Query 036011
Match_columns 977
No_of_seqs 907 out of 6475
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 14:23:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036011.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036011hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.3E-83 1.1E-87 791.9 44.1 607 2-619 6-755 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.4E-64 4.9E-69 625.4 35.8 520 49-580 99-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-59 7.3E-64 574.2 39.1 553 49-605 24-626 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 2.3E-58 7.9E-63 565.0 39.9 531 54-598 8-594 (680)
5 3t6q_A CD180 antigen; protein- 100.0 7E-59 2.4E-63 561.9 34.6 512 55-583 17-565 (606)
6 4eco_A Uncharacterized protein 100.0 2.1E-59 7.1E-64 565.8 26.4 490 5-554 27-600 (636)
7 3vq2_A TLR4, TOLL-like recepto 100.0 2.3E-57 7.9E-62 548.6 34.1 511 51-583 33-563 (606)
8 4ecn_A Leucine-rich repeat pro 100.0 2.6E-57 8.7E-62 555.0 32.2 498 4-578 265-864 (876)
9 3t6q_A CD180 antigen; protein- 100.0 8.1E-57 2.8E-61 543.8 34.8 516 33-558 5-564 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 5.3E-56 1.8E-60 554.5 35.4 520 38-583 14-565 (844)
11 3vq2_A TLR4, TOLL-like recepto 100.0 4.3E-55 1.5E-59 528.8 31.5 491 49-558 55-562 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 3E-54 1E-58 538.7 36.6 524 53-604 7-563 (844)
13 2z81_A CD282 antigen, TOLL-lik 100.0 5.5E-53 1.9E-57 504.1 32.3 498 37-583 3-515 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 1E-51 3.4E-56 495.7 35.3 507 55-584 12-537 (570)
15 3omv_A RAF proto-oncogene seri 100.0 1.4E-51 4.8E-56 444.2 21.0 260 683-962 36-300 (307)
16 2z63_A TOLL-like receptor 4, v 100.0 2.2E-50 7.5E-55 484.1 33.3 492 49-559 27-536 (570)
17 4aoj_A High affinity nerve gro 100.0 1E-51 3.4E-56 452.1 17.9 258 683-962 41-319 (329)
18 4asz_A BDNF/NT-3 growth factor 100.0 2.9E-52 9.8E-57 450.0 13.1 258 683-962 13-289 (299)
19 2z81_A CD282 antigen, TOLL-lik 100.0 6.1E-50 2.1E-54 477.7 30.1 491 29-558 4-514 (549)
20 4gt4_A Tyrosine-protein kinase 100.0 1.2E-51 4.1E-56 447.1 13.8 256 684-961 27-305 (308)
21 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-49 3.9E-54 471.9 25.9 462 53-582 3-485 (520)
22 4eco_A Uncharacterized protein 100.0 3.1E-50 1.1E-54 485.7 20.0 484 6-580 25-602 (636)
23 4fih_A Serine/threonine-protei 100.0 6.9E-50 2.4E-54 436.1 18.0 250 683-956 74-324 (346)
24 4g8a_A TOLL-like receptor 4; l 100.0 6.5E-48 2.2E-52 469.0 34.2 504 56-582 37-584 (635)
25 4b9d_A Serine/threonine-protei 100.0 1.9E-49 6.3E-54 433.4 17.6 251 682-956 23-277 (350)
26 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.6E-49 5.4E-54 426.6 16.1 249 683-955 32-284 (311)
27 4g3f_A NF-kappa-beta-inducing 100.0 2E-49 7E-54 431.2 15.8 252 683-960 58-314 (336)
28 3hmm_A TGF-beta receptor type- 100.0 1.9E-49 6.3E-54 431.6 15.5 268 683-962 3-297 (303)
29 3fpq_A Serine/threonine-protei 100.0 2.8E-48 9.6E-53 415.4 21.2 245 686-956 29-283 (290)
30 4fie_A Serine/threonine-protei 100.0 1.1E-48 3.7E-53 437.2 18.3 250 683-956 151-401 (423)
31 4ase_A Vascular endothelial gr 100.0 1.1E-48 3.8E-53 431.3 16.3 262 680-962 61-347 (353)
32 3hyh_A Carbon catabolite-derep 100.0 6.9E-48 2.4E-52 408.6 18.9 246 683-956 13-263 (275)
33 4ecn_A Leucine-rich repeat pro 100.0 2.1E-47 7.2E-52 467.4 25.9 442 74-582 323-844 (876)
34 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.4E-46 8.1E-51 447.1 27.2 468 53-583 34-515 (562)
35 3ubd_A Ribosomal protein S6 ki 100.0 6.7E-48 2.3E-52 414.3 11.3 242 683-950 24-271 (304)
36 2z7x_B TOLL-like receptor 1, v 100.0 9.4E-47 3.2E-51 446.8 21.1 462 77-603 3-483 (520)
37 4g31_A Eukaryotic translation 100.0 9.8E-47 3.4E-51 407.7 19.2 250 683-956 5-280 (299)
38 4g8a_A TOLL-like receptor 4; l 100.0 4.2E-45 1.4E-49 444.2 34.3 490 50-556 52-582 (635)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-43 4.2E-48 423.6 25.5 462 75-603 32-512 (562)
40 1ogq_A PGIP-2, polygalacturona 100.0 1E-43 3.6E-48 390.4 21.0 295 3-305 1-303 (313)
41 4f9c_A Cell division cycle 7-r 100.0 4.7E-44 1.6E-48 397.6 18.0 202 679-889 17-251 (361)
42 4b99_A Mitogen-activated prote 100.0 4.8E-44 1.6E-48 401.5 16.2 268 683-956 54-345 (398)
43 1jl5_A Outer protein YOPM; leu 100.0 4.8E-43 1.6E-47 404.3 20.9 403 72-583 9-416 (454)
44 3v47_A TOLL-like receptor 5B a 100.0 1.8E-42 6.3E-47 402.9 24.8 394 77-584 13-414 (455)
45 3v47_A TOLL-like receptor 5B a 100.0 2.2E-42 7.6E-47 402.2 25.4 384 55-507 15-409 (455)
46 3v5w_A G-protein coupled recep 100.0 1.3E-42 4.3E-47 404.8 21.0 248 682-955 188-449 (689)
47 3uto_A Twitchin; kinase, muscl 100.0 9.5E-43 3.2E-47 410.9 19.7 253 682-956 156-411 (573)
48 2qkw_B Protein kinase; three-h 100.0 2.4E-42 8.3E-47 382.0 19.2 280 675-962 31-315 (321)
49 3uim_A Brassinosteroid insensi 100.0 6.6E-42 2.2E-46 379.5 21.2 291 668-964 15-313 (326)
50 1jl5_A Outer protein YOPM; leu 100.0 1.5E-41 5.1E-46 391.9 23.9 406 50-583 11-434 (454)
51 3soc_A Activin receptor type-2 100.0 1.4E-41 4.8E-46 375.7 17.7 266 682-962 23-318 (322)
52 3s95_A LIMK-1, LIM domain kina 100.0 4.7E-41 1.6E-45 369.8 20.2 258 682-963 9-283 (310)
53 3fxz_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 363.5 22.4 251 682-956 19-270 (297)
54 3p86_A Serine/threonine-protei 100.0 3.5E-41 1.2E-45 369.8 18.0 268 681-972 35-308 (309)
55 2psq_A Fibroblast growth facto 100.0 4.5E-41 1.5E-45 378.4 18.1 259 682-962 80-364 (370)
56 2nru_A Interleukin-1 receptor- 100.0 6.7E-40 2.3E-44 360.1 26.7 282 669-962 11-306 (307)
57 3bz5_A Internalin-J, INLJ; leu 100.0 8.1E-40 2.8E-44 377.7 27.0 363 62-559 30-392 (457)
58 3cbl_A C-FES, proto-oncogene t 100.0 2.1E-41 7.1E-46 382.6 12.5 259 682-962 113-374 (377)
59 3kul_A Ephrin type-A receptor 100.0 8.3E-41 2.8E-45 369.7 16.6 260 682-963 48-314 (325)
60 3ugc_A Tyrosine-protein kinase 100.0 6.5E-41 2.2E-45 365.8 13.9 274 682-962 9-291 (295)
61 2c30_A Serine/threonine-protei 100.0 6E-40 2.1E-44 362.1 21.3 261 672-956 24-295 (321)
62 4hcu_A Tyrosine-protein kinase 100.0 8.5E-41 2.9E-45 359.7 13.2 259 682-964 9-268 (269)
63 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.8E-40 6E-45 357.0 15.6 257 682-962 7-264 (268)
64 3fe3_A MAP/microtubule affinit 100.0 4.9E-40 1.7E-44 363.0 19.1 249 681-956 13-265 (328)
65 3tki_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44 363.4 18.7 254 682-956 6-262 (323)
66 2qol_A Ephrin receptor; recept 100.0 2E-40 6.8E-45 373.3 15.4 259 682-962 44-309 (373)
67 3lb7_A RAF proto-oncogene seri 100.0 9.4E-40 3.2E-44 358.2 20.3 261 682-962 35-300 (307)
68 3q4u_A Activin receptor type-1 100.0 2.1E-39 7.3E-44 355.0 22.5 265 682-960 7-300 (301)
69 3zgw_A Maternal embryonic leuc 100.0 5.3E-40 1.8E-44 364.6 17.3 251 681-956 8-261 (347)
70 1tki_A Titin; serine kinase, m 100.0 1.1E-39 3.6E-44 359.8 19.5 252 682-956 4-258 (321)
71 3niz_A Rhodanese family protei 100.0 2E-39 6.8E-44 356.4 20.1 268 682-956 20-301 (311)
72 3poz_A Epidermal growth factor 100.0 3.4E-40 1.2E-44 365.5 14.1 257 683-962 15-278 (327)
73 3vhe_A Vascular endothelial gr 100.0 7.2E-40 2.4E-44 368.4 16.8 268 674-962 13-355 (359)
74 1o6v_A Internalin A; bacterial 100.0 4.7E-38 1.6E-42 366.1 32.5 346 72-531 44-389 (466)
75 1o6l_A RAC-beta serine/threoni 100.0 2.9E-39 9.9E-44 357.7 21.1 249 682-956 4-261 (337)
76 3tt0_A Basic fibroblast growth 100.0 8.1E-40 2.8E-44 370.4 16.9 260 682-963 68-353 (382)
77 4eqm_A Protein kinase; transfe 100.0 9.5E-40 3.2E-44 356.0 16.5 261 682-962 10-275 (294)
78 2yab_A Death-associated protei 100.0 2.7E-39 9.2E-44 361.3 20.5 253 681-956 10-273 (361)
79 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-38 4.2E-43 367.8 26.6 367 83-584 27-393 (457)
80 3l9p_A Anaplastic lymphoma kin 100.0 2.2E-40 7.6E-45 372.5 11.4 258 683-962 71-345 (367)
81 3gen_A Tyrosine-protein kinase 100.0 6.1E-40 2.1E-44 355.9 14.0 256 682-961 23-279 (283)
82 3og7_A AKAP9-BRAF fusion prote 100.0 2.2E-39 7.4E-44 352.5 18.3 260 682-961 23-287 (289)
83 1luf_A Muscle-specific tyrosin 100.0 6E-40 2E-44 366.6 14.2 260 681-962 45-335 (343)
84 2ivs_A Proto-oncogene tyrosine 100.0 1E-39 3.5E-44 359.8 15.4 258 682-961 22-310 (314)
85 4euu_A Serine/threonine-protei 100.0 7.6E-39 2.6E-43 353.6 21.7 279 682-966 8-313 (319)
86 4f0f_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 349.1 19.8 253 682-960 18-287 (287)
87 4aw2_A Serine/threonine-protei 100.0 1.2E-39 4.3E-44 372.0 15.4 263 675-956 66-339 (437)
88 2y0a_A Death-associated protei 100.0 5.3E-39 1.8E-43 355.4 19.7 251 683-956 11-272 (326)
89 3qup_A Tyrosine-protein kinase 100.0 1.4E-39 4.8E-44 360.3 15.0 263 681-965 21-301 (323)
90 3kex_A Receptor tyrosine-prote 100.0 6.5E-40 2.2E-44 363.0 12.3 257 683-962 13-276 (325)
91 2eva_A TAK1 kinase - TAB1 chim 100.0 1.1E-38 3.7E-43 350.0 21.7 253 683-962 8-263 (307)
92 3soa_A Calcium/calmodulin-depe 100.0 5.4E-39 1.9E-43 368.3 20.1 255 680-956 8-268 (444)
93 1kob_A Twitchin; kinase, intra 100.0 4.7E-39 1.6E-43 362.6 19.1 253 682-956 50-305 (387)
94 1rjb_A FL cytokine receptor; k 100.0 5.8E-39 2E-43 358.7 19.7 260 682-962 44-334 (344)
95 3o0g_A Cell division protein k 100.0 6.4E-39 2.2E-43 349.5 19.5 268 683-956 2-283 (292)
96 3c0i_A Peripheral plasma membr 100.0 4.3E-39 1.5E-43 359.9 18.4 252 683-956 24-287 (351)
97 1k9a_A Carboxyl-terminal SRC k 100.0 3.1E-39 1.1E-43 373.1 17.6 251 682-962 192-445 (450)
98 3op5_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 362.6 17.9 268 681-961 33-328 (364)
99 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.4E-39 8.1E-44 360.9 16.0 249 681-955 21-280 (353)
100 3mdy_A Bone morphogenetic prot 100.0 2.9E-38 1E-42 352.0 24.7 267 679-962 33-331 (337)
101 1csn_A Casein kinase-1; phosph 100.0 1.1E-38 3.6E-43 348.9 20.7 261 682-962 9-283 (298)
102 2bdw_A Hypothetical protein K1 100.0 6.4E-39 2.2E-43 359.5 19.2 252 682-956 28-285 (362)
103 2izr_A Casein kinase I isoform 100.0 5E-39 1.7E-43 356.8 18.0 260 682-962 8-281 (330)
104 1mp8_A Focal adhesion kinase 1 100.0 2E-39 6.8E-44 351.4 14.4 256 682-961 14-275 (281)
105 1t46_A HOMO sapiens V-KIT hard 100.0 6.8E-39 2.3E-43 353.1 18.9 260 682-962 22-307 (313)
106 1fot_A TPK1 delta, CAMP-depend 100.0 1.2E-38 4.2E-43 350.2 20.7 246 682-956 5-259 (318)
107 1o6v_A Internalin A; bacterial 100.0 1.6E-37 5.6E-42 361.5 31.3 344 97-554 45-388 (466)
108 2pvf_A Fibroblast growth facto 100.0 3E-39 1E-43 359.1 15.9 259 682-962 34-318 (334)
109 2zv2_A Calcium/calmodulin-depe 100.0 3.8E-39 1.3E-43 352.3 16.3 250 682-956 12-293 (298)
110 1ob3_A PFPK5, cell division co 100.0 4.5E-39 1.5E-43 349.9 16.7 267 683-956 2-281 (288)
111 3dbq_A Dual specificity protei 100.0 5.5E-39 1.9E-43 358.3 17.7 252 682-956 8-274 (343)
112 3t9t_A Tyrosine-protein kinase 100.0 1.6E-39 5.6E-44 349.3 12.9 257 682-962 7-264 (267)
113 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.5E-39 1.2E-43 356.7 15.7 247 682-956 8-259 (336)
114 1qcf_A Haematopoetic cell kina 100.0 1.2E-39 4.2E-44 377.3 12.5 256 682-962 187-444 (454)
115 3dtc_A Mitogen-activated prote 100.0 3.3E-39 1.1E-43 347.7 15.0 251 682-960 6-271 (271)
116 4dc2_A Protein kinase C IOTA t 100.0 5.6E-39 1.9E-43 361.8 17.5 249 682-950 51-307 (396)
117 4fvq_A Tyrosine-protein kinase 100.0 2.5E-39 8.4E-44 352.3 14.1 260 682-970 7-283 (289)
118 3qd2_B Eukaryotic translation 100.0 1.2E-38 4.3E-43 354.2 20.0 252 681-956 4-326 (332)
119 2x4f_A Myosin light chain kina 100.0 9.5E-39 3.2E-43 359.4 19.1 246 688-955 94-342 (373)
120 4fr4_A YANK1, serine/threonine 100.0 2.1E-38 7.3E-43 355.9 21.5 248 683-955 15-271 (384)
121 3gni_B Strad alpha; kinase fol 100.0 1.3E-38 4.3E-43 362.0 19.7 277 681-961 23-341 (389)
122 3lzb_A Epidermal growth factor 100.0 3.1E-39 1.1E-43 357.4 13.8 258 682-962 14-278 (327)
123 2w4o_A Calcium/calmodulin-depe 100.0 7.2E-39 2.5E-43 357.6 16.7 252 681-956 51-306 (349)
124 1opk_A P150, C-ABL, proto-onco 100.0 3E-39 1E-43 377.4 14.0 256 682-961 219-477 (495)
125 2yex_A Serine/threonine-protei 100.0 2.7E-38 9.2E-43 341.6 20.4 254 682-956 6-262 (276)
126 2zmd_A Dual specificity protei 100.0 1.6E-38 5.4E-43 360.1 19.4 251 683-956 56-321 (390)
127 3ork_A Serine/threonine protei 100.0 2.1E-39 7.2E-44 356.6 11.9 260 682-961 11-280 (311)
128 4e5w_A Tyrosine-protein kinase 100.0 5.6E-39 1.9E-43 351.9 15.2 269 683-961 21-301 (302)
129 3lxl_A Tyrosine-protein kinase 100.0 2.5E-39 8.5E-44 358.8 12.0 273 683-962 23-303 (327)
130 1mqb_A Ephrin type-A receptor 100.0 1.1E-38 3.9E-43 354.0 17.4 258 683-962 44-309 (333)
131 3v8s_A RHO-associated protein 100.0 3.5E-39 1.2E-43 365.6 13.4 259 676-956 62-330 (410)
132 3a8x_A Protein kinase C IOTA t 100.0 1.9E-38 6.5E-43 352.9 19.0 249 682-950 8-264 (345)
133 2xir_A Vascular endothelial gr 100.0 1.2E-38 4.1E-43 351.7 17.2 267 675-962 19-310 (316)
134 1xjd_A Protein kinase C, theta 100.0 6.5E-39 2.2E-43 355.9 15.1 250 679-954 13-268 (345)
135 2buj_A Serine/threonine-protei 100.0 1.6E-38 5.5E-43 350.8 18.1 261 682-962 28-306 (317)
136 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.8E-39 1.3E-43 372.7 13.6 256 682-962 183-440 (452)
137 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.1E-38 7.3E-43 353.0 19.0 246 682-956 40-294 (350)
138 3g2f_A Bone morphogenetic prot 100.0 7.7E-39 2.6E-43 356.5 15.2 274 682-962 12-318 (336)
139 3p1a_A MYT1 kinase, membrane-a 100.0 1.7E-38 5.9E-43 349.1 17.7 245 683-956 57-305 (311)
140 2vd5_A DMPK protein; serine/th 100.0 6.5E-39 2.2E-43 363.6 14.6 262 675-956 53-328 (412)
141 3kmu_A ILK, integrin-linked ki 100.0 1.1E-38 3.7E-43 343.6 15.7 251 682-961 9-269 (271)
142 2id5_A Lingo-1, leucine rich r 100.0 4.2E-38 1.5E-42 368.2 21.7 329 245-605 32-360 (477)
143 1b6c_B TGF-B superfamily recep 100.0 1.1E-37 3.8E-42 348.1 24.1 274 675-962 34-336 (342)
144 2w1i_A JAK2; chromosomal rearr 100.0 8.6E-39 2.9E-43 354.2 14.8 274 682-962 40-322 (326)
145 1u59_A Tyrosine-protein kinase 100.0 1.3E-38 4.3E-43 346.2 15.8 257 683-962 9-272 (287)
146 3uc3_A Serine/threonine-protei 100.0 1.3E-38 4.5E-43 357.0 16.1 253 682-956 19-275 (361)
147 2pmi_A Negative RE, cyclin-dep 100.0 2.2E-38 7.6E-43 349.2 17.7 268 682-956 4-294 (317)
148 1p4o_A Insulin-like growth fac 100.0 4.5E-39 1.5E-43 356.1 12.2 262 679-962 21-299 (322)
149 3gxj_A TGF-beta receptor type- 100.0 1E-39 3.5E-44 357.9 6.9 267 682-962 2-297 (303)
150 2wqm_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 347.0 18.9 264 682-966 31-301 (310)
151 2i0e_A Protein kinase C-beta I 100.0 2.4E-38 8.1E-43 352.5 17.8 250 681-956 18-277 (353)
152 3f3z_A Calcium/calmodulin-depe 100.0 3.3E-38 1.1E-42 341.0 18.5 251 682-956 8-262 (277)
153 3cc6_A Protein tyrosine kinase 100.0 1E-38 3.6E-43 345.7 14.5 257 682-962 11-273 (281)
154 3brb_A Proto-oncogene tyrosine 100.0 1.6E-38 5.6E-43 350.0 16.2 261 680-962 31-308 (313)
155 3c1x_A Hepatocyte growth facto 100.0 7E-39 2.4E-43 360.2 13.3 258 683-962 89-355 (373)
156 2r5t_A Serine/threonine-protei 100.0 1.8E-38 6.2E-43 356.0 16.4 255 682-962 37-296 (373)
157 2ac3_A MAP kinase-interacting 100.0 2.9E-38 9.9E-43 348.6 17.6 268 682-956 11-296 (316)
158 2i1m_A Macrophage colony-stimu 100.0 3.4E-38 1.2E-42 350.8 18.2 261 681-962 44-326 (333)
159 3kfa_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43 347.0 13.7 258 681-962 11-271 (288)
160 2y94_A 5'-AMP-activated protei 100.0 6.5E-38 2.2E-42 361.5 20.9 248 682-956 15-267 (476)
161 3hko_A Calcium/calmodulin-depe 100.0 3E-38 1E-42 353.1 17.5 261 677-956 20-331 (345)
162 3kk8_A Calcium/calmodulin depe 100.0 5.8E-38 2E-42 340.5 19.2 252 682-956 5-262 (284)
163 3a62_A Ribosomal protein S6 ki 100.0 3.4E-38 1.2E-42 349.1 17.7 249 682-956 16-277 (327)
164 3oz6_A Mitogen-activated prote 100.0 2.7E-38 9.3E-43 359.0 17.2 270 680-956 6-329 (388)
165 3f66_A Hepatocyte growth facto 100.0 2.6E-38 8.8E-43 345.9 16.3 259 682-962 24-291 (298)
166 1qpc_A LCK kinase; alpha beta 100.0 1.4E-38 4.9E-43 344.3 14.1 256 682-962 12-269 (279)
167 3cok_A Serine/threonine-protei 100.0 6.9E-38 2.3E-42 338.8 19.4 250 682-956 10-263 (278)
168 2v62_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 354.3 15.4 264 682-962 36-328 (345)
169 3kn6_A Ribosomal protein S6 ki 100.0 3.4E-38 1.2E-42 348.6 17.2 249 688-956 16-271 (325)
170 3lxp_A Non-receptor tyrosine-p 100.0 3.8E-38 1.3E-42 347.6 17.3 263 685-962 33-310 (318)
171 3dls_A PAS domain-containing s 100.0 5.3E-38 1.8E-42 348.4 18.3 243 681-956 22-275 (335)
172 2ozo_A Tyrosine-protein kinase 100.0 2.3E-38 7.9E-43 378.6 16.5 254 685-961 337-597 (613)
173 4agu_A Cyclin-dependent kinase 100.0 7.5E-38 2.6E-42 344.4 19.1 267 682-956 2-285 (311)
174 2a2a_A Death-associated protei 100.0 7.1E-38 2.4E-42 346.0 18.9 252 682-956 11-273 (321)
175 3fdn_A Serine/threonine-protei 100.0 8.6E-38 2.9E-42 338.2 18.9 248 681-956 7-258 (279)
176 2eue_A Carbon catabolite derep 100.0 7E-38 2.4E-42 338.1 18.1 247 682-956 12-263 (275)
177 3uzp_A CKI-delta, CKID, casein 100.0 1.9E-37 6.5E-42 338.6 21.6 262 682-963 8-281 (296)
178 2yfx_A Tyrosine-protein kinase 100.0 2.1E-38 7.1E-43 351.4 14.1 259 682-962 29-304 (327)
179 4eut_A Serine/threonine-protei 100.0 5.1E-38 1.8E-42 357.3 17.6 275 682-962 8-309 (396)
180 3pls_A Macrophage-stimulating 100.0 1.3E-37 4.4E-42 340.3 20.1 258 684-962 22-287 (298)
181 4hgt_A Casein kinase I isoform 100.0 1E-37 3.5E-42 340.8 19.2 263 680-962 6-280 (296)
182 3g33_A Cell division protein k 100.0 7.3E-38 2.5E-42 343.9 18.0 268 681-956 7-297 (308)
183 3is5_A Calcium-dependent prote 100.0 4.4E-38 1.5E-42 341.4 16.0 250 683-956 22-279 (285)
184 1u5q_A Serine/threonine protei 100.0 7.5E-38 2.6E-42 348.8 18.1 246 683-956 54-306 (348)
185 1xbb_A Tyrosine-protein kinase 100.0 4.1E-38 1.4E-42 342.9 15.5 257 682-962 15-279 (291)
186 1byg_A CSK, protein (C-termina 100.0 1.9E-38 6.6E-43 343.0 12.6 251 682-962 20-273 (278)
187 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.4E-38 2.5E-42 352.4 17.8 252 681-962 63-339 (365)
188 3i6u_A CDS1, serine/threonine- 100.0 9.1E-38 3.1E-42 357.4 18.6 254 680-956 132-400 (419)
189 2h34_A Serine/threonine-protei 100.0 7.9E-38 2.7E-42 343.6 17.4 259 682-962 33-296 (309)
190 3llt_A Serine/threonine kinase 100.0 1.5E-37 5E-42 349.6 20.0 207 672-888 24-262 (360)
191 3mtl_A Cell division protein k 100.0 1.7E-38 5.8E-43 351.3 12.0 267 683-956 2-282 (324)
192 1ua2_A CAK, cell division prot 100.0 8.2E-38 2.8E-42 349.2 17.2 272 678-956 5-292 (346)
193 3ttj_A Mitogen-activated prote 100.0 1.9E-37 6.7E-42 358.5 21.0 262 682-956 61-356 (464)
194 2acx_A G protein-coupled recep 100.0 1.6E-37 5.6E-42 362.4 20.4 251 682-956 183-445 (576)
195 2jii_A Serine/threonine-protei 100.0 2.2E-38 7.4E-43 354.9 12.3 263 682-962 41-336 (352)
196 4ejn_A RAC-alpha serine/threon 100.0 4.3E-38 1.5E-42 363.9 15.0 248 682-955 147-404 (446)
197 1nxk_A MAP kinase-activated pr 100.0 1.5E-37 5.1E-42 353.1 19.1 248 683-956 61-322 (400)
198 3rp9_A Mitogen-activated prote 100.0 1.1E-37 3.9E-42 362.0 18.4 195 682-881 52-280 (458)
199 1fvr_A Tyrosine-protein kinase 100.0 5.6E-38 1.9E-42 347.9 15.1 255 683-962 25-300 (327)
200 1t4h_A Serine/threonine-protei 100.0 3.7E-37 1.3E-41 335.2 21.3 248 683-956 26-283 (290)
201 1u46_A ACK-1, activated CDC42 100.0 3.7E-38 1.3E-42 343.4 13.2 259 682-962 17-284 (291)
202 2qr7_A Ribosomal protein S6 ki 100.0 9.6E-38 3.3E-42 346.8 16.5 253 681-956 20-278 (342)
203 3eqc_A Dual specificity mitoge 100.0 4E-38 1.4E-42 354.1 13.7 266 682-956 32-325 (360)
204 2h8h_A Proto-oncogene tyrosine 100.0 2.2E-38 7.7E-43 373.5 11.4 256 682-962 266-523 (535)
205 2a19_B Interferon-induced, dou 100.0 4.3E-38 1.5E-42 341.5 12.7 249 681-963 9-275 (284)
206 2jam_A Calcium/calmodulin-depe 100.0 1.7E-37 5.9E-42 340.2 17.6 251 682-956 8-262 (304)
207 3bhy_A Death-associated protei 100.0 1.8E-37 6.1E-42 336.5 17.5 257 683-962 5-274 (283)
208 2id5_A Lingo-1, leucine rich r 100.0 1.3E-36 4.3E-41 355.7 25.9 300 148-530 34-333 (477)
209 4aaa_A Cyclin-dependent kinase 100.0 8.6E-38 2.9E-42 347.0 15.2 268 682-956 24-307 (331)
210 3ll6_A Cyclin G-associated kin 100.0 1.5E-37 5.1E-42 346.2 16.7 256 682-963 27-309 (337)
211 2y7j_A Phosphorylase B kinase 100.0 4E-37 1.4E-41 345.7 20.3 256 678-956 89-360 (365)
212 2j7t_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42 343.6 13.3 254 681-956 17-276 (302)
213 2pml_X PFPK7, Ser/Thr protein 100.0 1E-37 3.5E-42 349.3 15.0 265 682-956 30-323 (348)
214 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.2E-38 2.5E-42 347.0 13.7 268 681-956 32-319 (329)
215 2rku_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 336.0 18.8 249 682-956 14-266 (294)
216 2vgo_A Serine/threonine-protei 100.0 4.3E-37 1.5E-41 333.6 19.1 247 682-956 13-263 (284)
217 2clq_A Mitogen-activated prote 100.0 5.3E-37 1.8E-41 334.9 19.8 251 684-956 23-279 (295)
218 3fme_A Dual specificity mitoge 100.0 2.4E-37 8.1E-42 336.8 17.0 250 682-955 6-266 (290)
219 4fl3_A Tyrosine-protein kinase 100.0 1.1E-37 3.8E-42 373.5 15.7 249 689-961 375-630 (635)
220 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.9E-37 1.3E-41 358.8 19.6 253 682-955 184-448 (543)
221 3n9x_A Phosphotransferase; mal 100.0 2.7E-37 9.1E-42 355.3 17.8 200 682-886 25-253 (432)
222 3mwu_A Calmodulin-domain prote 100.0 4E-37 1.4E-41 359.9 19.5 251 682-956 21-277 (486)
223 3sv0_A Casein kinase I-like; t 100.0 1E-36 3.4E-41 352.3 22.6 261 682-962 6-278 (483)
224 3a7i_A MST3 kinase, serine/thr 100.0 2.5E-37 8.5E-42 338.9 16.2 249 682-956 21-271 (303)
225 3com_A Serine/threonine-protei 100.0 7.5E-37 2.6E-41 336.9 20.1 252 681-956 27-279 (314)
226 2w5a_A Serine/threonine-protei 100.0 4.3E-38 1.5E-42 340.6 9.8 256 682-961 5-273 (279)
227 2owb_A Serine/threonine-protei 100.0 3.8E-37 1.3E-41 342.1 17.7 249 682-956 40-292 (335)
228 3nsz_A CK II alpha, casein kin 100.0 3.4E-37 1.2E-41 342.2 17.3 262 682-956 35-320 (330)
229 3byv_A Rhoptry kinase; malaria 100.0 2.4E-38 8.2E-43 357.8 8.0 240 682-955 72-359 (377)
230 3pg1_A Mitogen-activated prote 100.0 4E-37 1.4E-41 346.3 17.5 274 675-956 14-317 (362)
231 3lij_A Calcium/calmodulin depe 100.0 5E-37 1.7E-41 359.6 19.0 251 682-956 36-292 (494)
232 3q60_A ROP5B; pseudokinase, tr 100.0 1.2E-37 4E-42 351.6 12.9 254 682-955 61-352 (371)
233 1cm8_A Phosphorylated MAP kina 100.0 4.7E-37 1.6E-41 345.2 17.8 263 682-956 24-308 (367)
234 2h6d_A 5'-AMP-activated protei 100.0 7.8E-37 2.7E-41 330.1 18.5 248 682-956 10-262 (276)
235 3q5i_A Protein kinase; CDPK, m 100.0 1E-36 3.5E-41 357.9 20.9 252 681-956 34-302 (504)
236 2vwi_A Serine/threonine-protei 100.0 1.7E-37 5.8E-42 340.2 13.3 264 680-956 12-288 (303)
237 3mi9_A Cell division protein k 100.0 1.1E-36 3.7E-41 341.2 20.1 270 682-956 16-312 (351)
238 2ycf_A Serine/threonine-protei 100.0 4.9E-37 1.7E-41 339.6 16.9 252 681-955 8-274 (322)
239 3lm5_A Serine/threonine-protei 100.0 2.7E-37 9.3E-42 342.1 14.9 258 677-956 22-288 (327)
240 3cek_A Dual specificity protei 100.0 7.6E-37 2.6E-41 336.7 18.3 253 681-956 26-293 (313)
241 1x8b_A WEE1HU, WEE1-like prote 100.0 3.9E-37 1.3E-41 334.8 15.7 245 681-956 9-280 (289)
242 1vzo_A Ribosomal protein S6 ki 100.0 1.9E-37 6.5E-42 347.1 13.4 255 682-957 53-323 (355)
243 3nyv_A Calmodulin-domain prote 100.0 3E-37 1E-41 361.2 15.4 251 682-956 25-282 (484)
244 3an0_A Dual specificity mitoge 100.0 7.3E-37 2.5E-41 341.0 17.5 251 681-955 49-310 (340)
245 1phk_A Phosphorylase kinase; g 100.0 1.2E-36 4.2E-41 332.5 18.2 253 680-955 14-283 (298)
246 3eb0_A Putative uncharacterize 100.0 7.3E-37 2.5E-41 346.5 16.9 266 679-956 3-322 (383)
247 2r3i_A Cell division protein k 100.0 9.6E-37 3.3E-41 333.6 17.2 267 683-956 3-284 (299)
248 2xrw_A Mitogen-activated prote 100.0 2.2E-36 7.4E-41 340.9 20.5 261 682-956 24-319 (371)
249 3pfq_A PKC-B, PKC-beta, protei 100.0 1.5E-36 5E-41 366.3 20.3 249 681-955 339-597 (674)
250 2wtk_C Serine/threonine-protei 100.0 3.3E-36 1.1E-40 330.4 21.2 252 681-956 3-264 (305)
251 3kvw_A DYRK2, dual specificity 100.0 1.3E-36 4.4E-41 348.8 18.3 197 682-888 96-302 (429)
252 1zy4_A Serine/threonine-protei 100.0 9.5E-37 3.2E-41 334.2 16.2 254 681-956 4-284 (303)
253 1wak_A Serine/threonine-protei 100.0 9E-37 3.1E-41 348.2 16.2 265 682-956 36-392 (397)
254 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-37 5.4E-42 343.2 9.3 258 682-963 32-303 (319)
255 2x7f_A TRAF2 and NCK-interacti 100.0 6.5E-37 2.2E-41 339.4 14.1 256 677-956 18-287 (326)
256 2fst_X Mitogen-activated prote 100.0 7.6E-37 2.6E-41 343.0 14.3 263 682-956 28-312 (367)
257 2j0j_A Focal adhesion kinase 1 100.0 6.6E-37 2.3E-41 368.2 14.6 256 682-961 389-650 (656)
258 3qyz_A Mitogen-activated prote 100.0 2.1E-36 7.2E-41 340.3 17.7 269 681-956 25-314 (364)
259 3e3p_A Protein kinase, putativ 100.0 2.5E-36 8.5E-41 339.7 18.1 274 676-956 16-315 (360)
260 3o6n_A APL1; leucine-rich repe 100.0 8.9E-36 3E-40 338.8 22.7 348 29-458 4-352 (390)
261 2i6l_A Mitogen-activated prote 100.0 1.7E-36 5.8E-41 335.1 15.4 267 682-956 10-306 (320)
262 4e7w_A Glycogen synthase kinas 100.0 2.6E-36 8.9E-41 342.6 16.8 269 683-962 40-330 (394)
263 1z57_A Dual specificity protei 100.0 5E-36 1.7E-40 334.1 18.6 264 682-956 13-329 (339)
264 2wei_A Calmodulin-domain prote 100.0 4.7E-36 1.6E-40 325.9 17.6 252 681-956 20-277 (287)
265 3rgf_A Cyclin-dependent kinase 100.0 1.4E-36 4.7E-41 347.0 13.9 268 683-956 20-334 (405)
266 2vx3_A Dual specificity tyrosi 100.0 9.8E-36 3.4E-40 337.1 20.8 201 680-888 51-261 (382)
267 4exu_A Mitogen-activated prote 100.0 4.2E-36 1.4E-40 338.5 17.3 262 682-956 41-324 (371)
268 2b9h_A MAP kinase FUS3, mitoge 100.0 3.1E-36 1.1E-40 337.9 16.0 268 682-956 10-306 (353)
269 1blx_A Cyclin-dependent kinase 100.0 4E-36 1.4E-40 333.0 16.5 269 680-956 8-297 (326)
270 1j1b_A Glycogen synthase kinas 100.0 3.2E-36 1.1E-40 344.7 15.5 261 683-956 54-337 (420)
271 3oja_B Anopheles plasmodium-re 100.0 3.7E-35 1.3E-39 352.1 24.8 347 29-508 10-360 (597)
272 3o6n_A APL1; leucine-rich repe 100.0 2.6E-35 9E-40 334.9 21.2 317 237-604 61-377 (390)
273 2dyl_A Dual specificity mitoge 100.0 5.9E-36 2E-40 330.4 14.7 252 682-956 24-284 (318)
274 2rio_A Serine/threonine-protei 100.0 8.4E-36 2.9E-40 342.7 16.6 250 684-955 16-295 (434)
275 3coi_A Mitogen-activated prote 100.0 1.1E-35 3.8E-40 333.1 16.6 262 682-956 23-306 (353)
276 1ogq_A PGIP-2, polygalacturona 100.0 1.4E-35 4.7E-40 325.7 16.6 254 350-605 51-308 (313)
277 3aln_A Dual specificity mitoge 100.0 4.2E-36 1.4E-40 332.9 12.3 254 682-956 21-286 (327)
278 2eu9_A Dual specificity protei 100.0 2.3E-35 8E-40 331.0 18.4 264 682-956 18-334 (355)
279 3oja_B Anopheles plasmodium-re 100.0 2.8E-35 9.4E-40 353.2 20.1 319 236-605 66-384 (597)
280 3fhr_A MAP kinase-activated pr 100.0 1.1E-35 3.8E-40 330.3 15.1 252 682-956 27-288 (336)
281 2iwi_A Serine/threonine-protei 100.0 1E-35 3.5E-40 327.5 14.1 246 677-956 25-284 (312)
282 1q8y_A SR protein kinase; tran 100.0 7.9E-36 2.7E-40 337.3 13.5 265 682-956 18-334 (373)
283 3a99_A Proto-oncogene serine/t 100.0 1.1E-35 3.6E-40 328.3 13.7 243 680-956 40-294 (320)
284 3p23_A Serine/threonine-protei 100.0 1.1E-35 3.7E-40 340.6 13.3 250 682-955 23-283 (432)
285 3qa8_A MGC80376 protein; kinas 100.0 1.2E-35 4.2E-40 349.4 11.3 270 682-961 13-308 (676)
286 4fcg_A Uncharacterized protein 100.0 5.6E-35 1.9E-39 322.7 15.2 282 4-309 23-317 (328)
287 3uqc_A Probable conserved tran 100.0 2.2E-34 7.5E-39 311.6 17.0 230 683-962 31-265 (286)
288 4fmz_A Internalin; leucine ric 100.0 3.4E-33 1.2E-37 312.3 27.2 174 393-578 173-346 (347)
289 4fmz_A Internalin; leucine ric 100.0 2.6E-33 8.8E-38 313.3 25.4 308 213-554 39-346 (347)
290 2pzi_A Probable serine/threoni 100.0 3.3E-34 1.1E-38 348.6 16.0 239 682-960 79-326 (681)
291 3m2w_A MAP kinase-activated pr 100.0 1.7E-33 5.9E-38 307.5 18.3 231 682-956 16-257 (299)
292 2ft3_A Biglycan; proteoglycan, 100.0 1.6E-32 5.3E-37 304.7 23.5 288 246-576 34-331 (332)
293 3dzo_A Rhoptry kinase domain; 100.0 4.5E-34 1.5E-38 326.1 9.9 240 682-955 77-363 (413)
294 1xku_A Decorin; proteoglycan, 100.0 4.2E-32 1.4E-36 301.0 23.6 289 246-576 32-330 (330)
295 2vuw_A Serine/threonine-protei 100.0 5.2E-34 1.8E-38 317.2 6.8 243 682-954 19-329 (336)
296 2ft3_A Biglycan; proteoglycan, 100.0 1.4E-31 4.9E-36 296.9 24.0 290 75-456 34-331 (332)
297 1xku_A Decorin; proteoglycan, 100.0 2.5E-31 8.5E-36 294.8 25.6 247 52-342 33-281 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 3.2E-35 1.1E-39 342.5 -7.2 383 147-579 4-441 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-35 4.6E-40 345.6 -12.3 398 74-559 3-445 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 2.4E-31 8.2E-36 297.8 15.5 288 30-341 22-318 (353)
301 3ogk_B Coronatine-insensitive 100.0 2.9E-33 9.8E-38 336.9 -2.8 456 35-575 39-548 (592)
302 2z66_A Variable lymphocyte rec 100.0 2.4E-30 8.2E-35 283.6 12.0 255 35-308 4-263 (306)
303 2z66_A Variable lymphocyte rec 100.0 8E-30 2.7E-34 279.4 12.4 211 371-582 76-291 (306)
304 3g06_A SSPH2 (leucine-rich rep 100.0 6.6E-29 2.3E-33 294.5 17.1 290 29-421 13-308 (622)
305 3zyi_A Leucine-rich repeat-con 100.0 2.6E-28 8.8E-33 282.7 21.5 246 53-306 57-303 (452)
306 3ogk_B Coronatine-insensitive 100.0 5E-31 1.7E-35 317.3 -1.4 307 243-580 190-528 (592)
307 1wwl_A Monocyte differentiatio 100.0 1.3E-30 4.3E-35 286.3 1.9 250 72-338 41-310 (312)
308 2z80_A TOLL-like receptor 2, v 100.0 1.4E-28 4.7E-33 275.3 18.0 208 95-339 28-237 (353)
309 4fcg_A Uncharacterized protein 100.0 2.7E-28 9.4E-33 269.1 19.2 226 323-578 80-314 (328)
310 1ozn_A Reticulon 4 receptor; N 100.0 1.3E-28 4.5E-33 266.7 15.4 236 42-309 5-241 (285)
311 1ozn_A Reticulon 4 receptor; N 100.0 3.7E-28 1.3E-32 263.2 17.4 254 248-561 14-268 (285)
312 1wwl_A Monocyte differentiatio 100.0 1.9E-29 6.3E-34 277.0 6.6 224 351-580 65-311 (312)
313 3zyj_A Leucine-rich repeat-con 100.0 1.7E-27 5.8E-32 274.8 23.0 253 43-306 39-292 (440)
314 3zyi_A Leucine-rich repeat-con 100.0 9.1E-28 3.1E-32 278.1 20.4 232 349-582 75-307 (452)
315 3zyj_A Leucine-rich repeat-con 100.0 9.8E-28 3.4E-32 276.8 20.2 231 350-582 65-296 (440)
316 3o53_A Protein LRIM1, AGAP0063 99.9 5.2E-29 1.8E-33 274.0 3.8 180 397-583 99-281 (317)
317 3o53_A Protein LRIM1, AGAP0063 99.9 1E-28 3.4E-33 271.8 5.4 268 246-559 11-281 (317)
318 3g06_A SSPH2 (leucine-rich rep 99.9 1.8E-26 6.2E-31 273.7 23.8 269 218-565 40-308 (622)
319 2o6q_A Variable lymphocyte rec 99.9 1.2E-26 4.1E-31 248.9 20.2 217 35-282 2-218 (270)
320 4azs_A Methyltransferase WBDD; 99.9 7.9E-28 2.7E-32 283.7 11.1 184 691-884 242-437 (569)
321 2p1m_B Transport inhibitor res 99.9 3.2E-30 1.1E-34 310.4 -14.1 463 36-577 33-543 (594)
322 2p1m_B Transport inhibitor res 99.9 4.1E-29 1.4E-33 300.8 -5.6 209 369-579 285-520 (594)
323 2z62_A TOLL-like receptor 4, v 99.9 7E-26 2.4E-30 244.0 17.4 217 364-583 21-242 (276)
324 3oja_A Leucine-rich immune mol 99.9 1.1E-26 3.6E-31 270.5 11.5 192 370-573 77-270 (487)
325 3oja_A Leucine-rich immune mol 99.9 8.7E-27 3E-31 271.2 8.3 171 373-550 99-271 (487)
326 2z62_A TOLL-like receptor 4, v 99.9 5.9E-25 2E-29 236.8 18.6 227 55-309 12-240 (276)
327 2o6q_A Variable lymphocyte rec 99.9 9E-25 3.1E-29 234.3 19.6 206 374-582 17-222 (270)
328 1p9a_G Platelet glycoprotein I 99.9 1.1E-24 3.9E-29 235.6 17.6 206 369-581 6-211 (290)
329 3rfs_A Internalin B, repeat mo 99.9 7.2E-25 2.5E-29 235.3 14.9 220 351-583 21-240 (272)
330 3rfs_A Internalin B, repeat mo 99.9 6.9E-25 2.4E-29 235.4 14.0 189 369-566 59-247 (272)
331 3m19_A Variable lymphocyte rec 99.9 3.1E-24 1E-28 227.5 17.1 190 35-230 2-191 (251)
332 3en9_A Glycoprotease, O-sialog 99.9 4.6E-25 1.6E-29 258.7 8.0 186 686-886 339-539 (540)
333 1p9a_G Platelet glycoprotein I 99.9 1.8E-23 6.1E-28 226.1 18.4 206 319-556 5-210 (290)
334 2xwt_C Thyrotropin receptor; s 99.9 9.6E-24 3.3E-28 222.0 14.5 203 65-303 25-236 (239)
335 2ca6_A RAN GTPase-activating p 99.9 2E-25 6.9E-30 252.9 0.9 205 369-573 90-338 (386)
336 4glp_A Monocyte differentiatio 99.9 6.4E-24 2.2E-28 232.7 10.7 203 371-579 89-308 (310)
337 3goz_A Leucine-rich repeat-con 99.9 2.3E-25 7.9E-30 249.8 -1.6 264 55-341 3-301 (362)
338 2ast_B S-phase kinase-associat 99.9 3.9E-25 1.3E-29 245.7 -0.2 269 34-346 33-315 (336)
339 3m19_A Variable lymphocyte rec 99.9 7E-23 2.4E-27 217.0 17.0 180 373-555 14-193 (251)
340 3goz_A Leucine-rich repeat-con 99.9 1.6E-24 5.5E-29 243.0 4.5 258 274-555 3-298 (362)
341 2xwt_C Thyrotropin receptor; s 99.9 3.5E-23 1.2E-27 217.6 14.2 203 90-335 26-237 (239)
342 2ca6_A RAN GTPase-activating p 99.9 4.2E-25 1.5E-29 250.2 -1.1 214 369-582 56-320 (386)
343 4glp_A Monocyte differentiatio 99.9 2.3E-23 7.9E-28 228.2 9.9 225 75-307 65-308 (310)
344 1h6u_A Internalin H; cell adhe 99.9 1.2E-22 4.2E-27 221.8 15.6 173 369-555 59-231 (308)
345 1h6u_A Internalin H; cell adhe 99.9 1.8E-22 6.2E-27 220.5 16.0 196 369-580 37-232 (308)
346 3cvr_A Invasion plasmid antige 99.9 5.6E-23 1.9E-27 240.6 12.3 215 30-294 35-255 (571)
347 2ast_B S-phase kinase-associat 99.9 3.6E-23 1.2E-27 229.8 6.5 250 326-583 49-311 (336)
348 4ay9_X Follicle-stimulating ho 99.9 3.3E-22 1.1E-26 222.9 14.1 237 56-334 15-256 (350)
349 4ay9_X Follicle-stimulating ho 99.9 8.6E-22 2.9E-26 219.5 17.4 240 77-359 12-256 (350)
350 2o6s_A Variable lymphocyte rec 99.9 6.9E-22 2.4E-26 202.9 13.7 157 35-206 4-160 (208)
351 1zar_A RIO2 kinase; serine kin 99.9 3.6E-22 1.2E-26 214.4 8.3 151 677-858 84-252 (282)
352 2o6s_A Variable lymphocyte rec 99.8 5.8E-21 2E-25 196.0 13.9 155 422-583 29-183 (208)
353 3cvr_A Invasion plasmid antige 99.8 6.5E-21 2.2E-25 223.1 13.0 182 374-583 60-248 (571)
354 4b8c_D Glucose-repressible alc 99.8 7.6E-22 2.6E-26 240.0 4.1 233 6-255 130-369 (727)
355 3e6j_A Variable lymphocyte rec 99.8 4.2E-20 1.4E-24 192.3 16.3 164 31-210 12-175 (229)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 6.5E-21 2.2E-25 197.1 8.5 155 425-582 15-170 (220)
357 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.7E-24 196.6 15.2 173 369-555 42-214 (291)
358 2xot_A Amphoterin-induced prot 99.8 3.8E-20 1.3E-24 207.0 11.6 176 376-554 21-202 (361)
359 1m9s_A Internalin B; cell inva 99.8 1.2E-19 4E-24 215.1 15.7 202 352-569 24-225 (605)
360 2v9t_B SLIT homolog 2 protein 99.8 7.7E-20 2.6E-24 189.0 12.1 135 446-580 33-167 (220)
361 1h6t_A Internalin B; cell adhe 99.8 1.7E-19 5.8E-24 195.1 14.2 191 374-580 25-215 (291)
362 2v9t_B SLIT homolog 2 protein 99.8 3.8E-19 1.3E-23 183.8 15.5 151 54-207 15-165 (220)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 3.4E-19 1.2E-23 184.1 14.9 153 54-209 15-168 (220)
364 3e6j_A Variable lymphocyte rec 99.8 2.7E-19 9.1E-24 186.3 14.0 153 399-555 21-173 (229)
365 1dce_A Protein (RAB geranylger 99.8 1.1E-21 3.9E-26 231.1 -6.4 207 95-331 346-567 (567)
366 2xot_A Amphoterin-induced prot 99.8 5.1E-19 1.8E-23 197.8 15.4 175 54-231 22-202 (361)
367 1m9s_A Internalin B; cell inva 99.8 4.2E-19 1.4E-23 210.4 15.3 160 370-541 62-221 (605)
368 1dce_A Protein (RAB geranylger 99.8 3.8E-21 1.3E-25 226.5 -6.5 187 364-572 363-567 (567)
369 1xeu_A Internalin C; cellular 99.8 4.3E-19 1.5E-23 188.7 9.0 171 371-556 17-187 (263)
370 4b8c_D Glucose-repressible alc 99.8 4.1E-19 1.4E-23 216.0 9.4 191 380-581 208-407 (727)
371 1xeu_A Internalin C; cellular 99.8 9.8E-19 3.4E-23 186.0 10.4 170 72-259 17-186 (263)
372 4ezg_A Putative uncharacterize 99.8 2.3E-18 8E-23 174.7 11.2 154 393-578 40-194 (197)
373 4ezg_A Putative uncharacterize 99.7 2.7E-18 9.1E-23 174.3 11.6 155 368-530 39-194 (197)
374 1w8a_A SLIT protein; signaling 99.7 1.2E-18 4E-23 175.9 7.3 131 424-557 11-142 (192)
375 3sb4_A Hypothetical leucine ri 99.7 2.9E-18 9.8E-23 189.3 8.9 102 420-523 225-327 (329)
376 1zth_A RIO1 serine protein kin 99.7 2.2E-18 7.7E-23 182.6 6.2 137 685-833 49-219 (258)
377 1w8a_A SLIT protein; signaling 99.7 1.4E-17 4.9E-22 168.0 11.8 132 448-582 11-143 (192)
378 3sb4_A Hypothetical leucine ri 99.7 2.1E-17 7.3E-22 182.3 7.6 102 444-547 225-327 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 6.5E-17 2.2E-21 163.1 8.1 111 470-581 32-142 (193)
380 2ell_A Acidic leucine-rich nuc 99.7 2.2E-16 7.6E-21 155.6 11.3 133 445-579 24-161 (168)
381 2ell_A Acidic leucine-rich nuc 99.7 1.6E-16 5.6E-21 156.6 9.8 135 422-559 25-164 (168)
382 2je0_A Acidic leucine-rich nuc 99.6 2.4E-16 8.2E-21 151.9 9.6 128 445-574 17-149 (149)
383 2o6r_A Variable lymphocyte rec 99.6 1E-15 3.5E-20 152.3 12.9 133 36-183 5-137 (177)
384 2o6r_A Variable lymphocyte rec 99.6 6.1E-16 2.1E-20 153.9 11.3 129 424-555 10-138 (177)
385 2je0_A Acidic leucine-rich nuc 99.6 5E-16 1.7E-20 149.7 9.4 128 421-550 17-149 (149)
386 2wfh_A SLIT homolog 2 protein 99.6 1.9E-15 6.6E-20 152.2 13.2 108 99-207 32-139 (193)
387 4gyi_A RIO2 kinase; protein ki 99.6 1.8E-16 6.1E-21 173.7 4.1 140 683-834 95-266 (397)
388 1ds9_A Outer arm dynein; leuci 99.6 3E-17 1E-21 166.6 -3.1 135 438-579 41-186 (198)
389 4fdw_A Leucine rich hypothetic 99.6 1E-14 3.5E-19 164.2 15.8 88 486-576 293-381 (401)
390 4fdw_A Leucine rich hypothetic 99.6 2.4E-14 8.2E-19 161.1 17.3 249 73-344 112-365 (401)
391 4fs7_A Uncharacterized protein 99.6 4E-14 1.4E-18 160.1 19.1 67 134-202 59-125 (394)
392 4fs7_A Uncharacterized protein 99.6 4.8E-14 1.6E-18 159.5 18.9 330 115-546 64-393 (394)
393 1a9n_A U2A', U2A'; complex (nu 99.6 3.8E-15 1.3E-19 148.0 7.5 131 442-578 16-153 (176)
394 1ds9_A Outer arm dynein; leuci 99.5 1.3E-16 4.4E-21 162.0 -3.4 155 394-555 15-186 (198)
395 1a9n_A U2A', U2A'; complex (nu 99.5 5.4E-15 1.8E-19 146.8 8.3 133 417-554 15-153 (176)
396 3g39_A Variable lymphocyte rec 99.5 4.9E-14 1.7E-18 138.8 9.5 106 447-555 11-116 (170)
397 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.2E-18 136.4 9.6 104 448-554 15-118 (174)
398 3g39_A Variable lymphocyte rec 99.4 2.3E-13 7.8E-18 134.0 10.6 109 471-582 11-119 (170)
399 2r9u_A Variable lymphocyte rec 99.4 2.9E-13 9.9E-18 133.7 10.1 108 472-582 15-122 (174)
400 4gt6_A Cell surface protein; l 99.4 1.4E-11 4.7E-16 139.2 19.9 308 187-553 80-390 (394)
401 3un9_A NLR family member X1; l 99.3 2.7E-14 9.1E-19 159.2 -5.3 87 469-555 155-253 (372)
402 4gt6_A Cell surface protein; l 99.3 2.5E-11 8.6E-16 137.1 18.7 335 186-577 55-390 (394)
403 3un9_A NLR family member X1; l 99.3 6.7E-14 2.3E-18 156.0 -3.1 168 372-539 71-261 (372)
404 2ifg_A High affinity nerve gro 99.3 5.2E-12 1.8E-16 140.2 10.0 107 38-159 8-116 (347)
405 2ifg_A High affinity nerve gro 99.3 5.6E-12 1.9E-16 139.9 8.9 103 450-555 13-117 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 1.9E-11 6.4E-16 129.9 11.2 146 679-831 10-212 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.1 2E-10 6.8E-15 121.8 9.3 138 683-832 20-214 (264)
408 4h09_A Hypothetical leucine ri 99.1 3.9E-09 1.3E-13 118.5 19.9 302 165-526 41-342 (379)
409 4h09_A Hypothetical leucine ri 99.0 5E-09 1.7E-13 117.6 20.0 316 141-517 41-356 (379)
410 2ra8_A Uncharacterized protein 98.9 5.2E-10 1.8E-14 123.3 6.2 184 368-576 134-341 (362)
411 2ra8_A Uncharacterized protein 98.9 3.4E-10 1.2E-14 124.8 4.7 190 373-580 107-322 (362)
412 3dxp_A Putative acyl-COA dehyd 98.9 4.4E-09 1.5E-13 117.0 10.1 143 687-833 42-249 (359)
413 3rw6_A Nuclear RNA export fact 98.8 3E-11 1E-15 126.1 -8.3 145 36-185 76-235 (267)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 3.5E-09 1.2E-13 114.9 5.2 187 688-885 25-287 (304)
415 3rw6_A Nuclear RNA export fact 98.5 1.8E-08 6.2E-13 105.0 0.5 79 491-571 168-257 (267)
416 3r70_A Aminoglycoside phosphot 98.5 7.5E-07 2.6E-11 97.0 12.4 138 684-834 38-239 (320)
417 1io0_A Tropomodulin; LRR prote 98.4 3.2E-08 1.1E-12 98.3 0.6 43 416-458 31-78 (185)
418 1io0_A Tropomodulin; LRR prote 98.4 3.8E-08 1.3E-12 97.8 0.9 70 437-506 28-106 (185)
419 3d1u_A Putative fructosamine-3 98.3 2.3E-06 7.7E-11 91.3 12.3 76 687-766 19-97 (288)
420 3tdw_A Gentamicin resistance p 98.3 3.7E-06 1.3E-10 90.8 13.2 136 688-832 24-224 (306)
421 4gkh_A Aminoglycoside 3'-phosp 98.3 4.7E-06 1.6E-10 88.3 12.8 135 690-832 31-223 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 4.8E-06 1.6E-10 92.0 11.0 141 687-833 45-244 (362)
423 3ats_A Putative uncharacterize 98.1 3.1E-06 1.1E-10 93.7 7.9 80 688-767 25-121 (357)
424 2q83_A YTAA protein; 2635576, 97.8 6.9E-05 2.4E-09 82.2 12.1 138 689-831 38-251 (346)
425 2olc_A MTR kinase, methylthior 97.8 4.4E-05 1.5E-09 85.7 10.4 75 688-764 35-120 (397)
426 3e4g_A ATP synthase subunit S, 97.8 5.7E-06 1.9E-10 79.8 1.7 35 171-205 115-150 (176)
427 3jr1_A Putative fructosamine-3 97.7 0.00016 5.3E-09 77.6 11.5 136 688-828 41-232 (312)
428 3e4g_A ATP synthase subunit S, 97.6 5.1E-05 1.7E-09 73.1 4.6 85 372-456 60-150 (176)
429 3f7w_A Putative fructosamine-3 97.5 0.00025 8.4E-09 75.7 10.0 78 685-766 17-97 (288)
430 2pyw_A Uncharacterized protein 97.4 0.00035 1.2E-08 78.9 10.5 79 801-881 231-312 (420)
431 2ppq_A HSK, HK, homoserine kin 97.2 0.00099 3.4E-08 72.2 10.6 156 673-831 7-216 (322)
432 1pgv_A TMD-1, tropomodulin TMD 97.2 8.8E-05 3E-09 72.9 1.9 40 419-458 39-83 (197)
433 3csv_A Aminoglycoside phosphot 97.2 0.0019 6.6E-08 70.2 12.6 140 689-833 24-218 (333)
434 3dxq_A Choline/ethanolamine ki 97.2 0.0011 3.8E-08 71.0 10.2 128 688-833 23-203 (301)
435 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00016 5.4E-09 71.1 2.6 68 392-459 36-112 (197)
436 3feg_A Choline/ethanolamine ki 97.1 0.00091 3.1E-08 73.7 8.5 140 688-832 55-254 (379)
437 1zyl_A Hypothetical protein YI 97.0 0.0039 1.3E-07 67.6 12.0 140 689-832 32-223 (328)
438 1nw1_A Choline kinase (49.2 KD 96.9 0.0013 4.4E-08 74.2 8.3 73 688-766 78-159 (429)
439 3rfe_A Platelet glycoprotein I 96.8 0.0012 4E-08 60.6 5.5 57 521-579 12-69 (130)
440 2qg7_A Ethanolamine kinase PV0 96.7 0.0041 1.4E-07 70.3 9.8 74 688-766 113-188 (458)
441 2yle_A Protein spire homolog 1 96.7 0.0051 1.7E-07 60.5 9.0 102 765-884 34-135 (229)
442 3c5i_A Choline kinase; choline 96.6 0.0025 8.7E-08 70.4 7.4 73 689-766 39-121 (369)
443 3i1a_A Spectinomycin phosphotr 96.6 0.011 3.7E-07 64.3 12.2 68 692-766 32-108 (339)
444 3f2s_A CK, chetk-alpha, cholin 96.2 0.012 4.1E-07 64.9 9.4 139 689-831 58-279 (401)
445 3rfe_A Platelet glycoprotein I 96.2 0.008 2.7E-07 55.0 6.6 56 54-111 12-68 (130)
446 3mes_A Choline kinase; malaria 95.7 0.012 4E-07 65.8 6.7 74 688-766 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.7 0.11 3.6E-06 57.9 5.7 30 803-832 245-280 (401)
448 4ano_A ESSB; membrane protein, 73.6 8.4 0.00029 37.9 7.8 116 737-887 48-164 (219)
449 4ann_A ESSB; membrane protein, 70.6 6.9 0.00023 38.4 6.4 118 737-888 43-160 (215)
450 3cxl_A N-chimerin; SH2, RHO-GA 70.5 0.52 1.8E-05 53.2 -1.9 61 686-749 145-214 (463)
451 2lz0_A Uncharacterized protein 33.1 44 0.0015 28.2 4.3 38 462-500 13-50 (100)
452 2lz0_A Uncharacterized protein 30.3 89 0.003 26.2 5.8 12 392-403 15-26 (100)
453 3ls8_A Phosphatidylinositol 3- 28.4 7.1E+02 0.024 28.4 14.5 46 779-831 454-501 (614)
454 1cja_A Protein (actin-fragmin 22.7 1.5E+02 0.0052 31.0 7.0 137 687-832 73-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.3e-83 Score=791.88 Aligned_cols=607 Identities=31% Similarity=0.496 Sum_probs=451.4
Q ss_pred cccChHHHHHHHHHHHHhccCCCCCccCCCCCCCCCCcccceEecCCCCcEEEEEcCCCCCCcc---CCcc---------
Q 036011 2 IVQNLTTDQFALLAFKAHVTDPQSVLANNWSISQPICKWVGISCGARHQRVRALNLSNMGLRGT---IPPH--------- 69 (977)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~---~~~~--------- 69 (977)
.+++.++|++||++||+++.||. .+ ++|+.++|||+|.||+|+ +++|+.|+|+++++.|. +|++
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~-~l-~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKN-LL-PDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTT-SS-TTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred cccCCHHHHHHHHHHHhhCCCcc-cc-cCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 45778999999999999999887 55 699888999999999998 68999999999999987 6654
Q ss_pred --------------ccCcccccEeeccCCcccccCCC--CcCCCCCCCEEeCcCccCCCCCCccc-cccccCcEEeccCc
Q 036011 70 --------------LGNFSFLMSLDISKNNFHAYLPN--ELGQLRRLRFISLDYNEFSGSFPSWI-GVLSKLQILSLRNN 132 (977)
Q Consensus 70 --------------l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n 132 (977)
++.+++|++|||++|.+++.+|. .++++++|++|+|++|.+++.+|..+ +.+++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 44555555555555555555555 55555555555555555555555443 45555555555555
Q ss_pred CCCCCCCCc---ccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCC
Q 036011 133 SFTGPIPNS---LFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGP 209 (977)
Q Consensus 133 ~l~~~~p~~---l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~ 209 (977)
.+++..|.. +.++++|++|++++|.+.+.+|. +.+++|++|+|++|++++.+|. ++++++|++|++++|++++.
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSC
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCc
Confidence 555444433 44444455555555544443332 5666677777777777766665 77777777777777777777
Q ss_pred CchhhccccceeEEEccCCcccccc--------------------cCCCccccCCCCceEEEecCceeeecCCccccccc
Q 036011 210 IQPSIFNISTITLINLFGNQLSGHL--------------------DLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNAS 269 (977)
Q Consensus 210 ~~~~l~~l~~L~~L~L~~N~l~~~~--------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 269 (977)
++..+..+++|+.|+|++|++.+.. .+|..++..+++|++|+|++|++++.+|..+..++
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~ 318 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCT
T ss_pred ccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCC
Confidence 7777777777777777777665421 23333333346666777777776666666667777
Q ss_pred ccceEeecccccccccccc-cccccccccccccccccCCCCCCchhhhh------------------ccccc--CCCCce
Q 036011 270 KLTGLDLSFNSFSGLIPHT-FGNLRFLSVLNLANNYLTTDSPTAEWSFL------------------SSLTN--CRNLTT 328 (977)
Q Consensus 270 ~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~~------------------~~l~~--l~~L~~ 328 (977)
+|++|+|++|++++.+|.. |..+++|++|++++|.+++..|....... ..+.. +++|++
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 7777777777776555544 66677777777777776644333221111 01111 455666
Q ss_pred EEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeeccc
Q 036011 329 LAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNN 408 (977)
Q Consensus 329 L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 408 (977)
|++++|.+.+.+|..+..+. +|+.|++.+|++++.+|..++.+++|++|++++|.+.+.+|..+..+++|++|+|++|+
T Consensus 399 L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 477 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477 (768)
T ss_dssp EECCSSEEEEECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EECCCCccccccCHHHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence 66666666666666665543 57778888888888888888888888888888888888888888888888888888888
Q ss_pred ccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccc
Q 036011 409 LEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSN 488 (977)
Q Consensus 409 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 488 (977)
+++.+|..+..+++|++|++++|++++.+|.+++.+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|..
T Consensus 478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888887766654
Q ss_pred c----------------------------------------------------------------------ccccccCee
Q 036011 489 I----------------------------------------------------------------------QNLQVLINL 498 (977)
Q Consensus 489 ~----------------------------------------------------------------------~~l~~L~~L 498 (977)
+ ..+++|++|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 3 335678999
Q ss_pred eCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCccc
Q 036011 499 DLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLE 578 (977)
Q Consensus 499 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 578 (977)
||++|+++|.+|..++.+++|+.|+|++|+++|.+|..|+++++|++|||++|+++|.+|..+..+++|++||+++|+++
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcCCCCCcccCccccCCCccCCCCCCCCCCCC
Q 036011 579 GEIPANGPFKYFAPQSFSWNYALCGPTTLQVPPCRANKTEG 619 (977)
Q Consensus 579 ~~~p~~~~~~~~~~~~~~~n~~lcg~~~~~~~~~~~~~~~~ 619 (977)
|.||..++|.+|+..+|.||+++||+| +++|....++.
