a~ 215 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLAD-------DLAM 215 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc-----cccccchhhh-------HHhh
Confidence 555555544455555555555555555554333334444555555555544422 1111111111 1123
Q ss_pred CcccccCCCCCCeeeCCCCCCcchhhHHHHHhhhcccchhhhhccccCCCCCCCccccccCceEEEecccccccccchhh
Q 035998 365 IPETYKNFESLSYLSLSNSSIYNLSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGSIPQWL 444 (1020)
Q Consensus 365 ~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~l 444 (1020)
.|..++...-..-..+.++++..+++.- ....+..+.+-..+..+.....|...+..+++|++|++++|.++++-+.+|
T Consensus 216 ~~ietsgarc~~p~rl~~~Ri~q~~a~k-f~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aF 294 (498)
T KOG4237|consen 216 NPIETSGARCVSPYRLYYKRINQEDARK-FLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAF 294 (498)
T ss_pred chhhcccceecchHHHHHHHhcccchhh-hhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhh
Confidence 3444455555555555566655554321 111112222222223334445555567788899999999999999999999
Q ss_pred hcCCCCcEEecccccccccccccccCcCcCcEEeCCCCcccccCCCCCCCCcccccccCcCC
Q 035998 445 RGCSKLQLVDLSWNQLSGTIPVWFGGFQDLFYLDLSNNTFTGEIPKNLTGLPSLITRNISLE 506 (1020)
Q Consensus 445 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 506 (1020)
.++..+++|.|..|+|...-...|.++..|+.|+|.+|+|+..-|..|..+.+|.++++-.+
T Consensus 295 e~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~N 356 (498)
T KOG4237|consen 295 EGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSN 356 (498)
T ss_pred cchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccC
Confidence 99999999999999998777788999999999999999999889999999999988887433
No 415
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=4.5e-25 Score=232.78 Aligned_cols=202 Identities=29% Similarity=0.403 Sum_probs=166.2
Q ss_pred HHHhccCCCcCCeeeccCCeEEEEEEeC----CCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEeccC
Q 035998 737 ILESTNNFDQANIIGCGGFGLVYRATLP----DGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 737 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 811 (1020)
+....+.|...++||+|.|++||++... ..+.||+|.+..... ...+.+|++++..+ .+.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3344567899999999999999999743 467899999875432 34588999999999 5999999999999999
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC-CCCeEEeecc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG-NFGAHLADFG 890 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg 890 (1020)
+..+|+||++.....++... ++...+..+++.+..||+++|.+ |||||||||+|++.+. .+.-.|+|||
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred eeEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEech
Confidence 99999999999998888764 46788999999999999999999 9999999999999974 5678999999
Q ss_pred ccccccC----------------C-----------------CC---------cccccccccccCccCcccc-CCCCCCch
Q 035998 891 LARLILS----------------P-----------------YD---------THVTTDLVGTLGYIPPEYG-QASVATYK 927 (1020)
Q Consensus 891 ~~~~~~~----------------~-----------------~~---------~~~~~~~~gt~~y~aPE~~-~~~~~~~~ 927 (1020)
+|..... + .. ........||++|.|||++ ..+..+.+
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 9972110 0 00 0011125799999999976 45678899
Q ss_pred hhHHHHHHHHHHHHcCCCCCCCC
Q 035998 928 GDVYSFGVVLLELLTGKRPMDMC 950 (1020)
Q Consensus 928 ~DvwSlGvil~elltg~~pf~~~ 950 (1020)
+||||.|||+..+++++.||-..
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a 281 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKA 281 (418)
T ss_pred cceeeccceeehhhccccccccC
Confidence 99999999999999999999644
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=7.3e-24 Score=271.84 Aligned_cols=57 Identities=19% Similarity=0.394 Sum_probs=35.0
Q ss_pred CcceEEEecCCcceeccCccccCCCcccEEEccC-CcccccCCccccccccccccccccc
Q 035998 556 KKLHVFDLKHNNLSGPIPSELTGMTSLETLDLSY-NNLSGAIPISLEKLSFLSKFSVANN 614 (1020)
Q Consensus 556 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~ip~~l~~l~~L~~l~ls~N 614 (1020)
.+|+.|+|++|.++ .+|.++..+++|++|+|++ |+|+ .+|..+..+++|+.++++++
T Consensus 846 ~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 846 TNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred cccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 35566666666665 4666666666666666666 3344 46666666666666666655
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=9e-24 Score=250.53 Aligned_cols=262 Identities=25% Similarity=0.309 Sum_probs=160.1
Q ss_pred ccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCCccccccccc
Q 035998 230 KLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLR 309 (1020)
Q Consensus 230 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 309 (1020)
.-..|+|++|+|+ .+|..+. ++|+.|++++|+|+. +|.. .++|++|++++|+|+.. |.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLTSL-PVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccCcc-cCc---ccccceeecc
Confidence 4567888888887 5676665 478888888888874 4432 35677777777777743 432 2456666666
Q ss_pred ccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCcchh
Q 035998 310 NNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIYNLS 389 (1020)
Q Consensus 310 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~~l~ 389 (1020)
+|.++... .. +++|+.|+|++|+|+ .+|.. .++|+.|+|++|++++ +|.. ..+|+.|++++|.|+.+|
T Consensus 271 ~N~L~~Lp-~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~LP 338 (788)
T PRK15387 271 SNPLTHLP-AL---PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTSLP 338 (788)
T ss_pred CCchhhhh-hc---hhhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccccc
Confidence 66665322 11 245666666666666 33432 2456666666666653 2321 123445555555544332
Q ss_pred hHHHHHhhhcccchhhhhccccCCCCCCCccccccCceEEEecccccccccchhhhcCCCCcEEeccccccccccccccc
Q 035998 390 SALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGSIPQWLRGCSKLQLVDLSWNQLSGTIPVWFG 469 (1020)
Q Consensus 390 ~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 469 (1020)
. . ..+|+.|+|++|+|+ .+|..
T Consensus 339 ~----------------------------------------------------l---p~~Lq~LdLS~N~Ls-~LP~l-- 360 (788)
T PRK15387 339 T----------------------------------------------------L---PSGLQELSVSDNQLA-SLPTL-- 360 (788)
T ss_pred c----------------------------------------------------c---ccccceEecCCCccC-CCCCC--
Confidence 1 0 135667777777776 34442
Q ss_pred CcCcCcEEeCCCCcccccCCCCCCCCcccccccCcCCCCCCCcccceeecccccccccccccCCCCeeecccCccccCCC
Q 035998 470 GFQDLFYLDLSNNTFTGEIPKNLTGLPSLITRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIW 549 (1020)
Q Consensus 470 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~s~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~Ls~N~l~~~~~ 549 (1020)
..+|+.|++++|+|+ .+|..+.+ | ..|++++|+|++ +|
T Consensus 361 -p~~L~~L~Ls~N~L~-~LP~l~~~---L------------------------------------~~LdLs~N~Lt~-LP 398 (788)
T PRK15387 361 -PSELYKLWAYNNRLT-SLPALPSG---L------------------------------------KELIVSGNRLTS-LP 398 (788)
T ss_pred -Ccccceehhhccccc-cCcccccc---c------------------------------------ceEEecCCcccC-CC
Confidence 235666677777766 34433221 1 245566666664 33
Q ss_pred ccccCCCcceEEEecCCcceeccCccccCCCcccEEEccCCcccccCCccccccccccccccccccccccCCC
Q 035998 550 PEFGNLKKLHVFDLKHNNLSGPIPSELTGMTSLETLDLSYNNLSGAIPISLEKLSFLSKFSVANNHLTGRIPS 622 (1020)
Q Consensus 550 ~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~l~ls~N~l~g~~p~ 622 (1020)
.. .++|+.|++++|+|+ .+|..+ .+|+.|+|++|+|+ .+|.++.++++|+.|+|++|+|+|.+|.
T Consensus 399 ~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 399 VL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred Cc---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 32 246788888888887 477543 46778888888887 7888888888888888888888887764
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=2.5e-23 Score=246.80 Aligned_cols=268 Identities=25% Similarity=0.270 Sum_probs=195.6
Q ss_pred cccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeec
Q 035998 205 ASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVA 284 (1020)
Q Consensus 205 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 284 (1020)
..-..|+|++|.|+ .+|..+. ++|+.|++++|+|+. +|.. .++|++|+|++|+|+. +|.. .++|+.|++
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccCc-ccCc---ccccceeec
Confidence 34567999999999 6788775 489999999999994 5643 5899999999999995 4543 368899999
Q ss_pred ccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCccccc
Q 035998 285 HSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQ 364 (1020)
Q Consensus 285 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 364 (1020)
++|.++. +|..+ ++|+.|++++|+++.. |. .+++|+.|+|++|+|++ +|... .+|+.|++++|++++
T Consensus 270 s~N~L~~-Lp~lp---~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~- 336 (788)
T PRK15387 270 FSNPLTH-LPALP---SGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS- 336 (788)
T ss_pred cCCchhh-hhhch---hhcCEEECcCCccccc-cc---cccccceeECCCCcccc-CCCCc---ccccccccccCcccc-
Confidence 9999985 44433 5688999999999954 33 34789999999999995 55432 468899999999985
Q ss_pred CcccccCCCCCCeeeCCCCCCcchhhHHHHHhhhcccchhhhhccccCCCCCCCccccccCceEEEecccccccccchhh
Q 035998 365 IPETYKNFESLSYLSLSNSSIYNLSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGSIPQWL 444 (1020)
Q Consensus 365 ~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~l 444 (1020)
+|.. ..+|++|+|++|+|+.+|..
T Consensus 337 LP~l---p~~Lq~LdLS~N~Ls~LP~l----------------------------------------------------- 360 (788)
T PRK15387 337 LPTL---PSGLQELSVSDNQLASLPTL----------------------------------------------------- 360 (788)
T ss_pred cccc---ccccceEecCCCccCCCCCC-----------------------------------------------------
Confidence 5542 25799999999998766531
Q ss_pred hcCCCCcEEecccccccccccccccCcCcCcEEeCCCCcccccCCCCCCCCcccccccCcCCCCCCCcccceeecccccc
Q 035998 445 RGCSKLQLVDLSWNQLSGTIPVWFGGFQDLFYLDLSNNTFTGEIPKNLTGLPSLITRNISLEEPSPDFPFFMRRNVSARG 524 (1020)
Q Consensus 445 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~s~~~~~~~~~~~~~~~~~~~~ 524 (1020)
..+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|+ .+|..+.+ |
T Consensus 361 --p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt-~LP~l~s~---L-------------------------- 404 (788)
T PRK15387 361 --PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLT-SLPVLPSE---L-------------------------- 404 (788)
T ss_pred --Ccccceehhhccccc-cCccc---ccccceEEecCCccc-CCCCcccC---C--------------------------
Confidence 023445556666665 34432 234666666666665 23432211 1
Q ss_pred cccccccCCCCeeecccCccccCCCccccCCCcceEEEecCCcceeccCccccCCCcccEEEccCCcccccCCcccccc
Q 035998 525 LQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELTGMTSLETLDLSYNNLSGAIPISLEKL 603 (1020)
Q Consensus 525 l~~n~~~~~~~~l~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l 603 (1020)
..|++++|+|++ +|.. ..+|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|+|.+|..+..+
T Consensus 405 ----------~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 405 ----------KELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred ----------CEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 235556666654 3432 236788999999998 799999999999999999999999988877544
No 419
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=6.5e-24 Score=264.70 Aligned_cols=195 Identities=18% Similarity=0.229 Sum_probs=137.5
Q ss_pred cCC-CccceEeeEE-------eccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCe
Q 035998 795 AQH-PNLVHLQGYC-------MHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHI 866 (1020)
Q Consensus 795 l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 866 (1020)
++| +||++++++| ...+..+.++||+ +++|.+++... ...+++.+++.++.||++||+|||++ +|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 455 5788888877 2334567788987 55999999743 24589999999999999999999999 99
Q ss_pred EecCCCCCCEEEcCC-------------------CCeEEeeccccccccCCCC--------------cccccccccccCc
Q 035998 867 LHRDIKSSNILLDGN-------------------FGAHLADFGLARLILSPYD--------------THVTTDLVGTLGY 913 (1020)
Q Consensus 867 vH~Dlkp~NIll~~~-------------------~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~gt~~y 913 (1020)
+||||||+|||++.. +.+|++|||+++....... ........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999999999654 4456666666653211000 0001124578889
Q ss_pred cCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHH
Q 035998 914 IPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLD 993 (1020)
Q Consensus 914 ~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 993 (1020)
||||++.+..++.++|||||||++|||++|..|+.... ... ....... ..+.. ........+
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-----~~~---~~~~~~~-----~~~~~-----~~~~~~~~~ 243 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-----RTM---SSLRHRV-----LPPQI-----LLNWPKEAS 243 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-----HHH---HHHHHhh-----cChhh-----hhcCHHHHH
Confidence 99999999999999999999999999999988864211 111 1111000 01100 011223567
Q ss_pred HHhhccCCCCCCCCCHHHHHH
Q 035998 994 IACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 994 li~~cl~~dP~~RPs~~evl~ 1014 (1020)
++.+||+.+|.+||++.|+++
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHhCCCChhhCcChHHHhh
Confidence 888999999999999999986
No 420
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=1.3e-22 Score=205.60 Aligned_cols=166 Identities=22% Similarity=0.227 Sum_probs=124.2
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|.+++... ...+++.+++.++.|++.||+|||++ + ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~---- 62 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE---- 62 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc----
Confidence 6888888753 34689999999999999999999998 6 999999999999999 9998865332
Q ss_pred cccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDK 982 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 982 (1020)
...|++.|+|||++.+..++.++||||+||++|||+||+.||....... ............. ++.. ..
T Consensus 63 ---~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~------~~~~-~~ 130 (176)
T smart00750 63 ---QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPAD------DPRD-RS 130 (176)
T ss_pred ---cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhccC------Cccc-cc
Confidence 1257899999999999999999999999999999999999996432211 1111111110000 0000 00
Q ss_pred cCHHHH--HHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 035998 983 QHDKEM--LRVLDIACLCLSESPKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 983 ~~~~~~--~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1018 (1020)
...... ..+.+++.+||+.+|.+||++.|+++.+..
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 111111 258999999999999999999999997654
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.5e-23 Score=206.81 Aligned_cols=250 Identities=23% Similarity=0.376 Sum_probs=189.4
Q ss_pred CcCCeeeccCCeEEEEEEeCCCCEEEEEEecCC--chhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccC
Q 035998 745 DQANIIGCGGFGLVYRATLPDGRNVAIKRLSGD--CGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMEN 822 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 822 (1020)
....+|.+...|+.|+|+|+ |..+++|++.-. .....++|..|.-.++.+.||||.++++.|.......++..||+.
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 44567899999999999996 455666776533 244567899999999999999999999999999999999999999
Q ss_pred CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcc
Q 035998 823 GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTH 902 (1020)
Q Consensus 823 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 902 (1020)
|+|...+++. ....++..++++++.+||+|++|||+. ++-|.---+....+++|++.+++|+- +-+++..
T Consensus 272 gslynvlhe~--t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~kfsf------ 341 (448)
T KOG0195|consen 272 GSLYNVLHEQ--TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTKFSF------ 341 (448)
T ss_pred hHHHHHHhcC--ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-ccceeee------
Confidence 9999999875 334567789999999999999999998 44455557899999999998887641 1111111
Q ss_pred cccccccccCccCccccCCCCCC---chhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccc
Q 035998 903 VTTDLVGTLGYIPPEYGQASVAT---YKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFI 979 (1020)
Q Consensus 903 ~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 979 (1020)
......-.+.||+||.++.++-+ .++|+|||++++||+.|...||....+-+.- ..+..++. .+
T Consensus 342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg------mkialegl-----rv-- 408 (448)
T KOG0195|consen 342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG------MKIALEGL-----RV-- 408 (448)
T ss_pred eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh------hhhhhccc-----cc--
Confidence 11122346789999988776543 5899999999999999999999866553321 11111111 11
Q ss_pred cCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhcC
Q 035998 980 YDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSII 1020 (1020)
Q Consensus 980 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~il 1020 (1020)
..++.....+.+++.-|+..||.+||.++.|+-.||++.
T Consensus 409 --~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 409 --HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred --cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 112223346788999999999999999999999999873
No 422
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=8.1e-22 Score=200.58 Aligned_cols=259 Identities=18% Similarity=0.262 Sum_probs=196.1
Q ss_pred CCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceEEEEEec
Q 035998 743 NFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
.|.+.++||+|+||.++.|. .-++++||||.-..... .-+++.|.+.++.+ ..++|..++-+..+..+-.+|+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 58999999999999999997 44789999997543322 24678899999988 5789999988878888888999988
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC-----CCeEEeeccccccc
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN-----FGAHLADFGLARLI 895 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~Dfg~~~~~ 895 (1020)
|.+|.++..-. +..++..++..+|.|++.-++|+|++ .+|+|||||+|+||..- ..+.++|||+|+.+
T Consensus 107 -GPSLEDLFD~C---gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 107 -GPSLEDLFDLC---GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred -CcCHHHHHHHh---cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 66777765533 34689999999999999999999999 99999999999999643 34899999999999
Q ss_pred cCCCCc-----ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcc
Q 035998 896 LSPYDT-----HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENR 970 (1020)
Q Consensus 896 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 970 (1020)
.++... .......||.+||+-....++..+.+.|.=|+|-++.+.+.|..||++.........-+.+...++...
