BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036006
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SH22|DRL20_ARATH Probable disease resistance protein At1g63360 OS=Arabidopsis
thaliana GN=At1g63360 PE=2 SV=1
Length = 884
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 21/135 (15%)
Query: 1 VALPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFV 60
V+ KL +++S ++ I + C +L+ + ++ C LR L+ IF
Sbjct: 712 VSTDKLREFQIKSCSISEIKMGGI----CNFLSLVDVNIFNCEGLR------ELTFLIFA 761
Query: 61 -RLQHLEIWGCPVLEEIIIVDQ--EKRNNNIVMFPQLQYLKMYDLKKLTS--------FC 109
+++ L +W LE+II ++ E + I+ FP+L +L ++DL KL C
Sbjct: 762 PKIRSLSVWHAKDLEDIINEEKACEGEESGILPFPELNFLTLHDLPKLKKIYWRPLPFLC 821
Query: 110 TRDVHIIKFPSLRKL 124
+++I + P+LRKL
Sbjct: 822 LEEINIRECPNLRKL 836
>sp|Q9SI85|DRL14_ARATH Probable disease resistance protein At1g62630 OS=Arabidopsis
thaliana GN=At1g62630 PE=3 SV=2
Length = 893
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 1 VALPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFV 60
V+ KL E+ ++ I + C +L+ +T+Y C LR L+ IF
Sbjct: 714 VSTDKLREFEIMCCSISEIKMGGI----CNFLSLVDVTIYNCEGLR------ELTFLIFA 763
Query: 61 -RLQHLEIWGCPVLEEIIIVDQ--EKRNNNIVMFPQLQYLKMYDLKKLTSFCTRDVHIIK 117
+L+ L + LE+II ++ E ++ IV FP+L+YL + DL KL + R +
Sbjct: 764 PKLRSLSVVDAKDLEDIINEEKACEGEDSGIVPFPELKYLNLDDLPKLKNIYRRP---LP 820
Query: 118 FPSLRKLWISRCP 130
F L K+ I CP
Sbjct: 821 FLCLEKITIGECP 833
>sp|Q42484|RPS2_ARATH Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2
PE=1 SV=1
Length = 909
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 3 LPKLENLELRSI-NVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSS--SILSNSIF 59
LP LE L L S+ N+ R+W N VS Q+ + RN+RC+ S + L N +
Sbjct: 744 LPSLEVLTLHSLHNLTRVWGNSVS------QDCL-------RNIRCINISHCNKLKNVSW 790
Query: 60 V----RLQHLEIWGCPVLEEIIIVDQEKRNNNIVMFPQLQYLKMYDLKKLTSFCTRDVHI 115
V +L+ +E++ C +EE+I + + +FP L+ L+ DL +L S
Sbjct: 791 VQKLPKLEVIELFDCREIEELISEHESPSVEDPTLFPSLKTLRTRDLPELNSILPSR--- 847
Query: 116 IKFPSLRKLWISRCP 130
F + L I+ CP
Sbjct: 848 FSFQKVETLVITNCP 862
>sp|O81825|DRL28_ARATH Probable disease resistance protein At4g27220 OS=Arabidopsis
thaliana GN=At4g27220 PE=2 SV=1
Length = 919
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 3 LPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFVRL 62
P LE L L ++N+E I + L +Q L L + CR L+ LFS IL+ ++ L
Sbjct: 767 FPNLEELSLDNVNLESIGELN-GFLGMRLQKLKLLQVSGCRQLKRLFSDQILAGTL-PNL 824
Query: 63 QHLEIWGCPVLEEI-----IIVDQEKRNNNIVMFPQLQYLKMYDLKKLTSFCTRDVHIIK 117
Q +++ C LEE+ + VD + + P+L +K+ L +L S C V +
