BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036003
(558 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/540 (69%), Positives = 439/540 (81%), Gaps = 3/540 (0%)
Query: 19 TNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLL 78
NT N + L+ +C S R L QI A IK+H++ D++ + KLINFCT++PT SSM +A L
Sbjct: 27 VNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHL 85
Query: 79 FDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAE 138
F+ + EPDIV+FN+MARGYSR P+ LFVE+L G+LPD+Y+FPSLLKACA A+
Sbjct: 86 FEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV--AK 143
Query: 139 ALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIIT 198
ALEEG+QLHC ++KLGL+ N+YVC TLIN+Y EC DV++AR +F+ I EPCVV YNA+IT
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMIT 203
Query: 199 AYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDK 258
YAR +RPNEALSLFRE+Q + LKP ++T+LS LSSCALLGSLDLGKWIH+Y KK+ K
Sbjct: 204 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 263
Query: 259 YVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMM 318
YVKVNTALIDM AKCG LDDAVS+F+ M KDTQAWSAMIVAYA HG+ KS+LMFE M
Sbjct: 264 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 323
Query: 319 KAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRL 378
V PDEITFLGLL ACSHTG V+EG YF M K+GIVP IKHYG MVDLL RAG L
Sbjct: 324 SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNL 383
Query: 379 DEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLC 438
++AY FID+LPI TP+LWR LL++CSSHNNL LA++V ERIFELDDSHGGDYVILSNL
Sbjct: 384 EDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLY 443
Query: 439 ARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELV 498
AR +WE VD LRK+MKDR +KVPGCSSIEVNNVV EFFSGDGV S +T L +ALDE+V
Sbjct: 444 ARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 503
Query: 499 KELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
KELK+ GYVPDTS+V H +M D+EKEI LRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC
Sbjct: 504 KELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 563
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/570 (40%), Positives = 340/570 (59%), Gaps = 33/570 (5%)
Query: 20 NTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLF 79
N +S L RC+ LKQIHA +KT L D +TK ++FC + ++ + +A ++F
Sbjct: 13 NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 80 DRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEA 139
D PD L+N M RG+S S P R++ L+ +L S + Y+FPSLLKAC+ + A
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA-- 130
Query: 140 LEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITA 199
EE Q+H KLG +++Y +LIN YA + + A +F+ I EP VS+N++I
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 200 YARSSRPNEALSLFRELQERN-------------------------------LKPTDVTM 228
Y ++ + + AL+LFR++ E+N ++P +V++
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 229 LSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSG 288
+ALS+CA LG+L+ GKWIH Y+ K + + LIDM+AKCG +++A+ VF N+
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 289 KDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNY 348
K QAW+A+I YA HG G ++I F EM K + P+ ITF +L ACS+TGLV+EG
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 349 FYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHN 408
FYSM Y + P I+HYGC+VDLLGRAG LDEA RFI E+P+K ++W LL +C H
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 409 NLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSI 468
N+ L +++ E + +D HGG YV +N+ A +W+ R+LMK++GV KVPGCS+I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 469 EVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALR 528
+ EF +GD H +Q + ++L+ GYVP+ + ++D+E+E +
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 550
Query: 529 YHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
HSEKLAIT+GL+ T PGT IR++KNLRVC
Sbjct: 551 QHSEKLAITYGLIKTKPGTIIRIMKNLRVC 580
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 174/349 (49%), Gaps = 49/349 (14%)
Query: 17 LCTNTP-NAL---SLLPRCT---SFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTT 69
LC++ P NA SLL C+ +F QIHA K +ND+ + LIN T
Sbjct: 107 LCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLIN---SYAVT 163
Query: 70 SSMEHAHLLFDRIPEPDIVLFN-------------------------------TMARGYS 98
+ + AHLLFDRIPEPD V +N TM GY
Sbjct: 164 GNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYV 223
Query: 99 RSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSN 158
++ A+ LF E+ NS + PD+ S + L ACA +G ALE+GK +H + K + +
Sbjct: 224 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG--ALEQGKWIHSYLNKTRIRMD 281
Query: 159 LYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQE 218
+ LI++YA+C ++E A +F+NI + V ++ A+I+ YA EA+S F E+Q+
Sbjct: 282 SVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK 341
Query: 219 RNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKK-YGLDKYVKVNTALIDMHAKCGRLD 277
+KP +T + L++C+ G ++ GK I +++ Y L ++ ++D+ + G LD
Sbjct: 342 MGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLD 401
Query: 278 DAVSVFDNMSGK-DTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPD 325
+A M K + W A++ A HK+I + EE+ + ++ D
Sbjct: 402 EAKRFIQEMPLKPNAVIWGALLKACRI----HKNIELGEEIGEILIAID 446
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/531 (41%), Positives = 344/531 (64%), Gaps = 7/531 (1%)
Query: 32 TSFRGLKQIHAVTIKTHLQ-NDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEP-DIVL 89
+S L+QIHA +I+ + +D + LI + P+ M +AH +F +I +P ++ +
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 90 FNTMARGYSRSKTPIRAIFLFVELLNSGLL-PDDYSFPSLLKACACVGAEALEEGKQLHC 148
+NT+ RGY+ I A L+ E+ SGL+ PD +++P L+KA + L G+ +H
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRL--GETIHS 145
Query: 149 FAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNE 208
I+ G S +YV +L++LYA C DV +A ++F+ + E +V++N++I +A + +P E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 209 ALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALID 268
AL+L+ E+ + +KP T++S LS+CA +G+L LGK +H Y+ K GL + + + L+D
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 269 MHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQ-VSPDEI 327
++A+CGR+++A ++FD M K++ +W+++IV A +G G ++I +F+ M + + P EI
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 328 TFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDE 387
TF+G+LYACSH G+V EG+ YF MR++Y I P I+H+GCMVDLL RAG++ +AY +I
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 388 LPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDV 447
+P++ ++WRTLL +C+ H + LA+ +I +L+ +H GDYV+LSN+ A RW DV
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDV 445
Query: 448 DYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYV 507
+RK M GV KVPG S +EV N V EF GD H S + L E+ L+ GYV
Sbjct: 446 QKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 505
Query: 508 PDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
P S V + D+E+EEKE A+ YHSEK+AI F L++TP + I VVKNLRVC
Sbjct: 506 PQISNV-YVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 555
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/537 (40%), Positives = 333/537 (62%), Gaps = 10/537 (1%)
Query: 25 LSLLPRCTSFRGL---KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDR 81
+S+LP ++ R + K+IH +++ + +N+ T L++ + S+E A LFD
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK---CGSLETARQLFDG 296
Query: 82 IPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALE 141
+ E ++V +N+M Y +++ P A+ +F ++L+ G+ P D S L ACA +G LE
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD--LE 354
Query: 142 EGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYA 201
G+ +H +++LGL+ N+ V +LI++Y +C +V+ A +F + +VS+NA+I +A
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 202 RSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVK 261
++ RP +AL+ F +++ R +KP T +S +++ A L KWIH + + LDK V
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 262 VNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQ 321
V TAL+DM+AKCG + A +FD MS + W+AMI Y THG G ++ +FEEM K
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534
Query: 322 VSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEA 381
+ P+ +TFL ++ ACSH+GLV+ G FY M++ Y I + HYG MVDLLGRAGRL+EA
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
Query: 382 YRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARA 441
+ FI ++P+K ++ +L +C H N+ A++ ER+FEL+ GG +V+L+N+ A
Sbjct: 595 WDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAA 654
Query: 442 GRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKEL 501
WE V +R M +G+ K PGCS +E+ N V FFSG H S + L++L+ +
Sbjct: 655 SMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHI 714
Query: 502 KMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
K GYVPDT+LV +E++ KE L HSEKLAI+FGLLNT GTTI V KNLRVC
Sbjct: 715 KEAGYVPDTNLVL--GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVC 769
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 213/382 (55%), Gaps = 12/382 (3%)
Query: 22 PNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLIN-FCTQNPTTSSMEHAHLLFD 80
P AL LL RC+S + L+QI + K L + TKL++ FC S++ A +F+
Sbjct: 39 PAAL-LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY----GSVDEAARVFE 93
Query: 81 RIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEA- 139
I VL++TM +G+++ +A+ FV + + P Y+F LLK C G EA
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVC---GDEAE 150
Query: 140 LEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITA 199
L GK++H +K G + +L+ T L N+YA+C V AR++F+ + E +VS+N I+
Sbjct: 151 LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAG 210
Query: 200 YARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKY 259
Y+++ AL + + + E NLKP+ +T++S L + + L + +GK IH Y + G D
Sbjct: 211 YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 270
Query: 260 VKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMK 319
V ++TAL+DM+AKCG L+ A +FD M ++ +W++MI AY + +++L+F++M+
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 320 AQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLD 379
V P +++ +G L+AC+ G ++ G + + + + G+ + ++ + + +D
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 380 EAYRFIDELPIKSTPILWRTLL 401
A +L + T + W ++
Sbjct: 390 TAASMFGKLQSR-TLVSWNAMI 410
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 87/208 (41%), Gaps = 11/208 (5%)
Query: 216 LQERNLKPTDVTMLSA---LSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAK 272
L ERN P +V A L C+ L L + I + K GL + T L+ + +
Sbjct: 25 LSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 273 CGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGL 332
G +D+A VF+ + K + M+ +A K++ F M V P F L
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 333 LYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKS 392
L C + G + + K G + + ++ + +++EA + D +P +
Sbjct: 142 LKVCGDEAELRVG-KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 393 TPILWRTLLSSCSSHNNLGLAKQVIERI 420
+ W T+++ S + G+A+ +E +
Sbjct: 201 L-VSWNTIVAGYSQN---GMARMALEMV 224
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 329/538 (61%), Gaps = 14/538 (2%)
Query: 26 SLLPRCTSFRGLKQ---IHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRI 82
+LL +CT F+ L Q +HA +++ ++D+ + L+N + S+E A +F+++
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAK---CGSLEEARKVFEKM 121
Query: 83 PEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEE 142
P+ D V + T+ GYS+ P A+ F ++L G P++++ S++KA A
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC-- 179
Query: 143 GKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYAR 202
G QLH F +K G +SN++V + L++LY ++ A+ +F+ + VS+NA+I +AR
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 203 SSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKV 262
S +AL LF+ + +P+ + S +C+ G L+ GKW+H Y+ K G
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 263 NTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQV 322
L+DM+AK G + DA +FD ++ +D +W++++ AYA HG G +++ FEEM + +
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 323 SPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAY 382
P+EI+FL +L ACSH+GL+DEGW+Y Y + K GIVP HY +VDLLGRAG L+ A
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHY-YELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 383 RFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAG 442
RFI+E+PI+ T +W+ LL++C H N L E +FELD G +VIL N+ A G
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478
Query: 443 RWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELK 502
RW D +RK MK+ GV K P CS +E+ N + F + D H ++ + +E++ ++K
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538
Query: 503 MVGYVPDTS--LVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
+GYVPDTS +VH ++ +E+E+ L+YHSEK+A+ F LLNTPPG+TI + KN+RVC
Sbjct: 539 ELGYVPDTSHVIVH---VDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVC 593
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/530 (41%), Positives = 330/530 (62%), Gaps = 15/530 (2%)
Query: 38 KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGY 97
KQ H Q+D+ V + LI T +E A +FD IP+ +IV + +M RGY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALI---VMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 98 SRSKTPIRAIFLFVELL------NSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAI 151
+ + A+ LF +LL + + D S++ AC+ V A+ L E +H F I
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE--SIHSFVI 210
Query: 152 KLGLNSNLYVCTTLINLYAECSD--VEAARRIFENISEPCVVSYNAIITAYARSSRPNEA 209
K G + + V TL++ YA+ + V AR+IF+ I + VSYN+I++ YA+S NEA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 210 LSLFREL-QERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALID 268
+FR L + + + +T+ + L + + G+L +GK IH+ + + GL+ V V T++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 269 MHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEIT 328
M+ KCGR++ A FD M K+ ++W+AMI Y HG K++ +F M+ + V P+ IT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 329 FLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDEL 388
F+ +L ACSH GL EGW +F +M+ ++G+ PG++HYGCMVDLLGRAG L +AY I +
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 389 PIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVD 448
+K I+W +LL++C H N+ LA+ + R+FELD S+ G Y++LS++ A AGRW+DV+
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 449 YLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVP 508
+R +MK+RG++K PG S +E+N V F GD H + + L EL ++L GYV
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Query: 509 DTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
+TS V H D+++EEKE+ LR HSEKLAI FG++NT PG+T+ VVKNLRVC
Sbjct: 571 NTSSVCH-DVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVC 619
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 190/389 (48%), Gaps = 22/389 (5%)
Query: 53 LNVLTKLINFCTQNPTTSSMEHAH-----LLFDR-IPEPDIVLFNTMARGYSRSKTPIRA 106
+ V +K FC+ + + H LF+R + + D+ +N++ +RS A
Sbjct: 1 MKVRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEA 60
Query: 107 IFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLI 166
+ F + L P SFP +KAC+ + + GKQ H A G S+++V + LI
Sbjct: 61 LLAFSSMRKLSLYPTRSSFPCAIKACSSLFD--IFSGKQTHQQAFVFGYQSDIFVSSALI 118
Query: 167 NLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDV 226
+Y+ C +E AR++F+ I + +VS+ ++I Y + +A+SLF++L D
Sbjct: 119 VMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDA 178
Query: 227 TML------SALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAV 280
L S +S+C+ + + L + IH ++ K G D+ V V L+D +AK G AV
Sbjct: 179 MFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAV 238
Query: 281 S--VFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQ-VSPDEITFLGLLYACS 337
+ +FD + KD ++++++ YA G +++ +F ++K + V+ + IT +L A S
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 338 HTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILW 397
H+G + G + + G+ + ++D+ + GR++ A + D + K+ W
Sbjct: 299 HSGALRIG-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS-W 356
Query: 398 RTLLSSCSSHNNLGLAKQVIERIFELDDS 426
+++ H G A + +E + DS
Sbjct: 357 TAMIAGYGMH---GHAAKALELFPAMIDS 382
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/567 (38%), Positives = 334/567 (58%), Gaps = 33/567 (5%)
Query: 22 PNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQN--------------- 66
P L + +F+ +QIH +K DL V T LI+ QN
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 67 -------------PTTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVEL 113
+ +E+A LFD IP D+V +N M GY+ + A+ LF ++
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 114 LNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECS 173
+ + + PD+ + +++ ACA G+ +E G+Q+H + G SNL + LI+LY++C
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGS--IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 174 DVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALS 233
++E A +FE + V+S+N +I Y + EAL LF+E+ P DVTMLS L
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 234 SCALLGSLDLGKWIHEYIKKY--GLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDT 291
+CA LG++D+G+WIH YI K G+ + T+LIDM+AKCG ++ A VF+++ K
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 292 QAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYS 351
+W+AMI +A HG+ S +F M K + PD+ITF+GLL ACSH+G++D G + F +
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495
Query: 352 MRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLG 411
M Y + P ++HYGCM+DLLG +G EA I+ + ++ ++W +LL +C H N+
Sbjct: 496 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 555
Query: 412 LAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVN 471
L + E + +++ + G YV+LSN+ A AGRW +V R L+ D+G+ KVPGCSSIE++
Sbjct: 556 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Query: 472 NVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHS 531
+VV EF GD H + ++ L+E+ L+ G+VPDTS V +ME+E KE ALR+HS
Sbjct: 616 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ-EMEEEWKEGALRHHS 674
Query: 532 EKLAITFGLLNTPPGTTIRVVKNLRVC 558
EKLAI FGL++T PGT + +VKNLRVC
Sbjct: 675 EKLAIAFGLISTKPGTKLTIVKNLRVC 701
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 261/471 (55%), Gaps = 43/471 (9%)
Query: 8 PITQSPPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNP 67
P + PP N P +LSLL C + + L+ IHA IK L N L+KLI FC +P
Sbjct: 21 PSSSDPPYDSIRNHP-SLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 79
Query: 68 TTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPS 127
+ +A +F I EP+++++NTM RG++ S P+ A+ L+V +++ GLLP+ Y+FP
Sbjct: 80 HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 139
Query: 128 LLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSD------------- 174
+LK+CA ++A +EG+Q+H +KLG + +LYV T+LI++Y +
Sbjct: 140 VLKSCA--KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 175 ------------------VEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFREL 216
+E A+++F+ I VVS+NA+I+ YA + EAL LF+++
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 217 QERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRL 276
+ N++P + TM++ +S+CA GS++LG+ +H +I +G +K+ ALID+++KCG L
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 277 DDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYAC 336
+ A +F+ + KD +W+ +I Y +++L+F+EM+++ +P+++T L +L AC
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377
Query: 337 SHTGLVDEG-WNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPI 395
+H G +D G W + Y + G+ ++D+ + G ++ A++ + + KS
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437
Query: 396 LWRTLLSSCSSHNNLGLAKQVIERIFEL----DDSHGGDYVILSNLCARAG 442
W ++ + H + + R+ ++ DD +V L + C+ +G
Sbjct: 438 -WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI---TFVGLLSACSHSG 484
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/593 (37%), Positives = 347/593 (58%), Gaps = 51/593 (8%)
Query: 1 MATTPSPPITQSPPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLI 60
++TT + PP KL L+ + S + QIHA ++ +L L+ ++
Sbjct: 16 LSTTATARFRLPPPEKLAV-------LIDKSQSVDEVLQIHAAILRHNLL--LHPRYPVL 66
Query: 61 NFCTQNPTTS--SMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGL 118
N S + H+ LF + +PD+ LF S + +A L+V+LL+S +
Sbjct: 67 NLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEI 126
Query: 119 LPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSD---- 174
P++++F SLLK+C+ + GK +H +K GL + YV T L+++YA+ D
Sbjct: 127 NPNEFTFSSLLKSCST------KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSA 180
Query: 175 ---------------------------VEAARRIFENISEPCVVSYNAIITAYARSSRPN 207
VEAAR +F+++ E +VS+N +I YA+ PN
Sbjct: 181 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPN 240
Query: 208 EALSLFRE-LQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTAL 266
+AL LF++ L E KP ++T+++ALS+C+ +G+L+ G+WIH ++K + VKV T L
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 267 IDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMK-AQVSPD 325
IDM++KCG L++AV VF++ KD AW+AMI YA HG ++ +F EM + P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 326 EITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFI 385
+ITF+G L AC+H GLV+EG F SM +YGI P I+HYGC+V LLGRAG+L AY I
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 386 DELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWE 445
+ + + +LW ++L SC H + L K++ E + L+ + G YV+LSN+ A G +E
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYE 480
Query: 446 DVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVG 505
V +R LMK++G++K PG S+IE+ N V EF +GD HS S ++ L ++ + +K G
Sbjct: 481 GVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHG 540
Query: 506 YVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
YVP+T+ V D+E+ EKE +L+ HSE+LAI +GL++T PG+ +++ KNLRVC
Sbjct: 541 YVPNTNTVLQ-DLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVC 592