T Consensus 718 g~iP~~~~~~~~~~~~~~gN~~Lcg~~---l~~C~~~~~~~ 755 (768)
T 3rgz_A 718 GPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSNADG 755 (768)
T ss_dssp EECCSSSSGGGSCGGGGCSCTEEESTT---SCCCCSCC---
T ss_pred ccCCCchhhccCCHHHhcCCchhcCCC---CcCCCCCccCC
Confidence 999999999999999999999999998 34887664443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.4e-64 Score=625.39 Aligned_cols=520 Identities=33% Similarity=0.467 Sum_probs=417.0
Q ss_pred CCcEEEEEcCCCCCCccCCc--cccCcccccEeeccCCcccccCCCCc-CCCCCCCEEeCcCccCCCCCCcc--------
Q 036011 49 HQRVRALNLSNMGLRGTIPP--HLGNFSFLMSLDISKNNFHAYLPNEL-GQLRRLRFISLDYNEFSGSFPSW-------- 117 (977)
Q Consensus 49 ~~~v~~L~l~~~~l~~~~~~--~l~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~-------- 117 (977)
..++++|||++|.+.|.+|. .++++++|++|||++|.+++..|..+ .++++|++|+|++|++++..|..
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~ 178 (768)
T 3rgz_A 99 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCG 178 (768)
T ss_dssp CTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCT
T ss_pred CCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCC
Confidence 35688999999999999998 89999999999999999988777765 66666777666666666544432
Q ss_pred -----------------ccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecc
Q 036011 118 -----------------IGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYN 180 (977)
Q Consensus 118 -----------------~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n 180 (977)
++.+++|++|+|++|.+++.+|. +.++++|++|++++|.+++.+|..|+++++|++|+|++|
T Consensus 179 ~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n 257 (768)
T 3rgz_A 179 ELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSN 257 (768)
T ss_dssp TCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSS
T ss_pred CCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCC
Confidence 14566777777777777776666 777777777777777777777777777777777766666
Q ss_pred ccccc----------------------CCccccCC-CCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCC
Q 036011 181 NLQGE----------------------IPSEIGNL-QNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLP 237 (977)
Q Consensus 181 ~i~~~----------------------~p~~l~~l-~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 237 (977)
++++. +|..+.++ ++|++|++++|++++.+|..+..+++|+.|+|++|++.+ .+|
T Consensus 258 ~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~ip 335 (768)
T 3rgz_A 258 QFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSG--ELP 335 (768)
T ss_dssp CCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEE--ECC
T ss_pred cccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccC--cCC
Confidence 66554 44444443 556666666666555555556666666666666666553 234
Q ss_pred CccccCCCCceEEEecCceeeecCCccccccc-ccceEeeccccccccccccccc--ccccccccccccccCCCCCCchh
Q 036011 238 PKVSYSLPNLRVFSLGKNKLTGTIPNSITNAS-KLTGLDLSFNSFSGLIPHTFGN--LRFLSVLNLANNYLTTDSPTAEW 314 (977)
Q Consensus 238 ~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~~~~~~ 314 (977)
...+..+++|++|+|++|++++.+|..+..++ +|++|++++|++++.+|..+.. +++|++|++++|.+++..|.
T Consensus 336 ~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~--- 412 (768)
T 3rgz_A 336 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP--- 412 (768)
T ss_dssp HHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCG---
T ss_pred HHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCH---
Confidence 44455566666666666666666666666665 6666666666666655555555 56677777777766654443
Q ss_pred hhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhh
Q 036011 315 SFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVG 394 (977)
Q Consensus 315 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 394 (977)
.+..+++|++|++++|.+.+..|..++.+. +|+.|++.+|++++.+|..+..+++|++|++++|.+++.+|..++
T Consensus 413 ----~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 487 (768)
T 3rgz_A 413 ----TLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS 487 (768)
T ss_dssp ----GGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred ----HHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHh
Confidence 488999999999999999999999888775 799999999999999999999999999999999999999999999
Q ss_pred ccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccc---------
Q 036011 395 RLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSF--------- 465 (977)
Q Consensus 395 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~--------- 465 (977)
.+++|++|+|++|++++.+|.++..+++|++|++++|++++.+|..+..+++|++|++++|+++|.+|..+
T Consensus 488 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~ 567 (768)
T 3rgz_A 488 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA 567 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCC
T ss_pred cCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999988777644
Q ss_pred -------------------------------------------------------------cCcccCceEEccCCCCCCC
Q 036011 466 -------------------------------------------------------------WSLEYLLAVNLSSNSLSGS 484 (977)
Q Consensus 466 -------------------------------------------------------------~~l~~L~~L~L~~N~l~~~ 484 (977)
..+++|+.|+|++|+++|.
T Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ 647 (768)
T 3rgz_A 568 NFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGY 647 (768)
T ss_dssp STTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSC
T ss_pred hccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCccccc
Confidence 3357899999999999999
Q ss_pred CccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccc
Q 036011 485 LPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEAL 564 (977)
Q Consensus 485 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 564 (977)
+|..|+++++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++++++|++|||++|+++|.+|.. ..+
T Consensus 648 ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~ 726 (768)
T 3rgz_A 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQF 726 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSG
T ss_pred CCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999975 456
Q ss_pred cccCccccCCCc-cccc
Q 036011 565 LFLKQLNVSHNK-LEGE 580 (977)
Q Consensus 565 ~~L~~L~l~~N~-l~~~ 580 (977)
..+....+.+|+ +.|.
T Consensus 727 ~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 727 ETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp GGSCGGGGCSCTEEEST
T ss_pred ccCCHHHhcCCchhcCC
Confidence 667778888997 5553
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-59 Score=574.18 Aligned_cols=553 Identities=23% Similarity=0.226 Sum_probs=444.7
Q ss_pred CCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEe
Q 036011 49 HQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILS 128 (977)
Q Consensus 49 ~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 128 (977)
..++++|+|+++++++..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+.+++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 35799999999999976667899999999999999999998899999999999999999999954445799999999999
Q ss_pred ccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCcccc--CCCCCceEEeeccCC
Q 036011 129 LRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIG--NLQNLEILVLGMNNL 206 (977)
Q Consensus 129 L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~--~l~~L~~L~l~~N~l 206 (977)
|++|.+++..|..|.++++|++|++++|.+.+..|..++++++|++|++++|++++..+..++ .+++|+.|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999988888999999999999999999999999999999999999999999977666654 568999999999999
Q ss_pred CCCCchhhccccc---------------------------eeEEEccCCcccccccCCCccccCCC--CceEEEecCcee
Q 036011 207 SGPIQPSIFNIST---------------------------ITLINLFGNQLSGHLDLPPKVSYSLP--NLRVFSLGKNKL 257 (977)
Q Consensus 207 ~~~~~~~l~~l~~---------------------------L~~L~L~~N~l~~~~~~~~~~~~~l~--~L~~L~L~~N~l 257 (977)
++..+..+..+.+ |+.|++++|.+++ +++..+..++ +|++|+|++|++
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~---~~~~~~~~l~~~~L~~L~Ls~n~l 260 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLST---TSNTTFLGLKWTNLTMLDLSYNNL 260 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCE---ECTTTTGGGGGSCCCEEECTTSCC
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccc---cChhHhhccCcCCCCEEECCCCCc
Confidence 9888887776654 4555666666653 3344444443 488888888888
Q ss_pred eecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhh--hhcccccCCCCceEEecCCC
Q 036011 258 TGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWS--FLSSLTNCRNLTTLAVASNP 335 (977)
Q Consensus 258 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--~~~~l~~l~~L~~L~L~~N~ 335 (977)
++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|......+..... -...+..+++|++|++++|.
T Consensus 261 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~ 340 (680)
T 1ziw_A 261 NVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDND 340 (680)
T ss_dssp CEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCC
T ss_pred CccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCc
Confidence 8777777888888888888888888877778888888888888876544211100000 00136788899999999999
Q ss_pred CCCCCCcccccccccccccccccCccccc--CCcccccc--ccccEEEeecCccCCCCChhhhccCCCCEEEeecccccC
Q 036011 336 LRGILPPVIGNFSASLQNFYAYDCKLTGN--IPHEIGNL--RSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEG 411 (977)
Q Consensus 336 l~~~~p~~~~~~~~~L~~L~l~~n~l~~~--~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 411 (977)
+.+..+..+..+. +|++|++++|.+... .+..|..+ ++|+.|++++|++++..|.+|..+++|++|+|++|.+++
T Consensus 341 l~~~~~~~~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 419 (680)
T 1ziw_A 341 IPGIKSNMFTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQ 419 (680)
T ss_dssp BCCCCTTTTTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEE
T ss_pred cCCCChhHhcccc-CCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCcc
Confidence 9987777776654 688888888875432 22334333 578888999999988888889999999999999999887
Q ss_pred ccc-cccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCC--CCCCccccCcccCceEEccCCCCCCCCccc
Q 036011 412 SIP-YDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFS--SSIPSSFWSLEYLLAVNLSSNSLSGSLPSN 488 (977)
Q Consensus 412 ~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 488 (977)
.+| ..+.++++|+.|++++|++.+..+..|..+++|+.|++++|.+. +..|..|.++++|+.|++++|++++..+..
T Consensus 420 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~ 499 (680)
T 1ziw_A 420 ELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM 499 (680)
T ss_dssp ECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred ccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhh
Confidence 665 67888999999999999988888888888999999999999886 567888889999999999999999877788
Q ss_pred cccccccCeeeCcCCcCCCCcc--------hhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcc
Q 036011 489 IQNLQVLINLDLSRNQLSGDIP--------ITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKS 560 (977)
Q Consensus 489 ~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 560 (977)
|.++++|++|+|++|++++..+ ..|..+++|+.|+|++|+++...+..|.++++|+.|||++|+|++..+..
T Consensus 500 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~ 579 (680)
T 1ziw_A 500 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV 579 (680)
T ss_dssp TTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred hccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhH
Confidence 8899999999999998875322 23788889999999999998655567889999999999999998666666
Q ss_pred cccccccCccccCCCcccccCCCCC--CCCcCCCCCcccCccccCCC
Q 036011 561 LEALLFLKQLNVSHNKLEGEIPANG--PFKYFAPQSFSWNYALCGPT 605 (977)
Q Consensus 561 ~~~l~~L~~L~l~~N~l~~~~p~~~--~~~~~~~~~~~~n~~lcg~~ 605 (977)
|..+++|+.|++++|++++.+|... .+.......+++|+..|...
T Consensus 580 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 580 FNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred hCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 7888999999999999988766421 24455556678898888644
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.3e-58 Score=564.98 Aligned_cols=531 Identities=21% Similarity=0.222 Sum_probs=460.0
Q ss_pred EEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcC
Q 036011 54 ALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNS 133 (977)
Q Consensus 54 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 133 (977)
.+|+++++++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|..++.+++|++|+|++|.
T Consensus 8 ~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 84 (680)
T 1ziw_A 8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84 (680)
T ss_dssp EEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSC
T ss_pred eeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCc
Confidence 4788888887 7888775 789999999999999777889999999999999999998889999999999999999999
Q ss_pred CCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchh
Q 036011 134 FTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPS 213 (977)
Q Consensus 134 l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~ 213 (977)
+++..+..|.++++|++|++++|.+.+..|..|+++++|++|+|++|++++..|..++++++|++|++++|++++..+..
T Consensus 85 l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 164 (680)
T 1ziw_A 85 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEE 164 (680)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHH
T ss_pred cCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHH
Confidence 99766668999999999999999999888899999999999999999999888999999999999999999999887776
Q ss_pred hc--cccceeEEEccCCcccccccCCCccccCC---------------------------CCceEEEecCceeeecCCcc
Q 036011 214 IF--NISTITLINLFGNQLSGHLDLPPKVSYSL---------------------------PNLRVFSLGKNKLTGTIPNS 264 (977)
Q Consensus 214 l~--~l~~L~~L~L~~N~l~~~~~~~~~~~~~l---------------------------~~L~~L~L~~N~l~~~~p~~ 264 (977)
+. .+++|+.|++++|++++ +++..+..+ ++|+.|++++|++++..|..
T Consensus 165 ~~~~~~~~L~~L~L~~n~l~~---~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~ 241 (680)
T 1ziw_A 165 LDIFANSSLKKLELSSNQIKE---FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241 (680)
T ss_dssp HGGGTTCEESEEECTTCCCCC---BCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT
T ss_pred hhccccccccEEECCCCcccc---cChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH
Confidence 64 45899999999999984 444444332 56888999999999888999
Q ss_pred cccccc--cceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCC---
Q 036011 265 ITNASK--LTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGI--- 339 (977)
Q Consensus 265 l~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~--- 339 (977)
+..+.. |++|+|++|++++..|..|..+++|++|++++|.+++..+.. +..+++|+.|++++|...+.
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~l~~L~~L~L~~~~~~~~~~~ 314 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS-------LHGLFNVRYLNLKRSFTKQSISL 314 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTT-------TTTCTTCCEEECTTCBCCC----
T ss_pred hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhh-------hcCCCCccEEeccchhhhccccc
Confidence 988866 999999999999998899999999999999999999877654 88899999999998866542
Q ss_pred --CCc----ccccccccccccccccCcccccCCccccccccccEEEeecCccCC--CCChhhhcc--CCCCEEEeecccc
Q 036011 340 --LPP----VIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNG--TIPSTVGRL--EQLQGLSLYGNNL 409 (977)
Q Consensus 340 --~p~----~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l--~~L~~L~L~~N~l 409 (977)
+|. .+. ...+|++|++.+|++++..+..|..+++|++|++++|.+.. ..+..|..+ ++|+.|++++|++
T Consensus 315 ~~lp~i~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l 393 (680)
T 1ziw_A 315 ASLPKIDDFSFQ-WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKI 393 (680)
T ss_dssp --CCEECTTTTT-TCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCC
T ss_pred ccccccChhhcc-cCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCC
Confidence 222 222 23579999999999999999999999999999999998543 223344443 5899999999999
Q ss_pred cCccccccccccccceeeecCCccCCCch-hhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCC--CCCc
Q 036011 410 EGSIPYDLCHLERLNGIRLNGNKLSGPIP-QCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLS--GSLP 486 (977)
Q Consensus 410 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p 486 (977)
++..|..+..+++|+.|++++|++++.+| ..+..+++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|
T Consensus 394 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p 473 (680)
T 1ziw_A 394 SKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSP 473 (680)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSS
T ss_pred CeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCC
Confidence 99889999999999999999999987665 78999999999999999999999999999999999999999987 5789
Q ss_pred cccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcccccccc--------ccccCccccCeeeccCCccCCCCC
Q 036011 487 SNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIP--------QTFGSLTGLESLDLSNNNLSGEIP 558 (977)
Q Consensus 487 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p 558 (977)
..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..+ ..|.++++|+.|+|++|+++...+
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~ 553 (680)
T 1ziw_A 474 SPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPV 553 (680)
T ss_dssp CTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCT
T ss_pred cccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCH
Confidence 999999999999999999998778889999999999999999996532 237899999999999999995444
Q ss_pred cccccccccCccccCCCcccccCCCC-CCCCcCCCCCcccC
Q 036011 559 KSLEALLFLKQLNVSHNKLEGEIPAN-GPFKYFAPQSFSWN 598 (977)
Q Consensus 559 ~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n 598 (977)
..|..+++|+.|++++|++++..|.. ..+.......+++|
T Consensus 554 ~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 554 EVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred HHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 57899999999999999999655542 23344444445666
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7e-59 Score=561.89 Aligned_cols=512 Identities=21% Similarity=0.203 Sum_probs=380.3
Q ss_pred EEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCC
Q 036011 55 LNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSF 134 (977)
Q Consensus 55 L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 134 (977)
++.++.+++ .+|..+.. .+++|||++|++++..|.+|+++++|++|+|++|++++..|..|+.+++|++|+|++|++
T Consensus 17 ~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp EECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 334444444 44444432 455555555555555555555555555555555555544455555555555555555555
Q ss_pred CCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhh
Q 036011 135 TGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSI 214 (977)
Q Consensus 135 ~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l 214 (977)
++..|..|.++++|++|++++|.+++..|..++++++|++|++++|++++..+..+.++++|++|++++|++++..+..+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 55555555555555555555555554445555555555555555555554222333335555555555555555555555
Q ss_pred cccccee--EEEccCCcccccccCCCccccCCCCceEEEecCce---------------------ee-----ecCCcccc
Q 036011 215 FNISTIT--LINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNK---------------------LT-----GTIPNSIT 266 (977)
Q Consensus 215 ~~l~~L~--~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~---------------------l~-----~~~p~~l~ 266 (977)
..+++|+ .|++++|.+++ +++..+ ...+|+.|++++|. +. ...+..+.
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~---~~~~~~-~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAG---IEPGAF-DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCE---ECTTTT-TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhhcccceeEEecCCCccCc---cChhHh-hhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhc
Confidence 5555555 55555555552 223332 22455555555443 11 11122233
Q ss_pred ccc--ccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCccc
Q 036011 267 NAS--KLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVI 344 (977)
Q Consensus 267 ~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 344 (977)
.+. +|++|++++|+++++.+..|..+++|++|++++|.++.++.. +..+++|++|++++|.+.+..|..+
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~--------l~~l~~L~~L~l~~n~l~~~~~~~~ 321 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSG--------LVGLSTLKKLVLSANKFENLCQISA 321 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSS--------CCSCTTCCEEECTTCCCSBGGGGCG
T ss_pred hhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChh--------hcccccCCEEECccCCcCcCchhhh
Confidence 332 788999999999988888899999999999999999876543 7888999999999999998777777
Q ss_pred ccccccccccccccCcccccCCcc-ccccccccEEEeecCccCCCC--ChhhhccCCCCEEEeecccccCcccccccccc
Q 036011 345 GNFSASLQNFYAYDCKLTGNIPHE-IGNLRSLIVLSLFINALNGTI--PSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLE 421 (977)
Q Consensus 345 ~~~~~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 421 (977)
..+. +|+.|++.+|.+.+.+|.. +..+++|++|++++|.+++.. +..++.+++|++|++++|.+++..|..+..++
T Consensus 322 ~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 400 (606)
T 3t6q_A 322 SNFP-SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP 400 (606)
T ss_dssp GGCT-TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCT
T ss_pred hccC-cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCc
Confidence 6664 7999999999998777655 899999999999999999766 78899999999999999999988899999999
Q ss_pred ccceeeecCCccCCCchh-hhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCC---CCccccccccccCe
Q 036011 422 RLNGIRLNGNKLSGPIPQ-CLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSG---SLPSNIQNLQVLIN 497 (977)
Q Consensus 422 ~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~ 497 (977)
+|+.|++++|++++..|. .+..+++|++|++++|.+.+..|..|..+++|+.|++++|++++ ..+..+..+++|++
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~ 480 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEI 480 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCE
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccE
Confidence 999999999999877664 48999999999999999999999999999999999999999986 23467999999999
Q ss_pred eeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcc
Q 036011 498 LDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKL 577 (977)
Q Consensus 498 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 577 (977)
|+|++|++++..|..|+.+++|+.|+|++|++++.+|..+.++++| .|+|++|++++..|..+..+++|+.|++++|++
T Consensus 481 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 559 (606)
T 3t6q_A 481 LVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPL 559 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCE
T ss_pred EECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCc
Confidence 9999999998889999999999999999999999999999999999 999999999988898999999999999999999
Q ss_pred cccCCC
Q 036011 578 EGEIPA 583 (977)
Q Consensus 578 ~~~~p~ 583 (977)
++.++.
T Consensus 560 ~c~c~~ 565 (606)
T 3t6q_A 560 DCTCSN 565 (606)
T ss_dssp ECSGGG
T ss_pred cccCCc
Confidence 998763
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.1e-59 Score=565.83 Aligned_cols=490 Identities=18% Similarity=0.258 Sum_probs=303.7
Q ss_pred ChHHHHHHHHHHHHhccCCCCCccC-------CCCCCCCCCcc---cceEecCCCCcEEEEEcCCCCCCccCCccccCcc
Q 036011 5 NLTTDQFALLAFKAHVTDPQSVLAN-------NWSISQPICKW---VGISCGARHQRVRALNLSNMGLRGTIPPHLGNFS 74 (977)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~-------~w~~~~~~c~w---~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~ 74 (977)
....|+.||.+|+.++.++.|.... +|+.++|||.| .||+|+.. ++|+.|+|+++++.|.+|+++++++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCc
Confidence 4457999999999999877665433 79999999999 99999865 8999999999999999999999999
Q ss_pred cccEeeccCCccc------c------cCCCCcCCCCCCCEEeCcCccCCCCCCccccc-cccCcEEecc-----------
Q 036011 75 FLMSLDISKNNFH------A------YLPNELGQLRRLRFISLDYNEFSGSFPSWIGV-LSKLQILSLR----------- 130 (977)
Q Consensus 75 ~L~~L~L~~n~l~------~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~----------- 130 (977)
+|++|||++|.+. + .+|... +..|+ +++++|.+.+.+|..++. +..+..+++.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 9999999999873 2 233333 56677 888899888888887763 2333333333
Q ss_pred ---------CcCCCCCCCCcccCcCcccceeccccccccc-----------------cCcccc--Cccccceeeeecccc
Q 036011 131 ---------NNSFTGPIPNSLFNLSRLEKWDSMFNIIDGN-----------------IPSRIG--NLSSLVNVNLAYNNL 182 (977)
Q Consensus 131 ---------~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~-----------------~p~~~~--~l~~L~~L~L~~n~i 182 (977)
+|++++ +|..++++++|++|+|++|.+++. +|+.++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 466666 666666677777777777766664 666666 677777777777776
Q ss_pred cccCCccccCCCCCceEEeeccC-CCC-CCchhhccc------cceeEEEccCCcccccccCCC-ccccCCCCceEEEec
Q 036011 183 QGEIPSEIGNLQNLEILVLGMNN-LSG-PIQPSIFNI------STITLINLFGNQLSGHLDLPP-KVSYSLPNLRVFSLG 253 (977)
Q Consensus 183 ~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~~~~l~~l------~~L~~L~L~~N~l~~~~~~~~-~~~~~l~~L~~L~L~ 253 (977)
.+.+|..|+++++|++|++++|+ +++ .+|..+..+ ++|+.|+|++|+++ .+|. ..+..+++|++|+++
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~---~ip~~~~l~~l~~L~~L~L~ 338 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK---TFPVETSLQKMKKLGMLECL 338 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS---SCCCHHHHTTCTTCCEEECC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC---ccCchhhhccCCCCCEEeCc
Confidence 66667667777777777777776 666 566666655 66666666666665 3443 244556666666666
Q ss_pred CceeeecCCcccccccccceEeecccccccccccccccccc-cccccccccccCCCCCCchhhhhccccc--CCCCceEE
Q 036011 254 KNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRF-LSVLNLANNYLTTDSPTAEWSFLSSLTN--CRNLTTLA 330 (977)
Q Consensus 254 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~~~l~~--l~~L~~L~ 330 (977)
+|+++|.+| .+..+++|++|+|++|+++ .+|..+..+++ |++|++++|.++.++.. +.. +++|++|+
T Consensus 339 ~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~--------~~~~~l~~L~~L~ 408 (636)
T 4eco_A 339 YNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNI--------FDAKSVSVMSAID 408 (636)
T ss_dssp SCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSC--------CCTTCSSCEEEEE
T ss_pred CCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchh--------hhhcccCccCEEE
Confidence 666666666 6666666666666666666 44555666666 66666666666543321 222 22455555
Q ss_pred ecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeeccccc
Q 036011 331 VASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLE 410 (977)
Q Consensus 331 L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 410 (977)
+++|.+.+..|..+.... .....+++|++|+|++|.+++..+..+..+++|++|+|++|+++
T Consensus 409 Ls~N~l~~~~p~~l~~~~------------------~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 409 FSYNEIGSVDGKNFDPLD------------------PTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp CCSSCTTTTTTCSSCTTC------------------SSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS
T ss_pred CcCCcCCCcchhhhcccc------------------cccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC
Confidence 555555444333221100 00015567777777777777444444555777777777777776
Q ss_pred Ccccccccc-c-------cccceeeecCCccCCCchhhhc--CCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCC
Q 036011 411 GSIPYDLCH-L-------ERLNGIRLNGNKLSGPIPQCLA--SLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNS 480 (977)
Q Consensus 411 ~~~p~~~~~-l-------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 480 (977)
.+|..+.. . ++|+.|+|++|+++ .+|..+. .+++|++|+|++|+|++ +|..+..+++|+.|+|++|+
T Consensus 471 -~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~ 547 (636)
T 4eco_A 471 -EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR 547 (636)
T ss_dssp -BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB
T ss_pred -CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc
Confidence 44433222 1 14455555555544 3444443 44444444444444443 44444444444444444433
Q ss_pred CCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccC
Q 036011 481 LSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLS 554 (977)
Q Consensus 481 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 554 (977)
++++|++.+.+|..++.+++|+.|+|++|++ +.+|..+. ++|+.|||++|++.
T Consensus 548 ------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 548 ------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp ------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred ------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 2344555555555555555555555555555 24454443 45555555555544
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.3e-57 Score=548.61 Aligned_cols=511 Identities=21% Similarity=0.193 Sum_probs=357.7
Q ss_pred cEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEecc
Q 036011 51 RVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLR 130 (977)
Q Consensus 51 ~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 130 (977)
++++|+|+++++++..+..++++++|++|+|++|++++..|.+|.++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 34445555555544333444455555555555555544444444455555555555555444444445555555555555
Q ss_pred CcCCCCCCCCcccCcCcccceecccccccc-ccCccccCccccceeeeecccccccCCccccCCCCCc----eEEeeccC
Q 036011 131 NNSFTGPIPNSLFNLSRLEKWDSMFNIIDG-NIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLE----ILVLGMNN 205 (977)
Q Consensus 131 ~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~-~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~----~L~l~~N~ 205 (977)
+|.+++..|..++++++|++|++++|.+.+ .+|..|+++++|++|++++|++++..|..|+.+++|+ .|++++|+
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~ 192 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCC
Confidence 555444444444455555555555554443 3344455555555555555555444444444444333 44555554
Q ss_pred CCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeee---------cCCcccccccccceEee
Q 036011 206 LSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTG---------TIPNSITNASKLTGLDL 276 (977)
Q Consensus 206 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~---------~~p~~l~~l~~L~~L~L 276 (977)
+++..+..+ ...+|+.|++++|.+.+. ..+..+..+++|+.+++..+.+.+ ..+..+..+ +++.+++
T Consensus 193 l~~~~~~~~-~~~~L~~L~L~~n~~~~~--~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l-~l~~l~l 268 (606)
T 3vq2_A 193 IDFIQDQAF-QGIKLHELTLRGNFNSSN--IMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV-TIDEFRL 268 (606)
T ss_dssp CCEECTTTT-TTCEEEEEEEESCCSCHH--HHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGS-EEEEEEE
T ss_pred cceeCcccc-cCceeeeeeccCCccchh--HHHHHhccccccccccccccccccCCcccccChHHhhhhhhc-cHhheec
Confidence 443222222 222445555554444321 112223344444444443332221 001111111 3444555
Q ss_pred -cccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccc
Q 036011 277 -SFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFY 355 (977)
Q Consensus 277 -s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~ 355 (977)
..|.+++.+|. +..+++|+.|++++|.+..++ .+..+++|++|++++|.+ +.+|.. ..++|+.|+
T Consensus 269 ~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~---------~l~~~~~L~~L~l~~n~l-~~lp~~---~l~~L~~L~ 334 (606)
T 3vq2_A 269 TYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE---------DVPKHFKWQSLSIIRCQL-KQFPTL---DLPFLKSLT 334 (606)
T ss_dssp CCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC---------CCCTTCCCSEEEEESCCC-SSCCCC---CCSSCCEEE
T ss_pred cccccccccccc-cccCCCCCEEEecCccchhhh---------hccccccCCEEEcccccC-cccccC---CCCccceee
Confidence 77778877777 899999999999999998765 278889999999999999 667743 446899999
Q ss_pred cccCcccccCCccccccccccEEEeecCccCCC--CChhhhccCCCCEEEeecccccCccccccccccccceeeecCCcc
Q 036011 356 AYDCKLTGNIPHEIGNLRSLIVLSLFINALNGT--IPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKL 433 (977)
Q Consensus 356 l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 433 (977)
+.+|+..+.+ .+..+++|++|++++|.+++. .|..+..+++|++|++++|.++ .+|..+..+++|+.|++++|++
T Consensus 335 l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l 411 (606)
T 3vq2_A 335 LTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTL 411 (606)
T ss_dssp EESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEE
T ss_pred ccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCcc
Confidence 9999766544 677999999999999999866 4899999999999999999998 4678899999999999999999
Q ss_pred CCCch-hhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCC-CCccccccccccCeeeCcCCcCCCCcch
Q 036011 434 SGPIP-QCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSG-SLPSNIQNLQVLINLDLSRNQLSGDIPI 511 (977)
Q Consensus 434 ~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 511 (977)
.+..| ..+..+++|++|++++|++.+..|..|..+++|+.|++++|++++ .+|..|..+++|++|+|++|++++..|.
T Consensus 412 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 491 (606)
T 3vq2_A 412 KRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWG 491 (606)
T ss_dssp ESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred CCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChh
Confidence 98877 689999999999999999999999999999999999999999997 4788999999999999999999988889
Q ss_pred hhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCccccccc-ccCccccCCCcccccCCC
Q 036011 512 TIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALL-FLKQLNVSHNKLEGEIPA 583 (977)
Q Consensus 512 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~ 583 (977)
.|+.+++|+.|+|++|++++.+|..|+++++|+.|||++|+|+ .+|..+..++ +|++|++++|++.+..+-
T Consensus 492 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 492 VFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred hhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999999999999999999989999999999999999999999 7888899987 599999999999998774
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.6e-57 Score=554.97 Aligned_cols=498 Identities=20% Similarity=0.246 Sum_probs=367.3
Q ss_pred cChHHHHHHHHHHHHhccCCCCCccCCCCCCC-----CC--Ccc------------cceEecCCCCcEEEEEcCCCCCCc
Q 036011 4 QNLTTDQFALLAFKAHVTDPQSVLANNWSISQ-----PI--CKW------------VGISCGARHQRVRALNLSNMGLRG 64 (977)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~L~l~~~~l~~ 64 (977)
.+..+|++||++||+++.+| +|+.+. +| |.| .||+|+. .++|+.|+|+++++.|
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKG 337 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEE
T ss_pred ccchHHHHHHHHHHHHcCCC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCC
Confidence 45568999999999999877 454332 55 999 9999987 6899999999999999
Q ss_pred cCCccccCcccccEeec-cCCcccccCCCCcC------------------------------------------------
Q 036011 65 TIPPHLGNFSFLMSLDI-SKNNFHAYLPNELG------------------------------------------------ 95 (977)
Q Consensus 65 ~~~~~l~~l~~L~~L~L-~~n~l~~~~p~~~~------------------------------------------------ 95 (977)
.+|+++++|++|++||| ++|.+.|..|-...
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 88988875332211
Q ss_pred ---CCCCCCEEeCcC--ccCCCCCCccccccccCcEEeccCcCCCC-CCCCcccCcCcccceeccccccccccCcccc--
Q 036011 96 ---QLRRLRFISLDY--NEFSGSFPSWIGVLSKLQILSLRNNSFTG-PIPNSLFNLSRLEKWDSMFNIIDGNIPSRIG-- 167 (977)
Q Consensus 96 ---~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~-- 167 (977)
....++.+.+.. |++++ +|..|+++++|++|+|++|.+++ .+|..+. .++.|...+.+|+.++
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~--------~~s~n~~~g~iP~~l~f~ 488 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE--------DANSDYAKQYENEELSWS 488 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS--------CTTSHHHHHHTTSCCCGG
T ss_pred ccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccc--------ccccccccccCChhhhhc
Confidence 111222223322 55554 55555555555555555555554 1111111 1111333346888877
Q ss_pred CccccceeeeecccccccCCccccCCCCCceEEeeccC-CCC-CCchhhcccc-------ceeEEEccCCcccccccCCC
Q 036011 168 NLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNN-LSG-PIQPSIFNIS-------TITLINLFGNQLSGHLDLPP 238 (977)
Q Consensus 168 ~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~~~~l~~l~-------~L~~L~L~~N~l~~~~~~~~ 238 (977)
++++|++|+|++|++.+.+|..|+++++|+.|+|++|+ +++ .+|..+..+. +|+.|+|++|+++ .+|.
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~---~ip~ 565 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE---EFPA 565 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC---BCCC
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC---ccCC
Confidence 88888888888888888888888888888888888887 887 7787777766 8888888888887 4555
Q ss_pred -ccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccc-cccccccccccCCCCCCchhhh
Q 036011 239 -KVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRF-LSVLNLANNYLTTDSPTAEWSF 316 (977)
Q Consensus 239 -~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~ 316 (977)
..+..+++|++|+|++|+++ .+| .+..+++|++|+|++|+++ .+|..+..+++ |+.|+|++|.++.++..
T Consensus 566 ~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~----- 637 (876)
T 4ecn_A 566 SASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNI----- 637 (876)
T ss_dssp HHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCSC-----
T ss_pred hhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCchh-----
Confidence 35668889999999999998 778 8888999999999999998 67788889988 99999999998865432
Q ss_pred hcccccC--CCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCcccc--ccccccEEEeecCccCCCCChh
Q 036011 317 LSSLTNC--RNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIG--NLRSLIVLSLFINALNGTIPST 392 (977)
Q Consensus 317 ~~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~ 392 (977)
+..+ ++|+.|++++|.+.+.+|... ..+. .+++|+.|+|++|.++ .+|..
T Consensus 638 ---~~~~~~~~L~~L~Ls~N~l~g~ip~l~----------------------~~l~~~~~~~L~~L~Ls~N~L~-~lp~~ 691 (876)
T 4ecn_A 638 ---FNAKSVYVMGSVDFSYNKIGSEGRNIS----------------------CSMDDYKGINASTVTLSYNEIQ-KFPTE 691 (876)
T ss_dssp ---CCTTCSSCEEEEECCSSCTTTTSSSCS----------------------SCTTTCCCCCEEEEECCSSCCC-SCCHH
T ss_pred ---hhccccCCCCEEECcCCcCCCccccch----------------------hhhccccCCCcCEEEccCCcCC-ccCHH
Confidence 4444 348888888888887655321 1122 3457888999999988 45544
Q ss_pred -hhccCCCCEEEeecccccCcccccccc--------ccccceeeecCCccCCCchhhhc--CCCCCCeeecCCCcCCCCC
Q 036011 393 -VGRLEQLQGLSLYGNNLEGSIPYDLCH--------LERLNGIRLNGNKLSGPIPQCLA--SLISLRELNLGSNKFSSSI 461 (977)
Q Consensus 393 -~~~l~~L~~L~L~~N~l~~~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~ 461 (977)
+..+++|+.|+|++|+|+ .+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +
T Consensus 692 ~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-l 768 (876)
T 4ecn_A 692 LFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-F 768 (876)
T ss_dssp HHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-C
T ss_pred HHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-c
Confidence 457889999999999888 55554433 237777777777777 5666665 77777777777777775 5
Q ss_pred CccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCcc
Q 036011 462 PSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLT 541 (977)
Q Consensus 462 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 541 (977)
|..+..+++|+.|+|++|+ ++++|++.+.+|..++.+++|+.|+|++|+| +.+|..+. +
T Consensus 769 p~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~ 827 (876)
T 4ecn_A 769 PTQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--P 827 (876)
T ss_dssp CCGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--S
T ss_pred chhhhcCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--C
Confidence 6667777777777777665 5566888888888888888888888888888 57777765 5
Q ss_pred ccCeeeccCCccCCCCCcccccccccCccccCCCccc
Q 036011 542 GLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLE 578 (977)
Q Consensus 542 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 578 (977)
+|+.|||++|++....+..+.....+..+.|++|++.
T Consensus 828 ~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 828 QLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp SSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred CCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 8888888888887666667766667777777777664
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.1e-57 Score=543.83 Aligned_cols=516 Identities=21% Similarity=0.157 Sum_probs=454.8
Q ss_pred CCCCCCc--ccceEecCC---------CCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCC
Q 036011 33 ISQPICK--WVGISCGAR---------HQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLR 101 (977)
Q Consensus 33 ~~~~~c~--w~gv~c~~~---------~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 101 (977)
...+.|. +..+.|... ...++.|+|++|.+++..|..++++++|++|+|++|++++..|.+|.++++|+
T Consensus 5 ~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 84 (606)
T 3t6q_A 5 DQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLD 84 (606)
T ss_dssp -CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCC
T ss_pred cCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccC
Confidence 3344443 455778532 34689999999999987788999999999999999999998999999999999
Q ss_pred EEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeeccc
Q 036011 102 FISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNN 181 (977)
Q Consensus 102 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 181 (977)
+|+|++|++++..|..|+.+++|++|+|++|.+++..|..+.++++|++|++++|.+.+..+..+..+++|++|++++|+
T Consensus 85 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 164 (606)
T 3t6q_A 85 TLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA 164 (606)
T ss_dssp EEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC
T ss_pred eeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc
Confidence 99999999998889999999999999999999998778899999999999999999997544445559999999999999
Q ss_pred ccccCCccccCCCCCc--eEEeeccCCCCCCchhhccccceeEEEccCCccc-----------------------ccccC
Q 036011 182 LQGEIPSEIGNLQNLE--ILVLGMNNLSGPIQPSIFNISTITLINLFGNQLS-----------------------GHLDL 236 (977)
Q Consensus 182 i~~~~p~~l~~l~~L~--~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-----------------------~~~~~ 236 (977)
+++..|..|+.+++|+ .|++++|++++..+..+ ...+|+.|++++|... ....+
T Consensus 165 l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i 243 (606)
T 3t6q_A 165 IHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAF-DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDI 243 (606)
T ss_dssp CCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTT-TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCC
T ss_pred ccccChhhhhhhcccceeEEecCCCccCccChhHh-hhccccccccCCchhHHHHhhhccccchhheechhhcccccccc
Confidence 9988888999999999 89999999997766554 4578999999987510 01123
Q ss_pred CCccccCCC--CceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchh
Q 036011 237 PPKVSYSLP--NLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEW 314 (977)
Q Consensus 237 ~~~~~~~l~--~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 314 (977)
++..+..+. +|+.|++++|++++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|.++...+.
T Consensus 244 ~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~--- 319 (606)
T 3t6q_A 244 SPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQI--- 319 (606)
T ss_dssp CGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGG---
T ss_pred ChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchh---
Confidence 333343333 7999999999999888888999999999999999999 5678899999999999999999986554
Q ss_pred hhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccC--CccccccccccEEEeecCccCCCCChh
Q 036011 315 SFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNI--PHEIGNLRSLIVLSLFINALNGTIPST 392 (977)
Q Consensus 315 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~ 392 (977)
.+..+++|++|++++|.+.+.+|........+|++|++.+|++++.. +..+..+++|++|++++|.+.+..|..
T Consensus 320 ----~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 395 (606)
T 3t6q_A 320 ----SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEA 395 (606)
T ss_dssp ----CGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTT
T ss_pred ----hhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHH
Confidence 37889999999999999998777654344468999999999999876 888999999999999999999899999
Q ss_pred hhccCCCCEEEeecccccCccccc-cccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCC---CCccccCc
Q 036011 393 VGRLEQLQGLSLYGNNLEGSIPYD-LCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSS---IPSSFWSL 468 (977)
Q Consensus 393 ~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l 468 (977)
|..+++|++|++++|++++..+.. +..+++|+.|++++|++++..|..+..+++|++|++++|++.+. .+..+..+
T Consensus 396 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l 475 (606)
T 3t6q_A 396 FKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTL 475 (606)
T ss_dssp TTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGC
T ss_pred hcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccC
Confidence 999999999999999999876654 89999999999999999999999999999999999999999862 34679999
Q ss_pred ccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeec
Q 036011 469 EYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDL 548 (977)
Q Consensus 469 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 548 (977)
++|+.|++++|++++..|..|..+++|++|+|++|++++..|..+..+++| .|+|++|++++.+|..+..+++|+.|+|
T Consensus 476 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l 554 (606)
T 3t6q_A 476 GRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINL 554 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEEC
T ss_pred CCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeC
Confidence 999999999999999889999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cCCccCCCCC
Q 036011 549 SNNNLSGEIP 558 (977)
Q Consensus 549 s~N~l~~~~p 558 (977)
++|++++..+
T Consensus 555 ~~N~~~c~c~ 564 (606)
T 3t6q_A 555 RQNPLDCTCS 564 (606)
T ss_dssp TTCCEECSGG
T ss_pred CCCCccccCC
Confidence 9999997654
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-56 Score=554.48 Aligned_cols=520 Identities=23% Similarity=0.200 Sum_probs=420.4
Q ss_pred CcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccC-CCCcCCCCCCCEEeCcCccCCCCCCc
Q 036011 38 CKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYL-PNELGQLRRLRFISLDYNEFSGSFPS 116 (977)
Q Consensus 38 c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~ 116 (977)
|.|.+|.+ ...+++.|||++|.+++..|.+++++++|++|||++|.+.+.+ |.+|.++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 45666666 4567888888888888777888888888888888888655444 77888888888888888888877788
Q ss_pred cccccccCcEEeccCcCCCCCCCCc--ccCcCcccceeccccccccccC-ccccCccccceeeeecccccccCCccccCC
Q 036011 117 WIGVLSKLQILSLRNNSFTGPIPNS--LFNLSRLEKWDSMFNIIDGNIP-SRIGNLSSLVNVNLAYNNLQGEIPSEIGNL 193 (977)
Q Consensus 117 ~~~~l~~L~~L~L~~n~l~~~~p~~--l~~l~~L~~L~l~~n~i~~~~p-~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l 193 (977)
+|+.+++|++|+|++|.+++.+|.. +.++++|++|++++|.+.+..+ ..|+++++|++|+|++|.+++..+..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 8888888888888888888766665 8888888888888888887654 578888888888888888888888888877
Q ss_pred --CCCceEEeeccCCCCCCchhhccccc------eeEEEccCCcccccccCCCcccc--CCCCceEEEecCcee------
Q 036011 194 --QNLEILVLGMNNLSGPIQPSIFNIST------ITLINLFGNQLSGHLDLPPKVSY--SLPNLRVFSLGKNKL------ 257 (977)
Q Consensus 194 --~~L~~L~l~~N~l~~~~~~~l~~l~~------L~~L~L~~N~l~~~~~~~~~~~~--~l~~L~~L~L~~N~l------ 257 (977)
++|+.|+++.|.+.+..+..+..+.+ |+.|++++|.+++. .+..... ...+++.|.++.+.+
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~--~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~ 249 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVD--ITGNFSNAISKSQAFSLILAHHIMGAGFGF 249 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTT--TTSGGGGTSCSCCBSEEECCSSCCBCSSSC
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchh--HHHHHHhhcCcccccceecccccccccccc
Confidence 88888888888888877776666554 88888888877642 2222221 235677777763332
Q ss_pred ---eecCCcccccc--cccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEec
Q 036011 258 ---TGTIPNSITNA--SKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVA 332 (977)
Q Consensus 258 ---~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~ 332 (977)
....+..|..+ ++|++|+|++|.+.+..|..|..+++|+.|+|++|.++.+.+.. +..+++|++|+++
T Consensus 250 ~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~-------~~~l~~L~~L~Ls 322 (844)
T 3j0a_A 250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEA-------FYGLDNLQVLNLS 322 (844)
T ss_dssp SSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTT-------TTTCSSCCEEEEE
T ss_pred cccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHH-------hcCCCCCCEEECC
Confidence 22223334433 67999999999998888888999999999999999998876654 7888999999999
Q ss_pred CCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCc
Q 036011 333 SNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGS 412 (977)
Q Consensus 333 ~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 412 (977)
+|.+.+..|..+..+. +|+.|++.+|++.+..+..|..+++|++|+|++|.+++. + .+++|+.|++++|+++ .
T Consensus 323 ~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~-~ 395 (844)
T 3j0a_A 323 YNLLGELYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLV-T 395 (844)
T ss_dssp SCCCSCCCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCC-C
T ss_pred CCCCCccCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCcc-c
Confidence 9999888787777664 689999999999888888899999999999999999843 2 3889999999999998 4
Q ss_pred cccccccccccceeeecCCccCCCc-hhhhcCCCCCCeeecCCCcCCCCCCc-cccCcccCceEEccCCCCC-----CCC
Q 036011 413 IPYDLCHLERLNGIRLNGNKLSGPI-PQCLASLISLRELNLGSNKFSSSIPS-SFWSLEYLLAVNLSSNSLS-----GSL 485 (977)
Q Consensus 413 ~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~ 485 (977)
+|.. ..+++.|++++|++++.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..
T Consensus 396 l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 472 (844)
T 3j0a_A 396 LPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELC 472 (844)
T ss_dssp CCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCC
T ss_pred cccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccc
Confidence 5543 567899999999998642 34467899999999999999965544 4667899999999999997 445
Q ss_pred ccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCccccccc
Q 036011 486 PSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALL 565 (977)
Q Consensus 486 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 565 (977)
+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++..|..|.
T Consensus 473 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~--- 547 (844)
T 3j0a_A 473 WDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV--- 547 (844)
T ss_dssp SSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---
T ss_pred hhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---
Confidence 57789999999999999999988888899999999999999999987777766 8999999999999998887754
Q ss_pred ccCccccCCCcccccCCC
Q 036011 566 FLKQLNVSHNKLEGEIPA 583 (977)
Q Consensus 566 ~L~~L~l~~N~l~~~~p~ 583 (977)
+|+.|++++|++.+.++-
T Consensus 548 ~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 548 SLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCCEEEEEEECCCCSSSC
T ss_pred CcCEEEecCCCccccccc
Confidence 788999999999998763
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.3e-55 Score=528.76 Aligned_cols=491 Identities=19% Similarity=0.158 Sum_probs=431.2
Q ss_pred CCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEe
Q 036011 49 HQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILS 128 (977)
Q Consensus 49 ~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 128 (977)
-.++++|+|++|.+++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++.+++|++|+
T Consensus 55 l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 35799999999999977788899999999999999999998899999999999999999999977778999999999999
Q ss_pred ccCcCCCC-CCCCcccCcCcccceeccccccccccCccccCccccc----eeeeecccccccCCccccCCCCCceEEeec
Q 036011 129 LRNNSFTG-PIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLV----NVNLAYNNLQGEIPSEIGNLQNLEILVLGM 203 (977)
Q Consensus 129 L~~n~l~~-~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~----~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~ 203 (977)
|++|.+++ .+|..+.++++|++|++++|.+++..|..|+.+++|+ +|++++|.+++..+..+... +|+.|++++
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~ 213 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRG 213 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEES
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccC
Confidence 99999987 6799999999999999999999999899999888876 79999999996555555554 999999999
Q ss_pred cCCC-CCCchhhccccceeEEEccCCccccccc---CCCccccCCC--CceEEEe-cCceeeecCCcccccccccceEee
Q 036011 204 NNLS-GPIQPSIFNISTITLINLFGNQLSGHLD---LPPKVSYSLP--NLRVFSL-GKNKLTGTIPNSITNASKLTGLDL 276 (977)
Q Consensus 204 N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~---~~~~~~~~l~--~L~~L~L-~~N~l~~~~p~~l~~l~~L~~L~L 276 (977)
|.+. +..+..+.+++.|+.+++..+.+.+... ++...+..+. +++.+++ ..|.+.+.+|. +..+++|++|++
T Consensus 214 n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l 292 (606)
T 3vq2_A 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSL 292 (606)
T ss_dssp CCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEE
T ss_pred CccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEe
Confidence 9997 4567778899999999987666543222 1222222222 4667777 78888888777 999999999999
Q ss_pred cccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCccccccccccccccc
Q 036011 277 SFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYA 356 (977)
Q Consensus 277 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l 356 (977)
++|.+..+ | .+..+++|+.|++++|.+..++ . + .+++|++|++++|...+.. .+. ..++|+.|++
T Consensus 293 ~~~~~~~l-~-~l~~~~~L~~L~l~~n~l~~lp-~--------~-~l~~L~~L~l~~n~~~~~~--~~~-~l~~L~~L~l 357 (606)
T 3vq2_A 293 AGVSIKYL-E-DVPKHFKWQSLSIIRCQLKQFP-T--------L-DLPFLKSLTLTMNKGSISF--KKV-ALPSLSYLDL 357 (606)
T ss_dssp ESCCCCCC-C-CCCTTCCCSEEEEESCCCSSCC-C--------C-CCSSCCEEEEESCSSCEEC--CCC-CCTTCCEEEC
T ss_pred cCccchhh-h-hccccccCCEEEcccccCcccc-c--------C-CCCccceeeccCCcCccch--hhc-cCCCCCEEEC
Confidence 99999865 4 8999999999999999996654 1 5 8899999999999655433 233 3357999999
Q ss_pred ccCccccc--CCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccc-cccccccccceeeecCCcc
Q 036011 357 YDCKLTGN--IPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIP-YDLCHLERLNGIRLNGNKL 433 (977)
Q Consensus 357 ~~n~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l 433 (977)
++|++++. +|..+..+++|++|++++|.++ .+|..+..+++|++|++++|++.+..| ..+..+++|+.|++++|++
T Consensus 358 s~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l 436 (606)
T 3vq2_A 358 SRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436 (606)
T ss_dssp CSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCC
T ss_pred cCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCC
Confidence 99999976 4889999999999999999998 477899999999999999999998877 6899999999999999999
Q ss_pred CCCchhhhcCCCCCCeeecCCCcCCC-CCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchh
Q 036011 434 SGPIPQCLASLISLRELNLGSNKFSS-SIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPIT 512 (977)
Q Consensus 434 ~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 512 (977)
++..|..+..+++|++|++++|++.+ .+|..|..+++|+.|++++|++++..|..|.++++|++|+|++|++++.+|..
T Consensus 437 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 516 (606)
T 3vq2_A 437 KIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSH 516 (606)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGG
T ss_pred CccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHH
Confidence 99999999999999999999999997 47999999999999999999999988999999999999999999999888999
Q ss_pred hhcccccceeccCCccccccccccccCcc-ccCeeeccCCccCCCCC
Q 036011 513 IGSLKDLVTLSLASNQFEGPIPQTFGSLT-GLESLDLSNNNLSGEIP 558 (977)
Q Consensus 513 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p 558 (977)
|+.+++|+.|+|++|+|+ .+|..+..++ +|+.|+|++|++.+..+
T Consensus 517 ~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 517 YNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred ccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 999999999999999999 6788899997 69999999999997554
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3e-54 Score=538.65 Aligned_cols=524 Identities=21% Similarity=0.216 Sum_probs=452.9
Q ss_pred EEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCC-CccccccccCcEEeccC
Q 036011 53 RALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSF-PSWIGVLSKLQILSLRN 131 (977)
Q Consensus 53 ~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~ 131 (977)
...|.++++++ .+|. ..++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 45677888998 7887 5689999999999999989999999999999999999777676 78999999999999999
Q ss_pred cCCCCCCCCcccCcCcccceeccccccccccCcc--ccCccccceeeeecccccccCC-ccccCCCCCceEEeeccCCCC
Q 036011 132 NSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSR--IGNLSSLVNVNLAYNNLQGEIP-SEIGNLQNLEILVLGMNNLSG 208 (977)
Q Consensus 132 n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~--~~~l~~L~~L~L~~n~i~~~~p-~~l~~l~~L~~L~l~~N~l~~ 208 (977)
|.+++..|..|.++++|++|+|++|.+.+.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|++++
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 9999999999999999999999999999877766 9999999999999999997655 579999999999999999999
Q ss_pred CCchhhccc--cceeEEEccCCcccccccCCCccccCCC------CceEEEecCceeeecCCcccccc---cccceEeec
Q 036011 209 PIQPSIFNI--STITLINLFGNQLSGHLDLPPKVSYSLP------NLRVFSLGKNKLTGTIPNSITNA---SKLTGLDLS 277 (977)
Q Consensus 209 ~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~l~------~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~Ls 277 (977)
..+..+..+ ++|+.|+|++|.+.+.. + ..+..++ +|++|++++|++++..+..+... .+++.|+++
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~--~-~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~ 239 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRV--S-VDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILA 239 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCC--C-CCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECC
T ss_pred eCHHHcccccCCccceEECCCCcccccc--c-cchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecc
Confidence 999999888 89999999999998532 2 2222233 49999999999998888777543 568888877
Q ss_pred ---------ccccccccccccccc--cccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCccccc
Q 036011 278 ---------FNSFSGLIPHTFGNL--RFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGN 346 (977)
Q Consensus 278 ---------~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 346 (977)
.|++....+..|.++ ++|+.|++++|.++.+.+.. +..+++|+.|++++|.+.+..|..+..
T Consensus 240 ~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~-------~~~l~~L~~L~L~~n~i~~~~~~~~~~ 312 (844)
T 3j0a_A 240 HHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRV-------FETLKDLKVLNLAYNKINKIADEAFYG 312 (844)
T ss_dssp SSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCC-------SSSCCCCCEEEEESCCCCEECTTTTTT
T ss_pred cccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhh-------hhcCCCCCEEECCCCcCCCCChHHhcC
Confidence 344554555666665 78999999999999876654 889999999999999999988888776
Q ss_pred ccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCcccccccccccccee
Q 036011 347 FSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGI 426 (977)
Q Consensus 347 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 426 (977)
+. +|+.|++++|++++..|..|..+++|++|++++|.+.+..+..|..+++|++|+|++|.+++ + ..+++|+.|
T Consensus 313 l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i----~~~~~L~~L 386 (844)
T 3j0a_A 313 LD-NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-I----HFIPSIPDI 386 (844)
T ss_dssp CS-SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-C----SSCCSCSEE
T ss_pred CC-CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-c----cCCCCcchh
Confidence 64 79999999999999999999999999999999999998888899999999999999999984 2 338899999
Q ss_pred eecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCC-ccccCcccCceEEccCCCCCCCCcc-ccccccccCeeeCcCCc
Q 036011 427 RLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIP-SSFWSLEYLLAVNLSSNSLSGSLPS-NIQNLQVLINLDLSRNQ 504 (977)
Q Consensus 427 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~ 504 (977)
++++|+++ .+|.. ..+++.|++++|++++... ..+.++++|+.|+|++|++++..+. .+..+++|+.|+|++|.
T Consensus 387 ~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~ 462 (844)
T 3j0a_A 387 FLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENM 462 (844)
T ss_dssp EEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCC
T ss_pred ccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCc
Confidence 99999998 45543 4679999999999996533 2356899999999999999965443 46678999999999999
Q ss_pred CC-----CCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccc
Q 036011 505 LS-----GDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEG 579 (977)
Q Consensus 505 l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 579 (977)
++ +..+..|..+++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|+|++|++++
T Consensus 463 l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~ 540 (844)
T 3j0a_A 463 LQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLA 540 (844)
T ss_dssp CSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCC
T ss_pred cccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCC
Confidence 97 44556789999999999999999999999999999999999999999977777666 899999999999999
Q ss_pred cCCCCCCCCcCCCCCcccCccccCC
Q 036011 580 EIPANGPFKYFAPQSFSWNYALCGP 604 (977)
Q Consensus 580 ~~p~~~~~~~~~~~~~~~n~~lcg~ 604 (977)
.+|.. +..+....+++|+..|..
T Consensus 541 ~~~~~--~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 541 PNPDV--FVSLSVLDITHNKFICEC 563 (844)
T ss_dssp CCSCC--CSSCCEEEEEEECCCCSS
T ss_pred CChhH--hCCcCEEEecCCCccccc
Confidence 99863 556666778899988843
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.5e-53 Score=504.12 Aligned_cols=498 Identities=19% Similarity=0.179 Sum_probs=402.7
Q ss_pred CCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCc
Q 036011 37 ICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPS 116 (977)
Q Consensus 37 ~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 116 (977)
.|.|.|+ |+ +++++++ .+|+.+. +.|++|+|++|++++..|.+|.++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~----------~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CD----------GRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EE----------CTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EE----------CCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999998 85 4556676 6787664 7889999999999887788899999999999999999877778
Q ss_pred cccccccCcEEeccCcCCCCCCCCcccCcCcccceecccccccc-ccCccccCccccceeeeecccccccCC-ccccCCC
Q 036011 117 WIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDG-NIPSRIGNLSSLVNVNLAYNNLQGEIP-SEIGNLQ 194 (977)
Q Consensus 117 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~-~~p~~~~~l~~L~~L~L~~n~i~~~~p-~~l~~l~ 194 (977)
.|+.+++|++|+|++|++++..|..|+++++|++|++++|.+++ ..|..++++++|++|++++|++.+.+| ..|++++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 88999999999999999987777778899999999999998886 467788889999999999988444554 5788899
Q ss_pred CCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecC--C-ccccccccc
Q 036011 195 NLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTI--P-NSITNASKL 271 (977)
Q Consensus 195 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--p-~~l~~l~~L 271 (977)
+|++|++++|++++..+..+..+++|+.|++++|.+. .++...+..+++|++|++++|++++.. | .....+++|
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L 225 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA---FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPM 225 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST---THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCC
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCccc---ccchhhHhhcccccEEEccCCccccccccccchhhhhhcc
Confidence 9999999999998888888888899999999988876 344444556888999999999888532 2 223456788
Q ss_pred ceEeecccccccccc----cccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccc
Q 036011 272 TGLDLSFNSFSGLIP----HTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNF 347 (977)
Q Consensus 272 ~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~ 347 (977)
++|++++|.+++..+ ..+..+++|+.+++++|.+.+...... .....+..+++|+.|++.++.+.....
T Consensus 226 ~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~-~~~~~~~~l~~L~~L~l~~~~i~~~~~------ 298 (549)
T 2z81_A 226 KKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNP-SESDVVSELGKVETVTIRRLHIPQFYL------ 298 (549)
T ss_dssp CEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCC-CTTTCCCCCTTCCEEEEESCBCSCGGG------
T ss_pred cceeccccccchhHHHHHHHHhhhhccccccccccccccccccccc-cchhhhhhhcccccccccccccchhhh------
Confidence 999999998876544 334567888899999988876532110 012235677888888888887553110
Q ss_pred cccccccccccCcccccCCccccccccccEEEeecCccCCCCChhh-hccCCCCEEEeecccccCcccc---cccccccc
Q 036011 348 SASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTV-GRLEQLQGLSLYGNNLEGSIPY---DLCHLERL 423 (977)
Q Consensus 348 ~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L 423 (977)
...++..+....+|+.|++++|.+. .+|..+ ..+++|++|+|++|++++.+|. .+..+++|
T Consensus 299 --------------~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L 363 (549)
T 2z81_A 299 --------------FYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSL 363 (549)
T ss_dssp --------------SCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTC
T ss_pred --------------cccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccC
Confidence 0122333455678999999999998 677665 6899999999999999987653 47889999
Q ss_pred ceeeecCCccCCCch--hhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCc
Q 036011 424 NGIRLNGNKLSGPIP--QCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLS 501 (977)
Q Consensus 424 ~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 501 (977)
+.|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|+.|++++|++++ +|..+. ++|++|+|+
T Consensus 364 ~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls 439 (549)
T 2z81_A 364 QTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVS 439 (549)
T ss_dssp CEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECC
T ss_pred cEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECC
Confidence 999999999986543 56899999999999999999 688889999999999999999984 444442 689999999
Q ss_pred CCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccC
Q 036011 502 RNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEI 581 (977)
Q Consensus 502 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 581 (977)
+|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|+.|||++|++++.+|..+..+++|+.|++++|+++|.+
T Consensus 440 ~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 440 NNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp SSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred CCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 99999643 57899999999999999 6776 578999999999999999988889999999999999999999988
Q ss_pred CC
Q 036011 582 PA 583 (977)
Q Consensus 582 p~ 583 (977)
|.
T Consensus 514 ~~ 515 (549)
T 2z81_A 514 PR 515 (549)
T ss_dssp HH
T ss_pred cc
Confidence 84
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-51 Score=495.72 Aligned_cols=507 Identities=21% Similarity=0.224 Sum_probs=325.0
Q ss_pred EEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCC
Q 036011 55 LNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSF 134 (977)
Q Consensus 55 L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 134 (977)
++.++.+++ .+|..+. +.+++|||++|++++..+.+|.++++|++|+|++|++++..|..|+.+++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 333444444 3444332 3455555555555554444555555555555555555544444455555555555555555
Q ss_pred CCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccc-cCCccccCCCCCceEEeeccCCCCCCchh
Q 036011 135 TGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQG-EIPSEIGNLQNLEILVLGMNNLSGPIQPS 213 (977)
Q Consensus 135 ~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-~~p~~l~~l~~L~~L~l~~N~l~~~~~~~ 213 (977)
++..|..|.++++|++|++++|.+++..+..|+++++|++|++++|.+++ .+|..|+++++|++|++++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG
T ss_pred CccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH
Confidence 54444555555555555555555554333345555555555555555553 23555555555555555555555444444
Q ss_pred hccccce----eEEEccCCcccccccCCCccccCCCCceEEEecCceeee-cCCcccccccccceEeeccccc------c
Q 036011 214 IFNISTI----TLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTG-TIPNSITNASKLTGLDLSFNSF------S 282 (977)
Q Consensus 214 l~~l~~L----~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l------~ 282 (977)
+..+.+| +.|++++|.+++ +++..+... +|+.|++++|.... .++..+..+.+++.+.+..+.+ .
T Consensus 169 ~~~l~~L~~~~~~L~l~~n~l~~---~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 244 (570)
T 2z63_A 169 LRVLHQMPLLNLSLDLSLNPMNF---IQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244 (570)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCE---ECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCE
T ss_pred ccchhccchhhhhcccCCCCcee---cCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhh
Confidence 5555544 455555555542 233333322 45555555543221 1222233333333333322211 1
Q ss_pred cccccccccccc--ccccccccc-ccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccC
Q 036011 283 GLIPHTFGNLRF--LSVLNLANN-YLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDC 359 (977)
Q Consensus 283 ~~~p~~~~~l~~--L~~L~L~~N-~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n 359 (977)
......+..+.+ ++.+++++| .+....+. .+..+++|++|++++|.+.+ +|..+... +|+.|++.+|
T Consensus 245 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-------~~~~l~~L~~L~l~~~~l~~-l~~~~~~~--~L~~L~l~~n 314 (570)
T 2z63_A 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIID-------LFNCLTNVSSFSLVSVTIER-VKDFSYNF--GWQHLELVNC 314 (570)
T ss_dssp ECCTTTTGGGGGSEEEEEEEEETTEEESCSTT-------TTGGGTTCSEEEEESCEECS-CCBCCSCC--CCSEEEEESC
T ss_pred hcchhhhccccccchhhhhhhcchhhhhhchh-------hhcCcCcccEEEecCccchh-hhhhhccC--CccEEeeccC
Confidence 111122222221 233333333 23222222 14444555555555555442 34444333 4555555555
Q ss_pred cccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCcc--ccccccccccceeeecCCccCCCc
Q 036011 360 KLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSI--PYDLCHLERLNGIRLNGNKLSGPI 437 (977)
Q Consensus 360 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~ 437 (977)
.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|.+++.. |..+..+++|+.|++++|++++..
T Consensus 315 ~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 389 (570)
T 2z63_A 315 KFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMS 389 (570)
T ss_dssp BCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEE
T ss_pred ccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccc
Confidence 555 4444 4678899999999998866655 78899999999999998654 678889999999999999998554
Q ss_pred hhhhcCCCCCCeeecCCCcCCCCCC-ccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCC-CCcchhhhc
Q 036011 438 PQCLASLISLRELNLGSNKFSSSIP-SSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLS-GDIPITIGS 515 (977)
Q Consensus 438 p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~ 515 (977)
+. +..+++|++|++++|++.+..| ..|.++++|+.|++++|.+++..|..|.++++|++|+|++|+++ +.+|..+..
T Consensus 390 ~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~ 468 (570)
T 2z63_A 390 SN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 468 (570)
T ss_dssp EE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred cc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhc
Confidence 44 8999999999999999997766 57889999999999999999889999999999999999999997 578999999
Q ss_pred ccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCCCC
Q 036011 516 LKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIPAN 584 (977)
Q Consensus 516 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 584 (977)
+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|+++|.+|..
T Consensus 469 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 999999999999999888999999999999999999999888888999999999999999999999864
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-51 Score=444.15 Aligned_cols=260 Identities=26% Similarity=0.426 Sum_probs=206.5
Q ss_pred cCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
+++.+.++||+|+||+||+|+++ ..||||+++... ....+.|.+|++++++++|||||+++|++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 56788899999999999999975 369999987442 3456789999999999999999999998865 568999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcc
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 840 (977)
|++|+|.++++.....+++..+..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+.........
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999877667999999999999999999999 7899999999999999999999999999998776544333
Q ss_pred eeeccccCCcccCccccC---CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 841 TQTMTIATIGYMAPEYGT---EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 841 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
.....+||+.|||||++. .++|+.++|||||||++|||+||+.||.+...... ....+...... +.+
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~~~~~-------p~~-- 259 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYAS-------PDL-- 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHTTCCC-------CCS--
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcCCCC-------CCc--
Confidence 444567999999999985 34699999999999999999999999976433221 11111111110 000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.....+++..+.+++.+||+.+|++||||+||+++|+.++.
T Consensus 260 ----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 260 ----SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp ----TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred ----ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 01112345568899999999999999999999999999874
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-50 Score=484.07 Aligned_cols=492 Identities=21% Similarity=0.193 Sum_probs=411.6
Q ss_pred CCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEe
Q 036011 49 HQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILS 128 (977)
Q Consensus 49 ~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 128 (977)
...++.|+|++|++++..+.+++++++|++|||++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 34699999999999977778899999999999999999998889999999999999999999977778999999999999
Q ss_pred ccCcCCCCCCCCcccCcCcccceecccccccc-ccCccccCccccceeeeecccccccCCccccCCCCC----ceEEeec
Q 036011 129 LRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDG-NIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNL----EILVLGM 203 (977)
Q Consensus 129 L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~-~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L----~~L~l~~ 203 (977)
|++|++++..+..++++++|++|++++|.+.+ .+|..|+++++|++|++++|++++..+..++.+++| +.|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 99999997766689999999999999999987 579999999999999999999998888889999999 8999999
Q ss_pred cCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceee------ecCCccccccc--ccceEe
Q 036011 204 NNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLT------GTIPNSITNAS--KLTGLD 275 (977)
Q Consensus 204 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~------~~~p~~l~~l~--~L~~L~ 275 (977)
|.+++..+..+... +|+.|++++|..... .+ +..+..+++++.+.+..+.+. ......+..+. .++.++
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~-~~-~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~ 263 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLN-VM-KTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFR 263 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTT-HH-HHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEE
T ss_pred CCceecCHHHhccC-cceeEeccccccccc-ch-hhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhh
Confidence 99998777776665 899999999854321 11 223345666666555433222 12222233333 245666
Q ss_pred eccc-ccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCccccccccccccc
Q 036011 276 LSFN-SFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNF 354 (977)
Q Consensus 276 Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L 354 (977)
+++| .+.+..|..|..+++|+.|++++|.++.++.. +..+ +|++|++++|.+.. +|.. ..++|+.|
T Consensus 264 l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~--------~~~~-~L~~L~l~~n~~~~-l~~~---~l~~L~~L 330 (570)
T 2z63_A 264 LAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF--------SYNF-GWQHLELVNCKFGQ-FPTL---KLKSLKRL 330 (570)
T ss_dssp EEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBC--------CSCC-CCSEEEEESCBCSS-CCBC---BCSSCCEE
T ss_pred hhcchhhhhhchhhhcCcCcccEEEecCccchhhhhh--------hccC-CccEEeeccCcccc-cCcc---cccccCEE
Confidence 7766 66666777777777777777777777765432 4555 77777777777763 3331 23467777
Q ss_pred ccccCcccccCCccccccccccEEEeecCccCCCC--ChhhhccCCCCEEEeecccccCccccccccccccceeeecCCc
Q 036011 355 YAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTI--PSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNK 432 (977)
Q Consensus 355 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 432 (977)
++.+|.+.+..+. ..+++|++|++++|.+++.. |..+..+++|++|++++|.+++..+ .+..+++|+.|++++|+
T Consensus 331 ~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~ 407 (570)
T 2z63_A 331 TFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSN 407 (570)
T ss_dssp EEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSE
T ss_pred eCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCc
Confidence 7777777766655 68899999999999998654 7889999999999999999995544 49999999999999999
Q ss_pred cCCCch-hhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCC-CCCccccccccccCeeeCcCCcCCCCcc
Q 036011 433 LSGPIP-QCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLS-GSLPSNIQNLQVLINLDLSRNQLSGDIP 510 (977)
Q Consensus 433 l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 510 (977)
+.+..| ..+..+++|++|++++|++.+..|..|.++++|+.|++++|.++ +.+|..|..+++|++|+|++|++++..|
T Consensus 408 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 487 (570)
T 2z63_A 408 LKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487 (570)
T ss_dssp EESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred cccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCCh
Confidence 997766 57899999999999999999999999999999999999999998 5789999999999999999999998889
Q ss_pred hhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCc
Q 036011 511 ITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPK 559 (977)
Q Consensus 511 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 559 (977)
..|+.+++|+.|+|++|++++.+|..|.++++|+.|+|++|++++..|.