Sbjct: 825 QEIKVVSCLRLEELFNFSSVPVDFCAES----LLPKLTVIKLKYLPQLRSLCNDRVVL-- 878
Query: 118 FPSLRKLWISRC 129
SL L + C
Sbjct: 879 -ESLEHLEVESC 889
>sp|Q9C8T9|DRL19_ARATH Putative disease resistance protein At1g63350 OS=Arabidopsis
thaliana GN=At1g63350 PE=2 SV=1
Length = 898
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 29 CGVQNLIHLTLYKCRNLRCLFSSSILSNSIFVRLQHLEIWGCPVLEEIIIVDQ--EKRNN 86
C +LI + L CR LR L N L+ L + LE+II ++ + +
Sbjct: 732 CSFSSLIEVNLSNCRRLRELTFLMFAPN-----LKRLHVVSSNQLEDIINKEKAHDGEKS 786
Query: 87 NIVMFPQLQYLKMYDLKKLTSF--------CTRDVHIIKFPSLRKL 124
IV FP+L L +Y+L++L + C ++++ P+L+KL
Sbjct: 787 GIVPFPKLNELHLYNLRELKNIYWSPLPFPCLEKINVMGCPNLKKL 832
>sp|P60839|DRL2_ARATH Probable disease resistance protein At1g12290 OS=Arabidopsis
thaliana GN=At1g12290 PE=2 SV=1
Length = 884
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 62 LQHLEIWGCPVLEEIIIVDQEKRNN-NIVMFPQLQYLKMYDLKKLTSF 108
L HL +W +EEII QEK + +IV F +L+YL ++DL +L S
Sbjct: 765 LTHLNVWNSRQIEEII--SQEKASTADIVPFRKLEYLHLWDLPELKSI 810
>sp|A7MJU1|CCA_CROS8 Multifunctional CCA protein OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=cca PE=3 SV=1
Length = 415
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 7 ENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLF 49
EN EL + ER+W+ SAL+ + L L++C L+ LF
Sbjct: 165 ENGELEHLTAERVWKETESALTTRNPQIYFLMLHECGALKVLF 207
>sp|Q8LF09|FDL23_ARATH F-box/FBD/LRR-repeat protein At4g00160 OS=Arabidopsis thaliana
GN=At4g00160 PE=2 SV=2
Length = 453
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 69 GCPVLEEIIIVDQEKRNNNIVMF-----PQLQYLKMYDLKKLTSFCTRDVHIIKFPSLRK 123
GCP+LEE++++ E +++I +F P L+ L + D F ++I PSL+
Sbjct: 190 GCPILEELLVIRGE--DSDIEVFTIDEVPSLKRLTINDDHDGQEFWG---YVINAPSLKY 244
Query: 124 LWIS--RCPEF 132
L I RCP F
Sbjct: 245 LLIEDLRCPGF 255
>sp|P60838|DRL1_ARATH Probable disease resistance protein At1g12280 OS=Arabidopsis
thaliana GN=At1g12280 PE=3 SV=1
Length = 894
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 62 LQHLEIWGCPVLEEIIIVDQEKRNNNIVMFPQLQYLKMYDLKKLTSF--------CTRDV 113
L LE+ ++E II ++ + I+ F +L+ L++++L L S C + +
Sbjct: 770 LTSLEVLDSELVEGIINQEKAMTMSGIIPFQKLESLRLHNLAMLRSIYWQPLSFPCLKTI 829
Query: 114 HIIKFPSLRKL 124
HI K P LRKL
Sbjct: 830 HITKCPELRKL 840
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 32 QNLIHLTLYKCRNLRCLFSSSILSNSIFVRLQHLEIWGCPVLEEIIIVDQEKR---NNNI 88
QN+ +T+++C LR L + +L+ L L + CP +EE+I D+ N +
Sbjct: 721 QNIRTMTIHRCEYLRDL-TWLLLAPC----LGELSVSECPQMEEVISKDKAMAKLGNTSE 775