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/553 (37%), Positives = 335/553 (60%), Gaps = 37/553 (6%)
Query: 38 KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGY 97
+ +H + +K+ + +D+ V LI+ C + ++ A +F I E D+V +N+M G+
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIH-CYF--SCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 98 SRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNS 157
+ +P +A+ LF ++ + + + +L ACA + LE G+Q+ + + +N
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQVCSYIEENRVNV 265
Query: 158 NLYVCTTLINLYAECSDVEAARRIFENISEPC---------------------------- 189
NL + ++++Y +C +E A+R+F+ + E
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 190 ---VVSYNAIITAYARSSRPNEALSLFRELQ-ERNLKPTDVTMLSALSSCALLGSLDLGK 245
+V++NA+I+AY ++ +PNEAL +F ELQ ++N+K +T++S LS+CA +G+L+LG+
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 246 WIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHG 305
WIH YIKK+G+ V +ALI M++KCG L+ + VF+++ +D WSAMI A HG
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 306 QGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHY 365
G++++ MF +M +A V P+ +TF + ACSHTGLVDE + F+ M YGIVP KHY
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505
Query: 366 GCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDD 425
C+VD+LGR+G L++A +FI+ +PI + +W LL +C H NL LA+ R+ EL+
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEP 565
Query: 426 SHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHS 485
+ G +V+LSN+ A+ G+WE+V LRK M+ G+ K PGCSSIE++ ++ EF SGD H
Sbjct: 566 RNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625
Query: 486 YSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPP 545
S + L E++++LK GY P+ S V E+E KE +L HSEKLAI +GL++T
Sbjct: 626 MSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEA 685
Query: 546 GTTIRVVKNLRVC 558
IRV+KNLRVC
Sbjct: 686 PKVIRVIKNLRVC 698
Score = 212 bits (539), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 245/451 (54%), Gaps = 43/451 (9%)
Query: 12 SPPPKLCTNTPNA--LSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTT 69
S P + TN + +SL+ RC S R LKQ H I+T +D +KL + +
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALS-SF 77
Query: 70 SSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLN-SGLLPDDYSFPSL 128
+S+E+A +FD IP+P+ +NT+ R Y+ P+ +I+ F+++++ S P+ Y+FP L
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 129 LKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEP 188
+KA A V + +L G+ LH A+K + S+++V +LI+ Y C D+++A ++F I E
Sbjct: 138 IKAAAEVSSLSL--GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 189 CVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIH 248
VVS+N++I + + P++AL LF++++ ++K + VTM+ LS+CA + +L+ G+ +
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 249 EYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFD------------------------ 284
YI++ ++ + + A++DM+ KCG ++DA +FD
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 285 -------NMSGKDTQAWSAMIVAYATHGQGHKSILMFEEM-MKAQVSPDEITFLGLLYAC 336
+M KD AW+A+I AY +G+ ++++++F E+ ++ + ++IT + L AC
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 337 SHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPIL 396
+ G ++ G + +S K+GI ++ + + G L+++ + + K +
Sbjct: 376 AQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFV 433
Query: 397 WRTLLSSCSSHNNLGLAKQVIERIFELDDSH 427
W ++ + H G + ++ +++ +++
Sbjct: 434 WSAMIGGLAMH---GCGNEAVDMFYKMQEAN 461
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/547 (36%), Positives = 330/547 (60%), Gaps = 11/547 (2%)
Query: 16 KLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHA 75
K+ N+ +++ + L+Q+HA I T ++LTKLI + ++ +
Sbjct: 4 KVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLAC---SARAIAYT 60
Query: 76 HLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACV 135
HLLF +P PD LFN++ + S+ + P+ + + +L+S + P +Y+F S++K+CA +
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADL 120
Query: 136 GAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNA 195
AL GK +HC A+ G + YV L+ Y++C D+E AR++F+ + E +V++N+
Sbjct: 121 --SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNS 178
Query: 196 IITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYG 255
+++ + ++ +EA+ +F +++E +P T +S LS+CA G++ LG W+H+YI G
Sbjct: 179 LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 256 LDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFE 315
LD VK+ TALI+++++CG + A VFD M + AW+AMI AY THG G +++ +F
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 316 EMM-KAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGR 374
+M P+ +TF+ +L AC+H GLV+EG + + M Y ++PG++H+ CMVD+LGR
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGR 358
Query: 375 AGRLDEAYRFIDELPI---KSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDY 431
AG LDEAY+FI +L + P LW +L +C H N L ++ +R+ L+ + G +
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHH 418
Query: 432 VILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQ 491
V+LSN+ A +G+ ++V ++R M + K G S IEV N F GD H + ++
Sbjct: 419 VMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIY 478
Query: 492 KALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRV 551
+ L+ L+ K +GY P + V H +E+EEKE ALRYHSEKLA+ FGLL T I +
Sbjct: 479 RYLETLISRCKEIGYAPVSEEVMH-QVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITI 536
Query: 552 VKNLRVC 558
VKNLR+C
Sbjct: 537 VKNLRIC 543
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/483 (39%), Positives = 313/483 (64%), Gaps = 7/483 (1%)
Query: 78 LFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGA 137
+F+ +P D+V +NT+ GY++S A+ + E+ + L PD ++ S+L + +
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP----IFS 253
Query: 138 EALE--EGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNA 195
E ++ +GK++H + I+ G++S++Y+ ++L+++YA+ + +E + R+F + +S+N+
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS 313
Query: 196 IITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYG 255
++ Y ++ R NEAL LFR++ +KP V S + +CA L +L LGK +H Y+ + G
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 256 LDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFE 315
+ + +AL+DM++KCG + A +FD M+ D +W+A+I+ +A HG GH+++ +FE
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 316 EMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRA 375
EM + V P+++ F+ +L ACSH GLVDE W YF SM YG+ ++HY + DLLGRA
Sbjct: 434 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 493
Query: 376 GRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILS 435
G+L+EAY FI ++ ++ T +W TLLSSCS H NL LA++V E+IF +D + G YV++
Sbjct: 494 GKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMC 553
Query: 436 NLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALD 495
N+ A GRW+++ LR M+ +G+ K P CS IE+ N F SGD H + + L
Sbjct: 554 NMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLK 613
Query: 496 ELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNL 555
++++++ GYV DTS V H D+++E K L HSE+LA+ FG++NT PGTTIRV KN+
Sbjct: 614 AVMEQMEKEGYVADTSGVLH-DVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNI 672
Query: 556 RVC 558
R+C
Sbjct: 673 RIC 675
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 174/349 (49%), Gaps = 41/349 (11%)
Query: 79 FDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAE 138
F + P ++ + ++ R ++ +A+ FVE+ SG PD FPS+LK+C +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM--M 119
Query: 139 ALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAEC-------------------------S 173
L G+ +H F ++LG++ +LY L+N+YA+
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 174 DVEA-----------ARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLK 222
DV+A RR+FE + VVSYN II YA+S +AL + RE+ +LK
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 223 PTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSV 282
P T+ S L + + GK IH Y+ + G+D V + ++L+DM+AK R++D+ V
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 283 FDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLV 342
F + +D +W++++ Y +G+ ++++ +F +M+ A+V P + F ++ AC+H +
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 343 DEGWN-YFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPI 390
G + Y +R +G I +VD+ + G + A + D + +
Sbjct: 360 HLGKQLHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 156/269 (57%), Gaps = 7/269 (2%)
Query: 38 KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGY 97
K+IH I+ + +D+ + + L++ + ++ +E + +F R+ D + +N++ GY
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAK---SARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 98 SRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNS 157
++ A+ LF +++ + + P +F S++ ACA + L GKQLH + ++ G S
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA--TLHLGKQLHGYVLRGGFGS 376
Query: 158 NLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQ 217
N+++ + L+++Y++C +++AAR+IF+ ++ VS+ AII +A +EA+SLF E++
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 218 ERNLKPTDVTMLSALSSCALLGSLDLG-KWIHEYIKKYGLDKYVKVNTALIDMHAKCGRL 276
+ +KP V ++ L++C+ +G +D + + K YGL++ ++ A+ D+ + G+L
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 277 DDAVSVFDNMSGKDT-QAWSAMIVAYATH 304
++A + M + T WS ++ + + H
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 41/298 (13%)
Query: 142 EGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYA 201
+ KQLH I+ S+ + +I++Y + A +F+ + P V+++ ++I +
Sbjct: 23 QAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 202 RSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVK 261
S ++AL+ F E++ P S L SC ++ L G+ +H +I + G+D +
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 262 VNTALIDMHAKCGRLDDAVS------------------------------------VFDN 285
AL++M+AK + +S VF+
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 286 MSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEG 345
M KD +++ +I YA G ++ M EM + PD T +L S V +G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 346 WN-YFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLS 402
+ Y +R GI + +VD+ ++ R++++ R L + I W +L++
Sbjct: 262 KEIHGYVIRK--GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD-GISWNSLVA 316
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/577 (36%), Positives = 334/577 (57%), Gaps = 52/577 (9%)
Query: 31 CTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFC-TQNPTTSSMEHAHLLFDRIPEPDIVL 89
C + R L QIHAV IK+ D +++ FC T + +++AH +F+++P+ +
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 90 FNTMARGYSRSK--TPIRAIFLFVELLNSGLL-PDDYSFPSLLKACACVGAEALEEGKQL 146
+NT+ RG+S S + AI LF E+++ + P+ ++FPS+LKACA G ++EGKQ+
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK--IQEGKQI 150
Query: 147 HCFAIKLGLNSNLYVCTTLINLYAECS--------------------------------- 173
H A+K G + +V + L+ +Y C
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 174 ------------DVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNL 221
D +AAR +F+ + + VVS+N +I+ Y+ + +A+ +FRE+++ ++
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 222 KPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVS 281
+P VT++S L + + LGSL+LG+W+H Y + G+ + +ALIDM++KCG ++ A+
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 282 VFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGL 341
VF+ + ++ WSAMI +A HGQ +I F +M +A V P ++ ++ LL ACSH GL
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
Query: 342 VDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLL 401
V+EG YF M G+ P I+HYGCMVDLLGR+G LDEA FI +PIK ++W+ LL
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Query: 402 SSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLK 461
+C N+ + K+V + ++ G YV LSN+ A G W +V +R MK++ + K
Sbjct: 451 GACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510
Query: 462 VPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDE 521
PGCS I+++ V+ EF D H + ++ L E+ +L++ GY P T+ V ++E+E
Sbjct: 511 DPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLL-NLEEE 569
Query: 522 EKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
+KE L YHSEK+A FGL++T PG IR+VKNLR+C
Sbjct: 570 DKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRIC 606
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/487 (38%), Positives = 302/487 (62%), Gaps = 8/487 (1%)
Query: 72 MEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKA 131
+ AH LFD++P+ +++ + TM YS+ K +A+ L V +L + P+ Y++ S+L++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 132 CACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVV 191
C + + + LHC IK GL S+++V + LI+++A+ + E A +F+ + +
Sbjct: 172 C-----NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 192 SYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYI 251
+N+II +A++SR + AL LF+ ++ T+ S L +C L L+LG H +I
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 252 KKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSI 311
KY D+ + +N AL+DM+ KCG L+DA+ VF+ M +D WS MI A +G +++
Sbjct: 287 VKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 312 LMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDL 371
+FE M + P+ IT +G+L+ACSH GL+++GW YF SM+ YGI P +HYGCM+DL
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 372 LGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDY 431
LG+AG+LD+A + ++E+ + + WRTLL +C N+ LA+ +++ LD G Y
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTY 464
Query: 432 VILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQ 491
+LSN+ A + +W+ V+ +R M+DRG+ K PGCS IEVN + F GD H ++
Sbjct: 465 TLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVS 524
Query: 492 KALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRV 551
K L++L+ L +GYVP+T+ V D+E E+ E +LR+HSEKLA+ FGL+ P IR+
Sbjct: 525 KKLNQLIHRLTGIGYVPETNFVLQ-DLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRI 583
Query: 552 VKNLRVC 558
KNLR+C
Sbjct: 584 RKNLRIC 590
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 180/360 (50%), Gaps = 26/360 (7%)
Query: 105 RAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKL-GLNSNLYVCT 163
RA+ L + GL D ++ L+K C + A+ EG L C + G +++
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCC--ISNRAVHEG-NLICRHLYFNGHRPMMFLVN 100
Query: 164 TLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKP 223
LIN+Y + + + A ++F+ + + V+S+ +I+AY++ +AL L + N++P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 224 TDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVF 283
T S L SC + + + +H I K GL+ V V +ALID+ AK G +DA+SVF
Sbjct: 161 NVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 284 DNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVD 343
D M D W+++I +A + + ++ +F+ M +A ++ T +L AC+ L++
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 344 EGWNYFYSMRDKYGIVPGIKHY---GCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTL 400
G M+ IV + +VD+ + G L++A R +++ + I W T+
Sbjct: 278 LG------MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDV-ITWSTM 330
Query: 401 LSSCSSHNNLGLAKQVIERIFELDDSHGG--DYVILSNL---CARAGRWEDVDYLRKLMK 455
+S + + G +++ + ++FE S G +Y+ + + C+ AG ED Y + MK
Sbjct: 331 ISGLAQN---GYSQEAL-KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 45/225 (20%)
Query: 26 SLLPRCTSFRGLK---QIHAVTIKTHLQNDLNVLTKLIN-FCTQNPTTSSMEHAHLLFDR 81
S+L CT L+ Q H +K DL + L++ +C S+E A +F++
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCK----CGSLEDALRVFNQ 318
Query: 82 IPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALE 141
+ E D++ ++TM G +++ A+ LF + +SG P+ + +L AC+ G LE
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG--LLE 376
Query: 142 EGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYA 201
+G Y ++ LY +P Y +I
Sbjct: 377 DG---------------WYYFRSMKKLYG---------------IDPVREHYGCMIDLLG 406
Query: 202 RSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKW 246
++ + ++A+ L E++ +P VT + L +C + ++ L ++
Sbjct: 407 KAGKLDDAVKLLNEME---CEPDAVTWRTLLGACRVQRNMVLAEY 448
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 327/572 (57%), Gaps = 20/572 (3%)
Query: 4 TPSPPITQSPPPKLCTNTPNAL-SLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINF 62
+P P SP N + SL C+ LKQ+HA T++T + L
Sbjct: 30 SPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKI 89
Query: 63 CTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKT-PIRAIFLFVELLNSG-LLP 120
+ + S + +A +FD I ++NT+ R + + A L+ ++L G P
Sbjct: 90 LQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSP 149
Query: 121 DDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARR 180
D ++FP +LKACA + EGKQ+HC +K G ++YV LI+LY C ++ AR+
Sbjct: 150 DKHTFPFVLKACAYIFG--FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARK 207
Query: 181 IFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGS 240
+F+ + E +VS+N++I A R + AL LFRE+Q R+ +P TM S LS+CA LGS
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGS 266
Query: 241 LDLGKWIHEYI-KKYGLDKY--VKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAM 297
L LG W H ++ +K +D V V +LI+M+ KCG L A VF M +D +W+AM
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326
Query: 298 IVAYATHGQGHKSILMFEEMM--KAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDK 355
I+ +ATHG+ +++ F+ M+ + V P+ +TF+GLL AC+H G V++G YF M
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 356 YGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSC-----SSHNNL 410
Y I P ++HYGC+VDL+ RAG + EA + +P+K ++WR+LL +C S +
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Query: 411 GLAKQVIERIFELDDSHG---GDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSS 467
+A+ +I + + S+G G YV+LS + A A RW DV +RKLM + G+ K PGCSS
Sbjct: 447 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 506
Query: 468 IEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGD-MEDEEKEIA 526
IE+N + EFF+GD H + + + L + L+ +GY+PD S D D KE +
Sbjct: 507 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYS 566
Query: 527 LRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
LR HSE+LAI FGL+N PP T IR+ KNLRVC
Sbjct: 567 LRLHSERLAIAFGLINLPPQTPIRIFKNLRVC 598
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/503 (39%), Positives = 305/503 (60%), Gaps = 19/503 (3%)
Query: 72 MEHAHLLFDRIPEP----DIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPS 127
E A LF+++ E D+V ++ GY++ A+ + ++L+SG+ P++ + S
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 128 LLKACACVGAEALEEGKQLHCFAIKL-------GLNSNLYVCTTLINLYAECSDVEAARR 180
+L CA VGA L GK++HC+AIK G V LI++YA+C V+ AR
Sbjct: 371 VLSGCASVGA--LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 181 IFENIS--EPCVVSYNAIITAYARSSRPNEALSLFRELQERNL--KPTDVTMLSALSSCA 236
+F+++S E VV++ +I Y++ N+AL L E+ E + +P T+ AL +CA
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 237 LLGSLDLGKWIHEYIKKYGLDKY-VKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWS 295
L +L +GK IH Y + + + V+ LIDM+AKCG + DA VFDNM K+ W+
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 296 AMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDK 355
+++ Y HG G +++ +F+EM + D +T L +LYACSH+G++D+G YF M+
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608
Query: 356 YGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQ 415
+G+ PG +HY C+VDLLGRAGRL+ A R I+E+P++ P++W LS C H + L +
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY 668
Query: 416 VIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVR 475
E+I EL +H G Y +LSNL A AGRW+DV +R LM+ +GV K PGCS +E
Sbjct: 669 AAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728
Query: 476 EFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLA 535
FF GD H ++ ++ + L + ++ +K +GYVP+T H D++DEEK+ L HSEKLA
Sbjct: 729 TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALH-DVDDEEKDDLLFEHSEKLA 787
Query: 536 ITFGLLNTPPGTTIRVVKNLRVC 558
+ +G+L TP G IR+ KNLRVC
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVC 810
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 220/468 (47%), Gaps = 67/468 (14%)
Query: 3 TTPSPPITQSPPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINF 62
+T +P IT PP + +C + +K IH + + LN+ + LI
Sbjct: 24 STSAPEIT---PP-----------FIHKCKTISQVKLIHQKLLSFGILT-LNLTSHLI-- 66
Query: 63 CTQNPTTSSMEHAHLLFDRIPEPD--IVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLP 120
+ + + HA L R P D + +N++ R Y + + ++LF + + P
Sbjct: 67 -STYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP 125
Query: 121 DDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARR 180
D+Y+FP + KAC + ++ G+ H ++ G SN++V L+ +Y+ C + AR+
Sbjct: 126 DNYTFPFVFKACGEI--SSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 181 IFENISEPCVVSYNAIITAYARSSRPNEALSLF-RELQERNLKPTDVTMLSALSSCALLG 239
+F+ +S VVS+N+II +YA+ +P AL +F R E +P ++T+++ L CA LG
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 240 SLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIV 299
+ LGK +H + + + + V L+DM+AKCG +D+A +VF NMS KD +W+AM+
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 300 AYATHGQGHKSILMFE-----------------------------------EMMKAQVSP 324
Y+ G+ ++ +FE +M+ + + P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 325 DEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYG-------CMVDLLGRAGR 377
+E+T + +L C+ G + G + KY I +G ++D+ + +
Sbjct: 364 NEVTLISVLSGCASVGALMHG-KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 378 LDEAYRFIDEL-PIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELD 424
+D A D L P + + W ++ S H + A +++ +FE D
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 116/306 (37%), Gaps = 53/306 (17%)
Query: 18 CTNTPNALSL---LPRCTSFRGL---KQIHAVTIKTHLQNDLNVLTKLINFCTQN--PTT 69
C PNA ++ L C S L KQIHA L+N N + ++ C +
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYA----LRNQQNAVPLFVSNCLIDMYAKC 526
Query: 70 SSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLL 129
S+ A L+FD + + V + ++ GY A+ +F E+ G D + +L
Sbjct: 527 GSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVL 586