T Consensus 488 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 488 TAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred hhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 9999999999999999999998888999999999999999999988764
No 17
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1e-51 Score=452.10 Aligned_cols=258 Identities=27% Similarity=0.400 Sum_probs=207.6
Q ss_pred cCCCcCccccCcceEEEEEEEeC------CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS------DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
++|.+.+.||+|+||+||+|+++ +++.||||+++.......++|.+|++++++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999864 478999999987766677889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCC--------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCce
Q 036011 757 VLELMPNGSLEKWLYSDN--------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVA 822 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 822 (977)
|||||++|+|.++++... ..++|.++..|+.|||+||+||| +++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997642 25899999999999999999999 7899999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHh
Q 036011 823 HVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKE 901 (977)
Q Consensus 823 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 901 (977)
||+|||+|+.....+........+||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+ ....+..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i~~ 275 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--AIDCITQ 275 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--HHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--HHHHHHc
Confidence 9999999997765444444445679999999999999999999999999999999999 899997643221 1111111
Q ss_pred hCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 902 SLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
... . +.+..++..+.+++.+||+.||++||||+||+++|+++..
T Consensus 276 g~~----------~-------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 276 GRE----------L-------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp TCC----------C-------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCC----------C-------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 000 0 0111345568899999999999999999999999999875
No 18
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.9e-52 Score=450.01 Aligned_cols=258 Identities=28% Similarity=0.430 Sum_probs=215.1
Q ss_pred cCCCcCccccCcceEEEEEEEeC------CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS------DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56778899999999999999863 478899999987766777889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCC------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEE
Q 036011 757 VLELMPNGSLEKWLYSDN------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHV 824 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 824 (977)
|||||++|+|.++++..+ ..++|..+..|+.|||+||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997643 35899999999999999999999 789999999999999999999999
Q ss_pred eecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhC
Q 036011 825 SDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESL 903 (977)
Q Consensus 825 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (977)
+|||+|+...............||+.|||||++.++.|+.++|||||||++|||+| |+.||.+....+ +...+...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i~~~- 246 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECITQG- 246 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHHT-
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHcC-
Confidence 99999987765443333344569999999999999999999999999999999999 899997653221 11111110
Q ss_pred CCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 904 PHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.... .+..++..+.+++.+||+.||++||||+||.+.|+++..
T Consensus 247 ----------~~~~------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 247 ----------RVLQ------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp ----------CCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----------CCCC------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0000 111345568999999999999999999999999998875
No 19
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.1e-50 Score=477.75 Aligned_cols=491 Identities=19% Similarity=0.189 Sum_probs=402.8
Q ss_pred CCCCCCCCCCcccceEecC--CCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCc
Q 036011 29 NNWSISQPICKWVGISCGA--RHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLD 106 (977)
Q Consensus 29 ~~w~~~~~~c~w~gv~c~~--~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 106 (977)
..|. +.+.|++.+++.-. ....+++|+|++|++++..|..++++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 4 C~~~-~~c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 4 CDAS-GVCDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp ECTT-SEEECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCC-ceEECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 4573 34335676666533 23579999999999998888899999999999999999999888999999999999999
Q ss_pred CccCCCCCCccccccccCcEEeccCcCCCC-CCCCcccCcCcccceeccccccccccC-ccccCccccceeeeecccccc
Q 036011 107 YNEFSGSFPSWIGVLSKLQILSLRNNSFTG-PIPNSLFNLSRLEKWDSMFNIIDGNIP-SRIGNLSSLVNVNLAYNNLQG 184 (977)
Q Consensus 107 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~n~i~~~~p-~~~~~l~~L~~L~L~~n~i~~ 184 (977)
+|++++..|..|+.+++|++|+|++|.+++ ..|..+.++++|++|++++|.+.+.+| ..|+++++|++|++++|++++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 999997777789999999999999999997 467889999999999999999555555 689999999999999999999
Q ss_pred cCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCc-
Q 036011 185 EIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPN- 263 (977)
Q Consensus 185 ~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~- 263 (977)
..|..++++++|+.|+++.|.+.......+..+++|+.|++++|++++....+......+++|+.|++++|++++..+.
T Consensus 163 ~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 242 (549)
T 2z81_A 163 YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNE 242 (549)
T ss_dssp ECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHH
T ss_pred cChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHH
Confidence 9999999999999999999998744333345689999999999999864322334455688999999999999865443
Q ss_pred ---ccccccccceEeeccccccccc------ccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCC
Q 036011 264 ---SITNASKLTGLDLSFNSFSGLI------PHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASN 334 (977)
Q Consensus 264 ---~l~~l~~L~~L~Ls~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N 334 (977)
.+..+++|+.|++++|.+.+.. ...+..+++|+.|.++++.+....... .....+...++|+.|++++|
T Consensus 243 l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~--~l~~~~~~~~~L~~L~l~~n 320 (549)
T 2z81_A 243 LLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFY--DLSTVYSLLEKVKRITVENS 320 (549)
T ss_dssp HHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSC--CCCHHHHHSTTCCEEEEESS
T ss_pred HHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcc--cchhhhhhcccceEEEeccC
Confidence 3467789999999999997642 234567889999999999876532100 00111233566777777777
Q ss_pred CCCCCCCcccccccccccccccccCcccccCCccc-cccccccEEEeecCccCCCCCh---hhhccCCCCEEEeeccccc
Q 036011 335 PLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEI-GNLRSLIVLSLFINALNGTIPS---TVGRLEQLQGLSLYGNNLE 410 (977)
Q Consensus 335 ~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~ 410 (977)
.+. .+|..+ ..+++|++|++++|.+++.+|. .++.+++|++|+|++|+++
T Consensus 321 ~l~--------------------------~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 374 (549)
T 2z81_A 321 KVF--------------------------LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR 374 (549)
T ss_dssp CCC--------------------------CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCC
T ss_pred ccc--------------------------cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCccc
Confidence 665 344444 4688899999999999876643 3788899999999999998
Q ss_pred Cccc--cccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccc
Q 036011 411 GSIP--YDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSN 488 (977)
Q Consensus 411 ~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 488 (977)
+..+ ..+..+++|++|++++|+++ .+|..+..+++|++|++++|++++ +|..+ .++|+.|++++|+|++..
T Consensus 375 ~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~--- 447 (549)
T 2z81_A 375 SMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS--- 447 (549)
T ss_dssp CHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC---
T ss_pred ccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc---
Confidence 6543 46888999999999999998 678888899999999999999984 44443 268999999999999743
Q ss_pred cccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCC
Q 036011 489 IQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIP 558 (977)
Q Consensus 489 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 558 (977)
..+++|++|+|++|+|+ .+|. .+.+++|+.|+|++|++++.+|..|..+++|+.|+|++|++++..|
T Consensus 448 -~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 448 -LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp -CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred -ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 57889999999999999 6776 5789999999999999999999999999999999999999998766
No 20
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.2e-51 Score=447.15 Aligned_cols=256 Identities=24% Similarity=0.375 Sum_probs=211.3
Q ss_pred CCCcCccccCcceEEEEEEEeC------CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 684 GFNECNLLGRGSFGSVYKGTFS------DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 684 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
++++.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4566789999999999999863 46889999997554 3345789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc
Q 036011 757 VLELMPNGSLEKWLYSDN---------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV 821 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~ 821 (977)
|||||++|+|.+++.... ..++|..+.+|+.|||+||+||| +++||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 999999999999996532 25899999999999999999999 789999999999999999999
Q ss_pred eEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHH
Q 036011 822 AHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVK 900 (977)
Q Consensus 822 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 900 (977)
+||+|||+|+.....+........+||+.|||||++.++.|+.++|||||||++|||+| |+.||.+.... .+...+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~i~ 261 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEMIR 261 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH
Confidence 99999999987765444334445679999999999999999999999999999999999 89999765322 1222211
Q ss_pred hhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 901 ESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
.. .. .+.+.+++..+.+++.+||+.||++||||+||+++|++..
T Consensus 262 ~~-----------~~------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 262 NR-----------QV------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp TT-----------CC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred cC-----------CC------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 10 00 0111235567899999999999999999999999998754
No 21
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=471.88 Aligned_cols=462 Identities=19% Similarity=0.222 Sum_probs=344.8
Q ss_pred EEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCc
Q 036011 53 RALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNN 132 (977)
Q Consensus 53 ~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 132 (977)
+.||+++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999998 6888776 89999999999999877788999999999999999999777889999999999999999
Q ss_pred CCCCCCCCcccCcCcccceecccccccc-ccCccccCccccceeeeecccccccCCccccCCCCC--ceEEeeccCC--C
Q 036011 133 SFTGPIPNSLFNLSRLEKWDSMFNIIDG-NIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNL--EILVLGMNNL--S 207 (977)
Q Consensus 133 ~l~~~~p~~l~~l~~L~~L~l~~n~i~~-~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L--~~L~l~~N~l--~ 207 (977)
+++ .+|.. .+++|++|++++|.+++ .+|..|+++++|++|++++|++++ ..+..+++| +.|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 56666 78899999999999987 578889999999999999999885 456777777 9999999988 7
Q ss_pred CCCchhhcccc-ceeEEEccCCcccccccCCCccccCCCCceEEEecCce-------eeecCCcccccccccceEeeccc
Q 036011 208 GPIQPSIFNIS-TITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNK-------LTGTIPNSITNASKLTGLDLSFN 279 (977)
Q Consensus 208 ~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~Ls~N 279 (977)
+..|..+..+. +...+++++|++.+ .++...+..+++|+.|++++|+ +.+.+| .+..+++|++|++++|
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~--~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~ 230 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFH--FILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNI 230 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCC--CCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchh--hhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccc
Confidence 77777776654 34455666666554 2344444555555555555554 443333 4455555555555555
Q ss_pred ccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccC
Q 036011 280 SFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDC 359 (977)
Q Consensus 280 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n 359 (977)
.+++..+..+. . ...+++|++|++++|.+.+.+|..+...
T Consensus 231 ~l~~~~~~~~~---------------------------~-~~~~~~L~~L~l~~n~l~~~~p~~~~~~------------ 270 (520)
T 2z7x_B 231 ETTWNSFIRIL---------------------------Q-LVWHTTVWYFSISNVKLQGQLDFRDFDY------------ 270 (520)
T ss_dssp EEEHHHHHHHH---------------------------H-HHHTSSCSEEEEEEEEEESCCCCCCCCC------------
T ss_pred ccCHHHHHHHH---------------------------H-HhhhCcccEEEeecccccCccccchhhc------------
Confidence 54432111100 0 0112355556665555554444322111
Q ss_pred cccccCCccccccccccEEEeecCccCCCCC-hhhhcc---CCCCEEEeecccccCccccccccccccceeeecCCccCC
Q 036011 360 KLTGNIPHEIGNLRSLIVLSLFINALNGTIP-STVGRL---EQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSG 435 (977)
Q Consensus 360 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 435 (977)
..+.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++
T Consensus 271 --------~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~ 338 (520)
T 2z7x_B 271 --------SGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTD 338 (520)
T ss_dssp --------CSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCT
T ss_pred --------ccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccCh
Confidence 016777888888888888 344 556555 67888888888876322 12678888888888888888
Q ss_pred CchhhhcCCCCCCeeecCCCcCCC--CCCccccCcccCceEEccCCCCCCCCcc-ccccccccCeeeCcCCcCCCCcchh
Q 036011 436 PIPQCLASLISLRELNLGSNKFSS--SIPSSFWSLEYLLAVNLSSNSLSGSLPS-NIQNLQVLINLDLSRNQLSGDIPIT 512 (977)
Q Consensus 436 ~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~ 512 (977)
.+|..+..+++|++|++++|++++ .+|..+..+++|+.|++++|++++.+|. .+..+++|++|++++|++++.+|..
T Consensus 339 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 418 (520)
T 2z7x_B 339 TVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC 418 (520)
T ss_dssp TTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGS
T ss_pred hhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhh
Confidence 788888888888888888888886 4557788888899999999988874554 4788889999999999998777766
Q ss_pred hhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcc-cccccccCccccCCCcccccCC
Q 036011 513 IGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKS-LEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 513 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p 582 (977)
+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|++|++++|+++|.++
T Consensus 419 l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 419 LP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 54 78999999999998 67887789999999999999998 56665 8889999999999999988765
No 22
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.1e-50 Score=485.69 Aligned_cols=484 Identities=19% Similarity=0.225 Sum_probs=320.8
Q ss_pred hHHHHHHHHHHHHhccCCCCCccCCCCCCCCC----CcccceE-ecCC--CCcEEEEEcCCCCCCccCCccccCcccccE
Q 036011 6 LTTDQFALLAFKAHVTDPQSVLANNWSISQPI----CKWVGIS-CGAR--HQRVRALNLSNMGLRGTIPPHLGNFSFLMS 78 (977)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~----c~w~gv~-c~~~--~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~ 78 (977)
..++.+.-.|+++-+..-.+ .+|....+. |.|..-+ |..= ...|++ +. -.+++.
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~---~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C---~~-------------~~~V~~ 85 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNG---KNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL---NS-------------NGRVTG 85 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTG---GGCCCCC------CCCCCSSCGGGTTCCTTEEE---CT-------------TCCEEE
T ss_pred hhhHHHHHHHHHHHHHHcCC---CCcccCCcCCccCCCCCCCCCcccccCCCCeEE---cC-------------CCCEEE
Confidence 34555666777766644332 479754422 3785322 2111 022443 10 046889
Q ss_pred eeccCCcccccCCCCcCCCCCCCEEeCcCccC------CC------CCCccccccccCcEEeccCcCCCCCCCCcccCc-
Q 036011 79 LDISKNNFHAYLPNELGQLRRLRFISLDYNEF------SG------SFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNL- 145 (977)
Q Consensus 79 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l- 145 (977)
|+|++|+++|.+|.+|++|++|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.+|..+..+
T Consensus 86 L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~ 162 (636)
T 4eco_A 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLI 162 (636)
T ss_dssp EECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHH
T ss_pred EEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHH
Confidence 99999999999999999999999999999976 33 455544 67788 9999999998888777632
Q ss_pred Ccccceecc--------------------ccccccccCccccCccccceeeeeccccccc-----------------CCc
Q 036011 146 SRLEKWDSM--------------------FNIIDGNIPSRIGNLSSLVNVNLAYNNLQGE-----------------IPS 188 (977)
Q Consensus 146 ~~L~~L~l~--------------------~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~-----------------~p~ 188 (977)
..+..+++. .|.+++ +|..|+++++|++|+|++|++++. +|.
T Consensus 163 ~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~ 241 (636)
T 4eco_A 163 KDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE 241 (636)
T ss_dssp HHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS
T ss_pred HHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCch
Confidence 223333332 467776 777777777777777777777764 777
Q ss_pred ccc--CCCCCceEEeeccCCCCCCchhhccccceeEEEccCCc-ccc-cccCCCccccC------CCCceEEEecCceee
Q 036011 189 EIG--NLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQ-LSG-HLDLPPKVSYS------LPNLRVFSLGKNKLT 258 (977)
Q Consensus 189 ~l~--~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~-~~~~~~~~~~~------l~~L~~L~L~~N~l~ 258 (977)
.++ ++++|++|+|++|++.+.+|..+.++++|+.|+|++|+ +++ . +|.. +.. +++|++|+|++|+++
T Consensus 242 ~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~--lp~~-~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 242 DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQ--LKDD-WQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHH--HHHH-HHHHHHSGGGGTCCEEECCSSCCS
T ss_pred hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCcccc--chHH-HHhhhccccCCCCCEEECCCCcCC
Confidence 777 77777777777777777777667666666666666665 543 1 1211 112 255666666666665
Q ss_pred ecCCc--ccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCC
Q 036011 259 GTIPN--SITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPL 336 (977)
Q Consensus 259 ~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 336 (977)
.+|. .+..+++|++|+|++|++++.+| .|..+++|++|++++|+++.+
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~l---------------------------- 368 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEI---------------------------- 368 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEEC----------------------------
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccc----------------------------
Confidence 5555 55566666666666666655555 555555555555555555432
Q ss_pred CCCCCcccccccccccccccccCcccccCCcccccccc-ccEEEeecCccCCCCChhhhccC--CCCEEEeecccccCcc
Q 036011 337 RGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRS-LIVLSLFINALNGTIPSTVGRLE--QLQGLSLYGNNLEGSI 413 (977)
Q Consensus 337 ~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~ 413 (977)
|..+..+++ |++|++++|.++ .+|..+..++ +|++|++++|.+++.+
T Consensus 369 -----------------------------p~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~ 418 (636)
T 4eco_A 369 -----------------------------PANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVD 418 (636)
T ss_dssp -----------------------------CTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTT
T ss_pred -----------------------------cHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcc
Confidence 333444444 555555555555 4444444433 5666666666666666
Q ss_pred ccccc-------cccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCc-------ccCceEEccCC
Q 036011 414 PYDLC-------HLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSL-------EYLLAVNLSSN 479 (977)
Q Consensus 414 p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-------~~L~~L~L~~N 479 (977)
|..+. .+++|+.|++++|+++...+..+..+++|++|+|++|+++...+..+... ++|+.|+|++|
T Consensus 419 p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N 498 (636)
T 4eco_A 419 GKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFN 498 (636)
T ss_dssp TCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSS
T ss_pred hhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCC
Confidence 66555 56667777777777764444445567777777777777773333333322 27777888888
Q ss_pred CCCCCCccccc--cccccCeeeCcCCcCCCCcchhhhcccccceecc------CCccccccccccccCccccCeeeccCC
Q 036011 480 SLSGSLPSNIQ--NLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSL------ASNQFEGPIPQTFGSLTGLESLDLSNN 551 (977)
Q Consensus 480 ~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N 551 (977)
+|+ .+|..+. .+++|++|+|++|++++ +|..++.+++|+.|+| ++|++.+.+|..++++++|+.|+|++|
T Consensus 499 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 576 (636)
T 4eco_A 499 KLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSN 576 (636)
T ss_dssp CCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSS
T ss_pred cCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCC
Confidence 777 5666665 77788888888888875 7777777888888877 678899999999999999999999999
Q ss_pred ccCCCCCcccccccccCccccCCCccccc
Q 036011 552 NLSGEIPKSLEALLFLKQLNVSHNKLEGE 580 (977)
Q Consensus 552 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 580 (977)
+| +.+|..+. ++|+.|++++|++...
T Consensus 577 ~l-~~ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 577 DI-RKVNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp CC-CBCCSCCC--TTCCEEECCSCTTCEE
T ss_pred cC-CccCHhHh--CcCCEEECcCCCCccc
Confidence 99 58898876 8999999999998753
No 23
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.9e-50 Score=436.09 Aligned_cols=250 Identities=22% Similarity=0.304 Sum_probs=210.3
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
+.|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|++++++++|||||++++++.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46889999999999999999975 69999999998776666677899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcce
Q 036011 762 PNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVT 841 (977)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 841 (977)
+||+|.+++.... +++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~~--l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 9999999997644 899999999999999999999 78999999999999999999999999999998754322 2
Q ss_pred eeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccC
Q 036011 842 QTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHT 921 (977)
Q Consensus 842 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (977)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ ....+....+.. +
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~~~~~~--------~------ 290 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRDNLPPR--------L------ 290 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSSCCC--------C------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHcCCCCC--------C------
Confidence 334679999999999999999999999999999999999999997642211 111111111111 0
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 922 SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 922 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.....+...+.+++.+||+.||++|||++|++++
T Consensus 291 -~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 -KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111234457899999999999999999999875
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.5e-48 Score=469.02 Aligned_cols=504 Identities=21% Similarity=0.189 Sum_probs=339.2
Q ss_pred EcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCC
Q 036011 56 NLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFT 135 (977)
Q Consensus 56 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 135 (977)
+.++.+++ .+|+.+- +.+++|||++|+|+++.|.+|.++++|++|+|++|+|++..|++|++|++|++|+|++|+++
T Consensus 37 ~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 37 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 44555555 4554431 34555666666655544555555666666666666555444445555556666666666555
Q ss_pred CCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccc-cCCccccCCCCCceEEeeccCCCCCCchhh
Q 036011 136 GPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQG-EIPSEIGNLQNLEILVLGMNNLSGPIQPSI 214 (977)
Q Consensus 136 ~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l 214 (977)
+..+..|.++++|++|++++|.|++..+..|+++++|++|+|++|++++ .+|..++++++|++|++++|++++..+..+
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 4444455555566666666665555444455555566666666655543 234555555556666666665555555554
Q ss_pred cccccee----EEEccCCcccccccCCCccccCCCCceEEEecCceee-------------------------------e
Q 036011 215 FNISTIT----LINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLT-------------------------------G 259 (977)
Q Consensus 215 ~~l~~L~----~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------------~ 259 (977)
..+.+++ .++++.|.+.. +++..+ ....++.+++++|... .
T Consensus 194 ~~L~~l~~~~~~~~ls~n~l~~---i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~ 269 (635)
T 4g8a_A 194 RVLHQMPLLNLSLDLSLNPMNF---IQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 269 (635)
T ss_dssp HHHHTCTTCCCEEECTTCCCCE---ECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSC
T ss_pred cchhhhhhhhhhhhcccCcccc---cCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccc
Confidence 4443322 45555555542 222222 2223444444444332 1
Q ss_pred cCCcccccccccceEeeccccccc---ccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCC
Q 036011 260 TIPNSITNASKLTGLDLSFNSFSG---LIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPL 336 (977)
Q Consensus 260 ~~p~~l~~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 336 (977)
.....+.....+...++..+.... ..+..+..+.+++.+.+.+|.+..+. .+.....|+.|++.+|.+
T Consensus 270 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~---------~~~~~~~L~~L~l~~~~~ 340 (635)
T 4g8a_A 270 FDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK---------DFSYNFGWQHLELVNCKF 340 (635)
T ss_dssp CCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG---------GGGSCCCCSEEEEESCEE
T ss_pred ccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc---------ccccchhhhhhhcccccc
Confidence 122233334444444444433221 12334555666777777777665533 255667788888888887
Q ss_pred CCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCC--CCChhhhccCCCCEEEeecccccCccc
Q 036011 337 RGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNG--TIPSTVGRLEQLQGLSLYGNNLEGSIP 414 (977)
Q Consensus 337 ~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p 414 (977)
.+..+..+ ..++.+.+.+|..... .....+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+
T Consensus 341 ~~~~~~~l----~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~ 413 (635)
T 4g8a_A 341 GQFPTLKL----KSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMS 413 (635)
T ss_dssp SSCCCCBC----TTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EEC
T ss_pred cCcCcccc----hhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-ccc
Confidence 76544332 3566777777776543 334578899999999998853 45677888899999999999887 466
Q ss_pred cccccccccceeeecCCccCCCch-hhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCC-CCCCccccccc
Q 036011 415 YDLCHLERLNGIRLNGNKLSGPIP-QCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSL-SGSLPSNIQNL 492 (977)
Q Consensus 415 ~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l 492 (977)
..+..+++|+.++++.|+.....+ ..+..+++++.+++++|++.+..+..+..++.|+.|++++|++ .+..|..|..+
T Consensus 414 ~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l 493 (635)
T 4g8a_A 414 SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL 493 (635)
T ss_dssp SCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred ccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhc
Confidence 678889999999999888765444 5678889999999999999988899999999999999999974 44578889999
Q ss_pred cccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccc-cccCccc
Q 036011 493 QVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEAL-LFLKQLN 571 (977)
Q Consensus 493 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ 571 (977)
++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..|..|.++++|++|||++|+|++..|..|..+ ++|++|+
T Consensus 494 ~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~ 573 (635)
T 4g8a_A 494 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 573 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEE
T ss_pred cccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEE
Confidence 999999999999998888899999999999999999998888899999999999999999998889999888 6899999
Q ss_pred cCCCcccccCC
Q 036011 572 VSHNKLEGEIP 582 (977)
Q Consensus 572 l~~N~l~~~~p 582 (977)
|++|+|++...
T Consensus 574 L~~Np~~C~C~ 584 (635)
T 4g8a_A 574 LTQNDFACTCE 584 (635)
T ss_dssp CTTCCBCCSGG
T ss_pred eeCCCCcccCC
Confidence 99999988764
No 25
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.9e-49 Score=433.40 Aligned_cols=251 Identities=22% Similarity=0.340 Sum_probs=203.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++++.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999999965 69999999997653 345677999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 759 ELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+||+|.+++...+ ..+++..+..|+.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 9999999999997654 35789999999999999999999 7999999999999999999999999999998764321
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+ .+.......++.
T Consensus 180 --~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~~------------ 244 (350)
T 4b9d_A 180 --ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-LVLKIISGSFPP------------ 244 (350)
T ss_dssp --HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCC------------
T ss_pred --ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCCC------------
Confidence 12234579999999999999999999999999999999999999997642221 111211111110
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. ...++..+.+++.+||+.||++|||++|++++
T Consensus 245 ~------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 245 V------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp C------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 01123457899999999999999999999864
No 26
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.6e-49 Score=426.61 Aligned_cols=249 Identities=23% Similarity=0.329 Sum_probs=209.1
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999965 79999999998653 334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||++||+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998654 4999999999999999999999 79999999999999999999999999999998765444
Q ss_pred cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ .........+. ..
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~~------------~p 254 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKLEYD------------FP 254 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC------------CC
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCC------------CC
Confidence 334455689999999999999999999999999999999999999997632211 11111111110 00
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
. .+...+.+++.+|++.||++|||++|+..
T Consensus 255 ~-------~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 255 E-------KFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp T-------TCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred c-------ccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 0 12335688999999999999999998743
No 27
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2e-49 Score=431.18 Aligned_cols=252 Identities=22% Similarity=0.270 Sum_probs=205.2
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
+.|++.++||+|+||+||+|++. +|+.||||+++.+. ...+|++++++++|||||++++++.+++..|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45778889999999999999975 69999999997542 2357999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC-ceEEeecccccccCCCCCcc
Q 036011 762 PNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM-VAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfgla~~~~~~~~~~ 840 (977)
+||+|.++++..+ .+++..+..++.||+.||+||| +++||||||||+|||++.++ .+||+|||+|+.+.......
T Consensus 133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999998654 4999999999999999999999 89999999999999999988 69999999999876433221
Q ss_pred ---eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 841 ---TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 841 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
.....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+. .........+ ..
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~~~--~~--------- 276 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEPPP--IR--------- 276 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSCCG--GG---------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCCCC--ch---------
Confidence 22335799999999999999999999999999999999999999976543332 2221111100 00
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHch
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKI 960 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~ 960 (977)
..+.+++..+.+++.+||+.||++|||+.|+++++.+.
T Consensus 277 -----~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 277 -----EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp -----GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 00112345678999999999999999999999988554
No 28
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-49 Score=431.56 Aligned_cols=268 Identities=21% Similarity=0.310 Sum_probs=204.8
Q ss_pred cCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC----eeEEEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND----FRALVL 758 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 758 (977)
++|.+.+.||+|+||+||+|++ +|+.||||++...... ...++.|+..+.+++|||||++++++.+++ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4577788999999999999998 5899999999754322 233456777778899999999999997654 578999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHG-----HSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
|||++|+|.++++... ++|..+.+++.|+++||+|||+. ++.+||||||||+|||++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999998754 89999999999999999999943 2449999999999999999999999999999887
Q ss_pred CCCCCcc--eeeccccCCcccCccccCCC------CcCcccchhhHhHHHHHHhcCCCCCCcCCcccc----------cH
Q 036011 834 DEGDDSV--TQTMTIATIGYMAPEYGTEG------IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM----------SL 895 (977)
Q Consensus 834 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg~~p~~~~~~~~~----------~~ 895 (977)
....... .....+||++|||||++.+. .|+.++|||||||++|||+||+.||......+. ..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 6543322 22335799999999998754 478899999999999999999887754322221 11
Q ss_pred HHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 896 KKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
........... .++.+ .......+++..+.+++.+||+.||++||||.||++.|+++..
T Consensus 239 ~~~~~~~~~~~----~rp~~----p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 239 EEMRKVVCEQK----LRPNI----PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHHHHTTSC----CCCCC----CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccc----CCCCC----CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 12111111111 11111 1111223466778999999999999999999999999998874
No 29
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.8e-48 Score=415.43 Aligned_cols=245 Identities=24% Similarity=0.362 Sum_probs=195.9
Q ss_pred CcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeec----CCeeEEEE
Q 036011 686 NECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN----NDFRALVL 758 (977)
Q Consensus 686 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 758 (977)
...+.||+|+||+||+|++. +++.||||++.... ....+.|.+|++++++++|||||+++++|.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999975 68999999997543 3445779999999999999999999999865 34678999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCceeeC-CCCceEEeecccccccCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTP--VVHCDLKPSNILLD-EDMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~-~~~~~kl~Dfgla~~~~~ 835 (977)
|||++|+|.+++.... .+++..+..++.||+.||+||| +++ ||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998654 4899999999999999999999 666 99999999999998 479999999999986433
Q ss_pred CCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 836 GDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 836 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
. .....+||+.|||||++.+ .|+.++||||+||++|||+||+.||.+...... +...+..... +
T Consensus 185 ~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-~~~~i~~~~~--------~-- 248 (290)
T 3fpq_A 185 S----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYRRVTSGVK--------P-- 248 (290)
T ss_dssp T----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHHHHTTTCC--------C--
T ss_pred C----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-HHHHHHcCCC--------C--
Confidence 2 2234579999999999865 699999999999999999999999975322211 1111111000 0
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
...+..++..+.+++.+||+.||++|||++|++++
T Consensus 249 ------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 249 ------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00011123357889999999999999999999764
No 30
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=437.15 Aligned_cols=250 Identities=22% Similarity=0.302 Sum_probs=210.3
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
+.|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+.+..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999975 69999999998776666677999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcce
Q 036011 762 PNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVT 841 (977)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 841 (977)
+||+|.++++... +++..+..++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+..... .
T Consensus 231 ~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 303 (423)
T 4fie_A 231 EGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 303 (423)
T ss_dssp TTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--C
T ss_pred CCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--c
Confidence 9999999997654 899999999999999999999 78999999999999999999999999999998754332 2
Q ss_pred eeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccC
Q 036011 842 QTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHT 921 (977)
Q Consensus 842 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (977)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ ....+....+.. +..
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~~~~~~--------~~~---- 369 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRDNLPPR--------LKN---- 369 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCC--------CSC----
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHcCCCCC--------Ccc----
Confidence 334679999999999999999999999999999999999999997642211 111111111110 000
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 922 SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 922 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
...+...+.+++.+||+.||++|||+.|++++
T Consensus 370 ---~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 ---LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp ---TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11123457889999999999999999999875
No 31
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-48 Score=431.34 Aligned_cols=262 Identities=27% Similarity=0.392 Sum_probs=214.5
Q ss_pred HhhcCCCcCccccCcceEEEEEEEeCC------CCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCC-CCcceEeeeeecC
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTFSD------GTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRH-RNLIKIFSSCCNN 751 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~ 751 (977)
...++|++.+.||+|+||+||+|++.. ++.||||++.... ....+.|.+|++++++++| ||||+++|+|.+.
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 345789999999999999999998642 4689999997654 3445779999999999965 9999999998764
Q ss_pred -CeeEEEEeccCCCCHHHHhhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCcee
Q 036011 752 -DFRALVLELMPNGSLEKWLYSDN---------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNIL 815 (977)
Q Consensus 752 -~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIl 815 (977)
+..++|||||++|+|.++++... ..+++..+..++.|||+||+||| +++||||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCcccee
Confidence 56899999999999999997532 24899999999999999999999 789999999999999
Q ss_pred eCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCccccc
Q 036011 816 LDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMS 894 (977)
Q Consensus 816 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~ 894 (977)
+++++.+||+|||+|+.+............+||+.|||||++.++.|+.++|||||||++|||+| |+.||.+....+.
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~- 296 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 296 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-
Confidence 99999999999999998766554444555679999999999999999999999999999999998 8999977543322
Q ss_pred HHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 895 LKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
+...+...... . .+..++..+.+++.+||+.||++|||++|++++|+++-.
T Consensus 297 ~~~~i~~g~~~-----------~------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 297 FCRRLKEGTRM-----------R------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp HHHHHHHTCCC-----------C------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC-----------C------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 22211111100 0 011234568899999999999999999999999988753
No 32
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.9e-48 Score=408.55 Aligned_cols=246 Identities=26% Similarity=0.380 Sum_probs=191.0
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
++|++.+.||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999964 79999999997553 233567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||+ +|+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 689999997765 4999999999999999999999 7999999999999999999999999999998765432
Q ss_pred cceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
.....+||+.|||||++.+..| +.++||||+||++|||+||+.||.+....+ ..........+ .
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~-~~~~i~~~~~~------------~ 231 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYT------------L 231 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC------------C
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCC------------C
Confidence 2234579999999999998876 579999999999999999999997632211 11111111000 0
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. ..+...+.+++.+|++.||++|||++|++++
T Consensus 232 p-------~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 232 P-------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp C-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred C-------CCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0 0123456889999999999999999999764
No 33
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-47 Score=467.40 Aligned_cols=442 Identities=19% Similarity=0.212 Sum_probs=292.2
Q ss_pred ccccEeeccCCcccccCCCCcCCCCCCCEEeC-cCccCCCCCCcccccc----c-----cCcE------Eec-cCcC---
Q 036011 74 SFLMSLDISKNNFHAYLPNELGQLRRLRFISL-DYNEFSGSFPSWIGVL----S-----KLQI------LSL-RNNS--- 133 (977)
Q Consensus 74 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-~~n~l~~~~p~~~~~l----~-----~L~~------L~L-~~n~--- 133 (977)
.+++.|+|++|++.|.+|.+|++|++|++|+| ++|.++|..|-..... + .++. ++. ....
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 56899999999999999999999999999999 8998887644321111 0 0000 000 0000
Q ss_pred --------CCCCCCCcccCcCcccceeccc--cccccccCccccCccccceeeeecccccc-----------------cC
Q 036011 134 --------FTGPIPNSLFNLSRLEKWDSMF--NIIDGNIPSRIGNLSSLVNVNLAYNNLQG-----------------EI 186 (977)
Q Consensus 134 --------l~~~~p~~l~~l~~L~~L~l~~--n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-----------------~~ 186 (977)
.....+........++.+.+.. |.+++ +|..|+++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0001122223444566666655 89998 89999999999999999999998 38
Q ss_pred Ccccc--CCCCCceEEeeccCCCCCCchhhccccceeEEEccCCc-ccc-cccCCCc------cccCCCCceEEEecCce
Q 036011 187 PSEIG--NLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQ-LSG-HLDLPPK------VSYSLPNLRVFSLGKNK 256 (977)
Q Consensus 187 p~~l~--~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~-~~~~~~~------~~~~l~~L~~L~L~~N~ 256 (977)
|..++ ++++|++|+|++|++.+.+|..+.++++|+.|+|++|+ +++ . +|.. .+..+++|++|+|++|+
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~--iP~~i~~L~~~~~~l~~L~~L~Ls~N~ 559 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQ--LKADWTRLADDEDTGPKIQIFYMGYNN 559 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHH--HHHHHHHHHHCTTTTTTCCEEECCSSC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCccccc--chHHHHhhhhcccccCCccEEEeeCCc
Confidence 99988 99999999999999999999999999999999998887 764 1 2221 22345577777777777
Q ss_pred eeecCCc--ccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCC-CceEEecC
Q 036011 257 LTGTIPN--SITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRN-LTTLAVAS 333 (977)
Q Consensus 257 l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~-L~~L~L~~ 333 (977)
++ .+|. .+.++++|++|+|++|+++ .+| .|+.+++|+.|+|++|+++.++.. +..+++ |+.|++++
T Consensus 560 L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~~--------l~~l~~~L~~L~Ls~ 628 (876)
T 4ecn_A 560 LE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPED--------FCAFTDQVEGLGFSH 628 (876)
T ss_dssp CC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCCTT--------SCEECTTCCEEECCS
T ss_pred CC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccchHH--------HhhccccCCEEECcC
Confidence 77 6676 6777777777777777777 445 677777777777777776643321 445555 55555555
Q ss_pred CCCCCCCCcccccccccccccccccCcccccCCcccccc--ccccEEEeecCccCCCCChhhhccCCCCEEEeecccccC
Q 036011 334 NPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNL--RSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEG 411 (977)
Q Consensus 334 N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 411 (977)
|.+. .+| ..+..+ ++|+.|+|++|.+.+.+|...
T Consensus 629 N~L~-~lp-------------------------~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~------------------ 664 (876)
T 4ecn_A 629 NKLK-YIP-------------------------NIFNAKSVYVMGSVDFSYNKIGSEGRNIS------------------ 664 (876)
T ss_dssp SCCC-SCC-------------------------SCCCTTCSSCEEEEECCSSCTTTTSSSCS------------------
T ss_pred CCCC-cCc-------------------------hhhhccccCCCCEEECcCCcCCCccccch------------------
Confidence 5554 222 222222 225555555555544333211
Q ss_pred ccccccc--cccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccC--------cccCceEEccCCCC
Q 036011 412 SIPYDLC--HLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWS--------LEYLLAVNLSSNSL 481 (977)
Q Consensus 412 ~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--------l~~L~~L~L~~N~l 481 (977)
..+. .+++|+.|+|++|+++...+..+..+++|+.|+|++|+|+ .+|..+.. +++|+.|+|++|+|
T Consensus 665 ---~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L 740 (876)
T 4ecn_A 665 ---CSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKL 740 (876)
T ss_dssp ---SCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCC
T ss_pred ---hhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCC
Confidence 0111 2235555555555555322223335555666666666555 33332221 22666666666666
Q ss_pred CCCCccccc--cccccCeeeCcCCcCCCCcchhhhcccccceeccC------CccccccccccccCccccCeeeccCCcc
Q 036011 482 SGSLPSNIQ--NLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLA------SNQFEGPIPQTFGSLTGLESLDLSNNNL 553 (977)
Q Consensus 482 ~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls------~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 553 (977)
+ .+|..+. .+++|+.|+|++|++++ +|..++.+++|+.|+|+ +|++.+.+|..|.++++|+.|+|++|+|
T Consensus 741 ~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 741 T-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp C-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred c-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 6 4555554 66666666666666664 56666666666666665 4889999999999999999999999999
Q ss_pred CCCCCcccccccccCccccCCCcccccCC
Q 036011 554 SGEIPKSLEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 554 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 582 (977)
+.+|..+. ++|+.|||++|++...-+
T Consensus 819 -~~Ip~~l~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 819 -RKVDEKLT--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp -CBCCSCCC--SSSCEEECCSCTTCEEEC
T ss_pred -CccCHhhc--CCCCEEECCCCCCCccCh
Confidence 68998876 699999999999875443
No 34
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.4e-46 Score=447.12 Aligned_cols=468 Identities=17% Similarity=0.187 Sum_probs=343.2
Q ss_pred EEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCc
Q 036011 53 RALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNN 132 (977)
Q Consensus 53 ~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 132 (977)
+.+|+++++++ .+|..+. ++|++|+|++|++++..|.+|.++++|++|+|++|++++..|+.|+.+++|++|+|++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 78999999999 5998764 89999999999999988889999999999999999999878999999999999999999
Q ss_pred CCCCCCCCcccCcCcccceecccccccc-ccCccccCccccceeeeecccccccCCccccCCCCC--ceEEeeccCC--C
Q 036011 133 SFTGPIPNSLFNLSRLEKWDSMFNIIDG-NIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNL--EILVLGMNNL--S 207 (977)
Q Consensus 133 ~l~~~~p~~l~~l~~L~~L~l~~n~i~~-~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L--~~L~l~~N~l--~ 207 (977)
+++ .+|.. .+++|++|++++|.+++ .+|..|+++++|++|+|++|++++. .+..+++| +.|++++|++ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 999 67766 89999999999999986 4578999999999999999999853 45555555 9999999999 7
Q ss_pred CCCchhhcccc-ceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccc
Q 036011 208 GPIQPSIFNIS-TITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIP 286 (977)
Q Consensus 208 ~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 286 (977)
+..+..+..+. ....+++++|.+.+ .++...+..+++|+.|++++|+.... .+.+. .
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~--~~~~~~~~~l~~L~~L~l~~n~~~~~-------------------~l~~~-~ 242 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFS--VQVNMSVNALGHLQLSNIKLNDENCQ-------------------RLMTF-L 242 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCC--CCCEEEESSEEEEEEEEEECCSTTHH-------------------HHHHH-H
T ss_pred ccCcccccccCcceEEEEecCccchh--hhhhhcccccceEEEecccccccccc-------------------hHHHH-H
Confidence 77777777654 12244666666553 23333344455555555555431000 01111 1
Q ss_pred cccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCC
Q 036011 287 HTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIP 366 (977)
Q Consensus 287 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p 366 (977)
..|..+++|+.|+++++.++..... .... ....++|++|++++|.+.+.+|..+...
T Consensus 243 ~~l~~l~~L~~L~L~~~~l~~~~~~---~~~~-~~~~~~L~~L~l~~n~l~~~ip~~~~~~------------------- 299 (562)
T 3a79_B 243 SELTRGPTLLNVTLQHIETTWKCSV---KLFQ-FFWPRPVEYLNIYNLTITERIDREEFTY------------------- 299 (562)
T ss_dssp HHHHSCSSCEEEEEEEEEECHHHHH---HHHH-HHTTSSEEEEEEEEEEECSCCCCCCCCC-------------------
T ss_pred HHHhccCcceEEEecCCcCcHHHHH---HHHH-hhhcccccEEEEeccEeeccccchhhhc-------------------
Confidence 2234444444444444443321100 0000 1112355666666665554444332111
Q ss_pred ccccccccccEEEeecCccCCCCC-hhhhcc---CCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhc
Q 036011 367 HEIGNLRSLIVLSLFINALNGTIP-STVGRL---EQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLA 442 (977)
Q Consensus 367 ~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 442 (977)
....++.|+.+++..|.+ .+| ..+..+ .+|++|++++|.+.... ....+++|++|++++|++++.+|..+.
T Consensus 300 -~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~ 374 (562)
T 3a79_B 300 -SETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCS 374 (562)
T ss_dssp -CSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCC
T ss_pred -ccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhc
Confidence 015666777777777777 344 333333 67889999998886322 126788899999999999888888889
Q ss_pred CCCCCCeeecCCCcCCCCC--CccccCcccCceEEccCCCCCCCCc-cccccccccCeeeCcCCcCCCCcchhhhccccc
Q 036011 443 SLISLRELNLGSNKFSSSI--PSSFWSLEYLLAVNLSSNSLSGSLP-SNIQNLQVLINLDLSRNQLSGDIPITIGSLKDL 519 (977)
Q Consensus 443 ~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 519 (977)
.+++|++|+|++|++++.. |..|.++++|+.|++++|++++.+| ..+..+++|++|+|++|++++.+|..+. ++|
T Consensus 375 ~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L 452 (562)
T 3a79_B 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKV 452 (562)
T ss_dssp SCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTC
T ss_pred ccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcC
Confidence 9999999999999998633 4678889999999999999987444 4588889999999999999877666554 689
Q ss_pred ceeccCCccccccccccccCccccCeeeccCCccCCCCCcc-cccccccCccccCCCcccccCCC
Q 036011 520 VTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKS-LEALLFLKQLNVSHNKLEGEIPA 583 (977)
Q Consensus 520 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~ 583 (977)
+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|+.|++++|+++|.+|-
T Consensus 453 ~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 453 KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp SEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 99999999998 67777779999999999999999 56665 88999999999999999988763
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.7e-48 Score=414.33 Aligned_cols=242 Identities=27% Similarity=0.312 Sum_probs=193.2
Q ss_pred cCCCcCccccCcceEEEEEEEeC----CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS----DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
++|++.+.||+|+||+||+|+.. .++.||||++++.. ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999852 47899999997553 2234468899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||++||+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+|||+++++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998754 4899999999999999999999 799999999999999999999999999999875433
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+ ..........+
T Consensus 180 ~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~------------ 244 (304)
T 3ubd_A 180 EK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE-TMTMILKAKLG------------ 244 (304)
T ss_dssp -C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCC------------
T ss_pred Cc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH-HHHHHHcCCCC------------
Confidence 22 2234579999999999999999999999999999999999999997643221 11111111100
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCH
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYM 950 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~ 950 (977)
. + ..++..+.+++.+||+.||++|||+
T Consensus 245 ~-p------~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 245 M-P------QFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp C-C------TTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred C-C------CcCCHHHHHHHHHHcccCHHHCCCC
Confidence 0 0 1123457889999999999999985
No 36
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.4e-47 Score=446.80 Aligned_cols=462 Identities=20% Similarity=0.243 Sum_probs=348.9
Q ss_pred cEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceecccc
Q 036011 77 MSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFN 156 (977)
Q Consensus 77 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n 156 (977)
++||+++|+++. +|..+. ++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|.++++|++|++++|
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 578999999986 777766 88999999999998777788889999999999999998777888888888888888888
Q ss_pred ccccccCccccCccccceeeeecccccc-cCCccccCCCCCceEEeeccCCCCCCchhhccccce--eEEEccCCccccc
Q 036011 157 IIDGNIPSRIGNLSSLVNVNLAYNNLQG-EIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTI--TLINLFGNQLSGH 233 (977)
Q Consensus 157 ~i~~~~p~~~~~l~~L~~L~L~~n~i~~-~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L--~~L~L~~N~l~~~ 233 (977)
.|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+..+++| +.|++++|.+.+
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~- 152 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG- 152 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT-
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc-
Confidence 887 56665 78888888888888876 467788888888888888888764 234444444 555555554411
Q ss_pred ccCCCccccCCCCceEEEecCceeeecCCccccccc-ccceEeeccccccccc-ccccccccccccccccccccCCCCCC
Q 036011 234 LDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNAS-KLTGLDLSFNSFSGLI-PHTFGNLRFLSVLNLANNYLTTDSPT 311 (977)
Q Consensus 234 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~ 311 (977)
.+..|..+..+. +...+++++|++.+.+ +..+..+++|+.|++++|.......
T Consensus 153 ------------------------~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~- 207 (520)
T 2z7x_B 153 ------------------------EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS- 207 (520)
T ss_dssp ------------------------SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTH-
T ss_pred ------------------------cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccc-
Confidence 334444444433 2334566666655433 2345666777777777765110000
Q ss_pred chhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCCh
Q 036011 312 AEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPS 391 (977)
Q Consensus 312 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 391 (977)
.....++.+..+++|+.|++++|.+.+..+. +.. ..+ ..++|++|++++|.+++.+|.
T Consensus 208 ~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~--------------------~~~-~~~-~~~~L~~L~l~~n~l~~~~p~ 265 (520)
T 2z7x_B 208 YFLSILAKLQTNPKLSNLTLNNIETTWNSFI--------------------RIL-QLV-WHTTVWYFSISNVKLQGQLDF 265 (520)
T ss_dssp HHHHHHHGGGGCTTCCEEEEEEEEEEHHHHH--------------------HHH-HHH-HTSSCSEEEEEEEEEESCCCC
T ss_pred eeecchhhhccccchhhccccccccCHHHHH--------------------HHH-HHh-hhCcccEEEeecccccCcccc
Confidence 0011223466777777777777765532111 111 111 245899999999999989999
Q ss_pred hh-----hccCCCCEEEeecccccCccc-cccccc---cccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCC
Q 036011 392 TV-----GRLEQLQGLSLYGNNLEGSIP-YDLCHL---ERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIP 462 (977)
Q Consensus 392 ~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 462 (977)
.+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|++.... .+..+++|++|++++|++++..|
T Consensus 266 ~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~ 341 (520)
T 2z7x_B 266 RDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVF 341 (520)
T ss_dssp CCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTT
T ss_pred chhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhh
Confidence 88 9999999999999999 455 555555 78999999999987432 13688999999999999999899
Q ss_pred ccccCcccCceEEccCCCCCC--CCccccccccccCeeeCcCCcCCCCcchh-hhcccccceeccCCccccccccccccC
Q 036011 463 SSFWSLEYLLAVNLSSNSLSG--SLPSNIQNLQVLINLDLSRNQLSGDIPIT-IGSLKDLVTLSLASNQFEGPIPQTFGS 539 (977)
Q Consensus 463 ~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 539 (977)
..+..+++|+.|++++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+.|+|++|++++.+|..+.
T Consensus 342 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~- 420 (520)
T 2z7x_B 342 ENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP- 420 (520)
T ss_dssp TTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC-
T ss_pred hhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc-
Confidence 999999999999999999996 45678999999999999999999757764 88899999999999999988887765
Q ss_pred ccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCCCC--CCCCcCCCCCcccCccccC
Q 036011 540 LTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIPAN--GPFKYFAPQSFSWNYALCG 603 (977)
Q Consensus 540 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~~~~~~~~~~n~~lcg 603 (977)
++|+.|||++|+|+ .+|..+..+++|++|++++|++++ +|.. ..+.......+++|+..|.
T Consensus 421 -~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 421 -PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp -TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred -ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCccc
Confidence 79999999999999 889988899999999999999994 6653 2344444556688877774
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.8e-47 Score=407.68 Aligned_cols=250 Identities=26% Similarity=0.387 Sum_probs=190.0
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch-hhHHHHHHHHHHHHhcCCCCcceEeeeeecCC--------
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD-RAFRSFDSECEVLRNVRHRNLIKIFSSCCNND-------- 752 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 752 (977)
++|++++.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46899999999999999999975 799999999976543 34567899999999999999999999987544
Q ss_pred ----eeEEEEeccCCCCHHHHhhcCCc--cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEee
Q 036011 753 ----FRALVLELMPNGSLEKWLYSDNY--FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSD 826 (977)
Q Consensus 753 ----~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 826 (977)
..|+|||||++|+|.+++..... ..++..++.++.||++||+||| ++||+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999987543 3567778999999999999999 78999999999999999999999999
Q ss_pred cccccccCCCCCcc----------eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHH
Q 036011 827 FGLSKLFDEGDDSV----------TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLK 896 (977)
Q Consensus 827 fgla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~ 896 (977)
||+|+.+....... ..+..+||+.|||||++.+..|+.++||||+||++|||++ ||..... ...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---~~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---RVR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH---HHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH---HHH
Confidence 99999875432211 1233579999999999999999999999999999999996 7643211 011
Q ss_pred HHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 897 KWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.. .. +.. ....+...+......+++.+||+.||++|||+.|++++
T Consensus 236 ~~-~~--------~~~------~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 TL-TD--------VRN------LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HH-HH--------HHT------TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HH-HH--------Hhc------CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 10 00 000 00011222334456789999999999999999999873
No 38
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.2e-45 Score=444.23 Aligned_cols=490 Identities=21% Similarity=0.188 Sum_probs=407.6
Q ss_pred CcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEec
Q 036011 50 QRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSL 129 (977)
Q Consensus 50 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 129 (977)
..+++|||++|.|++..|.+|+++++|++|||++|+|+++.|.+|.+|++|++|+|++|++++..+..|+.+++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 46899999999999655678999999999999999999988889999999999999999999666678999999999999
Q ss_pred cCcCCCCCCCCcccCcCcccceecccccccc-ccCccccCccccceeeeecccccccCCccccCCCCCc----eEEeecc
Q 036011 130 RNNSFTGPIPNSLFNLSRLEKWDSMFNIIDG-NIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLE----ILVLGMN 204 (977)
Q Consensus 130 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~-~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~----~L~l~~N 204 (977)
++|++++..+..|+++++|++|++++|.+++ .+|..++.+++|++|+|++|+|++..+..|..+.+++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999998777889999999999999999976 5689999999999999999999988888887766554 6888999
Q ss_pred CCCCCCchhhccccceeEEEccCCccccc----------------------------ccCCCccccCCCCceEEEecCce
Q 036011 205 NLSGPIQPSIFNISTITLINLFGNQLSGH----------------------------LDLPPKVSYSLPNLRVFSLGKNK 256 (977)
Q Consensus 205 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~----------------------------~~~~~~~~~~l~~L~~L~L~~N~ 256 (977)
.++... ...+....+..+++.+|..... .......+..+..+..+.+..+.
T Consensus 212 ~l~~i~-~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQ-PGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEEC-TTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccC-cccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 988544 3444455677777777743310 00111222233444555544433
Q ss_pred ee---ecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecC
Q 036011 257 LT---GTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVAS 333 (977)
Q Consensus 257 l~---~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~ 333 (977)
.. ...+..+....+++.+++.+|.+.... .+.....|+.|++.+|.+..+.. ..++.|+.+++..
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~----------~~l~~L~~l~l~~ 358 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT----------LKLKSLKRLTFTS 358 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC----------CBCTTCCEEEEES
T ss_pred hcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc----------ccchhhhhccccc
Confidence 22 234556777888999999999988653 46667889999999999887653 3467889999999
Q ss_pred CCCCCCCCcccccccccccccccccCccc--ccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccC
Q 036011 334 NPLRGILPPVIGNFSASLQNFYAYDCKLT--GNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEG 411 (977)
Q Consensus 334 N~l~~~~p~~~~~~~~~L~~L~l~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 411 (977)
|.+....+. .. .++++.+++.+|.+. +..+..+..+.+|+.|++..|.+. ..+..+..+++|+.++++.|+...
T Consensus 359 n~~~~~~~~--~~-l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~ 434 (635)
T 4g8a_A 359 NKGGNAFSE--VD-LPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ 434 (635)
T ss_dssp CCSCCBCCC--CB-CTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEES
T ss_pred ccCCCCccc--cc-ccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccc
Confidence 987754332 12 347889999999886 456777888999999999999987 466778899999999999988776
Q ss_pred ccc-cccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcC-CCCCCccccCcccCceEEccCCCCCCCCcccc
Q 036011 412 SIP-YDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKF-SSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNI 489 (977)
Q Consensus 412 ~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 489 (977)
..+ ..+..+.+++.+++++|++.+..+..+..+++|+.|+|++|++ .+..|..|..+++|+.|+|++|+|++..|..|
T Consensus 435 ~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 554 5678899999999999999999999999999999999999985 45678999999999999999999999899999
Q ss_pred ccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCc-cccCeeeccCCccCCC
Q 036011 490 QNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSL-TGLESLDLSNNNLSGE 556 (977)
Q Consensus 490 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~ 556 (977)
.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+ ++|+.|+|++|++++.
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred cCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 999999999999999998888999999999999999999999999999998 6899999999999864
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-43 Score=423.60 Aligned_cols=462 Identities=22% Similarity=0.242 Sum_probs=349.6
Q ss_pred cccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceecc
Q 036011 75 FLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSM 154 (977)
Q Consensus 75 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 154 (977)
..+++|+++|++++ +|..+. ++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..|.++++|++|+++
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 34889999999988 776664 789999999999987667888999999999999999988778888888888888888
Q ss_pred ccccccccCccccCccccceeeeecccccc-cCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCccccc
Q 036011 155 FNIIDGNIPSRIGNLSSLVNVNLAYNNLQG-EIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGH 233 (977)
Q Consensus 155 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 233 (977)
+|.|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++. .+..+++|
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L------------- 169 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHL------------- 169 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTS-------------
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhc-------------
Confidence 88887 56665 77888888888888875 3457788888888888888877642 22222222
Q ss_pred ccCCCccccCCCCceEEEecCcee--eecCCccccccc-ccceEeecccccccccc-cccccccccccccccccccCCCC
Q 036011 234 LDLPPKVSYSLPNLRVFSLGKNKL--TGTIPNSITNAS-KLTGLDLSFNSFSGLIP-HTFGNLRFLSVLNLANNYLTTDS 309 (977)
Q Consensus 234 ~~~~~~~~~~l~~L~~L~L~~N~l--~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 309 (977)
+|++|++++|++ ++..|..+..+. +...+++++|.+.+.++ ..+..+++|+.|++++|....
T Consensus 170 ------------~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~-- 235 (562)
T 3a79_B 170 ------------HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENC-- 235 (562)
T ss_dssp ------------CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTH--
T ss_pred ------------eeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccccccccc--
Confidence 236666666666 555666665543 12256777887765443 346678888888888885210
Q ss_pred CCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCC
Q 036011 310 PTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTI 389 (977)
Q Consensus 310 ~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 389 (977)
......++.+..+++|+.|++.++.+.+. .+.+ ++..+ ..++|++|++++|.+++.+
T Consensus 236 -~~l~~~~~~l~~l~~L~~L~L~~~~l~~~--------------------~~~~-~~~~~-~~~~L~~L~l~~n~l~~~i 292 (562)
T 3a79_B 236 -QRLMTFLSELTRGPTLLNVTLQHIETTWK--------------------CSVK-LFQFF-WPRPVEYLNIYNLTITERI 292 (562)
T ss_dssp -HHHHHHHHHHHSCSSCEEEEEEEEEECHH--------------------HHHH-HHHHH-TTSSEEEEEEEEEEECSCC
T ss_pred -chHHHHHHHHhccCcceEEEecCCcCcHH--------------------HHHH-HHHhh-hcccccEEEEeccEeeccc
Confidence 01112334577888899998888766531 1221 11112 2358999999999999888
Q ss_pred Chhh-----hccCCCCEEEeecccccCccc-ccccc---ccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCC
Q 036011 390 PSTV-----GRLEQLQGLSLYGNNLEGSIP-YDLCH---LERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSS 460 (977)
Q Consensus 390 p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 460 (977)
|..+ ..++.|+.++++.|.+ .+| ..+.. ..+|+.|++++|++.... ....+++|++|++++|++++.
T Consensus 293 p~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~ 368 (562)
T 3a79_B 293 DREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDS 368 (562)
T ss_dssp CCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTT
T ss_pred cchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccc
Confidence 8887 7777777777887777 344 33333 367999999999986332 126889999999999999999
Q ss_pred CCccccCcccCceEEccCCCCCCC--CccccccccccCeeeCcCCcCCCCcch-hhhcccccceeccCCccccccccccc
Q 036011 461 IPSSFWSLEYLLAVNLSSNSLSGS--LPSNIQNLQVLINLDLSRNQLSGDIPI-TIGSLKDLVTLSLASNQFEGPIPQTF 537 (977)
Q Consensus 461 ~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~ 537 (977)
.|..+.++++|+.|++++|++++. +|..|.++++|++|+|++|++++.+|. .+..+++|+.|+|++|++++.+|..+
T Consensus 369 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 448 (562)
T 3a79_B 369 VFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL 448 (562)
T ss_dssp TTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSC
T ss_pred hhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhh
Confidence 999999999999999999999964 356799999999999999999975665 58899999999999999998877766
Q ss_pred cCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCCCC--CCCCcCCCCCcccCccccC
Q 036011 538 GSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIPAN--GPFKYFAPQSFSWNYALCG 603 (977)
Q Consensus 538 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~~~~~~~~~~n~~lcg 603 (977)
. ++|+.|+|++|+|+ .+|..+..+++|++|++++|++++ +|.. ..+.......+++|+..|.
T Consensus 449 ~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 449 P--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp C--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred c--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCC
Confidence 5 79999999999999 788888899999999999999995 6553 3444555566788887774
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-43 Score=390.39 Aligned_cols=295 Identities=30% Similarity=0.475 Sum_probs=275.8
Q ss_pred ccChHHHHHHHHHHHHhccCCCCCccCCCCCCCCCCc--ccceEecCCC--CcEEEEEcCCCCCCc--cCCccccCcccc
Q 036011 3 VQNLTTDQFALLAFKAHVTDPQSVLANNWSISQPICK--WVGISCGARH--QRVRALNLSNMGLRG--TIPPHLGNFSFL 76 (977)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~L~l~~~~l~~--~~~~~l~~l~~L 76 (977)
+.|.++|++||++||+++.+|. .+ ++|..++|||. |.||+|+..+ ++|+.|+|++++++| .+|+.++++++|
T Consensus 1 ~~c~~~~~~aL~~~k~~~~~~~-~l-~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDLGNPT-TL-SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCG-GG-TTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCCHHHHHHHHHHHHhcCCcc-cc-cCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 3588999999999999998876 44 68988889998 9999998765 899999999999999 899999999999
Q ss_pred cEeeccC-CcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccc
Q 036011 77 MSLDISK-NNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMF 155 (977)
Q Consensus 77 ~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~ 155 (977)
++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..++.+++|++|+|++|.+++.+|..+.++++|++|++++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999995 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCccccCcc-ccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccc
Q 036011 156 NIIDGNIPSRIGNLS-SLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHL 234 (977)
Q Consensus 156 n~i~~~~p~~~~~l~-~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 234 (977)
|.+++.+|..++.++ +|++|++++|++++.+|..++.++ |++|++++|++++..+..+..+++|+.|+|++|++++.
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~- 236 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD- 236 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB-
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee-
Confidence 999999999999998 999999999999999999999997 99999999999999999999999999999999999853
Q ss_pred cCCCccccCCCCceEEEecCceeeecCCcccccccccceEeeccccccccccccccccccccccccccccc
Q 036011 235 DLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYL 305 (977)
Q Consensus 235 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 305 (977)
++. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+.
T Consensus 237 --~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~ 303 (313)
T 1ogq_A 237 --LGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKC 303 (313)
T ss_dssp --GGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSE
T ss_pred --cCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCC
Confidence 223 567899999999999999999999999999999999999999888876 8899999999999983
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.7e-44 Score=397.55 Aligned_cols=202 Identities=23% Similarity=0.287 Sum_probs=172.5
Q ss_pred HHhhcCCCcCccccCcceEEEEEEEeC----CCCEEEEEEeeccchhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCe
Q 036011 679 QRATDGFNECNLLGRGSFGSVYKGTFS----DGTSFAIKVFNLQLDRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDF 753 (977)
Q Consensus 679 ~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 753 (977)
....+.|++.+.||+|+||+||+|+.+ .++.||||++.... ...++.+|+++++.+ +||||+++++++.+.+.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 345678999999999999999999853 46889999986543 235678999999998 69999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCC-CceEEeecccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDED-MVAHVSDFGLSKL 832 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfgla~~ 832 (977)
.++||||+++|+|.+++.. +++.++..++.|++.||+||| ++||+||||||+|||++.+ +.+||+|||+|+.
T Consensus 95 ~~lvmE~~~g~~L~~~~~~----l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILNS----LSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEEECCCCCCHHHHHTT----CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEeCCCcccHHHHHcC----CCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 9999999999999999843 889999999999999999999 8999999999999999876 7999999999986
Q ss_pred cCCCCCc--------------------------ceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCC
Q 036011 833 FDEGDDS--------------------------VTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPT 885 (977)
Q Consensus 833 ~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~ 885 (977)
....... ...+..+||++|+|||++.+. .|+.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 5432211 112234799999999998775 5899999999999999999999999
Q ss_pred CcCC
Q 036011 886 DDMF 889 (977)
Q Consensus 886 ~~~~ 889 (977)
....
T Consensus 248 ~~~~ 251 (361)
T 4f9c_A 248 YKAS 251 (361)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 6543
No 42
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-44 Score=401.52 Aligned_cols=268 Identities=23% Similarity=0.260 Sum_probs=202.0
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeec------CCe
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN------NDF 753 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 753 (977)
++|++++.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999975 79999999997543 3345678899999999999999999998753 367
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.|+|||||+ |+|.+++...+ .+++..+..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 68999997655 4999999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCC--cceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC--CCchh
Q 036011 834 DEGDD--SVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL--PHGLM 908 (977)
Q Consensus 834 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~ 908 (977)
..... .......+||+.|||||++.+. .|+.++||||+||++|||++|+.||.+....+ .+........ +....
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCGGGT
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCChHHh
Confidence 54321 1223446899999999998775 57999999999999999999999997643221 1222221111 00000
Q ss_pred hhcc----h----hhhccccCc--hHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 909 EVVD----T----NLLRQEHTS--SAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 909 ~~~~----~----~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.... . .+....... .........+.+++.+|++.||++|||+.|++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 0 000000000 0001123457899999999999999999999875
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.8e-43 Score=404.31 Aligned_cols=403 Identities=26% Similarity=0.307 Sum_probs=193.8
Q ss_pred CcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccce
Q 036011 72 NFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKW 151 (977)
Q Consensus 72 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 151 (977)
..++|++|++++|++ +.+|++|+++++|++|+|++|+++|.+|.+++.+++|+++++++|.. .+|++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 345566666666666 44565666666666666666666655666666665555555554432 234455
Q ss_pred eccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCccc
Q 036011 152 DSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLS 231 (977)
Q Consensus 152 ~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 231 (977)
++++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++.
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l---------------------- 126 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL---------------------- 126 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC----------------------
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc----------------------
Confidence 555555442 2221 2345555555555553 4432 24555555555555431
Q ss_pred ccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCC
Q 036011 232 GHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPT 311 (977)
Q Consensus 232 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 311 (977)
+.. .++|++|++++|++++ +| .+.++++|++|++++|++++ +|..+ .+|++|++++|++++++
T Consensus 127 -----~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~-- 189 (454)
T 1jl5_A 127 -----SDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP-- 189 (454)
T ss_dssp -----CSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC--
T ss_pred -----cCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc--
Confidence 110 1345555555555553 44 35555555555555555554 23222 35555555555555432
Q ss_pred chhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCCh
Q 036011 312 AEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPS 391 (977)
Q Consensus 312 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 391 (977)
.+..+++|++|++++|.+.+ +|.. ..+|+.|++++|+++ .+| .++.+++|++|++++|++++ +|.
