BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036006
VALPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFV
RLQHLEIWGCPVLEEIIIVDQEKRNNNIVMFPQLQYLKMYDLKKLTSFCTRDVHIIKFPS
LRKLWISRCPEFM

High Scoring Gene Products

Symbol, full name Information P value
AT1G62630 protein from Arabidopsis thaliana 5.1e-06
AT1G63360 protein from Arabidopsis thaliana 8.2e-06
RPS2
AT4G26090
protein from Arabidopsis thaliana 8.5e-06
AT1G12290 protein from Arabidopsis thaliana 8.4e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036006
        (133 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2203881 - symbol:AT1G62630 species:3702 "Arabi...   118  5.1e-06   1
TAIR|locus:2031356 - symbol:AT1G63360 species:3702 "Arabi...   116  8.2e-06   1
TAIR|locus:2005517 - symbol:RPS2 "RESISTANT TO P. SYRINGA...   116  8.5e-06   1
TAIR|locus:2034765 - symbol:AT1G12290 species:3702 "Arabi...    92  8.4e-05   2


>TAIR|locus:2203881 [details] [associations]
            symbol:AT1G62630 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
            GO:GO:0043531 EMBL:AC007190 InterPro:IPR025875 Pfam:PF12799
            EMBL:AC005698 EMBL:U97220 IPI:IPI00529535 PIR:H96651
            RefSeq:NP_176451.1 UniGene:At.52327 ProteinModelPortal:Q9SI85
            SMR:Q9SI85 PaxDb:Q9SI85 PRIDE:Q9SI85 EnsemblPlants:AT1G62630.1
            GeneID:842560 KEGG:ath:AT1G62630 TAIR:At1g62630 eggNOG:NOG277177
            HOGENOM:HOG000238348 InParanoid:Q9SI85 OMA:WKHLMED PhylomeDB:Q9SI85
            ProtClustDB:CLSN2682331 Genevestigator:Q9SI85 GermOnline:AT1G62630
            Uniprot:Q9SI85
        Length = 893

 Score = 118 (46.6 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 37/132 (28%), Positives = 60/132 (45%)

Query:     1 VALPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCXXXXXXXXXXXXV 60
             V+  KL   E+   ++  I    +    C   +L+ +T+Y C  LR              
Sbjct:   714 VSTDKLREFEIMCCSISEIKMGGI----CNFLSLVDVTIYNCEGLR-----ELTFLIFAP 764

Query:    61 RLQHLEIWGCPVLEEIIIVDQ--EKRNNNIVMFPQLQYLKMYDLKKLTSFCTRDVHIIKF 118
             +L+ L +     LE+II  ++  E  ++ IV FP+L+YL + DL KL +   R    + F
Sbjct:   765 KLRSLSVVDAKDLEDIINEEKACEGEDSGIVPFPELKYLNLDDLPKLKNIYRRP---LPF 821

Query:   119 PSLRKLWISRCP 130
               L K+ I  CP
Sbjct:   822 LCLEKITIGECP 833


>TAIR|locus:2031356 [details] [associations]
            symbol:AT1G63360 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
            GO:GO:0043531 EMBL:AC022355 EMBL:AC008047 eggNOG:NOG277177
            HOGENOM:HOG000238348 ProtClustDB:CLSN2682331 IPI:IPI00530317
            PIR:F96659 RefSeq:NP_176525.1 UniGene:At.66085
            ProteinModelPortal:Q9SH22 SMR:Q9SH22 PaxDb:Q9SH22 PRIDE:Q9SH22
            EnsemblPlants:AT1G63360.1 GeneID:842642 KEGG:ath:AT1G63360
            TAIR:At1g63360 InParanoid:Q9SH22 OMA:ARDETIN PhylomeDB:Q9SH22
            Genevestigator:Q9SH22 GermOnline:AT1G63360 Uniprot:Q9SH22
        Length = 884

 Score = 116 (45.9 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 33/134 (24%), Positives = 63/134 (47%)

Query:     1 VALPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCXXXXXXXXXXXXV 60
             V+  KL   +++S ++  I    +    C   +L+ + ++ C  LR              
Sbjct:   712 VSTDKLREFQIKSCSISEIKMGGI----CNFLSLVDVNIFNCEGLR-----ELTFLIFAP 762

Query:    61 RLQHLEIWGCPVLEEIIIVDQ--EKRNNNIVMFPQLQYLKMYDLKKLTSF--------CT 110
             +++ L +W    LE+II  ++  E   + I+ FP+L +L ++DL KL           C 
Sbjct:   763 KIRSLSVWHAKDLEDIINEEKACEGEESGILPFPELNFLTLHDLPKLKKIYWRPLPFLCL 822