Query: 130 KACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPC 189
AC+ G +++G + + +F P
Sbjct: 587 YACSHSG--MIDQGMEY----------------------------FNRMKTVFG--VSPG 614
Query: 190 VVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHE 249
Y ++ R+ R N AL L E+ ++P V ++ LS C + G ++LG++ E
Sbjct: 615 PEHYACLVDLLGRAGRLNAALRLIEEMP---MEPPPVVWVAFLSCCRIHGKVELGEYAAE 671
Query: 250 YIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQ-----AWSAMIVAYATH 304
I + + T L +++A GR D + M K + +W I T
Sbjct: 672 KITELA-SNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTF 730
Query: 305 GQGHKS 310
G K+
Sbjct: 731 FVGDKT 736
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 13/205 (6%)
Query: 245 KWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQA--WSAMIVAYA 302
K IH+ + +G+ + + + LI + G L AVS+ D W+++I +Y
Sbjct: 45 KLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 303 THGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGI 362
+G +K + +F M +PD TF + AC V G +++ G + +
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCG-ESAHALSLVTGFISNV 162
Query: 363 KHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFE 422
+V + R L +A + DE+ + + W +++ S+ LG K +E
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVWDV-VSWNSII---ESYAKLGKPKVALEMFSR 218
Query: 423 LDDSHG--GDYVILSNL---CARAG 442
+ + G D + L N+ CA G
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLG 243
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/546 (37%), Positives = 319/546 (58%), Gaps = 14/546 (2%)
Query: 18 CT--NTPNALSLLPRCTSFRGLK---QIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSM 72
CT +T L +LP + L+ QIH++ KT + VLT I+ ++ +
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK---CGKI 272
Query: 73 EHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKAC 132
+ LF +PDIV +N M GY+ + ++ LF EL+ SG + SL+
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332
Query: 133 ACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVS 192
L +H + +K S+ V T L +Y++ +++E+AR++F+ E + S
Sbjct: 333 G-----HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 193 YNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIK 252
+NA+I+ Y ++ +A+SLFRE+Q+ P VT+ LS+CA LG+L LGKW+H+ ++
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 253 KYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSIL 312
+ + V+TALI M+AKCG + +A +FD M+ K+ W+ MI Y HGQG +++
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 507
Query: 313 MFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLL 372
+F EM+ + ++P +TFL +LYACSH GLV EG F SM +YG P +KHY CMVD+L
Sbjct: 508 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567
Query: 373 GRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYV 432
GRAG L A +FI+ + I+ +W TLL +C H + LA+ V E++FELD + G +V
Sbjct: 568 GRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHV 627
Query: 433 ILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQK 492
+LSN+ + + +R+ K R + K PG + IE+ F SGD H ++ +
Sbjct: 628 LLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYE 687
Query: 493 ALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVV 552
L++L +++ GY P+T L H D+E+EE+E+ ++ HSE+LAI FGL+ T PGT IR++
Sbjct: 688 KLEKLEGKMREAGYQPETELALH-DVEEEERELMVKVHSERLAIAFGLIATEPGTEIRII 746
Query: 553 KNLRVC 558
KNLRVC
Sbjct: 747 KNLRVC 752
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 196/425 (46%), Gaps = 17/425 (4%)
Query: 4 TPSPPITQSPPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFC 63
T S ++ + NT L R TS L Q HA I +ND+++LTKL
Sbjct: 5 TVSSATAETTAALISKNT--YLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRL 62
Query: 64 TQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNS-GLLPDD 122
+ ++ +A +F + PD+ LFN + RG+S +++P ++ +F L S L P+
Sbjct: 63 SD---LGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNS 119
Query: 123 YSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIF 182
++ + A + G G+ +H A+ G +S L + + ++ +Y + VE AR++F
Sbjct: 120 STYAFAISAAS--GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 183 ENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTD-VTMLSALSSCALLGSL 241
+ + E + +N +I+ Y ++ E++ +FR+L + D T+L L + A L L
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 242 DLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAY 301
LG IH K G + V T I +++KCG++ ++F D A++AMI Y
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 302 ATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPG 361
++G+ S+ +F+E+M + T + L+ H L+ Y K +
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCL----KSNFLSH 353
Query: 362 IKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIF 421
+ + + ++ A + DE P KS P W ++S + + GL + I
Sbjct: 354 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPS-WNAMISGYTQN---GLTEDAISLFR 409
Query: 422 ELDDS 426
E+ S
Sbjct: 410 EMQKS 414
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 311/538 (57%), Gaps = 5/538 (0%)
Query: 25 LSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPE 84
LSL+ T L+QIHA+ ++T L + +V ++ + + ++ +F +
Sbjct: 15 LSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLN 74
Query: 85 PDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGK 144
P + NTM R +S S+TP LF L + LP + S C C+ + L G
Sbjct: 75 PTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKC-CIKSGDLLGGL 133
Query: 145 QLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSS 204
Q+H G S+ + TTL++LY+ C + A ++F+ I + VS+N + + Y R+
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 205 RPNEALSLFRELQ---ERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVK 261
R + L LF +++ + +KP VT L AL +CA LG+LD GK +H++I + GL +
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 262 VNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQ 321
++ L+ M+++CG +D A VF M ++ +W+A+I A +G G ++I F EM+K
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 322 VSPDEITFLGLLYACSHTGLVDEGWNYFYSMRD-KYGIVPGIKHYGCMVDLLGRAGRLDE 380
+SP+E T GLL ACSH+GLV EG +F MR ++ I P + HYGC+VDLLGRA LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373
Query: 381 AYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCAR 440
AY I + +K +WRTLL +C H ++ L ++VI + EL GDYV+L N +
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433
Query: 441 AGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKE 500
G+WE V LR LMK++ + PGCS+IE+ V EF D H ++ K L E+ ++
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493
Query: 501 LKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
LK+ GYV + + H +EEK ALRYHSEKLAI FG+L TPPGTTIRV KNLR C
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTC 551
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 313/537 (58%), Gaps = 6/537 (1%)
Query: 22 PNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDR 81
P L R +S + +H++ +K +D+ +T L++ + + + AH LFD
Sbjct: 115 PLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYS---GSGRLNDAHKLFDE 171
Query: 82 IPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALE 141
IP+ +V + + GY+ S AI LF +++ G+ PD Y +L AC VG L+
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD--LD 229
Query: 142 EGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYA 201
G+ + + ++ + N +V TTL+NLYA+C +E AR +F+++ E +V+++ +I YA
Sbjct: 230 SGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA 289
Query: 202 RSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVK 261
+S P E + LF ++ + NLKP +++ LSSCA LG+LDLG+W I ++ +
Sbjct: 290 SNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF 349
Query: 262 VNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQ 321
+ ALIDM+AKCG + VF M KD +A I A +G S +F + K
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 322 VSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEA 381
+SPD TFLGLL C H GL+ +G +F ++ Y + ++HYGCMVDL GRAG LD+A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 382 YRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARA 441
YR I ++P++ I+W LLS C + LA+ V++ + L+ + G+YV LSN+ +
Sbjct: 470 YRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVG 529
Query: 442 GRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKEL 501
GRW++ +R +M +G+ K+PG S IE+ V EF + D H S + L++L E+
Sbjct: 530 GRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
Query: 502 KMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
+++G+VP T V D+E+EEKE L YHSEKLA+ GL++T G IRVVKNLRVC
Sbjct: 590 RLMGFVPTTEFVFF-DVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVC 645
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 224/436 (51%), Gaps = 14/436 (3%)
Query: 15 PKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQND---LNVLTKLINFCTQNPTTSS 71
P + +L+ + LKQIH I HL +D +N+L K F Q
Sbjct: 7 PSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQT----- 61
Query: 72 MEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKA 131
++++LLF P+I L+N++ G+ + + LF+ + GL ++FP +LKA
Sbjct: 62 -KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 132 CACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVV 191
C + L G LH +K G N ++ T+L+++Y+ + A ++F+ I + VV
Sbjct: 121 CTRASSRKL--GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV 178
Query: 192 SYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYI 251
++ A+ + Y S R EA+ LF+++ E +KP ++ LS+C +G LD G+WI +Y+
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 252 KKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSI 311
++ + K V T L++++AKCG+++ A SVFD+M KD WS MI YA++ + I
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 312 LMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDL 371
+F +M++ + PD+ + +G L +C+ G +D G + S+ D++ + + ++D+
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDM 357
Query: 372 LGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDS-HGGD 430
+ G + + E+ K I+ +S + + ++ L+ V + +L S G
Sbjct: 358 YAKCGAMARGFEVFKEMKEKDIVIM-NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416
Query: 431 YVILSNLCARAGRWED 446
++ L C AG +D
Sbjct: 417 FLGLLCGCVHAGLIQD 432
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/544 (37%), Positives = 323/544 (59%), Gaps = 11/544 (2%)
Query: 20 NTPNALSLLPRCTS---FRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAH 76
++ +SLL CT F IH+ +IK L+++L V KLI+ + +
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE---FGRLRDCQ 302
Query: 77 LLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVG 136
+FDR+ D++ +N++ + Y ++ P+RAI LF E+ S + PD + SL + +G
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 137 AEALEEGKQLHCFAIKLG-LNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNA 195
+ + + F ++ G ++ + ++ +YA+ V++AR +F + V+S+N
Sbjct: 363 D--IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 196 IITAYARSSRPNEALSLFRELQERN-LKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKY 254
II+ YA++ +EA+ ++ ++E + T +S L +C+ G+L G +H + K
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 255 GLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMF 314
GL V V T+L DM+ KCGRL+DA+S+F + ++ W+ +I + HG G K++++F
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 315 EEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGR 374
+EM+ V PD ITF+ LL ACSH+GLVDEG F M+ YGI P +KHYGCMVD+ GR
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 375 AGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVIL 434
AG+L+ A +FI + ++ +W LLS+C H N+ L K E +FE++ H G +V+L
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 660
Query: 435 SNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKAL 494
SN+ A AG+WE VD +R + +G+ K PG SS+EV+N V F++G+ H ++ + L
Sbjct: 661 SNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYREL 720
Query: 495 DELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKN 554
L +LKM+GYVPD V D+ED+EKE L HSE+LAI F L+ TP TTIR+ KN
Sbjct: 721 TALQAKLKMIGYVPDHRFVLQ-DVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 779
Query: 555 LRVC 558
LRVC
Sbjct: 780 LRVC 783
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 227/449 (50%), Gaps = 44/449 (9%)
Query: 26 SLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEP 85
+L CT+ + K +HA + + ++ + KL+N + H FD I
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHT---FDHIQNR 115
Query: 86 DIVLFNTMARGYSR---SKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEE 142
D+ +N M GY R S IR LF +L+SGL PD +FPS+LKAC V +
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTV-----ID 168
Query: 143 GKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYAR 202
G ++HC A+K G ++YV +LI+LY+ V AR +F+ + + S+NA+I+ Y +
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 203 SSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKV 262
S EAL+L L+ + VT++S LS+C G + G IH Y K+GL+ + V
Sbjct: 229 SGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 263 NTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQV 322
+ LID++A+ GRL D VFD M +D +W+++I AY + Q ++I +F+EM +++
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 323 SPDEITFLGLLYACSHTGLVD-----EGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGR 377
PD +T + L S G + +G +++R + + I +V + + G
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQG----FTLRKGW-FLEDITIGNAVVVMYAKLGL 399
Query: 378 LDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHG------GDY 431
+D A + LP + I W T++S + + G A + IE ++ + + G G +
Sbjct: 400 VDSARAVFNWLP-NTDVISWNTIISGYAQN---GFASEAIE-MYNIMEEEGEIAANQGTW 454
Query: 432 VILSNLCARAGRWEDVDYLRKLMKDRGVL 460
V + C++AG LR+ MK G L
Sbjct: 455 VSVLPACSQAGA------LRQGMKLHGRL 477
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 321/551 (58%), Gaps = 25/551 (4%)
Query: 26 SLLPRCTSFRGL---KQIHAVTIKT-HLQNDLNVLTKLIN-FCTQNPTTSSMEHAHLLFD 80
S+LP C+ L K++HA +K L + V + L++ +C S +FD
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 81 RIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNS-GLLPDDYSFPSLLKACACVGAEA 139
R I L+N M GYS+++ A+ LF+ + S GLL + + ++ AC GA +
Sbjct: 367 R----KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 140 LEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITA 199
+E +H F +K GL+ + +V TL+++Y+ ++ A RIF + + +V++N +IT
Sbjct: 423 RKEA--IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 200 YARSSRPNEALSLFRELQ--ER---------NLKPTDVTMLSALSSCALLGSLDLGKWIH 248
Y S +AL L ++Q ER +LKP +T+++ L SCA L +L GK IH
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 249 EYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGH 308
Y K L V V +AL+DM+AKCG L + VFD + K+ W+ +I+AY HG G
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 309 KSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCM 368
++I + MM V P+E+TF+ + ACSH+G+VDEG FY M+ YG+ P HY C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 369 VDLLGRAGRLDEAYRFIDELPIK-STPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSH 427
VDLLGRAGR+ EAY+ ++ +P + W +LL + HNNL + + + + +L+ +
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 428 GGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYS 487
YV+L+N+ + AG W+ +R+ MK++GV K PGCS IE + V +F +GD H S
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 780
Query: 488 TDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGT 547
L L+ L + ++ GYVPDTS V H ++E++EKEI L HSEKLAI FG+LNT PGT
Sbjct: 781 EKLSGYLETLWERMRKEGYVPDTSCVLH-NVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839
Query: 548 TIRVVKNLRVC 558
IRV KNLRVC
Sbjct: 840 IIRVAKNLRVC 850
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 150/270 (55%), Gaps = 13/270 (4%)
Query: 81 RIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEAL 140
R PE I L R RS A+ +V+++ G+ PD+Y+FP+LLKA A + + +
Sbjct: 60 RSPEWWIDLL----RSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADL--QDM 113
Query: 141 EEGKQLHCFAIKLGLN-SNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITA 199
E GKQ+H K G ++ V TL+NLY +C D A ++F+ ISE VS+N++I++
Sbjct: 114 ELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS 173
Query: 200 YARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALL---GSLDLGKWIHEY-IKKYG 255
+ AL FR + + N++P+ T++S +++C+ L L +GK +H Y ++K
Sbjct: 174 LCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE 233
Query: 256 LDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFE 315
L+ ++ +NT L+ M+ K G+L + + + G+D W+ ++ + + Q +++
Sbjct: 234 LNSFI-INT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 316 EMMKAQVSPDEITFLGLLYACSHTGLVDEG 345
EM+ V PDE T +L ACSH ++ G
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 180/370 (48%), Gaps = 12/370 (3%)
Query: 38 KQIHAVTIKTHLQND-LNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARG 96
KQIHA K D + V L+N + + +FDRI E + V +N++
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRK---CGDFGAVYKVFDRISERNQVSWNSLISS 173
Query: 97 YSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGA-EALEEGKQLHCFAIKLG- 154
+ A+ F +L+ + P ++ S++ AC+ + E L GKQ+H + ++ G
Sbjct: 174 LCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE 233
Query: 155 LNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFR 214
LNS ++ TL+ +Y + + +++ + + +V++N ++++ ++ + EAL R
Sbjct: 234 LNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 215 ELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYG-LDKYVKVNTALIDMHAKC 273
E+ ++P + T+ S L +C+ L L GK +H Y K G LD+ V +AL+DM+ C
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 274 GRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMK-AQVSPDEITFLGL 332
++ VFD M + W+AMI Y+ + +++L+F M + A + + T G+
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 333 LYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKS 392
+ AC +G + K G+ ++D+ R G++D A R ++ +
Sbjct: 412 VPACVRSGAFSRK-EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470
Query: 393 TPILWRTLLS 402
+ W T+++
Sbjct: 471 L-VTWNTMIT 479
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/562 (36%), Positives = 310/562 (55%), Gaps = 44/562 (7%)
Query: 34 FRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTM 93
F G+ ++H V K D V T F + + +A +FD + D+V +NTM
Sbjct: 128 FEGM-ELHGVAFKIATLCDPFVET---GFMDMYASCGRINYARNVFDEMSHRDVVTWNTM 183
Query: 94 ARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKL 153
Y R A LF E+ +S ++PD+ +++ AC G + + ++ F I+
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN--MRYNRAIYEFLIEN 241
Query: 154 GLN-------------------------------SNLYVCTTLINLYAECSDVEAARRIF 182
+ NL+V T +++ Y++C ++ A+ IF
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 183 ENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLD 242
+ + +V + +I+AY S P EAL +F E+ +KP V+M S +S+CA LG LD
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 243 LGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYA 302
KW+H I GL+ + +N ALI+M+AKCG LD VF+ M ++ +WS+MI A +
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 303 THGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGI 362
HG+ ++ +F M + V P+E+TF+G+LY CSH+GLV+EG F SM D+Y I P +
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 363 KHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFE 422
+HYGCMVDL GRA L EA I+ +P+ S ++W +L+S+C H L L K +RI E
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 423 LDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDG 482
L+ H G V++SN+ AR RWEDV +R++M+++ V K G S I+ N EF GD
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601
Query: 483 VHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLN 542
H S ++ LDE+V +LK+ GYVPD V D+E+EEK+ + +HSEKLA+ FGL+N
Sbjct: 602 RHKQSNEIYAKLDEVVSKLKLAGYVPDCGSV-LVDVEEEEKKDLVLWHSEKLALCFGLMN 660
Query: 543 TPPGT------TIRVVKNLRVC 558
IR+VKNLRVC
Sbjct: 661 EEKEEEKDSCGVIRIVKNLRVC 682
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 213/440 (48%), Gaps = 39/440 (8%)
Query: 13 PPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSM 72
PPP T L L C S +KQ+HA ++T + + LN + + + ++ ++
Sbjct: 4 PPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLN---SFLFNLSVSSSSINL 60
Query: 73 EHAHLLFDRIPEP-DIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKA 131
+A +F IP P + ++FN R SRS P I + + + G D +SF +LKA
Sbjct: 61 SYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKA 120
Query: 132 CACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVV 191
+ V A L EG +LH A K+ + +V T +++YA C + AR +F+ +S VV
Sbjct: 121 VSKVSA--LFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVV 178
Query: 192 SYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYI 251
++N +I Y R +EA LF E+++ N+ P ++ + + +S+C G++ + I+E++
Sbjct: 179 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238
Query: 252 KKYGLDKYVKVNTALIDMHA-------------------------------KCGRLDDAV 280
+ + + TAL+ M+A KCGRLDDA
Sbjct: 239 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQ 298
Query: 281 SVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTG 340
+FD KD W+ MI AY +++ +FEEM + + PD ++ ++ AC++ G
Sbjct: 299 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 358
Query: 341 LVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTL 400
++D+ + +S G+ + ++++ + G LD +++P ++ + W ++
Sbjct: 359 ILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV-VSWSSM 416
Query: 401 LSSCSSHNNLGLAKQVIERI 420
+++ S H A + R+
Sbjct: 417 INALSMHGEASDALSLFARM 436
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/572 (35%), Positives = 328/572 (57%), Gaps = 45/572 (7%)
Query: 24 ALSLLPRCTSFRGLKQIHA-VTIKTHLQNDLNVLTKLINFCTQNPTTSS---MEHAHLLF 79
A++LL +F+ ++QIHA + + L++D L+ + S +++A+ +
Sbjct: 9 AIALLDSGITFKEVRQIHAKLYVDGTLKDD-----HLVGHFVKAVALSDHKYLDYANQIL 63
Query: 80 DRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSG--LLPDDYSFPSLLKACACVGA 137
DR +P + N+M R + +S P ++ + +L+SG L PD+Y+ L++AC G
Sbjct: 64 DRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC--TGL 121
Query: 138 EALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAE-------------------------- 171
E G Q+H I+ G +++ +V T LI+LYAE
