BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036008
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GWP3|COPT6_ARATH Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1
Length = 145
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
Query: 3 PPNNRGTMMHHHNT---MTHMTFFWGKNSEILFSGWPGTSPGMYVLALILVFVLAVLVER 59
PP++ +M++H N+ M HMTFFWGKN+EILFSGWPGTS GMYVL LI+VF+LAV+VE
Sbjct: 7 PPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEW 66
Query: 60 LSHCKLMK-PGANHATAGLIQTLLHAIRVGLAFFVMLAIMSFNA 102
L+H +++ G+ GL+QT ++ ++ GLA+ VMLA+MSFN
Sbjct: 67 LAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNG 110
>sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2
Length = 170
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 5/86 (5%)
Query: 21 TFFWGKNSEILFSGWPGTSPGMYVLALILVFVLAVLVERLSHCKLMK----PGANHATAG 76
TFFWGKN+E+LFSGWPGTS GMY L LI VF LAVL E L+H L++ AN A AG
Sbjct: 45 TFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRA-AG 103
Query: 77 LIQTLLHAIRVGLAFFVMLAIMSFNA 102
LIQT ++ +R+GLA+ VMLA+MSFNA
Sbjct: 104 LIQTAVYTLRIGLAYLVMLAVMSFNA 129
>sp|Q9FGU8|COPT3_ARATH Copper transporter 3 OS=Arabidopsis thaliana GN=COPT3 PE=2 SV=1
Length = 151
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%)
Query: 12 HHHNTMTHMTFFWGKNSEILFSGWPGTSPGMYVLALILVFVLAVLVERLSHCKLMKPGAN 71
H H M HMTFFWGK +E+LF GWPGTS MY + L ++FV++ E LS C MK G
Sbjct: 24 HRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPA 83
Query: 72 HATAGLIQTLLHAIRVGLAFFVMLAIMSFNA 102
GL+QT ++ +R L++ VMLA+MSFN
Sbjct: 84 SLGGGLLQTAVYTVRAALSYLVMLAVMSFNG 114
>sp|Q9STG2|COPT2_ARATH Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1
Length = 158
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Query: 22 FFWGKNSEILFSGWPGTSPGMYVLALILVFVLAVLVERLSHCKLMK-PGANHATAGLIQT 80
FFWGKN+E+LFSGWPGTS GMY L LI++F+LAV+ E L+H +++ G+ + AGL QT
Sbjct: 34 FFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQT 93
Query: 81 LLHAIRVGLAFFVMLAIMSFNA 102
++ ++ GL++ VMLA+MSFNA
Sbjct: 94 AVYTLKTGLSYLVMLAVMSFNA 115
>sp|Q94EE4|COPT1_ORYSJ Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2
SV=1
Length = 161
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 18 THMTFFWGKNSEILFSGWPGTSPGMYVLALILVFVLAVLVE-----RLSHCKLMKPGANH 72
THMTFFWGKNSE+LF+ WPGT GMY LALI VF LAV+VE R C
Sbjct: 33 THMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRRADACLAALARRAP 92
Query: 73 ATAGLIQTLLHAIRVGLAFFVMLAIMSFNAFIL 105
A GL + +H +RVG+A+ +MLA+MSFN +
Sbjct: 93 AAGGLARAAVHTVRVGVAYLLMLALMSFNGGVF 125
>sp|Q8SAA5|COPT4_ARATH Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2
Length = 145
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 13 HHNTMTHMTFFWGKNSEILFSGWPGTSPGMYVLALILVFVLAVLVERLSHC---KLMKPG 69
H ++ H TF+WG N ++LFSGWPG+ GMY LALI VF LA L E L+ C +K G
Sbjct: 25 HRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQG 84
Query: 70 ANHATAGLIQTLLHAIRVGLAFFVMLAIMSFN 101
A+ +T ++ ++ G ++ V+LA++SFN
Sbjct: 85 ADKLAKVAFRTAMYTVKSGFSYLVILAVVSFN 116
>sp|Q60EN8|COPT2_ORYSJ Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1
SV=1
Length = 151
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 19 HMTFFWGKNSEILFSGWPGTSPGMYVLALILVFVLAVLVERLSHCKL---MKPGANHATA 75
HMTFFWGKN+E+LF+ WPG GMY LA++ +F LAVL+E + L + A
Sbjct: 24 HMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEFRGYRVLEARLARRRAPRAA 83
Query: 76 GLIQTLLHAIRVGLAFFVMLAIMSFNA 102
++T +HA+RVG+A+ +MLA+MSFN
Sbjct: 84 AALRTAVHAVRVGVAYLIMLALMSFNG 110
>sp|Q7XTF8|COPT6_ORYSJ Copper transporter 6 OS=Oryza sativa subsp. japonica GN=COPT6 PE=2
SV=1
Length = 184
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 12 HHHNTMTHMTFFWGKNSEILFSGWPGT-SPGMYVLALILVFV-------LAVLVERLSH- 62