Query: 89 VMFPQLQYLKMYDLKKLTSFCTRDVHIIKFPSLRKLWISRCPEF 132
F L L + L KL S + FP L L I RCPE
Sbjct: 776 QPFQNLTKLVLDGLPKLESIYWTP---LPFPVLEYLVIRRCPEL 816
>sp|Q8VZC7|DRL36_ARATH Probable disease resistance protein At5g45510 OS=Arabidopsis
thaliana GN=At5g45510 PE=1 SV=2
Length = 1222
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 3 LPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFVRL 62
L KL++L+ +ER+ Q SA++ + +L L L C LR L S LS L
Sbjct: 783 LTKLQHLDFSGSQIERLPIFQDSAVAAKLHSLTRLLLRNCSKLRRLPSLKPLSG-----L 837
Query: 63 QHLEIWGCPVLEEIIIVDQEKR------NNNIVMFPQLQYLKMYDLKKLTSFCTRD-VHI 115
Q L++ G L E++ V E + N + +L + DL L RD +++
Sbjct: 838 QILDLSGTTSLVEMLEVCFEDKLELKTLNLSGTNLSELA-TTIEDLSSLNELLLRDCINL 896
Query: 116 IKFPSLRKL 124
P++ KL
Sbjct: 897 DAIPNIEKL 905
>sp|Q9FM87|FBD26_ARATH Putative FBD-associated F-box protein At5g56440 OS=Arabidopsis
thaliana GN=At5g56440 PE=4 SV=1
Length = 430
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 10/61 (16%)
Query: 69 GCPVLEEIIIVDQEKRNNNIVMF----PQLQYLKMYDLKKLTSFCTRDVH-IIKFPSLRK 123
GCPVLE +I++ +RN+N+ F P LQ L D + + DV +IK PSL+
Sbjct: 175 GCPVLEGLILI---RRNDNVKNFTIAAPSLQRLIAIDCR--SQVPGDDVGFVIKAPSLKS 229
Query: 124 L 124
L
Sbjct: 230 L 230
>sp|Q9FJU2|FBD37_ARATH Putative FBD-associated F-box protein At5g56700 OS=Arabidopsis
thaliana GN=At5g56700 PE=2 SV=2
Length = 398
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 70 CPVLEEIIIVDQEKRNNN--IVMFPQLQYLKMYDLKKLTSFCTRDVHIIKFPSLR 122
CPVLE++ IV ++ N +V+ P LQ L + ++ C+ D ++I PSL+
Sbjct: 174 CPVLEDLSIVREDYDNLRALVVIVPSLQRLSL----EIPGNCSSDGYVIVTPSLK 224
>sp|P0DI18|DRL45_ARATH Probable disease resistance protein RDL6 OS=Arabidopsis thaliana
GN=RDL6 PE=2 SV=1
Length = 1049
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 2 ALPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFVR 61
P+L+ L ++ + W+ + S++ L L + CR L+ L + S+ +
Sbjct: 824 GFPQLQKLSIKGLEEWEDWKVEESSMPV----LHTLDIRDCRKLKQLPDEHLPSHLTSIS 879
Query: 62 LQH--LEIWGCPVLEEIIIVDQ-----EKRNNNIVM-----FPQLQYLKMYDLKKLTSFC 109
L LE P LE ++ + + + I++ FPQL LK+ +L L +
Sbjct: 880 LFFCCLEEDPMPTLERLVHLKELQLLFRSFSGRIMVCAGSGFPQLHKLKLSELDGLEEWI 939
Query: 110 TRDVHIIKFPSLRKLWISRCPEF 132
D + P L L I RCP+
Sbjct: 940 VEDGSM---PQLHTLEIRRCPKL 959
>sp|P0DI17|DRL11_ARATH Probable disease resistance protein RF9 OS=Arabidopsis thaliana
GN=RF9 PE=2 SV=1
Length = 1049
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 2 ALPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFVR 61
P+L+ L ++ + W+ + S++ L L + CR L+ L + S+ +