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 172 -----CSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDV 226
C DV AR++FE + E +++NA+I+ YA+ EAL++F +Q +K V
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 227 TMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNM 286
M+S LS+C LG+LD G+W H YI++ + V++ T L+D++AKCG ++ A+ VF M
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 287 SGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGW 346
K+ WS+ + A +G G K + +F M + V+P+ +TF+ +L CS G VDEG
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 347 NYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSS 406
+F SMR+++GI P ++HYGC+VDL RAGRL++A I ++P+K +W +LL +
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM 421
Query: 407 HNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCS 466
+ NL L +++ EL+ ++ G YV+LSN+ A + W++V ++R+ MK +GV K PGCS
Sbjct: 422 YKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Query: 467 SIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIA 526
+EVN V EFF GD H T + ++ + L++ GY DT+ V D+++EEKE A
Sbjct: 482 VMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMF-DIDEEEKEDA 540
Query: 527 LRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
L HSEK AI FG+++ IR+VKNLRVC
Sbjct: 541 LCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVC 572
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 313/522 (59%), Gaps = 7/522 (1%)
Query: 38 KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGY 97
+Q+HA+++ T D +V ++++F +++ + +LFD +PE D V +N + Y
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKH---DRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 98 SRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNS 157
S++ ++ F E+ G ++ F ++L A + + L+ G+QLHC A+ +S
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS--LQMGRQLHCQALLATADS 384
Query: 158 NLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQ 217
L+V +L+++YA+C E A IF+++ + VS+ A+I+ Y + L LF +++
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 218 ERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLD 277
NL+ T + L + A SL LGK +H +I + G + V + L+DM+AKCG +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 278 DAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACS 337
DAV VF+ M ++ +W+A+I A+A +G G +I F +M+++ + PD ++ LG+L ACS
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 338 HTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILW 397
H G V++G YF +M YGI P KHY CM+DLLGR GR EA + +DE+P + I+W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 398 RTLLSSCSSHNNLGLAKQVIERIFELDD-SHGGDYVILSNLCARAGRWEDVDYLRKLMKD 456
++L++C H N LA++ E++F ++ YV +SN+ A AG WE V ++K M++
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Query: 457 RGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHG 516
RG+ KVP S +EVN+ + F S D H ++ + ++EL E++ GY PDTS V
Sbjct: 685 RGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQ- 743
Query: 517 DMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
D++++ K +L+YHSE+LA+ F L++TP G I V+KNLR C
Sbjct: 744 DVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRAC 785
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 201/411 (48%), Gaps = 22/411 (5%)
Query: 26 SLLPRCTSF---RGLKQIHAVTIKTHLQND-----LNVLTKLINFCTQNPTTSSMEHAHL 77
+LLP C + Q+HA +K + NVL K ++C ++ A +
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLK--SYCE----VRRLDLACV 205
Query: 78 LFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGA 137
LF+ IPE D V FNT+ GY + +I LF+++ SG P D++F +LKA VG
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGL 263
Query: 138 EALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAII 197
G+QLH ++ G + + V +++ Y++ V R +F+ + E VSYN +I
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 198 TAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLD 257
++Y+++ + +L FRE+Q + + LS A L SL +G+ +H D
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 258 KYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEM 317
+ V +L+DM+AKC ++A +F ++ + T +W+A+I Y G + +F +M
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Query: 318 MKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGR 377
+ + D+ TF +L A + + G ++ + G + + +VD+ + G
Sbjct: 444 RGSNLRADQSTFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGS 502
Query: 378 LDEAYRFIDELPIKSTPILWRTLLSSCSSHNN----LGLAKQVIERIFELD 424
+ +A + +E+P ++ + W L+S+ + + + +G ++IE + D
Sbjct: 503 IKDAVQVFEEMPDRNA-VSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 152/340 (44%), Gaps = 12/340 (3%)
Query: 69 TSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSG--LLPDDYSFP 126
T + A LFD +P+ +V + + Y+R+ A LF ++ S LPD +F
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 127 SLLKACA-CVGAEALEEGKQLHCFAIKLGLNSN--LYVCTTLINLYAECSDVEAARRIFE 183
+LL C V A+ Q+H FA+KLG ++N L V L+ Y E ++ A +FE
Sbjct: 152 TLLPGCNDAVPQNAV---GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 184 NISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDL 243
I E V++N +IT Y + E++ LF ++++ +P+D T L + L L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 244 GKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYAT 303
G+ +H G + V ++D ++K R+ + +FD M D +++ +I +Y+
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 304 HGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIK 363
Q S+ F EM F +L ++ + G + I
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ--LHCQALLATADSIL 386
Query: 364 HYG-CMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLS 402
H G +VD+ + +EA LP ++T + W L+S
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTT-VSWTALIS 425
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 7/239 (2%)
Query: 156 NSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRE 215
+ N T+I+ + + DV +AR +F+ + + VV++ ++ YAR+S +EA LFR+
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 216 LQERN--LKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDK--YVKVNTALIDMHA 271
+ + P VT + L C + +H + K G D ++ V+ L+ +
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 272 KCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLG 331
+ RLD A +F+ + KD+ ++ +I Y G +SI +F +M ++ P + TF G
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 332 LLYACSHTGLVDEGW-NYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELP 389
+L A GL D +++ G ++D + R+ E DE+P
Sbjct: 256 VLKAV--VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/570 (34%), Positives = 333/570 (58%), Gaps = 39/570 (6%)
Query: 25 LSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFC----TQNPTTSSMEHAHLLFD 80
L+LL C+SF LK IH ++THL +D+ V ++L+ C T N T+ + +A+ +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 81 RIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEAL 140
+I P++ +FN + R +S P +A + ++L S + PD+ +FP L+KA + + E +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM--ECV 133
Query: 141 EEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAY 200
G+Q H ++ G +++YV +L+++YA C + AA RIF + VVS+ +++ Y
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 201 ARSSRPNEALSLFRELQERNL-----------------KPTDV--------------TML 229
+ A +F E+ RNL K D+ M+
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 230 SALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGK 289
S +SSCA LG+L+ G+ +EY+ K + + + TAL+DM +CG ++ A+ VF+ +
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 290 DTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYF 349
D+ +WS++I A HG HK++ F +M+ P ++TF +L ACSH GLV++G +
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 350 YSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNN 409
+M+ +GI P ++HYGC+VD+LGRAG+L EA FI ++ +K + LL +C + N
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 410 LGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIE 469
+A++V + ++ H G YV+LSN+ A AG+W+ ++ LR +MK++ V K PG S IE
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Query: 470 VNNVVREFFSGDGV-HSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALR 528
++ + +F GD H +++ +E++ +++++GY +T D+++EEKE ++
Sbjct: 494 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFF-DVDEEEKESSIH 552
Query: 529 YHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
HSEKLAI +G++ T PGTTIR+VKNLRVC
Sbjct: 553 MHSEKLAIAYGMMKTKPGTTIRIVKNLRVC 582
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/536 (36%), Positives = 314/536 (58%), Gaps = 5/536 (0%)
Query: 25 LSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTK-LINFCTQNPTTSSMEHAHLLFDRIP 83
L LL RC + KQ+HA IK L + ++ C + +SM +A +F I
Sbjct: 34 LYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGID 93
Query: 84 EPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEG 143
+P FNTM RGY + A+ + E++ G PD++++P LLKAC + +++ EG
Sbjct: 94 DPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRL--KSIREG 151
Query: 144 KQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARS 203
KQ+H KLGL ++++V +LIN+Y C ++E + +FE + S++++++A A
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGM 211
Query: 204 SRPNEALSLFREL-QERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKV 262
+E L LFR + E NLK + M+SAL +CA G+L+LG IH ++ + + + V
Sbjct: 212 GMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIV 271
Query: 263 NTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQV 322
T+L+DM+ KCG LD A+ +F M ++ +SAMI A HG+G ++ MF +M+K +
Sbjct: 272 QTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL 331
Query: 323 SPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAY 382
PD + ++ +L ACSH+GLV EG F M + + P +HYGC+VDLLGRAG L+EA
Sbjct: 332 EPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEAL 391
Query: 383 RFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAG 442
I +PI+ ++WRT LS C N+ L + + + +L + GDY+++SNL ++
Sbjct: 392 ETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQ 451
Query: 443 RWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELK 502
W+DV R + +G+ + PG S +E+ F S D H ++ K L ++ +LK
Sbjct: 452 MWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLK 511
Query: 503 MVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
GY PD + + ++++EEK+ L+ HS+K+AI FGLL TPPG+ I++ +NLR+C
Sbjct: 512 FEGYSPDLTQILL-NVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMC 566
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 127/267 (47%), Gaps = 7/267 (2%)
Query: 22 PNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDR 81
P L R S R KQIH K L+ D+ V LIN + ME + +F++
Sbjct: 136 PCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGR---CGEMELSSAVFEK 192
Query: 82 IPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLN-SGLLPDDYSFPSLLKACACVGAEAL 140
+ +++M + + LF + + + L ++ S L ACA G AL
Sbjct: 193 LESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTG--AL 250
Query: 141 EEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAY 200
G +H F ++ N+ V T+L+++Y +C ++ A IF+ + + ++Y+A+I+
Sbjct: 251 NLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGL 310
Query: 201 ARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIH-EYIKKYGLDKY 259
A AL +F ++ + L+P V +S L++C+ G + G+ + E +K+ ++
Sbjct: 311 ALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPT 370
Query: 260 VKVNTALIDMHAKCGRLDDAVSVFDNM 286
+ L+D+ + G L++A+ ++
Sbjct: 371 AEHYGCLVDLLGRAGLLEEALETIQSI 397
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 309/524 (58%), Gaps = 11/524 (2%)
Query: 38 KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGY 97
+ +H++ +K + L++ ++ ++ A +F + + +V + +M GY
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSK---CGDLDSAKAVFREMSDRSVVSYTSMIAGY 372
Query: 98 SRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNS 157
+R A+ LF E+ G+ PD Y+ ++L CA L+EGK++H + + L
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA--RYRLLDEGKRVHEWIKENDLGF 430
Query: 158 NLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFREL- 216
+++V L+++YA+C ++ A +F + ++S+N II Y+++ NEALSLF L
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 217 QERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRL 276
+E+ P + T+ L +CA L + D G+ IH YI + G V +L+DM+AKCG L
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 277 DDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYAC 336
A +FD+++ KD +W+ MI Y HG G ++I +F +M +A + DEI+F+ LLYAC
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 337 SHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPIL 396
SH+GLVDEGW +F MR + I P ++HY C+VD+L R G L +AYRFI+ +PI +
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 397 WRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKD 456
W LL C H+++ LA++V E++FEL+ + G YV+++N+ A A +WE V LRK +
Sbjct: 671 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730
Query: 457 RGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDT--SLVH 514
RG+ K PGCS IE+ V F +GD + + +++ L ++ + GY P T +L+
Sbjct: 731 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALI- 789
Query: 515 HGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
D E+ EKE AL HSEKLA+ G++++ G IRV KNLRVC
Sbjct: 790 --DAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVC 831
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 203/387 (52%), Gaps = 13/387 (3%)
Query: 33 SFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNT 92
S G +Q+H +K+ +V L+ F +N S A +FD + E D++ +N+
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS---ARKVFDEMTERDVISWNS 266
Query: 93 MARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIK 152
+ GY + + + +FV++L SG+ D + S+ CA + + G+ +H +K
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA--DSRLISLGRAVHSIGVK 324
Query: 153 LGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSL 212
+ C TL+++Y++C D+++A+ +F +S+ VVSY ++I YAR EA+ L
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 213 FRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAK 272
F E++E + P T+ + L+ CA LD GK +HE+IK+ L + V+ AL+DM+AK
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK 444
Query: 273 CGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQ-VSPDEITFLG 331
CG + +A VF M KD +W+ +I Y+ + ++++ +F +++ + SPDE T
Sbjct: 445 CGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 332 LLYACSHTGLVDEGWN-YFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPI 390
+L AC+ D+G + Y MR+ Y + + +VD+ + G L A+ D++
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIAS 562
Query: 391 KSTPILWRTLLSSCSSHNNLGLAKQVI 417
K + W +++ H G K+ I
Sbjct: 563 KDL-VSWTVMIAGYGMH---GFGKEAI 585
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 198/409 (48%), Gaps = 15/409 (3%)
Query: 14 PPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSME 73
P LC+ L L S + K++ D N+ +KL T ++
Sbjct: 94 PRTLCS----VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTN---CGDLK 146
Query: 74 HAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACA 133
A +FD + + +N + ++S +I LF ++++SG+ D Y+F + K+ +
Sbjct: 147 EASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFS 206
Query: 134 CVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSY 193
+ ++ G+QLH F +K G V +L+ Y + V++AR++F+ ++E V+S+
Sbjct: 207 SL--RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 264
Query: 194 NAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKK 253
N+II Y + + LS+F ++ ++ T++S + CA + LG+ +H K
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 254 YGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILM 313
+ + L+DM++KCG LD A +VF MS + ++++MI YA G +++ +
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 314 FEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLG 373
FEEM + +SPD T +L C+ L+DEG +++ + I ++D+
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN-DLGFDIFVSNALMDMYA 443
Query: 374 RAGRLDEAYRFIDELPIKSTPILWRTLLS----SCSSHNNLGLAKQVIE 418
+ G + EA E+ +K I W T++ +C ++ L L ++E
Sbjct: 444 KCGSMQEAELVFSEMRVKDI-ISWNTIIGGYSKNCYANEALSLFNLLLE 491
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 155/325 (47%), Gaps = 13/325 (4%)
Query: 121 DDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARR 180
D + S+L+ CA +++L++GK++ F G + + + L +Y C D++ A R
Sbjct: 93 DPRTLCSVLQLCA--DSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 181 IFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGS 240
+F+ + + +N ++ A+S + ++ LF+++ ++ T S + L S
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 241 LDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVA 300
+ G+ +H +I K G + V +L+ + K R+D A VFD M+ +D +W+++I
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 301 YATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVP 360
Y ++G K + +F +M+ + + D T + + C+ + L+ G +S+ K
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG-RAVHSIGVKACFSR 329
Query: 361 GIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERI 420
+ ++D+ + G LD A E+ +S + S + + GLA + + ++
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV----SYTSMIAGYAREGLAGEAV-KL 384
Query: 421 FELDDSHGGD---YVILS--NLCAR 440
FE + G Y + + N CAR
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCAR 409
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/487 (39%), Positives = 287/487 (58%), Gaps = 4/487 (0%)
Query: 72 MEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKA 131
+E A LF R E D V + M +G +++ AI F E+ GL D Y F S+L A
Sbjct: 221 IEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA 279
Query: 132 CACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVV 191
C +GA + EGKQ+H I+ ++YV + LI++Y +C + A+ +F+ + + VV
Sbjct: 280 CGGLGA--INEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 192 SYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYI 251
S+ A++ Y ++ R EA+ +F ++Q + P T+ A+S+CA + SL+ G H
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 252 KKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSI 311
GL YV V+ +L+ ++ KCG +DD+ +F+ M+ +D +W+AM+ AYA G+ ++I
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 312 LMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDL 371
+F++M++ + PD +T G++ ACS GLV++G YF M +YGIVP I HY CM+DL
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDL 517
Query: 372 LGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDY 431
R+GRL+EA RFI+ +P I W TLLS+C + NL + K E + ELD H Y
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 432 VILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQ 491
+LS++ A G+W+ V LR+ M+++ V K PG S I+ + F + D Y +
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIY 637
Query: 492 KALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRV 551
L+EL ++ GY PDTS VHH D+E+ K L YHSE+LAI FGL+ P G IRV
Sbjct: 638 AKLEELNNKIIDNGYKPDTSFVHH-DVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696
Query: 552 VKNLRVC 558
KNLRVC
Sbjct: 697 GKNLRVC 703
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 198/418 (47%), Gaps = 56/418 (13%)
Query: 79 FDRIPEPDIVLFNTMARGYSRSK---TPIRAIFLFVELLNSGLLPDDYSFPSLLKACACV 135
F+++P+ D V +N + GYS S ++A + ++ L + ++LK +
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL--TRVTLMTMLKLSSSN 152
Query: 136 GAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYN- 194
G +L GKQ+H IKLG S L V + L+ +YA + A+++F + + V YN
Sbjct: 153 GHVSL--GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNS 210
Query: 195 -----------------------------AIITAYARSSRPNEALSLFRELQERNLKPTD 225
A+I A++ EA+ FRE++ + LK
Sbjct: 211 LMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 226 VTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDN 285
S L +C LG+++ GK IH I + ++ V +ALIDM+ KC L A +VFD
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 286 MSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEG 345
M K+ +W+AM+V Y G+ +++ +F +M ++ + PD T + AC++ ++EG
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 346 WNYFYSMRDKYGIVPGIKHY----GCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLL 401
S I G+ HY +V L G+ G +D++ R +E+ ++ + W ++
Sbjct: 391 -----SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA-VSWTAMV 444
Query: 402 SSCSSHNNLGLAKQVIERIFELDDSHG--GDYVILSNL---CARAGRWEDVDYLRKLM 454
S++ G A + I+ +F+ HG D V L+ + C+RAG E KLM
Sbjct: 445 ---SAYAQFGRAVETIQ-LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 155/286 (54%), Gaps = 12/286 (4%)
Query: 26 SLLPRCTSFRGL---KQIHAVTIKTHLQNDLNVLTKLIN-FCTQNPTTSSMEHAHLLFDR 81
S+LP C + KQIHA I+T+ Q+ + V + LI+ +C + +A +FDR
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC----KCKCLHYAKTVFDR 330
Query: 82 IPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALE 141
+ + ++V + M GY ++ A+ +F+++ SG+ PD Y+ + ACA V +LE
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV--SSLE 388
Query: 142 EGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYA 201
EG Q H AI GL + V +L+ LY +C D++ + R+F ++ VS+ A+++AYA
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448
Query: 202 RSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLG-KWIHEYIKKYGLDKYV 260
+ R E + LF ++ + LKP VT+ +S+C+ G ++ G ++ +YG+ +
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSI 508
Query: 261 KVNTALIDMHAKCGRLDDAVSVFDNMS-GKDTQAWSAMIVAYATHG 305
+ +ID+ ++ GRL++A+ + M D W+ ++ A G
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 67/278 (24%)
Query: 134 CVGAEALEEG---KQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCV 190
C+G A + K +H I+ ++ +++ YA ARR+F+ I +P +
Sbjct: 13 CIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL 72
Query: 191 VSYNAIITAYARSSRPNEALSLFRELQERN------------------------------ 220
S+N ++ AY+++ +E S F +L +R+
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 221 --LKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAK------ 272
T VT+++ L + G + LGK IH + K G + Y+ V + L+ M+A
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 273 -------------------------CGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQG 307
CG ++DA+ +F M KD+ +W+AMI A +G
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLA 251
Query: 308 HKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEG 345