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~ 259 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTP 259 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCC
Confidence 887543 233457899999999999999999999999999999999999999998766544443333333333222
Q ss_pred cccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 971 ESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 971 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
+.+..+ . .++++..... -.-+.+-.+-|..+-+...+.++
T Consensus 260 i~~Lc~-----g-~P~efa~Yl~---yvR~L~F~E~PDYdylr~Lf~dv 299 (449)
T KOG1165|consen 260 IEVLCE-----G-FPEEFATYLR---YVRRLDFFETPDYDYLRKLFDDV 299 (449)
T ss_pred HHHHHh-----c-CHHHHHHHHH---HHHhcCcccCCCHHHHHHHHHHH
Confidence 222111 1 2333333333 33455667778877666655443
No 423
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=5.6e-22 Score=237.31 Aligned_cols=268 Identities=24% Similarity=0.396 Sum_probs=134.5
Q ss_pred CCCeeeccCCCCCCCCCCccCCCCcceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCcccccccccccccc
Q 035998 134 NLEVLDLSSNDLSGPLPQTINLPSIQVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLCLG 213 (1020)
Q Consensus 134 ~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 213 (1020)
+.+.|+++++.++.. |..+ .++|+.|+|++|+|+ .+|..++ ++|+.|++++|+++ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~LtsL-P~~I-p~~L~~L~Ls~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTTI-PACI-PEQITTLILDNNELK-SLPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCcC-Cccc-ccCCcEEEecCCCCC-cCChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 456677766666643 3222 135666677777666 5665543 35666666666665 3444332 356666666
Q ss_pred ccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccC
Q 035998 214 MNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRI 293 (1020)
Q Consensus 214 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 293 (1020)
+|+++ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|++++|+|++ +|..+. .+|+.|++++|+++. +
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-L 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-C
Confidence 66666 4454443 35666666666666 3444443 356666666666653 232221 234444444444442 2
Q ss_pred CCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCcccccCCC
Q 035998 294 PHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFE 373 (1020)
Q Consensus 294 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 373 (1020)
|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+. +
T Consensus 320 P~~l--------------------------~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~ 367 (754)
T PRK15370 320 PETL--------------------------PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--P 367 (754)
T ss_pred Cccc--------------------------cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--C
Confidence 2211 1345555555555542 343332 45555555555555 2343332 3
Q ss_pred CCCeeeCCCCCCcchhhHHHHHhhhcccchhhhhccccCCCCCCCccccccCceEEEecccccccccchhhhcCCCCcEE
Q 035998 374 SLSYLSLSNSSIYNLSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGSIPQWLRGCSKLQLV 453 (1020)
Q Consensus 374 ~L~~L~l~~N~i~~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L 453 (1020)
+|++|++++|+|+.+|..+. ..|+.|++++|.+. . +...+|..+..++++..|
T Consensus 368 ~L~~LdLs~N~Lt~LP~~l~-----~sL~~LdLs~N~L~-~---------------------LP~sl~~~~~~~~~l~~L 420 (754)
T PRK15370 368 TITTLDVSRNALTNLPENLP-----AALQIMQASRNNLV-R---------------------LPESLPHFRGEGPQPTRI 420 (754)
T ss_pred CcCEEECCCCcCCCCCHhHH-----HHHHHHhhccCCcc-c---------------------CchhHHHHhhcCCCccEE
Confidence 55556666665555554321 12333333333211 0 001223344455677778
Q ss_pred ecccccccccccccccCcCcCcEEeCCCCcccc
Q 035998 454 DLSWNQLSGTIPVWFGGFQDLFYLDLSNNTFTG 486 (1020)
Q Consensus 454 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 486 (1020)
++.+|.++. ..+.+|+.| ++.+.+.|
T Consensus 421 ~L~~Npls~------~tl~~L~~L-l~s~~~~g 446 (754)
T PRK15370 421 IVEYNPFSE------RTIQNMQRL-MSSVGYQG 446 (754)
T ss_pred EeeCCCccH------HHHHHHHHh-hhcccccC
Confidence 888887761 344445555 34444443
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.2e-21 Score=216.00 Aligned_cols=167 Identities=20% Similarity=0.188 Sum_probs=129.7
Q ss_pred HHhccCCCcCCeeeccCCeEEEEEEeC--CCCEEEEEEecCCc-----hhhHHHHHHHHHHHHHcCCCccce-EeeEEec
Q 035998 738 LESTNNFDQANIIGCGGFGLVYRATLP--DGRNVAIKRLSGDC-----GQMEREFRAEVEALSRAQHPNLVH-LQGYCMH 809 (1020)
Q Consensus 738 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~ 809 (1020)
....++|++.+.||+|+||+||+|+++ +++.||||+..... ....+.+.+|++++++++|+|+++ +++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---- 89 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---- 89 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence 344578999999999999999999864 57778999875331 223456899999999999999985 433
Q ss_pred cCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCC-CCCCEEEcCCCCeEEee
Q 035998 810 KNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDI-KSSNILLDGNFGAHLAD 888 (1020)
Q Consensus 810 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~D 888 (1020)
....++||||++|++|... .. .. ...++.|+++||+|||+. ||+|||| ||+||+++.++.+||+|
T Consensus 90 ~~~~~LVmE~~~G~~L~~~-~~-------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiD 155 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHLA-RP-------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVID 155 (365)
T ss_pred cCCcEEEEEccCCCCHHHh-Cc-------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEE
Confidence 2457999999999998622 10 01 146788999999999999 9999999 99999999999999999
Q ss_pred ccccccccCCCCccc------ccccccccCccCccccCCC
Q 035998 889 FGLARLILSPYDTHV------TTDLVGTLGYIPPEYGQAS 922 (1020)
Q Consensus 889 fg~~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 922 (1020)
||+|+.+........ .....+++.|+|||.+...
T Consensus 156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999997754322111 1345678889999987554
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.3e-20 Score=209.54 Aligned_cols=259 Identities=22% Similarity=0.266 Sum_probs=191.7
Q ss_pred CCCcCCeeeccCCeEEEEEEeCCC--CEEEEEEecCCchhhHHHHHHHHHHHHHcCC----CccceEeeEE-eccCceEE
Q 035998 743 NFDQANIIGCGGFGLVYRATLPDG--RNVAIKRLSGDCGQMEREFRAEVEALSRAQH----PNLVHLQGYC-MHKNDRLL 815 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 815 (1020)
+|.+.+.||+|+||.||.|...+. ..+|+|............+..|..++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999986543 4788888765433222267788888888863 6889998888 46777899
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC-----CCeEEeecc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN-----FGAHLADFG 890 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~Dfg 890 (1020)
||+.+ |.+|.++..... ...++..++..|+.|++.+|+++|+. |++||||||.|+.+... ..+.+.|||
T Consensus 99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99977 779988765543 56799999999999999999999999 99999999999999754 458999999
Q ss_pred ccc--cccCCCCc----cc--ccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHH
Q 035998 891 LAR--LILSPYDT----HV--TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWV 962 (1020)
Q Consensus 891 ~~~--~~~~~~~~----~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~ 962 (1020)
+++ ........ .. .....||..|++++...+...+.+.|+||++.++.|+..|..||........ ....
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~---~~~~ 249 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL---KSKF 249 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch---HHHH
Confidence 999 43222211 11 2235699999999999999999999999999999999999999965443322 1111
Q ss_pred HHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 963 IRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 963 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
........... .....+. .+.++...+-..+..++|....+...|++.
T Consensus 250 ~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 250 EKDPRKLLTDR------FGDLKPE---EFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred HHHhhhhcccc------ccCCChH---HHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 11111111110 1111223 344555555558899999999998877653
No 426
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=2.8e-21 Score=188.07 Aligned_cols=259 Identities=20% Similarity=0.256 Sum_probs=194.7
Q ss_pred ccCCCcCCeeeccCCeEEEEEE-eCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCC-CccceEeeEEeccCceEEEEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRAT-LPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQH-PNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 818 (1020)
...|.++++||.|+||.+|.|. ..+|..||||.-+..... .++.-|..+.+.+++ ..|..+..|..+...-.+||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 3579999999999999999997 568999999997765433 356778999999964 678888888888889999999
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC---CCeEEeeccccccc
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN---FGAHLADFGLARLI 895 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~~~~~ 895 (1020)
.+ |.+|.+...-. ...++..+++..+.|++.-++|+|.+ ++|||||||+|+|+.-+ ..+.++|||+|+.+
T Consensus 92 LL-GPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred cc-CccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence 88 77888776543 24678899999999999999999999 99999999999999633 45899999999988
Q ss_pred cCCCCc-----ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcc
Q 035998 896 LSPYDT-----HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENR 970 (1020)
Q Consensus 896 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 970 (1020)
.+.... .......||.+|.+-....+...+.+.|+=|+|.++.+.-.|..||++.....-....+.....+....
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ 244 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTP 244 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCC
Confidence 664332 223456899999998877777888999999999999999999999997665433222222222211111
Q ss_pred cccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 035998 971 ESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLD 1017 (1020)
Q Consensus 971 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1017 (1020)
... +-..+ +.++.-.+.-|-..--++-|+...+-+.+.
T Consensus 245 ie~-----LC~G~----P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 245 IEV-----LCKGF----PAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred HHH-----HhCCC----cHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 111 11111 124555666777777788888776666554
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.5e-21 Score=229.64 Aligned_cols=257 Identities=21% Similarity=0.274 Sum_probs=188.2
Q ss_pred cCCeeeccCCeEEEEEEeC-CCCEEEEEEec----C-CchhhH-HHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEE
Q 035998 746 QANIIGCGGFGLVYRATLP-DGRNVAIKRLS----G-DCGQME-REFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYS 818 (1020)
Q Consensus 746 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~----~-~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 818 (1020)
..+++|.|++|.|+.+... ....++.|.+. . ...... ..+..|+.+-..++|||++.....+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4678999999988877532 34444444433 1 111111 125667777788899999888777776666666699
Q ss_pred eccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCC
Q 035998 819 FMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 819 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
|+++ ||..++... ..++..++..++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+....-+
T Consensus 402 ~~~~-Dlf~~~~~~----~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN----GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHHhcc----cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 998888764 3578889999999999999999999 9999999999999999999999999999876655
Q ss_pred CCc--ccccccccccCccCccccCCCCCCc-hhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccccccc
Q 035998 899 YDT--HVTTDLVGTLGYIPPEYGQASVATY-KGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVL 975 (1020)
Q Consensus 899 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1020)
.+. ......+|+..|+|||++.+..|.+ ..||||.|+++..|.+|+.||......+..- .............
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~~~~~~~~~~~~~ 548 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----KTNNYSDQRNIFE 548 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----hhhcccccccccc
Confidence 544 5566788999999999998888764 6999999999999999999996443322210 0111111110000
Q ss_pred CccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHh
Q 035998 976 DPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS--WLDS 1018 (1020)
Q Consensus 976 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1018 (1020)
. ..........+-..++.+|++.||.+|.|+++|++ |+++
T Consensus 549 ~---~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 549 G---PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred C---hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 0 01111233345678999999999999999999987 6554
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=3.2e-21 Score=230.79 Aligned_cols=229 Identities=24% Similarity=0.402 Sum_probs=140.7
Q ss_pred CCcceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCccccccccccccccccccccccchhhhhhccccccc
Q 035998 156 PSIQVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLG 235 (1020)
Q Consensus 156 ~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 235 (1020)
.+...|++++++++ .+|..+. +.|+.|+|++|+++ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip---~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP---EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc---cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEE
Confidence 34667777777777 5666542 35666677777666 3444332 35666666666665 3343332 2455555
Q ss_pred ccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCCccccccccccccccc
Q 035998 236 LQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDG 315 (1020)
Q Consensus 236 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 315 (1020)
|++|+++ .+|..+. ++|+.|++++|+| +. +|..+. ++|+.|++++|+|+.
T Consensus 248 Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L------------------------~~-LP~~l~--~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 248 LSINRIT-ELPERLP--SALQSLDLFHNKI------------------------SC-LPENLP--EELRYLSVYDNSIRT 297 (754)
T ss_pred CcCCccC-cCChhHh--CCCCEEECcCCcc------------------------Cc-cccccC--CCCcEEECCCCcccc
Confidence 5555554 3343332 2445555555544 42 333332 356666666666664
Q ss_pred ccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCCcchhhHHHHH
Q 035998 316 SLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSIYNLSSALQVL 395 (1020)
Q Consensus 316 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l 395 (1020)
. |..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+.+|..
T Consensus 298 L-P~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~LP~~---- 364 (754)
T PRK15370 298 L-PAHLP--SGITHLNVQSNSLT-ALPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITVLPET---- 364 (754)
T ss_pred C-cccch--hhHHHHHhcCCccc-cCCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCcCChh----
Confidence 2 22222 46888888888888 4565443 689999999999995 676654 7899999999987665432
Q ss_pred hhhcccchhhhhccccCCCCCCCccccccCceEEEecccccccccchhhhcCCCCcEEecccccccccccccccCcCcCc
Q 035998 396 QQCRNLTTLVLTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGSIPQWLRGCSKLQLVDLSWNQLSGTIPVWFGGFQDLF 475 (1020)
Q Consensus 396 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 475 (1020)
+ .++|+.|+|++|+|+ .+|..+. ..|+
T Consensus 365 ------------------------------------------------l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL~ 391 (754)
T PRK15370 365 ------------------------------------------------L--PPTITTLDVSRNALT-NLPENLP--AALQ 391 (754)
T ss_pred ------------------------------------------------h--cCCcCEEECCCCcCC-CCCHhHH--HHHH
Confidence 1 135778888888887 4565553 3688
Q ss_pred EEeCCCCcccccCCCC
Q 035998 476 YLDLSNNTFTGEIPKN 491 (1020)
Q Consensus 476 ~L~Ls~N~l~~~~p~~ 491 (1020)
.|++++|+|+ .+|..
T Consensus 392 ~LdLs~N~L~-~LP~s 406 (754)
T PRK15370 392 IMQASRNNLV-RLPES 406 (754)
T ss_pred HHhhccCCcc-cCchh
Confidence 8888888887 45543
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=3.5e-19 Score=200.50 Aligned_cols=260 Identities=30% Similarity=0.445 Sum_probs=196.5
Q ss_pred CCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchh---hHHHHHHHHHHHHHcCCC-ccceEeeEEeccCceEEEEEe
Q 035998 744 FDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ---MEREFRAEVEALSRAQHP-NLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 819 (1020)
|.+.+.||.|+||.||++... ..+++|.+...... ....+.+|+..++.+.|+ +++++.+++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999876 88999998765432 356789999999999988 799999999777778999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC-CeEEeeccccccccCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF-GAHLADFGLARLILSP 898 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~ 898 (1020)
+.++++.+++...... ..++......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++.....
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999666654211 3678899999999999999999999 999999999999999988 7999999999865433
Q ss_pred CCcc----cccccccccCccCccccCC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-CcccHHHHHHHHHhhcc
Q 035998 899 YDTH----VTTDLVGTLGYIPPEYGQA---SVATYKGDVYSFGVVLLELLTGKRPMDMCKPK-GSRDLISWVIRMRQENR 970 (1020)
Q Consensus 899 ~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 970 (1020)
.... ......|+..|+|||...+ ..++...|+||+|++++++++|..||...... ............... .
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 234 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-S 234 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-c
Confidence 2221 3456789999999999887 68899999999999999999999997644321 011111111111100 0
Q ss_pred cccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 971 ESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 971 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......+ .........+.+++..|+..+|..|.+..+...
T Consensus 235 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 235 LASPLSP----SNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred cccccCc----cccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 0000000 000222345788999999999999999887654
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=2.8e-20 Score=190.00 Aligned_cols=171 Identities=13% Similarity=0.145 Sum_probs=133.3
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHH---------HHHHHHHHHHcCCCccceEeeEEecc
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMERE---------FRAEVEALSRAQHPNLVHLQGYCMHK 810 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~~~~~~~ 810 (1020)
..++|+..+++|.|+||.||.+.. +++.+|||.+.......++. +.+|++.+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 368899999999999999999766 57789999997654332222 68899999999999999999886643
Q ss_pred --------CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC
Q 035998 811 --------NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF 882 (1020)
Q Consensus 811 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 882 (1020)
...++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||+||+++++|
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC
Confidence 35789999999999977631 222 2456899999999999 999999999999999988
Q ss_pred CeEEeeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHH
Q 035998 883 GAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELL 941 (1020)
Q Consensus 883 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ell 941 (1020)
++++|||..+...... .. ..+.....+..++|+|++|+.+....
T Consensus 173 -i~liDfg~~~~~~e~~---a~-----------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRK---AK-----------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccchh---hH-----------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999999887542111 00 11334445667999999999876544
No 431
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=7.5e-21 Score=220.58 Aligned_cols=250 Identities=21% Similarity=0.235 Sum_probs=181.5
Q ss_pred CCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCch-hhHHHHHHHHHH--HHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 743 NFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCG-QMEREFRAEVEA--LSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 743 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+|...+.+|.+.|=+|.+|++++|. |+||+|-+..+ ...+.+.++++- ...++|||.+++..+-...+..|+|-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5677889999999999999998776 99999876542 223444443333 4455899999998887777888899999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
..+ +|.+.+.. ++.+...+.+.|+.|++.|+..+|+. ||+|||||.+|||++.-..+.++||..-+...-+.
T Consensus 103 vkh-nLyDRlST----RPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 103 VKH-NLYDRLST----RPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred Hhh-hhhhhhcc----chHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 866 55555543 46788889999999999999999999 99999999999999999999999998776654333
Q ss_pred Cccc-----ccccccccCccCccccCC----------CC-CCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHH
Q 035998 900 DTHV-----TTDLVGTLGYIPPEYGQA----------SV-ATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWV 962 (1020)
Q Consensus 900 ~~~~-----~~~~~gt~~y~aPE~~~~----------~~-~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~ 962 (1020)
+... ......-..|.|||-+.. .. .+++.||||+||+++|+++ |++||.-. .+.++.