Sbjct: 824 GFPQLQKLSIKGLEEWEDWKVEESSMPV----LHTLDIRDCRKLKQLPDEHLPSHLTSIS 879
Query: 62 LQH--LEIWGCPVLEEIIIVDQ-----EKRNNNIVM-----FPQLQYLKMYDLKKLTSFC 109
L LE P LE ++ + + + I++ FPQL LK+ +L L +
Sbjct: 880 LFFCCLEEDPMPTLERLVHLKELQLLFRSFSGRIMVCAGSGFPQLHKLKLSELDGLEEWI 939
Query: 110 TRDVHIIKFPSLRKLWISRCPEF 132
D + P L L I RCP+
Sbjct: 940 VEDGSM---PQLHTLEIRRCPKL 959
>sp|C4K4K4|DNLJ_HAMD5 DNA ligase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum
(strain 5AT) GN=ligA PE=3 SV=1
Length = 702
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 15 NVERIWQNQVSALSCGVQNL-IHLTLYKCRNLRC----LFSSSILSNSIFVRLQHLEIWG 69
N E+I+ N +A + ++ L H+T + N C L +L S RL L+ WG
Sbjct: 217 NHEKIFSNPRNAAAGSLRQLDPHITAQRPLNFFCYGVGLLEGGVLPQSHIQRLMQLKAWG 276
Query: 70 CPVLEEIII 78
PV + I +
Sbjct: 277 LPVHDRITL 285
>sp|O82484|DRL23_ARATH Putative disease resistance protein At4g10780 OS=Arabidopsis
thaliana GN=At4g10780 PE=2 SV=1
Length = 892
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 8 NLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFVRLQHLEI 67
N E+ I +ER+ N C NL + ++ C +L+ L N ++ ++ LE
Sbjct: 718 NCEISEIEIERLTWNTNPTSPCFF-NLSQVIIHVCSSLKDLTWLLFAPNITYLMIEQLE- 775
Query: 68 WGCPVLEEII-------IVDQEKRN-NNIVMFPQLQYLKMYDLKKLTSFCTRDVHIIKFP 119
L+E+I + ++E++ + I+ F +LQ L + L +L S + FP
Sbjct: 776 ----QLQELISHAKATGVTEEEQQQLHKIIPFQKLQILHLSSLPELKSIYWIS---LSFP 828
Query: 120 SLRKLWISRCPEF 132
L +++ RCP+
Sbjct: 829 CLSGIYVERCPKL 841
>sp|Q8H1R7|FDL27_ARATH F-box/FBD/LRR-repeat protein At4g26340 OS=Arabidopsis thaliana
GN=At4g26340 PE=2 SV=1
Length = 419
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 67 IWGCPVLEEIIIV--DQEKRNNNIVMFPQLQYLKMYDLKKLTSFCTRDVHIIKFPSLRKL 124
++GCP LEE+ + DQ+ + + P L+ L M D ++ D ++I PSL+ L
Sbjct: 172 LFGCPNLEELFVERHDQDLEMDVTFVVPSLRRLSMID----KNYGQCDRYVIDVPSLKYL 227
Query: 125 WIS 127
I+
Sbjct: 228 NIT 230
>sp|Q8BPZ8|F175A_MOUSE BRCA1-A complex subunit Abraxas OS=Mus musculus GN=Fam175a PE=2
SV=1
Length = 407
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 42 CRNLRCLFSSSILSNSIFVRLQ--HLEIWGCPVLEEIIIVDQEKRNNNIVMFPQLQYLKM 99
C+ LR F S + +S + L+ H+ GC V + +VDQ V P+ +
Sbjct: 280 CQALRTFFPESEVLHSCVISLKNRHISPSGCNVNHHVDVVDQLTLMVEYVYSPEASPVPT 339
Query: 100 YDLKKLTSFCTRDVHIIKFPSL 121
L+K + T D +K P L
Sbjct: 340 AQLRKRKALDTHDQGSVKRPRL 361
>sp|O64973|RPS5_ARATH Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5
PE=1 SV=2
Length = 889
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 27/145 (18%)
Query: 1 VALPKLENLE--------LRSINVERIW----QNQVSALSCGVQNLIHLTLYKCRNLRCL 48