++I F EM + D+ F +L AC G ++EG
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 362 bits (929), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/538 (37%), Positives = 312/538 (57%), Gaps = 11/538 (2%)
Query: 26 SLLPRCTSFRGLK---QIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRI 82
+LL C R L+ ++HA IKT + T+L+ F + +E A + D +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK---CDCLEDARKVLDEM 113
Query: 83 PEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEE 142
PE ++V + M YS++ A+ +F E++ S P++++F ++L +C + A L
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSC--IRASGLGL 171
Query: 143 GKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYAR 202
GKQ+H +K +S+++V ++L+++YA+ ++ AR IFE + E VVS AII YA+
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 203 SSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKV 262
EAL +F L + P VT S L++ + L LD GK H ++ + L Y +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 263 NTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMM-KAQ 321
+LIDM++KCG L A +FDNM + +W+AM+V Y+ HG G + + +F M + +
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 322 VSPDEITFLGLLYACSHTGLVDEGWNYFYSM-RDKYGIVPGIKHYGCMVDLLGRAGRLDE 380
V PD +T L +L CSH + D G N F M +YG PG +HYGC+VD+LGRAGR+DE
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 381 AYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCAR 440
A+ FI +P K T + +LL +C H ++ + + V R+ E++ + G+YVILSNL A
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYAS 471
Query: 441 AGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKE 500
AGRW DV+ +R +M + V K PG S I+ + F + D H ++ + E+ +
Sbjct: 472 AGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIK 531
Query: 501 LKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
+K GYVPD S V + D+++E+KE L HSEKLA+TFGL+ T G IRV KNLR+C
Sbjct: 532 MKQAGYVPDLSCVLY-DVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRIC 588
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 362 bits (928), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 194/534 (36%), Positives = 314/534 (58%), Gaps = 6/534 (1%)
Query: 25 LSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPE 84
L L R + K H I+ L+ D+ +L LIN ++ +E A +FD + E
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSK---CGFVELARQVFDGMLE 124
Query: 85 PDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGK 144
+V +NTM Y+R++ A+ +F+E+ N G +++ S+L AC V +ALE K
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG-VNCDALE-CK 182
Query: 145 QLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSS 204
+LHC ++K ++ NLYV T L++LYA+C ++ A ++FE++ + V++++++ Y ++
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 205 RPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNT 264
EAL L+R Q +L+ T+ S + +C+ L +L GK +H I K G V V +
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 265 ALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSP 324
+ +DM+AKCG L ++ +F + K+ + W+ +I +A H + + +++FE+M + + P
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 362
Query: 325 DEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRF 384
+E+TF LL C HTGLV+EG +F MR YG+ P + HY CMVD+LGRAG L EAY
Sbjct: 363 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 422
Query: 385 IDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRW 444
I +P T +W +LL+SC + NL LA+ E++FEL+ + G++V+LSN+ A +W
Sbjct: 423 IKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQW 482
Query: 445 EDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMV 504
E++ RKL++D V KV G S I++ + V F G+ H ++ LD LV + +
Sbjct: 483 EEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKF 542
Query: 505 GYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
GY P H D+E +KE L HSEKLA+ FGL+ P + +R++KNLR+C
Sbjct: 543 GYKPSVEHELH-DVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRIC 595
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 216/599 (36%), Positives = 325/599 (54%), Gaps = 65/599 (10%)
Query: 23 NALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRI 82
+ LSLL C + R L QIH + IK + D KLI C + + ++ +A L
Sbjct: 7 HCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAIS-ISDALPYARRLLLCF 65
Query: 83 PEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLL-PDDYSFPSL---------LKAC 132
PEPD +FNT+ RGYS S P ++ +FVE++ G + PD +SF + L+
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 133 ACVGAEALEEGKQLHC-----------------FAIKL----------GLNSNLYVC--- 162
+ +AL+ G + H FA K+ N+ + C
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 163 ---------------------TTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYA 201
++ Y + ++E+A+RIF + VS++ +I A
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 202 RSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVK 261
+ NE+ FRELQ + P +V++ LS+C+ GS + GK +H +++K G V
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305
Query: 262 VNTALIDMHAKCGRLDDAVSVFDNMSGKD-TQAWSAMIVAYATHGQGHKSILMFEEMMKA 320
VN ALIDM+++CG + A VF+ M K +W++MI A HGQG +++ +F EM
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365
Query: 321 QVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDE 380
V+PD I+F+ LL+ACSH GL++EG +YF M+ Y I P I+HYGCMVDL GR+G+L +
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQK 425
Query: 381 AYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCAR 440
AY FI ++PI T I+WRTLL +CSSH N+ LA+QV +R+ ELD ++ GD V+LSN A
Sbjct: 426 AYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYAT 485
Query: 441 AGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKE 500
AG+W+DV +RK M + + K S +EV + +F +G+ + + L E++
Sbjct: 486 AGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILR 545
Query: 501 LK-MVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
LK GY P+ + + D+E+EEKE + HSEKLA+ F L G IR+VKNLR+C
Sbjct: 546 LKDEAGYTPEVASALY-DVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRIC 603
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/526 (36%), Positives = 315/526 (59%), Gaps = 12/526 (2%)
Query: 39 QIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYS 98
++H + D + TKLI + S+++A +FD+ + I ++N + R +
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSD---LGSVDYARKVFDKTRKRTIYVWNALFRALT 154
Query: 99 RSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEA----LEEGKQLHCFAIKLG 154
+ + L+ ++ G+ D +++ +LKAC V +E L +GK++H + G
Sbjct: 155 LAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKAC--VASECTVNHLMKGKEIHAHLTRRG 212
Query: 155 LNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFR 214
+S++Y+ TTL+++YA V+ A +F + VVS++A+I YA++ + EAL FR
Sbjct: 213 YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFR 272
Query: 215 EL--QERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAK 272
E+ + ++ P VTM+S L +CA L +L+ GK IH YI + GLD + V +AL+ M+ +
Sbjct: 273 EMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGR 332
Query: 273 CGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGL 332
CG+L+ VFD M +D +W+++I +Y HG G K+I +FEEM+ SP +TF+ +
Sbjct: 333 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 333 LYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKS 392
L ACSH GLV+EG F +M +GI P I+HY CMVDLLGRA RLDEA + + ++ +
Sbjct: 393 LGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEP 452
Query: 393 TPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRK 452
P +W +LL SC H N+ LA++ R+F L+ + G+YV+L+++ A A W++V ++K
Sbjct: 453 GPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKK 512
Query: 453 LMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSL 512
L++ RG+ K+PG +EV + F S D + + L +L +++K GY+P T
Sbjct: 513 LLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKG 572
Query: 513 VHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
V + ++E EEKE + HSEKLA+ FGL+NT G IR+ KNLR+C
Sbjct: 573 VLY-ELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLC 617
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 175/363 (48%), Gaps = 24/363 (6%)
Query: 111 VELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYA 170
+ +L+ P ++ L+ C +L + ++H + G + + ++ T LI +Y+
Sbjct: 66 IRVLSQESSPSQQTYELLILCCG--HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYS 123
Query: 171 ECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLS 230
+ V+ AR++F+ + + +NA+ A + E L L+ ++ ++ T
Sbjct: 124 DLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTY 183
Query: 231 ALSSCA----LLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNM 286
L +C + L GK IH ++ + G +V + T L+DM+A+ G +D A VF M
Sbjct: 184 VLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM 243
Query: 287 SGKDTQAWSAMIVAYATHGQGHKSILMFEEMMK--AQVSPDEITFLGLLYACSHTGLVDE 344
++ +WSAMI YA +G+ +++ F EMM+ SP+ +T + +L AC+ +++
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303
Query: 345 G--WNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLS 402
G + + R I+P I +V + GR G+L+ R D + + + W +L+S
Sbjct: 304 GKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLEVGQRVFDRMHDRDV-VSWNSLIS 359
Query: 403 SCSSHNNLGLAKQVIERIFELDDSHGGD-----YVILSNLCARAGRWEDVDYLRKLM-KD 456
S H G K+ I+ IFE ++G +V + C+ G E+ L + M +D
Sbjct: 360 SYGVH---GYGKKAIQ-IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRD 415
Query: 457 RGV 459
G+
Sbjct: 416 HGI 418
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%)
Query: 191 VSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEY 250
+S N +I + + + +A+ + QE + P+ T + C SL +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLS--QESS--PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 251 IKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKS 310
I G D+ + T LI M++ G +D A VFD + W+A+ A G G +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 311 ILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRD------KYGIVPGIKH 364
+ ++ +M + V D T+ +L AC + N+ ++ + G +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTV---NHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 365 YGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLA--KQVIERIFE 422
+VD+ R G +D A +P+++ + W ++ +C + N + E + E
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNV-VSWSAMI-ACYAKNGKAFEALRTFREMMRE 277
Query: 423 LDDSHGGDYVILSNL--CARAGRWEDVDYLRKLMKDRG-----------VLKVPGCSSIE 469
DS ++S L CA E + + RG V C +E
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 470 VNNVV------------REFFSGDGVHSYSTDLQKALDELV 498
V V S GVH Y + +E++
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/525 (36%), Positives = 316/525 (60%), Gaps = 11/525 (2%)
Query: 37 LKQIHAVTIKTHLQNDLNVLTKLIN--FCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMA 94
LK++H ++K V +L+ F S+ +A +F I + +N +
Sbjct: 414 LKELHCYSLKQEF-----VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 95 RGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLG 154
G+++S P ++ +++ SGLLPD ++ SLL AC+ + ++L GK++H F I+
Sbjct: 469 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL--KSLRLGKEVHGFIIRNW 526
Query: 155 LNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFR 214
L +L+V ++++LY C ++ + +F+ + + +VS+N +IT Y ++ P+ AL +FR
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 215 ELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCG 274
++ ++ ++M+ +C+LL SL LG+ H Y K+ L+ + +LIDM+AK G
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 275 RLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLY 334
+ + VF+ + K T +W+AMI+ Y HG ++I +FEEM + +PD++TFLG+L
Sbjct: 647 SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 706
Query: 335 ACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFI-DELPIKST 393
AC+H+GL+ EG Y M+ +G+ P +KHY C++D+LGRAG+LD+A R + +E+ ++
Sbjct: 707 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 766
Query: 394 PILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKL 453
+W++LLSSC H NL + ++V ++FEL+ +YV+LSNL A G+WEDV +R+
Sbjct: 767 VGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQR 826
Query: 454 MKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLV 513
M + + K GCS IE+N V F G+ +++ L ++ +GY PDT V
Sbjct: 827 MNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSV 886
Query: 514 HHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
H D+ +EEK LR HSEKLA+T+GL+ T GTTIRV KNLR+C
Sbjct: 887 QH-DLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRIC 930
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 168/331 (50%), Gaps = 17/331 (5%)
Query: 24 ALSLLPRCTSFR-----GLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLL 78
AL LL + + R G K V+ T L+ND + T++I T S + + +
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRII---TMYAMCGSPDDSRFV 142
Query: 79 FDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNS-GLLPDDYSFPSLLKACACVGA 137
FD + ++ +N + YSR++ + F+E++++ LLPD +++P ++KACA G
Sbjct: 143 FDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA--GM 200
Query: 138 EALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAII 197
+ G +H +K GL +++V L++ Y V A ++F+ + E +VS+N++I
Sbjct: 201 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
Query: 198 TAYARSSRPNEALSLFRELQERN----LKPTDVTMLSALSSCALLGSLDLGKWIHEYIKK 253
++ + E+ L E+ E N P T+++ L CA + LGK +H + K
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 254 YGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILM 313
LDK + +N AL+DM++KCG + +A +F + K+ +W+ M+ ++ G H + +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 314 FEEMMKA--QVSPDEITFLGLLYACSHTGLV 342
+M+ V DE+T L + C H +
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 148/305 (48%), Gaps = 13/305 (4%)
Query: 40 IHAVTIKTHLQNDLNVLTKLINF-CTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYS 98
+H + +KT L D+ V L++F T T +++ LFD +PE ++V +N+M R +S
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ----LFDIMPERNLVSWNSMIRVFS 264
Query: 99 RSKTPIRAIFLFVELL----NSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLG 154
+ + L E++ + +PD + ++L CA + GK +H +A+KL
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA--REREIGLGKGVHGWAVKLR 322
Query: 155 LNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFR 214
L+ L + L+++Y++C + A+ IF+ + VVS+N ++ ++ + + R
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 215 ELQE--RNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAK 272
++ ++K +VT+L+A+ C L K +H Y K V A + +AK
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 273 CGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGL 332
CG L A VF + K +W+A+I +A S+ +M + + PD T L
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 333 LYACS 337
L ACS
Sbjct: 503 LSACS 507
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 309/541 (57%), Gaps = 12/541 (2%)
Query: 26 SLLPRCTSFRGL---KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRI 82
S+ C L KQ+H+ I++ L +D V L++ + S++ +FDR+
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 83 PEPDIVLFNTMARGYSRS-KTPIRAIFLFVELLNSG-LLPDDYSFPSLLKACACVGAEAL 140
+ ++ + + GY ++ AI LF E++ G + P+ ++F S KAC + +
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 141 EEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAY 200
GKQ+ A K GL SN V ++I+++ + +E A+R FE++SE +VSYN +
Sbjct: 392 --GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 201 ARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYV 260
R+ +A L E+ ER L + T S LS A +GS+ G+ IH + K GL
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 261 KVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKA 320
V ALI M++KCG +D A VF+ M ++ +W++MI +A HG + + F +M++
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 321 QVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDE 380
V P+E+T++ +L ACSH GLV EGW +F SM + + I P ++HY CMVDLL RAG L +
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 381 AYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCAR 440
A+ FI+ +P ++ ++WRT L +C H+N L K +I ELD + Y+ LSN+ A
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 441 AGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKE 500
AG+WE+ +R+ MK+R ++K GCS IEV + + +F+ GD H + + LD L+ E
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749
Query: 501 LKMVGYVPDTSLVHHGDMEDEEKEIALR---YHSEKLAITFGLLNTPPGTTIRVVKNLRV 557
+K GYVPDT LV H E+ ++ R HSEK+A+ FGL++T +RV KNLRV
Sbjct: 750 IKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRV 809
Query: 558 C 558
C
Sbjct: 810 C 810
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 197/407 (48%), Gaps = 16/407 (3%)
Query: 26 SLLPRCT---SFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRI 82
SLL C FR K +HA I+ ++ D + LI+ +++ ++ E R
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126
Query: 83 PEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEE 142
+ D+V ++ M Y + + AI +FVE L GL+P+DY + ++++AC+ ++ +
Sbjct: 127 GKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS--NSDFVGV 184
Query: 143 GKQLHCFAIKLG-LNSNLYVCTTLINLYAECSD-VEAARRIFENISEPCVVSYNAIITAY 200
G+ F +K G S++ V +LI+++ + + E A ++F+ +SE VV++ +IT
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 201 ARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYV 260
+ P EA+ F ++ + T+ S S+CA L +L LGK +H + + GL
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD-- 302
Query: 261 KVNTALIDMHAKC---GRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQ-GHKSILMFEE 316
V +L+DM+AKC G +DD VFD M +W+A+I Y + ++I +F E
Sbjct: 303 DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 317 MM-KAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRA 375
M+ + V P+ TF AC + G K G+ ++ + ++
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVG-KQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 376 GRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFE 422
R+++A R + L K+ + + T L + N A +++ I E
Sbjct: 422 DRMEDAQRAFESLSEKNL-VSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 168/374 (44%), Gaps = 22/374 (5%)
Query: 59 LINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGL 118
+I+F +P ++ + +RI D ++ + G R + A+ L + G+
Sbjct: 3 MISFSFPSPAKLPIKSQPSVSNRINVADRLILRHLNAGDLRG--AVSALDL---MARDGI 57
Query: 119 LP-DDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEA 177
P D +F SLLK+C + A GK +H I+ + + + +LI+LY++ D
Sbjct: 58 RPMDSVTFSSLLKSC--IRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAK 115
Query: 178 ARRIFENI---SEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSS 234
A +FE + + VVS++A++ Y + R +A+ +F E E L P D + + +
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 235 CALLGSLDLGKWIHEYIKKYG-LDKYVKVNTALIDMHAKC-GRLDDAVSVFDNMSGKDTQ 292
C+ + +G+ ++ K G + V V +LIDM K ++A VFD MS +
Sbjct: 176 CSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVV 235
Query: 293 AWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSM 352
W+ MI G ++I F +M+ + D+ T + AC+ + G +S
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG-KQLHSW 294
Query: 353 RDKYGIVPGIKHYGCMVDLLGRA---GRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNN 409
+ G+V ++ +VD+ + G +D+ + D + S + W L++ N
Sbjct: 295 AIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSV-MSWTALIT--GYMKN 349
Query: 410 LGLAKQVIERIFEL 423
LA + I E+
Sbjct: 350 CNLATEAINLFSEM 363
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 359 bits (922), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 319/542 (58%), Gaps = 10/542 (1%)
Query: 21 TPNALSLLPRCTSFR--GLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLL 78
T LS L R +S + LK+IHA+ ++T ++LT+L+ M +A +
Sbjct: 9 TKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLV---VIGDMCYARQV 65
Query: 79 FDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAE 138
FD + +P I L+NT+ +GY R++ P ++ L+ ++ + G+ PD++++P ++KA + +G
Sbjct: 66 FDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDF 125
Query: 139 ALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIIT 198
+ G LH +K G V T L+ +Y + ++ +A +FE++ +V++NA +
Sbjct: 126 SC--GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 199 AYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDK 258
++ AL F ++ ++ T++S LS+C LGSL++G+ I++ +K +D
Sbjct: 184 VCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243
Query: 259 YVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMM 318
+ V A +DMH KCG + A +F+ M ++ +WS MIV YA +G +++ +F M
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 319 KAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSM--RDKYGIVPGIKHYGCMVDLLGRAG 376
+ P+ +TFLG+L ACSH GLV+EG YF M + + P +HY CMVDLLGR+G
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363
Query: 377 RLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSN 436
L+EAY FI ++P++ +W LL +C+ H ++ L ++V + + E G +V+LSN
Sbjct: 364 LLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSN 423
Query: 437 LCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDE 496
+ A AG+W+ VD +R M+ G KV SS+E + F GD H S + + LDE
Sbjct: 424 IYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDE 483
Query: 497 LVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLR 556
++K+++ +GYVPDT V H D+E EEKE +L +HSEKLAI FGL+ PG IRV+KNLR
Sbjct: 484 ILKKIRKMGYVPDTCSVFH-DVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLR 542
Query: 557 VC 558
C
Sbjct: 543 TC 544
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 359 bits (921), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/548 (35%), Positives = 321/548 (58%), Gaps = 13/548 (2%)
Query: 13 PPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSM 72
P T+ A S LP S KQ+H IK + +D V T LI+ ++N M
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLS--KQVHVHAIKINNVSDSFVSTALIDAYSRN---RCM 468
Query: 73 EHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKAC 132
+ A +LF+R D+V +N M GY++S + + LF + G DD++ ++ K C
Sbjct: 469 KEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 133 ACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVS 192
+ A + +GKQ+H +AIK G + +L+V + ++++Y +C D+ AA+ F++I P V+