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~aYr 248 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLAYR 248 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHhHh
Confidence 3211 112233458999995432 12 5789999999999999999 88988521 111110
Q ss_pred HH--HHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 963 IR--MRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 963 ~~--~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.. ...+.....+.|+ .+++++..|++.||++|.++++.++.-+++
T Consensus 249 ~~~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 249 SGNADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred ccCccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 00 0000111111111 478999999999999999999999875543
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=1.5e-19 Score=183.53 Aligned_cols=140 Identities=16% Similarity=0.131 Sum_probs=109.7
Q ss_pred CCeeeccCCeEEEEEEeCCCCEEEEEEecCCchh--h------------------------HHHHHHHHHHHHHcCCCcc
Q 035998 747 ANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ--M------------------------EREFRAEVEALSRAQHPNL 800 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~ni 800 (1020)
.+.||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999888999999998754211 0 1123459999999988877
Q ss_pred ceEeeEEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh-HhcCCCCeEecCCCCCCEEEc
Q 035998 801 VHLQGYCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYL-HQSCEPHILHRDIKSSNILLD 879 (1020)
Q Consensus 801 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlkp~NIll~ 879 (1020)
.....+.. ...++||||++++++...... ...++...+..++.|++.+|+|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 54433322 234899999999876544322 13678899999999999999999 688 999999999999998
Q ss_pred CCCCeEEeecccccccc
Q 035998 880 GNFGAHLADFGLARLIL 896 (1020)
Q Consensus 880 ~~~~~kl~Dfg~~~~~~ 896 (1020)
++.++++|||+|....
T Consensus 153 -~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 -DGKLYIIDVSQSVEHD 168 (190)
T ss_pred -CCcEEEEEccccccCC
Confidence 4789999999997653
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=1.8e-18 Score=172.38 Aligned_cols=187 Identities=17% Similarity=0.105 Sum_probs=140.9
Q ss_pred CcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhh----HHHHHHHHHHHHHcC-CCccceEeeEEeccCceEEEEEe
Q 035998 745 DQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQM----EREFRAEVEALSRAQ-HPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
.+...|++|+||+||.+.. .+.+++.+.+....... .+.+.+|+++++++. |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999998876 67888888887654321 125789999999995 5889999886 457999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCC-CCCCEEEcCCCCeEEeeccccccccCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDI-KSSNILLDGNFGAHLADFGLARLILSP 898 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~Dfg~~~~~~~~ 898 (1020)
++|.+|...... ....++.|++.+++++|+. ||+|||| ||+||+++.++.++|+|||++......
T Consensus 80 I~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 80 LAGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred ecCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 999988643211 1135778999999999999 9999999 799999999999999999999864322
Q ss_pred CCc----cc-------ccccccccCccCccccC--CCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 035998 899 YDT----HV-------TTDLVGTLGYIPPEYGQ--ASVATYKGDVYSFGVVLLELLTGKRPMDMC 950 (1020)
Q Consensus 899 ~~~----~~-------~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGvil~elltg~~pf~~~ 950 (1020)
... .. ......++.|++|+... ...--...++++.|..+|.++|+..|+-..
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 110 00 11123567888887432 223336789999999999999999887543
No 434
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.79 E-value=4e-19 Score=187.07 Aligned_cols=233 Identities=22% Similarity=0.325 Sum_probs=147.9
Q ss_pred CCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCC----------CccceEeeEEe-
Q 035998 744 FDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQH----------PNLVHLQGYCM- 808 (1020)
Q Consensus 744 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~- 808 (1020)
+...+.||.|+++.||.+++. +++++|||++.... ....+++++|.-....+.+ -.++..++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 345688999999999999875 58999999986443 2234556666655444322 12222222221
Q ss_pred --------cc---C-----ceEEEEEeccCCChhhhhhh---cCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEec
Q 035998 809 --------HK---N-----DRLLIYSFMENGSLDYWLHE---KLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHR 869 (1020)
Q Consensus 809 --------~~---~-----~~~lv~e~~~~g~L~~~l~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 869 (1020)
.. . ..+++|+-+ .+||.+++.. ............+..+..|+++.+++||+. |+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 11 1 235678877 4578776543 211122234455667779999999999999 99999
Q ss_pred CCCCCCEEEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCC--------CCCCchhhHHHHHHHHHHHH
Q 035998 870 DIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQA--------SVATYKGDVYSFGVVLLELL 941 (1020)
Q Consensus 870 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGvil~ell 941 (1020)
||+|+|++++++|.++++||+.....+.. ... ...+..|.+||.... -.++.+.|.|++|+++|.|+
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTR----YRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEE----EEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCce----eec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 99999999999999999999988765321 111 344578999996533 35789999999999999999
Q ss_pred cCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCC
Q 035998 942 TGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVR 1006 (1020)
Q Consensus 942 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1006 (1020)
+|..||+...+....+. ...... +.++.+..+|..+++.+|++|
T Consensus 245 C~~lPf~~~~~~~~~~~--------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW--------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG--------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc--------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999986543322211 111222 556678999999999999988
No 435
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=2e-18 Score=176.29 Aligned_cols=139 Identities=18% Similarity=0.185 Sum_probs=111.3
Q ss_pred CCeeeccCCeEEEEEEeCCCCEEEEEEecCCchh--------------------------hHHHHHHHHHHHHHcCCCcc
Q 035998 747 ANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ--------------------------MEREFRAEVEALSRAQHPNL 800 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~ni 800 (1020)
.+.||+|++|.||+|...+|+.||||++...... ....+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999878999999998764211 01123578999999999987
Q ss_pred ceEeeEEeccCceEEEEEeccCCChhhh-hhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-cCCCCeEecCCCCCCEEE
Q 035998 801 VHLQGYCMHKNDRLLIYSFMENGSLDYW-LHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-SCEPHILHRDIKSSNILL 878 (1020)
Q Consensus 801 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll 878 (1020)
.....+... ..++||||++|+++... +.. ..++..++..++.|++.++.++|+ . ||+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 555444333 34899999998855433 322 346778899999999999999999 8 99999999999999
Q ss_pred cCCCCeEEeecccccccc
Q 035998 879 DGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 879 ~~~~~~kl~Dfg~~~~~~ 896 (1020)
+ ++.++++|||+++...
T Consensus 152 ~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 152 H-DGKPYIIDVSQAVELD 168 (190)
T ss_pred E-CCCEEEEEcccceecC
Confidence 9 8899999999998764
No 436
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.75 E-value=2.4e-19 Score=199.36 Aligned_cols=225 Identities=25% Similarity=0.272 Sum_probs=175.0
Q ss_pred eeeccCCeEEEEEE----eCCCCEEEEEEecCCchh--hHHHHHHHHHHHHHcC-CCccceEeeEEeccCceEEEEEecc
Q 035998 749 IIGCGGFGLVYRAT----LPDGRNVAIKRLSGDCGQ--MEREFRAEVEALSRAQ-HPNLVHLQGYCMHKNDRLLIYSFME 821 (1020)
Q Consensus 749 ~lg~G~~g~V~~~~----~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 821 (1020)
.+|+|+||.|+.++ .+.+.-+|+|+.++.... .......|..++...+ ||.+|++...++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 36999999999874 335777899988765421 1123456778888886 9999999999999999999999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCc
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDT 901 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 901 (1020)
+|++...+... ..++..........++-|++++|+. +++|||+|++||+++.+|++++.|||.++......
T Consensus 81 gg~lft~l~~~----~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~-- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKE----VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK-- 151 (612)
T ss_pred cchhhhccccC----CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhh--
Confidence 99987766654 4567777777888899999999999 99999999999999999999999999998764321
Q ss_pred ccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccC
Q 035998 902 HVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYD 981 (1020)
Q Consensus 902 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 981 (1020)
..+||..|||||+.. ....++|.||||++++||+||..||.. +.+. ++.... .
T Consensus 152 ----~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~~~---~Il~~~-----------~ 204 (612)
T KOG0603|consen 152 ----IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DTMK---RILKAE-----------L 204 (612)
T ss_pred ----hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HHHH---HHhhhc-----------c
Confidence 128899999999987 677799999999999999999999974 1111 111110 0
Q ss_pred ccCHHHHHHHHHHHhhccCCCCCCCCCH
Q 035998 982 KQHDKEMLRVLDIACLCLSESPKVRPTT 1009 (1020)
Q Consensus 982 ~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1009 (1020)
..+.+....+.+++..+...+|..|.-.
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 1123334456778888888888888754
No 437
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.75 E-value=5.4e-18 Score=189.63 Aligned_cols=215 Identities=29% Similarity=0.440 Sum_probs=162.6
Q ss_pred HHcCCCccceEeeEEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCe-EecCC
Q 035998 793 SRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHI-LHRDI 871 (1020)
Q Consensus 793 ~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i-vH~Dl 871 (1020)
+.+.|.|+.+++|.+.+....++|.+|+..|+|.+.+... ...+++.....+.++|+.||+|+|.. +| .|+.+
T Consensus 2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~---~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE---DIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc---ccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 4678999999999999999999999999999999998763 45688999999999999999999987 55 99999
Q ss_pred CCCCEEEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCC-------CCCchhhHHHHHHHHHHHHcCC
Q 035998 872 KSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQAS-------VATYKGDVYSFGVVLLELLTGK 944 (1020)
Q Consensus 872 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlGvil~elltg~ 944 (1020)
+.+|.++|....+|++|||+.....+...........-..-|.|||.+.+. ..+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998766431111111222334579999987664 1467899999999999999999
Q ss_pred CCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhc
Q 035998 945 RPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVSWLDSI 1019 (1020)
Q Consensus 945 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1019 (1020)
.||+........ .+.+.+... .....+.|.+.... +....+..++..||..+|++||+++++-..++.+
T Consensus 156 ~~~~~~~~~~~~--~eii~~~~~--~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 156 GPFDLRNLVEDP--DEIILRVKK--GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred CccccccccCCh--HHHHHHHHh--cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 999865444332 122222222 11222233332211 2233688999999999999999999998877653
No 438
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=6e-18 Score=176.20 Aligned_cols=197 Identities=22% Similarity=0.256 Sum_probs=134.4
Q ss_pred CCCccceEeeEEecc---------------------------CceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHH
Q 035998 796 QHPNLVHLQGYCMHK---------------------------NDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIA 848 (1020)
Q Consensus 796 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~ 848 (1020)
+|||||++.++|.+. ...|+||.-++. +|..|+-.. ..+...+.-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-----~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-----HRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-----CCchHHHHHHH
Confidence 599999999887642 245788887754 788877654 34556778899
Q ss_pred HHHHHHHHHhHhcCCCCeEecCCCCCCEEE--cCCC--CeEEeeccccccccCC----CCcccccccccccCccCccccC
Q 035998 849 QGAARGLAYLHQSCEPHILHRDIKSSNILL--DGNF--GAHLADFGLARLILSP----YDTHVTTDLVGTLGYIPPEYGQ 920 (1020)
Q Consensus 849 ~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~--~~kl~Dfg~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~ 920 (1020)
.|+++|+.|||++ ||.|||+|.+|||+ |+|+ .+.++|||++---..- .........-|...-||||+..
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999999 99999999999999 3444 3689999997432110 0011112345677899999875
Q ss_pred CCCC------CchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHH
Q 035998 921 ASVA------TYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDI 994 (1020)
Q Consensus 921 ~~~~------~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l 994 (1020)
..+- -.|+|.|+.|.+.||+++...||...... ..+... .++...+. + +......+.++
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-~L~~r~-----Yqe~qLPa-----l----p~~vpp~~rql 489 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-LLDTRT-----YQESQLPA-----L----PSRVPPVARQL 489 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-eechhh-----hhhhhCCC-----C----cccCChHHHHH
Confidence 5432 24899999999999999999999752211 111111 11111111 1 11222357788
Q ss_pred HhhccCCCCCCCCCHHHHHHHH
Q 035998 995 ACLCLSESPKVRPTTQQLVSWL 1016 (1020)
Q Consensus 995 i~~cl~~dP~~RPs~~evl~~L 1016 (1020)
+...++.||.+|+++.-....|
T Consensus 490 V~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHhcCCccccCCccHHHhHH
Confidence 9999999999999976554433
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=7.7e-18 Score=201.08 Aligned_cols=199 Identities=24% Similarity=0.267 Sum_probs=162.6
Q ss_pred HHHhccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcC---CCccceEeeEEeccCce
Q 035998 737 ILESTNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQ---HPNLVHLQGYCMHKNDR 813 (1020)
Q Consensus 737 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~ 813 (1020)
.....+.|.+.+.||+|+||+||+|...+|+.||+|+-+..... +|.=-.+++.+++ -+-|..+...+...+..
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 34456678899999999999999999888999999997765432 2222344445554 24456666666777888
Q ss_pred EEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEc-------CCCCeEE
Q 035998 814 LLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLD-------GNFGAHL 886 (1020)
Q Consensus 814 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-------~~~~~kl 886 (1020)
++|+||.+.|+|.+++. ..+.++|.-++.+..|++..+++||.. +||||||||+|+++. +...++|
T Consensus 770 ~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred eeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence 99999999999999887 346789999999999999999999999 999999999999994 2345899
Q ss_pred eeccccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCC
Q 035998 887 ADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKR 945 (1020)
Q Consensus 887 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~ 945 (1020)
+|||.+..+.--.+.......++|-.+-.+|...++.++..+|.|.++-+++-|+.|++
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999977654334445566788999999999999999999999999999999999975
No 440
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=8.1e-20 Score=204.31 Aligned_cols=60 Identities=17% Similarity=0.175 Sum_probs=35.7
Q ss_pred CceEEEecccccc----cccchhhhcCCCCcEEeccccccccc----ccccccCc-CcCcEEeCCCCcc
Q 035998 425 NLKVLVIASCGLR----GSIPQWLRGCSKLQLVDLSWNQLSGT----IPVWFGGF-QDLFYLDLSNNTF 484 (1020)
Q Consensus 425 ~L~~L~l~~n~l~----~~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l 484 (1020)
.|+.|++.+|.++ ..+...+..+++|+++++++|.++.. +...+... +.|++||+.+|.+
T Consensus 251 ~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 251 SLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 3445555555443 12334455567788888888888744 33344444 6778888877754
No 441
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.74 E-value=6.1e-20 Score=169.54 Aligned_cols=180 Identities=27% Similarity=0.428 Sum_probs=116.5
Q ss_pred hhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCCcccccc
Q 035998 227 QLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLL 306 (1020)
Q Consensus 227 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 306 (1020)
.++..+.|.||+|+++ .+|+.++.+.+|+.|++++|+|+ ..|..++.+++|+.|+++-|++. ..|..|+.++.|++|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3444555555555555 45555555555555555555555 45555555566666666666655 556666666667777
Q ss_pred cccccccc-cccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCCC
Q 035998 307 NLRNNSLD-GSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSSI 385 (1020)
Q Consensus 307 ~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~i 385 (1020)
||++|++. ...|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+.+|.+- ..|..++.+..|+.|++.+|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 77666665 345666666777777777777776 67777777777777777777776 5677777777777777777777
Q ss_pred cchhhHHHHHhhhcccchhhhhcccc
Q 035998 386 YNLSSALQVLQQCRNLTTLVLTLNFR 411 (1020)
Q Consensus 386 ~~l~~~~~~l~~l~~L~~L~l~~n~~ 411 (1020)
+-+|..+..+.-..+-+.+.+..|.+
T Consensus 186 ~vlppel~~l~l~~~k~v~r~E~NPw 211 (264)
T KOG0617|consen 186 TVLPPELANLDLVGNKQVMRMEENPW 211 (264)
T ss_pred eecChhhhhhhhhhhHHHHhhhhCCC
Confidence 77777766665555555555555543
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=4.5e-20 Score=206.34 Aligned_cols=57 Identities=33% Similarity=0.350 Sum_probs=32.4
Q ss_pred EecCCCccc-ccccccccCCCCCcEEecCCCCCCC----CCCccccCCCCCCeeeccCCCCC
Q 035998 90 LFLYKRRLK-GKLSESLGNLVQLRFLNLSHNLLKG----TVPVSLVNLPNLEVLDLSSNDLS 146 (1020)
Q Consensus 90 l~l~~~~l~-~~~~~~l~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~ 146 (1020)
|+|.++.++ +.....+..+.+|+.|++++|.+++ .++..+...++|++|+++++.+.
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~ 64 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETG 64 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccC
Confidence 455555555 2334445556666666666666643 24445555666666666666554
No 443
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=3.4e-19 Score=164.62 Aligned_cols=164 Identities=34% Similarity=0.548 Sum_probs=119.2
Q ss_pred ccCCCCCcEEecCCCCCCCCCCccccCCCCCCeeeccCCCCCCCCCCccCCCCcceeeeccCccCCCCCccccccCCccc
Q 035998 105 LGNLVQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSNSLNGSVPTSICKNSSRIR 184 (1020)
Q Consensus 105 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~ 184 (1020)
+.++.+.+.|-||+|+++ .+|+.++.|.+|+.|++++|+|+..++....+++|+.|+++-|++.