+ LP + NL +R I +ER +N+ C NL + + KC L+ L
Sbjct: 703 LTLPTMGNLRKLGIKRCGMREIKIERTTSSSSRNKSPTTPC-FSNLSRVFIAKCHGLKDL 761
Query: 49 FSSSILSNSIFVRLQHLEIWGCPVLEEIIIVDQ-EKRNNNIVMFPQLQYLKMYDLKKLTS 107
N F LE+ +E+II ++ E+ + IV F +L+ L +++L+ L
Sbjct: 762 TWLLFAPNLTF-----LEVGFSKEVEDIISEEKAEEHSATIVPFRKLETLHLFELRGLKR 816
Query: 108 F--------CTRDVHIIKFPSLRKL 124
C + +H+ K LRKL
Sbjct: 817 IYAKALHFPCLKVIHVEKCEKLRKL 841
>sp|Q8D2W4|CCA_WIGBR CCA-adding enzyme OS=Wigglesworthia glossinidia brevipalpis GN=cca
PE=3 SV=1
Length = 403
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 28/84 (33%)
Query: 10 ELRSINVERIWQNQVSA-------------LSCG--------VQNLIHLTLYKCRN---- 44
EL I VERIW A L CG ++NL H+ + +N
Sbjct: 166 ELFFIPVERIWLETKKALLCRNPHVYFKVLLKCGALKKIFPEIENLFHIKSFYNKNINLG 225
Query: 45 ---LRCLFSSSILSNSIFVRLQHL 65
LR L+ SS++SN I +R L
Sbjct: 226 SLTLRALYESSLISNEIKIRFSML 249
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis
thaliana GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 83 KRNNNIVMFPQLQYLKMYDLKKLTSFCTRDVHIIKFPSLRKLWISRCP 130
+ N+ V F LQ LK Y + + + ++ FP L+KL I RCP
Sbjct: 831 ENNSRGVPFQSLQILKFYGMPRWDEWICPELEDGIFPCLQKLIIQRCP 878
>sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190 OS=Arabidopsis thaliana
GN=At4g27190 PE=2 SV=1
Length = 985
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 3 LPKLENLELRSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFV-R 61
LP LE L LR +++E + Q + L ++ L + + CR LR L N + +
Sbjct: 808 LPNLEELHLRRVDLETFSELQ-THLGLKLETLKIIEITMCRKLRTLLDKR---NFLTIPN 863
Query: 62 LQHLEIWGCPVLEEIIIVDQEKRNNNIVMFPQLQYLKMYDLKKLTSFC 109
L+ +EI C L+ + E + P L+ LK+ +L L S C
Sbjct: 864 LEEIEISYCDSLQNL----HEALLYHQPFVPNLRVLKLRNLPNLVSIC 907
>sp|Q9FG90|DRL33_ARATH Probable disease resistance protein At5g43740 OS=Arabidopsis
thaliana GN=At5g43740 PE=2 SV=1
Length = 862
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 62 LQHLEIWGCPVLEEIIIVDQEKRNNN-------IVMFPQLQYLKMYDLKKLTSFCTRDVH 114
L+ LE+ P +EEII ++EK N +V F L+ L + + LT C +
Sbjct: 770 LKKLEVCWSPQIEEII--NKEKGMNITKLHRDIVVPFGNLEDLALRQMADLTEICW---N 824
Query: 115 IIKFPSLRKLWISRCPEF 132
P+LRK +I+ CP+
Sbjct: 825 YRTLPNLRKSYINDCPKL 842
>sp|P97573|SHIP1_RAT Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus
norvegicus GN=Inpp5d PE=1 SV=1
Length = 1190
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 54 LSNSIFVRLQHLEIWGCPVLEEIIIVDQEKRNNNIVM---FPQLQYLKMYDLKKLTSFCT 110
LS ++F RLQ ++ G P EE + Q+ + +++ F + + LKKLTS
Sbjct: 162 LSETLFQRLQSMDTSGLP--EEHLKAIQDYLSTQLMLDSDFLKTGSSNLPHLKKLTSLLC 219
Query: 111 RDVH---IIKFPSLRKL 124