Sbjct: 528 GFLFA--INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585
Query: 193 YNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIK 252
+ +I+ + A +F +++ + P + T+ + + + L +L+ G+ IH
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 253 KYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSIL 312
K V T+L+DM+AKCG +DDA +F + + AW+AM+V A HG+G +++
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705
Query: 313 MFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLL 372
+F++M + PD++TF+G+L ACSH+GLV E + + SM YGI P I+HY C+ D L
Sbjct: 706 LFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL 765
Query: 373 GRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYV 432
GRAG + +A I+ + ++++ ++RTLL++C + K+V ++ EL+ YV
Sbjct: 766 GRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYV 825
Query: 433 ILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQK 492
+LSN+ A A +W+++ R +MK V K PG S IEV N + F D + + + +
Sbjct: 826 LLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYR 885
Query: 493 ALDELVKELKMVGYVPDT--SLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIR 550
+ ++++++K GYVP+T +LV D+E+EEKE AL YHSEKLA+ FGLL+TPP T IR
Sbjct: 886 KVKDMIRDIKQEGYVPETDFTLV---DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 942
Query: 551 VVKNLRVC 558
V+KNLRVC
Sbjct: 943 VIKNLRVC 950
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 191/384 (49%), Gaps = 13/384 (3%)
Query: 38 KQIHAVTIKTHLQNDLNVLTKLIN-FCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARG 96
+Q+H + +K L L V LIN +C A +FD + E D++ +N++ G
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCK----LRKFGFARTVFDNMSERDLISWNSVIAG 390
Query: 97 YSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLN 156
+++ + A+ LF++LL GL PD Y+ S+LKA + + E L KQ+H AIK+
Sbjct: 391 IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL-PEGLSLSKQVHVHAIKINNV 449
Query: 157 SNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFREL 216
S+ +V T LI+ Y+ ++ A +FE + +V++NA++ Y +S ++ L LF +
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFERHNFD-LVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 217 QERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRL 276
++ + D T+ + +C L +++ GK +H Y K G D + V++ ++DM+ KCG +
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 277 DDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYAC 336
A FD++ D AW+ MI +G+ ++ +F +M V PDE T L A
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 337 SHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPIL 396
S +++G ++ K +VD+ + G +D+AY + + +
Sbjct: 629 SCLTALEQG-RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA- 686
Query: 397 WRTLLSSCSSHN----NLGLAKQV 416
W +L + H L L KQ+
Sbjct: 687 WNAMLVGLAQHGEGKETLQLFKQM 710
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 151/297 (50%), Gaps = 8/297 (2%)
Query: 110 FVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLY 169
F +++ S + D +F +L V ++L G+Q+HC A+KLGL+ L V +LIN+Y
Sbjct: 303 FADMVESDVECDQVTF--ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMY 360
Query: 170 AECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTML 229
+ AR +F+N+SE ++S+N++I A++ EA+ LF +L LKP TM
Sbjct: 361 CKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMT 420
Query: 230 SALSSCALL-GSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSG 288
S L + + L L L K +H + K V+TALID +++ + +A +F+ +
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF 480
Query: 289 KDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWN- 347
D AW+AM+ Y GHK++ +F M K D+ T + C +++G
Sbjct: 481 -DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 348 YFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSC 404
+ Y+++ Y + + ++D+ + G + A D +P+ + W T++S C
Sbjct: 540 HAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPD-DVAWTTMISGC 593
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 148/329 (44%), Gaps = 47/329 (14%)
Query: 9 ITQSPPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPT 68
+T SP KLC ++ + + H K L D V L+N +
Sbjct: 146 MTLSPMLKLCLHSGYVWAS----------ESFHGYACKIGLDGDEFVAGALVNIYLK--- 192
Query: 69 TSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSL 128
++ +LF+ +P D+VL+N M + Y AI L +SGL P++ +
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT---- 248
Query: 129 LKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEP 188
L+ A + + + G+ + +A +D + +SE
Sbjct: 249 LRLLARISGDDSDAGQ---------------------VKSFANGNDASS-------VSE- 279
Query: 189 CVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIH 248
++ N ++ Y S + + L F ++ E +++ VT + L++ + SL LG+ +H
Sbjct: 280 -IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 249 EYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGH 308
K GLD + V+ +LI+M+ K + A +VFDNMS +D +W+++I A +G
Sbjct: 339 CMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEV 398
Query: 309 KSILMFEEMMKAQVSPDEITFLGLLYACS 337
+++ +F ++++ + PD+ T +L A S
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
Query: 143 GKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYAR 202
GK H + N ++ LI++Y++C + ARR+F+ + + +VS+N+I+ AYA+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 203 SSR-----PNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLD 257
SS +A LFR L++ + + +T+ L C G + + H Y K GLD
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 258 KYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEM 317
V AL++++ K G++ + +F+ M +D W+ M+ AY G ++I +
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 318 MKAQVSPDEITF 329
+ ++P+EIT
Sbjct: 238 HSSGLNPNEITL 249
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 61 NFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPI-----RAIFLFVELLN 115
N + S+ +A +FD++P+ D+V +N++ Y++S + +A LF L
Sbjct: 79 NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQ 138
Query: 116 SGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDV 175
+ + +LK C G E H +A K+GL+ + +V L+N+Y + V
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYVWASES--FHGYACKIGLDGDEFVAGALVNIYLKFGKV 196
Query: 176 EAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTM 228
+ + +FE + VV +N ++ AY EA+ L L P ++T+
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 320/551 (58%), Gaps = 15/551 (2%)
Query: 16 KLCTNTPNALS---LLPRCTSFRGLKQ---IHAVTIKTHLQNDLNVLTKLINFCTQNPTT 69
+L +P++ + LL C+ L+ +HA + D+ V LI +
Sbjct: 111 QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRL 170
Query: 70 SSMEHAHLLFDRIPEPD--IVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPS 127
S A +F+ +P P+ IV + + Y+++ P+ A+ +F ++ + PD + S
Sbjct: 171 GS---ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS 227
Query: 128 LLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISE 187
+L A C+ + L++G+ +H +K+GL + +L +YA+C V A+ +F+ +
Sbjct: 228 VLNAFTCL--QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS 285
Query: 188 PCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWI 247
P ++ +NA+I+ YA++ EA+ +F E+ ++++P +++ SA+S+CA +GSL+ + +
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 248 HEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQG 307
+EY+ + V +++ALIDM AKCG ++ A VFD +D WSAMIV Y HG+
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRA 405
Query: 308 HKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGC 367
++I ++ M + V P+++TFLGLL AC+H+G+V EGW +F M D + I P +HY C
Sbjct: 406 REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYAC 464
Query: 368 MVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSH 427
++DLLGRAG LD+AY I +P++ +W LLS+C H ++ L + +++F +D S+
Sbjct: 465 VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSN 524
Query: 428 GGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYS 487
G YV LSNL A A W+ V +R MK++G+ K GCS +EV + F GD H
Sbjct: 525 TGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRY 584
Query: 488 TDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGT 547
++++ ++ + LK G+V + H D+ DEE E L HSE++AI +GL++TP GT
Sbjct: 585 EEIERQVEWIESRLKEGGFVANKDASLH-DLNDEEAEETLCSHSERIAIAYGLISTPQGT 643
Query: 548 TIRVVKNLRVC 558
+R+ KNLR C
Sbjct: 644 PLRITKNLRAC 654
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 223/431 (51%), Gaps = 23/431 (5%)
Query: 26 SLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEP 85
SL+ T LKQIHA + LQ ++TKLI+ + + + A +FD +P P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH---ASSSFGDITFARQVFDDLPRP 82
Query: 86 DIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQ 145
I +N + RGYSR+ A+ ++ + + + PD ++FP LLKAC+ G L+ G+
Sbjct: 83 QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS--GLSHLQMGRF 140
Query: 146 LHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEP--CVVSYNAIITAYARS 203
+H +LG +++++V LI LYA+C + +AR +FE + P +VS+ AI++AYA++
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 204 SRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVN 263
P EAL +F ++++ ++KP V ++S L++ L L G+ IH + K GL+ +
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 264 TALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVS 323
+L M+AKCG++ A +FD M + W+AMI YA +G ++I MF EM+ V
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 324 PDEITFLGLLYACSHTGLVDEGWN-YFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAY 382
PD I+ + AC+ G +++ + Y Y R Y I ++D+ + G ++ A
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGA- 377
Query: 383 RFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIE--RIFELDDSHGGDYVILSNLCA- 439
R + + + ++W ++ H G A++ I R E H D L L A
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLH---GRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Query: 440 ------RAGRW 444
R G W
Sbjct: 435 NHSGMVREGWW 445
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 159/311 (51%), Gaps = 13/311 (4%)
Query: 115 NSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSD 174
NSG+ D + + SL+ + A + KQ+H + LGL + ++ T LI+ + D
Sbjct: 15 NSGIHSDSF-YASLIDS-----ATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGD 68
Query: 175 VEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSS 234
+ AR++F+++ P + +NAII Y+R++ +AL ++ +Q + P T L +
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 235 CALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDN--MSGKDTQ 292
C+ L L +G+++H + + G D V V LI ++AKC RL A +VF+ + +
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 293 AWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSM 352
+W+A++ AYA +G+ +++ +F +M K V PD + + +L A + + +G + S+
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 353 RDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGL 412
K G+ + + + G++ A D++ ILW ++S + + G
Sbjct: 249 V-KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISGYAKN---GY 303
Query: 413 AKQVIERIFEL 423
A++ I+ E+
Sbjct: 304 AREAIDMFHEM 314
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 357 bits (916), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 307/586 (52%), Gaps = 71/586 (12%)
Query: 39 QIHAVTIKT---HLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPD--------- 86
Q HA +K+ ++ + N L + + C +P S + A +FD I E D
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSP--SLLHSARKVFDEILEKDERSWTTMMT 227
Query: 87 -----------------------IVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDY 123
+V +N M GY A+ + +++SG+ D++
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 124 SFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFE 183
++PS+++ACA G L+ GKQ+H + ++ + + + +L++LY +C + AR IFE
Sbjct: 288 TYPSVIRACATAGL--LQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFE 344
Query: 184 NISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNL---------------------- 221
+ +VS+NA+++ Y S EA +F+E++E+N+
Sbjct: 345 KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 222 ---------KPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAK 272
+P D A+ SCA+LG+ G+ H + K G D + ALI M+AK
Sbjct: 405 FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464
Query: 273 CGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGL 332
CG +++A VF M D+ +W+A+I A HG G +++ ++EEM+K + PD IT L +
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 333 LYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKS 392
L ACSH GLVD+G YF SM Y I PG HY ++DLL R+G+ +A I+ LP K
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 393 TPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRK 452
T +W LLS C H N+ L +++F L H G Y++LSN+ A G+WE+V +RK
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRK 644
Query: 453 LMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSL 512
LM+DRGV K CS IE+ V F D H + + L +L KE++ +GYVPDTS
Sbjct: 645 LMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSF 704
Query: 513 VHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
V H D KE L HSEK+A+ FGL+ PPGTTIR+ KNLR C
Sbjct: 705 VLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTC 750
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/519 (22%), Positives = 215/519 (41%), Gaps = 111/519 (21%)
Query: 5 PSPPITQSPPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLIN-FC 63
P+P + ++ + N L L R TS + + +H I Q ++L +LI+ +C
Sbjct: 3 PNPDLVRAIANRYAANLRLCLPL--RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC 60
Query: 64 TQNPTTSSMEHAHLLFDRIPEPD---------------------------------IVLF 90
+S + +A LFD I EPD V++
Sbjct: 61 K----SSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMY 116
Query: 91 NTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFA 150
N M G+S + AI LF ++ + G PD+++F S+L A V A+ ++ Q H A
Sbjct: 117 NAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALV-ADDEKQCVQFHAAA 175
Query: 151 IKLGLNSNLYVCTTLINLYAECSD----VEAARRIFENISEP------------------ 188
+K G V L+++Y++C+ + +AR++F+ I E
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYF 235
Query: 189 --------------CVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSS 234
+V+YNA+I+ Y EAL + R + ++ + T S + +
Sbjct: 236 DLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295
Query: 235 CALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAW 294
CA G L LGK +H Y+ + D + +L+ ++ KCG+ D+A ++F+ M KD +W
Sbjct: 296 CATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSW 354
Query: 295 SAMIVAYATHGQGHKSILMFEEMMKAQV-------------------------------S 323
+A++ Y + G ++ L+F+EM + +
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 324 PDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYR 383
P + F G + +C+ G G Y ++ K G + ++ + + G ++EA +
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQY-HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQ 473
Query: 384 FIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFE 422
+P + + W L+++ H + A V E + +
Sbjct: 474 VFRTMPCLDS-VSWNALIAALGQHGHGAEAVDVYEEMLK 511
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 170/408 (41%), Gaps = 84/408 (20%)
Query: 125 FPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFEN 184
+ + L+ C + +L+ + +H I G ++ LI++Y + S++ AR++F+
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 185 ISEP------------------------------CV---VSYNAIITAYARSSRPNEALS 211
ISEP C+ V YNA+IT ++ ++ A++
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 212 LFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWI--HEYIKKYGLDKYVKVNTALIDM 269
LF +++ KP + T S L+ AL+ D + + H K G V+ AL+ +
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVAD-DEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 270 HAKCGR----LDDAVSVFDNMSGKDTQAWS------------------------------ 295
++KC L A VFD + KD ++W+
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 296 --AMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNY--FYS 351
AMI Y G +++ M M+ + + DE T+ ++ AC+ GL+ G +
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 352 MRDKYGIVPGIKHY-GCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNL 410
R+ + H+ +V L + G+ DEA +++P K + W LLS S ++
Sbjct: 314 RREDFSF-----HFDNSLVSLYYKCGKFDEARAIFEKMPAKDL-VSWNALLSGYVSSGHI 367
Query: 411 GLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRG 458
G AK + + E+ + + ++I+ + A G E+ L MK G
Sbjct: 368 GEAKLIFK---EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 354 bits (909), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 288/502 (57%), Gaps = 37/502 (7%)
Query: 25 LSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPE 84
+ L R S K+I+A I L ++TK+++FC + M++A LF+++
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDK---IEDMDYATRLFNQVSN 70
Query: 85 PDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGL-LPDDYSFPSLLKACACVGAEALEEG 143
P++ L+N++ R Y+ + I ++ +LL LPD ++FP + K+CA +G+ L G
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL--G 128
Query: 144 KQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARS 203
KQ+H K G ++ LI++Y + D+ A ++F+ + E V+S+N++++ YAR
Sbjct: 129 KQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARL 188
Query: 204 SRPN-------------------------------EALSLFRELQERNLKPTDVTMLSAL 232
+ EA+ FRE+Q ++P +++++S L
Sbjct: 189 GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 233 SSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQ 292
SCA LGSL+LGKWIH Y ++ G K V ALI+M++KCG + A+ +F M GKD
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVI 308
Query: 293 AWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSM 352
+WS MI YA HG H +I F EM +A+V P+ ITFLGLL ACSH G+ EG YF M
Sbjct: 309 SWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMM 368
Query: 353 RDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGL 412
R Y I P I+HYGC++D+L RAG+L+ A +P+K +W +LLSSC + NL +
Sbjct: 369 RQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDV 428
Query: 413 AKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNN 472
A ++ + EL+ G+YV+L+N+ A G+WEDV LRK++++ + K PG S IEVNN
Sbjct: 429 ALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNN 488
Query: 473 VVREFFSGDGVHSYSTDLQKAL 494
+V+EF SGD + T++ L
Sbjct: 489 IVQEFVSGDNSKPFWTEISIVL 510
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 353 bits (905), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 307/537 (57%), Gaps = 11/537 (2%)
Query: 26 SLLPRCTSFRGLK---QIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRI 82
S+L C L+ QIH+ IKT+ Q + V + LI+ + ++ A + R
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK---LGKLDTAWDILIRF 551
Query: 83 PEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEE 142
D+V + TM GY++ +A+ F ++L+ G+ D+ + + ACA G +AL+E
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA--GLQALKE 609
Query: 143 GKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYAR 202
G+Q+H A G +S+L L+ LY+ C +E + FE +++NA+++ + +
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ 669
Query: 203 SSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKV 262
S EAL +F + + + T SA+ + + ++ GK +H I K G D +V
Sbjct: 670 SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEV 729
Query: 263 NTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQV 322
ALI M+AKCG + DA F +S K+ +W+A+I AY+ HG G +++ F++M+ + V
Sbjct: 730 CNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Query: 323 SPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAY 382
P+ +T +G+L ACSH GLVD+G YF SM +YG+ P +HY C+VD+L RAG L A
Sbjct: 790 RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAK 849
Query: 383 RFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAG 442
FI E+PIK ++WRTLLS+C H N+ + + + EL+ YV+LSNL A +
Sbjct: 850 EFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSK 909
Query: 443 RWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELK 502
+W+ D R+ MK++GV K PG S IEV N + F+ GD H + ++ + +L K
Sbjct: 910 KWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRAS 969
Query: 503 MVGYVPDT-SLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
+GYV D SL++ +++ E+K+ + HSEKLAI+FGLL+ P I V+KNLRVC
Sbjct: 970 EIGYVQDCFSLLN--ELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVC 1024
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 187/404 (46%), Gaps = 11/404 (2%)
Query: 21 TPNALS-LLPRCTSFRGLK---QIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAH 76
TP A S +L C L+ Q+H + +K +D V L++ S EH
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH-- 344
Query: 77 LLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVG 136
+F + + D V +NT+ G S+ +A+ LF + GL PD + SL+ AC+ G
Sbjct: 345 -IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 137 AEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAI 196
L G+QLH + KLG SN + L+NLYA+C+D+E A F VV +N +
Sbjct: 404 T--LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461
Query: 197 ITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGL 256
+ AY + +FR++Q + P T S L +C LG L+LG+ IH I K
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 257 DKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEE 316
V + LIDM+AK G+LD A + +GKD +W+ MI Y + K++ F +
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 317 MMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAG 376
M+ + DE+ + AC+ + EG ++ G + +V L R G
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 377 RLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERI 420
+++E+Y ++ I W L+S N A +V R+
Sbjct: 641 KIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALRVFVRM 683
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 182/365 (49%), Gaps = 8/365 (2%)
Query: 38 KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGY 97
+++H+ +K L ++ + KL +F + A +FD +PE I +N M +
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYL---FKGDLYGAFKVFDEMPERTIFTWNKMIKEL 161
Query: 98 SRSKTPIRAIF-LFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLN 156
+ S+ I +F LFV +++ + P++ +F +L+AC G+ A + +Q+H + GL
Sbjct: 162 A-SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLR 219
Query: 157 SNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFREL 216