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~--------------- 92 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN--------------- 92 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh---------------
Confidence 556677777888888887 6777788888888888888888765555556777777777666665
Q ss_pred EEEccCCCCCCCCCCccccccccccccccccccc-cccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCC
Q 035998 185 VINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLT-GGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSN 263 (1020)
Q Consensus 185 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 263 (1020)
.+|..|+.++.|+.|||.+|++. ...|..|+.++.|+.|+|++|.+. .+|+.++++++|+.|.+..|
T Consensus 93 -----------~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdn 160 (264)
T KOG0617|consen 93 -----------ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDN 160 (264)
T ss_pred -----------cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccC
Confidence 56666777777777777777774 356777777888888888888777 77777888888888888887
Q ss_pred cCcccCcccccCCcccceeecccccccccCCCCCc
Q 035998 264 NFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLS 298 (1020)
Q Consensus 264 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 298 (1020)
.+- ..|..++.++.|+.|.+.+|+++ .+|..++
T Consensus 161 dll-~lpkeig~lt~lrelhiqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 161 DLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELA 193 (264)
T ss_pred chh-hCcHHHHHHHHHHHHhcccceee-ecChhhh
Confidence 776 56777777777777777777777 3444443
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=7.4e-17 Score=165.00 Aligned_cols=136 Identities=17% Similarity=0.193 Sum_probs=106.0
Q ss_pred CcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHc-----CCCccceEeeEEeccC---ceE-E
Q 035998 745 DQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRA-----QHPNLVHLQGYCMHKN---DRL-L 815 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~~-l 815 (1020)
.-.++||+|+||.||. +++....+||+.........+.+.+|+++++.+ .||||+++++++.++. ..+ +
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 4467899999999996 443333479988765444567899999999999 5799999999998764 333 7
Q ss_pred EEEe--ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHH-HHhHhcCCCCeEecCCCCCCEEEcC----CCCeEEee
Q 035998 816 IYSF--MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGL-AYLHQSCEPHILHRDIKSSNILLDG----NFGAHLAD 888 (1020)
Q Consensus 816 v~e~--~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~D 888 (1020)
|+|| +.+++|.+++.+. .+++. ..++.|++.++ +|||++ +||||||||+||+++. ++.++|+|
T Consensus 83 I~e~~G~~~~tL~~~l~~~-----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC-----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EecCCCCcchhHHHHHHcc-----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 8999 5579999999653 24444 35677888777 999999 9999999999999974 34799999
Q ss_pred cccc
Q 035998 889 FGLA 892 (1020)
Q Consensus 889 fg~~ 892 (1020)
|+-+
T Consensus 153 g~G~ 156 (210)
T PRK10345 153 NIGE 156 (210)
T ss_pred CCCC
Confidence 5443
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=1.2e-16 Score=167.96 Aligned_cols=150 Identities=15% Similarity=0.131 Sum_probs=115.5
Q ss_pred HHHHHhccCCCcCCeeeccCCeEEEEEE--eCCCCEEEEEEecCCchh------------------------hHHHHHHH
Q 035998 735 DDILESTNNFDQANIIGCGGFGLVYRAT--LPDGRNVAIKRLSGDCGQ------------------------MEREFRAE 788 (1020)
Q Consensus 735 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E 788 (1020)
..+..-..-|++.+.||+|++|.||+|. ..+|+.||||++...... ....+.+|
T Consensus 21 ~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 100 (237)
T smart00090 21 YSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKE 100 (237)
T ss_pred HHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHH
Confidence 3344445568899999999999999998 568999999998743210 11235789
Q ss_pred HHHHHHcCCCc--cceEeeEEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCC-
Q 035998 789 VEALSRAQHPN--LVHLQGYCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPH- 865 (1020)
Q Consensus 789 ~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~- 865 (1020)
++.+.++.+.+ +.+++++ ...++||||++++++..+.... ......++..++.|++.++++||+. +
T Consensus 101 ~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---g~ 169 (237)
T smart00090 101 FRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD----VEPEEEEEFELYDDILEEMRKLYKE---GE 169 (237)
T ss_pred HHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccccc----CCcchHHHHHHHHHHHHHHHHHHhc---CC
Confidence 99999997533 3344432 2358999999998876654221 2345666789999999999999999 9
Q ss_pred eEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 866 ILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 866 ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|+||||||+||+++ ++.++++|||.+....
T Consensus 170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 170 LVHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 99999999999999 8899999999987653
No 446
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.66 E-value=5.9e-17 Score=188.80 Aligned_cols=214 Identities=24% Similarity=0.288 Sum_probs=144.8
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..+|+.++.|-.|+||.||.++++ ..+++|+|+ .++. .+.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~-----lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQN-----LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccc-----hhhhc--cccccCCccee------------------
Confidence 467899999999999999999876 467788843 3321 11110 22222333333
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCC
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPY 899 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 899 (1020)
||-...++. .+.++.+ ++.+++|+|+. +|+|||+||+|.+|+.-|++|++|||+++......
T Consensus 136 ---gDc~tllk~----~g~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ---GDCATLLKN----IGPLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ---chhhhhccc----CCCCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 332222332 2333332 27889999999 99999999999999999999999999987642111
Q ss_pred C-------------cccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH
Q 035998 900 D-------------THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR 966 (1020)
Q Consensus 900 ~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 966 (1020)
. .......+||+.|+|||++..+.|+..+|+|++|+|+||.+.|+.||.+..+.+-...+.....
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i-- 275 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI-- 275 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc--
Confidence 1 0112235899999999999999999999999999999999999999987655433222211111
Q ss_pred hhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 035998 967 QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQL 1012 (1020)
Q Consensus 967 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 1012 (1020)
.+.+- +..-..++.+++.+.++.+|.+|--....
T Consensus 276 ---~wpE~---------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga 309 (1205)
T KOG0606|consen 276 ---EWPEE---------DEALPPEAQDLIEQLLRQNPLCRLGTGGA 309 (1205)
T ss_pred ---ccccc---------CcCCCHHHHHHHHHHHHhChHhhcccchh
Confidence 11111 11112357789999999999999754433
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=8.8e-16 Score=158.25 Aligned_cols=145 Identities=18% Similarity=0.128 Sum_probs=113.5
Q ss_pred HHHHHhccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchh----------------------hHHHHHHHHHHH
Q 035998 735 DDILESTNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ----------------------MEREFRAEVEAL 792 (1020)
Q Consensus 735 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l 792 (1020)
.++......|.+.+.||+|+||.||+|..++|+.||||++...... ......+|+..+
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 3444555568889999999999999999888999999987643210 112356788899
Q ss_pred HHcCCCc--cceEeeEEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecC
Q 035998 793 SRAQHPN--LVHLQGYCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRD 870 (1020)
Q Consensus 793 ~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 870 (1020)
.++.|++ +++.++ ....++||||+++++|...... .....++.+++.++.++|+. +|+|||
T Consensus 88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~D 150 (198)
T cd05144 88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGD 150 (198)
T ss_pred HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCC
Confidence 9998774 444433 2456899999999998664321 23467889999999999998 999999
Q ss_pred CCCCCEEEcCCCCeEEeecccccccc
Q 035998 871 IKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 871 lkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|||+||++++++.++++|||.+....
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999997653
No 448
>PLN03150 hypothetical protein; Provisional
Probab=99.66 E-value=4e-16 Score=187.10 Aligned_cols=156 Identities=29% Similarity=0.522 Sum_probs=130.1
Q ss_pred CCCCHHHHHHHHHHHHHhccCC-CCCCCCCCCCCC----CcCceEEcCCCCCCCCCCCCCCCceEEEecCCCcccccccc
Q 035998 29 LTCNPNDLAALEDFMKNFESGI-DGWGTNASSSDC----CHWVGITCNSSSSLGLNDSIGSGRVTGLFLYKRRLKGKLSE 103 (1020)
Q Consensus 29 ~~~~~~~~~aL~~~k~~~~~~~-~~~~~~~~~~~~----C~w~gv~C~~~~~~~~~~~~~~~~v~~l~l~~~~l~~~~~~ 103 (1020)
..+.+.|.+||++||+++..+. .+|. +..| |.|.||.|+.... .+...|+.|+|.++.+.|.+|.
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~~~W~----g~~C~p~~~~w~Gv~C~~~~~------~~~~~v~~L~L~~n~L~g~ip~ 436 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLRFGWN----GDPCVPQQHPWSGADCQFDST------KGKWFIDGLGLDNQGLRGFIPN 436 (623)
T ss_pred cccCchHHHHHHHHHHhcCCcccCCCC----CCCCCCcccccccceeeccCC------CCceEEEEEECCCCCccccCCH
Confidence 4578899999999999987543 2453 3334 3799999964210 1123699999999999999999
Q ss_pred cccCCCCCcEEecCCCCCCCCCCccccCCCCCCeeeccCCCCCCCCCCcc-CCCCcceeeeccCccCCCCCccccccCCc
Q 035998 104 SLGNLVQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLSSNDLSGPLPQTI-NLPSIQVLDISSNSLNGSVPTSICKNSSR 182 (1020)
Q Consensus 104 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~-~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~ 182 (1020)
+++++++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+ ++++|++|+|++|+++|.+|..+.....+
T Consensus 437 ~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~ 516 (623)
T PLN03150 437 DISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLH 516 (623)
T ss_pred HHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhcccc
Confidence 99999999999999999999999999999999999999999999999988 89999999999999999999887654556
Q ss_pred ccEEEccCCCCC
Q 035998 183 IRVINLSVNYFS 194 (1020)
Q Consensus 183 L~~L~L~~N~l~ 194 (1020)
+..+++.+|...
T Consensus 517 ~~~l~~~~N~~l 528 (623)
T PLN03150 517 RASFNFTDNAGL 528 (623)
T ss_pred CceEEecCCccc
Confidence 667777777644
No 449
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.66 E-value=8.7e-16 Score=160.41 Aligned_cols=134 Identities=22% Similarity=0.339 Sum_probs=114.0
Q ss_pred CeeeccCCeEEEEEEeCCCCEEEEEEecCCchh--------hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 748 NIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ--------MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
+.||+|++|.||+|+. .|..|++|+....... ....+.+|++++..+.|++++....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6788999986643211 123577899999999999998888787778888999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
++|++|.+++... .. .+..++.+++.++.++|+. +++|||++|+||+++ ++.++++|||.++.
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988643 11 7889999999999999999 999999999999999 78899999999864
No 450
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=9.1e-17 Score=175.63 Aligned_cols=174 Identities=25% Similarity=0.380 Sum_probs=130.2
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..|+.|++++-++|.+|+.+... ....++.....++.|++.|+.| + +.+|||+||.||+...+.++||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 46799999999999999976533 3456788899999999999999 5 899999999999999999999999999
Q ss_pred cccccCCC----CcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHH
Q 035998 892 ARLILSPY----DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMR 966 (1020)
Q Consensus 892 ~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 966 (1020)
........ .....+..+||..||+||.+.++.|+.|+||||+|++++|+++ =..+|. .+.....+
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e---------r~~t~~d~- 472 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE---------RIATLTDI- 472 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH---------HHHhhhhh-
Confidence 88764432 1234456789999999999999999999999999999999998 222221 11111111
Q ss_pred hhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 035998 967 QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQ 1011 (1020)
Q Consensus 967 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 1011 (1020)
+.+ .++|....+++. =+.++.+++...|.+||++.+
T Consensus 473 r~g----~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 473 RDG----IIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred hcC----CCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHH
Confidence 111 112222222222 357888999999999995444
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=1.8e-15 Score=179.90 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=112.8
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEe-cCCc-------hhhHHHHHHHHHHHHHcCCCccceEeeEEeccC
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRL-SGDC-------GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKN 811 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 811 (1020)
....|...+.||+|+||.||+|.+... .+++|+. .+.. ....+.+.+|++++++++|++++....++.+..
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 344567789999999999999987544 3444432 2211 112345789999999999999998888887777
Q ss_pred ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccc
Q 035998 812 DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGL 891 (1020)
Q Consensus 812 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 891 (1020)
..++||||+++++|.+++. ....++.+++++++|||+. +++|||+||+||++ .++.++++|||+
T Consensus 410 ~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGl 473 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGL 473 (535)
T ss_pred CCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcc
Confidence 8899999999999988875 3467899999999999999 99999999999999 678899999999
Q ss_pred cccc
Q 035998 892 ARLI 895 (1020)
Q Consensus 892 ~~~~ 895 (1020)
++..
T Consensus 474 a~~~ 477 (535)
T PRK09605 474 GKYS 477 (535)
T ss_pred cccC
Confidence 9753
No 452
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.62 E-value=2.5e-15 Score=155.28 Aligned_cols=130 Identities=23% Similarity=0.355 Sum_probs=107.1
Q ss_pred eeeccCCeEEEEEEeCCCCEEEEEEecCCch---h-----hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEec
Q 035998 749 IIGCGGFGLVYRATLPDGRNVAIKRLSGDCG---Q-----MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFM 820 (1020)
Q Consensus 749 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 820 (1020)
.||+|+||.||+|.+ ++..|++|....... . ....+.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999996 578899998654321 1 1245778999999999887766666666677789999999
Q ss_pred cCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 821 ENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 821 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
+|++|.+++... . ..++.+++.+++++|+. +++|||++|+||+++ ++.++++|||.++.
T Consensus 80 ~g~~l~~~~~~~----~-------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEG----N-------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhc----H-------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999998876542 0 07899999999999999 999999999999999 88999999999865
No 453
>PLN03150 hypothetical protein; Provisional
Probab=99.59 E-value=2.4e-15 Score=180.32 Aligned_cols=137 Identities=34% Similarity=0.573 Sum_probs=112.8
Q ss_pred CeeecccCccccCCCccccCCCcceEEEecCCcceeccCccccCCCcccEEEccCCcccccCCccccccccccccccccc
Q 035998 535 PTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELTGMTSLETLDLSYNNLSGAIPISLEKLSFLSKFSVANN 614 (1020)
Q Consensus 535 ~~l~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~l~ls~N 614 (1020)
..|+|++|.++|.+|+.++.|++|+.|+|++|+|+|.+|..++.+++|+.|||++|+++|.+|..++++++|+.|+|++|
T Consensus 421 ~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 421 DGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred EEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCC--CCCCCcCCccccCCC-CCCCC-CCCCccCCcCCccccccccCCCceEEEEEEehhhhhHHHHH
Q 035998 615 HLTGRIPSG--GQFQTFPNSSFDGNN-LCGEH-RYSCTIDRESGQVKSAKKSRRNKYTIVGMAIGITFGSAFLL 684 (1020)
Q Consensus 615 ~l~g~~p~~--~~~~~~~~~~~~~n~-l~~~~-~~~c~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 684 (1020)
+++|.+|.. +.+..+....+.+|+ +||.+ ...|... .....++++++++++++++++
T Consensus 501 ~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~~~-------------~~~~~~i~~~~~~~~~~l~~~ 561 (623)
T PLN03150 501 SLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACGPH-------------LSVGAKIGIAFGVSVAFLFLV 561 (623)
T ss_pred cccccCChHHhhccccCceEEecCCccccCCCCCCCCccc-------------CCCceEEEEEhHHHHHHHHHH
Confidence 999999974 222334567789998 99875 3566421 123445666666655444333
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.53 E-value=6.8e-14 Score=137.58 Aligned_cols=135 Identities=21% Similarity=0.164 Sum_probs=114.2
Q ss_pred cCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCC--CccceEeeEEeccCceEEEEEeccCC
Q 035998 746 QANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQH--PNLVHLQGYCMHKNDRLLIYSFMENG 823 (1020)
Q Consensus 746 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 823 (1020)
+.+.||+|.++.||++...+ +.+++|....... ...+.+|++.++.++| .++++++++....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35779999999999999854 7899999876543 4578899999999976 58999998888778899999999988
Q ss_pred ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 824 SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 824 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
.+..+ +......++.+++++++++|.....+++|||++|+||++++.+.++++|||.++.
T Consensus 79 ~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 65433 4566778899999999999986445799999999999999989999999998864
No 455
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.53 E-value=5e-14 Score=144.02 Aligned_cols=136 Identities=22% Similarity=0.208 Sum_probs=99.0
Q ss_pred CCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhh---HHH---------------------HHHHHHHHHHcCCCc--c
Q 035998 747 ANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQM---ERE---------------------FRAEVEALSRAQHPN--L 800 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~---------------------~~~E~~~l~~l~h~n--i 800 (1020)
.+.||+|+||.||+|...+++.||||++....... ... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999987543211 111 135666666664433 3
Q ss_pred ceEeeEEeccCceEEEEEeccCCChhhh-hhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHh-cCCCCeEecCCCCCCEEE
Q 035998 801 VHLQGYCMHKNDRLLIYSFMENGSLDYW-LHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQ-SCEPHILHRDIKSSNILL 878 (1020)
Q Consensus 801 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll 878 (1020)
.+.+++ ...++||||++++.+... +.... .. ..+..++.+++.++.++|. . +|+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 444432 246899999999643221 11110 01 5678899999999999999 7 99999999999999
Q ss_pred cCCCCeEEeecccccccc
Q 035998 879 DGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 879 ~~~~~~kl~Dfg~~~~~~ 896 (1020)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8999999999997653
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.49 E-value=2.8e-13 Score=142.80 Aligned_cols=136 Identities=23% Similarity=0.273 Sum_probs=105.1
Q ss_pred CCeee-ccCCeEEEEEEeCCCCEEEEEEecCCc-------------hhhHHHHHHHHHHHHHcCCCcc--ceEeeEEecc
Q 035998 747 ANIIG-CGGFGLVYRATLPDGRNVAIKRLSGDC-------------GQMEREFRAEVEALSRAQHPNL--VHLQGYCMHK 810 (1020)
Q Consensus 747 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 810 (1020)
...|| .|+.|+||.+... +..+|||.+.... ......+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45687 8999999999874 7789999885311 0122457889999999998875 6677665433
Q ss_pred Cc----eEEEEEeccC-CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeE
Q 035998 811 ND----RLLIYSFMEN-GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAH 885 (1020)
Q Consensus 811 ~~----~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 885 (1020)
.. .++||||++| .+|.+++... .++.. .+.+++.++.+||+. ||+||||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 22 3599999997 6888887542 34443 357899999999999 999999999999999999999
Q ss_pred Eeeccccccc
Q 035998 886 LADFGLARLI 895 (1020)
Q Consensus 886 l~Dfg~~~~~ 895 (1020)
++|||.++..