H M HMTFFW + +L GWPG GMY L L+ V L+VL RL+
Sbjct: 32 HKMAMMMHMTFFWSDRAVVLIRGWPGERGAGMYALCLLFVLALAALTEGLSVLSRRLARR 91
Query: 63 ------CKLMKPGANHATAGLIQTLLHAIRVGLAFFVMLAIMSFNAFIL 105
+P A++ + T +HA R+G+A+ VMLA+MSFN +L
Sbjct: 92 GGGAASSDGGRPAPAPASSAALLTAVHAARMGMAYLVMLAVMSFNVGVL 140
>sp|Q5ZD08|COPT3_ORYSJ Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3
PE=2 SV=1
Length = 150
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 19 HMTFFWGKNSEILFSGWPGTSPGMY 43
HMTF+WGKNSEILF+GWPG S GMY
Sbjct: 29 HMTFYWGKNSEILFTGWPGASGGMY 53
>sp|Q9JK41|COPT1_RAT High affinity copper uptake protein 1 OS=Rattus norvegicus
GN=Slc31a1 PE=2 SV=1
Length = 187
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 32/136 (23%)
Query: 1 MPPPNNRGTMMHH-HNTMTHMTFFWG-KNSEILFSGWPGTSPGMYVLALILVFVLAVLVE 58
MPP + T H H M MTF++G KN ++LFS +PG A + VF+LA+ E
Sbjct: 22 MPPHQHPTTSASHSHEMMMPMTFYFGFKNVDLLFSSLVINTPGEMAGAFVAVFLLAMFYE 81
Query: 59 --RLSHCKLMK-------------PGAN-------HATAG--------LIQTLLHAIRVG 88
+++ L++ PG N H T G L+QT+LH I+V
Sbjct: 82 GLKIAREGLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVV 141
Query: 89 LAFFVMLAIMSFNAFI 104
+++F+ML M++N ++
Sbjct: 142 ISYFLMLIFMTYNGYL 157
>sp|Q8WNR0|COPT1_PIG High affinity copper uptake protein 1 OS=Sus scrofa GN=SLC31A1 PE=2
SV=1
Length = 189
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 38/139 (27%)
Query: 1 MPP----PNNRGTMMHHHNTMTHMTFFWG-KNSEILFSGWPGTSPGMYVLALILVFVLAV 55
MPP P + G+ H + M MTF++G K E+LF+G + G A + VF+LA+
Sbjct: 24 MPPSHHHPTSSGS---HESMMMPMTFYFGFKKVEVLFAGLVINTAGEMAGAFVAVFLLAM 80
Query: 56 LVE--RLSHCKLMK-------------PGAN-------HATAG--------LIQTLLHAI 85
E +++ L++ PG N H T G L+QT+LH I
Sbjct: 81 FYEGLKIAREGLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHII 140
Query: 86 RVGLAFFVMLAIMSFNAFI 104
+V +++F+ML M++N ++
Sbjct: 141 QVVISYFLMLIFMTYNGYL 159
>sp|O15431|COPT1_HUMAN High affinity copper uptake protein 1 OS=Homo sapiens GN=SLC31A1
PE=1 SV=1
Length = 190
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 31/116 (26%)
Query: 20 MTFFWG-KNSEILFSGWPGTSPGMYVLALILVFVLAVLVE--RLSHCKLMK--------- 67
MTF++G KN E+LFSG + G A + VF+LA+ E +++ L++
Sbjct: 45 MTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYN 104
Query: 68 ----PGAN-------HATAG--------LIQTLLHAIRVGLAFFVMLAIMSFNAFI 104
PG N H T G L+QT+LH I+V +++F+ML M++N ++
Sbjct: 105 SMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYL 160
>sp|Q5RAS6|COPT1_PONAB High affinity copper uptake protein 1 OS=Pongo abelii GN=SLC31A1
PE=2 SV=1
Length = 190
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 31/116 (26%)
Query: 20 MTFFWG-KNSEILFSGWPGTSPGMYVLALILVFVLAVLVE--RLSHCKLMK--------- 67
MTF++G KN E+LFSG + G A + VF+LA+ E +++ L++
Sbjct: 45 MTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYN 104
Query: 68 ----PGAN-------HATAG--------LIQTLLHAIRVGLAFFVMLAIMSFNAFI 104
PG N H T G L+QT+LH I+V +++F+ML M++N ++
Sbjct: 105 SMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYL 160
>sp|Q8K211|COPT1_MOUSE High affinity copper uptake protein 1 OS=Mus musculus GN=Slc31a1
PE=2 SV=1
Length = 196
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 31/116 (26%)
Query: 20 MTFFWG-KNSEILFSGWPGTSPGMYVLALILVFVLAVLVE--RLSHCKLMK--------- 67
MTF++ KN +LFSG +PG A + VF+LA+ E +++ L++
Sbjct: 51 MTFYFDFKNVNLLFSGLVINTPGEMAGAFVAVFLLAMFYEGLKIAREGLLRKSQVSIRYN 110
Query: 68 ----PGAN-------HATAG--------LIQTLLHAIRVGLAFFVMLAIMSFNAFI 104
PG N H T G L+QT+LH I+V +++F+ML M++N ++
Sbjct: 111 SMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYL 166
>sp|Q93VM8|COPT5_ARATH Copper transporter 5 OS=Arabidopsis thaliana GN=COPT5 PE=2 SV=1