+ VC LI+LY+ V+ ARR+F+ + S+ A+I+ +++ EA+ LF ++
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 217 QERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRL 276
+ PT S LS+C + SL++G+ +H + K G V AL+ ++ G L
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 277 DDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYAC 336
A +F NMS +D ++ +I + G G K++ +F+ M + PD T L+ AC
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 337 SHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPIL 396
S G + G ++ K G K G +++L + ++ A + E +++ +L
Sbjct: 400 SADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV-VL 457
Query: 397 WRTLL 401
W +L
Sbjct: 458 WNVML 462
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 4/224 (1%)
Query: 115 NSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSD 174
N G+ P+ + LL+ C +L+EG++LH +KLGL+SN + L + Y D
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNG-SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGD 135
Query: 175 VEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSS 234
+ A ++F+ + E + ++N +I A + E LF + N+ P + T L +
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 235 CALLGSL--DLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQ 292
C GS+ D+ + IH I GL V LID++++ G +D A VFD + KD
Sbjct: 196 CR-GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 293 AWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYAC 336
+W AMI + + ++I +F +M + P F +L AC
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 2/193 (1%)
Query: 216 LQERNLKPTDVTMLSALSSCALL-GSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCG 274
++ R ++P T+ L C GSLD G+ +H I K GLD ++ L D + G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 275 RLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLY 334
L A VFD M + W+ MI A+ + +F M+ V+P+E TF G+L
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 335 ACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTP 394
AC + + ++ G+ ++DL R G +D A R D L +K
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 395 ILWRTLLSSCSSH 407
W ++S S +
Sbjct: 255 S-WVAMISGLSKN 266
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 352 bits (902), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 188/544 (34%), Positives = 308/544 (56%), Gaps = 5/544 (0%)
Query: 17 LCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAH 76
+C + +L C S + L++IH+ I LQ+ ++ L+ FC + T S+ HA
Sbjct: 1 MCEKARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVS-VTGSLSHAQ 59
Query: 77 LLFDRI-PEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGL-LPDDYSFPSLLKACAC 134
LLFD +P +N + RG+S S +P+ +I + +L S + PD ++F LK+C
Sbjct: 60 LLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCER 119
Query: 135 VGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYN 194
+ +++ + ++H I+ G + V T+L+ Y+ VE A ++F+ + +VS+N
Sbjct: 120 I--KSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWN 177
Query: 195 AIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKY 254
+I ++ N+ALS+++ + + T+++ LSSCA + +L++G +H
Sbjct: 178 VMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDI 237
Query: 255 GLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMF 314
+ V V+ ALIDM+AKCG L++A+ VF+ M +D W++MI+ Y HG G ++I F
Sbjct: 238 RCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFF 297
Query: 315 EEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGR 374
+M+ + V P+ ITFLGLL CSH GLV EG +F M ++ + P +KHYGCMVDL GR
Sbjct: 298 RKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGR 357
Query: 375 AGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVIL 434
AG+L+ + I P+LWRTLL SC H NL L + ++++ +L+ + GDYV++
Sbjct: 358 AGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLM 417
Query: 435 SNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKAL 494
+++ + A + +RKL++ + VPG S IE+ + V +F D +H S + L
Sbjct: 418 TSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSEL 477
Query: 495 DELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKN 554
E++ + GY P+ S + D A HSEKLAI +GL+ T GTT+R+ KN
Sbjct: 478 GEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKN 537
Query: 555 LRVC 558
LRVC
Sbjct: 538 LRVC 541
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 351 bits (901), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 304/511 (59%), Gaps = 44/511 (8%)
Query: 89 LFNTMARGYSRS-KTPIR--AIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQ 145
L+N + R + +P R I +++ + N + PD ++FP LL + L G++
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFH--NPLHLPLGQR 83
Query: 146 LHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSS- 204
H + GL+ + +V T+L+N+Y+ C D+ +A+R+F++ + ++N+++ AYA++
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 205 ------------------------------RPNEALSLFRELQ-----ERNLKPTDVTML 229
+ EAL LFRE+Q E ++P + TM
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 230 SALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNM-SG 288
+ LS+C LG+L+ GKW+H YI KY ++ + + TALIDM+AKCG L+ A VF+ + S
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 289 KDTQAWSAMIVAYATHGQGHKSILMFEEMMKA-QVSPDEITFLGLLYACSHTGLVDEGWN 347
KD +A+SAMI A +G + +F EM + ++P+ +TF+G+L AC H GL++EG +
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 348 YFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSH 407
YF M +++GI P I+HYGCMVDL GR+G + EA FI +P++ ++W +LLS
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 408 NNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSS 467
++ + ++R+ ELD + G YV+LSN+ A+ GRW +V +R M+ +G+ KVPGCS
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 468 IEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIAL 527
+EV VV EF GD S + LDE+++ L+ GYV DT V D+ +++KEIAL
Sbjct: 444 VEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLL-DLNEKDKEIAL 502
Query: 528 RYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
YHSEKLAI F L+ T PGT +R++KNLR+C
Sbjct: 503 SYHSEKLAIAFCLMKTRPGTPVRIIKNLRIC 533
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 126/236 (53%), Gaps = 11/236 (4%)
Query: 72 MEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELL-----NSGLLPDDYSFP 126
++ A LFD +PE +++ ++ + GY A+ LF E+ + + P++++
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 127 SLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENI- 185
++L AC +GA LE+GK +H + K + ++ + T LI++YA+C +E A+R+F +
Sbjct: 204 TVLSACGRLGA--LEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 186 SEPCVVSYNAIITAYARSSRPNEALSLFRELQER-NLKPTDVTMLSALSSCALLGSLDLG 244
S+ V +Y+A+I A +E LF E+ N+ P VT + L +C G ++ G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 245 K-WIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGK-DTQAWSAMI 298
K + I+++G+ ++ ++D++ + G + +A S +M + D W +++
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 327/577 (56%), Gaps = 46/577 (7%)
Query: 21 TPNALSL---LPRCTSFRGLK---QIHAVTIKTHLQ-NDLNVLTKLINFCTQNPTTSSME 73
TPN++++ + C L+ +++A + ++ NDL +++ L++ + ++++
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL-MVSALVDMYMK---CNAID 288
Query: 74 HAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACA 133
A LFD ++ L N MA Y R A+ +F +++SG+ PD S S + +C+
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 134 CVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSY 193
+ + GK H + ++ G S +C LI++Y +C + A RIF+ +S VV++
Sbjct: 349 QL--RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 194 NAIITAYARSSRPNEALSLFRELQERNL-------------------------------- 221
N+I+ Y + + A F + E+N+
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 222 KPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVS 281
VTM+S S+C LG+LDL KWI+ YI+K G+ V++ T L+DM ++CG + A+S
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 282 VFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGL 341
+F++++ +D AW+A I A A G ++I +F++M++ + PD + F+G L ACSH GL
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 342 VDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLL 401
V +G FYSM +G+ P HYGCMVDLLGRAG L+EA + I+++P++ ++W +LL
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
Query: 402 SSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLK 461
++C N+ +A E+I L G YV+LSN+ A AGRW D+ +R MK++G+ K
Sbjct: 647 AACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRK 706
Query: 462 VPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDE 521
PG SSI++ EF SGD H +++ LDE+ + +G+VPD S V D++++
Sbjct: 707 PPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLM-DVDEK 765
Query: 522 EKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
EK L HSEKLA+ +GL+++ GTTIR+VKNLRVC
Sbjct: 766 EKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVC 802
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 223/425 (52%), Gaps = 11/425 (2%)
Query: 1 MATTPSPPITQSPPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLI 60
+ATT + + K TP++L C + LK H K L ND++ +TKL+
Sbjct: 15 LATTTTTKPSLLNQSKCTKATPSSL---KNCKTIDELKMFHRSLTKQGLDNDVSTITKLV 71
Query: 61 NFCTQNPTTSSMEHAHLLFDRIPE-PDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLL 119
+ T S+ A +F+ ++N++ RGY+ S AI LF+ ++NSG+
Sbjct: 72 ARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS 131
Query: 120 PDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAAR 179
PD Y+FP L ACA + A G Q+H +K+G +L+V +L++ YAEC ++++AR
Sbjct: 132 PDKYTFPFGLSACA--KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSAR 189
Query: 180 RIFENISEPCVVSYNAIITAYARSSRPNEALSL-FRELQERNLKPTDVTMLSALSSCALL 238
++F+ +SE VVS+ ++I YAR +A+ L FR +++ + P VTM+ +S+CA L
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 239 GSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMI 298
L+ G+ ++ +I+ G++ + +AL+DM+ KC +D A +FD + +AM
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 299 VAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWN-YFYSMRDKYG 357
Y G +++ +F MM + V PD I+ L + +CS + G + + Y +R+ +
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 358 IVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVI 417
I + ++D+ + R D A+R D + K T + W ++++ + + A +
Sbjct: 370 SWDNICN--ALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYVENGEVDAAWETF 426
Query: 418 ERIFE 422
E + E
Sbjct: 427 ETMPE 431
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 41/384 (10%)
Query: 39 QIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYS 98
QIH + +K DL V L++F + ++ A +FD + E ++V + +M GY+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAE---CGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 99 RSKTPIRAIFLFVELL-NSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNS 157
R A+ LF ++ + + P+ + ++ ACA + E LE G++++ F G+
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL--EDLETGEKVYAFIRNSGIEV 269
Query: 158 NLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQ 217
N + + L+++Y +C+ ++ A+R+F+ + NA+ + Y R EAL +F +
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 218 ERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLD 277
+ ++P ++MLSA+SSC+ L ++ GK H Y+ + G + + + ALIDM+ KC R D
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 278 DAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEM-------------------- 317
A +FD MS K W++++ Y +G+ + FE M
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 318 ----------MKAQ--VSPDEITFLGLLYACSHTGLVD-EGWNYFYSMRDKYGIVPGIKH 364
M++Q V+ D +T + + AC H G +D W Y+Y +K GI ++
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI--EKNGIQLDVRL 507
Query: 365 YGCMVDLLGRAGRLDEAYRFIDEL 388
+VD+ R G + A + L
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSL 531
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 348 bits (892), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 203/607 (33%), Positives = 316/607 (52%), Gaps = 76/607 (12%)
Query: 22 PNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDR 81
PN + ++F+ KQIH V+ + L D V + + + M A +FDR
Sbjct: 120 PNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMR---CGRMGDARKVFDR 176
Query: 82 IPEPD-----------------------------------IVLFNTMARGYSRSKTPIRA 106
+ + D IV +N + G++RS A
Sbjct: 177 MSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEA 236
Query: 107 IFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLI 166
+ +F ++ + G PD + S+L + +E L G+ +H + IK GL + V + +I
Sbjct: 237 VVMFQKIHHLGFCPDQVTVSSVLPSVG--DSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 167 NLYAECSDV-------------------------------EAARRIFENISEPC----VV 191
++Y + V + A +FE E VV
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 192 SYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYI 251
S+ +II A++ + EAL LFRE+Q +KP VT+ S L +C + +L G+ H +
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 252 KKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSI 311
+ L V V +ALIDM+AKCGR++ + VF+ M K+ W++++ ++ HG+ + +
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVM 474
Query: 312 LMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDL 371
+FE +M+ ++ PD I+F LL AC GL DEGW YF M ++YGI P ++HY CMV+L
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 372 LGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDY 431
LGRAG+L EAY I E+P + +W LL+SC NN+ LA+ E++F L+ + G Y
Sbjct: 535 LGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594
Query: 432 VILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQ 491
V+LSN+ A G W +VD +R M+ G+ K PGCS I+V N V +GD H +
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQIT 654
Query: 492 KALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRV 551
+ +DE+ KE++ G+ P+ H D+E++E+E L HSEKLA+ FGLLNTP GT ++V
Sbjct: 655 EKMDEISKEMRKSGHRPNLDFALH-DVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQV 713
Query: 552 VKNLRVC 558
+KNLR+C
Sbjct: 714 IKNLRIC 720
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 223/503 (44%), Gaps = 99/503 (19%)
Query: 39 QIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYS 98
Q HA +K+ QND + KLI + A L+ IP+P I F+++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLI---ASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 99 RSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSN 158
++K ++I +F + + GL+PD + P+L K CA + A + GKQ+HC + GL+ +
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL--SAFKVGKQIHCVSCVSGLDMD 150
Query: 159 LYVCTTLINLYAECSDVEAARRIFENIS-------------------------------- 186
+V ++ ++Y C + AR++F+ +S
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 187 ---EPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDL 243
E +VS+N I++ + RS EA+ +F+++ P VT+ S L S L++
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 244 GKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQ----------- 292
G+ IH Y+ K GL K V +A+IDM+ K G + +S+F+ +
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 293 ------------------------AWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEIT 328
+W+++I A +G+ +++ +F EM A V P+ +T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 329 FLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIK-----HYG-CMVDLLGRAGRLDEAY 382
+L AC + + G R +G + H G ++D+ + GR++ +
Sbjct: 391 IPSMLPACGNIAALGHG-------RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQ 443
Query: 383 RFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFE--LDDSHGGDYVILSNLCAR 440
+ +P K+ + W +L++ S H G AK+V+ IFE + D++ ++L +
Sbjct: 444 IVFNMMPTKNL-VCWNSLMNGFSMH---GKAKEVMS-IFESLMRTRLKPDFISFTSLLSA 498
Query: 441 AGRW----EDVDYLRKLMKDRGV 459
G+ E Y + + ++ G+
Sbjct: 499 CGQVGLTDEGWKYFKMMSEEYGI 521
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/495 (37%), Positives = 285/495 (57%), Gaps = 11/495 (2%)
Query: 64 TQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDY 123
T + ++ A LFD P D+ + M GY +++ A LF ++ ++
Sbjct: 258 TGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEV 313
Query: 124 SFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFE 183
S+ ++L V E +E K+L + N+ T+I YA+C + A+ +F+
Sbjct: 314 SWNAML--AGYVQGERMEMAKEL----FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 367
Query: 184 NISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDL 243
+ + VS+ A+I Y++S EAL LF +++ + + SALS+CA + +L+L
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 244 GKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYAT 303
GK +H + K G + V AL+ M+ KCG +++A +F M+GKD +W+ MI Y+
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487
Query: 304 HGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIK 363
HG G ++ FE M + + PD+ T + +L ACSHTGLVD+G YFY+M YG++P +
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 547
Query: 364 HYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFEL 423
HY CMVDLLGRAG L++A+ + +P + +W TLL + H N LA+ ++IF +
Sbjct: 548 HYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 607
Query: 424 DDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGV 483
+ + G YV+LSNL A +GRW DV LR M+D+GV KVPG S IE+ N F GD
Sbjct: 608 EPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEF 667
Query: 484 HSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNT 543
H ++ L+EL +K GYV TS+V H D+E+EEKE +RYHSE+LA+ +G++
Sbjct: 668 HPEKDEIFAFLEELDLRMKKAGYVSKTSVVLH-DVEEEEKERMVRYHSERLAVAYGIMRV 726
Query: 544 PPGTTIRVVKNLRVC 558
G IRV+KNLRVC
Sbjct: 727 SSGRPIRVIKNLRVC 741
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 148/340 (43%), Gaps = 69/340 (20%)
Query: 72 MEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKA 131
E A LFD +PE D+V +N M +GY R++ +A LF ++P+
Sbjct: 111 FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFE------IMPE---------- 154
Query: 132 CACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVV 191
++ T+++ YA+ V+ AR +F+ + E V
Sbjct: 155 -------------------------RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV 189
Query: 192 SYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWI---H 248
S+NA+++AY ++S+ EA LF+ + L +S LLG K I
Sbjct: 190 SWNALLSAYVQNSKMEEACMLFKSRENWAL----------VSWNCLLGGFVKKKKIVEAR 239
Query: 249 EYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGH 308
++ + V NT +I +A+ G++D+A +FD +D W+AM+ Y +
Sbjct: 240 QFFDSMNVRDVVSWNT-IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 309 KSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVP--GIKHYG 366
++ +F++M + +E+++ +L ++ ++ + ++P + +
Sbjct: 299 EARELFDKMPE----RNEVSWNAMLAGYVQGERMEMA-------KELFDVMPCRNVSTWN 347
Query: 367 CMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSS 406
M+ + G++ EA D++P K P+ W +++ S
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQ 386
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 128/270 (47%), Gaps = 18/270 (6%)
Query: 156 NSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRE 215
+S++ I+ Y A R+F+ + VSYN +I+ Y R+ A LF E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 216 LQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGR 275
+ ER+L +V + + + L + +L + + E + V ++ +A+ G
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMPE--------RDVCSWNTMLSGYAQNGC 172
Query: 276 LDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYA 335
+DDA SVFD M K+ +W+A++ AY + + ++ ++F K++ + +++ LL
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF----KSRENWALVSWNCLLGG 228
Query: 336 CSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPI 395
+ E +F SM V + + ++ ++G++DEA + DE P++
Sbjct: 229 FVKKKKIVEARQFFDSMN-----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV-F 282
Query: 396 LWRTLLSSCSSHNNLGLAKQVIERIFELDD 425
W ++S + + A+++ +++ E ++
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNE 312
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 345 bits (886), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 296/522 (56%), Gaps = 38/522 (7%)
Query: 72 MEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLL-PDDYSFPSLLK 130
M+ A F+++ E DIV +N+M G+++ +RA+ +F ++L LL PD ++ S+L
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 131 ACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARR---------- 180
ACA + E L GKQ+H + G + + V LI++Y+ C VE ARR
Sbjct: 288 ACANL--EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 181 -----------------------IFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQ 217
IF ++ + VV++ A+I Y + EA++LFR +
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 218 ERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLD 277
+P T+ + LS + L SL GK IH K G V V+ ALI M+AK G +
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 278 DAVSVFDNMS-GKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYAC 336
A FD + +DT +W++MI+A A HG +++ +FE M+ + PD IT++G+ AC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 337 SHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPIL 396
+H GLV++G YF M+D I+P + HY CMVDL GRAG L EA FI+++PI+ +
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 397 WRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKD 456
W +LLS+C H N+ L K ER+ L+ + G Y L+NL + G+WE+ +RK MKD
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 457 RGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHG 516
V K G S IEV + V F DG H ++ + ++ E+K +GYVPDT+ V H
Sbjct: 646 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLH- 704
Query: 517 DMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
D+E+E KE LR+HSEKLAI FGL++TP TT+R++KNLRVC
Sbjct: 705 DLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVC 746
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 194/449 (43%), Gaps = 77/449 (17%)
Query: 78 LFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGA 137
FD++P+ D V + TM GY +AI + +++ G+ P ++ ++L + A
Sbjct: 102 FFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVA--AT 159
Query: 138 EALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAII 197
+E GK++H F +KLGL N+ V +L+N+YA+C D A+ +F+ + + S+NA+I
Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219
Query: 198 TAYARSSRPNEALSLFRELQERN--------------------------------LKPTD 225