T Consensus 183 LIDfg~~~~~ 192 (239)
T PRK01723 183 LIDFDRGELR 192 (239)
T ss_pred EEECCCcccC
Confidence 9999988753
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=6.3e-15 Score=173.87 Aligned_cols=257 Identities=26% Similarity=0.308 Sum_probs=188.6
Q ss_pred ccCCCcCCeeeccCCeEEEEEEeCC--CCEEEEEEecCCc--hhhHHHHHHHHHHHHHcC-CCccceEeeEEeccCceEE
Q 035998 741 TNNFDQANIIGCGGFGLVYRATLPD--GRNVAIKRLSGDC--GQMEREFRAEVEALSRAQ-HPNLVHLQGYCMHKNDRLL 815 (1020)
Q Consensus 741 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 815 (1020)
...|.+.+.||+|+|+.|-...... ...+|+|.+.... ......+..|..+-..+. |+|++.+++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 4467888889999999998886532 3456666665442 222234455777777776 9999999999999999999
Q ss_pred EEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhH-hcCCCCeEecCCCCCCEEEcCCC-CeEEeeccccc
Q 035998 816 IYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLH-QSCEPHILHRDIKSSNILLDGNF-GAHLADFGLAR 893 (1020)
Q Consensus 816 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~~~ 893 (1020)
+.||.+++++...+.. ......+...+-..+.|+..++.|+| .. ++.|||+||+|.+++..+ ..+++|||+|.
T Consensus 99 ~~~~s~g~~~f~~i~~--~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISH--PDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccCccccccccccccc--CCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 9999999998776631 11124555667788999999999999 77 999999999999999999 99999999998
Q ss_pred cccC-CCCccccccccc-ccCccCccccCC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhcc
Q 035998 894 LILS-PYDTHVTTDLVG-TLGYIPPEYGQA-SVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENR 970 (1020)
Q Consensus 894 ~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 970 (1020)
.+.. ...........| ++.|+|||...+ ....+..|+||.|+++.-+++|..|++...... ..+..|.....
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~~---- 248 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-GRYSSWKSNKG---- 248 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-ccceeeccccc----
Confidence 8765 444445556778 999999998877 466788999999999999999999997544332 11121111110
Q ss_pred cccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 971 ESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 971 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
......+... .....++..+++..+|..|.+.+++..
T Consensus 249 ---~~~~~~~~~~----~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 249 ---RFTQLPWNSI----SDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ---ccccCccccC----ChhhhhcccccccCCchhccccccccc
Confidence 0001111111 124567888999999999999887643
No 458
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=1e-13 Score=141.85 Aligned_cols=204 Identities=21% Similarity=0.298 Sum_probs=145.4
Q ss_pred HHHHHcCCCccceEeeEEeccC-----ceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCC
Q 035998 790 EALSRAQHPNLVHLQGYCMHKN-----DRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEP 864 (1020)
Q Consensus 790 ~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~ 864 (1020)
.-+-.+.|-|+|++..|+.+.+ ...++.|||..|++.+++++.......+......+|+.||..||.|||+. .|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 3344557999999999987543 45789999999999999998766667788888899999999999999986 88
Q ss_pred CeEecCCCCCCEEEcCCCCeEEeec--cccccccCCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHc
Q 035998 865 HILHRDIKSSNILLDGNFGAHLADF--GLARLILSPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT 942 (1020)
Q Consensus 865 ~ivH~Dlkp~NIll~~~~~~kl~Df--g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt 942 (1020)
.|+|+++..+-|++..+|-+|++-- ...................+.++|.|||.......+.++|||+||+...||..
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 9999999999999999999987531 11111111111122233566789999999888888899999999999999998
Q ss_pred CCCCCCCCCC-CCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 943 GKRPMDMCKP-KGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 943 g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+..--..... ......+...... .. ++ .=.+++.+|++..|..||+|.+++.
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~~-----le---n~------------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVIIG-----LE---NG------------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred heeccCCCcceeehhhhhhhheee-----cc---Cc------------cccCcCcccccCCCCCCcchhhhhc
Confidence 7653211111 0011111100000 00 00 0135788999999999999998865
No 459
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.38 E-value=2.2e-12 Score=147.91 Aligned_cols=141 Identities=22% Similarity=0.259 Sum_probs=102.7
Q ss_pred CCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhh----------------------------------------HHHHH
Q 035998 747 ANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQM----------------------------------------EREFR 786 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~ 786 (1020)
.+.||.|++|.||+|+.++|+.||||+.+...... +-++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36899999999999999999999999986542110 01245
Q ss_pred HHHHHHHHcC----CCccceEeeEEe-ccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHH-HHHHhHh
Q 035998 787 AEVEALSRAQ----HPNLVHLQGYCM-HKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAAR-GLAYLHQ 860 (1020)
Q Consensus 787 ~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~-~L~~LH~ 860 (1020)
+|++.+.+++ |.+-+.+-.++. ..+..++||||++|+++.++...... .. .+..++.+++. .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~---~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA---GL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc---CC---CHHHHHHHHHHHHHHHHHh
Confidence 5666666652 333344444443 34567999999999999887653211 11 23456666665 4788898
Q ss_pred cCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 861 SCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 861 ~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
. |++|+|++|.||+++.+++++++|||++..+.
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8 99999999999999999999999999998763
No 460
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.38 E-value=5.4e-14 Score=153.70 Aligned_cols=159 Identities=31% Similarity=0.408 Sum_probs=93.1
Q ss_pred CCCCccccccccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccC
Q 035998 196 TLSPGLGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAG 275 (1020)
Q Consensus 196 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 275 (1020)
.+|..+..+..|+.+.|..|.+. .+|..+.++..|++|+|+.|+++ .+|..++.|+ |+.|-+++|+++ .+|+.++.
T Consensus 89 elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~ 164 (722)
T KOG0532|consen 89 ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGL 164 (722)
T ss_pred cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCccccc
Confidence 34444445566666666666666 56666777777777777777776 5666666554 666777777766 55555666
Q ss_pred CcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEe
Q 035998 276 LGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNIN 355 (1020)
Q Consensus 276 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 355 (1020)
+..|..|+.+.|.+. .+|..++++.+|+.|.+..|++...++ .+..| .|..||+|.|+++ .+|-.|.+|+.|++|-
T Consensus 165 ~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~-El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~ 240 (722)
T KOG0532|consen 165 LPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPE-ELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQ 240 (722)
T ss_pred chhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCH-HHhCC-ceeeeecccCcee-ecchhhhhhhhheeee
Confidence 666666666666665 345555666666666666666553322 22222 3455555555555 4555555555555555
Q ss_pred cCCCccc
Q 035998 356 LARNNFS 362 (1020)
Q Consensus 356 L~~N~l~ 362 (1020)
|.+|.+.
T Consensus 241 LenNPLq 247 (722)
T KOG0532|consen 241 LENNPLQ 247 (722)
T ss_pred eccCCCC
Confidence 5555554
No 461
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.38 E-value=4.4e-14 Score=154.38 Aligned_cols=185 Identities=24% Similarity=0.387 Sum_probs=165.8
Q ss_pred cccccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCccccee
Q 035998 203 NCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYL 282 (1020)
Q Consensus 203 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 282 (1020)
.++.-...||+.|++. .+|..+..+..|+.+.|.+|.+. .+|.+++++..|++|||+.|+++ ..|..++.| -|+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l-pLkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL-PLKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcC-cceeE
Confidence 3455677899999999 89999999999999999999999 89999999999999999999999 777778777 58999
Q ss_pred ecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCccc
Q 035998 283 VAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFS 362 (1020)
Q Consensus 283 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 362 (1020)
.+++|+++ .+|..++.+.+|..||.+.|.+. .+|..+..+.+|+.|.+..|++. .+|..+. .-.|..||+|.|+++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNkis 224 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNKIS 224 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCcee
Confidence 99999999 78888999999999999999998 56667889999999999999999 7788888 567999999999999
Q ss_pred ccCcccccCCCCCCeeeCCCCCCcchhhHHHHHh
Q 035998 363 GQIPETYKNFESLSYLSLSNSSIYNLSSALQVLQ 396 (1020)
Q Consensus 363 ~~~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~ 396 (1020)
.+|-.|.+|+.|++|-|.+|+++.-|..+-.-+
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLqSPPAqIC~kG 257 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQSPPAQICEKG 257 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCCCChHHHHhcc
Confidence 799999999999999999999998887654333
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.37 E-value=8.3e-13 Score=152.02 Aligned_cols=198 Identities=31% Similarity=0.463 Sum_probs=116.9
Q ss_pred eeeccCCCCCCCCCCccCCCCcceeeeccCccCCCCCccccccC-CcccEEEccCCCCCCCCCCcccccccccccccccc
Q 035998 137 VLDLSSNDLSGPLPQTINLPSIQVLDISSNSLNGSVPTSICKNS-SRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMN 215 (1020)
Q Consensus 137 ~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~-~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 215 (1020)
.|+++.|.+...+.....++.++.|++.+|.++ .+|.... .. ++|+.|+++.|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~-~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNIT-DIPPLIG-LLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccc-cCccccc-cchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 466666666544444445566666666666666 4444432 22 25666666666665 44455666677777777777
Q ss_pred ccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCC
Q 035998 216 DLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPH 295 (1020)
Q Consensus 216 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 295 (1020)
+++ .+|...+.++.|+.|++++|+++ .+|........|++|++++|.+. ..+..+..+.++..+.+.+|++.. .+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccc
Confidence 776 45555556666677777777766 45555555555677777766533 345555666666666666666653 245
Q ss_pred CCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCC
Q 035998 296 SLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPT 343 (1020)
Q Consensus 296 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 343 (1020)
.++.++.++.|++++|.++.... +..+.+++.|++++|.+....|.
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 55666666666666666664433 55566666666666666544443
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.34 E-value=2e-12 Score=148.81 Aligned_cols=198 Identities=28% Similarity=0.416 Sum_probs=124.8
Q ss_pred ceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCcccccc-ccccccccccccccccchhhhhhccccccccc
Q 035998 159 QVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCA-SLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQ 237 (1020)
Q Consensus 159 ~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 237 (1020)
..|+++.|.+...+... ..++.++.|++.+|.++ .+++..+.+. +|+.|++++|++. .+|..+..+++|+.|+++
T Consensus 96 ~~l~~~~~~~~~~~~~~--~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~ 171 (394)
T COG4886 96 PSLDLNLNRLRSNISEL--LELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLS 171 (394)
T ss_pred ceeeccccccccCchhh--hcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccC
Confidence 46888888774233222 23467888888888887 5666666664 8888888888887 556677788888888888
Q ss_pred ccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCCccccccccccccccccc
Q 035998 238 DNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSL 317 (1020)
Q Consensus 238 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 317 (1020)
+|+++ .+|...+.+++|+.|++++|+++ .+|........|++|.+++|++. ..+..+.+++++..+.+.+|++...
T Consensus 172 ~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~- 247 (394)
T COG4886 172 FNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL- 247 (394)
T ss_pred Cchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-
Confidence 88887 55555556777888888888887 55555445555677777777433 3444555666666666666665532
Q ss_pred ccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCc
Q 035998 318 LLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIP 366 (1020)
Q Consensus 318 ~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 366 (1020)
+..+..++++++|++++|.++ .++. ++.+.+|+.|++++|.++...|
T Consensus 248 ~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 248 PESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred cchhccccccceecccccccc-cccc-ccccCccCEEeccCccccccch
Confidence 334444555555555555555 2222 5555555555555555554433
No 464
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.27 E-value=1.1e-10 Score=131.97 Aligned_cols=166 Identities=17% Similarity=0.229 Sum_probs=129.5
Q ss_pred eCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHH
Q 035998 763 LPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWD 842 (1020)
Q Consensus 763 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~ 842 (1020)
..++.+|.|..++...........+-++.++.++||+|+++++.+..++..|+|+|-+. -|..++.+. ...
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l-------~~~ 104 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL-------GKE 104 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh-------HHH
Confidence 44788999998877655445567778889999999999999999999999999999874 466666654 356
Q ss_pred HHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCcccccccccccCccCccccCCC
Q 035998 843 SRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHVTTDLVGTLGYIPPEYGQAS 922 (1020)
Q Consensus 843 ~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 922 (1020)
.....+.||+.||.|||..| +++|+++..+.|+++..|+.||++|.++........ ......--..|..|+.....
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCcc
Confidence 77788999999999999766 999999999999999999999999998865432111 11112222356777754433
Q ss_pred CCCchhhHHHHHHHHHHHHcC
Q 035998 923 VATYKGDVYSFGVVLLELLTG 943 (1020)
Q Consensus 923 ~~~~~~DvwSlGvil~elltg 943 (1020)
. -..|.|-||++++|++.|
T Consensus 181 ~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred c--cchhhhhHHHHHHHHhCc
Confidence 3 357999999999999999
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.23 E-value=8.7e-12 Score=140.00 Aligned_cols=248 Identities=22% Similarity=0.258 Sum_probs=178.8
Q ss_pred CCCcCCeeec--cCCeEEEEEEe---CCCCEEEEEEecCCc--hhhHHHHHHHHHHHHHc-CCCccceEeeEEeccCceE
Q 035998 743 NFDQANIIGC--GGFGLVYRATL---PDGRNVAIKRLSGDC--GQMEREFRAEVEALSRA-QHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 743 ~~~~~~~lg~--G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 814 (1020)
.|.+.+.+|. |.+|.||.+.. .++..+|+|+-+... +.....-.+|+....++ .|++.++.+..+.+.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566788999 99999999976 367889999844332 23233345567666666 4999999889989999999
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHH----HHHHhHhcCCCCeEecCCCCCCEEEcCC-CCeEEeec
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAAR----GLAYLHQSCEPHILHRDIKSSNILLDGN-FGAHLADF 889 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Df 889 (1020)
+-+|++. .++.++.+... ..++....+....+..+ |+.++|.. .++|-|+||.||+...+ ...+++||
T Consensus 195 iqtE~~~-~sl~~~~~~~~---~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPC---NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhccc---ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 9999885 68877776642 34666777888888888 99999999 99999999999999999 88999999
Q ss_pred cccccccCCCCccc---ccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHH
Q 035998 890 GLARLILSPYDTHV---TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMR 966 (1020)
Q Consensus 890 g~~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 966 (1020)
|+...+.+...... .....|...|++||... +.++.+.|+|++|.++.+..+|........... |... +
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~------W~~~-r 339 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS------WSQL-R 339 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCC------cccc-c
Confidence 99998876442211 12235777899999854 467789999999999999999887664321110 1000 0
Q ss_pred hhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 967 QENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 967 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
... +..++......++...+..|++.+|..|++++.+..
T Consensus 340 ~~~---------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 340 QGY---------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ccc---------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 000 001111111223455888999999999999887764
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.23 E-value=4e-11 Score=138.71 Aligned_cols=144 Identities=17% Similarity=0.213 Sum_probs=97.2
Q ss_pred cCCCcCCeeeccCCeEEEEEEeCC-CCEEEEEEecCCchh----------------------------------hHH---
Q 035998 742 NNFDQANIIGCGGFGLVYRATLPD-GRNVAIKRLSGDCGQ----------------------------------MER--- 783 (1020)
Q Consensus 742 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~--- 783 (1020)
..|+. +.||.|++|.||+|+.++ |+.||||+..+.... ..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45666 789999999999999887 999999999754210 011
Q ss_pred ---HHHHHHHHHHHcC----CCccceEeeEEec-cCceEEEEEeccCCChhhhhhhcCCC--CCCCCHHHHHHHHHHHHH
Q 035998 784 ---EFRAEVEALSRAQ----HPNLVHLQGYCMH-KNDRLLIYSFMENGSLDYWLHEKLDG--PSSLDWDSRLHIAQGAAR 853 (1020)
Q Consensus 784 ---~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~--~~~l~~~~~~~i~~~i~~ 853 (1020)
++.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++-.-...+ ...+....+..++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--- 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--- 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 2444555555552 4444555555543 56678999999999997743211111 011222223333333
Q ss_pred HHHHhHhcCCCCeEecCCCCCCEEEcCCC----CeEEeecccccccc
Q 035998 854 GLAYLHQSCEPHILHRDIKSSNILLDGNF----GAHLADFGLARLIL 896 (1020)
Q Consensus 854 ~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~~~~~~ 896 (1020)
++.. |++|+|+||.||+++.++ ++++.|||++..+.
T Consensus 276 ----if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 276 ----VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ----HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 3445 999999999999999888 99999999998763
No 467
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=3.7e-11 Score=120.70 Aligned_cols=131 Identities=21% Similarity=0.185 Sum_probs=97.1
Q ss_pred CCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccc-eEeeEEeccCceEEEEEeccCCCh
Q 035998 747 ANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLV-HLQGYCMHKNDRLLIYSFMENGSL 825 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~L 825 (1020)
.+.++.|.++.||+++.. ++.|++|....... ....+.+|+++++.+.+.+++ +++.+ .....++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcc
Confidence 357899999999999875 78899999765432 123567899999988665544 44443 23346899999999876
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcC--CCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 826 DYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSC--EPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 826 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
... . .....++.+++++++.||... ..+++|||++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~--~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTE--D----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc--c----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 532 0 111345678999999999882 12369999999999999 67899999998753
No 468
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=5.1e-12 Score=134.65 Aligned_cols=118 Identities=27% Similarity=0.271 Sum_probs=80.4
Q ss_pred cccCCCCCCeeeCCCCCCcchhhHHHHHhhhcccchhhhhccccCCCCCCCccccccCceEEEecccccccc-cchhhhc
Q 035998 368 TYKNFESLSYLSLSNSSIYNLSSALQVLQQCRNLTTLVLTLNFRNEKLPTDPRLHFANLKVLVIASCGLRGS-IPQWLRG 446 (1020)
Q Consensus 368 ~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~p~~l~~ 446 (1020)
....+++++.||||+|-+.++.......+++++|+.|+++.|....-.....-..++.|+.|.+.+|+++-. +-..+..