T Consensus 190 -------~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~ 254 (454)
T 1jl5_A 190 -------ELQNLPFLTAIYADNNSLKK-LPDL----PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD 254 (454)
T ss_dssp -------CCTTCTTCCEEECCSSCCSS-CCCC----CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS
T ss_pred -------cccCCCCCCEEECCCCcCCc-CCCC----cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccc
Confidence 14455555555555555553 2211 124555555555555 445 36677777777777777774 443
Q ss_pred hhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCc-cc
Q 036011 392 TVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSL-EY 470 (977)
Q Consensus 392 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~ 470 (977)
. +++|++|++++|++++ +|.. .++|+.|++++|++++ +|.. .++|++|++++|++++ ++ .+ ++
T Consensus 255 ~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~----~~~~~ 318 (454)
T 1jl5_A 255 L---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LC----DLPPS 318 (454)
T ss_dssp C---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-EC----CCCTT
T ss_pred c---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-cc----CCcCc
Confidence 2 3677777777777774 4433 3677777777777774 2211 1467777777777774 22 22 46
Q ss_pred CceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccc--cccccccCccccCeeec
Q 036011 471 LLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEG--PIPQTFGSLTGLESLDL 548 (977)
Q Consensus 471 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L 548 (977)
|+.|++++|++++ +|.. +++|++|++++|+++ .+|. .+++|+.|+|++|++++ .+|.+++.+
T Consensus 319 L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L-------- 382 (454)
T 1jl5_A 319 LEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL-------- 382 (454)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------
T ss_pred CCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------
Confidence 7777777777775 4443 466777777777777 4555 46777777777777776 556655443
Q ss_pred cCCccCCCCCcccccccccCccccCCCcccc--cCCC
Q 036011 549 SNNNLSGEIPKSLEALLFLKQLNVSHNKLEG--EIPA 583 (977)
Q Consensus 549 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~ 583 (977)
+.|++.|.+|.. +++|+.|++++|+++| .+|.
T Consensus 383 ~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 383 RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp ECCC---------------------------------
T ss_pred hhcccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 234555555542 3567777777777776 5553
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.8e-42 Score=402.90 Aligned_cols=394 Identities=21% Similarity=0.249 Sum_probs=246.1
Q ss_pred cEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceecccc
Q 036011 77 MSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFN 156 (977)
Q Consensus 77 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n 156 (977)
+.++.++++++. +|. + .++|++|+|++|.+++..|..|+.+++|++|+|++|.+.+.++
T Consensus 13 ~~~~c~~~~l~~-lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~----------------- 71 (455)
T 3v47_A 13 YNAICINRGLHQ-VPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIR----------------- 71 (455)
T ss_dssp TEEECCSSCCSS-CCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEEC-----------------
T ss_pred cccCcCCCCccc-CCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceEC-----------------
Confidence 345666666655 444 2 2566666666666665556666666666666666666553321
Q ss_pred ccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccC
Q 036011 157 IIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDL 236 (977)
Q Consensus 157 ~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 236 (977)
|..|+++++|++|+|++|++++..|..|+++++|++|++++|++++..+..
T Consensus 72 ------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----------------------- 122 (455)
T 3v47_A 72 ------NNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG----------------------- 122 (455)
T ss_dssp ------TTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHS-----------------------
T ss_pred ------cccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCc-----------------------
Confidence 233444555555555555555444555555555555555555554322211
Q ss_pred CCccccCCCCceEEEecCceeeecCCcc-cccccccceEeecccccccccccccccc--cccccccccccccCCCCCCch
Q 036011 237 PPKVSYSLPNLRVFSLGKNKLTGTIPNS-ITNASKLTGLDLSFNSFSGLIPHTFGNL--RFLSVLNLANNYLTTDSPTAE 313 (977)
Q Consensus 237 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~ 313 (977)
..+..+++|++|+|++|++++..|.. +..+++|++|+|++|++++..+..+..+ .+|+.|++++|.+..+++...
T Consensus 123 --~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~ 200 (455)
T 3v47_A 123 --NFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWL 200 (455)
T ss_dssp --STTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCT
T ss_pred --ccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhc
Confidence 11223344444444444444444443 5556666666666666666555555554 455666666665554433210
Q ss_pred hhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhh
Q 036011 314 WSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTV 393 (977)
Q Consensus 314 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 393 (977)
. ......+..+++|++|++++|.+++..|..+
T Consensus 201 -------------------------------~-----------------~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 201 -------------------------------G-----------------WEKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp -------------------------------T-----------------HHHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred -------------------------------c-----------------ccccccccccceeeeEecCCCcccccchhhh
Confidence 0 0000112233455555555555555555554
Q ss_pred hcc---CCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcC--CCCCCeeecCCCcCCCCCCccccCc
Q 036011 394 GRL---EQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLAS--LISLRELNLGSNKFSSSIPSSFWSL 468 (977)
Q Consensus 394 ~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l 468 (977)
... ++|+.|++++|.+.+.. +..+.+.+..+..+.. .++|++|++++|++.+..|..|..+
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred hccccccceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 443 56666666666654321 1122222222222332 3578888888888888888888888
Q ss_pred ccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeec
Q 036011 469 EYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDL 548 (977)
Q Consensus 469 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 548 (977)
++|+.|++++|++++..|..|.++++|++|+|++|++++..|..|+.+++|+.|+|++|++++..|..|..+++|++|+|
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 378 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELAL 378 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEEC
Confidence 88888888888888777888888889999999999998777888888999999999999998888888999999999999
Q ss_pred cCCccCCCCCcccccccccCccccCCCcccccCCCC
Q 036011 549 SNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIPAN 584 (977)
Q Consensus 549 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 584 (977)
++|+|++..+..+..+++|++|++++|+++|.+|..
T Consensus 379 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 379 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 999998766667788999999999999999988853
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.2e-42 Score=402.22 Aligned_cols=384 Identities=21% Similarity=0.205 Sum_probs=240.6
Q ss_pred EEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCC-CccccccccCcEEeccCcC
Q 036011 55 LNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSF-PSWIGVLSKLQILSLRNNS 133 (977)
Q Consensus 55 L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~ 133 (977)
++.++++++ .+|. + .++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+.+++|++|+|++|.
T Consensus 15 ~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~ 90 (455)
T 3v47_A 15 AICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90 (455)
T ss_dssp EECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT
T ss_pred cCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCc
Confidence 344555666 6776 3 378999999999999988999999999999999999998666 5679999999999999999
Q ss_pred CCCCCCCcccCcCcccceeccccccccccCcc--ccCccccceeeeecccccccCCcc-ccCCCCCceEEeeccCCCCCC
Q 036011 134 FTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSR--IGNLSSLVNVNLAYNNLQGEIPSE-IGNLQNLEILVLGMNNLSGPI 210 (977)
Q Consensus 134 l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~--~~~l~~L~~L~L~~n~i~~~~p~~-l~~l~~L~~L~l~~N~l~~~~ 210 (977)
+++..|..|.++++|++|++++|.+++.+|.. |+++++|++|+|++|++++..|.. +.++++|++|++++|++++..
T Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 170 (455)
T 3v47_A 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSIC 170 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCC
T ss_pred cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccC
Confidence 99888999999999999999999998866655 999999999999999999877776 899999999999999999888
Q ss_pred chhhccc--cceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccc
Q 036011 211 QPSIFNI--STITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHT 288 (977)
Q Consensus 211 ~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 288 (977)
+..+..+ .+|+.|++++|.+.+. ++..+. ......+..+++|++|++++|++++..|..
T Consensus 171 ~~~l~~l~~~~L~~L~l~~n~l~~~---~~~~~~----------------~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~ 231 (455)
T 3v47_A 171 EEDLLNFQGKHFTLLRLSSITLQDM---NEYWLG----------------WEKCGNPFKNTSITTLDLSGNGFKESMAKR 231 (455)
T ss_dssp TTTSGGGTTCEEEEEECTTCBCTTC---STTCTT----------------HHHHCCTTTTCEEEEEECTTSCCCHHHHHH
T ss_pred hhhhhccccccccccccccCccccc---chhhcc----------------ccccccccccceeeeEecCCCcccccchhh
Confidence 7777765 5677777777766532 211110 000111234455666666666666555554
Q ss_pred cccc---cccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccC
Q 036011 289 FGNL---RFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNI 365 (977)
Q Consensus 289 ~~~l---~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~ 365 (977)
+..+ ++|+.|++++|.+..... ..+.+. ...
T Consensus 232 ~~~~~~~~~L~~L~l~~~~~~~~~~---------------------~~~~~~-------------------------~~~ 265 (455)
T 3v47_A 232 FFDAIAGTKIQSLILSNSYNMGSSF---------------------GHTNFK-------------------------DPD 265 (455)
T ss_dssp HHHHTTTCCEEEEECTTCTTTSCCT---------------------TCCSSC-------------------------CCC
T ss_pred hhccccccceeeEeecccccccccc---------------------chhhhc-------------------------cCc
Confidence 4433 455555555554332110 001111 011
Q ss_pred Ccccc--ccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcC
Q 036011 366 PHEIG--NLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLAS 443 (977)
Q Consensus 366 p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 443 (977)
+..+. ..++|++|++++|.+.+..|..++.+++|++|+|++|++++..|..|..+++|+.|++++|++++..|..|..
T Consensus 266 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 345 (455)
T 3v47_A 266 NFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345 (455)
T ss_dssp TTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTT
T ss_pred ccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcC
Confidence 11111 1234555555555555555555555555555555555555444444545555555555555554444444444
Q ss_pred CCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCC
Q 036011 444 LISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSG 507 (977)
Q Consensus 444 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 507 (977)
+++|++|+|++|++++..|..|..+++|+.|++++|+|++..+..|..+++|++|+|++|++++
T Consensus 346 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 409 (455)
T 3v47_A 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 409 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCccc
Confidence 4555555555555444444444444444444444444443333333444444444444444443
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.3e-42 Score=404.76 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=198.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHH---HHHHHHHHhcCCCCcceEeeeeecCCee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSF---DSECEVLRNVRHRNLIKIFSSCCNNDFR 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~---~~e~~~l~~l~h~niv~l~~~~~~~~~~ 754 (977)
.++|++.++||+|+||+||+|+.. +|+.||||++.+.. ......+ ..++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999975 69999999997643 1112223 3446677788999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 755 ALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
|+||||++||+|.+++...+ .+++..+..++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999998754 4899999999999999999999 8999999999999999999999999999998775
Q ss_pred CCCCcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc-cHHHHHHhhCCCchhhhcc
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM-SLKKWVKESLPHGLMEVVD 912 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 912 (977)
... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+...... .+.......
T Consensus 344 ~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~---------- 409 (689)
T 3v5w_A 344 KKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---------- 409 (689)
T ss_dssp SCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC----------
T ss_pred CCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC----------
Confidence 432 233579999999999864 5799999999999999999999999976432221 111111100
Q ss_pred hhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 036011 913 TNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIY-----MTDAAV 955 (977)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~ev~~ 955 (977)
..... ..+...+.+++.+|++.||.+|++ ++||.+
T Consensus 410 -~~~~p-------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 410 -AVELP-------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -CCCCC-------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -CCCCC-------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 00000 112345688999999999999998 677754
No 47
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=9.5e-43 Score=410.85 Aligned_cols=253 Identities=23% Similarity=0.285 Sum_probs=211.3
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+.+..++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999975 7999999999876666667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCC--CceEEeecccccccCCCCC
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDED--MVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~--~~~kl~Dfgla~~~~~~~~ 838 (977)
|+||+|.+++......+++..+..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999776666999999999999999999999 7899999999999999854 899999999999876533
Q ss_pred cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ .+..........
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~-~~~~i~~~~~~~------------- 375 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRNVKSCDWNM------------- 375 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTCCCC-------------
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHhCCCCC-------------
Confidence 2334579999999999999999999999999999999999999997643221 111111111100
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.......+...+.+++.+||+.||.+|||+.|++++
T Consensus 376 --~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 376 --DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp --CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000111223456889999999999999999999874
No 48
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.4e-42 Score=381.96 Aligned_cols=280 Identities=34% Similarity=0.559 Sum_probs=232.6
Q ss_pred HHHHHHhhcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCee
Q 036011 675 YLDIQRATDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFR 754 (977)
Q Consensus 675 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 754 (977)
+.++...+++|+..+.||+|+||+||+|+.++|+.||||++........+.+.+|+++++.++||||+++++++.+.+..
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 33455678899999999999999999999888999999998876666678899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCC---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccc
Q 036011 755 ALVLELMPNGSLEKWLYSDN---YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSK 831 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 831 (977)
++||||+++|+|.+++.... ..+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999999999997643 25899999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcc-cccHHHHHHhhCCCc-hhh
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTG-EMSLKKWVKESLPHG-LME 909 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~-~~~ 909 (977)
...............||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ......|........ +..
T Consensus 188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (321)
T 2qkw_B 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267 (321)
T ss_dssp ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence 765433333334456899999999998889999999999999999999999999765433 234455544332222 333
Q ss_pred hcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 910 VVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.+++.... ....+++..+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 268 ~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 268 IVDPNLAD-----KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSSCTT-----CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcChhhcc-----ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 33333221 1123567789999999999999999999999999998764
No 49
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.6e-42 Score=379.52 Aligned_cols=291 Identities=36% Similarity=0.523 Sum_probs=239.5
Q ss_pred hhccCCCHHHHHHhhcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccch-hhHHHHHHHHHHHHhcCCCCcceEee
Q 036011 668 AAWRRTSYLDIQRATDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLD-RAFRSFDSECEVLRNVRHRNLIKIFS 746 (977)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~ 746 (977)
.....+++.++....++|++.+.||+|+||+||+|+..+|+.||||++..... .....+.+|+++++.++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 34567888999999999999999999999999999988899999999876542 22346899999999999999999999
Q ss_pred eeecCCeeEEEEeccCCCCHHHHhhcCCc---cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceE
Q 036011 747 SCCNNDFRALVLELMPNGSLEKWLYSDNY---FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAH 823 (977)
Q Consensus 747 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 823 (977)
++.+.+..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+.+..||+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999999986543 489999999999999999999954444999999999999999999999
Q ss_pred EeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcC---CcccccHHHHHH
Q 036011 824 VSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDM---FTGEMSLKKWVK 900 (977)
Q Consensus 824 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~---~~~~~~~~~~~~ 900 (977)
|+|||+++........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||+.. .........|..
T Consensus 175 l~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 9999999877543322 233456999999999998889999999999999999999999999632 233455667766
Q ss_pred hhCCCc-hhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhcC
Q 036011 901 ESLPHG-LMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKIIG 964 (977)
Q Consensus 901 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~~ 964 (977)
...... .....+...... ...+....+.+++.+||+.+|.+|||++|++++|++.....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~ 313 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGN-----YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 313 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTS-----CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSS
T ss_pred HHhhchhhhhhcChhhccc-----cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhh
Confidence 655443 334444333221 12355678999999999999999999999999998766433
No 50
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.5e-41 Score=391.85 Aligned_cols=406 Identities=25% Similarity=0.291 Sum_probs=195.3
Q ss_pred CcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCC-------------CEEeCcCccCCCCCCc
Q 036011 50 QRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRL-------------RFISLDYNEFSGSFPS 116 (977)
Q Consensus 50 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~L~~n~l~~~~p~ 116 (977)
.++++|+++++++ |.+|++++++++|++|++++|.+++.+|.+++++++| ++|++++|+++ .+|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCCC
Confidence 5689999999999 7999999999999999999999999999999999987 55555555555 2333
Q ss_pred cccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCC
Q 036011 117 WIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNL 196 (977)
Q Consensus 117 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L 196 (977)
. .++|++|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|++++ +| .|+++++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 1 2445555555555553 3432 2445555555554442 1211 1344555555555542 34 34445555
Q ss_pred ceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEee
Q 036011 197 EILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDL 276 (977)
Q Consensus 197 ~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 276 (977)
++|++++|++++ +|.. ..+|++|++++|++++ +| .+..+++|++|++
T Consensus 156 ~~L~l~~N~l~~---------------------------lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 156 KIIDVDNNSLKK---------------------------LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp CEEECCSSCCSC---------------------------CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CEEECCCCcCcc---------------------------cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 555555544442 2211 1355566666666553 34 3555666666666
Q ss_pred cccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCccccccccccccccc
Q 036011 277 SFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYA 356 (977)
Q Consensus 277 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l 356 (977)
++|+++++ |... ++|++|++++|.++.++. +..+++|++|++++|.+++. |.
T Consensus 203 ~~N~l~~l-~~~~---~~L~~L~l~~n~l~~lp~---------~~~l~~L~~L~l~~N~l~~l-~~-------------- 254 (454)
T 1jl5_A 203 DNNSLKKL-PDLP---LSLESIVAGNNILEELPE---------LQNLPFLTTIYADNNLLKTL-PD-------------- 254 (454)
T ss_dssp CSSCCSSC-CCCC---TTCCEEECCSSCCSSCCC---------CTTCTTCCEEECCSSCCSSC-CS--------------
T ss_pred CCCcCCcC-CCCc---CcccEEECcCCcCCcccc---------cCCCCCCCEEECCCCcCCcc-cc--------------
Confidence 66666542 2221 356666666666554331 44556666666666655531 11
Q ss_pred ccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCC
Q 036011 357 YDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGP 436 (977)
Q Consensus 357 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 436 (977)
.+++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|+.|++++|++++
T Consensus 255 --------------~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~- 311 (454)
T 1jl5_A 255 --------------LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS- 311 (454)
T ss_dssp --------------CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-
T ss_pred --------------cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-
Confidence 11345555555555553 3332 2566677777776664 2211 1567777777777763
Q ss_pred chhhhcCC-CCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCC--Ccchhh
Q 036011 437 IPQCLASL-ISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSG--DIPITI 513 (977)
Q Consensus 437 ~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~ 513 (977)
++ .+ ++|++|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|++|++++|++++ .+|..+
T Consensus 312 i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l 379 (454)
T 1jl5_A 312 LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESV 379 (454)
T ss_dssp EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTC
T ss_pred cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHH
Confidence 22 22 478888888888885 4543 4778888888888884 555 46788899999999887 566655
Q ss_pred hcccccceeccCCccccccccccccCccccCeeeccCCccCC--CCCcccccccccCccccCCCcccccCCC
Q 036011 514 GSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSG--EIPKSLEALLFLKQLNVSHNKLEGEIPA 583 (977)
Q Consensus 514 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 583 (977)
+.+ +.|.+.+.+|.. +++|+.|||++|++++ .+|.+ ++.|.+.+|.+.+.+|.
T Consensus 380 ~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 380 EDL--------RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp CEE--------ECCC---------------------------------------------------------
T ss_pred Hhh--------hhcccccccccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 433 346677777763 5789999999999987 66654 56677888998887764
No 51
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-41 Score=375.67 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=211.0
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC----eeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND----FRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv 757 (977)
.++|++.+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++||||+++++++.+.. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 367899999999999999999875 7999999997553 33455677999999999999999999998744 36899
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCC----------CeEeCCCCCCceeeCCCCceEEeec
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHST----------PVVHCDLKPSNILLDEDMVAHVSDF 827 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~----------~ivH~dlk~~NIll~~~~~~kl~Df 827 (977)
|||+++|+|.++++... +++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999998754 899999999999999999999 66 9999999999999999999999999
Q ss_pred ccccccCCCCCcceeeccccCCcccCccccCC-----CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc---------
Q 036011 828 GLSKLFDEGDDSVTQTMTIATIGYMAPEYGTE-----GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM--------- 893 (977)
Q Consensus 828 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~--------- 893 (977)
|+++.+.............||+.|+|||++.+ ..++.++|||||||++|||+||+.||........
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99988765443333344579999999999876 4577889999999999999999999976433211
Q ss_pred --cHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 894 --SLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 894 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
....+.......... ...........+...+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 256 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKR--------PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp SCCHHHHHHHHTTSCCC--------CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCC--------CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111111111111100 0001111122355678999999999999999999999999999875
No 52
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.7e-41 Score=369.78 Aligned_cols=258 Identities=24% Similarity=0.411 Sum_probs=215.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
.++|.+.+.||+|+||+||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357888999999999999999975 6999999998766666778899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcc
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 840 (977)
+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999986667999999999999999999999 7899999999999999999999999999998765432211
Q ss_pred e------------eeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc----cHHHHHHhhCC
Q 036011 841 T------------QTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM----SLKKWVKESLP 904 (977)
Q Consensus 841 ~------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~----~~~~~~~~~~~ 904 (977)
. .....||+.|+|||++.+..++.++||||+|+++|||++|..|+........ ..........+
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCP 245 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCC
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCC
Confidence 0 1134699999999999999999999999999999999999999876433221 11111111100
Q ss_pred CchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhc
Q 036011 905 HGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKII 963 (977)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~ 963 (977)
..++..+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 246 ---------------------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 246 ---------------------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp ---------------------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11233578899999999999999999999999998753
No 53
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.2e-40 Score=363.52 Aligned_cols=251 Identities=23% Similarity=0.300 Sum_probs=209.5
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
.++|++.+.||+|+||+||+|+. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999996 47999999999877666667789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcc
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 840 (977)
+++|+|.+++.... +++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 99999999998754 899999999999999999999 78999999999999999999999999999987754332
Q ss_pred eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcccc
Q 036011 841 TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEH 920 (977)
Q Consensus 841 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (977)
......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .........+. .
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~---------~----- 236 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPE---------L----- 236 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCSCC---------C-----
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCC---------C-----
Confidence 23345699999999999999999999999999999999999999975422211 11111111100 0
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 921 TSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..+..+...+.+++.+||+.||++|||++|++++
T Consensus 237 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 237 --QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp --SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0011234457899999999999999999999874
No 54
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.5e-41 Score=369.77 Aligned_cols=268 Identities=26% Similarity=0.363 Sum_probs=204.2
Q ss_pred hhcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
..++|++.+.||+|+||+||+|+. .|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 346788999999999999999987 68899999987553 344567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCc--cCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 759 ELMPNGSLEKWLYSDNY--FLDLLERLNIMIGVALALEYLHHGHSTP--VVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
||+++|+|.+++..... .+++..++.++.|++.||+||| +.| |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999987543 4899999999999999999999 788 9999999999999999999999999998654
Q ss_pred CCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ ....+......
T Consensus 191 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~~~~~--------- 257 (309)
T 3p86_A 191 STF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGFKCKR--------- 257 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHHSCCC---------
T ss_pred ccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcCCC---------
Confidence 322 12233569999999999999999999999999999999999999997643221 11111100000
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhcCcccccccc
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKIIGVLVLSRAE 972 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~~~ 972 (977)
. ..+..+...+.+++.+||+.+|++|||++|+++.|+.+.....++-.|++
T Consensus 258 ~-------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~~~~ 308 (309)
T 3p86_A 258 L-------EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRSD 308 (309)
T ss_dssp C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----------
T ss_pred C-------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCCccc
Confidence 0 00012234578999999999999999999999999998876666655554
No 55
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.5e-41 Score=378.41 Aligned_cols=259 Identities=25% Similarity=0.422 Sum_probs=213.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeC--------CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecC
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS--------DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNN 751 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 751 (977)
.++|++.+.||+|+||+||+|+.. ++..||||+++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467889999999999999999852 35679999997653 34457799999999999 899999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee
Q 036011 752 DFRALVLELMPNGSLEKWLYSDN---------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL 816 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 816 (977)
+..++||||+++|+|.+++.... ..+++..+..++.||++||+||| +.||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999998653 24789999999999999999999 7899999999999999
Q ss_pred CCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccH
Q 036011 817 DEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSL 895 (977)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 895 (977)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--L 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--H
Confidence 9999999999999987765433333334457889999999999999999999999999999999 999987643221 1
Q ss_pred HHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 896 KKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.......... ..+..+...+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 315 ~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 315 FKLLKEGHRM-----------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHHHHTTCCC-----------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCC-----------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111111000 0011234468899999999999999999999999998764
No 56
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.7e-40 Score=360.11 Aligned_cols=282 Identities=29% Similarity=0.453 Sum_probs=229.2
Q ss_pred hccCCCHHHHHHhhcCCCcC------ccccCcceEEEEEEEeCCCCEEEEEEeeccc----hhhHHHHHHHHHHHHhcCC
Q 036011 669 AWRRTSYLDIQRATDGFNEC------NLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL----DRAFRSFDSECEVLRNVRH 738 (977)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h 738 (977)
....+++.++..+++.|... +.||+|+||+||+|+. +++.||||++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678899999999998877 8999999999999987 68899999986532 3345779999999999999
Q ss_pred CCcceEeeeeecCCeeEEEEeccCCCCHHHHhhcC--CccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee
Q 036011 739 RNLIKIFSSCCNNDFRALVLELMPNGSLEKWLYSD--NYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL 816 (977)
Q Consensus 739 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 816 (977)
|||+++++++.+.+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.||+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999998743 235899999999999999999999 7899999999999999
Q ss_pred CCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHH
Q 036011 817 DEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLK 896 (977)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~ 896 (977)
+.++.+||+|||++................||+.|+|||++.+ .++.++||||+|+++|+|++|..||....... ...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLL 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHH
Confidence 9999999999999987765443333344569999999998765 58999999999999999999999997654332 222
Q ss_pred HHHHhh--CCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 897 KWVKES--LPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 897 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.+.... ....+.+.++..+. .....++..+.+++.+||+.+|.+|||+.+++++|++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMN------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCS------CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhcccccc------ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 222211 11223333333221 1123456778999999999999999999999999998863
No 57
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.1e-40 Score=377.67 Aligned_cols=363 Identities=18% Similarity=0.216 Sum_probs=204.1
Q ss_pred CCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCc
Q 036011 62 LRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNS 141 (977)
Q Consensus 62 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 141 (977)
..+..+.+++++++|++|+|++|.+++ +| .++.+++|++|+|++|++++ +| ++.+++|++|+|++|.+++. |
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--
Confidence 344455667788888888888888887 45 67888888888888888874 44 77788888888888888753 3
Q ss_pred ccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhcccccee
Q 036011 142 LFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTIT 221 (977)
Q Consensus 142 l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~ 221 (977)
++++++|++|++++|.+++ +| ++.+++|++|++++|++++ ++ ++++++|++|++++|+..+.+ .+..+
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l---- 169 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQ---- 169 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTC----
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccC----
Confidence 6777777777777777765 33 6777777777777777775 32 667777777777777544333 23344
Q ss_pred EEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeeccccccccccccccccccccccccc
Q 036011 222 LINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLA 301 (977)
Q Consensus 222 ~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 301 (977)
++|++|++++|++++ +| +..+++|++|++++|++++. .++.+++|+.|+++
T Consensus 170 -----------------------~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls 220 (457)
T 3bz5_A 170 -----------------------TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCS 220 (457)
T ss_dssp -----------------------TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECC
T ss_pred -----------------------CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECc
Confidence 445555555555553 23 44555555555555555543 25555566666666
Q ss_pred ccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEee
Q 036011 302 NNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLF 381 (977)
Q Consensus 302 ~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 381 (977)
+|++++++ +..+++|+.|++++|++++.. ++.+++|+.|+++
T Consensus 221 ~N~l~~ip----------~~~l~~L~~L~l~~N~l~~~~----------------------------~~~l~~L~~L~l~ 262 (457)
T 3bz5_A 221 SNKLTEID----------VTPLTQLTYFDCSVNPLTELD----------------------------VSTLSKLTTLHCI 262 (457)
T ss_dssp SSCCSCCC----------CTTCTTCSEEECCSSCCSCCC----------------------------CTTCTTCCEEECT
T ss_pred CCcccccC----------ccccCCCCEEEeeCCcCCCcC----------------------------HHHCCCCCEEecc
Confidence 66655532 334455555555555544321 1233444444444
Q ss_pred cCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCC
Q 036011 382 INALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSI 461 (977)
Q Consensus 382 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 461 (977)
+| +|+.|++++|.+.+.+| +..+++|+.|++++|++.+.+|. ...+|+.|++++|
T Consensus 263 ~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~------ 317 (457)
T 3bz5_A 263 QT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN------ 317 (457)
T ss_dssp TC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC------
T ss_pred CC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc------
Confidence 33 23444555555544444 34455555555555555544442 2233444444433
Q ss_pred CccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCcc
Q 036011 462 PSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLT 541 (977)
Q Consensus 462 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 541 (977)
++|+.|++++|+|++. + +.++++|+.|++++|++++ ++.|..|++++|.+.|. +++.
T Consensus 318 -------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~ 374 (457)
T 3bz5_A 318 -------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTI 374 (457)
T ss_dssp -------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEE
T ss_pred -------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceee
Confidence 3455555555555542 1 4445555555555555543 12344444444444432 2333
Q ss_pred ccCeeeccCCccCCCCCc
Q 036011 542 GLESLDLSNNNLSGEIPK 559 (977)
Q Consensus 542 ~L~~L~Ls~N~l~~~~p~ 559 (977)
.|+.++|++|+++|.+|.
T Consensus 375 ~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 375 TMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp ECCCBCCBTTBEEEECCT
T ss_pred ecCccccccCcEEEEcCh
Confidence 344444444444444443
No 58
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.1e-41 Score=382.57 Aligned_cols=259 Identities=27% Similarity=0.423 Sum_probs=212.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|.+.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467888999999999999999986 78999999987553 3345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++|+|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999876666999999999999999999999 789999999999999999999999999999865432211
Q ss_pred ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
.......+++.|+|||++.++.++.++|||||||++|||++ |..||......+ ....+......
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~~~~~~~~~------------- 334 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TREFVEKGGRL------------- 334 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHHHHHTTCCC-------------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC-------------
Confidence 11112235778999999998899999999999999999998 999987643221 11111111000
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
+.+..++..+.+++.+||+.+|++|||++++++.|++++.
T Consensus 335 ----~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 ----PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 0011234567899999999999999999999999999874
No 59
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=8.3e-41 Score=369.73 Aligned_cols=260 Identities=28% Similarity=0.437 Sum_probs=211.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeC----CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS----DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
.++|++.+.||+|+||+||+|++. .+..||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356888999999999999999974 34569999997653 3445779999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999877667999999999999999999999 789999999999999999999999999999887543
Q ss_pred CCc-ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 837 DDS-VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 837 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
... .......+|+.|+|||++.+..++.++||||+|+++|||++ |..||......+ ....+......
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~~--------- 273 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEGYRL--------- 273 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTTCCC---------
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcCCCC---------
Confidence 322 22233456788999999998999999999999999999999 999996643221 11111111000
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhc
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKII 963 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~ 963 (977)
+....++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 274 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 274 --------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred --------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 00112345688999999999999999999999999998753
No 60
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.5e-41 Score=365.84 Aligned_cols=274 Identities=24% Similarity=0.396 Sum_probs=210.5
Q ss_pred hcCCCcCccccCcceEEEEEEEe-----CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeec--CCee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-----SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCN--NDFR 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 754 (977)
.++|++.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788999999999999999984 2689999999987766667889999999999999999999999855 3568
Q ss_pred EEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 755 ALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999887767999999999999999999999 7899999999999999999999999999998775
Q ss_pred CCCCc-ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchh-hhcc
Q 036011 835 EGDDS-VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLM-EVVD 912 (977)
Q Consensus 835 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 912 (977)
..... .......++..|+|||++.+..++.++||||+|+++|||++|..|+...... ...+.......... ....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHH
Confidence 43322 1222345777899999999999999999999999999999999998643111 11111110000000 0000
Q ss_pred hhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 913 TNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
..+ ......+.+..++..+.+++.+||+.+|++|||++|+++.|+++..
T Consensus 243 ~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 243 ELL-KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHH-HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH-hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 000 0000111122345678999999999999999999999999999874
No 61
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6e-40 Score=362.14 Aligned_cols=261 Identities=20% Similarity=0.278 Sum_probs=213.3
Q ss_pred CCCHHHHHHhhcC----------CCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCC
Q 036011 672 RTSYLDIQRATDG----------FNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRN 740 (977)
Q Consensus 672 ~~~~~~~~~~~~~----------~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n 740 (977)
.+++.+++.+++. |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4566666666653 666789999999999999976 79999999998766666678999999999999999
Q ss_pred cceEeeeeecCCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC
Q 036011 741 LIKIFSSCCNNDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM 820 (977)
Q Consensus 741 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~ 820 (977)
|+++++++...+..++||||+++|+|.+++... .+++..+..++.|+++||+||| +.||+||||||+||+++.++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCC
Confidence 999999999999999999999999999998754 3899999999999999999999 78999999999999999999
Q ss_pred ceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHH
Q 036011 821 VAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVK 900 (977)
Q Consensus 821 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 900 (977)
.+||+|||++........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .......
T Consensus 179 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~~~ 254 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLR 254 (321)
T ss_dssp CEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHH
T ss_pred cEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHh
Confidence 999999999987654322 223456999999999999999999999999999999999999999753221 1111111
Q ss_pred hhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 901 ESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
...+.. +. ....+...+.+++.+||+.||++|||+.|++++
T Consensus 255 ~~~~~~--------~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 255 DSPPPK--------LK-------NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HSSCCC--------CT-------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCCCC--------cC-------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111110 00 011123457899999999999999999999875
No 62
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.5e-41 Score=359.70 Aligned_cols=259 Identities=25% Similarity=0.378 Sum_probs=213.0
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
.++|++.+.||+|+||+||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 357888999999999999999988899999999975532 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcce
Q 036011 762 PNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVT 841 (977)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 841 (977)
++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....... ...
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccc
Confidence 999999999877777999999999999999999999 7899999999999999999999999999998764322 112
Q ss_pred eeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcccc
Q 036011 842 QTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEH 920 (977)
Q Consensus 842 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (977)
.....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ............ .+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--~~~~~~~~~~~~-----------~~- 229 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFRLY-----------KP- 229 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCCCC-----------CC-
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHhcCccCC-----------CC-
Confidence 223347788999999998999999999999999999999 999987532221 111111110000 00
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhcC
Q 036011 921 TSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKIIG 964 (977)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~~ 964 (977)
..+...+.+++.+||+.+|++||+++|++++|+++...|
T Consensus 230 -----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~g 268 (269)
T 4hcu_A 230 -----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 268 (269)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -----CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHcc
Confidence 012345789999999999999999999999999988543
No 63
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.8e-40 Score=357.05 Aligned_cols=257 Identities=25% Similarity=0.359 Sum_probs=213.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
.++|++.+.||+|+||+||+|+.+++..||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467889999999999999999998888999999975532 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcce
Q 036011 762 PNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVT 841 (977)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 841 (977)
++++|.+++......+++..++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++........ ..
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-EE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-hc
Confidence 999999999877667999999999999999999999 78999999999999999999999999999987654332 22
Q ss_pred eeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcccc
Q 036011 842 QTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEH 920 (977)
Q Consensus 842 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (977)
.....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+. .... ..... ...+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~-~~~~~-----------~~~~- 227 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-VLKV-SQGHR-----------LYRP- 227 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHH-HTTCC-----------CCCC-
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-HHHH-HcCCC-----------CCCC-
Confidence 233446778999999998899999999999999999999 9999875432211 1111 00000 0000
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 921 TSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
..++..+.+++.+||+.+|++|||+.|++++|++++.
T Consensus 228 -----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 228 -----HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp -----TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred -----CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 0123357899999999999999999999999999874
No 64
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.9e-40 Score=362.98 Aligned_cols=249 Identities=22% Similarity=0.317 Sum_probs=206.3
Q ss_pred hhcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
..++|++.+.||+|+||.||+|++ .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 356899999999999999999997 579999999997653 34456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++|+|.+++...+. +++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp ECCCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EECCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 999999999999976543 899999999999999999999 7899999999999999999999999999998765433
Q ss_pred CcceeeccccCCcccCccccCCCCcC-cccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVS-SKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
.....+||++|+|||++.+..++ .++||||+||++|||++|+.||.+....+. ..........
T Consensus 169 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~------------ 232 (328)
T 3fe3_A 169 ---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL-RERVLRGKYR------------ 232 (328)
T ss_dssp ---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCC------------
T ss_pred ---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCC------------
Confidence 23345799999999999888765 899999999999999999999976432111 1111110000
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.. ..+...+.+++.+|++.||.+|||+.|++++
T Consensus 233 ~p-------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 233 IP-------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CC-------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CC-------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 0123456889999999999999999999875
No 65
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.4e-40 Score=363.38 Aligned_cols=254 Identities=22% Similarity=0.334 Sum_probs=207.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch-hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD-RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999975 799999999875432 334678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++|+|.+++..... +++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTTB-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999999976543 899999999999999999999 789999999999999999999999999999876543333
Q ss_pred ceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||............|........
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~------------ 229 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN------------ 229 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTST------------
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCC------------
Confidence 33344579999999999887765 78999999999999999999999765444333444332211110
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
....+...+.+++.+|++.||++|||+.|++++
T Consensus 230 -----~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 -----PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 011223456889999999999999999999765
No 66
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2e-40 Score=373.34 Aligned_cols=259 Identities=27% Similarity=0.451 Sum_probs=200.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC----CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS----DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
.++|++.+.||+|+||+||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999864 57789999997653 3445679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.++++.....+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999887767999999999999999999999 789999999999999999999999999999877543
Q ss_pred CCc-ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 837 DDS-VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 837 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+.. .
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~~~i~~------------~ 266 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VIKAVDE------------G 266 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HHHHHHT------------T
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc------------C
Confidence 221 11222346788999999999999999999999999999998 999987543211 1111110 0
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.... ...+++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 267 ~~~~-----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 267 YRLP-----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp EECC-----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC-----CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 0000 011234568899999999999999999999999988764
No 67
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.4e-40 Score=358.16 Aligned_cols=261 Identities=25% Similarity=0.408 Sum_probs=205.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|.+.+.||+|+||+||+|+.. ..+|+|+++... ....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 467999999999999999999864 468999887532 344577999999999999999999999875 455789999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999999999877777999999999999999999999 789999999999999999999999999999876543333
Q ss_pred ceeeccccCCcccCccccC---CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 840 VTQTMTIATIGYMAPEYGT---EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
.......||+.|+|||++. +..++.++||||+||++|||++|+.||......+..................
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------ 262 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKL------ 262 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTS------
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhh------
Confidence 3334457999999999875 6678999999999999999999999997643322211111111111111000
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...++..+.+++.+||+.+|++||++.|+++.++.++.
T Consensus 263 --------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 263 --------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp --------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred --------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 01234568899999999999999999999999999885
No 68
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.1e-39 Score=355.00 Aligned_cols=265 Identities=25% Similarity=0.387 Sum_probs=207.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHh--cCCCCcceEeeeeec----CCeeE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRN--VRHRNLIKIFSSCCN----NDFRA 755 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~~~~ 755 (977)
.++|++.+.||+|+||+||+|+. +++.||||++.... ...+.+|.+++.. ++||||+++++++.+ ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999998 68999999987542 3445566666666 799999999998654 34578
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCceeeCCCCceEEeecccc
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHG-----HSTPVVHCDLKPSNILLDEDMVAHVSDFGLS 830 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 830 (977)
+||||+++|+|.++++.. .+++..+..++.|++.||+|||.. ++.+|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 489999999999999999999932 2678999999999999999999999999999
Q ss_pred cccCCCCCcce--eeccccCCcccCccccCCC------CcCcccchhhHhHHHHHHhcC----------CCCCCcCCccc
Q 036011 831 KLFDEGDDSVT--QTMTIATIGYMAPEYGTEG------IVSSKCDVYSYGVLLTETFTR----------KKPTDDMFTGE 892 (977)
Q Consensus 831 ~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~~~~~~ 892 (977)
+.......... .....||+.|+|||++.+. .++.++||||+||++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 87654433211 2234699999999998876 566899999999999999999 88887655444
Q ss_pred ccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHch
Q 036011 893 MSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKI 960 (977)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~ 960 (977)
................. .+ ........++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRP----NI----PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCC----CC----CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCC----CC----ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 44443333222111100 00 00111224567789999999999999999999999999876
No 69
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-40 Score=364.62 Aligned_cols=251 Identities=25% Similarity=0.317 Sum_probs=197.8
Q ss_pred hhcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
..++|++.+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457899999999999999999996 479999999987654 233467899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||++++++.+||+|||++........
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 9999999999997654 3899999999999999999999 78999999999999999999999999999986654322
Q ss_pred cceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
......+||+.|+|||++.+..+ +.++||||+||++|||++|..||.+....+ ........... .
T Consensus 164 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~------------~ 229 (347)
T 3zgw_A 164 -YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA-LYKKIMRGKYD------------V 229 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC------------C
T ss_pred -ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCC------------C
Confidence 22334569999999999988775 899999999999999999999997632211 11111111000 0
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. ..+...+.+++.+||+.||++|||++|++++
T Consensus 230 p-------~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 P-------KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp C-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred C-------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0 0123346789999999999999999999875
No 70
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=359.84 Aligned_cols=252 Identities=19% Similarity=0.305 Sum_probs=209.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
.++|++.+.||+|+||+||+|+.. +++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999975 68899999987543 3446688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC--CCceEEeecccccccCCCCC
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE--DMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~ 838 (977)
+++|+|.+++......+++..+..++.|+++||+||| +.||+||||||+||+++. ++.+||+|||++..+....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999877667999999999999999999999 789999999999999997 7899999999998876433
Q ss_pred cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
......||+.|+|||++.+..++.++||||+||++|||++|..||......+ ............
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~------------- 222 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAEYTF------------- 222 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCC-------------
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHHHHcCCCCC-------------
Confidence 2334569999999999999999999999999999999999999997642211 111111111110
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.......++..+.+++.+|++.||.+|||+.|++++
T Consensus 223 --~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 223 --DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001111234567899999999999999999999874
No 71
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2e-39 Score=356.42 Aligned_cols=268 Identities=23% Similarity=0.304 Sum_probs=206.5
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccch--hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLD--RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||+||+|+..+|+.||||++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 467999999999999999999998899999999875532 234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++ +|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9974 888888877667999999999999999999999 78999999999999999999999999999987654322
Q ss_pred ceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh---CCCchhhhcchhh
Q 036011 840 VTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES---LPHGLMEVVDTNL 915 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 915 (977)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+....... .+..+....+...
T Consensus 175 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 175 -SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred -cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccch
Confidence 2333568999999998876 568999999999999999999999997654332 222222211 1111111111000
Q ss_pred h--------ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 916 L--------RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 916 ~--------~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. ...........+...+.+++.+|++.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 0000000011233467899999999999999999999864
No 72
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.4e-40 Score=365.45 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=203.2
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCE----EEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTS----FAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
++|++.+.||+|+||+||+|++. +++. ||+|++.... ....+.+.+|++++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56889999999999999999864 4444 5788775433 344577999999999999999999999998755 779
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
|+||+.+|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999999887777999999999999999999999 789999999999999999999999999999987655
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
..........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ ............
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~~~~--------- 239 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGERLP--------- 239 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCCC---------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHHcCCCCC---------
Confidence 44444444567889999999999999999999999999999999 999997643322 222221111000
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
....+...+.+++.+||+.+|.+||++.|++++|+++..
T Consensus 240 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 240 --------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred --------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 001123457899999999999999999999999988753
No 73
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.2e-40 Score=368.43 Aligned_cols=268 Identities=26% Similarity=0.376 Sum_probs=216.0
Q ss_pred CHHHHHHhhcCCCcCccccCcceEEEEEEEe------CCCCEEEEEEeeccc-hhhHHHHHHHHHHHHhc-CCCCcceEe
Q 036011 674 SYLDIQRATDGFNECNLLGRGSFGSVYKGTF------SDGTSFAIKVFNLQL-DRAFRSFDSECEVLRNV-RHRNLIKIF 745 (977)
Q Consensus 674 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~ 745 (977)
...+.....++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3444455678899999999999999999973 246899999997653 34456799999999999 799999999
Q ss_pred eeeecCC-eeEEEEeccCCCCHHHHhhcCCc-------------------------------------------------
Q 036011 746 SSCCNND-FRALVLELMPNGSLEKWLYSDNY------------------------------------------------- 775 (977)
Q Consensus 746 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------- 775 (977)
+++.+.+ ..++||||+++|+|.++++....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9988755 48999999999999999976532
Q ss_pred ----------------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 776 ----------------FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 776 ----------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
.+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 2889999999999999999999 789999999999999999999999999999877654444
Q ss_pred ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
.......||+.|+|||++.+..++.++||||+||++|||++ |+.||......+. .............
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~~~~~~~~----------- 317 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEGTRMRA----------- 317 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHHHTCCCCC-----------
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHHcCCCCCC-----------
Confidence 44445678999999999999999999999999999999998 9999976433322 1111111111000
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
+..+...+.+++.+||+.+|++|||+.|++++|+++..
T Consensus 318 ------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 318 ------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp ------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 01123457899999999999999999999999998764
No 74
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.7e-38 Score=366.10 Aligned_cols=346 Identities=25% Similarity=0.354 Sum_probs=177.5
Q ss_pred CcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccce
Q 036011 72 NFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKW 151 (977)
Q Consensus 72 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 151 (977)
.+++|++|++++|.++. +| .+..+++|++|+|++|.+++ +|. ++.+++|++|+|++|.+++..| +.++++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCC-chh-hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 45667777777777665 44 36667777777777777763 333 6677777777777777764433 5666666666
Q ss_pred eccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCccc
Q 036011 152 DSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLS 231 (977)
Q Consensus 152 ~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 231 (977)
++++|.+++..+ ++++++|++|++++|++++ ++ .++++++|+.|+++ |.+.+.. .
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~------------------ 172 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--P------------------ 172 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--G------------------
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--h------------------
Confidence 666666554322 5666666666666666663 33 36666666666664 3333211 1
Q ss_pred ccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCC
Q 036011 232 GHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPT 311 (977)
Q Consensus 232 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 311 (977)
+..+++|++|++++|++++. ..+..+++|++|++++|++++..| ++.+++|+.|++++|.++.++
T Consensus 173 ---------~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-- 237 (466)
T 1o6v_A 173 ---------LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-- 237 (466)
T ss_dssp ---------GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG--
T ss_pred ---------hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccch--
Confidence 22344455555555554421 234555556666666665554433 444455555555555444321
Q ss_pred chhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCCh
Q 036011 312 AEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPS 391 (977)
Q Consensus 312 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 391 (977)
.+..+ ++|+.|++++|.+++..+
T Consensus 238 -------~l~~l-------------------------------------------------~~L~~L~l~~n~l~~~~~- 260 (466)
T 1o6v_A 238 -------TLASL-------------------------------------------------TNLTDLDLANNQISNLAP- 260 (466)
T ss_dssp -------GGGGC-------------------------------------------------TTCSEEECCSSCCCCCGG-
T ss_pred -------hhhcC-------------------------------------------------CCCCEEECCCCccccchh-
Confidence 12233 333344444443332222
Q ss_pred hhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccC
Q 036011 392 TVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYL 471 (977)
Q Consensus 392 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 471 (977)
+..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|
T Consensus 261 -~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 333 (466)
T 1o6v_A 261 -LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKL 333 (466)
T ss_dssp -GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTC
T ss_pred -hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccC
Confidence 4444455555555555543222 4444445555555555443322 4445555555555555554333 4444455
Q ss_pred ceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccc
Q 036011 472 LAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEG 531 (977)
Q Consensus 472 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 531 (977)
+.|++++|++++. ..+..+++|++|++++|++++..| +..+++|+.|++++|++++
T Consensus 334 ~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 334 QRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 5555555544432 234445555555555555554433 4455555555555555543
No 75
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.9e-39 Score=357.75 Aligned_cols=249 Identities=24% Similarity=0.276 Sum_probs=205.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||+||+|+.. +|+.||+|++++.. ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467899999999999999999975 69999999997653 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999987654 4899999999999999999999 7899999999999999999999999999998643322
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ........ ....
T Consensus 160 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~------------~~~~ 224 (337)
T 1o6l_A 160 A--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-LFELILME------------EIRF 224 (337)
T ss_dssp C--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHC------------CCCC
T ss_pred C--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH-HHHHHHcC------------CCCC
Confidence 1 2334579999999999999999999999999999999999999997532211 11111110 0000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRI-----YMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~ev~~~ 956 (977)
. ..+...+.+++.+|++.||++|| +++|++++
T Consensus 225 p-------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 P-------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C-------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0 01234578999999999999999 89998764
No 76
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.1e-40 Score=370.42 Aligned_cols=260 Identities=27% Similarity=0.411 Sum_probs=214.0
Q ss_pred hcCCCcCccccCcceEEEEEEEeC--------CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecC
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS--------DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNN 751 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 751 (977)
.++|.+.+.||+|+||+||+|+.. .++.||||++.... ......+.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467889999999999999999852 34679999997654 34457789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee
Q 036011 752 DFRALVLELMPNGSLEKWLYSDN---------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL 816 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 816 (977)
+..++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999998654 34899999999999999999999 7899999999999999
Q ss_pred CCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccH
Q 036011 817 DEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSL 895 (977)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 895 (977)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~~ 302 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--EL 302 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 9999999999999987765443333444567889999999999999999999999999999999 99998754221 11
Q ss_pred HHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhc
Q 036011 896 KKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKII 963 (977)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~ 963 (977)
.+.+....... . ...+...+.+++.+||+.+|++|||++|+++.|+++...
T Consensus 303 ~~~~~~~~~~~-----------~------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 303 FKLLKEGHRMD-----------K------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp HHHHHTTCCCC-----------C------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCC-----------C------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111000 0 012344578999999999999999999999999998753
No 77
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.5e-40 Score=356.05 Aligned_cols=261 Identities=21% Similarity=0.363 Sum_probs=207.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999964 68999999986442 34457789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++|+|.+++...+ .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999997654 4899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
. .......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+... +......+. ...
T Consensus 166 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~~~~~~~-~~~-------- 234 (294)
T 4eqm_A 166 L-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI-KHIQDSVPN-VTT-------- 234 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH-HHHSSCCCC-HHH--------
T ss_pred c-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhhccCCC-cch--------
Confidence 2 12233569999999999999999999999999999999999999997643221111 111110010 000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHHHchhh
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRI-YMTDAAVKLKKIKI 962 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~ev~~~L~~~~~ 962 (977)
....+++..+.+++.+|++.||.+|| +++++.+.|+++..
T Consensus 235 -----~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 235 -----DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp -----HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred -----hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 00012345678999999999999999 99999999988764
No 78
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.7e-39 Score=361.34 Aligned_cols=253 Identities=23% Similarity=0.304 Sum_probs=207.0
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchh------hHHHHHHHHHHHHhcCCCCcceEeeeeecCCe
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDR------AFRSFDSECEVLRNVRHRNLIKIFSSCCNNDF 753 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 753 (977)
..+.|++.+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3467999999999999999999975 6999999999765422 24678999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC----ceEEeeccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM----VAHVSDFGL 829 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfgl 829 (977)
.++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 999999999999999997654 4899999999999999999999 78999999999999998777 799999999
Q ss_pred ccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhh
Q 036011 830 SKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLME 909 (977)
Q Consensus 830 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (977)
+........ ....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+....+ .........+.
T Consensus 166 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~-~~~~i~~~~~~----- 236 (361)
T 2yab_A 166 AHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANITAVSYD----- 236 (361)
T ss_dssp CEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTCCC-----
T ss_pred ceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCC-----
Confidence 987754322 233569999999999999999999999999999999999999997642211 11111111000
Q ss_pred hcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 910 VVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+ ..........+.+++.+|++.||.+|||+.|++++
T Consensus 237 -~~---------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 237 -FD---------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -CC---------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -CC---------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 01111234457899999999999999999999753
No 79
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-38 Score=367.78 Aligned_cols=367 Identities=21% Similarity=0.210 Sum_probs=272.3
Q ss_pred CCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceecccccccccc
Q 036011 83 KNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNI 162 (977)
Q Consensus 83 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~ 162 (977)
.....+..+..++++++|++|+|++|.+++ +| .++.+++|++|+|++|++++. | ++.+++|++|++++|.+++.
T Consensus 27 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~- 100 (457)
T 3bz5_A 27 AFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL- 100 (457)
T ss_dssp HTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-
T ss_pred hcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-
Confidence 334444445567777777777777777774 45 577777777777777777753 2 55666666666666666542
Q ss_pred CccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCcccc
Q 036011 163 PSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSY 242 (977)
Q Consensus 163 p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 242 (977)
| ++++++|++|++++|++++ +| ++++++|++|++++|++++. + +.
T Consensus 101 ~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---------------------------~---l~ 145 (457)
T 3bz5_A 101 D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---------------------------D---VS 145 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---------------------------C---CT
T ss_pred e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---------------------------c---cc
Confidence 2 5555666666666666553 33 55555555555555555431 1 33
Q ss_pred CCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhccccc
Q 036011 243 SLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTN 322 (977)
Q Consensus 243 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~ 322 (977)
.+++|++|++++|+..+.+ .+..+++|++|++++|+++++ | +..+++|+.|++++|.++.++ +..
T Consensus 146 ~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~~----------l~~ 210 (457)
T 3bz5_A 146 HNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKLD----------LNQ 210 (457)
T ss_dssp TCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCCC----------CTT
T ss_pred cCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCeec----------ccc
Confidence 5667777777777544444 477889999999999999875 4 888899999999999988752 667
Q ss_pred CCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEE
Q 036011 323 CRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGL 402 (977)
Q Consensus 323 l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 402 (977)
+++|+.|++++|++++ +| +..+++|+.|++++|++++.. ++.+++|+.|
T Consensus 211 l~~L~~L~Ls~N~l~~--------------------------ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L 259 (457)
T 3bz5_A 211 NIQLTFLDCSSNKLTE--------------------------ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTL 259 (457)
T ss_dssp CTTCSEEECCSSCCSC--------------------------CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEE
T ss_pred CCCCCEEECcCCcccc--------------------------cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEE
Confidence 7888888888887764 22 557788999999999998654 4567888999
Q ss_pred EeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCC
Q 036011 403 SLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLS 482 (977)
Q Consensus 403 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 482 (977)
++++|+ |+.|++++|++.+.+| ++.+++|+.|++++|.+.+.+|. ...+|+.|++++|
T Consensus 260 ~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~--- 317 (457)
T 3bz5_A 260 HCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN--- 317 (457)
T ss_dssp ECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC---
T ss_pred eccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc---
Confidence 887764 5678899999888887 57889999999999998877764 3455666665554
Q ss_pred CCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccc
Q 036011 483 GSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLE 562 (977)
Q Consensus 483 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 562 (977)
++|++|++++|++++ ++ ++.+++|+.|++++|+|++ ++.|+.|++++|+++|. .
T Consensus 318 ----------~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~ 371 (457)
T 3bz5_A 318 ----------PKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----G 371 (457)
T ss_dssp ----------TTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----E
T ss_pred ----------ccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----c
Confidence 689999999999997 43 8999999999999999996 35688889999999976 4
Q ss_pred cccccCccccCCCcccccCCCC
Q 036011 563 ALLFLKQLNVSHNKLEGEIPAN 584 (977)
Q Consensus 563 ~l~~L~~L~l~~N~l~~~~p~~ 584 (977)
.+..|..+++++|+++|.||..
T Consensus 372 ~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 372 QTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp EEEECCCBCCBTTBEEEECCTT
T ss_pred eeeecCccccccCcEEEEcChh
Confidence 6678899999999999999963
No 80
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=372.52 Aligned_cols=258 Identities=24% Similarity=0.374 Sum_probs=209.2
Q ss_pred cCCCcCccccCcceEEEEEEEeC------CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS------DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRA 755 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 755 (977)
++|++.+.||+|+||+||+|++. +++.||||+++... ......+.+|+.++++++||||+++++++.+....+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888999999999999999853 46789999987543 344567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCC------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC---ceEEee
Q 036011 756 LVLELMPNGSLEKWLYSDN------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM---VAHVSD 826 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~D 826 (977)
+||||+++|+|.+++.... ..+++..++.++.||++||+||| +.||+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999997643 35899999999999999999999 78999999999999999555 599999
Q ss_pred cccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCC
Q 036011 827 FGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPH 905 (977)
Q Consensus 827 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 905 (977)
||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||......+ ....+......
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--~~~~i~~~~~~ 305 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGRM 305 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHTTCCC
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC
Confidence 999986643333333334568999999999998999999999999999999998 999987642211 11111111000
Q ss_pred chhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 906 GLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
. ....++..+.+++.+||+.+|++|||+.|++++|+.+..
T Consensus 306 -----------~------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 306 -----------D------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp -----------C------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----------C------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 0 011233457899999999999999999999999988775
No 81
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.1e-40 Score=355.90 Aligned_cols=256 Identities=24% Similarity=0.353 Sum_probs=208.3
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
.++|++.+.||+|+||+||+|++.++..||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 467888999999999999999998888999999975532 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcce
Q 036011 762 PNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVT 841 (977)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 841 (977)
++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~ 177 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TS 177 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-HS
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccc-cc
Confidence 999999999876666999999999999999999999 78999999999999999999999999999987643221 11
Q ss_pred eeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcccc
Q 036011 842 QTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEH 920 (977)
Q Consensus 842 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (977)
.....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....+....... .+
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~~~~~-----------~~- 243 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEHIAQGLRLY-----------RP- 243 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHTTCCCC-----------CC-
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--HHHHHhcccCCC-----------CC-
Confidence 222346788999999998899999999999999999998 999997643221 111111100000 00
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 921 TSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
..+...+.+++.+||+.+|++|||++|++++|+++.
T Consensus 244 -----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 244 -----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp -----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 011345789999999999999999999999998876
No 82
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.2e-39 Score=352.55 Aligned_cols=260 Identities=26% Similarity=0.415 Sum_probs=198.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||+||+|+.. ..||||++.... ....+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467999999999999999999864 469999987553 34557799999999999999999999965 4566889999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999877777999999999999999999999 789999999999999999999999999999876543333
Q ss_pred ceeeccccCCcccCccccC---CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 840 VTQTMTIATIGYMAPEYGT---EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
.......||+.|+|||++. +..++.++||||+|+++|||++|+.||......+..................
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 250 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV------ 250 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSS------
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhc------
Confidence 3334456999999999886 6678999999999999999999999997643332211111111111111100
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
...++..+.+++.+||+.+|.+|||+.|+++.|+++.
T Consensus 251 --------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 251 --------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp --------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred --------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 0123456889999999999999999999999999875
No 83
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6e-40 Score=366.61 Aligned_cols=260 Identities=26% Similarity=0.395 Sum_probs=212.4
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC------CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCe
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS------DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDF 753 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 753 (977)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999874 34889999997653 3445779999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCC-----------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 036011 754 RALVLELMPNGSLEKWLYSDN-----------------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLK 810 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk 810 (977)
.++||||+++|+|.+++.... ..+++..++.++.||++||+||| +.+|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 999999999999999997642 45899999999999999999999 7899999999
Q ss_pred CCceeeCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCC
Q 036011 811 PSNILLDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMF 889 (977)
Q Consensus 811 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~ 889 (977)
|+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |..||.+..
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999987654332223334568899999999988899999999999999999999 999997643
Q ss_pred cccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 890 TGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
..+ ....+... ..... +..++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 282 ~~~--~~~~~~~~-----------~~~~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 282 HEE--VIYYVRDG-----------NILAC------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp HHH--HHHHHHTT-----------CCCCC------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hHH--HHHHHhCC-----------CcCCC------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 211 11111110 00000 01234467899999999999999999999999998873
No 84
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-39 Score=359.85 Aligned_cols=258 Identities=28% Similarity=0.421 Sum_probs=212.9
Q ss_pred hcCCCcCccccCcceEEEEEEEe------CCCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF------SDGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFR 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 754 (977)
.++|.+.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788999999999999999985 245889999997553 34457789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCC-----------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCC
Q 036011 755 ALVLELMPNGSLEKWLYSDN-----------------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKP 811 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~ 811 (977)
++||||+++|+|.+++.... ..+++..++.++.||++||+||| +.+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999998643 23789999999999999999999 78999999999
Q ss_pred CceeeCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCc
Q 036011 812 SNILLDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFT 890 (977)
Q Consensus 812 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 890 (977)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |..||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987765443333334457889999999998899999999999999999999 9999976433
Q ss_pred ccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 891 GEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
.+ ............ ....++..+.+++.+||+.||++||++.|++++|+++.
T Consensus 259 ~~--~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 259 ER--LFNLLKTGHRME-----------------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp GG--HHHHHHTTCCCC-----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH--HHHHhhcCCcCC-----------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22 222211111000 00123446789999999999999999999999999875
No 85
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=353.58 Aligned_cols=279 Identities=21% Similarity=0.263 Sum_probs=214.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC--eeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND--FRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 757 (977)
.++|.+.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357899999999999999999976 59999999997543 334567889999999999999999999987755 77999
Q ss_pred EeccCCCCHHHHhhcCCc--cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee----CCCCceEEeeccccc
Q 036011 758 LELMPNGSLEKWLYSDNY--FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL----DEDMVAHVSDFGLSK 831 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Dfgla~ 831 (977)
|||+++|+|.+++..... .+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999986543 3899999999999999999999 7899999999999999 888899999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccC--------CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccH---HHHHH
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGT--------EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSL---KKWVK 900 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~---~~~~~ 900 (977)
....... .....||+.|+|||++. +..++.++||||+||++|||++|+.||.......... .....
T Consensus 165 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 7755432 22346999999999875 5789999999999999999999999997543332222 22222
Q ss_pred hhCCCchhhhc---chhhhc---cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhcCcc
Q 036011 901 ESLPHGLMEVV---DTNLLR---QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKIIGVL 966 (977)
Q Consensus 901 ~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~~~~ 966 (977)
...+..+..+. ...+.. .+............+.+++.+|++.||++|||++|++++.......|..
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~~~ 313 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRGNS 313 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC----
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcCCc
Confidence 22211111110 000000 0011122245667788999999999999999999999999877765543
No 86
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.5e-39 Score=349.15 Aligned_cols=253 Identities=26% Similarity=0.436 Sum_probs=205.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchh-------hHHHHHHHHHHHHhcCCCCcceEeeeeecCCe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDR-------AFRSFDSECEVLRNVRHRNLIKIFSSCCNNDF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 753 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367899999999999999999974 7999999998654321 1267899999999999999999999987665
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCceeeCCCCc-----eEEee
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTP--VVHCDLKPSNILLDEDMV-----AHVSD 826 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~~~~~-----~kl~D 826 (977)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+ |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999999877777999999999999999999999 788 999999999999988776 99999
Q ss_pred cccccccCCCCCcceeeccccCCcccCcccc--CCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCC
Q 036011 827 FGLSKLFDEGDDSVTQTMTIATIGYMAPEYG--TEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLP 904 (977)
Q Consensus 827 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (977)
||+++.... ......||+.|+|||++ ....++.++||||+|+++|||++|+.||...................
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 247 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC
T ss_pred CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC
Confidence 999985433 22335699999999998 45668999999999999999999999997654433322222211110
Q ss_pred CchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHch
Q 036011 905 HGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKI 960 (977)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~ 960 (977)
.. .....++..+.+++.+||+.||++|||++|+++.|+++
T Consensus 248 ~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 RP----------------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CC----------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CC----------------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 00 00012344678999999999999999999999999864
No 87
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.2e-39 Score=372.04 Aligned_cols=263 Identities=21% Similarity=0.256 Sum_probs=210.0
Q ss_pred HHHHHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeec
Q 036011 675 YLDIQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN 750 (977)
Q Consensus 675 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 750 (977)
+.++....++|++.++||+|+||+||+|+.+ +++.||||++.+.. ......+.+|+.+++.++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455566789999999999999999999976 58899999997543 2223448899999999999999999999999
Q ss_pred CCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccc
Q 036011 751 NDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLS 830 (977)
Q Consensus 751 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 830 (977)
.+..++||||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999999876566999999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCcceeeccccCCcccCccccC-----CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCC
Q 036011 831 KLFDEGDDSVTQTMTIATIGYMAPEYGT-----EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPH 905 (977)
Q Consensus 831 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (977)
+....... ......+||++|+|||++. .+.++.++||||+||++|||++|+.||......+ ..........
T Consensus 223 ~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~-- 298 (437)
T 4aw2_A 223 LKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNHKE-- 298 (437)
T ss_dssp EECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHHH--
T ss_pred hhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-HHHhhhhccc--
Confidence 87654332 2233457999999999986 5679999999999999999999999997643221 1111111000
Q ss_pred chhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 036011 906 GLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQ--RIYMTDAAVK 956 (977)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~ev~~~ 956 (977)
.+..... ...+...+.+++.+|++.+|++ ||+++|++++
T Consensus 299 --------~~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 299 --------RFQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --------HCCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --------cccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0000000 0012335688999999888888 9999999764
No 88
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=355.39 Aligned_cols=251 Identities=23% Similarity=0.313 Sum_probs=205.7
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchh------hHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDR------AFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRA 755 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 755 (977)
+.|++.+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 56889999999999999999975 6899999998765321 3567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC----ceEEeeccccc
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM----VAHVSDFGLSK 831 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfgla~ 831 (977)
+||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999997654 4899999999999999999999 78999999999999999887 89999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhc
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVV 911 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (977)
....... .....||+.|+|||++.+..++.++||||+||++|||++|..||......+ ............
T Consensus 167 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~~------ 236 (326)
T 2y0a_A 167 KIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANVSAVNYEF------ 236 (326)
T ss_dssp ECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHTCCCC------
T ss_pred ECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHhcCCCc------
Confidence 7754322 233469999999999999999999999999999999999999997542211 111111110000
Q ss_pred chhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 912 DTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.......+...+.+++.+||+.||++|||+.|++++
T Consensus 237 ---------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 237 ---------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ---------CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---------CccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000111234457899999999999999999999874
No 89
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.4e-39 Score=360.27 Aligned_cols=263 Identities=25% Similarity=0.420 Sum_probs=195.7
Q ss_pred hhcCCCcCccccCcceEEEEEEEeCC-C---CEEEEEEeecc--chhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCee
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFSD-G---TSFAIKVFNLQ--LDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFR 754 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 754 (977)
..++|++.+.||+|+||+||+|+... + ..||||++... .....+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34679999999999999999998753 3 27999998765 244567899999999999999999999999877655
Q ss_pred ------EEEEeccCCCCHHHHhhcCC-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceE
Q 036011 755 ------ALVLELMPNGSLEKWLYSDN-----YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAH 823 (977)
Q Consensus 755 ------~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 823 (977)
++||||+++|+|.+++.... ..+++..+..++.|+++||+||| +.||+||||||+||++++++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 89999999999999986432 14899999999999999999999 78999999999999999999999
Q ss_pred EeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhh
Q 036011 824 VSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKES 902 (977)
Q Consensus 824 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 902 (977)
|+|||+++...............+++.|+|||++.+..++.++||||+||++|||++ |..||......+ ........
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~ 255 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--IYNYLIGG 255 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTT
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--HHHHHhcC
Confidence 999999987755443333334457889999999999999999999999999999999 899987643322 11111110
Q ss_pred CCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhcCc
Q 036011 903 LPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKIIGV 965 (977)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~~~ 965 (977)
.. ... ...++..+.+++.+||+.||++|||+.|+++.|+++....+
T Consensus 256 ~~-----------~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 256 NR-----------LKQ------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp CC-----------CCC------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred CC-----------CCC------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 00 000 01223457899999999999999999999999998875443
No 90
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=6.5e-40 Score=362.99 Aligned_cols=257 Identities=24% Similarity=0.374 Sum_probs=205.9
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCE----EEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTS----FAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
++|++.+.||+|+||+||+|++. +++. ||+|++.... ......+.+|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57889999999999999999864 4544 7788775433 233456788999999999999999999986 456889
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++......+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++.+...
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999887667999999999999999999999 789999999999999999999999999999987655
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
..........+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+ .............
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~~~~-------- 238 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLEKGERLAQ-------- 238 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHHTTCBCCC--------
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCCCCC--------
Confidence 44444455568889999999998999999999999999999999 999997643322 1121111100000
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
+ ..+...+.+++.+||+.+|.+||++.|++++|+++..