+ + + + A++ F ++ ER+ L P
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 226 VTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKC------------ 273
T+ S LS+CA L L +GK IH +I G D V ALI M+++C
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 274 ---------------------GRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSIL 312
G ++ A ++F ++ +D AW+AMIV Y HG ++I
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAIN 399
Query: 313 MFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLL 372
+F M+ P+ T +L S + G + K G + + ++ +
Sbjct: 400 LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHG-KQIHGSAVKSGEIYSVSVSNALITMY 458
Query: 373 GRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHG---- 428
+AG + A R D + + + W +++ + + H G A++ +E +FE G
Sbjct: 459 AKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH---GHAEEALE-LFETMLMEGLRPD 514
Query: 429 -GDYVILSNLCARAGRWEDVDYLRKLMKD 456
YV + + C AG +MKD
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 168/388 (43%), Gaps = 77/388 (19%)
Query: 120 PDDYSFPSLLKACACVGAEALEE------GKQLHCFAIKLGLNSNLYVCTTLINLYAECS 173
P S +LL+ C + +++ + + +HC IK GL ++Y+ L+N+Y++
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 174 DVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERN------------- 220
AR++F+ + S+N +++AY++ + F +L +R+
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 221 ------------------LKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKV 262
++PT T+ + L+S A ++ GK +H +I K GL V V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 263 NTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQV 322
+ +L++M+AKCG A VFD M +D +W+AMI + GQ ++ FE+M + +
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 323 SPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAY 382
WN ++ G G DL RA LD
Sbjct: 244 VT---------------------WN---------SMISGFNQRG--YDL--RA--LDIFS 267
Query: 383 RFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAG 442
+ + + + ++LS+C++ L + KQ+ I G ++L+ L +
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG--IVLNALISMYS 325
Query: 443 RWEDVDYLRKLMKDRGV--LKVPGCSSI 468
R V+ R+L++ RG LK+ G +++
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTAL 353
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 344 bits (883), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 288/487 (59%), Gaps = 6/487 (1%)
Query: 75 AHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNS--GLLPDDYSFPSLLKAC 132
A LFD +PE D+V +N++ GYS + + ++ S G P++ +F S++ AC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 133 ACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVS 192
G++ EEG+ +H +K G+ + V IN Y + D+ ++ ++FE++S +VS
Sbjct: 145 VYGGSK--EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202
Query: 193 YNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIK 252
+N +I + ++ + L+ F + +P T L+ L SC +G + L + IH I
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 253 KYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSIL 312
G + TAL+D+++K GRL+D+ +VF ++ D+ AW+AM+ AYATHG G +I
Sbjct: 263 FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 313 MFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLL 372
FE M+ +SPD +TF LL ACSH+GLV+EG +YF +M +Y I P + HY CMVDLL
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 373 GRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYV 432
GR+G L +AY I E+P++ + +W LL +C + + L + ER+FEL+ G +YV
Sbjct: 383 GRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV 442
Query: 433 ILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQK 492
+LSN+ + +G W+D +R LMK +G+++ GCS IE N + +F GD H S +QK
Sbjct: 443 MLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQK 502
Query: 493 ALDELVKELKM-VGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTIRV 551
L E+ K++K +GY T V H D+ ++ KE + HSEK+A+ FGLL P I +
Sbjct: 503 KLKEIRKKMKSEMGYKSKTEFVLH-DVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIII 561
Query: 552 VKNLRVC 558
KNLR+C
Sbjct: 562 RKNLRIC 568
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 227 TMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNM 286
++++A+ SC S++L + +H + K ++ + L+ + + G A +FD M
Sbjct: 36 SLIAAVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 287 SGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVS--PDEITFLGLLYACSHTGLVDE 344
+D +W+++I Y+ G K + MM ++V P+E+TFL ++ AC + G +E
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 345 GWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLL 401
G + + K+G++ +K ++ G+ G L + + ++L IK+ + W T++
Sbjct: 153 G-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNL-VSWNTMI 207
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 96/222 (43%), Gaps = 15/222 (6%)
Query: 25 LSLLPRCTSF---RGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDR 81
L++L C R + IH + + + + T L++ ++ +E + +F
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSK---LGRLEDSSTVFHE 295
Query: 82 IPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALE 141
I PD + + M Y+ AI F +++ G+ PD +F LL AC+ G +E
Sbjct: 296 ITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG--LVE 353
Query: 142 EGKQ-LHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENIS-EPCVVSYNAIITA 199
EGK + + ++ L + +++L ++ A + + + EP + A++ A
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Query: 200 ---YARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALL 238
Y + +A EL+ R+ + + MLS + S + L
Sbjct: 414 CRVYKDTQLGTKAAERLFELEPRDGR--NYVMLSNIYSASGL 453
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 310/572 (54%), Gaps = 35/572 (6%)
Query: 19 TNTPNALSLLPRCTSFRGL---KQIHAVTIKTHLQND-------LNVLTKLINFCTQNPT 68
TNT + CT+ + L KQ+H + + + +D +++ +KL +F +
Sbjct: 42 TNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAV 101
Query: 69 TSSME---------------------HAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAI 107
M +A +FD +P+ + +N M G + + +
Sbjct: 102 YGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGL 161
Query: 108 FLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLIN 167
LF E+ G PD+Y+ S+ A G ++ G+Q+H + IK GL +L V ++L +
Sbjct: 162 SLFREMHGLGFSPDEYTLGSVFSGSA--GLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 219
Query: 168 LYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVT 227
+Y ++ + ++ +V++N +I A++ P L L++ ++ +P +T
Sbjct: 220 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 279
Query: 228 MLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMS 287
++ LSSC+ L G+ IH K G V V ++LI M++KCG L DA F
Sbjct: 280 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 339
Query: 288 GKDTQAWSAMIVAYATHGQGHKSILMFEEMM-KAQVSPDEITFLGLLYACSHTGLVDEGW 346
+D WS+MI AY HGQG ++I +F M + + +E+ FL LLYACSH+GL D+G
Sbjct: 340 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 399
Query: 347 NYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSS 406
F M +KYG PG+KHY C+VDLLGRAG LD+A I +PIK+ ++W+TLLS+C+
Sbjct: 400 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 459
Query: 407 HNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCS 466
H N +A++V + I ++D + YV+L+N+ A A RW DV +RK M+D+ V K G S
Sbjct: 460 HKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS 519
Query: 467 SIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIA 526
E V +F GD S S ++ L EL E+K+ GY PDT+ V H DM++EEKE
Sbjct: 520 WFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLH-DMDEEEKESD 578
Query: 527 LRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 558
L HSEKLA+ F L+ P G IR++KNLRVC
Sbjct: 579 LVQHSEKLAVAFALMILPEGAPIRIIKNLRVC 610
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 339 bits (869), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/489 (35%), Positives = 287/489 (58%), Gaps = 6/489 (1%)
Query: 72 MEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYS--FPSLL 129
+E A LFD + E D + M GY + P A+ L+ + +P+ F +
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR---VPNSRPNIFTVSI 223
Query: 130 KACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPC 189
A + + GK++H ++ GL+S+ + ++L+++Y +C ++ AR IF+ I E
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 190 VVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHE 249
VVS+ ++I Y +SSR E SLF EL +P + T L++CA L + +LGK +H
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 250 YIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHK 309
Y+ + G D Y +++L+DM+ KCG ++ A V D D +W+++I A +GQ +
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDE 403
Query: 310 SILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYGCMV 369
++ F+ ++K+ PD +TF+ +L AC+H GLV++G +FYS+ +K+ + HY C+V
Sbjct: 404 ALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 370 DLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELDDSHGG 429
DLL R+GR ++ I E+P+K + LW ++L CS++ N+ LA++ + +F+++ +
Sbjct: 464 DLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPV 523
Query: 430 DYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFFSGDGVHSYSTD 489
YV ++N+ A AG+WE+ +RK M++ GV K PG S E+ F + D H
Sbjct: 524 TYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQ 583
Query: 490 LQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITFGLLNTPPGTTI 549
+ + L EL K++K GYVP TSLV H D+EDE+KE L YHSEKLA+ F +L+T GT I
Sbjct: 584 IVEFLRELRKKMKEEGYVPATSLVLH-DVEDEQKEENLVYHSEKLAVAFAILSTEEGTAI 642
Query: 550 RVVKNLRVC 558
+V KNLR C
Sbjct: 643 KVFKNLRSC 651
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 196 IITAYARSSRPNEAL------SLFRE---LQERNLKPTDVTMLSALSSCALLGSLDLGKW 246
++ R++R EA+ L RE L R KP T + + C+ +L+ GK
Sbjct: 47 VVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKK 106
Query: 247 IHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQ 306
+HE+I+ G + + L+ M+AKCG L DA VFD M +D +W+ M+ YA G
Sbjct: 107 VHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGL 166
Query: 307 GHKSILMFEEM 317
++ +F+EM
Sbjct: 167 LEEARKLFDEM 177
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 48/213 (22%)
Query: 38 KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGY 97
KQ+H + + L++ T+ S +H + D P+PD+V + ++ G
Sbjct: 339 KQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH---VVDGCPKPDLVSWTSLIGGC 395
Query: 98 SRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNS 157
+++ P A+ F LL SG PD +F ++L AC G
Sbjct: 396 AQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL-------------------- 435
Query: 158 NLYVCTTLINLYAECSDVEAARRIFENISEPCVVS-----YNAIITAYARSSRPNEALSL 212
VE F +I+E +S Y ++ ARS R + S+
Sbjct: 436 -----------------VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSV 478
Query: 213 FRELQERNLKPTDVTMLSALSSCALLGSLDLGK 245
E+ +KP+ S L C+ G++DL +
Sbjct: 479 ISEMP---MKPSKFLWASVLGGCSTYGNIDLAE 508
Score = 39.3 bits (90), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 307 GHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPGIKHYG 366
G K + +++ P T+ L+ CS T ++EG +R G VPGI +
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTS-GFVPGIVIWN 124
Query: 367 CMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIFELD 424
++ + + G L +A + DE+P + W +++ + L A+++ + + E D
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDL-CSWNVMVNGYAEVGLLEEARKLFDEMTEKD 181
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 338 bits (866), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 263/441 (59%), Gaps = 33/441 (7%)
Query: 72 MEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKA 131
ME+A +FD P D+V +N + GY + +AI+++ + + G+ PDD + L+ +
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
Query: 132 CACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVV 191
C+ +G L GK+ + + + GL + + L++++++C D+ ARRIF+N+ + +V
Sbjct: 267 CSMLGD--LNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 192 SYNAIITAYAR-------------------------------SSRPNEALSLFRELQERN 220
S+ +I+ YAR + R +AL+LF+E+Q N
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 221 LKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAV 280
KP ++TM+ LS+C+ LG+LD+G WIH YI+KY L V + T+L+DM+AKCG + +A+
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 281 SVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTG 340
SVF + +++ ++A+I A HG +I F EM+ A ++PDEITF+GLL AC H G
Sbjct: 445 SVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 504
Query: 341 LVDEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTL 400
++ G +YF M+ ++ + P +KHY MVDLLGRAG L+EA R ++ +P+++ +W L
Sbjct: 505 MIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGAL 564
Query: 401 LSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVL 460
L C H N+ L ++ +++ ELD S G YV+L + A WED R++M +RGV
Sbjct: 565 LFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
Query: 461 KVPGCSSIEVNNVVREFFSGD 481
K+PGCSSIEVN +V EF D
Sbjct: 625 KIPGCSSIEVNGIVCEFIVRD 645
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 204/409 (49%), Gaps = 41/409 (10%)
Query: 8 PITQSPPPKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNP 67
PI + + P LSLL +C LKQI A I L D ++LI FC +
Sbjct: 41 PINWNSTHSFVLHNP-LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE 99
Query: 68 TTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLL---PDDYS 124
+ ++++ + I P+I +N RG+S S+ P + L+ ++L G PD ++
Sbjct: 100 SRY-LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFT 158
Query: 125 FPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFEN 184
+P L K CA + +L H ++L L S+++ + I+++A C D+E AR++F+
Sbjct: 159 YPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNAS--IHMFASCGDMENARKVFDE 216
Query: 185 ISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLG 244
+VS+N +I Y + +A+ +++ ++ +KP DVTM+ +SSC++LG L+ G
Sbjct: 217 SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 245 KWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATH 304
K +EY+K+ GL + + AL+DM +KCG + +A +FDN+ + +W+ MI YA
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 305 G-------------------------------QGHKSILMFEEMMKAQVSPDEITFLGLL 333
G +G ++ +F+EM + PDEIT + L
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 334 YACSHTGLVDEG-WNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEA 381
ACS G +D G W + Y +KY + + +VD+ + G + EA
Sbjct: 397 SACSQLGALDVGIWIHRYI--EKYSLSLNVALGTSLVDMYAKCGNISEA 443
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 12/303 (3%)
Query: 127 SLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYA--ECSDVEAARRIFEN 184
SLL+ C + L KQ+ I GL + + + LI A E ++ + +I +
Sbjct: 58 SLLEKC-----KLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKG 112
Query: 185 ISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNL---KPTDVTMLSALSSCALLGSL 241
I P + S+N I ++ S P E+ L++++ +P T CA L
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 242 DLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAY 301
LG I ++ K L+ V+ A I M A CG +++A VFD +D +W+ +I Y
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 302 ATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYGIVPG 361
G+ K+I +++ M V PD++T +GL+ +CS G ++ G FY + G+
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG-KEFYEYVKENGLRMT 291
Query: 362 IKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIERIF 421
I ++D+ + G + EA R D L K T + W T++S + L +++++ + +
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISGYARCGLLDVSRKLFDDME 350
Query: 422 ELD 424
E D
Sbjct: 351 EKD 353
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 40 IHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYSR 99
IH K L ++ + T L++ + ++ A +F I + + + + G +
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAK---CGNISEALSVFHGIQTRNSLTYTAIIGGLAL 467
Query: 100 SKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNL 159
AI F E++++G+ PD+ +F LL AC C G + LN L
Sbjct: 468 HGDASTAISYFNEMIDAGIAPDEITFIGLLSAC-CHGGMIQTGRDYFSQMKSRFNLNPQL 526
Query: 160 YVCTTLINLYAECSDVEAARRIFENI 185
+ +++L +E A R+ E++
Sbjct: 527 KHYSIMVDLLGRAGLLEEADRLMESM 552
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/500 (37%), Positives = 283/500 (56%), Gaps = 16/500 (3%)
Query: 70 SSMEHAHL----------LFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLL 119
+SM H +L LF ++P +++ + TM G +++ A+ LF +L +
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 120 PDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAAR 179
F ++ ACA A A G Q+H IKLG YV +LI YA C + +R
Sbjct: 223 STSRPFTCVITACA--NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 180 RIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLG 239
++F+ V + A+++ Y+ + + +ALS+F + ++ P T S L+SC+ LG
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 240 SLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIV 299
+LD GK +H K GL+ V +L+ M++ G ++DAVSVF + K +W+++IV
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400
Query: 300 AYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLVDEGWNYFYSMRDKYG-I 358
A HG+G + ++F +M++ PDEITF GLL ACSH G +++G FY M I
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHI 460
Query: 359 VPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLGLAKQVIE 418
I+HY CMVD+LGR G+L EA I+ + +K ++W LLS+C H+++ ++
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAA 520
Query: 419 RIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRGVLKVPGCSSIEVNNVVREFF 478
IF LD YV+LSN+ A AGRW +V LR MK G++K PG S + + EFF
Sbjct: 521 AIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFF 580
Query: 479 SGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDMEDEEKEIALRYHSEKLAITF 538
SGD H + + + L+ L ++LK +GY PD H D+EDE+KE L YHSE+LAI F
Sbjct: 581 SGDQPH--CSRIYEKLEFLREKLKELGYAPDYRSALH-DVEDEQKEEMLWYHSERLAIAF 637
Query: 539 GLLNTPPGTTIRVVKNLRVC 558
GL+NT G+ + V+KNLRVC
Sbjct: 638 GLINTVEGSAVTVMKNLRVC 657
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 170/382 (44%), Gaps = 39/382 (10%)
Query: 72 MEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKA 131
++ A +F+++P P + L+ M GY+RS + A+ LF E+ + D S+ S++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMP----VRDVVSWNSMISG 106
Query: 132 C-------------------ACVGAEALEEGKQLHCF-AIKLGLNSNLY---------VC 162
C + V A+ G CF + K+ L+
Sbjct: 107 CVECGDMNTAVKLFDEMPERSVVSWTAMVNG----CFRSGKVDQAERLFYQMPVKDTAAW 162
Query: 163 TTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLK 222
++++ Y + V+ A ++F+ + V+S+ +I ++ R EAL LF+ + +K
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 223 PTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSV 282
T +++CA + +G +H I K G V+ +LI +A C R+ D+ V
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 283 FDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSHTGLV 342
FD + W+A++ Y+ + + ++ +F M++ + P++ TF L +CS G +
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL 342
Query: 343 DEGWNYFYSMRDKYGIVPGIKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLS 402
D G + + K G+ +V + +G +++A ++ K + + W +++
Sbjct: 343 DWG-KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIV 400
Query: 403 SCSSHNNLGLAKQVIERIFELD 424
C+ H A + ++ L+
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLN 422
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 143 GKQLHCFAIKLGL-NSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYA 201
GK F++ + N + +C L++ ++ AR +F + P V Y +IT Y
Sbjct: 23 GKCYRSFSVTVEFQNREVLICNHLLS-----RRIDEAREVFNQVPSPHVSLYTKMITGYT 77
Query: 202 RSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVK 261
RS+R +AL+LF E+ R++ V+ S +S C G ++ + + + + + +
Sbjct: 78 RSNRLVDALNLFDEMPVRDV----VSWNSMISGCVECGDMNTAVKLFDEMPERSVVSW-- 131
Query: 262 VNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYATHGQGHKSILMFEEM 317
TA+++ + G++D A +F M KDT AW++M+ Y G+ ++ +F++M
Sbjct: 132 --TAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQM 185
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 45/264 (17%)
Query: 20 NTPNALSLLPRCTSFRGL---KQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAH 76
N S L C++ L K++H V +K L+ D V L+ + ++ A
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLV---VMYSDSGNVNDAV 381
Query: 77 LLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVG 136
+F +I + IV +N++ G ++ A +F +++ PD+ +F LL AC+ G
Sbjct: 382 SVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCG 441
Query: 137 AEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAI 196
LE+G++L Y ++ IN R+I Y +
Sbjct: 442 --FLEKGRKL------------FYYMSSGIN--------HIDRKI---------QHYTCM 470
Query: 197 ITAYARSSRPNEALSLFRELQERN-LKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYG 255
+ R + EA EL ER +KP ++ L+ LS+C + +D G+ I +
Sbjct: 471 VDILGRCGKLKEA----EELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAI--FN 524
Query: 256 LD-KYVKVNTALIDMHAKCGRLDD 278
LD K L +++A GR +
Sbjct: 525 LDSKSSAAYVLLSNIYASAGRWSN 548
Score = 36.6 bits (83), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 296 AMIVAYATHGQGHKSILMFEEMMKAQVSPDEITFLGLLYACSH--TGLVDEGWNYFYSMR 353
A +++ HG+ ++S + E +V C+H + +DE R
Sbjct: 14 AFSISHVIHGKCYRSFSVTVEFQNREV-----------LICNHLLSRRIDEA-------R 55
Query: 354 DKYGIVPG--IKHYGCMVDLLGRAGRLDEAYRFIDELPIKSTPILWRTLLSSCSSHNNLG 411
+ + VP + Y M+ R+ RL +A DE+P++ + W +++S C ++
Sbjct: 56 EVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV-VSWNSMISGCVECGDMN 114
Query: 412 LAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYL 450
A ++ + E+ + + + N C R+G+ + + L
Sbjct: 115 TAVKLFD---EMPERSVVSWTAMVNGCFRSGKVDQAERL 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,338,803
Number of Sequences: 539616
Number of extensions: 9107601
Number of successful extensions: 32884
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 26042
Number of HSP's gapped (non-prelim): 2037
length of query: 558
length of database: 191,569,459
effective HSP length: 123
effective length of query: 435
effective length of database: 125,196,691
effective search space: 54460560585
effective search space used: 54460560585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)