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~ 220 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLT 220 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHh
Confidence 344556666666666666666666666666777777777766655544444445678889999999998832 2333556
Q ss_pred CCCCcEEecccccccccccccccCcCcCcEEeCCCCccc
Q 035998 447 CSKLQLVDLSWNQLSGTIPVWFGGFQDLFYLDLSNNTFT 485 (1020)
Q Consensus 447 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 485 (1020)
+++|..|+|..|.....-.....-++.|+.|||++|++-
T Consensus 221 fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li 259 (505)
T KOG3207|consen 221 FPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI 259 (505)
T ss_pred CCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc
Confidence 788999999988644344455566778888888888875
No 469
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.21 E-value=2.5e-10 Score=114.58 Aligned_cols=138 Identities=16% Similarity=0.163 Sum_probs=100.6
Q ss_pred CCeeeccCCeEEEEEEeCC-------CCEEEEEEecCCch----------------------hhHHHH----HHHHHHHH
Q 035998 747 ANIIGCGGFGLVYRATLPD-------GRNVAIKRLSGDCG----------------------QMEREF----RAEVEALS 793 (1020)
Q Consensus 747 ~~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~~----~~E~~~l~ 793 (1020)
...||.|.-+.||.|...+ +..+|||+++.... ...+.+ ++|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999997543 47999998753210 012223 38999999
Q ss_pred HcCC--CccceEeeEEeccCceEEEEEeccCCChhh-hhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh-HhcCCCCeEec
Q 035998 794 RAQH--PNLVHLQGYCMHKNDRLLIYSFMENGSLDY-WLHEKLDGPSSLDWDSRLHIAQGAARGLAYL-HQSCEPHILHR 869 (1020)
Q Consensus 794 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~ 869 (1020)
++.. -++.+++++ ...++||||+.++.+.. .+++ ..++.++...+..+++.+|..+ |+. ++|||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHG 149 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHA 149 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 9854 455666654 56789999998754321 2222 1344556678889999999999 788 99999
Q ss_pred CCCCCCEEEcCCCCeEEeeccccccccC
Q 035998 870 DIKSSNILLDGNFGAHLADFGLARLILS 897 (1020)
Q Consensus 870 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 897 (1020)
|+++.||+++ ++.+.++|||.+.....
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 9999999997 46799999999876643
No 470
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.11 E-value=1.4e-11 Score=124.52 Aligned_cols=132 Identities=25% Similarity=0.245 Sum_probs=79.3
Q ss_pred cccccccccccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCcCcccCcccccCCcccc
Q 035998 201 LGNCASLEHLCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQ 280 (1020)
Q Consensus 201 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 280 (1020)
+.....|++|||++|.|+ .+.++..-+++++.|++|+|.|... ..+..+++|+.||||+|.++ .+..+-..+.+.+
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEe
Confidence 334456777777777777 5666677777778888888877732 23677777888888888776 3334444566667
Q ss_pred eeecccccccccCCCCCcCCcccccccccccccccccc-cCCCCCCCcCEEEcCCCccC
Q 035998 281 YLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLL-LNCPALTNLTSLDLGTNKFN 338 (1020)
Q Consensus 281 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 338 (1020)
.|.|+.|.|... ..++.+-+|..||+++|+|..... ..++++|.|+.|.|.+|.+.
T Consensus 356 tL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 356 TLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred eeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 777777766532 234445555555555555543221 23444444444444444444
No 471
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.09 E-value=2.6e-11 Score=122.52 Aligned_cols=43 Identities=33% Similarity=0.308 Sum_probs=31.3
Q ss_pred hhcCCCCcEEecccccccccc-cccccCcCcCcEEeCCCCcccc
Q 035998 444 LRGCSKLQLVDLSWNQLSGTI-PVWFGGFQDLFYLDLSNNTFTG 486 (1020)
Q Consensus 444 l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~ 486 (1020)
++.+.+|..||+++|+|...- -..+++++-|+.|.|-+|.+.+
T Consensus 370 L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 370 LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 556677888888888887321 2357788888888888888873
No 472
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=1.9e-11 Score=130.39 Aligned_cols=209 Identities=25% Similarity=0.261 Sum_probs=105.0
Q ss_pred cCCCCCcEEecCCCCCCCCCC--ccccCCCCCCeeeccCCCCCCCCCCcc---CCCCcceeeeccCccCCCCCccccccC
Q 035998 106 GNLVQLRFLNLSHNLLKGTVP--VSLVNLPNLEVLDLSSNDLSGPLPQTI---NLPSIQVLDISSNSLNGSVPTSICKNS 180 (1020)
Q Consensus 106 ~~l~~L~~L~L~~n~l~~~~p--~~l~~l~~L~~L~L~~n~l~~~~p~~~---~l~~L~~L~Ls~N~l~~~ip~~~~~~~ 180 (1020)
.++..|+...|.+..+. ..+ .....|++++.||||+|-|....|-.- .|++|+.|+|+.|++.-......-.
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~-- 194 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTL-- 194 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchh--
Confidence 34555555666555554 222 234455666666666665554332211 4556666666666554222221112
Q ss_pred CcccEEEccCCCCCCCCCCcccccccccccccccccccc-ccchhhhhhcccccccccccccCCCCCcccccCCCccEEE
Q 035998 181 SRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTG-GIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLD 259 (1020)
Q Consensus 181 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 259 (1020)
.++.|+.|.|+.|.++- .+..-...+++|+.|+|..|...+.......-+..|++||
T Consensus 195 ----------------------~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~Ld 252 (505)
T KOG3207|consen 195 ----------------------LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELD 252 (505)
T ss_pred ----------------------hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhcc
Confidence 33445555555555541 1111122345555555555532222223333345555555
Q ss_pred ccCCcCcccC-cccccCCcccceeecccccccccC-CCC-----CcCCcccccccccccccccccc-cCCCCCCCcCEEE
Q 035998 260 VSSNNFSGNI-PDVFAGLGEFQYLVAHSNRFTGRI-PHS-----LSNSPTLNLLNLRNNSLDGSLL-LNCPALTNLTSLD 331 (1020)
Q Consensus 260 Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~-p~~-----~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ 331 (1020)
|++|++-... -...+.++.|+.|+++.+.++.+- |+. ....++|++|+++.|++..... ..+..+++|+.|.
T Consensus 253 Ls~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~ 332 (505)
T KOG3207|consen 253 LSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLR 332 (505)
T ss_pred ccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhh
Confidence 5555554211 123344555555555555554332 222 2456778888888888764332 3455677888888
Q ss_pred cCCCccCC
Q 035998 332 LGTNKFNG 339 (1020)
Q Consensus 332 L~~N~l~~ 339 (1020)
+..|.|+.
T Consensus 333 ~~~n~ln~ 340 (505)
T KOG3207|consen 333 ITLNYLNK 340 (505)
T ss_pred cccccccc
Confidence 88888873
No 473
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.06 E-value=6.8e-12 Score=130.34 Aligned_cols=246 Identities=23% Similarity=0.285 Sum_probs=135.2
Q ss_pred CCceEEEecCCCcccc----cccccccCCCCCcEEecCCC---CCCCCCCcc-------ccCCCCCCeeeccCCCCCCCC
Q 035998 84 SGRVTGLFLYKRRLKG----KLSESLGNLVQLRFLNLSHN---LLKGTVPVS-------LVNLPNLEVLDLSSNDLSGPL 149 (1020)
Q Consensus 84 ~~~v~~l~l~~~~l~~----~~~~~l~~l~~L~~L~L~~n---~l~~~~p~~-------l~~l~~L~~L~L~~n~l~~~~ 149 (1020)
...++.++|++|.+.. .+.+.+.+.++|+..++|+- .+...+|+. +..+++|++||||+|.|.-..
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 3578889999988854 34556788888888888752 222245543 445678899999998886544
Q ss_pred CCcc-----CCCCcceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCcccccccccccccccccccccc---
Q 035998 150 PQTI-----NLPSIQVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGI--- 221 (1020)
Q Consensus 150 p~~~-----~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--- 221 (1020)
+..+ ++.+|++|+|.+|.+.-.--..+.+ -|..| ..|+. .++-+.|+.+..++|++....
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~---al~~l--~~~kk-------~~~~~~Lrv~i~~rNrlen~ga~~ 176 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR---ALFEL--AVNKK-------AASKPKLRVFICGRNRLENGGATA 176 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH---HHHHH--HHHhc-------cCCCcceEEEEeeccccccccHHH
Confidence 4433 5788888888888775111111111 11111 11111 233456777777777765322
Q ss_pred -chhhhhhcccccccccccccCCC----CCcccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCC
Q 035998 222 -ADDIFQLQKLRLLGLQDNQLSGK----LSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHS 296 (1020)
Q Consensus 222 -~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 296 (1020)
...|...+.|+.+.++.|.|... +..+|..+++|++|||..|-++...... +...
T Consensus 177 ~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~--------------------Laka 236 (382)
T KOG1909|consen 177 LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVA--------------------LAKA 236 (382)
T ss_pred HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHH--------------------HHHH
Confidence 23344455667777777766421 2234556667777777777665322111 1122
Q ss_pred CcCCcccccccccccccccccccCC-----CCCCCcCEEEcCCCccCC----CCCCCCCCCCCCCeEecCCCcc
Q 035998 297 LSNSPTLNLLNLRNNSLDGSLLLNC-----PALTNLTSLDLGTNKFNG----PLPTNLPRCRKLKNINLARNNF 361 (1020)
Q Consensus 297 ~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l 361 (1020)
++.++.|+.|++++|.+.......| ...++|++|.|.+|.|+. .+.......+.|..|+|++|++
T Consensus 237 L~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 237 LSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred hcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 3333444444444444432221111 124566666666666652 1222334466777777777777
No 474
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.06 E-value=3e-09 Score=101.49 Aligned_cols=144 Identities=19% Similarity=0.293 Sum_probs=108.6
Q ss_pred cCCeeeccCCeEEEEEEeCCCCEEEEEEe-cCCc--h-----hhHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEE
Q 035998 746 QANIIGCGGFGLVYRATLPDGRNVAIKRL-SGDC--G-----QMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIY 817 (1020)
Q Consensus 746 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~~--~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 817 (1020)
...++-+|+-+.|+++.+ .|+.++||.- .+.- + -..+...+|++.+.+++--.|....-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 567899999999999998 4777777743 2221 1 12245678999999987667766666777777888999
Q ss_pred EeccC-CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC---eEEeeccccc
Q 035998 818 SFMEN-GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG---AHLADFGLAR 893 (1020)
Q Consensus 818 e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~~~ 893 (1020)
||++| .++.+++....... ...+....++..|-+.+.-||.. ++|||||..+||++.+++. +.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~~~--~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE--SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHccCc--ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99987 47788887654322 22233368899999999999999 9999999999999965543 5899999986
Q ss_pred cc
Q 035998 894 LI 895 (1020)
Q Consensus 894 ~~ 895 (1020)
.-
T Consensus 165 ~s 166 (229)
T KOG3087|consen 165 VS 166 (229)
T ss_pred cc
Confidence 43
No 475
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=2.5e-09 Score=102.85 Aligned_cols=131 Identities=24% Similarity=0.377 Sum_probs=102.3
Q ss_pred CeeeccCCeEEEEEEeCCCCEEEEEEecCCc---hh-----hHHHHHHHHHHHHHcCCCccceEeeEEeccCceEEEEEe
Q 035998 748 NIIGCGGFGLVYRATLPDGRNVAIKRLSGDC---GQ-----MEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRLLIYSF 819 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 819 (1020)
..+++|+-+.+|.+.+. |.++++|.-.+.. +. ......+|+.++.+++--.|....=+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45889999999999774 4456776543221 11 113456799999999877777666677788888999999
Q ss_pred ccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 820 MENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 820 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
++|..|.+++.+. ...++..+-.-+.-||.. +|||+|+.++||++..++ +.++|||++..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999988888753 245667777788889999 999999999999998775 99999999874
No 476
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.02 E-value=3.7e-11 Score=138.39 Aligned_cols=243 Identities=24% Similarity=0.269 Sum_probs=115.5
Q ss_pred CCCCCeeeccCCCCCCCCCCccCCCCcceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCcccccccccccc
Q 035998 132 LPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLC 211 (1020)
Q Consensus 132 l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 211 (1020)
+..++.+++..|.|.......-.+.+|..|++.+|+|. .+... ...+++|++|++++|+|+... .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~-~i~~~-l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIE-KIENL-LSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhhhhcccccccceeeeeccccchh-hcccc-hhhhhcchheecccccccccc--chhhccchhhhe
Confidence 33444444444444431111223444444444444443 11110 123444555555555554322 234555677777
Q ss_pred ccccccccccchhhhhhcccccccccccccCCCCC-cccccCCCccEEEccCCcCcccCcccccCCcccceeeccccccc
Q 035998 212 LGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLS-PSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFT 290 (1020)
Q Consensus 212 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 290 (1020)
+++|.|+. ...+..+..|+.+++++|+++...+ . ...+.+++.+++.+|.+.. ...+..+..+..+++..|+++
T Consensus 147 l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccce
Confidence 77777763 2334446677777777777764433 2 4556667777777776652 223333444455566666665
Q ss_pred ccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCccccc---Ccc
Q 035998 291 GRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQ---IPE 367 (1020)
Q Consensus 291 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~---~p~ 367 (1020)
..-+-.......|+.+++++|.+.... ..+..+.++..|++.+|++... ..+.....+..+.+..|.+... ...
T Consensus 222 ~~~~l~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (414)
T KOG0531|consen 222 KLEGLNELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQE 298 (414)
T ss_pred eccCcccchhHHHHHHhcccCcccccc-ccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhcc
Confidence 332211111112566666666665221 3344455556666666655421 1233334455555555554311 111
Q ss_pred c-ccCCCCCCeeeCCCCCCc
Q 035998 368 T-YKNFESLSYLSLSNSSIY 386 (1020)
Q Consensus 368 ~-~~~l~~L~~L~l~~N~i~ 386 (1020)
. ....+.++...+..|.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~ 318 (414)
T KOG0531|consen 299 YITSAAPTLVTLTLELNPIR 318 (414)
T ss_pred ccccccccccccccccCccc
Confidence 1 333444555555555443
No 477
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.02 E-value=2.5e-09 Score=112.63 Aligned_cols=142 Identities=20% Similarity=0.266 Sum_probs=108.5
Q ss_pred CeeeccCCeEEEEEEeCCCCEEEEEEecCCch-hhHHHHHHHHHHHHHcCCC--ccceEeeEEeccC---ceEEEEEecc
Q 035998 748 NIIGCGGFGLVYRATLPDGRNVAIKRLSGDCG-QMEREFRAEVEALSRAQHP--NLVHLQGYCMHKN---DRLLIYSFME 821 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~---~~~lv~e~~~ 821 (1020)
+.++.|..+.||+++..+|+.+++|....... .....+.+|+++++.+++. .+.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999987778999999765432 1345688999999999764 4566777765532 5689999999
Q ss_pred CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcC---------------------------------------
Q 035998 822 NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSC--------------------------------------- 862 (1020)
Q Consensus 822 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------- 862 (1020)
|.++...... ..++..+...++.++++++++||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9887665421 24566777788888888888888421
Q ss_pred --------------CCCeEecCCCCCCEEEcC--CCCeEEeecccccc
Q 035998 863 --------------EPHILHRDIKSSNILLDG--NFGAHLADFGLARL 894 (1020)
Q Consensus 863 --------------~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~~~~ 894 (1020)
...++|+|++|.||+++. ++.+.++||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246899999999999998 66689999998753
No 478
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.02 E-value=2.3e-11 Score=126.48 Aligned_cols=249 Identities=19% Similarity=0.248 Sum_probs=132.3
Q ss_pred cccccccccccccccccc----cchhhhhhccccccccccc---ccCCCCC-------cccccCCCccEEEccCCcCccc
Q 035998 203 NCASLEHLCLGMNDLTGG----IADDIFQLQKLRLLGLQDN---QLSGKLS-------PSIADLSNLVRLDVSSNNFSGN 268 (1020)
Q Consensus 203 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N---~l~~~~~-------~~~~~l~~L~~L~Ls~N~l~~~ 268 (1020)
.+.+++.++|++|.+... +...+.+.++|+..++++- ++...+| .++...++|++||||.|.|...
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 344555555555555422 2222333445555555442 1111223 2334456788888888877644
Q ss_pred Ccccc----cCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCCCC--
Q 035998 269 IPDVF----AGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGPLP-- 342 (1020)
Q Consensus 269 ~p~~~----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-- 342 (1020)
.+..| .....|++|+|.+|.+.-.--..++. .|..|. .|+ ..+.-++|+++..++|++.....
T Consensus 108 g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga~~ 176 (382)
T KOG1909|consen 108 GIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENGGATA 176 (382)
T ss_pred chHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeeccccccccHHH
Confidence 44333 33455555555555543211111111 122222 111 12334667777777777763222
Q ss_pred --CCCCCCCCCCeEecCCCccccc----CcccccCCCCCCeeeCCCCCCcchhhHHHHHhhhcccchhhhhccccCCCCC
Q 035998 343 --TNLPRCRKLKNINLARNNFSGQ----IPETYKNFESLSYLSLSNSSIYNLSSALQVLQQCRNLTTLVLTLNFRNEKLP 416 (1020)
Q Consensus 343 --~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 416 (1020)
..|...+.|+.+.++.|.|... ....|..+++|+.|||.+|.++.-.... +
T Consensus 177 ~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~--L--------------------- 233 (382)
T KOG1909|consen 177 LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVA--L--------------------- 233 (382)
T ss_pred HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHH--H---------------------
Confidence 2344556677777777766421 1234566777777777777665432210 0
Q ss_pred CCccccccCceEEEecccccccccchhh-----hcCCCCcEEecccccccc----cccccccCcCcCcEEeCCCCccc
Q 035998 417 TDPRLHFANLKVLVIASCGLRGSIPQWL-----RGCSKLQLVDLSWNQLSG----TIPVWFGGFQDLFYLDLSNNTFT 485 (1020)
Q Consensus 417 ~~~~~~~~~L~~L~l~~n~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 485 (1020)
..+...++.|+.+++.+|.+...--.+| ...++|+.|.|.+|.|+. .+-..+...+.|..|+|++|++.