T Consensus 239 ---~------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 239 ---P------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---C------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---C------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 0112246789999999999999999999999988764
No 91
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=349.98 Aligned_cols=253 Identities=26% Similarity=0.400 Sum_probs=199.8
Q ss_pred cCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEeccC
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELMP 762 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 762 (977)
++|++.+.||+|+||+||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 56888999999999999999984 789999998643 345678999999999999999999999874 4789999999
Q ss_pred CCCHHHHhhcCCc--cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc-eEEeecccccccCCCCCc
Q 036011 763 NGSLEKWLYSDNY--FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV-AHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 763 ~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~-~kl~Dfgla~~~~~~~~~ 839 (977)
+|+|.+++..... .+++..++.++.|+++||+|||+.+..||+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999986553 4789999999999999999999555489999999999999998886 799999999765432
Q ss_pred ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQE 919 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (977)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..................... .
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------~---- 225 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP--------L---- 225 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCC--------C----
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCC--------c----
Confidence 12235999999999999999999999999999999999999999764332211111111100000 0
Q ss_pred cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 920 HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...++..+.+++.+||+.+|++|||++|+++.|+++..
T Consensus 226 -----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 226 -----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp -----BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred -----ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 01123457899999999999999999999999998764
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=368.29 Aligned_cols=255 Identities=21% Similarity=0.290 Sum_probs=206.4
Q ss_pred HhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
+..++|++.+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 34577999999999999999999864 78999999987653 3445678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeC---CCCceEEeeccccccc
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLD---EDMVAHVSDFGLSKLF 833 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~Dfgla~~~ 833 (977)
||||+++|+|.+++..... +++..+..++.||+.||+||| +.||+||||||+||+++ .++.+||+|||++...
T Consensus 88 v~E~~~gg~L~~~i~~~~~-~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999987654 899999999999999999999 78999999999999998 5678999999999876
Q ss_pred CCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcch
Q 036011 834 DEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDT 913 (977)
Q Consensus 834 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (977)
..... ......||++|+|||++.+..++.++||||+||++|+|++|..||.+....+ .............
T Consensus 164 ~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~------- 233 (444)
T 3soa_A 164 EGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-LYQQIKAGAYDFP------- 233 (444)
T ss_dssp CTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCCC-------
T ss_pred cCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhCCCCCC-------
Confidence 54322 2233569999999999999999999999999999999999999996532211 1111111111000
Q ss_pred hhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 914 NLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+....+...+.+++.+|++.||++|||+.|++++
T Consensus 234 --------~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 234 --------SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp --------TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --------ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00111233457899999999999999999999874
No 93
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-39 Score=362.62 Aligned_cols=253 Identities=22% Similarity=0.298 Sum_probs=209.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
.++|++.+.||+|+||+||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999975 6899999999876555567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC--CCceEEeecccccccCCCCC
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE--DMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~ 838 (977)
+++|+|.+++......+++..+..++.||+.||+||| +.||+||||||+||+++. ++.+||+|||+++.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999877667999999999999999999999 789999999999999974 57899999999988754322
Q ss_pred cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
.....||+.|+|||++.+..++.++||||+||++|||++|..||.+.... ..+.......... +.
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~~------~~----- 271 (387)
T 1kob_A 207 ---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCDWEF------DE----- 271 (387)
T ss_dssp ---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCCCCC------CS-----
T ss_pred ---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCC------Cc-----
Confidence 23346999999999999999999999999999999999999999764221 1111111111000 00
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.....+...+.+++.+||+.||++|||+.|++++
T Consensus 272 ----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 ----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0001223457899999999999999999999875
No 94
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-39 Score=358.69 Aligned_cols=260 Identities=23% Similarity=0.352 Sum_probs=211.5
Q ss_pred hcCCCcCccccCcceEEEEEEEe------CCCCEEEEEEeeccc-hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF------SDGTSFAIKVFNLQL-DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 753 (977)
.++|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46789999999999999999986 246689999997543 33456789999999999 89999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCCc----------------------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCC
Q 036011 754 RALVLELMPNGSLEKWLYSDNY----------------------FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKP 811 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~ 811 (977)
.++||||+++|+|.+++..... .+++..++.++.||+.||+||| +.||+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence 9999999999999999986542 3789999999999999999999 78999999999
Q ss_pred CceeeCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCc
Q 036011 812 SNILLDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFT 890 (977)
Q Consensus 812 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 890 (977)
+||+++.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||+| |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999999987765444333444568889999999988899999999999999999998 9999976533
Q ss_pred ccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 891 GEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.. ............. . +..++..+.+++.+||+.||.+|||+.|++++|+.+..
T Consensus 281 ~~-~~~~~~~~~~~~~-----------~------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 281 DA-NFYKLIQNGFKMD-----------Q------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp SH-HHHHHHHTTCCCC-----------C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HH-HHHHHHhcCCCCC-----------C------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 22 1222222111100 0 01123457899999999999999999999999998774
No 95
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.4e-39 Score=349.47 Aligned_cols=268 Identities=20% Similarity=0.249 Sum_probs=205.0
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999975 68999999997553 3345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++ ++.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9975 666666665556999999999999999999999 78999999999999999999999999999987653322
Q ss_pred ceeeccccCCcccCccccCCCC-cCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCC---Cchhhhcch-h
Q 036011 840 VTQTMTIATIGYMAPEYGTEGI-VSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLP---HGLMEVVDT-N 914 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~ 914 (977)
......||+.|+|||++.+.. ++.++||||+||++|||++|..||.........+......... ..+...... .
T Consensus 157 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp -CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred -cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 223456899999999987765 8999999999999999999998865433333333332221111 001000000 0
Q ss_pred hhc------cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 915 LLR------QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 915 ~~~------~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
... ..........+...+.+++.+|++.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 000000011234457899999999999999999999864
No 96
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.3e-39 Score=359.87 Aligned_cols=252 Identities=20% Similarity=0.291 Sum_probs=203.8
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch-----hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD-----RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
+.|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56889999999999999999865 699999999875431 135678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcC---CccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc---eEEeecccc
Q 036011 757 VLELMPNGSLEKWLYSD---NYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV---AHVSDFGLS 830 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfgla 830 (977)
||||+++|+|.+++... ...+++..+..++.||++||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998887643 234899999999999999999999 789999999999999986654 999999999
Q ss_pred cccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhh
Q 036011 831 KLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEV 910 (977)
Q Consensus 831 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (977)
........ .....+||+.|+|||++.+..++.++||||+||++|||++|+.||.... +..............
T Consensus 181 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~~~~~~---- 252 (351)
T 3c0i_A 181 IQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMN---- 252 (351)
T ss_dssp EECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHTCCCCC----
T ss_pred eEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcCCCCCC----
Confidence 87754322 2234569999999999999999999999999999999999999997631 111111111111000
Q ss_pred cchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 911 VDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
......+...+.+++.+||+.||++|||+.|++++
T Consensus 253 -----------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 253 -----------PRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp -----------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00111234567899999999999999999999763
No 97
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.1e-39 Score=373.14 Aligned_cols=251 Identities=28% Similarity=0.412 Sum_probs=207.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC-eeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND-FRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 760 (977)
.++|++.+.||+|+||+||+|++. |+.||||+++... ..+.|.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 467888999999999999999985 7899999997543 4567999999999999999999999987655 78999999
Q ss_pred cCCCCHHHHhhcCCc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 761 MPNGSLEKWLYSDNY-FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
+++|+|.+++...+. .+++..+..++.||++||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 999999999986543 4699999999999999999999 7899999999999999999999999999998643221
Q ss_pred ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 344 ---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~-------------- 404 (450)
T 1k9a_A 344 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYK-------------- 404 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTTCC--------------
T ss_pred ---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--------------
Confidence 12357889999999999999999999999999999998 999997653322 1111111000
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...+..++..+.+++.+||+.+|++|||+.++++.|++++.
T Consensus 405 ---~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 405 ---MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 00011245568899999999999999999999999999875
No 98
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.9e-39 Score=362.59 Aligned_cols=268 Identities=15% Similarity=0.171 Sum_probs=208.5
Q ss_pred hhcCCCcCccccCcceEEEEEEEeCC------CCEEEEEEeeccchhh-----------HHHHHHHHHHHHhcCCCCcce
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFSD------GTSFAIKVFNLQLDRA-----------FRSFDSECEVLRNVRHRNLIK 743 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~ 743 (977)
..++|++.+.||+|+||+||+|++.. ++.||||++....... ...+.+|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34689999999999999999998754 4789999987653211 122445666778889999999
Q ss_pred EeeeeecC----CeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeC--
Q 036011 744 IFSSCCNN----DFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLD-- 817 (977)
Q Consensus 744 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-- 817 (977)
+++++... ...++||||+ +++|.+++......+++..+..++.||+.||+||| +.+|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 99998764 4579999999 99999999887667999999999999999999999 78999999999999999
Q ss_pred CCCceEEeecccccccCCCCCcc-----eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCccc
Q 036011 818 EDMVAHVSDFGLSKLFDEGDDSV-----TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGE 892 (977)
Q Consensus 818 ~~~~~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 892 (977)
.++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||.+.....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 88999999999998765432111 1123459999999999999999999999999999999999999998643322
Q ss_pred ccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 893 MSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
....+........+.++.++.+.. ..++..+.+++..||+.+|++||++.++++.|+++.
T Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 269 -KYVRDSKIRYRENIASLMDKCFPA--------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp -HHHHHHHHHHHHCHHHHHHHHSCT--------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhhhhHHHHHHHhccc--------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 222222222222233333322211 122456889999999999999999999999997764
No 99
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=360.88 Aligned_cols=249 Identities=23% Similarity=0.293 Sum_probs=199.7
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRA 755 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 755 (977)
..++|++.+.||+|+||+||+|+.+ +|+.||||++.+.. ....+.+.+|.++++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3478999999999999999999975 68999999998653 33456678999999988 6999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCC
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 835 (977)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999997654 3899999999999999999999 78999999999999999999999999999986433
Q ss_pred CCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 836 GDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 836 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ........ ..
T Consensus 177 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~------------~~ 241 (353)
T 3txo_A 177 NG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAILND------------EV 241 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHC------------CC
T ss_pred CC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHHHHHcC------------CC
Confidence 22 22334579999999999999899999999999999999999999997643221 11111111 00
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCH------HHHHH
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYM------TDAAV 955 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~ev~~ 955 (977)
.... .....+.+++.+|++.+|++||++ .|+++
T Consensus 242 ~~p~-------~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 VYPT-------WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCCT-------TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCC-------CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0000 123346889999999999999998 66654
No 100
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-38 Score=351.96 Aligned_cols=267 Identities=25% Similarity=0.389 Sum_probs=206.3
Q ss_pred HHhhcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhc--CCCCcceEeeeeecC----C
Q 036011 679 QRATDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNV--RHRNLIKIFSSCCNN----D 752 (977)
Q Consensus 679 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~----~ 752 (977)
....++|++.+.||+|+||+||+|+.. ++.||||++.... ...+.+|.+++... +||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 344578999999999999999999985 8999999986442 23344555555554 899999999999877 6
Q ss_pred eeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCC--------CeEeCCCCCCceeeCCCCceEE
Q 036011 753 FRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHST--------PVVHCDLKPSNILLDEDMVAHV 824 (977)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~--------~ivH~dlk~~NIll~~~~~~kl 824 (977)
..++||||+++|+|.++++... +++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred ceEEEEeccCCCcHHHHhhccC--CCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 8899999999999999997654 899999999999999999999 55 9999999999999999999999
Q ss_pred eecccccccCCCCCcc--eeeccccCCcccCccccCCCCcCcc------cchhhHhHHHHHHhcC----------CCCCC
Q 036011 825 SDFGLSKLFDEGDDSV--TQTMTIATIGYMAPEYGTEGIVSSK------CDVYSYGVLLTETFTR----------KKPTD 886 (977)
Q Consensus 825 ~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslG~il~elltg----------~~p~~ 886 (977)
+|||+++.+....... ......||+.|+|||++.+..++.+ +|||||||++|||+|| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 9999998765433221 1123469999999999887766655 9999999999999999 66665
Q ss_pred cCCcccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 887 DMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...........+........... .........+++..+.+++.+||+.||++|||+.|++++|+++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCIKKLRP--------SFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCC--------CCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCCCchhhhHHHHhhhccCc--------cccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 54443333333322221111110 011111123567789999999999999999999999999999874
No 101
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.1e-38 Score=348.95 Aligned_cols=261 Identities=15% Similarity=0.126 Sum_probs=212.5
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||+||+|+. .+|+.||||++.... ..+.+.+|+++++.+ +|++++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999996 479999999986543 335688999999999 79999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc-----eEEeecccccccC
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV-----AHVSDFGLSKLFD 834 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~Dfgla~~~~ 834 (977)
|+ +++|.+++...+..+++..+..++.||++||+||| +.||+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999877667999999999999999999999 899999999999999987776 9999999998776
Q ss_pred CCCCc-----ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc--cHHHHHHhhCCCch
Q 036011 835 EGDDS-----VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM--SLKKWVKESLPHGL 907 (977)
Q Consensus 835 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~ 907 (977)
..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ..............
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 54321 122345699999999999999999999999999999999999999976432211 11111110000000
Q ss_pred hhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 908 MEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
. .....++..+.+++.+||+.+|++||+++++++.|+++..
T Consensus 243 ~--------------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 243 R--------------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp H--------------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred H--------------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 0 0011234568899999999999999999999999988764
No 102
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.4e-39 Score=359.48 Aligned_cols=252 Identities=23% Similarity=0.347 Sum_probs=205.7
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999975 68999999997553 344567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCC---CceEEeecccccccCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDED---MVAHVSDFGLSKLFDE 835 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfgla~~~~~ 835 (977)
||+++|+|.+++.... .+++..+..++.||++||+||| +.||+||||||+||+++.+ +.+||+|||++.....
T Consensus 108 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999987654 4899999999999999999999 7899999999999999865 4599999999987754
Q ss_pred CCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 836 GDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 836 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
... .....||+.|+|||++.+..++.++||||+||++|+|++|..||.+....+ ............
T Consensus 184 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-~~~~i~~~~~~~---------- 249 (362)
T 2bdw_A 184 SEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDY---------- 249 (362)
T ss_dssp CCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCC----------
T ss_pred Ccc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCC----------
Confidence 322 233569999999999999999999999999999999999999997532211 111111111100
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.......+...+.+++.+||+.||++||++.|++++
T Consensus 250 -----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 -----PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -----CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -----CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001111234457899999999999999999999765
No 103
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5e-39 Score=356.76 Aligned_cols=260 Identities=17% Similarity=0.164 Sum_probs=210.3
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46799999999999999999996 4789999999875432 35688999999999 99999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc-----eEEeecccccccC
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV-----AHVSDFGLSKLFD 834 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~Dfgla~~~~ 834 (977)
|+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++.+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 99999999876667999999999999999999999 789999999999999998887 9999999999765
Q ss_pred CCCCcc-----eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc--cHHHHHHhhCCCch
Q 036011 835 EGDDSV-----TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM--SLKKWVKESLPHGL 907 (977)
Q Consensus 835 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~ 907 (977)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+..+.....+...
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 241 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 241 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence 433211 12345799999999999999999999999999999999999999986532211 01111110000000
Q ss_pred hhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 908 MEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
. .....++ .+.+++.+||+.+|.+||+++++.+.|+++..
T Consensus 242 ~--------------~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 242 E--------------VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp H--------------HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred H--------------HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 0 0000123 68899999999999999999999999987653
No 104
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2e-39 Score=351.35 Aligned_cols=256 Identities=23% Similarity=0.361 Sum_probs=198.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeCC----CCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSD----GTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
.++|++.+.||+|+||+||+|+... +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678889999999999999998642 4579999987543 344567899999999999999999999984 466889
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999877667999999999999999999999 789999999999999999999999999999877543
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
... ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||......+ ....+.......
T Consensus 170 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~~~~~--------- 237 (281)
T 1mp8_A 170 TYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGERLP--------- 237 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCCC---------
T ss_pred ccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcCCCCC---------
Confidence 221 2223457789999999988899999999999999999997 999997643322 111111110000
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
....++..+.+++.+||+.+|++|||+.|+++.|+++.
T Consensus 238 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 238 --------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00123456789999999999999999999999998875
No 105
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.8e-39 Score=353.11 Aligned_cols=260 Identities=23% Similarity=0.344 Sum_probs=214.2
Q ss_pred hcCCCcCccccCcceEEEEEEEe------CCCCEEEEEEeeccch-hhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF------SDGTSFAIKVFNLQLD-RAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 753 (977)
.++|++.+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 36788999999999999999984 2578999999975543 3457799999999999 99999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCCc-----------------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee
Q 036011 754 RALVLELMPNGSLEKWLYSDNY-----------------FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL 816 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 816 (977)
.++||||+++|+|.+++..... .+++..++.++.|+++||+||| +.||+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999986542 3899999999999999999999 7899999999999999
Q ss_pred CCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccH
Q 036011 817 DEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSL 895 (977)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 895 (977)
+.++.+||+|||++................+|+.|+|||++.+..++.++||||+|+++|||++ |+.||........ .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~ 257 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-F 257 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-H
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-H
Confidence 9999999999999988765544333344557889999999988999999999999999999999 9999876433221 2
Q ss_pred HHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 896 KKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
........... . ...++..+.+++.+||+.||.+|||+.|++++|+++..
T Consensus 258 ~~~~~~~~~~~------------~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 258 YKMIKEGFRML------------S-----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHHHHHTCCCC------------C-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhccCCCCC------------C-----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 22221111100 0 01123457899999999999999999999999988763
No 106
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=350.15 Aligned_cols=246 Identities=25% Similarity=0.310 Sum_probs=204.3
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||+||+|+.. +|+.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367899999999999999999975 69999999997653 23456688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999998755 3899999999999999999999 899999999999999999999999999999876432
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ ........ ....
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~------------~~~~ 222 (318)
T 1fot_A 160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-TYEKILNA------------ELRF 222 (318)
T ss_dssp ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHC------------CCCC
T ss_pred ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhC------------CCCC
Confidence 223469999999999999999999999999999999999999997532211 11111111 0000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRI-----YMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~ev~~~ 956 (977)
.. .....+.+++.+|++.||++|| ++.|++++
T Consensus 223 p~-------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 223 PP-------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CT-------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CC-------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 00 1233578999999999999999 88888753
No 107
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.6e-37 Score=361.53 Aligned_cols=344 Identities=28% Similarity=0.413 Sum_probs=173.1
Q ss_pred CCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceee
Q 036011 97 LRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVN 176 (977)
Q Consensus 97 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~ 176 (977)
+++|+.|++++|.+. .+|. +..+++|++|+|++|.+++..| ++++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--------------------------~~~l~~L~~L~ 96 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--------------------------LKNLTKLVDIL 96 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--------------------------GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--------------------------hhccccCCEEE
Confidence 455555555555555 3443 4555555555555555553221 44444445555
Q ss_pred eecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCce
Q 036011 177 LAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNK 256 (977)
Q Consensus 177 L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~ 256 (977)
+++|++++..+ ++++++|++|++++|++++.. + +..+++|++|++++|+
T Consensus 97 l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~---------------------------~--~~~l~~L~~L~l~~n~ 145 (466)
T 1o6v_A 97 MNNNQIADITP--LANLTNLTGLTLFNNQITDID---------------------------P--LKNLTNLNRLELSSNT 145 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG---------------------------G--GTTCTTCSEEEEEEEE
T ss_pred CCCCccccChh--hcCCCCCCEEECCCCCCCCCh---------------------------H--HcCCCCCCEEECCCCc
Confidence 55555443222 445555555555555444221 1 2233444444444444
Q ss_pred eeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCC
Q 036011 257 LTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPL 336 (977)
Q Consensus 257 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 336 (977)
+++ ++ .+..+++|++|+++ |.+.+..+ +..+++|+.|++++|.++.++ .+..+++|++|++++|.+
T Consensus 146 l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~---------~l~~l~~L~~L~l~~n~l 211 (466)
T 1o6v_A 146 ISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDIS---------VLAKLTNLESLIATNNQI 211 (466)
T ss_dssp ECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCCCG---------GGGGCTTCSEEECCSSCC
T ss_pred cCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCCCh---------hhccCCCCCEEEecCCcc
Confidence 442 12 24445555555554 33332221 555555555555555554321 144455555555555554
Q ss_pred CCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccc
Q 036011 337 RGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYD 416 (977)
Q Consensus 337 ~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 416 (977)
.+..| ++.+++|+.|++++|.+++. ..+..+++|++|++++|.+++..+
T Consensus 212 ~~~~~---------------------------~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-- 260 (466)
T 1o6v_A 212 SDITP---------------------------LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP-- 260 (466)
T ss_dssp CCCGG---------------------------GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred ccccc---------------------------ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--
Confidence 43211 33455566666666665532 345666666666666666664433
Q ss_pred cccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccC
Q 036011 417 LCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLI 496 (977)
Q Consensus 417 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 496 (977)
+..+++|+.|++++|++++..+ +..+++|++|++++|++.+..+ +..+++|+.|++++|++++..| +..+++|+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 334 (466)
T 1o6v_A 261 LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334 (466)
T ss_dssp GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCC
T ss_pred hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCC
Confidence 5556666666666666654333 5555666666666666654332 4555555555555555554433 44555555
Q ss_pred eeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccC
Q 036011 497 NLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLS 554 (977)
Q Consensus 497 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 554 (977)
+|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 335 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 335 RLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp EEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred EeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 555555555532 245555555555555555554444 455555555555555555
No 108
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3e-39 Score=359.15 Aligned_cols=259 Identities=25% Similarity=0.424 Sum_probs=211.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC--------CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecC
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS--------DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNN 751 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 751 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467899999999999999999863 47789999997653 34467789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhcCCc---------------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee
Q 036011 752 DFRALVLELMPNGSLEKWLYSDNY---------------FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL 816 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 816 (977)
+..++||||+++|+|.+++..... .+++..++.++.||++||+||| +.||+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 999999999999999999986542 3889999999999999999999 7899999999999999
Q ss_pred CCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccH
Q 036011 817 DEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSL 895 (977)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 895 (977)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |..||......+ .
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~ 268 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--L 268 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--H
Confidence 9999999999999987765443333334457889999999988899999999999999999999 999987542211 1
Q ss_pred HHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 896 KKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
........... . ...+...+.+++.+||+.+|.+||++.|+++.|+++..
T Consensus 269 ~~~~~~~~~~~-----------~------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 269 FKLLKEGHRMD-----------K------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHHHHHTCCCC-----------C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCC-----------C------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11111111000 0 01233457899999999999999999999999998865
No 109
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=352.32 Aligned_cols=250 Identities=24% Similarity=0.324 Sum_probs=196.3
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch--------------------------hhHHHHHHHHHHHH
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD--------------------------RAFRSFDSECEVLR 734 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 734 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467999999999999999999864 689999999875431 12356889999999
Q ss_pred hcCCCCcceEeeeeec--CCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCC
Q 036011 735 NVRHRNLIKIFSSCCN--NDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPS 812 (977)
Q Consensus 735 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~ 812 (977)
+++||||+++++++.+ .+..++||||+++++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999986 56889999999999998876443 4899999999999999999999 789999999999
Q ss_pred ceeeCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCC---cCcccchhhHhHHHHHHhcCCCCCCcCC
Q 036011 813 NILLDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGI---VSSKCDVYSYGVLLTETFTRKKPTDDMF 889 (977)
Q Consensus 813 NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~ 889 (977)
||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999987754322 233456999999999987765 4789999999999999999999997532
Q ss_pred cccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 890 TGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.. ............ . + ....+...+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~--~~~~~~~~~~~~---------~---~----~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 IM--CLHSKIKSQALE---------F---P----DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HH--HHHHHHHHCCCC---------C---C----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HH--HHHHHHhcccCC---------C---C----CccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11 111111110000 0 0 001123457899999999999999999998753
No 110
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.5e-39 Score=349.88 Aligned_cols=267 Identities=24% Similarity=0.323 Sum_probs=203.2
Q ss_pred cCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccch--hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLD--RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
++|++.+.||+|+||+||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57889999999999999999988899999999875532 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcc
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 840 (977)
+++ +|.+++......+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-- 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc--
Confidence 975 999999876667999999999999999999999 78999999999999999999999999999987653221
Q ss_pred eeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC-C--Cchhhh-----c
Q 036011 841 TQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL-P--HGLMEV-----V 911 (977)
Q Consensus 841 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~-----~ 911 (977)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+.......- + ..+... .
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccc
Confidence 2233468999999999876 468999999999999999999999997643222 1222111110 0 001000 0
Q ss_pred chhhhcccc--CchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 912 DTNLLRQEH--TSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 912 ~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
++....... .......+...+.+++.+|++.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111000000 000001234457899999999999999999999764
No 111
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=358.26 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=197.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCC--CCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRH--RNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv 757 (977)
.+.|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|++++++++| |||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45699999999999999999998889999999987543 3445778999999999976 9999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
||+ .+|+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+|||++ ++.+||+|||+++......
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 994 5889999998754 4899999999999999999999 78999999999999997 6789999999998876544
Q ss_pred CcceeeccccCCcccCccccCC-----------CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTE-----------GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG 906 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (977)
........+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..............
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~------- 234 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII------- 234 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH-------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh-------
Confidence 3333345579999999998754 6789999999999999999999999975432211111111
Q ss_pred hhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 907 LMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
++........ .....+.+++.+||+.||.+|||+.|++++
T Consensus 235 -----~~~~~~~~~~-----~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 -----DPNHEIEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp -----CTTSCCCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----cCCcccCCcc-----cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111000000 012347899999999999999999999875
No 112
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.6e-39 Score=349.25 Aligned_cols=257 Identities=25% Similarity=0.373 Sum_probs=212.0
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
.++|++.+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 357888999999999999999988889999999976533 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcce
Q 036011 762 PNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVT 841 (977)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 841 (977)
++++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....... ...
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-ccc
Confidence 999999999887667899999999999999999999 7899999999999999999999999999998764321 111
Q ss_pred eeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcccc
Q 036011 842 QTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEH 920 (977)
Q Consensus 842 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (977)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....+...... ..+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~i~~~~~~-----------~~~- 227 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFRL-----------YKP- 227 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCCC-----------CCC-
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HHHHHhcCCcC-----------CCC-
Confidence 223357788999999988899999999999999999999 899987532211 11111111000 000
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 921 TSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
..+...+.+++.+||+.+|++||+++|++++|+++..
T Consensus 228 -----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 228 -----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0123457899999999999999999999999999875
No 113
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-39 Score=356.66 Aligned_cols=247 Identities=25% Similarity=0.368 Sum_probs=202.6
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|.+.+.||+|+||+||+|+. .+++.||||++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999996 478999999997543 22345789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+ +|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||++++++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 789988887654 3899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
. ....+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+....+. ...+.....
T Consensus 163 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------~~~i~~~~~- 225 (336)
T 3h4j_B 163 F---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------FKKVNSCVY- 225 (336)
T ss_dssp T---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------BCCCCSSCC-
T ss_pred c---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------HHHHHcCCC-
Confidence 2 233469999999999988876 7899999999999999999999976422211 000000000
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..+ ..+...+.+++.+|++.||.+|||++|++++
T Consensus 226 ~~p------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 VMP------DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCC------TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCc------ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 000 1123457899999999999999999999764
No 114
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.2e-39 Score=377.28 Aligned_cols=256 Identities=23% Similarity=0.411 Sum_probs=209.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
.++|.+.+.||+|+||+||+|++++++.||||+++... ...+.|.+|++++++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 46688889999999999999999888999999997543 34678999999999999999999999986 56789999999
Q ss_pred CCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcc
Q 036011 762 PNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 762 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 840 (977)
++|+|.++++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....... .
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~ 340 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-T 340 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-H
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce-e
Confidence 9999999997543 25889999999999999999999 78999999999999999999999999999987643211 1
Q ss_pred eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccc
Q 036011 841 TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQE 919 (977)
Q Consensus 841 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (977)
......+|+.|+|||++..+.++.++|||||||++|||+| |+.||.+....+ ....+.....
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~--------------- 403 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYR--------------- 403 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHHTCC---------------
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC---------------
Confidence 1122346788999999998899999999999999999999 999997643221 1111111100
Q ss_pred cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 920 HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.+.+..++..+.+++.+||+.+|++|||+.++++.|+++..
T Consensus 404 --~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 404 --MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 00011245568899999999999999999999999999864
No 115
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.3e-39 Score=347.72 Aligned_cols=251 Identities=25% Similarity=0.400 Sum_probs=194.0
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccch----hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLD----RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||+||+|++. ++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 367889999999999999999974 89999999875432 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCC---eEeCCCCCCceeeCC--------CCceEEee
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTP---VVHCDLKPSNILLDE--------DMVAHVSD 826 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~---ivH~dlk~~NIll~~--------~~~~kl~D 826 (977)
|||+++++|.+++... .+++..+..++.|+++||+||| +.+ |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998654 4899999999999999999999 566 999999999999986 77899999
Q ss_pred cccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc
Q 036011 827 FGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG 906 (977)
Q Consensus 827 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (977)
||++........ ....||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ............
T Consensus 160 fg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~ 234 (271)
T 3dtc_A 160 FGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-AYGVAMNKLALP 234 (271)
T ss_dssp CCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-HHHHHTSCCCCC
T ss_pred CCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHhhhcCCCCCC
Confidence 999987654322 234589999999999988999999999999999999999999976432211 001000000000
Q ss_pred hhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHch
Q 036011 907 LMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKI 960 (977)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~ 960 (977)
....++..+.+++.+||+.+|++|||+.|++++|+++
T Consensus 235 -----------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 -----------------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -----------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0012234578999999999999999999999999864
No 116
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.6e-39 Score=361.78 Aligned_cols=249 Identities=20% Similarity=0.277 Sum_probs=198.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 756 (977)
.++|++.++||+|+||+||+|+.+ +++.||||++++.. ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999975 58899999998653 23345578899999887 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999997654 4899999999999999999999 789999999999999999999999999999864322
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCccccc---HHHHHHhhCCCchhhhcch
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMS---LKKWVKESLPHGLMEVVDT 913 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 913 (977)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+.. ...+.... +...
T Consensus 207 ~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~-------i~~~ 277 (396)
T 4dc2_A 207 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-------ILEK 277 (396)
T ss_dssp T--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHH-------HHHC
T ss_pred C--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHH-------Hhcc
Confidence 2 2233457999999999999999999999999999999999999999653221110 00111000 0000
Q ss_pred hhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCH
Q 036011 914 NLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYM 950 (977)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~ 950 (977)
..... ..+...+.+++.+||+.||.+||++
T Consensus 278 ~~~~p-------~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 278 QIRIP-------RSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCCCC-------TTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ccCCC-------CcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 00000 1123457899999999999999996
No 117
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.5e-39 Score=352.28 Aligned_cols=260 Identities=20% Similarity=0.312 Sum_probs=206.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeCC-C-------CEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSD-G-------TSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 753 (977)
.++|.+.+.||+|+||+||+|+... + ..||+|++........+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578899999999999999998652 3 5799999987766677889999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc--------eEEe
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV--------AHVS 825 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~--------~kl~ 825 (977)
.++||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999887767999999999999999999999 789999999999999998887 9999
Q ss_pred ecccccccCCCCCcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCC
Q 036011 826 DFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLP 904 (977)
Q Consensus 826 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (977)
|||++...... ....+|+.|+|||++.+ ..++.++||||+|+++|||++|..|+.......... ........
T Consensus 164 Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-~~~~~~~~ 236 (289)
T 4fvq_A 164 DPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-QFYEDRHQ 236 (289)
T ss_dssp CCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHTTCC
T ss_pred cCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-HHhhccCC
Confidence 99998755321 22358899999999887 779999999999999999999665543322211111 11110000
Q ss_pred CchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhcCcccccc
Q 036011 905 HGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKIIGVLVLSR 970 (977)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~ 970 (977)
.. .. ....+.+++.+||+.||++|||+.|++++|+++...+..+.+.
T Consensus 237 --~~----------~~-------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~~ 283 (289)
T 4fvq_A 237 --LP----------AP-------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGS 283 (289)
T ss_dssp --CC----------CC-------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---------
T ss_pred --CC----------CC-------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCCc
Confidence 00 00 1123678999999999999999999999999998766555443
No 118
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.2e-38 Score=354.15 Aligned_cols=252 Identities=26% Similarity=0.362 Sum_probs=200.0
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC------
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND------ 752 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 752 (977)
..++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3467899999999999999999976 79999999997544 335577999999999999999999999986543
Q ss_pred ---------------------------------------------------eeEEEEeccCCCCHHHHhhcCCc--cCCH
Q 036011 753 ---------------------------------------------------FRALVLELMPNGSLEKWLYSDNY--FLDL 779 (977)
Q Consensus 753 ---------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~--~~~~ 779 (977)
..++||||+++|+|.+++..... ..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37899999999999999987543 4567
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc----------ceeeccccCC
Q 036011 780 LERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS----------VTQTMTIATI 849 (977)
Q Consensus 780 ~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~----------~~~~~~~gt~ 849 (977)
..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++........ .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 788999999999999999 789999999999999999999999999999887654221 1223346999
Q ss_pred cccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHH
Q 036011 850 GYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCL 929 (977)
Q Consensus 850 ~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (977)
.|+|||++.+..++.++||||+||++|||++|..|+... ........ ............
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----~~~~~~~~-----------------~~~~~~~~~~~~ 299 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----VRIITDVR-----------------NLKFPLLFTQKY 299 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----HHHHHHHH-----------------TTCCCHHHHHHC
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----HHHHHHhh-----------------ccCCCcccccCC
Confidence 999999999999999999999999999999987764221 00000000 001111223345
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 930 LSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 930 ~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..+.+++.+||+.||++|||+.|++++
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 567899999999999999999999864
No 119
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=359.39 Aligned_cols=246 Identities=22% Similarity=0.311 Sum_probs=199.9
Q ss_pred CccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEeccCCCCH
Q 036011 688 CNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELMPNGSL 766 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 766 (977)
.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 567999999999999864 6999999999876656677899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee--CCCCceEEeecccccccCCCCCcceeec
Q 036011 767 EKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL--DEDMVAHVSDFGLSKLFDEGDDSVTQTM 844 (977)
Q Consensus 767 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll--~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 844 (977)
.+++......+++..+..++.||++||+||| +.+|+||||||+||++ +.++.+||+|||+++.+..... ...
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~~ 247 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKV 247 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---ccc
Confidence 9999877667999999999999999999999 7899999999999999 6778999999999998754332 223
Q ss_pred cccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccCchH
Q 036011 845 TIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSA 924 (977)
Q Consensus 845 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (977)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+........ ...
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~---------------~~~ 311 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWDLE---------------DEE 311 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCCSC---------------SGG
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCCC---------------hhh
Confidence 46999999999999999999999999999999999999999764321 11222221111000 000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 925 EMDCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 925 ~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
...+...+.+++.+|++.||.+|||+.|+++
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1123446789999999999999999999987
No 120
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=355.88 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=202.0
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 67899999999999999999965 68999999997553 234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||+.+|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.+....
T Consensus 95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET- 169 (384)
T ss_dssp CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence 9999999999998654 4899999999999999999999 7899999999999999999999999999998775432
Q ss_pred cceeeccccCCcccCccccCC---CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc-cHHHHHHhhCCCchhhhcchh
Q 036011 839 SVTQTMTIATIGYMAPEYGTE---GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM-SLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 914 (977)
.....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ............
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--------- 238 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT--------- 238 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC---------
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC---------
Confidence 2334579999999999864 4589999999999999999999999975322211 111111110000
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCC-HHHHHH
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIY-MTDAAV 955 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-~~ev~~ 955 (977)
.+ ..+...+.+++.+||+.+|.+||+ ++++.+
T Consensus 239 ---~p------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 239 ---YP------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---CC------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---CC------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 00 112345789999999999999998 666543
No 121
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.3e-38 Score=362.04 Aligned_cols=277 Identities=20% Similarity=0.267 Sum_probs=208.8
Q ss_pred hhcCCCcCccccCc--ceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeE
Q 036011 681 ATDGFNECNLLGRG--SFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRA 755 (977)
Q Consensus 681 ~~~~~~~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 755 (977)
..++|++.+.||+| +||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 35679999999999 99999999976 79999999997654 344567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcC-CccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 756 LVLELMPNGSLEKWLYSD-NYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
+||||+++|+|.+++... ...+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999999765 235899999999999999999999 7899999999999999999999999999987553
Q ss_pred CCCCc-----ceeeccccCCcccCccccCC--CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc-
Q 036011 835 EGDDS-----VTQTMTIATIGYMAPEYGTE--GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG- 906 (977)
Q Consensus 835 ~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~- 906 (977)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+.....+ ....+..
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~ 258 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL-NGTVPCLL 258 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh-cCCCCccc
Confidence 22111 11122368999999999887 679999999999999999999999997644332211111 1000000
Q ss_pred ----------------------hhhhcchhh----hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH--HH
Q 036011 907 ----------------------LMEVVDTNL----LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK--LK 958 (977)
Q Consensus 907 ----------------------~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~--L~ 958 (977)
..+...... .......+....+...+.+++.+||+.||++|||++|++++ ++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~ 338 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence 000000000 00000011122345568999999999999999999999876 44
Q ss_pred chh
Q 036011 959 KIK 961 (977)
Q Consensus 959 ~~~ 961 (977)
+++
T Consensus 339 ~~~ 341 (389)
T 3gni_B 339 QIK 341 (389)
T ss_dssp GC-
T ss_pred HHh
Confidence 443
No 122
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=357.38 Aligned_cols=258 Identities=26% Similarity=0.413 Sum_probs=201.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCE----EEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTS----FAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRA 755 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 755 (977)
.++|++.+.||+|+||+||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367999999999999999999964 4554 5677664332 345677999999999999999999999998765 78
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCC
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 835 (977)
+|+||+.+|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887777999999999999999999999 78999999999999999999999999999988765
Q ss_pred CCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 836 GDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 836 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
...........+|+.|+|||++.+..++.++||||+||++|||++ |..||......+ ............
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~~~-------- 239 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGERLP-------- 239 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCCC--------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCCCC--------
Confidence 443333344457889999999999999999999999999999999 999997643322 222221111000
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
....+...+.+++.+||+.+|.+||++.|+++.|+++..
T Consensus 240 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 240 ---------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ---------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 001123457899999999999999999999999998874
No 123
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.2e-39 Score=357.58 Aligned_cols=252 Identities=24% Similarity=0.316 Sum_probs=191.3
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
..++|++.+.||+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3567999999999999999999976 58899999987543 34568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC---CCceEEeecccccccCCC
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE---DMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~~~~~~ 836 (977)
|+++|+|.+++...+ .+++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999997654 4899999999999999999999 789999999999999975 889999999999876532
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+............. .
T Consensus 205 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~-----~----- 271 (349)
T 2w4o_A 205 V---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYF-----I----- 271 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCC-----C-----
T ss_pred c---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCcc-----C-----
Confidence 2 22335699999999999999999999999999999999999999976433322222221111100 0
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+....+...+.+++.+|++.||++|||+.|++++
T Consensus 272 -----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 272 -----SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011233457899999999999999999999874
No 124
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3e-39 Score=377.45 Aligned_cols=256 Identities=23% Similarity=0.374 Sum_probs=211.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
.++|++.+.||+|+||.||+|++. .+..||||++.... ...+.|.+|++++++++||||+++++++.+.+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 356888899999999999999976 48899999997553 3457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 761 MPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 761 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-Y 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-E
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-e
Confidence 99999999998643 45899999999999999999999 7899999999999999999999999999998765432 1
Q ss_pred ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
.......+++.|+|||++.+..++.++|||||||++|||++ |..||......+ ....+..... .
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~------------~- 438 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDYR------------M- 438 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTCC------------C-
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC------------C-
Confidence 12223346788999999998999999999999999999999 999987643221 1221111110 0
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
..+..++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus 439 ----~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 439 ----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 001123456889999999999999999999999999875
No 125
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.7e-38 Score=341.58 Aligned_cols=254 Identities=22% Similarity=0.329 Sum_probs=209.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467899999999999999999975 78999999987553 3445778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++++|.+++.... .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||.+..+......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999987654 4899999999999999999999 789999999999999999999999999999876543322
Q ss_pred ceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
.......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||............|........
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------ 229 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN------------ 229 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTST------------
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccC------------
Confidence 22334568999999999987765 78999999999999999999999765444333444332111000
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
........+.+++.+|++.+|++|||++|++++
T Consensus 230 -----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 -----PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 001123457889999999999999999999763
No 126
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.6e-38 Score=360.10 Aligned_cols=251 Identities=23% Similarity=0.362 Sum_probs=197.7
Q ss_pred cCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcC--CCCcceEeeeeecCCeeEEEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVR--HRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 758 (977)
+.|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4599999999999999999998889999999987543 345577999999999996 599999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
| +.+++|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56889999998765 4889999999999999999999 89999999999999996 58999999999988765433
Q ss_pred cceeeccccCCcccCccccCC-----------CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCch
Q 036011 839 SVTQTMTIATIGYMAPEYGTE-----------GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGL 907 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (977)
.......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+...
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~--------- 280 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI--------- 280 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH---------
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHH---------
Confidence 333344579999999998764 468999999999999999999999997543221111111
Q ss_pred hhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 908 MEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+.......... ....+.+++.+||+.||.+|||+.|++++
T Consensus 281 ---~~~~~~~~~~~~-----~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 281 ---IDPNHEIEFPDI-----PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---HCTTSCCCCCCC-----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---hCccccCCCCcc-----chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111111000000 12357899999999999999999999865
No 127
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.1e-39 Score=356.56 Aligned_cols=260 Identities=20% Similarity=0.340 Sum_probs=197.4
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCe----
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDF---- 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 753 (977)
.++|++.+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999996 478999999997653 2345678999999999999999999999876543
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 389999999999999997654 4899999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCc-ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcc
Q 036011 834 DEGDDS-VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVD 912 (977)
Q Consensus 834 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (977)
...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+. ...........
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~------- 238 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVREDPIP------- 238 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCCCCC-------
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcCCCCC-------
Confidence 543322 222335689999999999999999999999999999999999999976432211 11111110000
Q ss_pred hhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHH-HHHHchh
Q 036011 913 TNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAA-VKLKKIK 961 (977)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~-~~L~~~~ 961 (977)
+ ......++..+.+++.+||+.||++||++.+++ +.+.++.
T Consensus 239 ~--------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 239 P--------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp H--------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred c--------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 0 000112345678999999999999999666554 5555544
No 128
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.6e-39 Score=351.86 Aligned_cols=269 Identities=23% Similarity=0.376 Sum_probs=207.5
Q ss_pred cCCCcCccccCcceEEEEEEEe-----CCCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC--Cee
Q 036011 683 DGFNECNLLGRGSFGSVYKGTF-----SDGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN--DFR 754 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 754 (977)
+.|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588889999999999999983 368999999987553 33457789999999999999999999999876 668
Q ss_pred EEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 755 ALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999766666999999999999999999999 7899999999999999999999999999998876
Q ss_pred CCCCc-ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCC--c-hhhh
Q 036011 835 EGDDS-VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPH--G-LMEV 910 (977)
Q Consensus 835 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 910 (977)
..... .......+|..|+|||++.+..++.++||||+|+++|||++|+.|+.... ..+.....+. . ....
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHHHCSCCGGGHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhccCCcccccCHHH
Confidence 54332 12233468888999999999999999999999999999999999864321 1111100000 0 0000
Q ss_pred cchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 911 VDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
....+... ........++..+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 252 ~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVNTLKEG-KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhcc-CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 00000000 000111123456889999999999999999999999998763
No 129
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.5e-39 Score=358.82 Aligned_cols=273 Identities=26% Similarity=0.339 Sum_probs=212.7
Q ss_pred cCCCcCccccCcceEEEEEEEe-----CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeee--cCCeeE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTF-----SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCC--NNDFRA 755 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~ 755 (977)
++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788999999999999999984 368899999998776666778999999999999999999999886 456788
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCC
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 835 (977)
+||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999876556999999999999999999999 78999999999999999999999999999998754
Q ss_pred CCCcc-eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 836 GDDSV-TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 836 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
..... ......+|+.|+|||++.+..++.++||||+|+++|+|++|+.||....... ...+...........+...
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~- 256 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGCERDVPALSRLLEL- 256 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH--HHHCC----CCHHHHHHHH-
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh--hhhcccccccccHHHHHHH-
Confidence 43321 2233458888999999999999999999999999999999999986422110 0000000000001111100
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
+. ..........++..+.+++.+||+.||++|||++|++++|+++..
T Consensus 257 ~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 257 LE-EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred hh-cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00 000011112345568899999999999999999999999988754
No 130
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=354.01 Aligned_cols=258 Identities=26% Similarity=0.466 Sum_probs=203.1
Q ss_pred cCCCcCccccCcceEEEEEEEeCC-----CCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFSD-----GTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
++|+..+.||+|+||+||+|+... +..||||++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467778999999999999998642 2469999987653 3345678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999877667999999999999999999999 789999999999999999999999999999876543
Q ss_pred CCc-ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 837 DDS-VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 837 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....+.....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~~~~~~---------- 268 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKAINDGFR---------- 268 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCC----------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHCCCc----------
Confidence 221 12222346788999999999999999999999999999999 999996543211 1111111000
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
. +....++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 269 ~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 269 L-------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp C-------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred C-------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 0011234467899999999999999999999999988764
No 131
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.5e-39 Score=365.56 Aligned_cols=259 Identities=20% Similarity=0.279 Sum_probs=207.7
Q ss_pred HHHHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC
Q 036011 676 LDIQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN 751 (977)
Q Consensus 676 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 751 (977)
.++....++|++.+.||+|+||+||+|+.. +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344556788999999999999999999975 68999999997542 22234588999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccc
Q 036011 752 DFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSK 831 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 831 (977)
+..++||||+++|+|.+++.... +++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~~--~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 99999999999999999997654 899999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccCCCC----cCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCch
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTEGI----VSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGL 907 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (977)
...... .......+||+.|+|||++.+.. ++.++||||+||++|||++|+.||......+ ..........
T Consensus 217 ~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~---- 290 (410)
T 3v8s_A 217 KMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMNHKN---- 290 (410)
T ss_dssp ECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHHH----
T ss_pred eeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh-HHHHHHhccc----
Confidence 765432 22233467999999999987655 8899999999999999999999997532211 1111111000
Q ss_pred hhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 036011 908 MEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQ--RIYMTDAAVK 956 (977)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~ev~~~ 956 (977)
.+... ....+...+.+++.+|++.+|.+ ||++.|++++
T Consensus 291 ------~~~~p-----~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 ------SLTFP-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ------HCCCC-----TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ------cccCC-----CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00000 00012345788999999999988 9999999875
No 132
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.9e-38 Score=352.92 Aligned_cols=249 Identities=21% Similarity=0.287 Sum_probs=199.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 756 (977)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.+.. ....+.+.+|..+++++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357899999999999999999975 68999999998653 33456688999999988 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999997654 4899999999999999999999 789999999999999999999999999999864322
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCccccc---HHHHHHhhCCCchhhhcch
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMS---LKKWVKESLPHGLMEVVDT 913 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 913 (977)
.. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ....... .+...
T Consensus 164 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-------~i~~~ 234 (345)
T 3a8x_A 164 GD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-------VILEK 234 (345)
T ss_dssp TC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH-------HHHHC
T ss_pred CC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH-------HHHcC
Confidence 21 233457999999999999999999999999999999999999999653221110 0011100 00000
Q ss_pred hhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCH
Q 036011 914 NLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYM 950 (977)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~ 950 (977)
..... ......+.+++.+||+.||.+||++
T Consensus 235 ~~~~p-------~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 235 QIRIP-------RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CCCCC-------TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCCCC-------CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 00000 1123457899999999999999996
No 133
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.2e-38 Score=351.69 Aligned_cols=267 Identities=26% Similarity=0.377 Sum_probs=215.4
Q ss_pred HHHHHHhhcCCCcCccccCcceEEEEEEEe------CCCCEEEEEEeeccc-hhhHHHHHHHHHHHHhc-CCCCcceEee
Q 036011 675 YLDIQRATDGFNECNLLGRGSFGSVYKGTF------SDGTSFAIKVFNLQL-DRAFRSFDSECEVLRNV-RHRNLIKIFS 746 (977)
Q Consensus 675 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~ 746 (977)
..+.....++|++.+.||+|+||+||+|++ .+++.||||++.... ....+.+.+|+++++++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 334444567899999999999999999974 256899999997654 33456789999999999 7999999999
Q ss_pred eeecCC-eeEEEEeccCCCCHHHHhhcCCc---------------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 036011 747 SCCNND-FRALVLELMPNGSLEKWLYSDNY---------------FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLK 810 (977)
Q Consensus 747 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk 810 (977)
++...+ ..++||||+++|+|.+++..... .+++..+..++.|+++||+||| +.||+|||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dik 175 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLA 175 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCc
Confidence 987654 58999999999999999987543 2789999999999999999999 7899999999
Q ss_pred CCceeeCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCC
Q 036011 811 PSNILLDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMF 889 (977)
Q Consensus 811 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~ 889 (977)
|+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |..||....
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 9999999999999999999987765444344444568899999999999999999999999999999998 999997643
Q ss_pred cccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 890 TGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
..+. ............. . ..+...+.+++.+||+.+|.+|||+.|++++|+++..
T Consensus 256 ~~~~-~~~~~~~~~~~~~-----------~------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 256 IDEE-FCRRLKEGTRMRA-----------P------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp CSHH-HHHHHHHTCCCCC-----------C------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhHH-HHHHhccCccCCC-----------C------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 3222 1111111111000 0 0123457899999999999999999999999998764
No 134
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6.5e-39 Score=355.87 Aligned_cols=250 Identities=27% Similarity=0.345 Sum_probs=202.8
Q ss_pred HHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCe
Q 036011 679 QRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDF 753 (977)
Q Consensus 679 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 753 (977)
....++|++.+.||+|+||+||+|+.+ +|+.||||+++... ....+.+..|.++++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 445688999999999999999999975 68999999997653 23456678899999887 89999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999999997644 3899999999999999999999 789999999999999999999999999999865
Q ss_pred CCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcch
Q 036011 834 DEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDT 913 (977)
Q Consensus 834 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (977)
..... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+....+
T Consensus 169 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~i~~~~~--------- 235 (345)
T 1xjd_A 169 MLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFHSIRMDNP--------- 235 (345)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCC---------
T ss_pred ccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHhCCC---------
Confidence 33221 2334579999999999999999999999999999999999999997542211 1111111000
Q ss_pred hhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHH-HHH
Q 036011 914 NLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMT-DAA 954 (977)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~-ev~ 954 (977)
.+ . ..+...+.+++.+|++.+|++||++. |+.
T Consensus 236 ~~--p-------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 FY--P-------RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CC--C-------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CC--C-------cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 00 0 01234578899999999999999997 554
No 135
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=350.78 Aligned_cols=261 Identities=22% Similarity=0.263 Sum_probs=207.4
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeee----cCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCC----NNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~l 756 (977)
.++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|+++++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35789999999999999999997 579999999987766666788999999999999999999999986 3447789
Q ss_pred EEeccCCCCHHHHhhc---CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 757 VLELMPNGSLEKWLYS---DNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
||||+++|+|.+++.. ....+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999876 3446899999999999999999999 789999999999999999999999999998765
Q ss_pred CCCCCcc-------eeeccccCCcccCccccCCCC---cCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC
Q 036011 834 DEGDDSV-------TQTMTIATIGYMAPEYGTEGI---VSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL 903 (977)
Q Consensus 834 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 903 (977)
....... ......||+.|+|||++.+.. ++.++||||+|+++|||++|+.||..................
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 264 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence 4211110 011235799999999987554 789999999999999999999998643222222222111100
Q ss_pred CCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 904 PHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
. .. ....+...+.+++.+||+.||.+|||+.|++++|+++++
T Consensus 265 ~------------~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 265 S------------IP-----QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp -------------CC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred C------------CC-----ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 0 00 001123457899999999999999999999999999985
No 136
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.8e-39 Score=372.72 Aligned_cols=256 Identities=27% Similarity=0.453 Sum_probs=204.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
.++|++.+.||+|+||+||+|+++++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 35688889999999999999999888889999997543 234679999999999999999999999876 6789999999
Q ss_pred CCCCHHHHhhcC-CccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcc
Q 036011 762 PNGSLEKWLYSD-NYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 762 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 840 (977)
++|+|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....... .
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 336 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce-e
Confidence 999999999753 235899999999999999999999 78999999999999999999999999999987654322 1
Q ss_pred eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccc
Q 036011 841 TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQE 919 (977)
Q Consensus 841 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (977)
......+++.|+|||++.++.++.++||||||+++|||++ |+.||.+....+ ....+.....
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~--------------- 399 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYR--------------- 399 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCC---------------
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC---------------
Confidence 2223347889999999998899999999999999999999 999987643221 1111111000
Q ss_pred cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 920 HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.+.+..++..+.+++.+||+.+|++|||++++++.|+++..
T Consensus 400 --~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 400 --MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 00011244568899999999999999999999999998864
No 137
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.1e-38 Score=353.01 Aligned_cols=246 Identities=23% Similarity=0.237 Sum_probs=204.3
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367999999999999999999975 69999999997653 23456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 99999999999998654 3899999999999999999999 789999999999999999999999999999876532
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........... ..
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~------------~~ 257 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKIVSGKV------------RF 257 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC------------CC
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHHHHHcCCC------------CC
Confidence 12346999999999999999999999999999999999999999753221 11111111100 00
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIY-----MTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~ev~~~ 956 (977)
. ..+...+.+++.+||+.||.+||+ ++|++++
T Consensus 258 p-------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 258 P-------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp C-------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred C-------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 0 012345789999999999999998 7877653
No 138
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.7e-39 Score=356.47 Aligned_cols=274 Identities=24% Similarity=0.334 Sum_probs=198.7
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeec-----CCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCN-----NDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~~l 756 (977)
.++|++.+.||+|+||+||+|+. +++.||||++....... .....|+..+..++||||+++++++.. ....++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhh-HHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 46799999999999999999987 68999999997543221 122344444556899999999985532 335689
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCC---------CeEeCCCCCCceeeCCCCceEEeec
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHST---------PVVHCDLKPSNILLDEDMVAHVSDF 827 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~---------~ivH~dlk~~NIll~~~~~~kl~Df 827 (977)
||||+++|+|.+++.... .++..+..++.||++||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 90 v~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 999999999999997765 589999999999999999999 66 9999999999999999999999999
Q ss_pred ccccccCCCCC------cceeeccccCCcccCccccCC-------CCcCcccchhhHhHHHHHHhcCCCCCCcCCccccc
Q 036011 828 GLSKLFDEGDD------SVTQTMTIATIGYMAPEYGTE-------GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMS 894 (977)
Q Consensus 828 gla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 894 (977)
|+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.........
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 99987654321 112223469999999999887 46778999999999999999998776442221110
Q ss_pred HHHHHHhhCCCc----hhhhcchhhhcc--ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 895 LKKWVKESLPHG----LMEVVDTNLLRQ--EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 895 ~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...+........ ............ +........+...+.+++.+||+.||++|||++|+++.|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 000000000000 000000000000 01111122356678999999999999999999999999999874
No 139
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=349.06 Aligned_cols=245 Identities=21% Similarity=0.225 Sum_probs=194.5
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEEEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 758 (977)
++|++.++||+|+||+||+|+.. +|+.||||++.... ......+..|+..+.++ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56899999999999999999976 79999999986543 23334455566666555 8999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||+ +++|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 67999998876667999999999999999999999 7899999999999999999999999999998765432
Q ss_pred cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
......||++|+|||++.+ .++.++|||||||++|||++|..|+... ....... .. ...+
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~-----~~---~~~~----- 271 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLR-----QG---YLPP----- 271 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHT-----TT---CCCH-----
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHh-----cc---CCCc-----
Confidence 2233469999999998876 7999999999999999999997776431 1111110 00 0000
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.....+...+.+++.+|++.||++|||++|++++
T Consensus 272 ----~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 272 ----EFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 1111234568899999999999999999999863
No 140
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=363.59 Aligned_cols=262 Identities=23% Similarity=0.290 Sum_probs=208.4
Q ss_pred HHHHHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeec
Q 036011 675 YLDIQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN 750 (977)
Q Consensus 675 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 750 (977)
+.+.....++|++.+.||+|+||+||+|+.+ +|+.||||++.+.. ....+.+.+|.+++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444556788999999999999999999975 79999999997542 2334558899999999999999999999999
Q ss_pred CCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccc
Q 036011 751 NDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLS 830 (977)
Q Consensus 751 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 830 (977)
.+..++||||+++|+|.+++...+..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999876556999999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCcceeeccccCCcccCccccC-------CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC
Q 036011 831 KLFDEGDDSVTQTMTIATIGYMAPEYGT-------EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL 903 (977)
Q Consensus 831 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 903 (977)
+....... ......+||+.|+|||++. ...++.++||||+||++|||++|+.||......+ .........
T Consensus 210 ~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~- 286 (412)
T 2vd5_A 210 LKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-TYGKIVHYK- 286 (412)
T ss_dssp EECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHH-
T ss_pred eeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhcc-
Confidence 87754322 2223457999999999886 4679999999999999999999999997643221 111111100
Q ss_pred CCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCC---CCHHHHHHH
Q 036011 904 PHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQR---IYMTDAAVK 956 (977)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R---Ps~~ev~~~ 956 (977)
..+... .....++..+.+++.+|++ +|++| |+++|++++
T Consensus 287 ---------~~~~~p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 287 ---------EHLSLP----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ---------HHCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ---------cCcCCC----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 000000 0011234457899999999 99998 588888654
No 141
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.1e-38 Score=343.59 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=205.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC--CeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN--DFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 757 (977)
.++|.+.+.||+|+||+||+|+++ ++.||||++.... ....+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357889999999999999999984 8999999987653 34456799999999999999999999999877 788999
Q ss_pred EeccCCCCHHHHhhcCCc-cCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 758 LELMPNGSLEKWLYSDNY-FLDLLERLNIMIGVALALEYLHHGHSTP--VVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
|||+++|+|.+++..... .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999987654 5899999999999999999999 778 9999999999999999999999999876533
Q ss_pred CCCCcceeeccccCCcccCccccCCCCcCc---ccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhc
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTEGIVSS---KCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVV 911 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (977)
. ....||+.|+|||++.+..++. ++||||+|+++|||++|+.||......+. .............
T Consensus 165 ~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~---- 232 (271)
T 3kmu_A 165 S-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALEGLRPTI---- 232 (271)
T ss_dssp C-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHSCCCCCC----
T ss_pred c-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhcCCCCCC----
Confidence 2 1235899999999988765544 89999999999999999999976432221 1111111000000
Q ss_pred chhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 912 DTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
+..++..+.+++.+||+.||++|||++|+++.|++++
T Consensus 233 -------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 233 -------------PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp -------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred -------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 0122345789999999999999999999999999886
No 142
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=368.18 Aligned_cols=329 Identities=22% Similarity=0.218 Sum_probs=239.3
Q ss_pred CCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCC
Q 036011 245 PNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCR 324 (977)
Q Consensus 245 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~ 324 (977)
+++++|+|++|++++..+..|.++++|++|+|++|.++++.|..|.++++|++|+|++|.++.+++.. +..++
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~l~ 104 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV-------FTGLS 104 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTS-------STTCT
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCccc-------ccCCC
Confidence 46777777777777766777777777888888888777777777777777888888777777766543 56677
Q ss_pred CCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEe
Q 036011 325 NLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSL 404 (977)
Q Consensus 325 ~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 404 (977)
+|++|++++|.+.+. .|..|..+++|++|++++|.+.+..+..|.++++|++|+|
T Consensus 105 ~L~~L~Ls~n~i~~~-------------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 159 (477)
T 2id5_A 105 NLTKLDISENKIVIL-------------------------LDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 159 (477)
T ss_dssp TCCEEECTTSCCCEE-------------------------CTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEE
T ss_pred CCCEEECCCCccccC-------------------------ChhHccccccCCEEECCCCccceeChhhccCCCCCCEEEC
Confidence 777777777766543 3344566677777777777777666677777777777777
Q ss_pred ecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCC
Q 036011 405 YGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGS 484 (977)
Q Consensus 405 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 484 (977)
++|++++..+..+..+++|+.|++++|++.+..+..|..+++|++|++++|.+.+.+|.......+|+.|++++|++++.
T Consensus 160 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 239 (477)
T 2id5_A 160 EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAV 239 (477)
T ss_dssp ESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSC
T ss_pred CCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccccc
Confidence 77777766666677777777777777777766666777777777777777777666666666666788888888888765
Q ss_pred CccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccc
Q 036011 485 LPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEAL 564 (977)
Q Consensus 485 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 564 (977)
.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+
T Consensus 240 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 319 (477)
T 2id5_A 240 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSV 319 (477)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCG
T ss_pred CHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCC
Confidence 55677778888888888888876666677888888888888888887778888888888888888888886666677788
Q ss_pred cccCccccCCCcccccCCCCCCCCcCCCCCcccCccccCCC
Q 036011 565 LFLKQLNVSHNKLEGEIPANGPFKYFAPQSFSWNYALCGPT 605 (977)
Q Consensus 565 ~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg~~ 605 (977)
++|++|++++|+|.+..+-.+.+.......+.++...|+.|
T Consensus 320 ~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 320 GNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp GGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred cccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 88888888888887766532222222334456666677654
No 143
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.1e-37 Score=348.05 Aligned_cols=274 Identities=22% Similarity=0.364 Sum_probs=216.9
Q ss_pred HHHHHHhhcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHh--cCCCCcceEeeeeecCC
Q 036011 675 YLDIQRATDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRN--VRHRNLIKIFSSCCNND 752 (977)
Q Consensus 675 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~ 752 (977)
........++|++.+.||+|+||+||+|+. +|+.||||++... ....+.+|+++++. ++||||+++++++....
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 333445567899999999999999999998 5899999998644 23567788888887 78999999999998776
Q ss_pred ----eeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCceeeCCCCceE
Q 036011 753 ----FRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHG-----HSTPVVHCDLKPSNILLDEDMVAH 823 (977)
Q Consensus 753 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~k 823 (977)
..++||||+++|+|.+++.... +++..++.++.|++.||+|||.. ++.+|+||||||+||+++.++.+|
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred CccceeEEEEeecCCCcHHHHHhccC--ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence 7899999999999999997654 89999999999999999999932 257899999999999999999999
Q ss_pred EeecccccccCCCCCcc--eeeccccCCcccCccccCCC------CcCcccchhhHhHHHHHHhcC----------CCCC
Q 036011 824 VSDFGLSKLFDEGDDSV--TQTMTIATIGYMAPEYGTEG------IVSSKCDVYSYGVLLTETFTR----------KKPT 885 (977)
Q Consensus 824 l~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~ 885 (977)
|+|||++.......... ......||+.|+|||++.+. .++.++||||||+++|||++| ..||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 99999998776543221 12334699999999998765 345789999999999999999 7788
Q ss_pred CcCCcccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 886 DDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
............+.......... +.+ .......++...+.+++.+||+.+|++|||+.|++++|+++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 268 YDLVPSDPSVEEMRKVVCEQKLR----PNI----PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCC----CCC----CGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCcCcccHHHHHHHHHHHHhC----CCC----cccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 76555444444444332222111 111 0111123466778999999999999999999999999999874
No 144
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.6e-39 Score=354.23 Aligned_cols=274 Identities=24% Similarity=0.392 Sum_probs=212.1
Q ss_pred hcCCCcCccccCcceEEEEEEEe-----CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC--ee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-----SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND--FR 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~ 754 (977)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688899999999999999984 368999999998766666788999999999999999999999986644 78
Q ss_pred EEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 755 ALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
++||||+++++|.+++......+++..++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999887667999999999999999999999 7899999999999999999999999999998876
Q ss_pred CCCCcce-eeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCch-hhhcc
Q 036011 835 EGDDSVT-QTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGL-MEVVD 912 (977)
Q Consensus 835 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 912 (977)
....... .....++..|+|||++.+..++.++||||+|+++|||+||..|+..... .............. ...+.
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhhccccchhhhHHHHH
Confidence 5432211 2223577789999999888899999999999999999999998753210 00110000000000 00000
Q ss_pred hhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 913 TNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
..+. .....+....++..+.+++.+||+.+|++|||+.|+++.|++++.
T Consensus 274 ~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 274 ELLK-NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHH-TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhh-cCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0000 000001112245568899999999999999999999999998873
No 145
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=346.18 Aligned_cols=257 Identities=24% Similarity=0.396 Sum_probs=208.9
Q ss_pred cCCCcCc-cccCcceEEEEEEEeC---CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 683 DGFNECN-LLGRGSFGSVYKGTFS---DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 683 ~~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
++|.+.+ .||+|+||+||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4566666 8999999999999853 57889999997653 34567799999999999999999999999 45668999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999876667999999999999999999999 7899999999999999999999999999998775433
Q ss_pred Ccc-eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 838 DSV-TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 838 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....+......
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i~~~~~~---------- 232 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKRM---------- 232 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTTCCC----------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHhcCCcC----------
Confidence 221 1223346889999999988899999999999999999998 999997643221 11211111000
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
. .+..++..+.+++.+||+.+|++||++.|++++|+++..
T Consensus 233 -~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 233 -E------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp -C------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -C------CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 001234568899999999999999999999999988754
No 146
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-38 Score=357.04 Aligned_cols=253 Identities=22% Similarity=0.245 Sum_probs=194.5
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999999999976 79999999997543 2336688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc--eEEeecccccccCCCCC
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV--AHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~Dfgla~~~~~~~~ 838 (977)
+++|+|.+++...+ .+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 99999999987644 3899999999999999999999 789999999999999987765 9999999997543222
Q ss_pred cceeeccccCCcccCccccCCCCcCcc-cchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSK-CDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
......||+.|+|||++.+..++.+ +||||+||++|||++|+.||........ ............ ...
T Consensus 173 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~--------~~~ 241 (361)
T 3uc3_A 173 --QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVK--------YSI 241 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTC--------CCC
T ss_pred --CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCC--------CCC
Confidence 2233469999999999988877655 8999999999999999999976433222 222211111100 000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
+....+...+.+++.+||+.+|++|||+.|++++
T Consensus 242 -----~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 -----PDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -----CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -----CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0000123457899999999999999999999875
No 147
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.2e-38 Score=349.21 Aligned_cols=268 Identities=22% Similarity=0.323 Sum_probs=191.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch-hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD-RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999965 689999999876542 334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCC-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 760 LMPNGSLEKWLYSDN-----YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
|++ |+|.+++.... ..+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886532 34899999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh--CCCc-hhhh
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES--LPHG-LMEV 910 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~-~~~~ 910 (977)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+....... .... +...
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhh
Confidence 3322 2233468999999999876 468999999999999999999999997643322 122221110 0010 0000
Q ss_pred c-----chhhhccccC-c------hHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 911 V-----DTNLLRQEHT-S------SAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 911 ~-----~~~~~~~~~~-~------~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. .+.+...... . .........+.+++.+|++.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 0000000000 0 0000123468899999999999999999999764
No 148
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.5e-39 Score=356.07 Aligned_cols=262 Identities=25% Similarity=0.388 Sum_probs=211.7
Q ss_pred HHhhcCCCcCccccCcceEEEEEEEeC------CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC
Q 036011 679 QRATDGFNECNLLGRGSFGSVYKGTFS------DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN 751 (977)
Q Consensus 679 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 751 (977)
....++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 345678999999999999999999864 37889999987543 33456789999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhcCC---------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCce
Q 036011 752 DFRALVLELMPNGSLEKWLYSDN---------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVA 822 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 822 (977)
+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeE
Confidence 99999999999999999987532 24689999999999999999999 7899999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHh
Q 036011 823 HVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKE 901 (977)
Q Consensus 823 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 901 (977)
||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |..||......+ ....+..