Query:   111 RDVHIIKFPSLRKL 124
              +++I + P+LRKL
Sbjct:   823 EEINIRECPNLRKL 836


>TAIR|locus:2005517 [details] [associations]
            symbol:RPS2 "RESISTANT TO P. SYRINGAE 2" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006952 "defense response" evidence=ISS;TAS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0043531 "ADP binding" evidence=IEA] [GO:0009626 "plant-type
            hypersensitive response" evidence=IMP] [GO:0016045 "detection of
            bacterium" evidence=RCA;IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
            [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612 "protein
            targeting to membrane" evidence=RCA] [GO:0009595 "detection of
            biotic stimulus" evidence=RCA] [GO:0009617 "response to bacterium"
            evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
            evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
            acid mediated signaling pathway" evidence=RCA] [GO:0009863
            "salicylic acid mediated signaling pathway" evidence=RCA]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=RCA] [GO:0009963 "positive regulation of flavonoid
            biosynthetic process" evidence=RCA] [GO:0010200 "response to
            chitin" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0031347
            "regulation of defense response" evidence=RCA] [GO:0031348
            "negative regulation of defense response" evidence=RCA] [GO:0043069
            "negative regulation of programmed cell death" evidence=RCA]
            [GO:0043900 "regulation of multi-organism process" evidence=RCA]
            [GO:0045087 "innate immune response" evidence=RCA] [GO:0050776
            "regulation of immune response" evidence=RCA] [GO:0050832 "defense
            response to fungus" evidence=RCA] [GO:0051707 "response to other
            organism" evidence=RCA] InterPro:IPR000767 InterPro:IPR002182
            InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 SMART:SM00382
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0016045
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161564 GO:GO:0042742
            eggNOG:COG4886 GO:GO:0043531 EMBL:AL049483 GO:GO:0009626
            GO:GO:0017111 UniGene:At.46720 UniGene:At.69675 EMBL:U14158
            EMBL:U12860 EMBL:AF368301 EMBL:AF487797 EMBL:AF487798 EMBL:AF487799
            EMBL:AF487800 EMBL:AF487801 EMBL:AF487802 EMBL:AF487803
            EMBL:AF487804 EMBL:AF487805 EMBL:AF487806 EMBL:AF487807
            EMBL:AF487808 EMBL:AF487809 EMBL:AF487810 EMBL:AF487811
            EMBL:AF487812 EMBL:AF487813 EMBL:AF487814 EMBL:AF487815
            EMBL:AF487816 EMBL:AF487817 EMBL:AF487818 EMBL:AF487819
            EMBL:AF487820 EMBL:AF487821 EMBL:AF487822 EMBL:AF487823
            EMBL:AK117214 EMBL:BT005972 EMBL:U97217 IPI:IPI00547830 PIR:A54809
            RefSeq:NP_194339.1 UniGene:At.75226 PDB:2FT5 PDBsum:2FT5
            ProteinModelPortal:Q42484 SMR:Q42484 DIP:DIP-53465N IntAct:Q42484
            STRING:Q42484 EnsemblPlants:AT4G26090.1 GeneID:828715
            KEGG:ath:AT4G26090 TAIR:At4g26090 InParanoid:Q42484 KO:K13459
            OMA:AFNNDLE PhylomeDB:Q42484 ProtClustDB:CLSN2685902
            Genevestigator:Q42484 GermOnline:AT4G26090 Uniprot:Q42484
        Length = 909

 Score = 116 (45.9 bits), Expect = 8.5e-06, P = 8.5e-06
 Identities = 36/129 (27%), Positives = 60/129 (46%)

Query:     3 LPKLENLELRSI-NVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCXXXXXXXXXXXXVR 61
             LP LE L L S+ N+ R+W N VS   C ++N+  + +  C  L+              +
Sbjct:   744 LPSLEVLTLHSLHNLTRVWGNSVSQ-DC-LRNIRCINISHCNKLK-----NVSWVQKLPK 796

Query:    62 LQHLEIWGCPVLEEIIIVDQEKRNNNIVMFPQLQYLKMYDLKKLTSFCTRDVHIIKFPSL 121
             L+ +E++ C  +EE+I   +     +  +FP L+ L+  DL +L S          F  +
Sbjct:   797 LEVIELFDCREIEELISEHESPSVEDPTLFPSLKTLRTRDLPELNSILPSR---FSFQKV 853

Query:   122 RKLWISRCP 130
               L I+ CP
Sbjct:   854 ETLVITNCP 862


>TAIR|locus:2034765 [details] [associations]
            symbol:AT1G12290 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            [GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
            GO:GO:0043531 EMBL:AC025416 HOGENOM:HOG000238348
            ProtClustDB:CLSN2682239 IPI:IPI00516844 RefSeq:NP_172693.1
            UniGene:At.42082 ProteinModelPortal:P60839 SMR:P60839
            EnsemblPlants:AT1G12290.1 GeneID:837783 KEGG:ath:AT1G12290
            TAIR:At1g12290 eggNOG:NOG274408 InParanoid:P60839 OMA:NIEERES
            PhylomeDB:P60839 ArrayExpress:P60839 Genevestigator:P60839
            GermOnline:AT1G12290 Uniprot:P60839
        Length = 884

 Score = 92 (37.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
 Identities = 25/70 (35%), Positives = 40/70 (57%)

Query:    62 LQHLEIWGCPVLEEIIIVDQEKRNN-NIVMFPQLQYLKMYDLKKLTSFCTRDVHIIKFPS 120
             L HL +W    +EEII   QEK +  +IV F +L+YL ++DL +L S        + FP 
Sbjct:   765 LTHLNVWNSRQIEEII--SQEKASTADIVPFRKLEYLHLWDLPELKSIYWNP---LPFPC 819

Query:   121 LRKLWI-SRC 129
             L ++ + ++C
Sbjct:   820 LNQINVQNKC 829

 Score = 38 (18.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query:     3 LPKLENLELRSINVERIWQNQVSALSC 29
             L +LENLE+  + +E I  + +  L C
Sbjct:   657 LERLENLEV--LTIEIISSSALEQLLC 681


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.141   0.450    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      133       121   0.00091  102 3  11 22  0.41    30
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  139 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.10u 0.13s 11.23t   Elapsed:  00:00:01
  Total cpu time:  11.10u 0.13s 11.23t   Elapsed:  00:00:01
  Start:  Mon May 20 21:42:14 2013   End:  Mon May 20 21:42:15 2013

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