T Consensus 234 akaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 234 AKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 0112234456677777776664333222 246789999999999873 23445566888999999999983
No 479
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.99 E-value=1e-10 Score=134.73 Aligned_cols=249 Identities=26% Similarity=0.255 Sum_probs=174.6
Q ss_pred cCCCCCcEEecCCCCCCCCCCccccCCCCCCeeeccCCCCCCCCCCccCCCCcceeeeccCccCCCCCccccccCCcccE
Q 035998 106 GNLVQLRFLNLSHNLLKGTVPVSLVNLPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSNSLNGSVPTSICKNSSRIRV 185 (1020)
Q Consensus 106 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~ 185 (1020)
..+..++.+++..|.+. .+-..+..+++|+.|++.+|+|..+....-.+++|++|+|++|.|+..-+- ..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~l---~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEGL---STLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccccch---hhccchhh
Confidence 45677777778888887 444557778888888888888876544344688888888888888733322 34556888
Q ss_pred EEccCCCCCCCCCCccccccccccccccccccccccchh-hhhhcccccccccccccCCCCCcccccCCCccEEEccCCc
Q 035998 186 INLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADD-IFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNN 264 (1020)
Q Consensus 186 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 264 (1020)
|++++|.|+.. ..+..+++|+.+++++|+++..-+ . ...+.+++.+.+.+|.+.. ...+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhc--ccchHHHHHHHHhhccccc
Confidence 88888888632 345568888889999998884433 2 5778888889999998873 2345555666667888888
Q ss_pred CcccCcccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCcCEEEcCCCccCCC---C
Q 035998 265 FSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNLTSLDLGTNKFNGP---L 341 (1020)
Q Consensus 265 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~ 341 (1020)
++..-+-......+|+.+++++|++.. .+..+..+..+..|++.+|++...- .+...+.+..+.+..|.+... .
T Consensus 220 i~~~~~l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (414)
T KOG0531|consen 220 ISKLEGLNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLALSEAIS 296 (414)
T ss_pred ceeccCcccchhHHHHHHhcccCcccc-ccccccccccccccchhhccccccc--cccccchHHHhccCcchhcchhhhh
Confidence 874432211111137888999998873 3366777888999999999887443 345567788888888887632 2
Q ss_pred CCC-CCCCCCCCeEecCCCcccccCc
Q 035998 342 PTN-LPRCRKLKNINLARNNFSGQIP 366 (1020)
Q Consensus 342 p~~-l~~l~~L~~L~L~~N~l~~~~p 366 (1020)
... .+..+.++.+.+..|.+....+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 297 QEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ccccccccccccccccccCccccccc
Confidence 222 5667889999999998876554
No 480
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.98 E-value=3.6e-10 Score=111.13 Aligned_cols=107 Identities=21% Similarity=0.343 Sum_probs=31.6
Q ss_pred CCcceeeeccCccCCCCCccccccCCcccEEEccCCCCCCCCCCccccccccccccccccccccccchhh-hhhcccccc
Q 035998 156 PSIQVLDISSNSLNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEHLCLGMNDLTGGIADDI-FQLQKLRLL 234 (1020)
Q Consensus 156 ~~L~~L~Ls~N~l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L 234 (1020)
.++++|+|++|+|+ .|. .+...+.+|+.|+|++|.|+.. ..+..++.|++|++++|+|+. +.+.+ ..+++|++|
T Consensus 19 ~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 19 VKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQEL 93 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--EE
T ss_pred cccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCcCCEE
Confidence 34444444444443 221 1212334455555555555422 135566777777777777773 33334 356777777
Q ss_pred cccccccCCCC-CcccccCCCccEEEccCCcCcc
Q 035998 235 GLQDNQLSGKL-SPSIADLSNLVRLDVSSNNFSG 267 (1020)
Q Consensus 235 ~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~ 267 (1020)
+|++|+|...- -..+..+++|++|+|.+|.++.
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 77777776422 1455667777777777777763
No 481
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.97 E-value=4.1e-10 Score=110.72 Aligned_cols=110 Identities=34% Similarity=0.413 Sum_probs=31.5
Q ss_pred ccCCCCCcEEecCCCCCCCCCCcccc-CCCCCCeeeccCCCCCCCCCCccCCCCcceeeeccCccCCCCCccccccCCcc
Q 035998 105 LGNLVQLRFLNLSHNLLKGTVPVSLV-NLPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSNSLNGSVPTSICKNSSRI 183 (1020)
Q Consensus 105 l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~~L 183 (1020)
+.+...+++|+|++|.|+ .|. .++ .+.+|+.|||++|.|+.. +....+++|+.|++++|+|+ .++..+...+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l-~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL-EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNL 90 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---TT----TT--EEE--SS----S-CHHHHHH-TT-
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc-cCccChhhhhhcccCCCCCC-ccccchHHhCCcC
Confidence 344456777777777777 332 354 467777777777777743 33335677777777777776 4544333345666
Q ss_pred cEEEccCCCCCCCCC-Cccccccccccccccccccc
Q 035998 184 RVINLSVNYFSGTLS-PGLGNCASLEHLCLGMNDLT 218 (1020)
Q Consensus 184 ~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~ 218 (1020)
++|+|++|+|...-. ..++.+++|+.|+|.+|.++
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 666666666653211 23445566666666666655
No 482
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.96 E-value=4.7e-10 Score=126.23 Aligned_cols=243 Identities=20% Similarity=0.217 Sum_probs=171.0
Q ss_pred hccCCCcCCeeeccCCeEEEEEEe--CCCCEEEEEEecCCchhhHHH--HHHHHHHHHHc-CCCccceEeeEEeccCceE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATL--PDGRNVAIKRLSGDCGQMERE--FRAEVEALSRA-QHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 814 (1020)
...+|..+..||.|.|+.|+.... .++..|++|...........+ -..|+.+...+ .|.+++..+..+...++.|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 356789999999999999999864 367889999876554332222 23455555555 5889999888888888888
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCC-CCeEEeeccccc
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGN-FGAHLADFGLAR 893 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~ 893 (1020)
+--||+++++....... ...++...++.+..|++.++.++|+. .++|+|+||+||++..+ +.-++.|||...
T Consensus 343 ip~e~~~~~s~~l~~~~----~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVT----SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred CchhhhcCcchhhhhHH----HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccc
Confidence 99999999988766532 24567778899999999999999988 99999999999999886 778999999986
Q ss_pred cccCCCCcccccccccccCcc--CccccCCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCcccHHHHHHHHHhhccc
Q 035998 894 LILSPYDTHVTTDLVGTLGYI--PPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDMCKPKGSRDLISWVIRMRQENRE 971 (1020)
Q Consensus 894 ~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1020)
.+. .. .......-+++ +|+......+-.+.|+||||.-+.|..+|..--.. . ..|... +.+..
T Consensus 416 ~~~----~~-~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-~-------~~~~~i--~~~~~ 480 (524)
T KOG0601|consen 416 RLA----FS-SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-G-------VQSLTI--RSGDT 480 (524)
T ss_pred ccc----ee-cccccccccccccchhhccccccccccccccccccccccccCcccCcc-c-------ccceee--ecccc
Confidence 421 11 11112233444 55566677888999999999999999987643210 0 001000 00100
Q ss_pred ccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 035998 972 SEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQQLVS 1014 (1020)
Q Consensus 972 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1014 (1020)
+.. +.....+..+...+...++..||.+.+...
T Consensus 481 -----p~~-----~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~ 513 (524)
T KOG0601|consen 481 -----PNL-----PGLKLQLQVLLKVMINPDRKRRPSAVELSL 513 (524)
T ss_pred -----cCC-----CchHHhhhhhhhhhcCCccccchhhhhhcc
Confidence 000 111134667788899999999999988765
No 483
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.89 E-value=1.8e-09 Score=132.32 Aligned_cols=130 Identities=19% Similarity=0.269 Sum_probs=95.2
Q ss_pred CCCCCeeeccCCCCCCCCCCccCCCCcceeeeccCc--cCCCCCccccccCCcccEEEccCCCCCCCCCCcccccccccc
Q 035998 132 LPNLEVLDLSSNDLSGPLPQTINLPSIQVLDISSNS--LNGSVPTSICKNSSRIRVINLSVNYFSGTLSPGLGNCASLEH 209 (1020)
Q Consensus 132 l~~L~~L~L~~n~l~~~~p~~~~l~~L~~L~Ls~N~--l~~~ip~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 209 (1020)
....+...+-+|.+. .++.....++|++|-+..|. +. .++..+|..++.|++|||++|.=-+.+|..++++-+|++
T Consensus 522 ~~~~rr~s~~~~~~~-~~~~~~~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIE-HIAGSSENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchh-hccCCCCCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 356677777777765 34444556678888888886 43 777777788888888888887776778888888888888
Q ss_pred ccccccccccccchhhhhhcccccccccccccCCCCCcccccCCCccEEEccCCc
Q 035998 210 LCLGMNDLTGGIADDIFQLQKLRLLGLQDNQLSGKLSPSIADLSNLVRLDVSSNN 264 (1020)
Q Consensus 210 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 264 (1020)
|+|++..++ .+|..+..+++|.+|++..+.-...+|.....+++|++|.+..-.
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 888888877 677778888888888887776554556666667777777775554
No 484
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.88 E-value=1.6e-08 Score=101.26 Aligned_cols=126 Identities=24% Similarity=0.320 Sum_probs=83.3
Q ss_pred EEEEEEeCCCCEEEEEEecCCch--------------------------hhHHHHHHHHHHHHHcCCC--ccceEeeEEe
Q 035998 757 LVYRATLPDGRNVAIKRLSGDCG--------------------------QMEREFRAEVEALSRAQHP--NLVHLQGYCM 808 (1020)
Q Consensus 757 ~V~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 808 (1020)
.||.|...+|..+|||+...... .......+|++.|.++... ++.+++++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 48999988999999998853210 0123467899999999765 45666544
Q ss_pred ccCceEEEEEecc--CCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH-hHhcCCCCeEecCCCCCCEEEcCCCCeE
Q 035998 809 HKNDRLLIYSFME--NGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAY-LHQSCEPHILHRDIKSSNILLDGNFGAH 885 (1020)
Q Consensus 809 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~ivH~Dlkp~NIll~~~~~~k 885 (1020)
...++||||++ |..+.. +... .++.+....++.+++..+.. +|+. |+||||+.+.||+++++ .+.
T Consensus 79 --~~~~ivME~I~~~G~~~~~-l~~~-----~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPR-LKDV-----DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --ETTEEEEE--EETTEEGGC-HHHC-----GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred --eCCEEEEEecCCCccchhh-HHhc-----cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 24579999998 544433 3222 11123456777888886666 4677 99999999999999988 899
Q ss_pred Eeecccccccc
Q 035998 886 LADFGLARLIL 896 (1020)
Q Consensus 886 l~Dfg~~~~~~ 896 (1020)
++|||.+....
T Consensus 147 iIDf~qav~~~ 157 (188)
T PF01163_consen 147 IIDFGQAVDSS 157 (188)
T ss_dssp E--GTTEEETT
T ss_pred EEecCcceecC
Confidence 99999887653
No 485
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.86 E-value=5e-10 Score=131.94 Aligned_cols=251 Identities=21% Similarity=0.254 Sum_probs=167.3
Q ss_pred HhccCCCcCCeeeccCCeEEEEEEeC-CCCEEEEEEecCCc---hhhHHHHHHHHHHHHHcCCCccceEeeEEeccCceE
Q 035998 739 ESTNNFDQANIIGCGGFGLVYRATLP-DGRNVAIKRLSGDC---GQMEREFRAEVEALSRAQHPNLVHLQGYCMHKNDRL 814 (1020)
Q Consensus 739 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 814 (1020)
...+.+.+.+.+-.|.++.++.+.-. .|...+.|...... ....+...++-.+.-.-++|-++....-+.-....+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 34566788889999999999987632 34334444332221 111122233333322234566666555555667789
Q ss_pred EEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccc
Q 035998 815 LIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARL 894 (1020)
Q Consensus 815 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 894 (1020)
++++|..+++|...++.. ...+.+.+......+..+.+|||.. .+.|||++|.|.+...+++.+++|||....
T Consensus 881 L~~~~~~~~~~~Skl~~~----~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNS----GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSK 953 (1205)
T ss_pred hhhHHhccCCchhhhhcC----CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccc
Confidence 999999999998887754 2345455566666788999999988 799999999999999999999999984332
Q ss_pred ccCC-----------------------------CCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCC
Q 035998 895 ILSP-----------------------------YDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKR 945 (1020)
Q Consensus 895 ~~~~-----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~ 945 (1020)
.+.. ++........||+.|.+||...+......+|+|++|++++|.++|..
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 2100 00011234678999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 035998 946 PMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLSESPKVRPTTQ 1010 (1020)
Q Consensus 946 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1010 (1020)
||....+......+ .... .++ ...+........+++...+..+|.+|-.+.
T Consensus 1034 p~na~tpq~~f~ni-----~~~~-------~~~--p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1034 PFNAETPQQIFENI-----LNRD-------IPW--PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCcchhhhhhcc-----ccCC-------CCC--CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 99865543322111 0000 011 111222223466788888888998888765
No 486
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.83 E-value=3.3e-08 Score=100.95 Aligned_cols=149 Identities=21% Similarity=0.191 Sum_probs=107.4
Q ss_pred ccHHHHHHhccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCc----------------------hhhHHHHHHHH
Q 035998 732 ISIDDILESTNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDC----------------------GQMEREFRAEV 789 (1020)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~E~ 789 (1020)
+.+..+.+...-+.+...||-|.-+.||.|..++|.++|||.-..-. .......++|.
T Consensus 81 LAL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf 160 (304)
T COG0478 81 LALHALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREF 160 (304)
T ss_pred HHHHHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHH
Confidence 34444444444456789999999999999999999999999643110 01223467899
Q ss_pred HHHHHcCCC--ccceEeeEEeccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeE
Q 035998 790 EALSRAQHP--NLVHLQGYCMHKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHIL 867 (1020)
Q Consensus 790 ~~l~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 867 (1020)
++|.++... .+.+.+++ +...+||||++|--|... .++......++..|++-+..+-.. |+|
T Consensus 161 ~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~---------r~~~en~~~il~~il~~~~~~~~~---GiV 224 (304)
T COG0478 161 EALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRL---------RLDVENPDEILDKILEEVRKAYRR---GIV 224 (304)
T ss_pred HHHHHhhhcCCCCCCcccc----ccceeeeehcccceeecc---------cCcccCHHHHHHHHHHHHHHHHHc---Ccc
Confidence 999999644 66666553 567899999998654321 112344455666666666666666 999
Q ss_pred ecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 868 HRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 868 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|+|+.+-||++++||.+.++||--+....
T Consensus 225 HGDlSefNIlV~~dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 225 HGDLSEFNILVTEDGDIVVIDWPQAVPIS 253 (304)
T ss_pred ccCCchheEEEecCCCEEEEeCcccccCC
Confidence 99999999999999999999998776543
No 487
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.82 E-value=9.5e-08 Score=102.09 Aligned_cols=261 Identities=17% Similarity=0.173 Sum_probs=156.5
Q ss_pred CcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHHHHHHHHHHHHc-CCCccceEeeEE------eccCc-eEEE
Q 035998 745 DQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMEREFRAEVEALSRA-QHPNLVHLQGYC------MHKND-RLLI 816 (1020)
Q Consensus 745 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~------~~~~~-~~lv 816 (1020)
...+.+|+|+-+.+|-.- +-...+.|++.........+.. +.|.+. .||-+-.=+.|= -++.. .-+.
T Consensus 14 ~~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aqk~---a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 14 PPGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQKV---AELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCCccccCCccceeeecc--hhhchhheeecCCCchHHHHHH---HHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 456789999999999653 1123456887766543333222 223322 455433211111 11122 4467
Q ss_pred EEeccCC-Chhhhhh--hcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccc
Q 035998 817 YSFMENG-SLDYWLH--EKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLAR 893 (1020)
Q Consensus 817 ~e~~~~g-~L~~~l~--~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 893 (1020)
|+.+.+. -...+.. .++.+.....|+..+.+++.+|.+.+.||.. |.+-+|+.++|+|+.+++.+.+.|-..-.
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccccee
Confidence 7777654 1112211 2234556789999999999999999999999 99999999999999999999999865433
Q ss_pred cccCCCCcccccccccccCccCcccc-----CCCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCCC-----cccHHHHH
Q 035998 894 LILSPYDTHVTTDLVGTLGYIPPEYG-----QASVATYKGDVYSFGVVLLELLTG-KRPMDMCKPKG-----SRDLISWV 962 (1020)
Q Consensus 894 ~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGvil~elltg-~~pf~~~~~~~-----~~~~~~~~ 962 (1020)
.. .........+|...|.+||.- .+-..+...|.|.+|+++++++.| ++||.+..-.. .+..+...
T Consensus 166 i~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 166 IN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred ec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 32 122233346788999999953 344567789999999999999985 99997643211 11111111
Q ss_pred HHHHhh-cccccccCccccCccCHHHHHHHHHHHhhccCCC--CCCCCCHHHHHHHHHh
Q 035998 963 IRMRQE-NRESEVLDPFIYDKQHDKEMLRVLDIACLCLSES--PKVRPTTQQLVSWLDS 1018 (1020)
Q Consensus 963 ~~~~~~-~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~evl~~L~~ 1018 (1020)
...... ....-..-| ......--...+..+..+|+... +.-||+++..+..|.+
T Consensus 243 ~f~ya~~~~~g~~p~P--~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~a 299 (637)
T COG4248 243 RFAYASDQRRGLKPPP--RSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDA 299 (637)
T ss_pred eeeechhccCCCCCCC--CCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Confidence 111000 000000111 01111111224566777787543 5689999988876654
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.78 E-value=1.1e-07 Score=101.41 Aligned_cols=141 Identities=16% Similarity=0.107 Sum_probs=101.9
Q ss_pred CeeeccCCeEEEEEEeCCCCEEEEEEecCCchh-----------hHHHHHHHHHHHHHcCCCcc--ceEeeEEec-----
Q 035998 748 NIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ-----------MEREFRAEVEALSRAQHPNL--VHLQGYCMH----- 809 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~----- 809 (1020)
+.+-+.....|+++.+ +|+.|.||........ ....+.+|...+.++...+| ++++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4454444455777766 5788999987543211 11147789999988854443 344555543
Q ss_pred cCceEEEEEeccCC-ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcC-------C
Q 035998 810 KNDRLLIYSFMENG-SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDG-------N 881 (1020)
Q Consensus 810 ~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------~ 881 (1020)
....++|+|++++. +|.+++..... ...+...+..++.+++..+..||.. ||+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23468999999986 88888764321 2345667789999999999999999 9999999999999975 4
Q ss_pred CCeEEeecccccc
Q 035998 882 FGAHLADFGLARL 894 (1020)
Q Consensus 882 ~~~kl~Dfg~~~~ 894 (1020)
+.+.++||+.++.