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~ 255 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--VLRFVME 255 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--HHHHHHT
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH--HHHHHHc
Confidence 9999999987654332222233457889999999998899999999999999999999 888886542211 1111111
Q ss_pred hCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 902 SLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
. ...... ..++..+.+++.+||+.+|++|||+.|++++|+++..
T Consensus 256 ---~--------~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 256 ---G--------GLLDKP------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp ---T--------CCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred ---C--------CcCCCC------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 0 000000 1234457899999999999999999999999988754
No 149
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1e-39 Score=357.91 Aligned_cols=267 Identities=22% Similarity=0.374 Sum_probs=192.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHh--cCCCCcceEeeeeecCC----eeE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRN--VRHRNLIKIFSSCCNND----FRA 755 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~ 755 (977)
.++|.+.+.||+|+||+||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++.+.. ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 367999999999999999999874 899999998643 23556778888887 78999999999998766 789
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCceeeCCCCceEEeecccc
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHG-----HSTPVVHCDLKPSNILLDEDMVAHVSDFGLS 830 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 830 (977)
+||||+++|+|.+++.... +++..+..++.|++.||+|||.. |+.+|+||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHCC--BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhccC--cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 9999999999999997654 78889999999999999999932 2689999999999999999999999999999
Q ss_pred cccCCCCCcc--eeeccccCCcccCccccCCC------CcCcccchhhHhHHHHHHhcC----------CCCCCcCCccc
Q 036011 831 KLFDEGDDSV--TQTMTIATIGYMAPEYGTEG------IVSSKCDVYSYGVLLTETFTR----------KKPTDDMFTGE 892 (977)
Q Consensus 831 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~~~~~~ 892 (977)
+......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 8765443321 12234699999999998776 556789999999999999999 55554432221
Q ss_pred ccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 893 MSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
........ .+................++...+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 236 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 236 PSVEEMRK--------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCCC-CHH--------HHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred ccHHHHHH--------HHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 11111111 111111111111111223566779999999999999999999999999999874
No 150
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.3e-38 Score=347.02 Aligned_cols=264 Identities=25% Similarity=0.334 Sum_probs=201.6
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeecc---chhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQ---LDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35689999999999999999996 47999999998753 234557789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhc---CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 758 LELMPNGSLEKWLYS---DNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
|||+++|+|.+++.. ....+++..++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999864 3345899999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
.... ......|++.|+|||++.+..++.++||||||+++|||++|+.||................. ....
T Consensus 188 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~----- 257 (310)
T 2wqm_A 188 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC---DYPP----- 257 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT---CSCC-----
T ss_pred CCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc---cCCC-----
Confidence 4321 12234689999999999999999999999999999999999999975432221121111110 0000
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhcCcc
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKIIGVL 966 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~~~~ 966 (977)
. . ...+...+.+++.+||+.||++|||+.++++.|+++++....
T Consensus 258 ~---~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 258 L---P-----SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp C---C-----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred C---c-----ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 0 0 011234578999999999999999999999999999875443
No 151
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.4e-38 Score=352.54 Aligned_cols=250 Identities=22% Similarity=0.260 Sum_probs=203.1
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRA 755 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 755 (977)
..++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+..|.+++..+ +||+|+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999976 48899999998653 23456688899999988 8999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCC
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 835 (977)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999997654 3899999999999999999999 78999999999999999999999999999986432
Q ss_pred CCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 836 GDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 836 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ........ ..
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~------------~~ 238 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIMEH------------NV 238 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHC------------CC
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-HHHHHHhC------------CC
Confidence 22 12334579999999999999999999999999999999999999997532211 11111111 00
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHHH
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIY-----MTDAAVK 956 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~ev~~~ 956 (977)
... ......+.+++.+|++.+|++||+ +.|++++
T Consensus 239 ~~p-------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 239 AYP-------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CCC-------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCC-------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 000 012345789999999999999995 4666543
No 152
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.3e-38 Score=341.04 Aligned_cols=251 Identities=24% Similarity=0.318 Sum_probs=206.3
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
.++|++.+.||+|+||+||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 457899999999999999999975 5789999999876666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee---CCCCceEEeecccccccCCCC
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL---DEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~~ 837 (977)
+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++..+....
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999887654 3899999999999999999999 7899999999999999 788999999999998775433
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
......||+.|+|||++.+. ++.++||||+|+++|||++|+.||......+ ............
T Consensus 164 ---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~------------ 226 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIREGTFTF------------ 226 (277)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCC------------
T ss_pred ---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCC------------
Confidence 22334699999999998764 8999999999999999999999997643221 111111111100
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.......+...+.+++.+|++.||++|||+.|++++
T Consensus 227 ---~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 227 ---PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000111234567899999999999999999999763
No 153
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1e-38 Score=345.73 Aligned_cols=257 Identities=23% Similarity=0.348 Sum_probs=206.0
Q ss_pred hcCCCcCccccCcceEEEEEEEeCC----CCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSD----GTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
.++|.+.+.||+|+||+||+|++.. +..||||++.... ....+.+.+|++++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678899999999999999998642 3469999987653 3456779999999999999999999999865 45689
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++++|.+++......+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999876666899999999999999999999 789999999999999999999999999999876543
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
.. .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ............
T Consensus 167 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~~~~~~~--------- 234 (281)
T 3cc6_A 167 DY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLEKGDRLP--------- 234 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHHHTCCCC---------
T ss_pred cc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHhcCCCCC---------
Confidence 22 12233457889999999988899999999999999999998 999997543322 112111110000
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
. +..++..+.+++.+||+.+|++||++.|++++|+++..
T Consensus 235 --~------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 235 --K------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp --C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --C------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 0 01123457899999999999999999999999998864
No 154
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.6e-38 Score=350.04 Aligned_cols=261 Identities=26% Similarity=0.424 Sum_probs=198.7
Q ss_pred HhhcCCCcCccccCcceEEEEEEEeC----CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC-
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTFS----DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND- 752 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~- 752 (977)
...++|.+.+.||+|+||+||+|+.. .++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567889999999999999999864 34589999987553 344577899999999999999999999997755
Q ss_pred ----eeEEEEeccCCCCHHHHhhc-----CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceE
Q 036011 753 ----FRALVLELMPNGSLEKWLYS-----DNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAH 823 (977)
Q Consensus 753 ----~~~lv~e~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 823 (977)
..++||||+++|+|.+++.. ....+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEE
Confidence 34899999999999999853 2345899999999999999999999 89999999999999999999999
Q ss_pred EeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhh
Q 036011 824 VSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKES 902 (977)
Q Consensus 824 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 902 (977)
|+|||++................+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ ........
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~ 265 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYDYLLHG 265 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTT
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHHHHcC
Confidence 999999987755433333334457889999999999999999999999999999999 888887643221 11111111
Q ss_pred CCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 903 LPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.... ....++..+.+++.+||+.+|++|||+.+++++|+++..
T Consensus 266 ~~~~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 266 HRLK-----------------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp CCCC-----------------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC-----------------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0000 001234468899999999999999999999999998864
No 155
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7e-39 Score=360.21 Aligned_cols=258 Identities=25% Similarity=0.372 Sum_probs=197.0
Q ss_pred cCCCcCccccCcceEEEEEEEeC--C--CCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeec-CCeeEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS--D--GTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN-NDFRAL 756 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~--~--~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~l 756 (977)
..|.+.+.||+|+||+||+|+.. + +..||||++.... ....+.+.+|+.++++++||||+++++++.+ ++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 34667789999999999999863 2 2468999986543 3456789999999999999999999998754 567899
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999999887767899999999999999999999 789999999999999999999999999999876443
Q ss_pred CCc--ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcch
Q 036011 837 DDS--VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDT 913 (977)
Q Consensus 837 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (977)
... .......+|+.|+|||++.+..++.++|||||||++|||++ |.+||......+ ..........
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~~~~--------- 314 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGRR--------- 314 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHTTCC---------
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHcCCC---------
Confidence 221 12223457889999999999999999999999999999999 677776543222 2221111100
Q ss_pred hhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 914 NLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
... +..++..+.+++.+||+.+|++|||++|+++.|+++..
T Consensus 315 --~~~------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 315 --LLQ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp --CCC------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCC------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 000 01234468899999999999999999999999998764
No 156
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.8e-38 Score=355.97 Aligned_cols=255 Identities=27% Similarity=0.302 Sum_probs=196.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHH-HHhcCCCCcceEeeeeecCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEV-LRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
.++|++.+.||+|+||.||+|+.+ +++.||||++.+.. ......+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 367899999999999999999975 68899999997653 2233456667766 567899999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999997654 4889999999999999999999 789999999999999999999999999999864332
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
. ......+||+.|+|||++.+..++.++||||+||++|||++|..||......+ ........ ...
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~------------~~~ 257 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNK------------PLQ 257 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-HHHHHHHS------------CCC
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhc------------ccC
Confidence 2 12334579999999999999999999999999999999999999997542211 11111111 010
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
... .+...+.+++.+|++.||.+||++.+..+.+.+-..
T Consensus 258 ~~~-------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~ 296 (373)
T 2r5t_A 258 LKP-------NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296 (373)
T ss_dssp CCS-------SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGG
T ss_pred CCC-------CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcc
Confidence 001 123357889999999999999998655555444333
No 157
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.9e-38 Score=348.58 Aligned_cols=268 Identities=21% Similarity=0.276 Sum_probs=199.9
Q ss_pred hcCCCcC-ccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNEC-NLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.+.|++. +.||+|+||+||+|+.. +++.||||++........+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4568774 78999999999999964 7999999999876555567889999999985 7999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc---eEEeecccccccCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV---AHVSDFGLSKLFDE 835 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfgla~~~~~ 835 (977)
||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999997654 4899999999999999999999 789999999999999998776 99999999986643
Q ss_pred CCC-----cceeeccccCCcccCccccCC-----CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCC
Q 036011 836 GDD-----SVTQTMTIATIGYMAPEYGTE-----GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPH 905 (977)
Q Consensus 836 ~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (977)
... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+... .......
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~ 243 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW---DRGEACP 243 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CCH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccc---cccccch
Confidence 211 111223459999999998865 568999999999999999999999997654322110 0000000
Q ss_pred chhhhcchhhhccc-c-CchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 906 GLMEVVDTNLLRQE-H-TSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 906 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.....+...+.... . .......+...+.+++.+|++.||++|||+.|++++
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00000000000000 0 001111234568899999999999999999999875
No 158
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.4e-38 Score=350.78 Aligned_cols=261 Identities=21% Similarity=0.336 Sum_probs=212.3
Q ss_pred hhcCCCcCccccCcceEEEEEEEeCC------CCEEEEEEeeccc-hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCC
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFSD------GTSFAIKVFNLQL-DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNND 752 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 752 (977)
..++|.+.+.||+|+||+||+|+... +..||+|++.... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 35778999999999999999998642 3489999987653 34456789999999999 8999999999999999
Q ss_pred eeEEEEeccCCCCHHHHhhcCC-------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCC
Q 036011 753 FRALVLELMPNGSLEKWLYSDN-------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDED 819 (977)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~ 819 (977)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCC
Confidence 9999999999999999987532 24789999999999999999999 7899999999999999999
Q ss_pred CceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHH
Q 036011 820 MVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKW 898 (977)
Q Consensus 820 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~ 898 (977)
+.+||+|||++................+|+.|+|||++.+..++.++||||+|+++|||+| |..||.+..... .....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~ 279 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYKL 279 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHHH
Confidence 9999999999987755443333334557889999999988899999999999999999999 899987643322 12222
Q ss_pred HHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 899 VKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
......... + ..++..+.+++.+||+.+|.+|||+.|+++.|+++..
T Consensus 280 ~~~~~~~~~-----------~------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 280 VKDGYQMAQ-----------P------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHTCCCCC-----------C------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCC-----------C------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 222111100 0 0123457899999999999999999999999988763
No 159
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-38 Score=347.05 Aligned_cols=258 Identities=24% Similarity=0.372 Sum_probs=213.1
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
..++|++.+.||+|+||+||+|++. +++.||+|++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4567889999999999999999976 4889999998754 3345778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 760 LMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
|+++++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 999999999998643 35899999999999999999999 78999999999999999999999999999987764332
Q ss_pred cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
.......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||....... ............
T Consensus 167 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~~~~~~~~~~~----------- 232 (288)
T 3kfa_A 167 -TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDYRME----------- 232 (288)
T ss_dssp -EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTCCCC-----------
T ss_pred -ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhccCCCC-----------
Confidence 22333457889999999998899999999999999999999 999987643221 222111111100
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
....++..+.+++.+|++.+|.+|||+.|+++.|+++..
T Consensus 233 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 233 ------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 001223467899999999999999999999999987664
No 160
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6.5e-38 Score=361.54 Aligned_cols=248 Identities=27% Similarity=0.380 Sum_probs=205.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch---hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD---RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 367899999999999999999975 799999999976532 2356789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999997654 4899999999999999999999 8999999999999999999999999999998775432
Q ss_pred CcceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
. ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+..... ....+.. ....
T Consensus 171 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~--~~~~i~~-----------~~~~ 234 (476)
T 2y94_A 171 F---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT--LFKKICD-----------GIFY 234 (476)
T ss_dssp C---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH--HHHHHHT-----------TCCC
T ss_pred c---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH--HHHHHhc-----------CCcC
Confidence 2 233569999999999988765 789999999999999999999997643211 1111110 0000
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. +. .+...+.+++.+||+.||.+|||+.|++++
T Consensus 235 ~-p~------~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 T-PQ------YLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp C-CT------TCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred C-Cc------cCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0 00 123357889999999999999999999874
No 161
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3e-38 Score=353.14 Aligned_cols=261 Identities=23% Similarity=0.299 Sum_probs=203.9
Q ss_pred HHHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-----hhhHHHHHHHHHHHHhcCCCCcceEeeeeec
Q 036011 677 DIQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-----DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN 750 (977)
Q Consensus 677 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 750 (977)
++....++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34556788999999999999999999974 68899999987552 3445779999999999999999999999999
Q ss_pred CCeeEEEEeccCCCCHHHHhhcC---------------------------------------CccCCHHHHHHHHHHHHH
Q 036011 751 NDFRALVLELMPNGSLEKWLYSD---------------------------------------NYFLDLLERLNIMIGVAL 791 (977)
Q Consensus 751 ~~~~~lv~e~~~~gsL~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~ 791 (977)
.+..++||||+++|+|.+++... ...+++..+..++.||++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 112357788899999999
Q ss_pred HHHHHHhcCCCCeEeCCCCCCceeeCCCC--ceEEeecccccccCCCCCc--ceeeccccCCcccCccccCC--CCcCcc
Q 036011 792 ALEYLHHGHSTPVVHCDLKPSNILLDEDM--VAHVSDFGLSKLFDEGDDS--VTQTMTIATIGYMAPEYGTE--GIVSSK 865 (977)
Q Consensus 792 ~L~~LH~~~~~~ivH~dlk~~NIll~~~~--~~kl~Dfgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~ 865 (977)
||+||| +.+|+||||||+||+++.++ .+||+|||+++.+...... .......||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999 78999999999999998776 8999999999876432221 12334569999999999865 678999
Q ss_pred cchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCC
Q 036011 866 CDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPD 945 (977)
Q Consensus 866 ~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~ 945 (977)
+||||+||++|||++|+.||......+. ........... ..+....+...+.+++.+||+.+|.
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~---------------~~~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADT-ISQVLNKKLCF---------------ENPNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCT---------------TSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHhccccc---------------CCcccccCCHHHHHHHHHHcCCChh
Confidence 9999999999999999999976433221 11111111100 0011112344578999999999999
Q ss_pred CCCCHHHHHHH
Q 036011 946 QRIYMTDAAVK 956 (977)
Q Consensus 946 ~RPs~~ev~~~ 956 (977)
+||++.|++++
T Consensus 321 ~Rps~~~~l~h 331 (345)
T 3hko_A 321 ERFDAMRALQH 331 (345)
T ss_dssp TSCCHHHHHHS
T ss_pred HCCCHHHHhcC
Confidence 99999999874
No 162
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.8e-38 Score=340.50 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=205.5
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++.+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578999999999999999999875 68999999987653 344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc---eEEeecccccccCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV---AHVSDFGLSKLFDE 835 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfgla~~~~~ 835 (977)
||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999998887654 4899999999999999999999 789999999999999986655 99999999987654
Q ss_pred CCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 836 GDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 836 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||......+ .............
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~--------- 227 (284)
T 3kk8_A 161 SEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYP--------- 227 (284)
T ss_dssp SCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCC---------
T ss_pred Ccc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHHHhccccCC---------
Confidence 322 233569999999999999999999999999999999999999996532211 1111111111000
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
......+...+.+++.+|++.+|++|||+.|++++
T Consensus 228 ------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 228 ------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ------TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ------chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00011223457899999999999999999999874
No 163
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.4e-38 Score=349.06 Aligned_cols=249 Identities=22% Similarity=0.290 Sum_probs=193.9
Q ss_pred hcCCCcCccccCcceEEEEEEEe----CCCCEEEEEEeeccc----hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF----SDGTSFAIKVFNLQL----DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 753 (977)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 478999999987642 2334567899999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999997654 4889999999999999999999 789999999999999999999999999999864
Q ss_pred CCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcch
Q 036011 834 DEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDT 913 (977)
Q Consensus 834 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (977)
..... .....+||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ .........
T Consensus 172 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~----------- 237 (327)
T 3a62_A 172 IHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TIDKILKCK----------- 237 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTC-----------
T ss_pred ccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCC-----------
Confidence 33221 2234569999999999999999999999999999999999999997642211 111111110
Q ss_pred hhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 036011 914 NLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRI-----YMTDAAVK 956 (977)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~ev~~~ 956 (977)
.... ..+...+.+++.+||+.+|++|| ++.|++++
T Consensus 238 -~~~p-------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 -LNLP-------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -CCCC-------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -CCCC-------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0000 01234578999999999999999 67777653
No 164
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.7e-38 Score=359.04 Aligned_cols=270 Identities=24% Similarity=0.330 Sum_probs=194.4
Q ss_pred HhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcC-CCCcceEeeeeecCC--e
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVR-HRNLIKIFSSCCNND--F 753 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 753 (977)
...++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999864 79999999986442 344567889999999997 999999999997544 6
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.++||||++ |+|.+++... .+++..+..++.|++.||+||| +.||+||||||+|||++.++.+||+|||+++.+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999997 6999999764 4899999999999999999999 789999999999999999999999999999876
Q ss_pred CCCC-------------------CcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc
Q 036011 834 DEGD-------------------DSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM 893 (977)
Q Consensus 834 ~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 893 (977)
.... .....+..+||++|+|||++.+ ..++.++||||+||++|||++|+.||.+....+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~- 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN- 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 4311 1112233579999999999876 679999999999999999999999997643221
Q ss_pred cHHHHHHhh-CCCc--hhhh-------cchhhhcc--------ccCchH----------HHHHHHHHHHHHHHhhcCCCC
Q 036011 894 SLKKWVKES-LPHG--LMEV-------VDTNLLRQ--------EHTSSA----------EMDCLLSVLHLALDCCMESPD 945 (977)
Q Consensus 894 ~~~~~~~~~-~~~~--~~~~-------~~~~~~~~--------~~~~~~----------~~~~~~~l~~l~~~cl~~~P~ 945 (977)
.+....... .+.. +..+ ....+... ....+. ...+...+.+++.+||+.||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 122211110 0100 0000 00000000 000000 002244678999999999999
Q ss_pred CCCCHHHHHHH
Q 036011 946 QRIYMTDAAVK 956 (977)
Q Consensus 946 ~RPs~~ev~~~ 956 (977)
+|||++|++++
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999887
No 165
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.6e-38 Score=345.87 Aligned_cols=259 Identities=25% Similarity=0.375 Sum_probs=204.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeCC----CCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeee-ecCCeeE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSD----GTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSC-CNNDFRA 755 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~ 755 (977)
...|++.+.||+|+||+||+|+..+ +..||+|++.... ....+.+.+|++++++++||||+++++++ ..++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3568888999999999999998642 2368999987543 34457789999999999999999999986 4566789
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCC
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 835 (977)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999877667899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCc--ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcC-CCCCCcCCcccccHHHHHHhhCCCchhhhcc
Q 036011 836 GDDS--VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTR-KKPTDDMFTGEMSLKKWVKESLPHGLMEVVD 912 (977)
Q Consensus 836 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (977)
.... .......+|+.|+|||.+.+..++.++||||+|+++|||++| .+||......+ ...........
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~------- 251 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGRRL------- 251 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHHHHHTTCCC-------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhcCCCC-------
Confidence 3211 122334578899999999999999999999999999999995 55554432221 11111111000
Q ss_pred hhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 913 TNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
..+ ..++..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 252 ----~~~------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 252 ----LQP------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp ----CCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCC------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 000 1123457899999999999999999999999998864
No 166
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.4e-38 Score=344.33 Aligned_cols=256 Identities=23% Similarity=0.411 Sum_probs=208.5
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
.++|++.+.||+|+||+||+|+..+++.||||++.... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 46788899999999999999998888899999987543 235678999999999999999999999864 5688999999
Q ss_pred CCCCHHHHhhcCCc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcc
Q 036011 762 PNGSLEKWLYSDNY-FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 762 ~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 840 (977)
++++|.+++..... .+++..+..++.|+++||+||| +.||+||||||+||++++++.+||+|||++........ .
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-T 165 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-E
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-c
Confidence 99999999976432 5899999999999999999999 78999999999999999999999999999987754321 1
Q ss_pred eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccc
Q 036011 841 TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQE 919 (977)
Q Consensus 841 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (977)
......+++.|+|||++.++.++.++||||+|+++|||++ |+.||......+ ........... ..
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~~~~-----------~~- 231 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM-----------VR- 231 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCCC-----------CC-
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHHHhcccCC-----------CC-
Confidence 2223347788999999988899999999999999999999 899987542211 11111111000 00
Q ss_pred cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 920 HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...++..+.+++.+|++.+|++|||+.++++.|+++..
T Consensus 232 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 232 -----PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 01233467899999999999999999999999998864
No 167
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.9e-38 Score=338.76 Aligned_cols=250 Identities=23% Similarity=0.372 Sum_probs=185.8
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccch---hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLD---RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|.+.+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46789999999999999999996 4799999999975432 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999887667999999999999999999999 7899999999999999999999999999998765332
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+. . ..+.......
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~------------~~~~~~~~~~ 231 (278)
T 3cok_A 167 E--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-L------------NKVVLADYEM 231 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSSCCCC
T ss_pred C--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-H------------HHHhhcccCC
Confidence 2 12234689999999999999999999999999999999999999975432211 0 0000000000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. ..+...+.+++.+||+.||++|||++|++++
T Consensus 232 ~-------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 232 P-------SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp C-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c-------cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0 0123457899999999999999999999764
No 168
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=354.29 Aligned_cols=264 Identities=17% Similarity=0.190 Sum_probs=202.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC----CCCEEEEEEeeccchh-----------hHHHHHHHHHHHHhcCCCCcceEee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS----DGTSFAIKVFNLQLDR-----------AFRSFDSECEVLRNVRHRNLIKIFS 746 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~ 746 (977)
.++|.+.+.||+|+||+||+|+.. .+..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999975 5789999998765321 1234668889999999999999999
Q ss_pred eeec----CCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC--
Q 036011 747 SCCN----NDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM-- 820 (977)
Q Consensus 747 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~-- 820 (977)
++.+ ....++||||+ +++|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9987 67889999999 999999998765 5899999999999999999999 78999999999999999877
Q ss_pred ceEEeecccccccCCCCCc-----ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccH
Q 036011 821 VAHVSDFGLSKLFDEGDDS-----VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSL 895 (977)
Q Consensus 821 ~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 895 (977)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876532211 11133469999999999999999999999999999999999999996533322222
Q ss_pred HHHHHh---hCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 896 KKWVKE---SLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 896 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...... ..+........ ...++..+.+++.+||+.+|++||++.++++.|+++..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAP------------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSC------------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHhhcccccHHHHhhcc------------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 221111 11111100000 00234468899999999999999999999999988764
No 169
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.4e-38 Score=348.63 Aligned_cols=249 Identities=23% Similarity=0.332 Sum_probs=181.5
Q ss_pred CccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-CCCcceEeeeeecCCeeEEEEeccCCCC
Q 036011 688 CNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-HRNLIKIFSSCCNNDFRALVLELMPNGS 765 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 765 (977)
.+.||+|+||+||+|+.. +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 378999999999999975 6899999998754 3456788999999997 9999999999999999999999999999
Q ss_pred HHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC---ceEEeecccccccCCCCCccee
Q 036011 766 LEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM---VAHVSDFGLSKLFDEGDDSVTQ 842 (977)
Q Consensus 766 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~Dfgla~~~~~~~~~~~~ 842 (977)
|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++....... ..
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~ 166 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PL 166 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--cc
Confidence 999998765 4899999999999999999999 78999999999999998665 899999999987654322 22
Q ss_pred eccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCccc--ccHHHHHHhhCCCchhhhcchhhhcccc
Q 036011 843 TMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGE--MSLKKWVKESLPHGLMEVVDTNLLRQEH 920 (977)
Q Consensus 843 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (977)
...+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......... ..+ .. ..
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i-~~~-------~~---~~ 235 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI-KKG-------DF---SF 235 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHH-TTT-------CC---CC
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHH-HcC-------CC---CC
Confidence 34568999999999999999999999999999999999999997643211 1111111110 000 00 01
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 921 TSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.......+...+.+++.+|++.||.+|||++|++++
T Consensus 236 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 112223345668899999999999999999998754
No 170
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.8e-38 Score=347.62 Aligned_cols=263 Identities=26% Similarity=0.392 Sum_probs=208.0
Q ss_pred CCcCccccCcceEEEEEEEeC-----CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeec--CCeeEE
Q 036011 685 FNECNLLGRGSFGSVYKGTFS-----DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN--NDFRAL 756 (977)
Q Consensus 685 ~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 756 (977)
|++.+.||+|+||+||++.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999988653 58899999998654 3446779999999999999999999999987 467889
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++.... +++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997765 899999999999999999999 789999999999999999999999999999987654
Q ss_pred CCcc-eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc------hhh
Q 036011 837 DDSV-TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG------LME 909 (977)
Q Consensus 837 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~ 909 (977)
.... ......+|+.|+|||++.+..++.++||||+|+++|||++|+.||........ .+ ...... ..+
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~---~~--~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL---EL--IGIAQGQMTVLRLTE 262 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH---HH--HCSCCHHHHHHHHHH
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh---hh--hcccccchhHHHHHH
Confidence 3321 22334588889999999998999999999999999999999999864321100 00 000000 011
Q ss_pred hcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 910 VVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.+.... .......++..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 263 ~~~~~~-----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 263 LLERGE-----RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHHTTC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhccc-----CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 111110 011112344568999999999999999999999999998864
No 171
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=348.43 Aligned_cols=243 Identities=22% Similarity=0.303 Sum_probs=203.3
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch--------hhHHHHHHHHHHHHhcCCCCcceEeeeeecC
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD--------RAFRSFDSECEVLRNVRHRNLIKIFSSCCNN 751 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 751 (977)
..++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4567999999999999999999864 789999999876531 1344678899999999999999999999999
Q ss_pred CeeEEEEeccCCC-CHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccc
Q 036011 752 DFRALVLELMPNG-SLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLS 830 (977)
Q Consensus 752 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 830 (977)
+..++||||+.+| +|.+++..... +++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCC-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 99999977654 899999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCcceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhh
Q 036011 831 KLFDEGDDSVTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLME 909 (977)
Q Consensus 831 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (977)
+....... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||......
T Consensus 178 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------ 236 (335)
T 3dls_A 178 AYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------ 236 (335)
T ss_dssp EECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------
T ss_pred eECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------
Confidence 87765432 223469999999999988876 88999999999999999999999652110
Q ss_pred hcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 910 VVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
........ . .+...+.+++.+||+.||++|||+.|++++
T Consensus 237 -~~~~~~~~-~------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -VEAAIHPP-Y------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -TTTCCCCS-S------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -HhhccCCC-c------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001000 0 123457899999999999999999999886
No 172
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=378.61 Aligned_cols=254 Identities=24% Similarity=0.387 Sum_probs=202.3
Q ss_pred CCcCc-cccCcceEEEEEEEeC---CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 685 FNECN-LLGRGSFGSVYKGTFS---DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 685 ~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
+.+.+ .||+|+||+||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E 415 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 415 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEE
Confidence 33334 7999999999999864 46679999997653 3456789999999999999999999999976 56899999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 416 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 416 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred eCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 99999999999877667999999999999999999999 789999999999999999999999999999877543322
Q ss_pred c-eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 840 V-TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 840 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
. ......+++.|+|||++.++.++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~------------- 557 (613)
T 2ozo_A 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKR------------- 557 (613)
T ss_dssp ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHHHHTTCC-------------
T ss_pred eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCC-------------
Confidence 1 1222346789999999998999999999999999999998 999997653322 1121111100
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
...+..++..+.+++.+||+.+|++||++.++++.|+.+-
T Consensus 558 ----~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 558 ----MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp ----CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 0001124556899999999999999999999999998864
No 173
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=344.40 Aligned_cols=267 Identities=21% Similarity=0.260 Sum_probs=200.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch--hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD--RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367999999999999999999975 599999999865432 33566889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||+++++|.+++.... .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 82 e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 9999999999887554 4899999999999999999999 78999999999999999999999999999987653322
Q ss_pred cceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCC---chhhhcch-
Q 036011 839 SVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPH---GLMEVVDT- 913 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~- 913 (977)
......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||......+. ... +...... ........
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 158 --YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYL-IRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH-HHHHHCSCCHHHHHHHHTC
T ss_pred --ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-HHHHhcccccccccccccc
Confidence 2233468999999998875 6789999999999999999999999976433221 111 1111000 00000000
Q ss_pred ------hhhccccC---chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 914 ------NLLRQEHT---SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 914 ------~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
........ ......+...+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000 00001234557899999999999999999999865
No 174
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.1e-38 Score=346.02 Aligned_cols=252 Identities=23% Similarity=0.306 Sum_probs=205.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchh------hHHHHHHHHHHHHhcCCCCcceEeeeeecCCee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDR------AFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFR 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 754 (977)
.++|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456899999999999999999975 6899999998765321 356789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC----ceEEeecccc
Q 036011 755 ALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM----VAHVSDFGLS 830 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfgla 830 (977)
++||||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999999997654 4899999999999999999999 78999999999999999888 7999999999
Q ss_pred cccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhh
Q 036011 831 KLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEV 910 (977)
Q Consensus 831 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (977)
........ .....||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ ...........
T Consensus 167 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~------ 236 (321)
T 2a2a_A 167 HEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANITSVSYD------ 236 (321)
T ss_dssp EECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTCCC------
T ss_pred eecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhcccc------
Confidence 87754322 233469999999999999999999999999999999999999997542211 11111110000
Q ss_pred cchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 911 VDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.++ .........+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 237 FDE---------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCH---------HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cCh---------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0011223457899999999999999999999874
No 175
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.6e-38 Score=338.17 Aligned_cols=248 Identities=25% Similarity=0.328 Sum_probs=201.5
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
+.++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3567999999999999999999865 57899999987543 2234668899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999987654 3899999999999999999999 899999999999999999999999999998655432
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
. .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||......+ .......... ..
T Consensus 163 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~--~~--------- 226 (279)
T 3fdn_A 163 R----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISRVEF--TF--------- 226 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCC--CC---------
T ss_pred c----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-HHHHHHhCCC--CC---------
Confidence 2 223468999999999999999999999999999999999999997532211 1111100000 00
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
+ ..+...+.+++.+||+.+|++|||+.|++++
T Consensus 227 --~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 --P------DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --C------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --C------CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 0123357889999999999999999999875
No 176
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7e-38 Score=338.08 Aligned_cols=247 Identities=26% Similarity=0.371 Sum_probs=181.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 367999999999999999999864 78999999987543 23356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+ ++++.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 678888877654 4899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
. .....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||....... ...........
T Consensus 167 ~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~----------- 230 (275)
T 2eue_A 167 F---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LFKNISNGVYT----------- 230 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCCC-----------
T ss_pred c---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCCC-----------
Confidence 2 223469999999999988765 789999999999999999999997532211 11111110000
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+ ..+...+.+++.+|++.||.+|||++|++++
T Consensus 231 -~~------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 -LP------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CC------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -CC------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 00 0123457899999999999999999999764
No 177
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.9e-37 Score=338.59 Aligned_cols=262 Identities=19% Similarity=0.228 Sum_probs=209.2
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeee-ecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSC-CNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|+++++.++|++++..++++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 57899999999999999999996 5799999999875432 35688999999999988877666655 66778899999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee---CCCCceEEeecccccccCCC
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL---DEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~ 836 (977)
|+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 89999999866667999999999999999999999 7899999999999999 48899999999999877654
Q ss_pred CCcc-----eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCccc--ccHHHHHHhhCCCchhh
Q 036011 837 DDSV-----TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGE--MSLKKWVKESLPHGLME 909 (977)
Q Consensus 837 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 909 (977)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ................
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE- 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH-
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH-
Confidence 3211 1234569999999999999999999999999999999999999997643221 1111211111110000
Q ss_pred hcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhc
Q 036011 910 VVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKII 963 (977)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~ 963 (977)
.....++..+.+++.+||+.+|++|||++++++.|+++...
T Consensus 241 -------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 241 -------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp -------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred -------------HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 00012345688999999999999999999999999887643
No 178
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.1e-38 Score=351.41 Aligned_cols=259 Identities=23% Similarity=0.368 Sum_probs=205.4
Q ss_pred hcCCCcCccccCcceEEEEEEEe------CCCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF------SDGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFR 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 754 (977)
.++|++.+.||+|+||+||+|++ .+++.||||++.... ......+.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46799999999999999999984 257799999987443 34556789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCC------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC---CCceEEe
Q 036011 755 ALVLELMPNGSLEKWLYSDN------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE---DMVAHVS 825 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~ 825 (977)
++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998654 34889999999999999999999 789999999999999994 4469999
Q ss_pred ecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCC
Q 036011 826 DFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLP 904 (977)
Q Consensus 826 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (977)
|||++................+|+.|+|||++.+..++.++||||+|+++|||++ |..||...... ....++.....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~ 263 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGR 263 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHHhcCCC
Confidence 9999986654433333344568899999999988899999999999999999998 99998653221 11111111100
Q ss_pred CchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 905 HGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.. . ...++..+.+++.+||+.+|.+||++.|++++++.+..
T Consensus 264 ~~-----------~------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 264 MD-----------P------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp CC-----------C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-----------C------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 00 0 01223457899999999999999999999999988764
No 179
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=357.29 Aligned_cols=275 Identities=21% Similarity=0.268 Sum_probs=213.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC--eeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND--FRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 757 (977)
.++|.+.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357899999999999999999976 59999999997543 334567889999999999999999999998755 67999
Q ss_pred EeccCCCCHHHHhhcCCc--cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee----CCCCceEEeeccccc
Q 036011 758 LELMPNGSLEKWLYSDNY--FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL----DEDMVAHVSDFGLSK 831 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Dfgla~ 831 (977)
|||+++|+|.+++..... .+++..++.++.||+.||+||| +.||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999976443 3899999999999999999999 7899999999999999 788889999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccCC--------CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHH---HHHH
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTE--------GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLK---KWVK 900 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~---~~~~ 900 (977)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........... ....
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 765432 2223469999999998764 5788999999999999999999999975433222221 2222
Q ss_pred hhCCCchhhh---cchhhhc---cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 901 ESLPHGLMEV---VDTNLLR---QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 901 ~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...+..+..+ ....+.. .+........+...+.+++.+||+.||++||+++|+++.++++-.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 1111111111 0000000 001112224566778899999999999999999999999987654
No 180
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=340.29 Aligned_cols=258 Identities=23% Similarity=0.320 Sum_probs=205.7
Q ss_pred CCCcCccccCcceEEEEEEEeC-C---CCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCee-EEE
Q 036011 684 GFNECNLLGRGSFGSVYKGTFS-D---GTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFR-ALV 757 (977)
Q Consensus 684 ~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv 757 (977)
.|...++||+|+||+||+|++. + +..||+|++.... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999853 2 2379999987543 34567789999999999999999999999776655 899
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+.+|+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999886667899999999999999999999 7899999999999999999999999999998664322
Q ss_pred C--cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 838 D--SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 838 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
. ........+|+.|+|||...+..++.++||||+|+++|||++|..|+...... ...............
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~-------- 249 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQGRRLPQ-------- 249 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTTCCCCC--------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcCCCCCC--------
Confidence 1 11223345788999999999999999999999999999999966665432222 222222221111000
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...++..+.+++.+||+.+|.+|||+.++++.|+++..
T Consensus 250 ---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 250 ---------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 01123457899999999999999999999999998864
No 181
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1e-37 Score=340.76 Aligned_cols=263 Identities=19% Similarity=0.235 Sum_probs=205.7
Q ss_pred HhhcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeee-ecCCeeEEE
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSC-CNNDFRALV 757 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv 757 (977)
...++|++.+.||+|+||+||+|+. .+++.||||++.... ..+.+.+|+++++.++|++++..++++ .+.+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 3457899999999999999999996 578999999876443 235688999999999988877776655 667788999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee---CCCCceEEeecccccccC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL---DEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~ 834 (977)
|||+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 99999999876666999999999999999999999 7899999999999999 788999999999998876
Q ss_pred CCCCcc-----eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCccc--ccHHHHHHhhCCCch
Q 036011 835 EGDDSV-----TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGE--MSLKKWVKESLPHGL 907 (977)
Q Consensus 835 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~ 907 (977)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...............
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 543211 2224569999999999999999999999999999999999999997643321 111111111110000
Q ss_pred hhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 908 MEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
. .....++..+.+++.+||+.+|++|||++++++.|+++..
T Consensus 240 ~--------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 240 E--------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp H--------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred h--------------hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 0 0001224568899999999999999999999999988764
No 182
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.3e-38 Score=343.91 Aligned_cols=268 Identities=25% Similarity=0.323 Sum_probs=200.9
Q ss_pred hhcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccch-----hhHHHHHHHHHHHHhcC---CCCcceEeeeeecC
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLD-----RAFRSFDSECEVLRNVR---HRNLIKIFSSCCNN 751 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 751 (977)
..++|++.+.||+|+||+||+|+. .+++.||||++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999996 4789999999875431 12345667777777664 99999999999775
Q ss_pred C-----eeEEEEeccCCCCHHHHhhcCCc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEe
Q 036011 752 D-----FRALVLELMPNGSLEKWLYSDNY-FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVS 825 (977)
Q Consensus 752 ~-----~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 825 (977)
. ..++||||+. |+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 5 5789999997 599999987543 4899999999999999999999 7899999999999999999999999
Q ss_pred ecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh-C-
Q 036011 826 DFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES-L- 903 (977)
Q Consensus 826 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~- 903 (977)
|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ......... .
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred eCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 999998765332 2234569999999999999999999999999999999999999997643222 222222111 0
Q ss_pred CC-chhhhc---chhhhccccC--chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 904 PH-GLMEVV---DTNLLRQEHT--SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 904 ~~-~~~~~~---~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
+. .+.... ...+...... .....++...+.+++.+|++.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00 010000 0000000000 00011234567899999999999999999999864
No 183
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.4e-38 Score=341.42 Aligned_cols=250 Identities=28% Similarity=0.332 Sum_probs=197.5
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
++|.+.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56889999999999999999964 68999999987654 23457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcC---CccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee---CCCCceEEeecccccccC
Q 036011 761 MPNGSLEKWLYSD---NYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL---DEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 761 ~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~ 834 (977)
+++|+|.+++... ...+++..+..++.|+++||+||| +.||+||||||+||++ +.++.+||+|||++..+.
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988643 245899999999999999999999 7899999999999999 456889999999998765
Q ss_pred CCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
... ......||+.|+|||++. +.++.++||||+|+++|||++|+.||......+. ........+.
T Consensus 179 ~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~~~~~~~~--------- 243 (285)
T 3is5_A 179 SDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQKATYKEPN--------- 243 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHCCCC---------
T ss_pred Ccc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--HhhhccCCcc---------
Confidence 432 223356999999999876 5689999999999999999999999976432211 1111110000
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..... ......+.+++.+|++.||++|||+.|++++
T Consensus 244 ~~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 244 YAVEC------RPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CCC--------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ccccc------CcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0123457899999999999999999999863
No 184
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=7.5e-38 Score=348.79 Aligned_cols=246 Identities=26% Similarity=0.327 Sum_probs=200.5
Q ss_pred cCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
+.|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4488889999999999999996 478999999987542 334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||+. |++.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 6888888765566999999999999999999999 789999999999999999999999999999876432
Q ss_pred cceeeccccCCcccCccccC---CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 839 SVTQTMTIATIGYMAPEYGT---EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
....||+.|+|||++. .+.++.++|||||||++|||++|+.||......+ ..........+. .
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~---------~ 273 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPA---------L 273 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCC---------C
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCC---------C
Confidence 2246999999999873 5779999999999999999999999986542211 111111110000 0
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. ...+...+.+++.+||+.+|++|||+.+++++
T Consensus 274 ~--------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 274 Q--------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp C--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred C--------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 00123457889999999999999999999764
No 185
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.1e-38 Score=342.86 Aligned_cols=257 Identities=25% Similarity=0.386 Sum_probs=205.3
Q ss_pred hcCCCcCc-cccCcceEEEEEEEe---CCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeE
Q 036011 682 TDGFNECN-LLGRGSFGSVYKGTF---SDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRA 755 (977)
Q Consensus 682 ~~~~~~~~-~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 755 (977)
.++|.+.+ .||+|+||+||+|.+ ..++.||||++.... ....+.+.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 999999999999964 247889999987553 23357799999999999999999999999 566788
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCC
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 835 (977)
+||||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 94 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999998754 3899999999999999999999 78999999999999999999999999999987755
Q ss_pred CCCcc-eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcch
Q 036011 836 GDDSV-TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDT 913 (977)
Q Consensus 836 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (977)
..... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+.......
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~------- 240 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGERMG------- 240 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCCC-------
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCCC-------
Confidence 43322 1222346788999999988889999999999999999999 99999764321 1111111110000
Q ss_pred hhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 914 NLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.+..++..+.+++.+||+.||++||++.|+++.|+++-.
T Consensus 241 ----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 241 ----------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp ----------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 001234568899999999999999999999999988764
No 186
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.9e-38 Score=343.04 Aligned_cols=251 Identities=28% Similarity=0.411 Sum_probs=199.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecC-CeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN-DFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 760 (977)
.++|++.+.||+|+||+||+|+. .|+.||||++.... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 46788999999999999999987 48899999987543 456789999999999999999999987554 578999999
Q ss_pred cCCCCHHHHhhcCCc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 761 MPNGSLEKWLYSDNY-FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
+++|+|.+++..... .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999999976543 3789999999999999999999 7899999999999999999999999999998654322
Q ss_pred ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
....+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....+..... ..
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~~~~~~------------~~ 234 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYK------------MD 234 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHHTTTCC------------CC
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhcCCC------------CC
Confidence 12347889999999988899999999999999999998 999987643221 1111111000 00
Q ss_pred ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 919 EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
....++..+.+++.+||+.+|++||++.|+++.|++++.
T Consensus 235 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 235 -----APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 001234467899999999999999999999999999885
No 187
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.4e-38 Score=352.45 Aligned_cols=252 Identities=17% Similarity=0.134 Sum_probs=204.8
Q ss_pred hhcCCCcCccccCcceEEEEEEE------eCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcC---CCCcceEeeeeecC
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGT------FSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR---HRNLIKIFSSCCNN 751 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 751 (977)
..++|.+.+.||+|+||+||+|+ ..+++.||||++.... ..++.+|+++++.++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 35679999999999999999994 3468999999987543 346777888888886 99999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhc----CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC---------
Q 036011 752 DFRALVLELMPNGSLEKWLYS----DNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE--------- 818 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~--------- 818 (977)
+..++||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.||+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999975 3345999999999999999999999 899999999999999998
Q ss_pred --CCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHH
Q 036011 819 --DMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLK 896 (977)
Q Consensus 819 --~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~ 896 (977)
++.+||+|||+|+.+............+||++|+|||++.+..++.++|||||||++|||+||+.||.....+...
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-- 294 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-- 294 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE--
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee--
Confidence 8999999999998765443444455567999999999999999999999999999999999999998543222110
Q ss_pred HHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCC-CCHHHHHHHHHchhh
Q 036011 897 KWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQR-IYMTDAAVKLKKIKI 962 (977)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R-Ps~~ev~~~L~~~~~ 962 (977)
....+. ... ....+.+++..|++.+|.+| |+++++.+.|++.-.
T Consensus 295 --------------~~~~~~-~~~-------~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 295 --------------PEGLFR-RLP-------HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp --------------ECSCCT-TCS-------SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred --------------echhcc-ccC-------cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 000000 000 12345678899999999998 578888888877653
No 188
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=9.1e-38 Score=357.40 Aligned_cols=254 Identities=24% Similarity=0.294 Sum_probs=195.1
Q ss_pred HhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--------hhhHHHHHHHHHHHHhcCCCCcceEeeeeec
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--------DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN 750 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 750 (977)
...++|.+.+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999865 68999999987542 1223358899999999999999999999854
Q ss_pred CCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC---ceEEeec
Q 036011 751 NDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM---VAHVSDF 827 (977)
Q Consensus 751 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~Df 827 (977)
+..++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 55789999999999999887654 4899999999999999999999 78999999999999997544 5999999
Q ss_pred ccccccCCCCCcceeeccccCCcccCccccC---CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCC
Q 036011 828 GLSKLFDEGDDSVTQTMTIATIGYMAPEYGT---EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLP 904 (977)
Q Consensus 828 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (977)
|+++...... .....+||+.|+|||++. ...++.++||||+||++|||++|+.||....... ...........
T Consensus 287 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~~~~ 362 (419)
T 3i6u_A 287 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKY 362 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHTTCC
T ss_pred ccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhcCCC
Confidence 9998765422 223456999999999975 3678899999999999999999999997643322 22222211111
Q ss_pred CchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 905 HGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.. .......+...+.+++.+|++.||++|||++|++++
T Consensus 363 ~~--------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 363 NF--------------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CC--------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CC--------------CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00 001111234567899999999999999999999874
No 189
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.9e-38 Score=343.56 Aligned_cols=259 Identities=20% Similarity=0.256 Sum_probs=200.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999975 68999999987553 23346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999997654 4899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
. .......|++.|+|||++.+..++.++||||+|+++|||++|+.||...... ..........+..
T Consensus 189 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~----------- 254 (309)
T 2h34_A 189 L-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPRP----------- 254 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCCG-----------
T ss_pred c-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCCc-----------
Confidence 2 1223346899999999999999999999999999999999999999753221 1111111111100
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHHHchhh
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRI-YMTDAAVKLKKIKI 962 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~ev~~~L~~~~~ 962 (977)
......++..+.+++.+||+.+|++|| ++.++++.|++.-.
T Consensus 255 ----~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 255 ----STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp ----GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred ----cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 000112234578899999999999999 99999999987653
No 190
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-37 Score=349.60 Aligned_cols=207 Identities=25% Similarity=0.329 Sum_probs=180.1
Q ss_pred CCCHHHHHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-----CCCcceEe
Q 036011 672 RTSYLDIQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-----HRNLIKIF 745 (977)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~ 745 (977)
.+++.+.....++|.+.++||+|+||+||+|+.. +++.||||++... ....+.+..|+++++.++ ||||++++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 3344444455788999999999999999999974 7899999998743 334566788999999996 99999999
Q ss_pred eeeecCCeeEEEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC------
Q 036011 746 SSCCNNDFRALVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE------ 818 (977)
Q Consensus 746 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~------ 818 (977)
+++...+..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEE
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccccc
Confidence 9999999999999999 899999998654 35899999999999999999999 789999999999999975
Q ss_pred -------------------CCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHh
Q 036011 819 -------------------DMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETF 879 (977)
Q Consensus 819 -------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 879 (977)
++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|||+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 7899999999998754322 2346899999999999999999999999999999999
Q ss_pred cCCCCCCcC
Q 036011 880 TRKKPTDDM 888 (977)
Q Consensus 880 tg~~p~~~~ 888 (977)
+|+.||...
T Consensus 254 ~g~~pf~~~ 262 (360)
T 3llt_A 254 TGSLLFRTH 262 (360)
T ss_dssp HSSCSCCCS
T ss_pred HCCCCCCCC
Confidence 999999764
No 191
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=351.28 Aligned_cols=267 Identities=20% Similarity=0.261 Sum_probs=199.0
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchh-hHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDR-AFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
++|.+.+.||+|+||+||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999999975 7899999998755422 223456799999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcc
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 840 (977)
++ |+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-- 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-- 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc--
Confidence 97 5999999887777999999999999999999999 78999999999999999999999999999986543222
Q ss_pred eeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh---CCCchhhhcchhhh
Q 036011 841 TQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES---LPHGLMEVVDTNLL 916 (977)
Q Consensus 841 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 916 (977)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ......... ....+.........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcchhh
Confidence 2233468999999998876 578999999999999999999999997643222 122211111 01111111110000
Q ss_pred c----c----ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 917 R----Q----EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 917 ~----~----~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. . .........+...+.+++.+|++.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 0 00000111234567899999999999999999999873
No 192
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-38 Score=349.22 Aligned_cols=272 Identities=24% Similarity=0.312 Sum_probs=201.1
Q ss_pred HHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch-----hhHHHHHHHHHHHHhcCCCCcceEeeeeecC
Q 036011 678 IQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD-----RAFRSFDSECEVLRNVRHRNLIKIFSSCCNN 751 (977)
Q Consensus 678 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 751 (977)
+....++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence 3445678999999999999999999975 689999999875432 1234688999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccc
Q 036011 752 DFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSK 831 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 831 (977)
+..++||||+++ +|.+++......+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 85 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 85 SNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp TCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred CceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999999976 899998877667899999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh-CC--Cch
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES-LP--HGL 907 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~--~~~ 907 (977)
.+..... ......||+.|+|||++.+. .++.++||||+||++|||++|..||......+ .+....... .+ ..+
T Consensus 161 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 237 (346)
T 1ua2_A 161 SFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQW 237 (346)
T ss_dssp TTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTS
T ss_pred eccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhh
Confidence 7654322 22335689999999998654 58999999999999999999999987643222 222222211 11 001
Q ss_pred hhhcc--hhhhccc-cCc---hHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 908 MEVVD--TNLLRQE-HTS---SAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 908 ~~~~~--~~~~~~~-~~~---~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..... ....... ... .....+...+.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000 0000000 000 0001234568999999999999999999999875
No 193
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.9e-37 Score=358.49 Aligned_cols=262 Identities=22% Similarity=0.232 Sum_probs=197.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC------C
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN------D 752 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 752 (977)
.++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999865 68999999997652 34456788999999999999999999998654 4
Q ss_pred eeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 753 FRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
..++||||+++ ++.+.+.. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 56999999976 46666643 3889999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC-CC------
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL-PH------ 905 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~------ 905 (977)
..... .....+||++|+|||++.+..|+.++||||+||++|||++|+.||.+....+ .+.......- +.
T Consensus 214 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 214 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ---CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTT
T ss_pred cCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHH
Confidence 65432 2334579999999999999999999999999999999999999997643211 1111111100 00
Q ss_pred ---c---------------hhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 906 ---G---------------LMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 906 ---~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. +.......+. .............+.+++.+|++.||++|||++|++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLF--PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGS--CCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCccccc--ccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0000000000 01111222335678999999999999999999999875
No 194
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.6e-37 Score=362.37 Aligned_cols=251 Identities=25% Similarity=0.341 Sum_probs=206.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999975 79999999997643 23345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 758 LELMPNGSLEKWLYSDNY-FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
|||++||+|.+++...+. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999999976543 4899999999999999999999 789999999999999999999999999999877543
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc--cHHHHHHhhCCCchhhhcchh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM--SLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 914 (977)
. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||........ .+...+.. .+..+.
T Consensus 340 ~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~~~~p------ 409 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VPEEYS------ 409 (576)
T ss_dssp C---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CCCCCC------
T ss_pred c---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-ccccCC------
Confidence 3 22335799999999999999999999999999999999999999976432211 11111111 010000
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRI-----YMTDAAVK 956 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~ev~~~ 956 (977)
..+...+.+++.+|++.||.+|| +++|++++
T Consensus 410 -----------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 -----------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -----------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -----------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11234578999999999999999 78888754
No 195
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=354.91 Aligned_cols=263 Identities=13% Similarity=0.130 Sum_probs=206.0
Q ss_pred hcCCCcCccccCcceEEEEEEEeCC---------CCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcce---------
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSD---------GTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIK--------- 743 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 743 (977)
.++|++.+.||+|+||+||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3679999999999999999999763 789999998754 46889999999999999988
Q ss_pred ------Eeeeeec-CCeeEEEEeccCCCCHHHHhhcC-CccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCcee
Q 036011 744 ------IFSSCCN-NDFRALVLELMPNGSLEKWLYSD-NYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNIL 815 (977)
Q Consensus 744 ------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIl 815 (977)
+++++.. .+..++||||+ +++|.+++... ...+++..+..++.||+.||+||| +.||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 5666665 67889999999 99999999875 346999999999999999999999 789999999999999
Q ss_pred eCCCC--ceEEeecccccccCCCCCcc-----eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcC
Q 036011 816 LDEDM--VAHVSDFGLSKLFDEGDDSV-----TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDM 888 (977)
Q Consensus 816 l~~~~--~~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 888 (977)
++.++ .+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 99999999998765432211 113346999999999999999999999999999999999999999765
Q ss_pred CcccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 889 FTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
............... .......+... ....++..+.+++.+||+.||++||+++++++.|+++..
T Consensus 272 ~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 272 LPNTEDIMKQKQKFV-DKPGPFVGPCG--------HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp TTCHHHHHHHHHHHH-HSCCCEECTTS--------CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHhcc-CChhhhhhhcc--------ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 433222222221110 00000000000 000123457899999999999999999999999988764
No 196
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.3e-38 Score=363.88 Aligned_cols=248 Identities=25% Similarity=0.267 Sum_probs=194.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999964 69999999997642 23345678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHS-TPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
|||+++|+|.+++.... .+++..+..++.||+.||+||| + .||+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999987654 4899999999999999999999 6 89999999999999999999999999999864332
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
. ......+||++|+|||++.+..++.++||||+||++|||++|+.||......+ .......... .
T Consensus 303 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~------------~ 367 (446)
T 4ejn_A 303 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-LFELILMEEI------------R 367 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC------------C
T ss_pred C--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-HHHHHHhCCC------------C
Confidence 2 22334579999999999999999999999999999999999999997542211 1111111000 0
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRI-----YMTDAAV 955 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~ev~~ 955 (977)
.. ..+...+.+++.+||+.||.+|| +++|+++
T Consensus 368 ~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 FP-------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC-------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 00 01234578999999999999999 9999976
No 197
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.5e-37 Score=353.11 Aligned_cols=248 Identities=22% Similarity=0.290 Sum_probs=191.9
Q ss_pred cCCCcC-ccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHh-cCCCCcceEeeeeec----CCeeE
Q 036011 683 DGFNEC-NLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRN-VRHRNLIKIFSSCCN----NDFRA 755 (977)
Q Consensus 683 ~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~----~~~~~ 755 (977)
++|.+. +.||+|+||+||+|+.. +|+.||||++... ..+.+|++++.+ .+||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 566665 68999999999999975 6899999998633 356788888754 589999999998865 56789
Q ss_pred EEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC---CCceEEeeccccc
Q 036011 756 LVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE---DMVAHVSDFGLSK 831 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~ 831 (977)
+||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998754 35899999999999999999999 789999999999999997 7899999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc--cHHHHHH-hhCCCchh
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM--SLKKWVK-ESLPHGLM 908 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~-~~~~~~~~ 908 (977)
...... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||........ .....+. ..+..
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~--- 286 (400)
T 1nxk_A 213 ETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF--- 286 (400)
T ss_dssp ECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCC---
T ss_pred ccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccC---
Confidence 764322 22345689999999999999999999999999999999999999976433221 1111111 11000
Q ss_pred hhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 909 EVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.......+...+.+++.+||+.||++|||+.|++++
T Consensus 287 ------------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 287 ------------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp ------------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ------------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000111234457899999999999999999999875
No 198
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-37 Score=362.03 Aligned_cols=195 Identities=25% Similarity=0.390 Sum_probs=155.7
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeec-----CCe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN-----NDF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~ 753 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367999999999999999999865 78999999986543 3445678999999999999999999999843 357
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.|+||||+ +|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 579999987654 4899999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCc-------------------------ceeeccccCCcccCcccc-CCCCcCcccchhhHhHHHHHHhcC
Q 036011 834 DEGDDS-------------------------VTQTMTIATIGYMAPEYG-TEGIVSSKCDVYSYGVLLTETFTR 881 (977)
Q Consensus 834 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg 881 (977)
...... ......+||++|+|||++ .+..|+.++||||+||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 532211 122345789999999975 566799999999999999999993
No 199
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.6e-38 Score=347.92 Aligned_cols=255 Identities=30% Similarity=0.466 Sum_probs=203.3
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEE--EEEEeeccc-hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSF--AIKVFNLQL-DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~v--avK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 757 (977)
++|++.+.||+|+||.||+|+.. ++..+ |||++.... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999865 56644 999887532 34456789999999999 899999999999999999999
Q ss_pred EeccCCCCHHHHhhcCC---------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCce
Q 036011 758 LELMPNGSLEKWLYSDN---------------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVA 822 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 822 (977)
|||+++|+|.+++.... ..+++..++.++.|+++||+||| +.||+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997654 35899999999999999999999 7899999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHh
Q 036011 823 HVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKE 901 (977)
Q Consensus 823 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 901 (977)
||+|||+++...... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....
T Consensus 182 kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-----~~~~ 253 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEK 253 (327)
T ss_dssp EECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHH
T ss_pred EEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-----HHHH
Confidence 999999997543211 1223357889999999988899999999999999999998 999997643211 1111
Q ss_pred hCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 902 SLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
...+ .... ....+...+.+++.+||+.+|.+|||+.|+++.|+++..
T Consensus 254 -~~~~--------~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 254 -LPQG--------YRLE-----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp -GGGT--------CCCC-----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -hhcC--------CCCC-----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1110 0000 001233457899999999999999999999999988764
No 200
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.7e-37 Score=335.19 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=197.9
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeec----CCeeE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN----NDFRA 755 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 755 (977)
..|.+.+.||+|+||+||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34777889999999999999864 68899999987543 3456778999999999999999999998865 45688
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCceeeC-CCCceEEeecccccc
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTP--VVHCDLKPSNILLD-EDMVAHVSDFGLSKL 832 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~-~~~~~kl~Dfgla~~ 832 (977)
+||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999997644 3899999999999999999999 777 99999999999998 889999999999976
Q ss_pred cCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcc
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVD 912 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (977)
..... .....||+.|+|||++.+ .++.++||||+|+++|+|++|+.||............ .......
T Consensus 182 ~~~~~----~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~----~~~~~~~---- 248 (290)
T 1t4h_A 182 KRASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR----VTSGVKP---- 248 (290)
T ss_dssp CCTTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH----HTTTCCC----
T ss_pred ccccc----cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHH----HhccCCc----
Confidence 54322 223469999999998764 5899999999999999999999999764322211111 1110000
Q ss_pred hhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 913 TNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..........+.+++.+||+.+|.+|||+.|++++
T Consensus 249 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 ---------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 00001122357899999999999999999999864
No 201
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.7e-38 Score=343.38 Aligned_cols=259 Identities=26% Similarity=0.395 Sum_probs=199.8
Q ss_pred hcCCCcCccccCcceEEEEEEEeC--CCC--EEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS--DGT--SFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFR 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 754 (977)
.++|++.+.||+|+||+||+|++. +++ .||||+++... ....+.+.+|++++++++||||+++++++.+.. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357889999999999999999853 333 68999987542 345677899999999999999999999998765 7
Q ss_pred EEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 755 ALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
++||||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999999876666999999999999999999999 7899999999999999999999999999998875
Q ss_pred CCCCcc-eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcc
Q 036011 835 EGDDSV-TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVD 912 (977)
Q Consensus 835 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (977)
...... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ...... ....
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~---~~~~----- 242 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILHKID---KEGE----- 242 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHH---TSCC-----
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--HHHHHH---ccCC-----
Confidence 543322 2223457889999999988889999999999999999999 999997642211 111110 0000
Q ss_pred hhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 913 TNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.. .....++..+.+++.+||+.+|++|||+.++++.|+++.+
T Consensus 243 -~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 243 -RL-------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp -CC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred -CC-------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 00 0011234568899999999999999999999999998885
No 202
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=9.6e-38 Score=346.80 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=199.7
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEEEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 758 (977)
..++|++.+.||+|+||+||+|+.+ +|+.||||++..... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3467999999999999999999975 689999999975532 345788888888 7999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCC----CceEEeecccccccC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDED----MVAHVSDFGLSKLFD 834 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfgla~~~~ 834 (977)
||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||++..+ +.+||+|||+++...
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999997654 4899999999999999999999 7899999999999998533 359999999998765
Q ss_pred CCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
.... .....+||+.|+|||++.+..++.++||||+||++|||++|..||...... ........... ..
T Consensus 172 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~~--------~~ 239 (342)
T 2qr7_A 172 AENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEILARIGS--------GK 239 (342)
T ss_dssp CTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHHHHHHH--------CC
T ss_pred CCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHHHHHcc--------CC
Confidence 4322 223356899999999998888999999999999999999999999753221 11111111000 00
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.... ...+..+...+.+++.+|++.||++||++.|++++
T Consensus 240 ~~~~---~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 240 FSLS---GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCCC---STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cccC---ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000 00011233457899999999999999999999764
No 203
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4e-38 Score=354.11 Aligned_cols=266 Identities=23% Similarity=0.318 Sum_probs=205.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357899999999999999999975 68999999997653 3445678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHST-PVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
|+++|+|.+++.... .+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999997654 3899999999999999999999 54 8999999999999999999999999999765322
Q ss_pred cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHH---------------------
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKK--------------------- 897 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~--------------------- 897 (977)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.....
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 122346999999999999999999999999999999999999999764322110000
Q ss_pred ---HHHh-hCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 898 ---WVKE-SLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 898 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
+... ..+....+..+........ ......+...+.+++.+||+.||++|||++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCC-CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCCcccchhhhhHHhccCCC-CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000 0000011111111111110 00011234468899999999999999999999864
No 204
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.2e-38 Score=373.49 Aligned_cols=256 Identities=27% Similarity=0.460 Sum_probs=208.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEecc
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 761 (977)
.++|++.+.||+|+||+||+|+++++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 45688889999999999999999888889999997543 234679999999999999999999999876 6789999999
Q ss_pred CCCCHHHHhhcC-CccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcc
Q 036011 762 PNGSLEKWLYSD-NYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSV 840 (977)
Q Consensus 762 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 840 (977)
++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 419 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HH
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-ee
Confidence 999999999753 235899999999999999999999 7899999999999999999999999999998764321 11
Q ss_pred eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccc
Q 036011 841 TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQE 919 (977)
Q Consensus 841 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (977)
......+++.|+|||++.++.++.++|||||||++|||++ |+.||.+....+ ....+..... .
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~----------~---- 483 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYR----------M---- 483 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHHHTTCC----------C----
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC----------C----
Confidence 1122346788999999998899999999999999999999 899987643221 1111111000 0
Q ss_pred cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 920 HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.....++..+.+++.+||+.+|++|||+.++++.|+++..
T Consensus 484 ---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 484 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 0011234568899999999999999999999999998763
No 205
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.3e-38 Score=341.53 Aligned_cols=249 Identities=23% Similarity=0.360 Sum_probs=204.6
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeec---------
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCN--------- 750 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------- 750 (977)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567899999999999999999976 79999999987543 357789999999999999999998854
Q ss_pred -------CCeeEEEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCce
Q 036011 751 -------NDFRALVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVA 822 (977)
Q Consensus 751 -------~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 822 (977)
....++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 345789999999999999997642 45899999999999999999999 7899999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh
Q 036011 823 HVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES 902 (977)
Q Consensus 823 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 902 (977)
||+|||++........ .....|++.|+|||++.+..++.++||||+|+++|||++|..|+... ..+....
T Consensus 162 kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~~~~ 231 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFFTDL 231 (284)
T ss_dssp EECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHHHHH
T ss_pred EECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHHHHh
Confidence 9999999987754322 22345999999999999999999999999999999999999886421 0111100
Q ss_pred CCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhc
Q 036011 903 LPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKII 963 (977)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~ 963 (977)
.. ..+ . ..+...+.+++.+||+.||.+|||+.|+++++..++..
T Consensus 232 ~~--------~~~-~--------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 232 RD--------GII-S--------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp HT--------TCC-C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred hc--------ccc-c--------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 00 000 0 01223467899999999999999999999999988853
No 206
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.7e-37 Score=340.23 Aligned_cols=251 Identities=24% Similarity=0.319 Sum_probs=202.3
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
.++|.+.+.||+|+||+||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 467889999999999999999975 7999999999866544556789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee---CCCCceEEeecccccccCCCC
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL---DEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~~ 837 (977)
+++++|.+++...+ .+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 99999999987654 4899999999999999999999 7899999999999999 78899999999999765432
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ ............
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~------------ 226 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKEGYYEF------------ 226 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHCCCCC------------
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCC------------
Confidence 1223469999999999999999999999999999999999999997542211 111111110000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.......++..+.+++.+|++.||++|||+.|++++
T Consensus 227 ---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 227 ---ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp ---CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ---CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000011234457899999999999999999999864
No 207
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.8e-37 Score=336.48 Aligned_cols=257 Identities=23% Similarity=0.316 Sum_probs=205.5
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch------hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD------RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRA 755 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 755 (977)
++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56889999999999999999976 699999999876531 13567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC----ceEEeeccccc
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM----VAHVSDFGLSK 831 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfgla~ 831 (977)
+||||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++ .+||+|||++.
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999997644 4899999999999999999999 78999999999999999877 89999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhc
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVV 911 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (977)
....... .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||......+ ....+.......
T Consensus 161 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~------ 230 (283)
T 3bhy_A 161 KIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTNISAVNYDF------ 230 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCCCC------
T ss_pred eccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHHhHhcccCC------
Confidence 7654322 223458999999999999999999999999999999999999997642211 111111100000
Q ss_pred chhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH--HHchhh
Q 036011 912 DTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK--LKKIKI 962 (977)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~--L~~~~~ 962 (977)
.......++..+.+++.+||+.+|++||++.|++++ +++++.
T Consensus 231 ---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 231 ---------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp ---------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred ---------cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 000111234457899999999999999999999873 455553
No 208
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=355.69 Aligned_cols=300 Identities=25% Similarity=0.218 Sum_probs=151.9
Q ss_pred ccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccC
Q 036011 148 LEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFG 227 (977)
Q Consensus 148 L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~ 227 (977)
|+.|+|++|.|++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++
T Consensus 34 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-------------------- 93 (477)
T 2id5_A 34 TRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-------------------- 93 (477)
T ss_dssp CSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC--------------------
T ss_pred CcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC--------------------
Confidence 333333333333333444444455555555555555444445555555555555555444
Q ss_pred CcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCC
Q 036011 228 NQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTT 307 (977)
Q Consensus 228 N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (977)
.+++..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++++.+..|..+++|+.|++++|.++.