+++H I PSL L
Sbjct: 220 KELHGEVIRTLPSLESL 236
>sp|Q9FF58|FBD30_ARATH FBD-associated F-box protein At5g60610 OS=Arabidopsis thaliana
GN=At5g60610 PE=2 SV=1
Length = 388
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 70 CPVLEEIII-VDQEKRNNN--IVMFPQLQYLKMYDLKKLTSFCTRDVHIIKFPSLR 122
CPVLE+++I +D +N +V+ P LQ L + K+ + C+ + ++I PSL+
Sbjct: 171 CPVLEDLVIELDDANQNVKALVVIVPTLQCLSL----KIPASCSDERYLIVTPSLK 222
>sp|B4MUE1|AFF4_DROWI AF4/FMR2 family member 4 OS=Drosophila willistoni GN=lilli PE=3 SV=1
Length = 1837
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 RSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRC 47
+S N ++ N+V+ LS Q+LI L L+K R + C
Sbjct: 1671 QSANCQQETHNKVAILSLRCQSLISLKLFKLRRVNC 1706
>sp|Q8NFZ0|FBX18_HUMAN F-box only protein 18 OS=Homo sapiens GN=FBXO18 PE=1 SV=2
Length = 1043
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 25 SALSCGVQNLIHLTLYKCRNLRCLFSSSILSNSIFVRLQHLEIWGCPVLEEIIIVDQEKR 84
S L+ G I L C+ L F+S+ +I H+ IW + ++V+Q ++
Sbjct: 541 SVLAEGKGGFIRAKLV-CKTLENFFASADEELTI----DHVPIWCKNSQGQRVMVEQSEK 595
Query: 85 NNNIVMFPQLQYLKMYDLKKLTSFCTRDVHIIKFPSLRKLW 125
N + L+ +++D + CT + H + KLW
Sbjct: 596 LNGV-----LEASRLWDNMRKLGECTEEAHQMTHDGYLKLW 631
>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS=Solanum bulbocastanum
GN=RGA4 PE=2 SV=1
Length = 988
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 29 CGVQNLIHLTLYKCRNLRCLFSSSILSNSIFVRLQHLEIWGCPV 72
C +QNL L ++ C +L CL + S L+HL + GCP+
Sbjct: 570 CKLQNLQTLDVHNCYSLNCLPKQT----SKLSSLRHLVVDGCPL 609
>sp|Q29KG4|AFF4_DROPS AF4/FMR2 family member 4 OS=Drosophila pseudoobscura pseudoobscura
GN=lilli PE=3 SV=2
Length = 1770
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 12 RSINVERIWQNQVSALSCGVQNLIHLTLYKCRNLRC 47
+S N + N+V+ LS Q+LI L LYK R C
Sbjct: 1600 QSTNGQHETHNKVAILSLRCQSLISLKLYKLRRTNC 1635
>sp|Q8L3R3|RFL1_ARATH Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1
PE=3 SV=2
Length = 885
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 62 LQHLEIWGCPVLEEIIIVDQEKR--NNNIVMFPQLQYLKMYDLKKLTS 107
L +L +WGC LE+II ++ I+ F +L+ L +Y L +L S
Sbjct: 768 LINLRVWGCKHLEDIISKEKAASVLEKEILPFQKLECLNLYQLSELKS 815
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.140 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,934,903
Number of Sequences: 539616
Number of extensions: 1561112
Number of successful extensions: 4146
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 4125
Number of HSP's gapped (non-prelim): 62
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)