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6799999998864
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.77 E-value=4.7e-09 Score=84.82 Aligned_cols=61 Identities=36% Similarity=0.539 Sum_probs=48.6
Q ss_pred CcceEEEecCCcceeccCccccCCCcccEEEccCCcccccCCccccccccccccccccccc
Q 035998 556 KKLHVFDLKHNNLSGPIPSELTGMTSLETLDLSYNNLSGAIPISLEKLSFLSKFSVANNHL 616 (1020)
Q Consensus 556 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~l~ls~N~l 616 (1020)
++|++|++++|+|+...+..|.++++|++|++++|++++..|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3678888888888855556788888888888888888877777888888888888888875
No 490
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.76 E-value=1.8e-07 Score=102.78 Aligned_cols=170 Identities=21% Similarity=0.263 Sum_probs=128.1
Q ss_pred CCeEEEEEEe-CCCCEEEEEEecCCchhhHHHHHHHHHHHHHcCCCccceEeeEEec----cCceEEEEEeccC-CChhh
Q 035998 754 GFGLVYRATL-PDGRNVAIKRLSGDCGQMEREFRAEVEALSRAQHPNLVHLQGYCMH----KNDRLLIYSFMEN-GSLDY 827 (1020)
Q Consensus 754 ~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-g~L~~ 827 (1020)
-..+.|++.. .||..|++|+++.+..........-+++++++.|+|+|++.++|.. +...++||+|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3457789874 4899999999976544333333456888999999999999998873 3467899999985 46655
Q ss_pred hhhhc-----------CCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 828 WLHEK-----------LDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 828 ~l~~~-----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
+-... ...+...++...|.++.|++.||.++|+. |+.-+-+.+++|+++++.+++|+..|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 43221 12334578899999999999999999999 99999999999999999999998888765543
Q ss_pred CCCCcccccccccccCccCccccCCCCCCchhhHHHHHHHHHHHHcCCC
Q 035998 897 SPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKR 945 (1020)
Q Consensus 897 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~ 945 (1020)
.+. . |.+.+ -.+-|.=.+|.++..+.||..
T Consensus 445 ~d~--------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDP--------------T--EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC--------------C--cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 221 0 11111 236788899999999999854
No 491
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.74 E-value=8.1e-09 Score=126.76 Aligned_cols=58 Identities=26% Similarity=0.305 Sum_probs=34.1
Q ss_pred CCCcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCccccc-CcccccCCCCCCeeeCC
Q 035998 324 LTNLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQ-IPETYKNFESLSYLSLS 381 (1020)
Q Consensus 324 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~ 381 (1020)
.++|+.|++...+....+.+....+..++.+-+..+.+.+. .-...+.++++..+.++
T Consensus 769 ~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~ 827 (889)
T KOG4658|consen 769 APHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLS 827 (889)
T ss_pred cCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccC
Confidence 47788888877776656666666666666666666666654 23333444444444443
No 492
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.69 E-value=1.2e-08 Score=82.44 Aligned_cols=59 Identities=36% Similarity=0.623 Sum_probs=35.9
Q ss_pred CcCEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCcccccCCCCCCeeeCCCCC
Q 035998 326 NLTSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIPETYKNFESLSYLSLSNSS 384 (1020)
Q Consensus 326 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 384 (1020)
+|++|++++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45566666666665445556666666666666666665555566666666666666665
No 493
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.60 E-value=3.1e-07 Score=105.89 Aligned_cols=140 Identities=22% Similarity=0.256 Sum_probs=96.5
Q ss_pred CeeeccCCeEEEEEEeCCCCEEEEEEecCCchh----------------------------------------hHHHHHH
Q 035998 748 NIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQ----------------------------------------MEREFRA 787 (1020)
Q Consensus 748 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------------------------~~~~~~~ 787 (1020)
+.|+.++-|.||+|++++|+.||||+.++.... .+-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 789999999999999999999999998653211 1113556
Q ss_pred HHHHHHHcC----CCccceEeeEEe-ccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHH-HHHhHhc
Q 035998 788 EVEALSRAQ----HPNLVHLQGYCM-HKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARG-LAYLHQS 861 (1020)
Q Consensus 788 E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~-L~~LH~~ 861 (1020)
|+..+.+++ ..--+++-.++. .....+++|||++|-.+.+...-.. ...+... ++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~---~g~d~k~---ia~~~~~~f~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS---AGIDRKE---LAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh---cCCCHHH---HHHHHHHHHHHHHHhc
Confidence 777666662 233344444444 4677899999999998877743321 2233222 22222222 2333334
Q ss_pred CCCCeEecCCCCCCEEEcCCCCeEEeecccccccc
Q 035998 862 CEPHILHRDIKSSNILLDGNFGAHLADFGLARLIL 896 (1020)
Q Consensus 862 ~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 896 (1020)
|+.|+|.+|.||+++.+|++.+.|||++....
T Consensus 285 ---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 285 ---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred ---CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 99999999999999999999999999987764
No 494
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.51 E-value=9.8e-08 Score=70.40 Aligned_cols=38 Identities=34% Similarity=0.825 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhccC----CCCCCCCCCCCCCCcCceEEcC
Q 035998 33 PNDLAALEDFMKNFESG----IDGWGTNASSSDCCHWVGITCN 71 (1020)
Q Consensus 33 ~~~~~aL~~~k~~~~~~----~~~~~~~~~~~~~C~w~gv~C~ 71 (1020)
++|++||++||+++..+ ..+|.... ..+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~-~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSS-DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT---S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcC-CCCCeeeccEEeC
Confidence 67999999999999853 35554321 3799999999995
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.51 E-value=1.3e-06 Score=87.85 Aligned_cols=139 Identities=15% Similarity=0.134 Sum_probs=103.2
Q ss_pred eeccCCeEEEEEEeCCCCEEEEEEecCCc------hhhHHHHHHHHHHHHHcCCCc--cceEeeEEe-c----cCceEEE
Q 035998 750 IGCGGFGLVYRATLPDGRNVAIKRLSGDC------GQMEREFRAEVEALSRAQHPN--LVHLQGYCM-H----KNDRLLI 816 (1020)
Q Consensus 750 lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~-~----~~~~~lv 816 (1020)
-|+|+.+.|+..... |+.+-+|+-.... +-.+..|.+|+..+.++...+ +.++. ++. . ....++|
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 477899999998874 4578888765211 224567999999999985333 44444 332 1 1235799
Q ss_pred EEeccC-CChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCC--eEEeeccccc
Q 035998 817 YSFMEN-GSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFG--AHLADFGLAR 893 (1020)
Q Consensus 817 ~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~~~ 893 (1020)
+|-+++ .+|.+++.+.. -...+...+..++.+++.+++-||+. |+.|+|+.+.||+++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~--~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA--VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCC--cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 997754 58888876542 22456777889999999999999999 9999999999999986667 9999998876
Q ss_pred cc
Q 035998 894 LI 895 (1020)
Q Consensus 894 ~~ 895 (1020)
..
T Consensus 179 ~~ 180 (216)
T PRK09902 179 RR 180 (216)
T ss_pred hh
Confidence 53
No 496
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.44 E-value=5.7e-08 Score=110.94 Aligned_cols=151 Identities=24% Similarity=0.267 Sum_probs=103.4
Q ss_pred HHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCCCeEEeeccccccccCCCCccc-------ccccccccCccCccccCC
Q 035998 849 QGAARGLAYLHQSCEPHILHRDIKSSNILLDGNFGAHLADFGLARLILSPYDTHV-------TTDLVGTLGYIPPEYGQA 921 (1020)
Q Consensus 849 ~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~ 921 (1020)
.+++.|+.|+|... ++||++|.|++|.++..+..|++.|+++.....+.+... ..-......|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34569999999874 899999999999999999999999999876544222111 111233467999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCcccHHHHHHHHHhhcccccccCccccCccCHHHHHHHHHHHhhccC
Q 035998 922 SVATYKGDVYSFGVVLLELLT-GKRPMDMCKPKGSRDLISWVIRMRQENRESEVLDPFIYDKQHDKEMLRVLDIACLCLS 1000 (1020)
Q Consensus 922 ~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~ 1000 (1020)
...+.++|+||+|+.+|.+.. |+.-+............ . .. +..-...+......++.+=+.+++.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~-----~-~~-------~~~~~~~~s~~~p~el~~~l~k~l~ 250 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS-----R-NL-------LNAGAFGYSNNLPSELRESLKKLLN 250 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh-----h-cc-------cccccccccccCcHHHHHHHHHHhc
Confidence 889999999999999999995 55555432221111110 0 00 0000011112333467888889999
Q ss_pred CCCCCCCCHHHHHH
Q 035998 1001 ESPKVRPTTQQLVS 1014 (1020)
Q Consensus 1001 ~dP~~RPs~~evl~ 1014 (1020)
.++.-||++.++..
T Consensus 251 ~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 251 GDSAVRPTLDLLLS 264 (700)
T ss_pred CCcccCcchhhhhc
Confidence 99999998777654
No 497
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.41 E-value=7.5e-09 Score=116.82 Aligned_cols=197 Identities=23% Similarity=0.230 Sum_probs=88.5
Q ss_pred CCcccEEEccCCCCCCCC-CCccccccccccccccccccccccchhhhhh-cccccccccccccC----------CCCCc
Q 035998 180 SSRIRVINLSVNYFSGTL-SPGLGNCASLEHLCLGMNDLTGGIADDIFQL-QKLRLLGLQDNQLS----------GKLSP 247 (1020)
Q Consensus 180 ~~~L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~----------~~~~~ 247 (1020)
++++++|.+-.-.=.+.. |-.+..+.+|++|.|.++.|.. ...+..+ .+|+.|.. +|.++ |.+..
T Consensus 83 lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~n 159 (1096)
T KOG1859|consen 83 LQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISN 159 (1096)
T ss_pred HhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhh-hccHHHHHHHHHHhcccccc
Confidence 444555554433222222 5556677788888888877763 2222222 23444422 22221 11111
Q ss_pred ccccCCCccEEEccCCcCcccCcccccCCcccceeecccccccccCCCCCcCCcccccccccccccccccccCCCCCCCc
Q 035998 248 SIADLSNLVRLDVSSNNFSGNIPDVFAGLGEFQYLVAHSNRFTGRIPHSLSNSPTLNLLNLRNNSLDGSLLLNCPALTNL 327 (1020)
Q Consensus 248 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 327 (1020)
++. ...|...+.++|.+. .....+.-++.|+.|+|++|+++... .+..+++|+.|||++|.+....-....++. |
T Consensus 160 s~~-Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L 234 (1096)
T KOG1859|consen 160 SPV-WNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-L 234 (1096)
T ss_pred chh-hhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-h
Confidence 111 124555555666555 33344444555555555555555332 445555555555555555533322222222 5
Q ss_pred CEEEcCCCccCCCCCCCCCCCCCCCeEecCCCcccccCc-ccccCCCCCCeeeCCCCCCc
Q 035998 328 TSLDLGTNKFNGPLPTNLPRCRKLKNINLARNNFSGQIP-ETYKNFESLSYLSLSNSSIY 386 (1020)
Q Consensus 328 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~i~ 386 (1020)
..|.|++|.++. -..+.++++|+.||+++|-|++.-- ..+..+..|+.|+|.+|++-
T Consensus 235 ~~L~lrnN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 235 QLLNLRNNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred eeeeecccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 555555555441 1123444555555555554443211 12233344444555555443
No 498
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.40 E-value=1.2e-07 Score=96.74 Aligned_cols=206 Identities=20% Similarity=0.214 Sum_probs=124.5
Q ss_pred cccccccccccccccccc-chhhh-hhcccccccccccccCC--CCCcccccCCCccEEEccCCcCcccCcccccCCccc
Q 035998 204 CASLEHLCLGMNDLTGGI-ADDIF-QLQKLRLLGLQDNQLSG--KLSPSIADLSNLVRLDVSSNNFSGNIPDVFAGLGEF 279 (1020)
Q Consensus 204 l~~L~~L~L~~N~l~~~~-~~~~~-~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 279 (1020)
+.-++-|.+.+..|...- ...|+ ..+.++.|||..|+|+. .+-.-+.+++.|++|+|++|++...+-..-..+.+|
T Consensus 44 ~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl 123 (418)
T KOG2982|consen 44 LRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNL 123 (418)
T ss_pred ccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccce
Confidence 334445555555554211 11122 34667777777777773 223345567788888888888775443322455677
Q ss_pred ceeeccccccccc-CCCCCcCCccccccccccccccccccc--CCC-CCCCcCEEEcCCC---------ccCCCCCCCCC
Q 035998 280 QYLVAHSNRFTGR-IPHSLSNSPTLNLLNLRNNSLDGSLLL--NCP-ALTNLTSLDLGTN---------KFNGPLPTNLP 346 (1020)
Q Consensus 280 ~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~--~~~-~l~~L~~L~L~~N---------~l~~~~p~~l~ 346 (1020)
+.|.|.+..+.-. ....+..+|.++.|++|.|++.....+ ... .-+.+.+|++..| ++...
T Consensus 124 ~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~------ 197 (418)
T KOG2982|consen 124 RVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI------ 197 (418)
T ss_pred EEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh------
Confidence 7777777665422 233456778888888888854422111 111 1123444444443 33322
Q ss_pred CCCCCCeEecCCCcccccC-cccccCCCCCCeeeCCCCCCcchhhHHHHHhhhcccchhhhhccccCCCCCC
Q 035998 347 RCRKLKNINLARNNFSGQI-PETYKNFESLSYLSLSNSSIYNLSSALQVLQQCRNLTTLVLTLNFRNEKLPT 417 (1020)
Q Consensus 347 ~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~i~~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~ 417 (1020)
++++..+-+..|++.... ...+..++.+..|+|+.|+|.+..+ ++.+.+++.|..|.++.+.+.+.+..
T Consensus 198 -Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswas-vD~Ln~f~~l~dlRv~~~Pl~d~l~~ 267 (418)
T KOG2982|consen 198 -FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWAS-VDALNGFPQLVDLRVSENPLSDPLRG 267 (418)
T ss_pred -cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHH-HHHHcCCchhheeeccCCcccccccC
Confidence 356777888888876433 3466778888899999999988754 56788888888888887766554443
No 499
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.38 E-value=1.6e-06 Score=89.53 Aligned_cols=106 Identities=25% Similarity=0.280 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHcCCCc--cceEeeEEeccC----ceEEEEEeccCC-ChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 035998 783 REFRAEVEALSRAQHPN--LVHLQGYCMHKN----DRLLIYSFMENG-SLDYWLHEKLDGPSSLDWDSRLHIAQGAARGL 855 (1020)
Q Consensus 783 ~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~----~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L 855 (1020)
....+|...+..+...+ +++.+++..... ..++|+|++++. +|.+++..... .+......++.+++..+
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARLI 131 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHHH
Confidence 35677888888875433 455666655432 347999999874 88888876421 45567789999999999
Q ss_pred HHhHhcCCCCeEecCCCCCCEEEcCCC---CeEEeeccccccc
Q 035998 856 AYLHQSCEPHILHRDIKSSNILLDGNF---GAHLADFGLARLI 895 (1020)
Q Consensus 856 ~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~~~~~ 895 (1020)
+-||+. ||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 132 ~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 132 AKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999 999999999999999887 8999999987753
No 500
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.37 E-value=5.4e-06 Score=83.67 Aligned_cols=138 Identities=16% Similarity=0.206 Sum_probs=94.3
Q ss_pred hccCCCcCCeeeccCCeEEEEEEeCCCCEEEEEEecCCchhhHHH---------HHHHHHHHHHcC---CCccceEeeEE
Q 035998 740 STNNFDQANIIGCGGFGLVYRATLPDGRNVAIKRLSGDCGQMERE---------FRAEVEALSRAQ---HPNLVHLQGYC 807 (1020)
Q Consensus 740 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~---h~niv~l~~~~ 807 (1020)
...+|...+++.......|.+... +|+.+++|.........++. ..+++..+.+++ ......++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 356788888888888888877776 57999999887654333332 233444444442 23333333333
Q ss_pred e-----ccCceEEEEEeccCCChhhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCCEEEcCCC
Q 035998 808 M-----HKNDRLLIYSFMENGSLDYWLHEKLDGPSSLDWDSRLHIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDGNF 882 (1020)
Q Consensus 808 ~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 882 (1020)
. .....+++|||++|..+.++.. ++. .++..+++++.-+|+. |+.|+|..|.|+++++++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~ 172 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG 172 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc
Confidence 2 2234568999999987655421 222 3456677889999999 999999999999999655
Q ss_pred CeEEeecccccc
Q 035998 883 GAHLADFGLARL 894 (1020)
Q Consensus 883 ~~kl~Dfg~~~~ 894 (1020)
+++.||+..+.
T Consensus 173 -i~iID~~~k~~ 183 (229)
T PF06176_consen 173 -IRIIDTQGKRM 183 (229)
T ss_pred -EEEEECccccc
Confidence 99999987653
Done!