T Consensus 94 -------~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 166 (477)
T 2id5_A 94 -------LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 166 (477)
T ss_dssp -------SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS
T ss_pred -------ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc
Confidence 2334444455566666666666665556666666777777777777766666666666666666666665554
Q ss_pred CCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCC
Q 036011 308 DSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNG 387 (977)
Q Consensus 308 ~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 387 (977)
+++.. +..++ +|+.|++++|.+.+
T Consensus 167 ~~~~~-------l~~l~-------------------------------------------------~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 167 IPTEA-------LSHLH-------------------------------------------------GLIVLRLRHLNINA 190 (477)
T ss_dssp CCHHH-------HTTCT-------------------------------------------------TCCEEEEESCCCCE
T ss_pred cChhH-------hcccC-------------------------------------------------CCcEEeCCCCcCcE
Confidence 33211 23333 33333333333333
Q ss_pred CCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccC
Q 036011 388 TIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWS 467 (977)
Q Consensus 388 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 467 (977)
..+..|..+++|++|++++|.+.+.+|.......+|+.|++++|++++..+..+..+++|++|+|++|++++..+..|..
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 270 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTT
T ss_pred eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccc
Confidence 33344444455555555555444444444444445555555555555433344555555555555555555444444555
Q ss_pred cccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcccc
Q 036011 468 LEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFE 530 (977)
Q Consensus 468 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 530 (977)
+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 271 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp CTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred cccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 555555555555554444444444444555555555444333334444444444444444444
No 209
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=8.6e-38 Score=346.98 Aligned_cols=268 Identities=23% Similarity=0.293 Sum_probs=201.3
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467889999999999999999975 58999999986543 233456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||+++++|.++..... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 104 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 9999999988876544 4899999999999999999999 78999999999999999999999999999987654322
Q ss_pred cceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC--CCc---------
Q 036011 839 SVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL--PHG--------- 906 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~--------- 906 (977)
......||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. ........- ...
T Consensus 180 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 --VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCG
T ss_pred --ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhcc
Confidence 22334699999999998775 789999999999999999999999976433221 111111000 000
Q ss_pred -hhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 907 -LMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 907 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
......+..............+...+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000011110000001111245568999999999999999999999764
No 210
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=346.20 Aligned_cols=256 Identities=21% Similarity=0.261 Sum_probs=190.0
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-CCCcceEeeeee--------cC
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-HRNLIKIFSSCC--------NN 751 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~~ 751 (977)
..+|++.+.||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 356889999999999999999964 78999999987766666778999999999996 999999999984 33
Q ss_pred CeeEEEEeccCCCCHHHHhhc--CCccCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCceeeCCCCceEEeec
Q 036011 752 DFRALVLELMPNGSLEKWLYS--DNYFLDLLERLNIMIGVALALEYLHHGHSTP--VVHCDLKPSNILLDEDMVAHVSDF 827 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Df 827 (977)
...++||||+. |+|.+++.. ....+++..++.++.||+.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 45789999995 799998865 3345899999999999999999999 778 999999999999999999999999
Q ss_pred ccccccCCCCCcc----------eeeccccCCcccCcccc---CCCCcCcccchhhHhHHHHHHhcCCCCCCcCCccccc
Q 036011 828 GLSKLFDEGDDSV----------TQTMTIATIGYMAPEYG---TEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMS 894 (977)
Q Consensus 828 gla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 894 (977)
|+++......... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 9998775432211 11134589999999998 56788999999999999999999999996532111
Q ss_pred HHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhc
Q 036011 895 LKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKII 963 (977)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~ 963 (977)
........ ... ..+...+.+++.+||+.+|++|||+.|++++|+.+...
T Consensus 261 ---~~~~~~~~------------~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 261 ---IVNGKYSI------------PPH-----DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp --------CCC------------CTT-----CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---hhcCcccC------------Ccc-----cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11110000 000 00112367899999999999999999999999988753
No 211
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4e-37 Score=345.69 Aligned_cols=256 Identities=26% Similarity=0.369 Sum_probs=206.0
Q ss_pred HHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--------hhhHHHHHHHHHHHHhc-CCCCcceEeee
Q 036011 678 IQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--------DRAFRSFDSECEVLRNV-RHRNLIKIFSS 747 (977)
Q Consensus 678 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 747 (977)
.....++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445677999999999999999999975 79999999987543 12245688999999999 79999999999
Q ss_pred eecCCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeec
Q 036011 748 CCNNDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDF 827 (977)
Q Consensus 748 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 827 (977)
+......++||||+++++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEec
Confidence 999999999999999999999997643 4899999999999999999999 789999999999999999999999999
Q ss_pred ccccccCCCCCcceeeccccCCcccCccccC------CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHh
Q 036011 828 GLSKLFDEGDDSVTQTMTIATIGYMAPEYGT------EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKE 901 (977)
Q Consensus 828 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 901 (977)
|++..+..... .....||+.|+|||++. ...++.++||||+||++|||++|+.||....... ........
T Consensus 245 G~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~i~~~ 320 (365)
T 2y7j_A 245 GFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL-MLRMIMEG 320 (365)
T ss_dssp TTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHT
T ss_pred CcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhC
Confidence 99987764332 23356999999999875 3468899999999999999999999996532111 11111111
Q ss_pred hCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 902 SLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.... ..+....+...+.+++.+|++.||++|||+.|++++
T Consensus 321 ~~~~---------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 321 QYQF---------------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCCC---------------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCC---------------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 001111234457899999999999999999999863
No 212
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.1e-38 Score=343.58 Aligned_cols=254 Identities=22% Similarity=0.288 Sum_probs=201.4
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
..+.|++.+.||+|+||+||+|+.. +++.||+|++........+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467999999999999999999976 589999999987666667889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++++|.+++......+++..+..++.|++.||+||| +.|++||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--L 171 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--H
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--c
Confidence 99999999998875556999999999999999999999 789999999999999999999999999997643211 1
Q ss_pred ceeeccccCCcccCcccc-----CCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 840 VTQTMTIATIGYMAPEYG-----TEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
.......||+.|+|||++ .+..++.++||||+|+++|||++|..||....... ..........+.
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~--------- 241 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDPPT--------- 241 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCC---------
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCCcc---------
Confidence 112234589999999987 46778999999999999999999999997643211 111111111110
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
......+...+.+++.+||+.+|++|||+.|++++
T Consensus 242 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 242 -------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -------CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -------cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00011223457899999999999999999999763
No 213
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1e-37 Score=349.26 Aligned_cols=265 Identities=20% Similarity=0.296 Sum_probs=206.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhh-----------------HHHHHHHHHHHHhcCCCCcceE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRA-----------------FRSFDSECEVLRNVRHRNLIKI 744 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~l 744 (977)
.++|++.+.||+|+||.||+|+. +|+.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 89999999987553221 1789999999999999999999
Q ss_pred eeeeecCCeeEEEEeccCCCCHHHH------hhcC-CccCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCceee
Q 036011 745 FSSCCNNDFRALVLELMPNGSLEKW------LYSD-NYFLDLLERLNIMIGVALALEYLHHGHS-TPVVHCDLKPSNILL 816 (977)
Q Consensus 745 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~dlk~~NIll 816 (977)
++++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.||+||| + .||+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5542 346899999999999999999999 6 899999999999999
Q ss_pred CCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCC-CcCc-ccchhhHhHHHHHHhcCCCCCCcCCccccc
Q 036011 817 DEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEG-IVSS-KCDVYSYGVLLTETFTRKKPTDDMFTGEMS 894 (977)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslG~il~elltg~~p~~~~~~~~~~ 894 (977)
+.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|||++|+.||.........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999876443 23345699999999999887 6766 999999999999999999999764332221
Q ss_pred HHHHHHhhC--CCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 895 LKKWVKESL--PHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 895 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
......... +........+ .. ..........+...+.+++.+||+.||.+|||+.|++++
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYP-LT-NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTT-TC-C--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhccCcCCccchhhhhcc-cc-ccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111111 0000000000 00 000000112234568899999999999999999999874
No 214
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.2e-38 Score=347.05 Aligned_cols=268 Identities=23% Similarity=0.285 Sum_probs=195.9
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch--hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD--RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
..++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4567999999999999999999864 789999999975542 2345678999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee-----CCCCceEEeecccccc
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL-----DEDMVAHVSDFGLSKL 832 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll-----~~~~~~kl~Dfgla~~ 832 (977)
|||++ |+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 112 ~e~~~-~~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EECCS-EEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EecCC-CCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 99997 599999987654 899999999999999999999 7899999999999999 4556699999999987
Q ss_pred cCCCCCcceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh-CCCc--hh
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES-LPHG--LM 908 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~--~~ 908 (977)
...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||......+ .+....... .+.. +.
T Consensus 187 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 187 FGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTST
T ss_pred cCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhhhh
Confidence 653322 22334689999999998774 58999999999999999999999997643222 122222111 1110 00
Q ss_pred hhcc-----hhh---hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 909 EVVD-----TNL---LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 909 ~~~~-----~~~---~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.... ... ............+...+.+++.+|++.||++|||++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 000 00000000011134567899999999999999999999763
No 215
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.6e-37 Score=336.03 Aligned_cols=249 Identities=22% Similarity=0.299 Sum_probs=205.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|.+.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467899999999999999999975 58899999987653 34456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++++|.+++.... .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999887644 4899999999999999999999 7899999999999999999999999999998765332
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ ......... ...
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~------------~~~ 234 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNE------------YSI 234 (294)
T ss_dssp C--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTC------------CCC
T ss_pred c--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhhcc------------CCC
Confidence 2 2233568999999999999999999999999999999999999997643221 111111100 000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. ..+...+.+++.+||+.||++|||++|++++
T Consensus 235 ~-------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 P-------KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c-------cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 0123357889999999999999999999875
No 216
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.3e-37 Score=333.60 Aligned_cols=247 Identities=25% Similarity=0.315 Sum_probs=203.8
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367899999999999999999975 67899999987543 22346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++|+|.+++...+ .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 99999999999997654 4899999999999999999999 8999999999999999999999999999997654322
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
.....|++.|+|||++.+..++.++||||+|+++|||++|+.||......+ ....... .....
T Consensus 169 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~------------~~~~~ 231 (284)
T 2vgo_A 169 ----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-THRRIVN------------VDLKF 231 (284)
T ss_dssp ----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHT------------TCCCC
T ss_pred ----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-HHHHHhc------------cccCC
Confidence 223468999999999999999999999999999999999999997532211 1111100 00000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. ......+.+++.+|++.+|.+||++.|++++
T Consensus 232 ~-------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 P-------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp C-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred C-------CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 0 0123457899999999999999999999863
No 217
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.3e-37 Score=334.92 Aligned_cols=251 Identities=25% Similarity=0.341 Sum_probs=198.4
Q ss_pred CCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEeccC
Q 036011 684 GFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELMP 762 (977)
Q Consensus 684 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 762 (977)
+|.....||+|+||.||+|+.. +++.||||++........+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 3455568999999999999964 689999999987666666789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCc--cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC-CCceEEeecccccccCCCCCc
Q 036011 763 NGSLEKWLYSDNY--FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE-DMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 763 ~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfgla~~~~~~~~~ 839 (977)
+++|.+++..... ..++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+|||++........
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 9999999987533 4678899999999999999999 789999999999999987 89999999999987654221
Q ss_pred ceeeccccCCcccCccccCCCC--cCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGI--VSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
......|++.|+|||++.+.. ++.++||||+|+++|||++|+.||................... +.+
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------~~~-- 247 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH--------PEI-- 247 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCC--------CCC--
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccc--------ccc--
Confidence 123346899999999987643 8899999999999999999999996532221111110000000 000
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
+..+...+.+++.+||+.||++||++.|++++
T Consensus 248 -------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 248 -------PESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp -------CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred -------cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01123457899999999999999999999764
No 218
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.4e-37 Score=336.76 Aligned_cols=250 Identities=24% Similarity=0.286 Sum_probs=188.1
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++.+.||+|+||+||+|+. .+|+.||||++.... ....+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46799999999999999999997 478999999987653 223334555666688889999999999999999999999
Q ss_pred eccCCCCHHHHhhc---CCccCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 759 ELMPNGSLEKWLYS---DNYFLDLLERLNIMIGVALALEYLHHGHST-PVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 759 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
||++ |+|.+++.. ....+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 588777654 3446999999999999999999999 66 99999999999999999999999999998765
Q ss_pred CCCCcceeeccccCCcccCcccc----CCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhh
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYG----TEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEV 910 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (977)
.... .....||+.|+|||++ .+..++.++||||+|+++|||++|+.||..................+...
T Consensus 162 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--- 235 (290)
T 3fme_A 162 DDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP--- 235 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCC---
T ss_pred cccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcc---
Confidence 4322 2234699999999995 56678999999999999999999999997543332222222221111100
Q ss_pred cchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 911 VDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
...+...+.+++.+|++.+|++|||+.|+++
T Consensus 236 --------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 --------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0112345789999999999999999999987
No 219
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.1e-37 Score=373.46 Aligned_cols=249 Identities=25% Similarity=0.401 Sum_probs=198.5
Q ss_pred ccccCcceEEEEEEEeC---CCCEEEEEEeeccch--hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEeccCC
Q 036011 689 NLLGRGSFGSVYKGTFS---DGTSFAIKVFNLQLD--RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLELMPN 763 (977)
Q Consensus 689 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 763 (977)
+.||+|+||+||+|.+. .++.||||+++.... ...+++.+|++++++++||||+++++++.+ +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999976532 345789999999999999999999999965 457899999999
Q ss_pred CCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc-cee
Q 036011 764 GSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS-VTQ 842 (977)
Q Consensus 764 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~-~~~ 842 (977)
|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+...... ...
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997654 4899999999999999999999 789999999999999999999999999999877544322 222
Q ss_pred eccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccC
Q 036011 843 TMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHT 921 (977)
Q Consensus 843 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (977)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ....+......
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~~---------------- 591 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERM---------------- 591 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCCC----------------
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC----------------
Confidence 33457889999999999999999999999999999998 999997643221 11111111000
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 922 SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 922 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
..+..++..+.+++.+||+.||++||++.++++.|+++-
T Consensus 592 -~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 592 -GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 001123456889999999999999999999999998764
No 220
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.9e-37 Score=358.76 Aligned_cols=253 Identities=22% Similarity=0.308 Sum_probs=204.8
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++.+.. ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367899999999999999999975 69999999997653 23346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCC---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 758 LELMPNGSLEKWLYSDN---YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
|||++||+|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999987643 35899999999999999999999 7899999999999999999999999999998775
Q ss_pred CCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
.... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......... ...
T Consensus 341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~--------~~~ 409 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVL--------EQA 409 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHH--------HCC
T ss_pred CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHh--------hcc
Confidence 4332 1233479999999999999999999999999999999999999997643211 1111111110 000
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCH-----HHHHH
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYM-----TDAAV 955 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~ev~~ 955 (977)
.... ..+...+.+++.+|++.||++||++ .|+++
T Consensus 410 ~~~p-------~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 410 VTYP-------DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CCCC-------TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cCCC-------cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 0000 1123457889999999999999975 56653
No 221
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.7e-37 Score=355.27 Aligned_cols=200 Identities=26% Similarity=0.392 Sum_probs=168.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC-----Ce
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN-----DF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 753 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999965 68899999997543 34456789999999999999999999998765 57
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.++||||++ |+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999986 59999997654 4899999999999999999999 789999999999999999999999999999977
Q ss_pred CCCCCc--------------------ceeeccccCCcccCcccc-CCCCcCcccchhhHhHHHHHHhcCCCCCC
Q 036011 834 DEGDDS--------------------VTQTMTIATIGYMAPEYG-TEGIVSSKCDVYSYGVLLTETFTRKKPTD 886 (977)
Q Consensus 834 ~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg~~p~~ 886 (977)
...... ......+||++|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 543221 122446799999999985 56679999999999999999998665554
No 222
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4e-37 Score=359.89 Aligned_cols=251 Identities=27% Similarity=0.348 Sum_probs=203.5
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999975 79999999987543 234567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeC---CCCceEEeecccccccCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLD---EDMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~Dfgla~~~~~ 835 (977)
||+.+|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++ .++.+||+|||+++.+..
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999887654 4899999999999999999999 78999999999999995 556899999999987654
Q ss_pred CCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 836 GDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 836 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
.. .....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+....+ .+...........
T Consensus 177 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~--------- 242 (486)
T 3mwu_A 177 NT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYAFD--------- 242 (486)
T ss_dssp C-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCSC---------
T ss_pred CC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCC---------
Confidence 32 2234569999999999876 59999999999999999999999997642211 1111111111110
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+....+...+.+++.+||+.+|.+|||+.|++++
T Consensus 243 ------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 ------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11112234457899999999999999999999875
No 223
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1e-36 Score=352.25 Aligned_cols=261 Identities=20% Similarity=0.237 Sum_probs=209.3
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCC-CCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRH-RNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.++||+|+||.||+|+. .+++.||||++..... ...+.+|+++++.++| ++|..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999996 4799999998765432 3468899999999986 566666667778889999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee---CCCCceEEeecccccccCCC
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL---DEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~ 836 (977)
|+ +++|.+++......+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 99999999876667999999999999999999999 7899999999999999 68899999999999887654
Q ss_pred CCcc-----eeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc--cHHHHHHhhCCCchhh
Q 036011 837 DDSV-----TQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM--SLKKWVKESLPHGLME 909 (977)
Q Consensus 837 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~ 909 (977)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+..+..........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~- 238 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE- 238 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH-
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH-
Confidence 3221 12245699999999999999999999999999999999999999987533221 111111111111000
Q ss_pred hcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 910 VVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.....++..+.+++.+||+.+|++||++.++++.|+++..
T Consensus 239 -------------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 239 -------------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp -------------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred -------------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 0011234568999999999999999999999999988754
No 224
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.5e-37 Score=338.89 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=206.0
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.+.|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356889999999999999999864 68999999997654 3446789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 99999999999754 4899999999999999999999 78999999999999999999999999999987654321
Q ss_pred ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQE 919 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (977)
......|++.|+|||++.+..++.++||||||+++|||++|+.||......+ .........+.. +
T Consensus 175 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~--------~---- 239 (303)
T 3a7i_A 175 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNNPPT--------L---- 239 (303)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCC--------C----
T ss_pred -ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCCCCC--------C----
Confidence 2233468999999999999999999999999999999999999987542211 111111111000 0
Q ss_pred cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 920 HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
...+...+.+++.+||+.+|++|||+.|++++
T Consensus 240 -----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 240 -----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp -----CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred -----ccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00123457899999999999999999999875
No 225
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.5e-37 Score=336.92 Aligned_cols=252 Identities=25% Similarity=0.320 Sum_probs=201.2
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
..++|++.+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4577999999999999999999975 59999999987543 34678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCc
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDS 839 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 839 (977)
|+++|+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA- 180 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-
Confidence 99999999999755556899999999999999999999 78999999999999999999999999999987654321
Q ss_pred ceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccc
Q 036011 840 VTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQE 919 (977)
Q Consensus 840 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (977)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ ........+.. .
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~--------~---- 245 (314)
T 3com_A 181 -KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA--IFMIPTNPPPT--------F---- 245 (314)
T ss_dssp -CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHSCCCC--------C----
T ss_pred -ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhcCCCcc--------c----
Confidence 22334689999999999999999999999999999999999999975422111 00011110000 0
Q ss_pred cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 920 HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.....+...+.+++.+||+.||.+|||+.+++++
T Consensus 246 ---~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 246 ---RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ---SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0011123457899999999999999999999763
No 226
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.3e-38 Score=340.59 Aligned_cols=256 Identities=22% Similarity=0.305 Sum_probs=204.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeee--cCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCC--NNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 756 (977)
.++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467999999999999999999975 78999999997543 344567899999999999999999999874 4678899
Q ss_pred EEeccCCCCHHHHhhcCC---ccCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeCCCCCCceeeCCCCceEEeecc
Q 036011 757 VLELMPNGSLEKWLYSDN---YFLDLLERLNIMIGVALALEYLHHGHSTP-----VVHCDLKPSNILLDEDMVAHVSDFG 828 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~dlk~~NIll~~~~~~kl~Dfg 828 (977)
||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999997532 34899999999999999999999 566 9999999999999999999999999
Q ss_pred cccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchh
Q 036011 829 LSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLM 908 (977)
Q Consensus 829 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (977)
+++....... ......|++.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+.......
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~~~~~-- 235 (279)
T 2w5a_A 162 LARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREGKFRR-- 235 (279)
T ss_dssp HHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCC--
T ss_pred hheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhhccccc--
Confidence 9987654321 122346899999999999989999999999999999999999999764321 1111111110000
Q ss_pred hhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 909 EVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
+ ...++..+.+++.+||+.+|++||++.|+++++....
T Consensus 236 ------~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 236 ------I---------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp ------C---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred ------C---------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 0 0112345789999999999999999999998765544
No 227
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.8e-37 Score=342.13 Aligned_cols=249 Identities=22% Similarity=0.302 Sum_probs=205.5
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467889999999999999999975 58899999987653 34456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++++|.+++.... .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999987644 4899999999999999999999 7899999999999999999999999999998765332
Q ss_pred CcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhc
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLR 917 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (977)
. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ ........... .
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~------------~ 260 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNEYS------------I 260 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCC------------C
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhcCCCC------------C
Confidence 2 2233569999999999999999999999999999999999999997543211 11111111000 0
Q ss_pred cccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 918 QEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. ..+...+.+++.+||+.||++|||+.|++++
T Consensus 261 ~-------~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 P-------KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred C-------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0122346889999999999999999999874
No 228
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.4e-37 Score=342.22 Aligned_cols=262 Identities=19% Similarity=0.297 Sum_probs=202.2
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-CCCcceEeeeeec--CCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-HRNLIKIFSSCCN--NDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv 757 (977)
.++|++.+.||+|+||+||+|+. .+++.||||++.... .+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36789999999999999999986 478999999987432 367889999999997 9999999999987 6678999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC-ceEEeecccccccCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM-VAHVSDFGLSKLFDEG 836 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfgla~~~~~~ 836 (977)
|||+++++|.+++.. +++..+..++.|++.||+||| +.||+||||||+||+++.++ .+||+|||+++.....
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999999854 789999999999999999999 78999999999999999776 8999999999877543
Q ss_pred CCcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc---------
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG--------- 906 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------- 906 (977)
.. .....|++.|+|||++.+ ..++.++||||+||++|||++|+.||.........+.......-...
T Consensus 185 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 QE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp CC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred Cc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 32 233468999999999877 67999999999999999999999999654333222222211110000
Q ss_pred ------hhhhcchhhh---ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 907 ------LMEVVDTNLL---RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 907 ------~~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..+....... ...........+...+.+++.+|++.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000000 0000011111234568999999999999999999999864
No 229
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.4e-38 Score=357.83 Aligned_cols=240 Identities=17% Similarity=0.177 Sum_probs=189.0
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeecc---chhhHHHHHHHH---HHHHhcCCCCcceEe-------ee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQ---LDRAFRSFDSEC---EVLRNVRHRNLIKIF-------SS 747 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~ 747 (977)
.++|.+.+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 46999999999743 234567789999 555556899999998 55
Q ss_pred eecCC-----------------eeEEEEeccCCCCHHHHhhcCCc------cCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 036011 748 CCNND-----------------FRALVLELMPNGSLEKWLYSDNY------FLDLLERLNIMIGVALALEYLHHGHSTPV 804 (977)
Q Consensus 748 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i 804 (977)
+.+.+ ..++||||+ +|+|.+++..... .+++..++.++.||+.||+||| +.||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 55443 278999999 6899999986432 2335888899999999999999 7899
Q ss_pred EeCCCCCCceeeCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCC-----------CcCcccchhhHhH
Q 036011 805 VHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEG-----------IVSSKCDVYSYGV 873 (977)
Q Consensus 805 vH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~ 873 (977)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986432 2334457 999999999887 8999999999999
Q ss_pred HHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q 036011 874 LLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDA 953 (977)
Q Consensus 874 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev 953 (977)
++|||++|+.||......+. ...+.. ... .++..+.+++.+||+.||++|||+.|+
T Consensus 302 il~elltg~~Pf~~~~~~~~-------------~~~~~~-----~~~------~~~~~~~~li~~~L~~dp~~Rpt~~e~ 357 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGG-------------SEWIFR-----SCK------NIPQPVRALLEGFLRYPKEDRLLPLQA 357 (377)
T ss_dssp HHHHHHHSSCCC------CC-------------SGGGGS-----SCC------CCCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred HHHHHHHCCCCCcccccccc-------------hhhhhh-----hcc------CCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence 99999999999965322110 111100 001 123457899999999999999999999
Q ss_pred HH
Q 036011 954 AV 955 (977)
Q Consensus 954 ~~ 955 (977)
++
T Consensus 358 l~ 359 (377)
T 3byv_A 358 ME 359 (377)
T ss_dssp HT
T ss_pred hh
Confidence 86
No 230
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4e-37 Score=346.29 Aligned_cols=274 Identities=22% Similarity=0.248 Sum_probs=202.5
Q ss_pred HHHHHHhhcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccch-----------hhHHHHHHHHHHHHhcCCCCcce
Q 036011 675 YLDIQRATDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLD-----------RAFRSFDSECEVLRNVRHRNLIK 743 (977)
Q Consensus 675 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~ 743 (977)
..++....++|.+.+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 4567788899999999999999999999988899999999865322 12367899999999999999999
Q ss_pred Eeeeeec-----CCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC
Q 036011 744 IFSSCCN-----NDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE 818 (977)
Q Consensus 744 l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~ 818 (977)
+++++.. ....++||||++ |+|.+++......+++..+..++.||+.||+||| +.||+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcC
Confidence 9999843 336799999997 6898888877667999999999999999999999 789999999999999999
Q ss_pred CCceEEeecccccccCCCCCcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHH
Q 036011 819 DMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKK 897 (977)
Q Consensus 819 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~ 897 (977)
++.+||+|||++....... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ ....
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~ 245 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNK 245 (362)
T ss_dssp TCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred CCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 9999999999998654322 2233468999999998876 679999999999999999999999997643221 1111
Q ss_pred HHHhhCCCch-----------hhhcchhhhccccCc--hHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 898 WVKESLPHGL-----------MEVVDTNLLRQEHTS--SAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 898 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.....-.... .+............. .....+...+.+++.+|++.||++|||+.|++++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 1111100000 000000000000000 0011224457899999999999999999999875
No 231
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5e-37 Score=359.60 Aligned_cols=251 Identities=25% Similarity=0.326 Sum_probs=199.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 356889999999999999999975 68999999987653 233567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC---CCceEEeecccccccCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE---DMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~~~~~ 835 (977)
||+++|+|.+++.... .+++..+..++.||++||+||| +.||+||||||+||+++. ++.+||+|||++..+..
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999887654 3899999999999999999999 789999999999999976 45599999999987754
Q ss_pred CCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 836 GDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 836 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
.. .....+||+.|+|||++. +.++.++||||+||++|+|++|..||......+ ............
T Consensus 192 ~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~---------- 256 (494)
T 3lij_A 192 QK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-ILRKVEKGKYTF---------- 256 (494)
T ss_dssp TB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCC----------
T ss_pred Cc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCC----------
Confidence 32 223356999999999886 569999999999999999999999997643221 111111111110
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..+....++..+.+++.+||+.+|.+|||+.|++++
T Consensus 257 -----~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 -----DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -----CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -----CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 001111234457899999999999999999999764
No 232
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.2e-37 Score=351.58 Aligned_cols=254 Identities=12% Similarity=0.078 Sum_probs=183.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhc--CCCCcceEe-------eee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNV--RHRNLIKIF-------SSC 748 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~ 748 (977)
...|.+.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345889999999999999999965 78999999998754 23455677885555544 699988755 444
Q ss_pred ecC-----------------CeeEEEEeccCCCCHHHHhhcCCccCCHHHH------HHHHHHHHHHHHHHHhcCCCCeE
Q 036011 749 CNN-----------------DFRALVLELMPNGSLEKWLYSDNYFLDLLER------LNIMIGVALALEYLHHGHSTPVV 805 (977)
Q Consensus 749 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~------~~i~~~i~~~L~~LH~~~~~~iv 805 (977)
... ...++||||++ |+|.+++...+..+++..+ ..++.||++||+||| +.||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 332 33799999998 8999999875544566666 788899999999999 78999
Q ss_pred eCCCCCCceeeCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCC--CCcCcccchhhHhHHHHHHhcCCC
Q 036011 806 HCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTE--GIVSSKCDVYSYGVLLTETFTRKK 883 (977)
Q Consensus 806 H~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~ 883 (977)
||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999987642 1213457799999999987 789999999999999999999999
Q ss_pred CCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 884 PTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 884 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
||......... .|... ........... .+....++..+.+++.+||+.||++|||+.|+++
T Consensus 292 Pf~~~~~~~~~--~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKG--SWKRP----SLRVPGTDSLA-----FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTT--CCCBC----CTTSCCCCSCC-----CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCccccc--chhhh----hhhhccccccc-----hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99775332110 00000 00000000000 0111123456889999999999999999999975
No 233
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-37 Score=345.23 Aligned_cols=263 Identities=22% Similarity=0.299 Sum_probs=195.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC------
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND------ 752 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 752 (977)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467899999999999999999974 79999999986542 334567889999999999999999999987653
Q ss_pred eeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 753 FRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
..++||||+ +++|.+++... .+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 88999999874 3899999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh--CCCchhh
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES--LPHGLME 909 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~ 909 (977)
.... ....++|++|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ .+....... .+.....
T Consensus 178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHH
T ss_pred cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 6432 223468999999998876 689999999999999999999999997643211 111111110 0000000
Q ss_pred hcc--------hhhhccc--cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 910 VVD--------TNLLRQE--HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 910 ~~~--------~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+. ..+.... ............+.+++.+|++.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 0000000 0000001224457899999999999999999999885
No 234
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.8e-37 Score=330.12 Aligned_cols=248 Identities=26% Similarity=0.377 Sum_probs=196.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467999999999999999999976 79999999987543 23356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999997654 3899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhh
Q 036011 838 DSVTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLL 916 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (977)
. .....|++.|+|||++.+..+ +.++||||+|+++|+|++|+.||......+ ..+.......
T Consensus 166 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~------------ 228 (276)
T 2h6d_A 166 F---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--LFKKIRGGVF------------ 228 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCC------------
T ss_pred c---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHhhcCcc------------
Confidence 1 223468999999999988765 689999999999999999999997532211 1111111000
Q ss_pred ccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 917 RQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..+ ..+...+.+++.+|++.||++|||+.|++++
T Consensus 229 ~~~------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 YIP------EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cCc------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000 0123357889999999999999999999885
No 235
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1e-36 Score=357.89 Aligned_cols=252 Identities=25% Similarity=0.309 Sum_probs=201.8
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch-------------hhHHHHHHHHHHHHhcCCCCcceEee
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD-------------RAFRSFDSECEVLRNVRHRNLIKIFS 746 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~~ 746 (977)
..++|.+.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999975 689999999875431 23467889999999999999999999
Q ss_pred eeecCCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC---ceE
Q 036011 747 SCCNNDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM---VAH 823 (977)
Q Consensus 747 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~---~~k 823 (977)
++.+....++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999887654 4899999999999999999999 78999999999999999776 699
Q ss_pred EeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC
Q 036011 824 VSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL 903 (977)
Q Consensus 824 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 903 (977)
|+|||++..+.... ......||+.|+|||++. +.++.++||||+||++|+|++|..||.+....+ ..........
T Consensus 190 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~ 264 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD-IIKKVEKGKY 264 (504)
T ss_dssp ECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC
T ss_pred EEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCC
Confidence 99999998775432 223356999999999987 469999999999999999999999997643221 1111111111
Q ss_pred CCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 904 PHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.. .......++..+.+++.+|++.||.+|||+.|++++
T Consensus 265 ~~---------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 YF---------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CC---------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC---------------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 011112234567899999999999999999999764
No 236
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.7e-37 Score=340.21 Aligned_cols=264 Identities=24% Similarity=0.320 Sum_probs=187.5
Q ss_pred HhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
...++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 44678999999999999999999864 68999999987543 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhc-------CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccc
Q 036011 758 LELMPNGSLEKWLYS-------DNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLS 830 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~-------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 830 (977)
|||+++++|.+++.. ....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999874 2345899999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCc---ceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc
Q 036011 831 KLFDEGDDS---VTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG 906 (977)
Q Consensus 831 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (977)
......... .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||........ .........+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~ 247 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSL 247 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHHHHTSSCCCT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHHHhccCCCcc
Confidence 876543211 11223469999999998865 5689999999999999999999999976433221 111111111100
Q ss_pred hhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 907 LMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.....+.... ..+...+.+++.+||+.||.+||++.|++++
T Consensus 248 ~~~~~~~~~~---------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKEML---------KKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----CCC---------CCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccchhh---------hhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0000011000 0123457899999999999999999999864
No 237
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-36 Score=341.19 Aligned_cols=270 Identities=22% Similarity=0.294 Sum_probs=203.5
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccch--hhHHHHHHHHHHHHhcCCCCcceEeeeeec--------
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLD--RAFRSFDSECEVLRNVRHRNLIKIFSSCCN-------- 750 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 750 (977)
.++|++.+.||+|+||+||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46799999999999999999997 4799999999865532 234567899999999999999999999876
Q ss_pred CCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccc
Q 036011 751 NDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLS 830 (977)
Q Consensus 751 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 830 (977)
.+..++||||+++ +|.+.+......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999975 888887776666999999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCc--ceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHH--hhCCC
Q 036011 831 KLFDEGDDS--VTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVK--ESLPH 905 (977)
Q Consensus 831 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~--~~~~~ 905 (977)
+.+...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ....... ...+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITP 250 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCh
Confidence 876533221 22334568999999998876 568999999999999999999999997643221 1111111 11111
Q ss_pred c-hhhhcchhhh------ccccCchH----HHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 906 G-LMEVVDTNLL------RQEHTSSA----EMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 906 ~-~~~~~~~~~~------~~~~~~~~----~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. +......... ........ .......+.+++.+|++.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 1 1111000000 00000000 00113457899999999999999999999875
No 238
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.9e-37 Score=339.56 Aligned_cols=252 Identities=25% Similarity=0.305 Sum_probs=198.0
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--------hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--------DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN 751 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 751 (977)
..++|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467999999999999999999975 68999999986542 12234588999999999999999999998766
Q ss_pred CeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc---eEEeecc
Q 036011 752 DFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV---AHVSDFG 828 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfg 828 (977)
+ .++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 799999999999999987654 4899999999999999999999 789999999999999987664 9999999
Q ss_pred cccccCCCCCcceeeccccCCcccCcccc---CCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCC
Q 036011 829 LSKLFDEGDDSVTQTMTIATIGYMAPEYG---TEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPH 905 (977)
Q Consensus 829 la~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (977)
++....... ......||+.|+|||++ ....++.++||||+||++|||++|..||....... .+..........
T Consensus 163 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 238 (322)
T 2ycf_A 163 HSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYN 238 (322)
T ss_dssp TCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHTCCC
T ss_pred cceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhCccc
Confidence 998764321 12234699999999986 35678999999999999999999999997643322 222222111100
Q ss_pred chhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 906 GLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
.. ......+...+.+++.+||+.||++||++.|+++
T Consensus 239 ~~--------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 FI--------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CC--------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cC--------------chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00 0011123456789999999999999999999975
No 239
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.7e-37 Score=342.10 Aligned_cols=258 Identities=18% Similarity=0.229 Sum_probs=203.8
Q ss_pred HHHHhhcCCCcC-ccccCcceEEEEEEEeC-CCCEEEEEEeeccch--hhHHHHHHHHHHHHhc-CCCCcceEeeeeecC
Q 036011 677 DIQRATDGFNEC-NLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD--RAFRSFDSECEVLRNV-RHRNLIKIFSSCCNN 751 (977)
Q Consensus 677 ~~~~~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 751 (977)
......+.|.+. +.||+|+||+||+|+.. +++.||||++..... .....+.+|+.+++.+ +||||+++++++.+.
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 344556677777 88999999999999975 699999999876542 3356789999999999 569999999999999
Q ss_pred CeeEEEEeccCCCCHHHHhhcC-CccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC---CCceEEeec
Q 036011 752 DFRALVLELMPNGSLEKWLYSD-NYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE---DMVAHVSDF 827 (977)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Df 827 (977)
+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+||
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999999998654 346899999999999999999999 789999999999999997 789999999
Q ss_pred ccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCch
Q 036011 828 GLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGL 907 (977)
Q Consensus 828 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (977)
|+++....... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||......+. ...........
T Consensus 179 g~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~-- 252 (327)
T 3lm5_A 179 GMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YLNISQVNVDY-- 252 (327)
T ss_dssp GGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCC--
T ss_pred ccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHHHHhccccc--
Confidence 99987754322 2334699999999999999999999999999999999999999976432211 11111100000
Q ss_pred hhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 908 MEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.......+...+.+++.+||+.||++|||++|++++
T Consensus 253 -------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 253 -------------SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp -------------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -------------CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 000011233457899999999999999999999765
No 240
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.6e-37 Score=336.65 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=197.0
Q ss_pred hhcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcC--CCCcceEeeeeecCCeeEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVR--HRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~l 756 (977)
..++|++.+.||+|+||.||+|+..+++.||||++.... ....+.+.+|++++++++ ||||+++++++.+.+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 456799999999999999999998889999999987543 345677899999999997 5999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||| +.+++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||++++ +.+||+|||++......
T Consensus 106 v~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred EEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 999 56889999998765 4899999999999999999999 789999999999999964 89999999999877554
Q ss_pred CCcceeeccccCCcccCccccCC-----------CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCC
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTE-----------GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPH 905 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (977)
..........||+.|+|||++.+ ..++.++||||+|+++|||++|+.||..............
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~------ 253 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII------ 253 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH------
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH------
Confidence 33333334569999999999865 5788999999999999999999999975432221111111
Q ss_pred chhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 906 GLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
+......... .....+.+++.+||+.||++||++.|++++
T Consensus 254 ------~~~~~~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 254 ------DPNHEIEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ------CTTSCCCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------hcccccCCcc-----cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1110000000 012357889999999999999999999875
No 241
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.9e-37 Score=334.75 Aligned_cols=245 Identities=21% Similarity=0.281 Sum_probs=198.6
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 756 (977)
..++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567999999999999999999975 79999999987643 33456788999999999 99999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCC---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCC--------------
Q 036011 757 VLELMPNGSLEKWLYSDN---YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDED-------------- 819 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~-------------- 819 (977)
||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997642 35899999999999999999999 7899999999999999844
Q ss_pred -----CceEEeecccccccCCCCCcceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCCCcCCcccc
Q 036011 820 -----MVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM 893 (977)
Q Consensus 820 -----~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 893 (977)
..+||+|||.+....... ...||+.|+|||++.+. .++.++||||+|+++|||++|.+|+... .
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~ 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----D 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----H
T ss_pred ccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----h
Confidence 479999999998765432 23489999999998766 6778999999999999999998876432 1
Q ss_pred cHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 894 SLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..........+. .+ ..+...+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~------------~~------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 QWHEIRQGRLPR------------IP------QVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHHHTTCCCC------------CS------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHHHcCCCCC------------CC------cccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111111111100 00 0123457899999999999999999999764
No 242
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-37 Score=347.14 Aligned_cols=255 Identities=24% Similarity=0.285 Sum_probs=202.3
Q ss_pred hcCCCcCccccCcceEEEEEEEe----CCCCEEEEEEeeccc----hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCC
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF----SDGTSFAIKVFNLQL----DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNND 752 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 752 (977)
.++|++.+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999987 368999999987542 23345678899999999 6999999999999999
Q ss_pred eeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 753 FRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
..++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999997654 4899999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCCcccCccccCC--CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhh
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTE--GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEV 910 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (977)
+..... ......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+......
T Consensus 209 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~------ 280 (355)
T 1vzo_A 209 FVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILK------ 280 (355)
T ss_dssp CCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHH------
T ss_pred cccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhc------
Confidence 643222 12233569999999999885 457899999999999999999999997533221 11221111100
Q ss_pred cchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHHH
Q 036011 911 VDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRI-----YMTDAAVKL 957 (977)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~ev~~~L 957 (977)
..... +..+...+.+++.+||+.||.+|| +++|++++.
T Consensus 281 ------~~~~~---~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 281 ------SEPPY---PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ------CCCCC---CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ------cCCCC---CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 00000 011234578899999999999999 999998754
No 243
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3e-37 Score=361.15 Aligned_cols=251 Identities=28% Similarity=0.368 Sum_probs=205.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
.++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356889999999999999999975 79999999987543 33457789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee---CCCCceEEeecccccccC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL---DEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~ 834 (977)
|||+.+|+|.+++..... +++..+..++.||+.||+||| +.||+||||||+||++ +.++.+||+|||+++.+.
T Consensus 105 ~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTCSC-CBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 999999999999876554 899999999999999999999 7899999999999999 567899999999998775
Q ss_pred CCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
.... ....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+ .............
T Consensus 181 ~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~-------- 247 (484)
T 3nyv_A 181 ASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-ILKKVEKGKYTFE-------- 247 (484)
T ss_dssp CCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCC--------
T ss_pred cccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCC--------
Confidence 4332 233569999999999866 69999999999999999999999997642211 1111111111100
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+....+...+.+++.+|++.+|.+|||+.|++++
T Consensus 248 -------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 -------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp -------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 11112234567899999999999999999999864
No 244
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=7.3e-37 Score=340.99 Aligned_cols=251 Identities=25% Similarity=0.334 Sum_probs=198.3
Q ss_pred hhcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccc-hhhHHHHHHHHHH-HHhcCCCCcceEeeeeecCCeeEEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQL-DRAFRSFDSECEV-LRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
..++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 346788999999999999999996 479999999987553 2333445555555 7788999999999999999999999
Q ss_pred EeccCCCCHHHHhhc---CCccCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 758 LELMPNGSLEKWLYS---DNYFLDLLERLNIMIGVALALEYLHHGHST-PVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
|||+++ +|.+++.. ....+++..+..++.||+.||+||| +. ||+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99888864 4456999999999999999999999 55 9999999999999999999999999999876
Q ss_pred CCCCCcceeeccccCCcccCccccC----CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhh
Q 036011 834 DEGDDSVTQTMTIATIGYMAPEYGT----EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLME 909 (977)
Q Consensus 834 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (977)
... .......||+.|+|||++. ...++.++|||||||++|||++|+.||.........+........+.
T Consensus 205 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---- 277 (340)
T 3an0_A 205 VDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ---- 277 (340)
T ss_dssp SCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC----
T ss_pred ccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCC----
Confidence 432 1222346999999999964 44789999999999999999999999975432222222211111100
Q ss_pred hcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 910 VVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
. ....+...+.+++.+||+.||++||++.|+++
T Consensus 278 -----~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 278 -----L--------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp -----C--------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----C--------CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 00123446789999999999999999999987
No 245
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.2e-36 Score=332.53 Aligned_cols=253 Identities=26% Similarity=0.332 Sum_probs=204.4
Q ss_pred HhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---------hhhHHHHHHHHHHHHhcC-CCCcceEeeee
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---------DRAFRSFDSECEVLRNVR-HRNLIKIFSSC 748 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~ 748 (977)
...++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++ ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999975 68999999987542 233466889999999996 99999999999
Q ss_pred ecCCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecc
Q 036011 749 CNNDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFG 828 (977)
Q Consensus 749 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 828 (977)
.+.+..++||||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999997653 4899999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCCCcceeeccccCCcccCccccC------CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh
Q 036011 829 LSKLFDEGDDSVTQTMTIATIGYMAPEYGT------EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES 902 (977)
Q Consensus 829 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 902 (977)
++........ .....|++.|+|||++. ...++.++||||+|+++|||++|+.||......+ .........
T Consensus 170 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~ 245 (298)
T 1phk_A 170 FSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-MLRMIMSGN 245 (298)
T ss_dssp TCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTC
T ss_pred chhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH-HHHHHhcCC
Confidence 9987654332 23346899999999874 5578999999999999999999999996532211 111111111
Q ss_pred CCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 903 LPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
... ..+....++..+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 246 YQF---------------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCC---------------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccc---------------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 100 00111123456889999999999999999999976
No 246
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.3e-37 Score=346.47 Aligned_cols=266 Identities=21% Similarity=0.263 Sum_probs=195.9
Q ss_pred HHhhcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeec-------
Q 036011 679 QRATDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCN------- 750 (977)
Q Consensus 679 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 750 (977)
....++|++.+.||+|+||+||+|+. .+|+.||||++..+. ....+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999986 479999999986542 223479999999999999999999843
Q ss_pred -------------------------------CCeeEEEEeccCCCCHHHHhhc---CCccCCHHHHHHHHHHHHHHHHHH
Q 036011 751 -------------------------------NDFRALVLELMPNGSLEKWLYS---DNYFLDLLERLNIMIGVALALEYL 796 (977)
Q Consensus 751 -------------------------------~~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~L 796 (977)
....++||||++ |+|.+.+.. ....+++..+..++.||++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334789999998 587777653 344689999999999999999999
Q ss_pred HhcCCCCeEeCCCCCCceeeC-CCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCC-CcCcccchhhHhHH
Q 036011 797 HHGHSTPVVHCDLKPSNILLD-EDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVL 874 (977)
Q Consensus 797 H~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~i 874 (977)
| +.||+||||||+||+++ .++.+||+|||+++....... .....+|+.|+|||++.+. .++.++||||+||+
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9 89999999999999998 689999999999987754332 2234689999999988765 59999999999999
Q ss_pred HHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhh--cch--------hhhccccCchHHHHHHHHHHHHHHHhhcCCC
Q 036011 875 LTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEV--VDT--------NLLRQEHTSSAEMDCLLSVLHLALDCCMESP 944 (977)
Q Consensus 875 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P 944 (977)
+|||++|+.||.+.... ..+...+...-......+ .++ ..............++..+.+++.+||+.+|
T Consensus 232 l~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 232 FGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 99999999999764322 222222211110000000 000 0000000000001134457899999999999
Q ss_pred CCCCCHHHHHHH
Q 036011 945 DQRIYMTDAAVK 956 (977)
Q Consensus 945 ~~RPs~~ev~~~ 956 (977)
++|||+.|++++
T Consensus 311 ~~R~t~~e~l~h 322 (383)
T 3eb0_A 311 DLRINPYEAMAH 322 (383)
T ss_dssp GGSCCHHHHHTS
T ss_pred hhCCCHHHHhcC
Confidence 999999999753
No 247
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9.6e-37 Score=333.55 Aligned_cols=267 Identities=22% Similarity=0.320 Sum_probs=202.1
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch--hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD--RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999975 799999999875532 234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 760 LMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
|++ |+|.+++.... ..+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 69999987653 35899999999999999999999 78999999999999999999999999999987653321
Q ss_pred cceeeccccCCcccCccccCCCC-cCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh-CCCc-----hhhh-
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGI-VSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES-LPHG-----LMEV- 910 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~-----~~~~- 910 (977)
......+|+.|+|||++.+.. ++.++||||+|+++|||++|+.||......+ ......... .+.. ....
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 159 --TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp --CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred --ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcCc
Confidence 222345899999999987765 7999999999999999999999997643222 122222211 1100 0000
Q ss_pred -cchhhhccccC--chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 911 -VDTNLLRQEHT--SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 911 -~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..+.+...... ......+...+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 00001134567899999999999999999999873
No 248
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.2e-36 Score=340.86 Aligned_cols=261 Identities=20% Similarity=0.207 Sum_probs=194.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC------
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND------ 752 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 752 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367999999999999999999865 68999999987542 344567889999999999999999999987654
Q ss_pred eeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 753 FRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
..++||||+++ +|.+++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 77999999974 78888753 3889999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc------
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG------ 906 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 906 (977)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ .+..... .....
T Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~-~~~~~~~~~~~ 251 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIE-QLGTPCPEFMK 251 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC--CCCCCHHHHT
T ss_pred ccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-HhCCCCHHHHH
Confidence 64322 2233569999999999999999999999999999999999999997642211 1111110 00000
Q ss_pred --------------------hhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 907 --------------------LMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 907 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
+........ .+............+.+++.+|++.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVL--FPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGG--SCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhccccc--CcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000 011112223446678999999999999999999999875
No 249
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.5e-36 Score=366.32 Aligned_cols=249 Identities=22% Similarity=0.255 Sum_probs=203.7
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRA 755 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 755 (977)
..++|++.+.||+|+||.||+|+.. +++.||||++.+.. ....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999975 68899999998652 33456678899999988 7999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCC
Q 036011 756 LVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 835 (977)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998754 3899999999999999999999 78999999999999999999999999999986433
Q ss_pred CCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 836 GDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 836 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+....+ ...... ....
T Consensus 495 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~-~~~~i~------------~~~~ 559 (674)
T 3pfq_A 495 DGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIM------------EHNV 559 (674)
T ss_dssp TTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH------------SSCC
T ss_pred CCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH-HHHHHH------------hCCC
Confidence 222 2334579999999999999999999999999999999999999997642211 111111 1111
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCH-----HHHHH
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYM-----TDAAV 955 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~ev~~ 955 (977)
... ......+.+++.+|++.||++||++ +|+++
T Consensus 560 ~~p-------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 AYP-------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CCC-------TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CCC-------ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 000 1123457899999999999999997 55543
No 250
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=330.36 Aligned_cols=252 Identities=22% Similarity=0.251 Sum_probs=199.1
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc----hhhHHHHHHHHHHHHhcCCCCcceEeeeee--cCCe
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL----DRAFRSFDSECEVLRNVRHRNLIKIFSSCC--NNDF 753 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 753 (977)
..++|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3478999999999999999999974 68999999997653 234567899999999999999999999984 4567
Q ss_pred eEEEEeccCCCCHHHHhhcC-CccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 754 RALVLELMPNGSLEKWLYSD-NYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
.++||||++++ +.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 77766653 346899999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCCcccCccccCCCC--cCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhh
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTEGI--VSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEV 910 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (977)
..............||+.|+|||+..+.. ++.++||||+|+++|||++|+.||......+ .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~i~~~~-------- 229 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK-LFENIGKGS-------- 229 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHCC--------
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH-HHHHHhcCC--------
Confidence 76443333444456999999999987643 4789999999999999999999997532111 011100000
Q ss_pred cchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 911 VDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.. .. .++...+.+++.+||+.||.+|||+.|++++
T Consensus 230 ----~~-~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 ----YA-IP------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CC-CC------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CC-CC------CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 00 0123457899999999999999999999975
No 251
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.3e-36 Score=348.78 Aligned_cols=197 Identities=24% Similarity=0.313 Sum_probs=172.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhc------CCCCcceEeeeeecCCee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNV------RHRNLIKIFSSCCNNDFR 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~ 754 (977)
..+|++.+.||+|+||+||+|+.. +++.||||++... ......+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999865 5899999999754 33446677888888877 477999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc--eEEeeccccc
Q 036011 755 ALVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV--AHVSDFGLSK 831 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~Dfgla~ 831 (977)
++||||+. ++|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 69999887654 35899999999999999999999 789999999999999999887 9999999997
Q ss_pred ccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcC
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDM 888 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 888 (977)
...... ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 251 ~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQRV-----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCCC-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCcc-----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 654322 2346899999999999999999999999999999999999999764
No 252
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=9.5e-37 Score=334.20 Aligned_cols=254 Identities=24% Similarity=0.320 Sum_probs=193.9
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeec---------
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCN--------- 750 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------- 750 (977)
..++|++.+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567999999999999999999964 7999999999654 3445778999999999999999999998865
Q ss_pred ----CCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEee
Q 036011 751 ----NDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSD 826 (977)
Q Consensus 751 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 826 (977)
.+..++||||+++|+|.+++......+++..++.++.|+++||+||| +.||+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEee
Confidence 35678999999999999999877667889999999999999999999 78999999999999999999999999
Q ss_pred cccccccCCCCC------------cceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCCCcCCcccc
Q 036011 827 FGLSKLFDEGDD------------SVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM 893 (977)
Q Consensus 827 fgla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 893 (977)
||++........ ........||+.|+|||++.+. .++.++||||+|+++|||++ ||........
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 999987653211 1122334689999999998764 78999999999999999998 5432111111
Q ss_pred cHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 894 SLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
........ ...+. +. .....+..+.+++.+||+.||.+|||+.|++++
T Consensus 237 -~~~~~~~~-~~~~~----~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 237 -ILKKLRSV-SIEFP----PD---------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp -HHHHHHST-TCCCC----TT---------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -HHHhcccc-ccccC----cc---------ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11111100 00000 00 001223457899999999999999999999874
No 253
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9e-37 Score=348.24 Aligned_cols=265 Identities=20% Similarity=0.242 Sum_probs=200.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcC--------CCCcceEeeeee---
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR--------HRNLIKIFSSCC--- 749 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~--- 749 (977)
.++|++.+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999864 6899999999754 344567889999999985 788999999987
Q ss_pred -cCCeeEEEEeccCCCCHHHHhhcC-CccCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCceeeCCCC------
Q 036011 750 -NNDFRALVLELMPNGSLEKWLYSD-NYFLDLLERLNIMIGVALALEYLHHGHST-PVVHCDLKPSNILLDEDM------ 820 (977)
Q Consensus 750 -~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~NIll~~~~------ 820 (977)
+....++||||+ ++++.+++... ...+++..+..++.||++||+||| ++ ||+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 556789999999 55666555443 346899999999999999999999 66 999999999999999775
Q ss_pred -------------------------------------------ceEEeecccccccCCCCCcceeeccccCCcccCcccc
Q 036011 821 -------------------------------------------VAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYG 857 (977)
Q Consensus 821 -------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 857 (977)
.+||+|||+++..... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 7999999999876532 2234689999999999
Q ss_pred CCCCcCcccchhhHhHHHHHHhcCCCCCCcCCccccc-----HHHHHHh--hCCCch-------hhhcchh--hh--ccc
Q 036011 858 TEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMS-----LKKWVKE--SLPHGL-------MEVVDTN--LL--RQE 919 (977)
Q Consensus 858 ~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~-----~~~~~~~--~~~~~~-------~~~~~~~--~~--~~~ 919 (977)
.+..++.++||||+||++|||++|+.||......+.. +...... ..+... ....... .. ...
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 9999999999999999999999999999764433211 1111100 000000 0000000 00 000
Q ss_pred ----------cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 920 ----------HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 920 ----------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
............+.+++.+||+.||++|||++|++++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0001123456678999999999999999999999864
No 254
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=343.18 Aligned_cols=258 Identities=21% Similarity=0.332 Sum_probs=200.2
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEEe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 759 (977)
.++|++.+.||+|+||+||+|+..+ .||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4778999999999999999998753 49999987543 2334567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC-
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD- 838 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~- 838 (977)
|+++++|.+++...+..+++..+..++.|+++||+||| +.||+||||||+||+++ ++.+||+|||+++.......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999887667999999999999999999999 78999999999999998 68999999999876542211
Q ss_pred --cceeeccccCCcccCccccCC---------CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCch
Q 036011 839 --SVTQTMTIATIGYMAPEYGTE---------GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGL 907 (977)
Q Consensus 839 --~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (977)
........|++.|+|||++.+ ..++.++||||||+++|||++|+.||......+. .........
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~--- 260 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI--IWQMGTGMK--- 260 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH--HHHHHTTCC---
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhccCCC---
Confidence 112223458999999998764 4578999999999999999999999975432211 111111000
Q ss_pred hhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhhc
Q 036011 908 MEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKII 963 (977)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~~ 963 (977)
+.... ..++..+.+++.+||+.+|++|||+.++++.|+++...
T Consensus 261 -----~~~~~--------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 261 -----PNLSQ--------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp -----CCCCC--------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred -----CCCCc--------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 00000 01123478999999999999999999999999998853
No 255
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=339.36 Aligned_cols=256 Identities=25% Similarity=0.324 Sum_probs=198.2
Q ss_pred HHHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhc-CCCCcceEeeeeec----
Q 036011 677 DIQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNV-RHRNLIKIFSSCCN---- 750 (977)
Q Consensus 677 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~---- 750 (977)
++....++|++.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 34445788999999999999999999974 78999999987543 3346788999999999 79999999999976
Q ss_pred --CCeeEEEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeec
Q 036011 751 --NDFRALVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDF 827 (977)
Q Consensus 751 --~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 827 (977)
.+..++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Df 173 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDF 173 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeC
Confidence 467899999999999999998653 46899999999999999999999 789999999999999999999999999
Q ss_pred ccccccCCCCCcceeeccccCCcccCccccC-----CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh
Q 036011 828 GLSKLFDEGDDSVTQTMTIATIGYMAPEYGT-----EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES 902 (977)
Q Consensus 828 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 902 (977)
|++........ ......||+.|+|||++. +..++.++||||+||++|||++|+.||.+...... ........
T Consensus 174 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~ 250 (326)
T 2x7f_A 174 GVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPRNP 250 (326)
T ss_dssp TTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSC
T ss_pred cCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHhhcCc
Confidence 99987653221 122346899999999986 56789999999999999999999999965432111 11111100
Q ss_pred CCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 903 LPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+ ... ...+...+.+++.+||+.||.+||++.|++++
T Consensus 251 ~~---------~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 251 AP---------RLK--------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp CC---------CCS--------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cc---------cCC--------ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000 00123457899999999999999999999873
No 256
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.6e-37 Score=343.04 Aligned_cols=263 Identities=22% Similarity=0.276 Sum_probs=184.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC------C
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN------D 752 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 752 (977)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 467999999999999999999864 68999999986542 34456788999999999999999999998654 5
Q ss_pred eeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 753 FRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
..++||||+ +++|.+++... .+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 78999998763 4899999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC-CC-c-hh
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL-PH-G-LM 908 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~-~-~~ 908 (977)
.... .....||++|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..+.......- +. . +.
T Consensus 182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHT
T ss_pred cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 5432 233469999999999876 68999999999999999999999999764321 11222111110 00 0 00
Q ss_pred hhcc-------hhhhccccCc--hHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 909 EVVD-------TNLLRQEHTS--SAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 909 ~~~~-------~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+.. ..+....... .........+.+++.+|++.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 0000000000 0001123457899999999999999999999875
No 257
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.6e-37 Score=368.16 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=205.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC----CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS----DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRAL 756 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 756 (977)
.++|++.+.||+|+||+||+|++. .+..||||++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 467888999999999999999864 25679999987543 344577999999999999999999999985 456899
Q ss_pred EEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCC
Q 036011 757 VLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEG 836 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 836 (977)
||||+++|+|.+++......+++..+..++.|+++||+||| +.||+||||||+|||++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999877667999999999999999999999 789999999999999999999999999999877543
Q ss_pred CCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhhcchhh
Q 036011 837 DDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNL 915 (977)
Q Consensus 837 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (977)
.. .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....+ ....+.......
T Consensus 545 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~i~~~~~~~--------- 612 (656)
T 2j0j_A 545 TY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGERLP--------- 612 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHHTCCCC---------
T ss_pred cc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCCCCC---------
Confidence 22 22233457889999999988899999999999999999997 999987643221 111111110000
Q ss_pred hccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchh
Q 036011 916 LRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIK 961 (977)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~ 961 (977)
.+..++..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 613 --------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 613 --------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 01123456789999999999999999999999998875
No 258
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.1e-36 Score=340.30 Aligned_cols=269 Identities=23% Similarity=0.261 Sum_probs=203.0
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC-----Ce
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN-----DF 753 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 753 (977)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3568999999999999999999865 68899999987543 34457789999999999999999999998654 46
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.++||||++ |+|.+++.... +++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 899999997 59999987654 899999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCcc-eeeccccCCcccCccccC-CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc---hh
Q 036011 834 DEGDDSV-TQTMTIATIGYMAPEYGT-EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG---LM 908 (977)
Q Consensus 834 ~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~ 908 (977)
....... ......||+.|+|||++. +..++.++||||+||++|||++|+.||......+ .+.......-... +.
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLN 257 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHH
Confidence 5432211 123347999999999765 4558999999999999999999999997643322 1222111100000 00
Q ss_pred hhcch-------hhhccccC--chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 909 EVVDT-------NLLRQEHT--SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 909 ~~~~~-------~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
...+. ........ ......+...+.+++.+|++.||++|||+.|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 00000000 00001224467899999999999999999999875
No 259
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.5e-36 Score=339.65 Aligned_cols=274 Identities=20% Similarity=0.224 Sum_probs=192.1
Q ss_pred HHHHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCe-
Q 036011 676 LDIQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDF- 753 (977)
Q Consensus 676 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~- 753 (977)
.+.....++|++.+.||+|+||+||+|+.. +|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345667789999999999999999999975 68999999986542 333456788888999999999999999865333
Q ss_pred ------eEEEEeccCCCCHHHHhh---cCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC-CCceE
Q 036011 754 ------RALVLELMPNGSLEKWLY---SDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE-DMVAH 823 (977)
Q Consensus 754 ------~~lv~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~-~~~~k 823 (977)
.++||||+++ +|.+.+. .....+++..+..++.|++.||+||| .|+.||+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEE
Confidence 7899999986 5544433 23345899999999999999999999 34689999999999999996 89999
Q ss_pred EeecccccccCCCCCcceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh
Q 036011 824 VSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES 902 (977)
Q Consensus 824 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 902 (977)
|+|||+++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+..+....
T Consensus 173 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~ 248 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVL 248 (360)
T ss_dssp ECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred EeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHc
Confidence 999999987754332 2234689999999988654 4899999999999999999999999764322 2222222211
Q ss_pred CCC--chhhhcchh-----hhccccC------chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 903 LPH--GLMEVVDTN-----LLRQEHT------SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 903 ~~~--~~~~~~~~~-----~~~~~~~------~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
-.. ......++. ....... ......+...+.+++.+||+.||.+|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 100 000000000 0000000 00001134568999999999999999999999875
No 260
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=8.9e-36 Score=338.80 Aligned_cols=348 Identities=16% Similarity=0.116 Sum_probs=212.8
Q ss_pred CCCCCCCCCCc-ccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcC
Q 036011 29 NNWSISQPICK-WVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDY 107 (977)
Q Consensus 29 ~~w~~~~~~c~-w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 107 (977)
++|..+.+||. |.+..|.....++ +...... .....-..++++++|++++|.++...+..|..+++|++|+|++
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i---~~~~~~~--~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~ 78 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHI---DMQTQDV--YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLND 78 (390)
T ss_dssp ---CCEECBCC------EEEESCEE---CSSCCCC--EESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTT
T ss_pred CCCCCccceehhhhhhccceeeeee---ecccccc--cccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCC
Confidence 57988877774 5555554322111 2222222 2222233578899999999999885555578899999999999
Q ss_pred ccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCC
Q 036011 108 NEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIP 187 (977)
Q Consensus 108 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p 187 (977)
|.+++..+..|+.+++|++|+|++|.+++..|..|.++++|++|++++|.++...+..|+++++|++|++++|++++..|
T Consensus 79 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~ 158 (390)
T 3o6n_A 79 LQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED 158 (390)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccCh
Confidence 99996667789999999999999999998888888999999999999999885444556888899999999999987777
Q ss_pred ccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCccccc
Q 036011 188 SEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITN 267 (977)
Q Consensus 188 ~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 267 (977)
..|+++++|++|++++|++++. .+..+++|+.|++++|.+++.. ..++|++|++++|+++.. |...
T Consensus 159 ~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~~--------~~~~L~~L~l~~n~l~~~-~~~~-- 224 (390)
T 3o6n_A 159 DTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTLA--------IPIAVEELDASHNSINVV-RGPV-- 224 (390)
T ss_dssp TTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEEE--------CCSSCSEEECCSSCCCEE-ECCC--
T ss_pred hhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccccC--------CCCcceEEECCCCeeeec-cccc--
Confidence 7888889999999998888754 2445566666666666655321 123455555555555532 2211
Q ss_pred ccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccc
Q 036011 268 ASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNF 347 (977)
Q Consensus 268 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~ 347 (977)
.++|++|++++|++++. ..+..+++|+.|++++|.++++.
T Consensus 225 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~-------------------------------------- 264 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIM-------------------------------------- 264 (390)
T ss_dssp CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEE--------------------------------------
T ss_pred cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcC--------------------------------------
Confidence 24455555555555432 23444444444444444444332
Q ss_pred cccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceee
Q 036011 348 SASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIR 427 (977)
Q Consensus 348 ~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 427 (977)
|..|..+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+
T Consensus 265 ------------------~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 265 ------------------YHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp ------------------SGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred ------------------hhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 2233344444444444444442 3333444555555555555554 3344445555555555
Q ss_pred ecCCccCCCchhhhcCCCCCCeeecCCCcCC
Q 036011 428 LNGNKLSGPIPQCLASLISLRELNLGSNKFS 458 (977)
Q Consensus 428 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 458 (977)
+++|+++.. + +..+++|+.|++++|.+.
T Consensus 325 L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 325 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEE
T ss_pred CCCCcccee-C--chhhccCCEEEcCCCCcc
Confidence 555555432 2 444555566666666555
No 261
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=335.07 Aligned_cols=267 Identities=21% Similarity=0.278 Sum_probs=196.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeee-----------
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCC----------- 749 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----------- 749 (977)
.++|++.+.||+|+||.||+|+.. +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467999999999999999999976 58999999998776666788999999999999999999999873
Q ss_pred ---cCCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeC-CCCceEEe
Q 036011 750 ---NNDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLD-EDMVAHVS 825 (977)
Q Consensus 750 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~ 825 (977)
+....++||||++ |+|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 6999999754 4899999999999999999999 78999999999999997 56799999
Q ss_pred ecccccccCCCCC-cceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC
Q 036011 826 DFGLSKLFDEGDD-SVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL 903 (977)
Q Consensus 826 Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 903 (977)
|||+++....... ........+|..|+|||++.+ ..++.++||||+|+++|||++|+.||......+ ....... ..
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~-~~ 241 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILE-SI 241 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH-HS
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-hc
Confidence 9999987653221 112233457999999998755 679999999999999999999999997643221 1111111 11
Q ss_pred CCc----hhhh-------cchhhhccccC-chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 904 PHG----LMEV-------VDTNLLRQEHT-SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 904 ~~~----~~~~-------~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
+.. ..+. ........... ......+...+.+++.+|++.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 110 0000 00000000000 00011235568899999999999999999999874
No 262
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.6e-36 Score=342.61 Aligned_cols=269 Identities=22% Similarity=0.310 Sum_probs=196.8
Q ss_pred cCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecCC------eeEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNND------FRAL 756 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~l 756 (977)
.+|++.+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 56899999999999999999987777799998764322 2347999999999999999999985433 3789
Q ss_pred EEeccCCCCHHHHhh--cCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeC-CCCceEEeeccccccc
Q 036011 757 VLELMPNGSLEKWLY--SDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLD-EDMVAHVSDFGLSKLF 833 (977)
Q Consensus 757 v~e~~~~gsL~~~l~--~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfgla~~~ 833 (977)
||||++++.+..... .....+++..+..++.||++||+||| +.||+||||||+||+++ .++.+||+|||+++..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999998754443322 22345899999999999999999999 78999999999999999 7999999999999877
Q ss_pred CCCCCcceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc--hhhh
Q 036011 834 DEGDDSVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG--LMEV 910 (977)
Q Consensus 834 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~ 910 (977)
..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.... ..+....+..-... ....