Length = 146
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 25/110 (22%)
Query: 17 MTHMTFFWGKNSEILFSGWPGTSPGMYVLALILVFVLAVLVERLSHCK------------ 64
M HMTF+WG + ILF W S Y+L LI FV + + L + +
Sbjct: 1 MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60
Query: 65 -------------LMKPGANHATAGLIQTLLHAIRVGLAFFVMLAIMSFN 101
L+ + A LL + + + +MLA MSFN
Sbjct: 61 PPPPRSSSGVSAPLIPKSGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFN 110
>sp|Q10KT6|COPT4_ORYSJ Copper transporter 4 OS=Oryza sativa subsp. japonica GN=COPT4 PE=2
SV=1
Length = 183
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 18 THMTFFWGKNSEILFSGWPGTSPG--MY------VLALILVFVLAVLVERLSHCKLMKPG 69
T M+F WG + +LF WPG G MY VLAL + R L
Sbjct: 32 TGMSFTWGHRAVVLFPRWPGDRAGVGMYFLCLLLVLALAALAEALSAASRRLDLDLDLSR 91
Query: 70 ANHATAGLIQTLL----HAIRVGLAFFVMLAIMSFNAFIL 105
+ Q LL HA R+GLA+ VMLA+MSFNA +L
Sbjct: 92 SRGRRRRRRQQLLAAGVHAARMGLAYLVMLAVMSFNAGVL 131
>sp|P38865|CTR2_YEAST Copper transport protein CTR2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CTR2 PE=1 SV=1
Length = 189
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Query: 19 HMTFFWG-KNSEILFSGWP-GTSPGMYVLALILVFVLAVLVERLSHC--------KLMKP 68
+M F W KN+ ++F W T PG+ +L+ + +F LA L E L +C +++ P
Sbjct: 60 NMLFSWSYKNTCVVFEWWHIKTLPGL-ILSCLAIFGLAYLYEYLKYCVHKRQLSQRVLLP 118
Query: 69 GAN----HATAGLIQTLLHAIRVGLAFFVMLAIMSFNAFIL 105
+ + + ++L+ ++VG +F +ML M++N +++
Sbjct: 119 NRSLTKINQADKVSNSILYGLQVGFSFMLMLVFMTYNGWLM 159
>sp|Q69P80|COP51_ORYSJ Copper transporter 5.1 OS=Oryza sativa subsp. japonica GN=COPT5.1
PE=2 SV=1
Length = 149
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 28/113 (24%)
Query: 17 MTHMTFFWGKNSEILFSGWPGTSPGMYVLALILVFVLAVLVERLS----HCKLM---KP- 68
M HMTF+WGK+ ILF GW + Y+L+L+ + + + + L KL+ KP
Sbjct: 1 MMHMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPA 60
Query: 69 --------------------GANHATAGLIQTLLHAIRVGLAFFVMLAIMSFN 101
A A L L + GL + +MLA+MSFN
Sbjct: 61 SIPPPASSDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFN 113
>sp|Q9CPU9|COPT2_MOUSE Probable low affinity copper uptake protein 2 OS=Mus musculus
GN=Slc31a2 PE=1 SV=1
Length = 143
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 79 QTLLHAIRVGLAFFVMLAIMSFNAFIL 105
Q+L+H I+V + +FVMLA+MS+N +I
Sbjct: 96 QSLVHVIQVVIGYFVMLAVMSYNTWIF 122
>sp|O15432|COPT2_HUMAN Probable low affinity copper uptake protein 2 OS=Homo sapiens
GN=SLC31A2 PE=1 SV=1
Length = 143
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 79 QTLLHAIRVGLAFFVMLAIMSFNAFIL 105
Q+L+H I+V + +F+MLA+MS+N +I
Sbjct: 96 QSLIHVIQVVIGYFIMLAVMSYNTWIF 122
>sp|Q6Z0Q9|COP52_ORYSJ Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica
GN=COPT5.2 PE=3 SV=1
Length = 176
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 5/26 (19%)
Query: 17 MTHMTFFWGKNSEILF-----SGWPG 37
M HM+F+WG + ILF SGWPG
Sbjct: 1 MMHMSFYWGTSVTILFDGWRTSGWPG 26
>sp|B9ITF9|OAT_BACCQ Ornithine aminotransferase OS=Bacillus cereus (strain Q1) GN=rocD
PE=3 SV=1
Length = 396
Score = 28.9 bits (63), Expect = 9.6, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 25 GKNSEILFSGWPGTSPGMYVLALIL---VFVLAVLVERLSHCKLMKPGANHATAG 76
G+ ++ W G +P MY+L L VF ++ + + +PG++ +T G
Sbjct: 233 GRTGKVFACDWDGVTPDMYILGKALGGGVFPISCVAANRDILGVFEPGSHGSTFG 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.140 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,772,049
Number of Sequences: 539616
Number of extensions: 1277406
Number of successful extensions: 3409
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3364
Number of HSP's gapped (non-prelim): 29
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)