T Consensus 193 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHH
T ss_pred cCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHh
Confidence 54332 2234689999999988764 5999999999999999999999999764322 22222222110000 0000
Q ss_pred cchhhhccc----cCch----HHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH--HHchhh
Q 036011 911 VDTNLLRQE----HTSS----AEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK--LKKIKI 962 (977)
Q Consensus 911 ~~~~~~~~~----~~~~----~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~--L~~~~~ 962 (977)
.++...... .... ........+.+++.+||+.||.+|||+.|++++ +++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 011000000 0000 001134468899999999999999999999876 455443
No 263
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5e-36 Score=334.14 Aligned_cols=264 Identities=22% Similarity=0.287 Sum_probs=203.2
Q ss_pred hcCCCcCccccCcceEEEEEEEe-C-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCC------CcceEeeeeecCCe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-S-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHR------NLIKIFSSCCNNDF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~~~~~~ 753 (977)
.++|++.+.||+|+||+||+|.. . +++.||||++... ....+.+.+|+++++.++|+ +|+++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46799999999999999999986 3 6889999998754 34456788999999988765 49999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCCc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC--------------
Q 036011 754 RALVLELMPNGSLEKWLYSDNY-FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE-------------- 818 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~-------------- 818 (977)
.++||||+ +++|.+++..... .+++..+..++.|++.||+||| +.||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 8899999987653 5889999999999999999999 789999999999999987
Q ss_pred -----CCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc
Q 036011 819 -----DMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM 893 (977)
Q Consensus 819 -----~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 893 (977)
++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|||++|..||......+
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 241 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE- 241 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-
T ss_pred cccccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-
Confidence 6689999999998754322 23468999999999999999999999999999999999999997643221
Q ss_pred cHHHHHHh--hCCCchhhhcc-h----------------------hhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCC
Q 036011 894 SLKKWVKE--SLPHGLMEVVD-T----------------------NLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRI 948 (977)
Q Consensus 894 ~~~~~~~~--~~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 948 (977)
........ ..+..+..... . ..............+...+.+++.+||+.||.+||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 11111111 11110000000 0 00000000001123456789999999999999999
Q ss_pred CHHHHHHH
Q 036011 949 YMTDAAVK 956 (977)
Q Consensus 949 s~~ev~~~ 956 (977)
|+.|++++
T Consensus 322 t~~ell~h 329 (339)
T 1z57_A 322 TLREALKH 329 (339)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999764
No 264
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.7e-36 Score=325.87 Aligned_cols=252 Identities=27% Similarity=0.337 Sum_probs=202.9
Q ss_pred hhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 681 ATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 681 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
..++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999975 78999999987553 23456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCC---CceEEeecccccccC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDED---MVAHVSDFGLSKLFD 834 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfgla~~~~ 834 (977)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.+ +.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999887644 4899999999999999999999 7899999999999999754 479999999998765
Q ss_pred CCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchh
Q 036011 835 EGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTN 914 (977)
Q Consensus 835 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (977)
.... .....+++.|+|||++.+ .++.++||||+|+++|+|++|+.||......+ .............
T Consensus 176 ~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~-------- 242 (287)
T 2wei_A 176 QNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYAFD-------- 242 (287)
T ss_dssp CCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCC--------
T ss_pred CCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCC--------
Confidence 4322 223358899999998876 48999999999999999999999997642211 1111111111100
Q ss_pred hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 915 LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+....++..+.+++.+|++.+|++|||+.|++++
T Consensus 243 -------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 243 -------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp -------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 01111234467899999999999999999999874
No 265
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=346.95 Aligned_cols=268 Identities=22% Similarity=0.258 Sum_probs=183.3
Q ss_pred cCCCc-CccccCcceEEEEEEEeC---CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeee--cCCeeEE
Q 036011 683 DGFNE-CNLLGRGSFGSVYKGTFS---DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCC--NNDFRAL 756 (977)
Q Consensus 683 ~~~~~-~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 756 (977)
+.|++ .++||+|+||+||+|+.. +++.||||++.... ....+.+|++++++++||||+++++++. .....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34555 458999999999999965 57899999987542 2356889999999999999999999995 4678899
Q ss_pred EEeccCCCCHHHHhhcCC--------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee----CCCCceEE
Q 036011 757 VLELMPNGSLEKWLYSDN--------YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL----DEDMVAHV 824 (977)
Q Consensus 757 v~e~~~~gsL~~~l~~~~--------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl 824 (977)
||||+. |+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999996 58887775321 24899999999999999999999 7899999999999999 67889999
Q ss_pred eecccccccCCCCC-cceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcc--------ccc
Q 036011 825 SDFGLSKLFDEGDD-SVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTG--------EMS 894 (977)
Q Consensus 825 ~Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~--------~~~ 894 (977)
+|||+++.+..... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ...
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987754321 122334579999999999887 45999999999999999999999999654321 011
Q ss_pred HHHHHHhh-CCC--chhhhc---c-----hhhhccc-cCchHHH-------HHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 895 LKKWVKES-LPH--GLMEVV---D-----TNLLRQE-HTSSAEM-------DCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 895 ~~~~~~~~-~~~--~~~~~~---~-----~~~~~~~-~~~~~~~-------~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
+....... .+. .+..+. . ..+.... ....... .....+.+++.+||+.||.+|||++|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11111110 000 011000 0 0000000 0000000 01345789999999999999999999987
Q ss_pred H
Q 036011 956 K 956 (977)
Q Consensus 956 ~ 956 (977)
+
T Consensus 334 h 334 (405)
T 3rgf_A 334 D 334 (405)
T ss_dssp S
T ss_pred C
Confidence 5
No 266
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.8e-36 Score=337.07 Aligned_cols=201 Identities=24% Similarity=0.301 Sum_probs=173.0
Q ss_pred HhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-CC-----CcceEeeeeecCC
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-HR-----NLIKIFSSCCNND 752 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~ 752 (977)
...++|++.+.||+|+||+||+|+.. +++.||||++... ......+..|+++++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34578999999999999999999865 6889999999754 334566788999998885 55 4999999999999
Q ss_pred eeEEEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeC--CCCceEEeeccc
Q 036011 753 FRALVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLD--EDMVAHVSDFGL 829 (977)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~--~~~~~kl~Dfgl 829 (977)
..++||||++ |+|.+++.... ..+++..+..++.|++.||+|||. |+.||+||||||+|||++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 59999998754 358999999999999999999993 347899999999999995 578899999999
Q ss_pred ccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcC
Q 036011 830 SKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDM 888 (977)
Q Consensus 830 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 888 (977)
++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 208 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876432 22346899999999999999999999999999999999999999764
No 267
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.2e-36 Score=338.49 Aligned_cols=262 Identities=22% Similarity=0.272 Sum_probs=197.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCee----
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFR---- 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 754 (977)
.++|.+.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467889999999999999999865 68999999997643 33456788999999999999999999999876654
Q ss_pred --EEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 755 --ALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 755 --~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
++||||+. ++|.+++.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 688887743 3899999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh-CC-Cchhh
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES-LP-HGLME 909 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~ 909 (977)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+....... .+ .....
T Consensus 194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHT
T ss_pred cccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHH
Confidence 5432 233468999999999877 789999999999999999999999997643221 111111111 00 00000
Q ss_pred hcch--------hhhccccCc--hHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 910 VVDT--------NLLRQEHTS--SAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 910 ~~~~--------~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.... .+....... .....+...+.+++.+|++.||++|||++|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 000000000 0001234568899999999999999999999875
No 268
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.1e-36 Score=337.90 Aligned_cols=268 Identities=25% Similarity=0.285 Sum_probs=200.5
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecC-----Cee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN-----DFR 754 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 754 (977)
.++|.+.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999975 68999999986443 33456788999999999999999999987654 678
Q ss_pred EEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 755 ALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
++||||+. |+|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 6999998764 3899999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcc--------eeeccccCCcccCccccC-CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHh-hCC
Q 036011 835 EGDDSV--------TQTMTIATIGYMAPEYGT-EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKE-SLP 904 (977)
Q Consensus 835 ~~~~~~--------~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~~ 904 (977)
...... ......||+.|+|||++. +..++.++||||+||++|||++|+.||.+....+. +...... ..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCC
Confidence 432111 112246899999999865 47799999999999999999999999976432211 1111110 000
Q ss_pred C--c-hhhhcchh-------hhccccC--chHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 905 H--G-LMEVVDTN-------LLRQEHT--SSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 905 ~--~-~~~~~~~~-------~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
. . ........ +...... ......+...+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 0 00000000 0000000 00011234567899999999999999999999874
No 269
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4e-36 Score=333.02 Aligned_cols=269 Identities=26% Similarity=0.330 Sum_probs=202.5
Q ss_pred HhhcCCCcCccccCcceEEEEEEEe--CCCCEEEEEEeeccch--hhHHHHHHHHHHHHhc---CCCCcceEeeeee---
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTF--SDGTSFAIKVFNLQLD--RAFRSFDSECEVLRNV---RHRNLIKIFSSCC--- 749 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~--- 749 (977)
++.++|++.+.||+|+||+||+|+. .+|+.||||++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3567899999999999999999997 3688999999875532 2234567788877776 8999999999987
Q ss_pred --cCCeeEEEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEee
Q 036011 750 --NNDFRALVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSD 826 (977)
Q Consensus 750 --~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 826 (977)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEec
Confidence 4567889999997 69999987654 34899999999999999999999 78999999999999999999999999
Q ss_pred cccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhC-CC
Q 036011 827 FGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESL-PH 905 (977)
Q Consensus 827 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~ 905 (977)
||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ .+.......- +.
T Consensus 164 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 239 (326)
T 1blx_A 164 FGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPG 239 (326)
T ss_dssp CCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred CcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCC
Confidence 99998764321 2233468999999999999999999999999999999999999997643221 1222211110 00
Q ss_pred --chhhhc---chhhhccc--cCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 906 --GLMEVV---DTNLLRQE--HTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 906 --~~~~~~---~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+.... ...+.... .......++...+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 00000000 0000011234567899999999999999999999864
No 270
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.2e-36 Score=344.65 Aligned_cols=261 Identities=24% Similarity=0.316 Sum_probs=193.2
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeecC----C--eeE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCNN----D--FRA 755 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~--~~~ 755 (977)
.+|++.+.||+|+||+||+|++. +|+.||||++.... ....+|++++++++||||+++++++... + ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999975 69999999986542 2345799999999999999999988432 2 356
Q ss_pred EEEeccCCCCHHHHhhc---CCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCC-CceEEeeccccc
Q 036011 756 LVLELMPNGSLEKWLYS---DNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDED-MVAHVSDFGLSK 831 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfgla~ 831 (977)
+||||+++ ++.+.+.. ....+++..+..++.||++||+||| +.||+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999975 66655542 3446899999999999999999999 8999999999999999965 578999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccCCC-CcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc---h
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTEG-IVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG---L 907 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 907 (977)
.+..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.... ..+.++++..-... +
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 7654332 2234689999999998764 7999999999999999999999999764322 22222222110000 0
Q ss_pred hhhcchhhhc---cccCchH-----HHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 908 MEVVDTNLLR---QEHTSSA-----EMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 908 ~~~~~~~~~~---~~~~~~~-----~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
... ++.... ....... .......+.+++.+||+.||++||++.|++++
T Consensus 282 ~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred Hhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000 000000 0000000 01123567899999999999999999999864
No 271
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.7e-35 Score=352.11 Aligned_cols=347 Identities=16% Similarity=0.130 Sum_probs=209.6
Q ss_pred CCCCCCCCCCc----ccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEe
Q 036011 29 NNWSISQPICK----WVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFIS 104 (977)
Q Consensus 29 ~~w~~~~~~c~----w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 104 (977)
++|.++.+||. |.++.|+. .++....... .+..--.+++++.|++++|.++...+..|.++++|++|+
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~------~i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~ 81 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDV------HIDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLN 81 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSC------EECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEE
T ss_pred cCCCCCCcCcccCcCceeEecCc------eecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEE
Confidence 58988888874 66555542 1222222221 111122467888888888888885555677888888888
Q ss_pred CcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccc
Q 036011 105 LDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQG 184 (977)
Q Consensus 105 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~ 184 (977)
|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|++|.+++
T Consensus 82 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~ 161 (597)
T 3oja_B 82 LNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER 161 (597)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCC
Confidence 88888887667788888888888888888887777777777777777777777775444555677777777777777776
Q ss_pred cCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcc
Q 036011 185 EIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNS 264 (977)
Q Consensus 185 ~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 264 (977)
..|..|+++++|+.|++++|++++.. + ..+++|+.|++++|.+++.
T Consensus 162 ~~~~~~~~l~~L~~L~L~~N~l~~~~---~---------------------------~~l~~L~~L~l~~n~l~~l---- 207 (597)
T 3oja_B 162 IEDDTFQATTSLQNLQLSSNRLTHVD---L---------------------------SLIPSLFHANVSYNLLSTL---- 207 (597)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSBCC---G---------------------------GGCTTCSEEECCSSCCSEE----
T ss_pred CChhhhhcCCcCcEEECcCCCCCCcC---h---------------------------hhhhhhhhhhcccCccccc----
Confidence 66666666777777766666665321 1 1234444555554444421
Q ss_pred cccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCccc
Q 036011 265 ITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVI 344 (977)
Q Consensus 265 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 344 (977)
....+|++|++++|.++...+.. . ++|+.|++
T Consensus 208 -~~~~~L~~L~ls~n~l~~~~~~~---~-------------------------------~~L~~L~L------------- 239 (597)
T 3oja_B 208 -AIPIAVEELDASHNSINVVRGPV---N-------------------------------VELTILKL------------- 239 (597)
T ss_dssp -ECCTTCSEEECCSSCCCEEECSC---C-------------------------------SCCCEEEC-------------
T ss_pred -cCCchhheeeccCCccccccccc---C-------------------------------CCCCEEEC-------------
Confidence 12234455555555544321110 0 12233333
Q ss_pred ccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccc
Q 036011 345 GNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLN 424 (977)
Q Consensus 345 ~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 424 (977)
++|.+++ +..++.+++|++|+|++|.+++..|..|..+++|+
T Consensus 240 ------------------------------------~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 281 (597)
T 3oja_B 240 ------------------------------------QHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 281 (597)
T ss_dssp ------------------------------------CSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred ------------------------------------CCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCC
Confidence 3333322 13344445555555555555555555555555555
Q ss_pred eeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCc
Q 036011 425 GIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQ 504 (977)
Q Consensus 425 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 504 (977)
.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.|++. | +..+++|+.|+|++|.
T Consensus 282 ~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~ 356 (597)
T 3oja_B 282 RLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHND 356 (597)
T ss_dssp EEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSC
T ss_pred EEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCC
Confidence 55555555553 3444555666777777777766 4556666677777777777777643 2 5667788899999998
Q ss_pred CCCC
Q 036011 505 LSGD 508 (977)
Q Consensus 505 l~~~ 508 (977)
+++.
T Consensus 357 ~~~~ 360 (597)
T 3oja_B 357 WDCN 360 (597)
T ss_dssp EEHH
T ss_pred CCCh
Confidence 8743
No 272
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-35 Score=334.92 Aligned_cols=317 Identities=22% Similarity=0.244 Sum_probs=194.2
Q ss_pred CCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhh
Q 036011 237 PPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSF 316 (977)
Q Consensus 237 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 316 (977)
|+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|++++|.++.+++..
T Consensus 61 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~---- 136 (390)
T 3o6n_A 61 PAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGI---- 136 (390)
T ss_dssp CTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT----
T ss_pred ChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHH----
Confidence 3333334444444444444444444444555555555555555555444444555555555555555555444322
Q ss_pred hcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhcc
Q 036011 317 LSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRL 396 (977)
Q Consensus 317 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 396 (977)
+..+++|++|++++|.+.+ ..|..+..+++|++|++++|.+++. .+..+
T Consensus 137 ---~~~l~~L~~L~L~~n~l~~-------------------------~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l 185 (390)
T 3o6n_A 137 ---FHNTPKLTTLSMSNNNLER-------------------------IEDDTFQATTSLQNLQLSSNRLTHV---DLSLI 185 (390)
T ss_dssp ---TTTCTTCCEEECCSSCCCB-------------------------CCTTTTSSCTTCCEEECCSSCCSBC---CGGGC
T ss_pred ---hcCCCCCcEEECCCCccCc-------------------------cChhhccCCCCCCEEECCCCcCCcc---ccccc
Confidence 3444455555555544432 2233455556666666666666543 24556
Q ss_pred CCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEc
Q 036011 397 EQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNL 476 (977)
Q Consensus 397 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 476 (977)
++|+.|++++|.+++ +....+|+.|++++|++... |.. ..++|+.|++++|++++. ..+..+++|+.|++
T Consensus 186 ~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 255 (390)
T 3o6n_A 186 PSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDL 255 (390)
T ss_dssp TTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred cccceeecccccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEEC
Confidence 667777777776653 22334677777777777633 332 235777777777777753 46777777888888
Q ss_pred cCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCC
Q 036011 477 SSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGE 556 (977)
Q Consensus 477 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 556 (977)
++|.+++..|..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++.
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~- 332 (390)
T 3o6n_A 256 SYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT- 332 (390)
T ss_dssp CSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-
T ss_pred CCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce-
Confidence 888877777777777888888888888887 45666677788888888888887 456667778888888888888874
Q ss_pred CCcccccccccCccccCCCcccccCCCCCCCCcCCCCCcccCccccCC
Q 036011 557 IPKSLEALLFLKQLNVSHNKLEGEIPANGPFKYFAPQSFSWNYALCGP 604 (977)
Q Consensus 557 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg~ 604 (977)
+| +..+++|+.|++++|++++.... ..+..+....+.++...|+.
T Consensus 333 ~~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 333 LK--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp CC--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCT
T ss_pred eC--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecc
Confidence 33 66777888888888888775432 22344444556666666754
No 273
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.9e-36 Score=330.44 Aligned_cols=252 Identities=25% Similarity=0.289 Sum_probs=182.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch--hhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD--RAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356888999999999999999975 799999999976532 22334555666788889999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHST-PVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
||+ ++.+..+.......+++..+..++.|+++||+||| +. ||+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 55666666554456899999999999999999999 54 99999999999999999999999999998765432
Q ss_pred CcceeeccccCCcccCccccC-----CCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcc
Q 036011 838 DSVTQTMTIATIGYMAPEYGT-----EGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVD 912 (977)
Q Consensus 838 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (977)
......|++.|+|||++. ...++.++||||+|+++|||++|+.||..................+.
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------- 249 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL------- 249 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC-------
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC-------
Confidence 122346999999999984 56788999999999999999999999975332221111111111000
Q ss_pred hhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 913 TNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
+ +....+...+.+++.+||+.||.+||+++|++++
T Consensus 250 --~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 250 --L-------PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --C-------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --C-------CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 0001123457899999999999999999999763
No 274
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=8.4e-36 Score=342.74 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=187.5
Q ss_pred CCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEEEEeccC
Q 036011 684 GFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRALVLELMP 762 (977)
Q Consensus 684 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 762 (977)
.|...+.||+|+||+||.+...+|+.||||++..+. .+.+.+|+++++++ +||||+++++++.+.+..++||||+.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 345568899999999987766689999999987542 34578899999986 89999999999999999999999995
Q ss_pred CCCHHHHhhcCCcc------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCC-------------CceE
Q 036011 763 NGSLEKWLYSDNYF------LDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDED-------------MVAH 823 (977)
Q Consensus 763 ~gsL~~~l~~~~~~------~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~-------------~~~k 823 (977)
|+|.+++...... .++..++.++.||+.||+||| +.+|+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 6999999865431 123345789999999999999 7899999999999999754 4899
Q ss_pred EeecccccccCCCCCcc--eeeccccCCcccCccccCC-------CCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccc
Q 036011 824 VSDFGLSKLFDEGDDSV--TQTMTIATIGYMAPEYGTE-------GIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEM 893 (977)
Q Consensus 824 l~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~ 893 (977)
|+|||+++......... ......||++|+|||++.+ ..++.++||||+||++|||++ |+.||.+....+
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~- 247 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE- 247 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence 99999999876543221 1234579999999999865 678999999999999999999 999997543222
Q ss_pred cHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 894 SLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
..+........ .........+...+.+++.+||+.||.+|||+.|+++
T Consensus 248 --~~i~~~~~~~~------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 --SNIIRGIFSLD------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHTCCCCC------------CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHhcCCCCcc------------cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 12221111100 0001112245667899999999999999999999976
No 275
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=333.09 Aligned_cols=262 Identities=22% Similarity=0.271 Sum_probs=196.7
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCe-----
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDF----- 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 753 (977)
.++|.+.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 367899999999999999999975 69999999987543 3345678899999999999999999999987654
Q ss_pred -eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 754 -RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 754 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
.++||||+. |+|.+++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 688887743 3899999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCcceeeccccCCcccCccccCC-CCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh-CC-Cchhh
Q 036011 833 FDEGDDSVTQTMTIATIGYMAPEYGTE-GIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES-LP-HGLME 909 (977)
Q Consensus 833 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~ 909 (977)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+....... .+ ..+..
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 5432 223468999999998876 678999999999999999999999997643211 111111110 00 00000
Q ss_pred hcch--------hhhcc--ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 910 VVDT--------NLLRQ--EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 910 ~~~~--------~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.... .+... .........+...+.+++.+|++.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 00000 00000011234568899999999999999999999865
No 276
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.4e-35 Score=325.66 Aligned_cols=254 Identities=35% Similarity=0.543 Sum_probs=238.5
Q ss_pred cccccccccCcccc--cCCccccccccccEEEeec-CccCCCCChhhhccCCCCEEEeecccccCcccccccccccccee
Q 036011 350 SLQNFYAYDCKLTG--NIPHEIGNLRSLIVLSLFI-NALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGI 426 (977)
Q Consensus 350 ~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 426 (977)
.++.|++.+|.+++ .+|..+..+++|++|++++ |.+.+.+|..|+.+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 46666666666766 7788899999999999995 99999999999999999999999999999999999999999999
Q ss_pred eecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcc-cCceEEccCCCCCCCCccccccccccCeeeCcCCcC
Q 036011 427 RLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLE-YLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQL 505 (977)
Q Consensus 427 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 505 (977)
++++|++++.+|..+..+++|++|+|++|++++.+|..+..++ +|+.|++++|++++..|..|..+. |++|+|++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 9999999999999999999999999999999999999999998 999999999999999999999997 99999999999
Q ss_pred CCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCCCCC
Q 036011 506 SGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIPANG 585 (977)
Q Consensus 506 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 585 (977)
++.+|..|+.+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|++++|+++|.+|..+
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999977766 8899999999999999999999999999999999999999999999988
Q ss_pred CCCcCCCCCcccCccccCCC
Q 036011 586 PFKYFAPQSFSWNYALCGPT 605 (977)
Q Consensus 586 ~~~~~~~~~~~~n~~lcg~~ 605 (977)
.+..+....+.+|+++||.|
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTT
T ss_pred cccccChHHhcCCCCccCCC
Confidence 88888888999999999987
No 277
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.2e-36 Score=332.93 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=177.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHH-HHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECE-VLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367889999999999999999975 78999999997653 233345555655 777789999999999999999999999
Q ss_pred eccCCCCHHHHhhc----CCccCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 759 ELMPNGSLEKWLYS----DNYFLDLLERLNIMIGVALALEYLHHGHST-PVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 759 e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
||+++ +|.+++.. ....+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 88877753 2345899999999999999999999 66 9999999999999999999999999999876
Q ss_pred CCCCCcceeeccccCCcccCcccc----CCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhh
Q 036011 834 DEGDDSVTQTMTIATIGYMAPEYG----TEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLME 909 (977)
Q Consensus 834 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (977)
.... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||....... ..........
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~--- 246 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQLTQVVKGD--- 246 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSC---
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HHHHHHhcCC---
Confidence 5432 12233699999999998 46678999999999999999999999997532111 0000000000
Q ss_pred hcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 910 VVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.+.+... ....+...+.+++.+||+.||++|||+.|++++
T Consensus 247 --~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 247 --PPQLSNS-----EEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp --CCCCCCC-----SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --CCCCCCc-----ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000000 001124467899999999999999999999763
No 278
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.3e-35 Score=331.02 Aligned_cols=264 Identities=22% Similarity=0.282 Sum_probs=199.6
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CC-CEEEEEEeeccchhhHHHHHHHHHHHHhcCCCC------cceEeeeeecCCe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DG-TSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRN------LIKIFSSCCNNDF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 753 (977)
.++|++.+.||+|+||+||+|+.. ++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 467999999999999999999864 34 68999999754 344567888999999997665 8999999999999
Q ss_pred eEEEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee----------------
Q 036011 754 RALVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL---------------- 816 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---------------- 816 (977)
.++||||+ ++++.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 567766666543 46899999999999999999999 8899999999999999
Q ss_pred ---CCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccc
Q 036011 817 ---DEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEM 893 (977)
Q Consensus 817 ---~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 893 (977)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|||++|+.||......+
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 246 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE- 246 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred ccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 567899999999998754322 23469999999999999999999999999999999999999997643221
Q ss_pred cHHHHHH--hhCCCchhh-hcchh----------------------hhccccCchHHHHHHHHHHHHHHHhhcCCCCCCC
Q 036011 894 SLKKWVK--ESLPHGLME-VVDTN----------------------LLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRI 948 (977)
Q Consensus 894 ~~~~~~~--~~~~~~~~~-~~~~~----------------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 948 (977)
....... ...+..+.. ..... .................+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 1111111 111111000 00000 0000000000112345688999999999999999
Q ss_pred CHHHHHHH
Q 036011 949 YMTDAAVK 956 (977)
Q Consensus 949 s~~ev~~~ 956 (977)
|+.|++++
T Consensus 327 t~~e~l~h 334 (355)
T 2eu9_A 327 TLAEALLH 334 (355)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999754
No 279
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.8e-35 Score=353.24 Aligned_cols=319 Identities=23% Similarity=0.240 Sum_probs=223.4
Q ss_pred CCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhh
Q 036011 236 LPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWS 315 (977)
Q Consensus 236 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 315 (977)
+|+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++++|..|+++++|++|+|++|.++.+++..
T Consensus 66 lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~--- 142 (597)
T 3oja_B 66 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGI--- 142 (597)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT---
T ss_pred cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHH---
Confidence 34444444555555555555555555555555566666666666665555555556666666666666655554432
Q ss_pred hhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhc
Q 036011 316 FLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGR 395 (977)
Q Consensus 316 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 395 (977)
+..+++|++|++++|.+.+ ..|..|+.+++|++|++++|.+++.. ++.
T Consensus 143 ----~~~l~~L~~L~Ls~N~l~~-------------------------~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~ 190 (597)
T 3oja_B 143 ----FHNTPKLTTLSMSNNNLER-------------------------IEDDTFQATTSLQNLQLSSNRLTHVD---LSL 190 (597)
T ss_dssp ----TTTCTTCCEEECCSSCCCB-------------------------CCTTTTTTCTTCCEEECTTSCCSBCC---GGG
T ss_pred ----hccCCCCCEEEeeCCcCCC-------------------------CChhhhhcCCcCcEEECcCCCCCCcC---hhh
Confidence 4455555555555555443 33344566667777777777776432 455
Q ss_pred cCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEE
Q 036011 396 LEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVN 475 (977)
Q Consensus 396 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 475 (977)
+++|+.|++++|.+++ +....+|+.|++++|.++.. +..+ .++|+.|+|++|.+++ +..+..+++|+.|+
T Consensus 191 l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~ 260 (597)
T 3oja_B 191 IPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVD 260 (597)
T ss_dssp CTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEE
T ss_pred hhhhhhhhcccCcccc-----ccCCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEE
Confidence 6777777887777763 23345778888888887733 3322 2578888888888885 46788888899999
Q ss_pred ccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCC
Q 036011 476 LSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 476 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 555 (977)
|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++
T Consensus 261 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 261 LSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 338 (597)
T ss_dssp CCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred CCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCC
Confidence 99999888888888889999999999999984 6777788899999999999998 577788889999999999999985
Q ss_pred CCCcccccccccCccccCCCcccccCCCCCCCCcCCCCCcccCccccCCC
Q 036011 556 EIPKSLEALLFLKQLNVSHNKLEGEIPANGPFKYFAPQSFSWNYALCGPT 605 (977)
Q Consensus 556 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg~~ 605 (977)
. | +..+++|+.|++++|+|+|..+. ..+..+....+.++...|+.+
T Consensus 339 ~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 339 L-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp C-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred c-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 4 3 66788999999999999887543 245566666778888899864
No 280
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.1e-35 Score=330.26 Aligned_cols=252 Identities=21% Similarity=0.258 Sum_probs=173.0
Q ss_pred hcCCCcCc-cccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeeeeec----CCeeE
Q 036011 682 TDGFNECN-LLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSSCCN----NDFRA 755 (977)
Q Consensus 682 ~~~~~~~~-~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 755 (977)
.++|.+.+ .||+|+||+||+|+.. +|+.||||++.... ....+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 46788855 6999999999999976 69999999986532 122233344566799999999999876 44578
Q ss_pred EEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC---CCceEEeeccccc
Q 036011 756 LVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE---DMVAHVSDFGLSK 831 (977)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~ 831 (977)
+||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998764 36899999999999999999999 789999999999999986 4559999999998
Q ss_pred ccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhc
Q 036011 832 LFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVV 911 (977)
Q Consensus 832 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (977)
...... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.......... .. .......
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~-~~~~~~~----- 248 (336)
T 3fhr_A 180 ETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-GM-KRRIRLG----- 248 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-hH-HHhhhcc-----
Confidence 664322 223468999999999999999999999999999999999999996543221100 00 0000000
Q ss_pred chhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 912 DTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
... ........+...+.+++.+|++.||.+|||+.|++++
T Consensus 249 --~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 --QYG---FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ----C---CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred --ccc---cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 0000011234467899999999999999999999874
No 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=327.53 Aligned_cols=246 Identities=24% Similarity=0.282 Sum_probs=191.3
Q ss_pred HHHHhhcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccch------hhHHHHHHHHHHHHhc----CCCCcceEe
Q 036011 677 DIQRATDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD------RAFRSFDSECEVLRNV----RHRNLIKIF 745 (977)
Q Consensus 677 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~niv~l~ 745 (977)
+.....++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+++++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 34455688999999999999999999864 789999999975532 1234466799999998 899999999
Q ss_pred eeeecCCeeEEEEec-cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeC-CCCceE
Q 036011 746 SSCCNNDFRALVLEL-MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLD-EDMVAH 823 (977)
Q Consensus 746 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-~~~~~k 823 (977)
+++.+.+..++|||| +.+++|.+++.... .+++..++.++.||++||+||| +.+|+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 78999999997654 4899999999999999999999 78999999999999999 899999
Q ss_pred EeecccccccCCCCCcceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhh
Q 036011 824 VSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKES 902 (977)
Q Consensus 824 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 902 (977)
|+|||++....... .....|++.|+|||++.+..+ +.++||||+|+++|||++|+.||.... .....
T Consensus 181 l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~- 248 (312)
T 2iwi_A 181 LIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILEA- 248 (312)
T ss_dssp ECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHT-
T ss_pred EEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhhh-
Confidence 99999998775432 223458999999998877666 458999999999999999999986421 11110
Q ss_pred CCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 903 LPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..... ..+...+.+++.+||+.+|++|||+.|++++
T Consensus 249 -----------~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 249 -----------ELHFP-------AHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -----------CCCCC-------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----------ccCCc-------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0123457889999999999999999999874
No 282
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.9e-36 Score=337.32 Aligned_cols=265 Identities=19% Similarity=0.258 Sum_probs=198.6
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-----------CCCcceEeeeee
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-----------HRNLIKIFSSCC 749 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~ 749 (977)
.++|++.+.||+|+||+||+|+. .+++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 36799999999999999999996 47899999998754 334467889999999886 899999999987
Q ss_pred cCC----eeEEEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCceeeC------
Q 036011 750 NND----FRALVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHST-PVVHCDLKPSNILLD------ 817 (977)
Q Consensus 750 ~~~----~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~dlk~~NIll~------ 817 (977)
..+ ..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| ++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 644 788999999 899999998643 35899999999999999999999 66 999999999999994
Q ss_pred CCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCccc-----
Q 036011 818 EDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGE----- 892 (977)
Q Consensus 818 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~----- 892 (977)
..+.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999876532 223468999999999999999999999999999999999999997543211
Q ss_pred ccHHHHHHhh--CCCchh-------hhcch-hhhcc-------------ccCchHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 036011 893 MSLKKWVKES--LPHGLM-------EVVDT-NLLRQ-------------EHTSSAEMDCLLSVLHLALDCCMESPDQRIY 949 (977)
Q Consensus 893 ~~~~~~~~~~--~~~~~~-------~~~~~-~~~~~-------------~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs 949 (977)
..+....... .+..+. ..+.. ..... .........+...+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111111100 000000 00000 00000 0000112346677899999999999999999
Q ss_pred HHHHHHH
Q 036011 950 MTDAAVK 956 (977)
Q Consensus 950 ~~ev~~~ 956 (977)
++|++++
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999874
No 283
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.1e-35 Score=328.25 Aligned_cols=243 Identities=23% Similarity=0.250 Sum_probs=199.2
Q ss_pred HhhcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccchh------hHHHHHHHHHHHHhcC--CCCcceEeeeeec
Q 036011 680 RATDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLDR------AFRSFDSECEVLRNVR--HRNLIKIFSSCCN 750 (977)
Q Consensus 680 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~ 750 (977)
...++|++.+.||+|+||+||+|+. .+++.||||++...... ..+.+.+|+.++++++ ||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3457899999999999999999986 47899999998765321 2345778999999996 5999999999999
Q ss_pred CCeeEEEEeccCC-CCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeC-CCCceEEeecc
Q 036011 751 NDFRALVLELMPN-GSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLD-EDMVAHVSDFG 828 (977)
Q Consensus 751 ~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg 828 (977)
.+..++||||+.+ ++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999976 89999997644 4899999999999999999999 78999999999999999 78999999999
Q ss_pred cccccCCCCCcceeeccccCCcccCccccCCCCc-CcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCch
Q 036011 829 LSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIV-SSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGL 907 (977)
Q Consensus 829 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (977)
+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .......
T Consensus 196 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~~~---- 260 (320)
T 3a99_A 196 SGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQV---- 260 (320)
T ss_dssp TCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHCCC----
T ss_pred ccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhcccc----
Confidence 998775432 223459999999999877665 688999999999999999999986421 1111000
Q ss_pred hhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 908 MEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
.... .+...+.+++.+||+.||++|||++|++++
T Consensus 261 --------~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 261 --------FFRQ-------RVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --------CCSS-------CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --------cccc-------cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 123457899999999999999999999874
No 284
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=340.55 Aligned_cols=250 Identities=24% Similarity=0.341 Sum_probs=188.1
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEEEEec
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 760 (977)
..+|...+.||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +||||+++++++.+....++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 34688889999999999765555679999999986542 23467899999999 799999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC-----CCceEEeecccccccCC
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE-----DMVAHVSDFGLSKLFDE 835 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~-----~~~~kl~Dfgla~~~~~ 835 (977)
+. |+|.+++........+..+..++.||++||+||| +.+|+||||||+||+++. ...+||+|||+++....
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 96 6999999877655666677899999999999999 789999999999999953 33688999999987754
Q ss_pred CCCc-ceeeccccCCcccCccccC---CCCcCcccchhhHhHHHHHHhc-CCCCCCcCCcccccHHHHHHhhCCCchhhh
Q 036011 836 GDDS-VTQTMTIATIGYMAPEYGT---EGIVSSKCDVYSYGVLLTETFT-RKKPTDDMFTGEMSLKKWVKESLPHGLMEV 910 (977)
Q Consensus 836 ~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (977)
.... ......+||++|+|||++. ...++.++||||+||++|||++ |..||....... .... ........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~~~~---~~~~~~~~ 249 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---ANIL---LGACSLDC 249 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---HHHH---TTCCCCTT
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---HHHH---hccCCccc
Confidence 3221 2233457999999999987 4667889999999999999999 888885432211 1110 00000000
Q ss_pred cchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 036011 911 VDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAV 955 (977)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~ 955 (977)
. .........+.+++.+||+.||.+|||+.|+++
T Consensus 250 ~-----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 L-----------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp S-----------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c-----------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0 001123345678999999999999999999984
No 285
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-35 Score=349.43 Aligned_cols=270 Identities=22% Similarity=0.268 Sum_probs=201.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeec------CCe
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCN------NDF 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 753 (977)
.++|++.+.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 378999999999999999999874 68999999987543 4446779999999999999999999998765 667
Q ss_pred eEEEEeccCCCCHHHHhhcCCc--cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCc---eEEeecc
Q 036011 754 RALVLELMPNGSLEKWLYSDNY--FLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMV---AHVSDFG 828 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfg 828 (977)
.++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999986542 5889999999999999999999 789999999999999997664 9999999
Q ss_pred cccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCc--
Q 036011 829 LSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHG-- 906 (977)
Q Consensus 829 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 906 (977)
++........ .....||+.|+|||++.+..++.++||||+|+++|||++|..||..... ...|........
T Consensus 170 ~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC-----
T ss_pred cccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccch
Confidence 9987754332 2335699999999999999999999999999999999999999965321 122211111100
Q ss_pred ---hhhhcchhhhcc---ccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHH-----HHHHHHchh
Q 036011 907 ---LMEVVDTNLLRQ---EHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTD-----AAVKLKKIK 961 (977)
Q Consensus 907 ---~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~e-----v~~~L~~~~ 961 (977)
..+......... +............+.+++.+|++.||++|||+.| ..+.++.+.
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 000000000000 0011111234567899999999999999999987 344454444
No 286
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=5.6e-35 Score=322.72 Aligned_cols=282 Identities=22% Similarity=0.286 Sum_probs=217.1
Q ss_pred cChHHHHHHHHHHHHhcc-CCCCCccCCC----CCCCCCCcccceEec--------CCCCcEEEEEcCCCCCCccCCccc
Q 036011 4 QNLTTDQFALLAFKAHVT-DPQSVLANNW----SISQPICKWVGISCG--------ARHQRVRALNLSNMGLRGTIPPHL 70 (977)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~-~~~~~~~~~w----~~~~~~c~w~gv~c~--------~~~~~v~~L~l~~~~l~~~~~~~l 70 (977)
.++.+|+.||++||.++. ++..+. .+| ..+.++|.|.|++|. ....+|+.|+|++++++ .+|+.+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~-~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWH-SAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHH-HHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred ccCchHHHHHHHHHHhccCCchhhh-hhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 356789999999999995 665555 589 557889999999995 34568999999999998 899999
Q ss_pred cCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccc
Q 036011 71 GNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEK 150 (977)
Q Consensus 71 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 150 (977)
+++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..+...
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~----- 173 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST----- 173 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE-----
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc-----
Confidence 99999999999999999 58999999999999999999999 889999999999999999999998998877641
Q ss_pred eeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcc
Q 036011 151 WDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQL 230 (977)
Q Consensus 151 L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 230 (977)
.++..|+++++|++|+|++|+++ .+|..++++++|++|+|++|++++ ++..+..+++|+.|+|++|.+
T Consensus 174 ----------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~ 241 (328)
T 4fcg_A 174 ----------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTA 241 (328)
T ss_dssp ----------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTT
T ss_pred ----------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcc
Confidence 12233445556666666666665 555556666666666666666653 344455566666666666555
Q ss_pred cccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCC
Q 036011 231 SGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDS 309 (977)
Q Consensus 231 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 309 (977)
.+. .+..+..+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..++.+++|+.+++..|.+....
T Consensus 242 ~~~---~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l~ 317 (328)
T 4fcg_A 242 LRN---YPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLD 317 (328)
T ss_dssp CCB---CCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC--
T ss_pred hhh---hHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHHh
Confidence 532 2344556778888888888777788888888888999999998888888888888888888888888766543
No 287
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.2e-34 Score=311.58 Aligned_cols=230 Identities=13% Similarity=0.074 Sum_probs=184.8
Q ss_pred cCCCcCccccCcceEEEEEEEeC-CCCEEEEEEeeccc---hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEEE
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQL---DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 758 (977)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++.+++++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 67999999999999999999975 58999999997653 234577899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||+++++|.++++.. ....++.+++.|++.||+||| +.||+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999999643 356678899999999999999 7899999999999999999999997443
Q ss_pred cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhcc
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQ 918 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (977)
|++| ++.++||||+||++|||+||+.||.+....+. +.. ........
T Consensus 175 ------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-------------~~~-~~~~~~~~ 221 (286)
T 3uqc_A 175 ------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-------------LAP-AERDTAGQ 221 (286)
T ss_dssp ------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-------------SEE-CCBCTTSC
T ss_pred ------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-------------hHH-HHHHhccC
Confidence 4433 68899999999999999999999976433210 000 00000000
Q ss_pred cc-CchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHchhh
Q 036011 919 EH-TSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVKLKKIKI 962 (977)
Q Consensus 919 ~~-~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~L~~~~~ 962 (977)
.. ......+++..+.+++.+||+.||++| |+.|+++.|+++..
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00 001111244568899999999999999 99999999998774
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.4e-33 Score=312.31 Aligned_cols=174 Identities=28% Similarity=0.404 Sum_probs=88.8
Q ss_pred hhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCc
Q 036011 393 VGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLL 472 (977)
Q Consensus 393 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 472 (977)
+..+++|++|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|++|++++|++++..+ +..+++|+
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~ 246 (347)
T 4fmz_A 173 IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLT 246 (347)
T ss_dssp GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCC
T ss_pred hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCC
Confidence 3344444444444444442221 4444444444444444443322 4444555555555555553222 44555555
Q ss_pred eEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCc
Q 036011 473 AVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNN 552 (977)
Q Consensus 473 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 552 (977)
.|++++|.+++. +.+..+++|++|++++|++++ + ..+..+++|+.|+|++|++++..|..++.+++|+.|+|++|+
T Consensus 247 ~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 247 WLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp EEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS
T ss_pred EEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc
Confidence 555555555532 345555556666666665553 2 235556666666666666665555556666666666666666
Q ss_pred cCCCCCcccccccccCccccCCCccc
Q 036011 553 LSGEIPKSLEALLFLKQLNVSHNKLE 578 (977)
Q Consensus 553 l~~~~p~~~~~l~~L~~L~l~~N~l~ 578 (977)
+++..| +..+++|++|++++|+++
T Consensus 323 l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 323 ITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCCCGG--GGGCTTCSEESSSCC---
T ss_pred cccccC--hhhhhccceeehhhhccc
Confidence 664433 556666666666666653
No 289
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.6e-33 Score=313.30 Aligned_cols=308 Identities=29% Similarity=0.418 Sum_probs=256.8
Q ss_pred hhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccc
Q 036011 213 SIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNL 292 (977)
Q Consensus 213 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 292 (977)
.+..+++|+.|++++|.+.. ++. +..+++|++|++++|++++. +. +..+++|++|++++|.++.. ..|..+
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~---~~~--~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l 109 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS---IQG--IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNL 109 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC---CTT--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred cchhcccccEEEEeCCcccc---chh--hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCC
Confidence 45678899999999999873 432 56789999999999999854 44 88999999999999999865 368999
Q ss_pred cccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCcccccc
Q 036011 293 RFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNL 372 (977)
Q Consensus 293 ~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l 372 (977)
++|++|++++|.++.+++ +..+++|++|++++|.....++. +..+ .+|++|++.+|.+.+..+ +..+
T Consensus 110 ~~L~~L~l~~n~i~~~~~---------~~~l~~L~~L~l~~n~~~~~~~~-~~~l-~~L~~L~l~~~~~~~~~~--~~~l 176 (347)
T 4fmz_A 110 TNLRELYLNEDNISDISP---------LANLTKMYSLNLGANHNLSDLSP-LSNM-TGLNYLTVTESKVKDVTP--IANL 176 (347)
T ss_dssp TTCSEEECTTSCCCCCGG---------GTTCTTCCEEECTTCTTCCCCGG-GTTC-TTCCEEECCSSCCCCCGG--GGGC
T ss_pred CcCCEEECcCCcccCchh---------hccCCceeEEECCCCCCcccccc-hhhC-CCCcEEEecCCCcCCchh--hccC
Confidence 999999999999887542 67889999999999976655544 3333 479999999999886544 8889
Q ss_pred ccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeec
Q 036011 373 RSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNL 452 (977)
Q Consensus 373 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 452 (977)
++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|++
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEEC
Confidence 999999999999985443 8889999999999999986554 8889999999999999986544 888999999999
Q ss_pred CCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcccccc
Q 036011 453 GSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGP 532 (977)
Q Consensus 453 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 532 (977)
++|++++. ..+..+++|+.|++++|++++. ..+..+++|++|++++|++++..|..++.+++|+.|+|++|++++.
T Consensus 251 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 251 GTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred CCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 99999864 5688899999999999999864 4688899999999999999988888899999999999999999977
Q ss_pred ccccccCccccCeeeccCCccC
Q 036011 533 IPQTFGSLTGLESLDLSNNNLS 554 (977)
Q Consensus 533 ~p~~~~~l~~L~~L~Ls~N~l~ 554 (977)
.| +..+++|+.||+++|+|+
T Consensus 327 ~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 327 RP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GG--GGGCTTCSEESSSCC---
T ss_pred cC--hhhhhccceeehhhhccc
Confidence 66 888999999999999886
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-34 Score=348.63 Aligned_cols=239 Identities=22% Similarity=0.293 Sum_probs=192.9
Q ss_pred hcCCCcCccccCcceEEEEEEEeC--CCCEEEEEEeeccc-hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCe-----
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFS--DGTSFAIKVFNLQL-DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDF----- 753 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 753 (977)
.++|++.+.||+|+||+||+|++. +|+.||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999975 68999999986543 3445678899999999999999999999987655
Q ss_pred eEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 754 RALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.|+||||+++++|.+++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999988755 4899999999999999999999 7899999999999999985 9999999999876
Q ss_pred CCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcch
Q 036011 834 DEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDT 913 (977)
Q Consensus 834 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (977)
... ....||++|+|||++.++. +.++|||||||++|||++|..||........ +
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~--------- 285 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------P--------- 285 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------C---------
T ss_pred ccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------c---------
Confidence 542 2346999999999887654 8999999999999999999988764221110 0
Q ss_pred hhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCC-HHHHHHHHHch
Q 036011 914 NLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIY-MTDAAVKLKKI 960 (977)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-~~ev~~~L~~~ 960 (977)
...........+.+++.+||+.||.+||+ ++++.+.+.++
T Consensus 286 -------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 286 -------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp -------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred -------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 00111223456789999999999999995 56666666543
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.7e-33 Score=307.52 Aligned_cols=231 Identities=21% Similarity=0.290 Sum_probs=179.7
Q ss_pred hcCCCcC-ccccCcceEEEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHH-HhcCCCCcceEeeeeec----CCee
Q 036011 682 TDGFNEC-NLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVL-RNVRHRNLIKIFSSCCN----NDFR 754 (977)
Q Consensus 682 ~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~ 754 (977)
.++|.+. +.||+|+||.||+|+.. +++.||||++... ..+.+|++++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567776 78999999999999974 7899999998643 4567888888 55689999999999876 6678
Q ss_pred EEEEeccCCCCHHHHhhcCC-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC---CCceEEeecccc
Q 036011 755 ALVLELMPNGSLEKWLYSDN-YFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE---DMVAHVSDFGLS 830 (977)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla 830 (977)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998754 36899999999999999999999 789999999999999998 789999999998
Q ss_pred cccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhh
Q 036011 831 KLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEV 910 (977)
Q Consensus 831 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (977)
.... +..++.++||||+||++|||++|+.||........ ....... +
T Consensus 168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~~~~~~~---~ 214 (299)
T 3m2w_A 168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------SPGMKTR---I 214 (299)
T ss_dssp EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------CCSCCS---S
T ss_pred cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------hHHHHHH---H
Confidence 6432 24578899999999999999999999965322110 0000000 0
Q ss_pred cchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 036011 911 VDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAAVK 956 (977)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~~~ 956 (977)
..... .........+...+.+++.+||+.||.+|||+.|++++
T Consensus 215 ~~~~~---~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 215 RMGQY---EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CTTCC---SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccc---cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000 00111112345568899999999999999999999874
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.6e-32 Score=304.66 Aligned_cols=288 Identities=27% Similarity=0.339 Sum_probs=206.2
Q ss_pred CceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCC
Q 036011 246 NLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRN 325 (977)
Q Consensus 246 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~ 325 (977)
+++.+++++|.++ .+|..+. ++|++|+|++|+++++.|..|.++++|++|++++|.++.+.+.. +..+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~l~~ 103 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKA-------FSPLRK 103 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG-------STTCTT
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhH-------hhCcCC
Confidence 4555555555555 4444442 35556666666655555555555666666666666555543322 555566
Q ss_pred CceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEee
Q 036011 326 LTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLY 405 (977)
Q Consensus 326 L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 405 (977)
|++|++++|.+... |..+. ++|++|++++|.+++..+..|..+++|++|+++
T Consensus 104 L~~L~L~~n~l~~l--------------------------~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 155 (332)
T 2ft3_A 104 LQKLYISKNHLVEI--------------------------PPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMG 155 (332)
T ss_dssp CCEEECCSSCCCSC--------------------------CSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECC
T ss_pred CCEEECCCCcCCcc--------------------------Ccccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECC
Confidence 66666666655421 11121 567777777777776666677778888888888
Q ss_pred ccccc--CccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCC
Q 036011 406 GNNLE--GSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSG 483 (977)
Q Consensus 406 ~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 483 (977)
+|.++ +..+..+..+ +|+.|++++|++++ +|..+. ++|++|++++|++++..+..|..+++|+.|++++|++++
T Consensus 156 ~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 156 GNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp SCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred CCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 88875 3566677777 88888888888884 555443 688899999999988888888889999999999999988
Q ss_pred CCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCc------cccCeeeccCCccC--C
Q 036011 484 SLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSL------TGLESLDLSNNNLS--G 555 (977)
Q Consensus 484 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~--~ 555 (977)
..+..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|... .+|+.|++++|++. +
T Consensus 232 ~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~ 310 (332)
T 2ft3_A 232 IENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWE 310 (332)
T ss_dssp CCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGG
T ss_pred CChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccc
Confidence 77778888999999999999998 788888999999999999999997777777653 67899999999987 5
Q ss_pred CCCcccccccccCccccCCCc
Q 036011 556 EIPKSLEALLFLKQLNVSHNK 576 (977)
Q Consensus 556 ~~p~~~~~l~~L~~L~l~~N~ 576 (977)
..|..|..++.|+.+++++|+
T Consensus 311 ~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 311 VQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCGGGGTTBCCSTTEEC----
T ss_pred cCcccccccchhhhhhccccc
Confidence 678888999999999999885
No 293
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.5e-34 Score=326.11 Aligned_cols=240 Identities=18% Similarity=0.158 Sum_probs=180.5
Q ss_pred hcCCCcCccccCcceEEEEEEEe-CCCCEEEEEEeeccch---hhHHHHHHHHHHHHhcCC-CCcceEe-----------
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTF-SDGTSFAIKVFNLQLD---RAFRSFDSECEVLRNVRH-RNLIKIF----------- 745 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv~l~----------- 745 (977)
...|...++||+|+||+||+|++ .+|+.||||++..... ...+.+.+|+.+++.++| ++.....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34577788999999999999995 4799999999874432 335779999999999987 3221111
Q ss_pred ----------eeeec-----CCeeEEEEeccCCCCHHHHhh------cCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 036011 746 ----------SSCCN-----NDFRALVLELMPNGSLEKWLY------SDNYFLDLLERLNIMIGVALALEYLHHGHSTPV 804 (977)
Q Consensus 746 ----------~~~~~-----~~~~~lv~e~~~~gsL~~~l~------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i 804 (977)
.++.. ....+++|+++ +++|.+++. .....+++..+..++.||++||+||| +.+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 11111 12356777766 689999884 22445788899999999999999999 7899
Q ss_pred EeCCCCCCceeeCCCCceEEeecccccccCCCCCcceeeccccCCcccCcccc----------CCCCcCcccchhhHhHH
Q 036011 805 VHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYG----------TEGIVSSKCDVYSYGVL 874 (977)
Q Consensus 805 vH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwslG~i 874 (977)
+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||+
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 99999999999999999999999999865432 333467 999999998 66679999999999999
Q ss_pred HHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 036011 875 LTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVLHLALDCCMESPDQRIYMTDAA 954 (977)
Q Consensus 875 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev~ 954 (977)
+|||++|+.||......+. ...+ +.... .++..+.+++.+||+.||++||++.|++
T Consensus 307 l~elltg~~Pf~~~~~~~~-------------~~~~----~~~~~-------~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALGG-------------SEWI----FRSCK-------NIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHHSSCCCCTTGGGSC-------------SGGG----GSSCC-------CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHHCCCCCCCcchhhh-------------HHHH----Hhhcc-------cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999999999976432111 0011 11011 1234578999999999999999987775
Q ss_pred H
Q 036011 955 V 955 (977)
Q Consensus 955 ~ 955 (977)
+
T Consensus 363 ~ 363 (413)
T 3dzo_A 363 E 363 (413)
T ss_dssp T
T ss_pred h
Confidence 4
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.2e-32 Score=301.02 Aligned_cols=289 Identities=25% Similarity=0.308 Sum_probs=189.8
Q ss_pred CceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCC
Q 036011 246 NLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRN 325 (977)
Q Consensus 246 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~ 325 (977)
+++.++++++.++ .+|..+. ++|++|+|++|+++++.+..|.++++|++|++++|.++.+.+.. +..+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~l~~ 101 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA-------FAPLVK 101 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTT-------TTTCTT
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHH-------hcCCCC
Confidence 4455555555555 3444332 35556666666665555555566666666666666655554332 555566
Q ss_pred CceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEee
Q 036011 326 LTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLY 405 (977)
Q Consensus 326 L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 405 (977)
|++|++++|.++. +| ..+. ++|++|++++|.+++..+..|.++++|++|+++
T Consensus 102 L~~L~Ls~n~l~~-l~-------------------------~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 102 LERLYLSKNQLKE-LP-------------------------EKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CCEEECCSSCCSB-CC-------------------------SSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CCEEECCCCcCCc-cC-------------------------hhhc--ccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 6666666665542 11 1111 456666666666665555666667777777777
Q ss_pred cccccC--ccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCC
Q 036011 406 GNNLEG--SIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSG 483 (977)
Q Consensus 406 ~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 483 (977)
+|.++. ..+..+..+++|+.|++++|+++. +|..+. ++|++|++++|++++..|..|..+++|+.|++++|++++
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 776642 455666677777777777777763 444433 677888888888877777777778888888888888877
Q ss_pred CCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCc------cccCeeeccCCccCC--
Q 036011 484 SLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSL------TGLESLDLSNNNLSG-- 555 (977)
Q Consensus 484 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~~-- 555 (977)
..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|... ..|+.|+|++|++..
T Consensus 231 ~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~ 309 (330)
T 1xku_A 231 VDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWE 309 (330)
T ss_dssp ECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGG
T ss_pred eChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccc
Confidence 66667788888888888888887 677778888888888888888887666666543 678888888888863
Q ss_pred CCCcccccccccCccccCCCc
Q 036011 556 EIPKSLEALLFLKQLNVSHNK 576 (977)
Q Consensus 556 ~~p~~~~~l~~L~~L~l~~N~ 576 (977)
..|..|..+..++.++|++|+
T Consensus 310 i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 310 IQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCGGGGTTCCCGGGEEC----
T ss_pred cCccccccccceeEEEecccC
Confidence 556778888888888888885
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.2e-34 Score=317.19 Aligned_cols=243 Identities=19% Similarity=0.236 Sum_probs=184.4
Q ss_pred hcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--------hhhHHHHHHHHHHHHhcC---------CCCcceE
Q 036011 682 TDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--------DRAFRSFDSECEVLRNVR---------HRNLIKI 744 (977)
Q Consensus 682 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~l 744 (977)
.++|++.+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999998 68999999998653 223467889999999886 6666665
Q ss_pred eee-----------------eec-------------CCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHH
Q 036011 745 FSS-----------------CCN-------------NDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALE 794 (977)
Q Consensus 745 ~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~ 794 (977)
.++ +.+ .+..++||||+++|++.+.+.. ..+++..+..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 333 6789999999999977666644 34899999999999999999
Q ss_pred HHHhcCCCCeEeCCCCCCceeeCCCC--------------------ceEEeecccccccCCCCCcceeeccccCCcccCc
Q 036011 795 YLHHGHSTPVVHCDLKPSNILLDEDM--------------------VAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAP 854 (977)
Q Consensus 795 ~LH~~~~~~ivH~dlk~~NIll~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aP 854 (977)
|||+ +.+|+||||||+|||++.++ .+||+|||+|+..... ..+||+.|+||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccCh
Confidence 9993 36899999999999999887 9999999999876532 23699999999
Q ss_pred cccCCCCcCcccchhhHhHH-HHHHhcCCCCCCcCCcccccHHHHHHhhCCCchhhhcchhhhccccCchHHHHHHHHHH
Q 036011 855 EYGTEGIVSSKCDVYSYGVL-LTETFTRKKPTDDMFTGEMSLKKWVKESLPHGLMEVVDTNLLRQEHTSSAEMDCLLSVL 933 (977)
Q Consensus 855 E~~~~~~~~~~~DvwslG~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 933 (977)
|++.+.. +.++||||+|++ .+++++|..||... .|..... ..+.................+...+.
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLT----DKMLKQMTFKTKCNTPAMKQIKRKIQ 313 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHH----HHHHHTCCCSSCCCSHHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHH----HhhhhhhccCcccchhhhhhcCHHHH
Confidence 9998776 899999998777 77889999987431 1211100 00000000011112233456778899
Q ss_pred HHHHHhhcCCCCCCCCHHHHH
Q 036011 934 HLALDCCMESPDQRIYMTDAA 954 (977)
Q Consensus 934 ~l~~~cl~~~P~~RPs~~ev~ 954 (977)
+++.+|++.| |++|++
T Consensus 314 dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHhccC-----CHHHHH
Confidence 9999999976 998887
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=1.4e-31 Score=296.86 Aligned_cols=290 Identities=24% Similarity=0.295 Sum_probs=143.7
Q ss_pred cccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceecc
Q 036011 75 FLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSM 154 (977)
Q Consensus 75 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 154 (977)
+++.++++++.++. +|..+. ++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLKA-VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCccc-cCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 45566666655554 444442 455555555555554444455555555555555555554444444444444444444
Q ss_pred ccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccc
Q 036011 155 FNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHL 234 (977)
Q Consensus 155 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 234 (977)
+|.++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|+++. .
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~------------------------~- 162 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN------------------------S- 162 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG------------------------G-
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc------------------------C-
Confidence 44444 3333322 344444444444443323334444444444444444321 0
Q ss_pred cCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchh
Q 036011 235 DLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEW 314 (977)
Q Consensus 235 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 314 (977)
.+.+..+..+ +|++|++++|++++ +|..+. ++|++|++++|++++..+..|..+++|+.|++++|+++.+++
T Consensus 163 ~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~---- 234 (332)
T 2ft3_A 163 GFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIEN---- 234 (332)
T ss_dssp GSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCT----
T ss_pred CCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCCh----
Confidence 1112222222 44444444444442 333332 345555555555554444445555555555555544444332
Q ss_pred hhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhh
Q 036011 315 SFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVG 394 (977)
Q Consensus 315 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 394 (977)
..+..+++|++|++++|+++ .+|..+.
T Consensus 235 ----------------------------------------------------~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 235 ----------------------------------------------------GSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp ----------------------------------------------------TGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred ----------------------------------------------------hHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 22344455555555555555 4555566
Q ss_pred ccCCCCEEEeecccccCcccccccc------ccccceeeecCCccC--CCchhhhcCCCCCCeeecCCCc
Q 036011 395 RLEQLQGLSLYGNNLEGSIPYDLCH------LERLNGIRLNGNKLS--GPIPQCLASLISLRELNLGSNK 456 (977)
Q Consensus 395 ~l~~L~~L~L~~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~ 456 (977)
.+++|++|++++|+|++..+..|.. ...|+.|++++|.+. +..|..|..+++|+.|++++|+
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 6666666666666666554444443 255777777777776 5666777777788888887774
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=2.5e-31 Score=294.78 Aligned_cols=247 Identities=24% Similarity=0.322 Sum_probs=172.1
Q ss_pred EEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccC
Q 036011 52 VRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRN 131 (977)
Q Consensus 52 v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 131 (977)
++.+++++++++ .+|..+. +.|++|+|++|++++..+..|.++++|++|+|++|++++..|..++.+++|++|+|++
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 345777777877 6777654 6889999999999987777899999999999999999977788899999999999999
Q ss_pred cCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccc--cCCccccCCCCCceEEeeccCCCCC
Q 036011 132 NSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQG--EIPSEIGNLQNLEILVLGMNNLSGP 209 (977)
Q Consensus 132 n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~--~~p~~l~~l~~L~~L~l~~N~l~~~ 209 (977)
|.++ .+|..+. ++|++|++++|.+.+..+..|+++++|++|++++|.++. ..+..+.++++|++|++++|+++.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~- 185 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT- 185 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-
Confidence 9988 5565554 566777777776665555566666666666666666642 445556666666666666666552
Q ss_pred CchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeeccccccccccccc
Q 036011 210 IQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTF 289 (977)
Q Consensus 210 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 289 (977)
+|...+ ++|++|++++|++++..|..+..+++|++|+|++|++++..+..|
T Consensus 186 --------------------------l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 236 (330)
T 1xku_A 186 --------------------------IPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSL 236 (330)
T ss_dssp --------------------------CCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTG
T ss_pred --------------------------CCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhc
Confidence 232222 566677777777766666667777777777777777776666667
Q ss_pred ccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCc
Q 036011 290 GNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPP 342 (977)
Q Consensus 290 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 342 (977)
..+++|+.|++++|+++.++.. +..+++|++|++++|++++..+.
T Consensus 237 ~~l~~L~~L~L~~N~l~~lp~~--------l~~l~~L~~L~l~~N~i~~~~~~ 281 (330)
T 1xku_A 237 ANTPHLRELHLNNNKLVKVPGG--------LADHKYIQVVYLHNNNISAIGSN 281 (330)
T ss_dssp GGSTTCCEEECCSSCCSSCCTT--------TTTCSSCCEEECCSSCCCCCCTT
T ss_pred cCCCCCCEEECCCCcCccCChh--------hccCCCcCEEECCCCcCCccChh
Confidence 7777777777777776654432 55566666666666666654433
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=3.2e-35 Score=342.50 Aligned_cols=383 Identities=21% Similarity=0.164 Sum_probs=240.1
Q ss_pred cccceeccccccccccCcc-ccCccccceeeeecccccc----cCCccccCCCCCceEEeeccCCCCCCchhhcccccee
Q 036011 147 RLEKWDSMFNIIDGNIPSR-IGNLSSLVNVNLAYNNLQG----EIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTIT 221 (977)
Q Consensus 147 ~L~~L~l~~n~i~~~~p~~-~~~l~~L~~L~L~~n~i~~----~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~ 221 (977)
+|++|++++|.++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|++....+..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~------ 77 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVL------ 77 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHH------
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHH------
Confidence 4555555555554332222 4445555555555555542 1233444445555555555554432222222
Q ss_pred EEEccCCcccccccCCCccccCCC----CceEEEecCceeee----cCCcccccccccceEeeccccccccccccccc--
Q 036011 222 LINLFGNQLSGHLDLPPKVSYSLP----NLRVFSLGKNKLTG----TIPNSITNASKLTGLDLSFNSFSGLIPHTFGN-- 291 (977)
Q Consensus 222 ~L~L~~N~l~~~~~~~~~~~~~l~----~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-- 291 (977)
..++ +|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+..
T Consensus 78 --------------------~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l 137 (461)
T 1z7x_W 78 --------------------QGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGL 137 (461)
T ss_dssp --------------------HTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHH
T ss_pred --------------------HHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHH
Confidence 1222 57777777777663 44666777777888888888776544443332
Q ss_pred ---ccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCcc
Q 036011 292 ---LRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHE 368 (977)
Q Consensus 292 ---l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~ 368 (977)
.++|++|++++|.++..... .+...+..+++|++|++++|.+.+..+..+. ..
T Consensus 138 ~~~~~~L~~L~L~~n~l~~~~~~---~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~---------------------~~ 193 (461)
T 1z7x_W 138 LDPQCRLEKLQLEYCSLSAASCE---PLASVLRAKPDFKELTVSNNDINEAGVRVLC---------------------QG 193 (461)
T ss_dssp TSTTCCCCEEECTTSCCBGGGHH---HHHHHHHHCTTCCEEECCSSBCHHHHHHHHH---------------------HH
T ss_pred hcCCCcceEEECCCCCCCHHHHH---HHHHHHhhCCCCCEEECcCCCcchHHHHHHH---------------------HH
Confidence 45677777877777653321 1233456677888888888776532221111 11
Q ss_pred c-cccccccEEEeecCccCCC----CChhhhccCCCCEEEeecccccCcc-----ccccccccccceeeecCCccCCC--
Q 036011 369 I-GNLRSLIVLSLFINALNGT----IPSTVGRLEQLQGLSLYGNNLEGSI-----PYDLCHLERLNGIRLNGNKLSGP-- 436 (977)
Q Consensus 369 ~-~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~-- 436 (977)
+ ...++|++|++++|.+++. ++..+..+++|++|++++|.+++.. +..+..+++|+.|++++|++++.
T Consensus 194 l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~ 273 (461)
T 1z7x_W 194 LKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGC 273 (461)
T ss_dssp HHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHH
T ss_pred HhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHH
Confidence 1 1245777888888877753 4667777888888888888877532 22233578888888888888753
Q ss_pred --chhhhcCCCCCCeeecCCCcCCCCCCccccCc-----ccCceEEccCCCCCCC----CccccccccccCeeeCcCCcC
Q 036011 437 --IPQCLASLISLRELNLGSNKFSSSIPSSFWSL-----EYLLAVNLSSNSLSGS----LPSNIQNLQVLINLDLSRNQL 505 (977)
Q Consensus 437 --~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l 505 (977)
++..+..+++|++|++++|.+.+..+..+... ++|+.|++++|.+++. ++..+..+++|++|+|++|++
T Consensus 274 ~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i 353 (461)
T 1z7x_W 274 GDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRL 353 (461)
T ss_dssp HHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBC
T ss_pred HHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcc
Confidence 56777778888888888888875444444332 5888888888888754 456667778888888888888
Q ss_pred CCCcchhhhc-----ccccceeccCCccccc----cccccccCccccCeeeccCCccCCCCCcccc-----cccccCccc
Q 036011 506 SGDIPITIGS-----LKDLVTLSLASNQFEG----PIPQTFGSLTGLESLDLSNNNLSGEIPKSLE-----ALLFLKQLN 571 (977)
Q Consensus 506 ~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~ 571 (977)
++..+..+.. .++|+.|+|++|++++ .+|..+..+++|++|||++|++++.-...+. ....|+.|+
T Consensus 354 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~ 433 (461)
T 1z7x_W 354 EDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLV 433 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEE
T ss_pred ccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhhee
Confidence 7655555554 5688888888888886 6788888888888888888888753222221 123466666
Q ss_pred cCCCcccc
Q 036011 572 VSHNKLEG 579 (977)
Q Consensus 572 l~~N~l~~ 579 (977)
+.+|.+..
T Consensus 434 ~~~~~~~~ 441 (461)
T 1z7x_W 434 LYDIYWSE 441 (461)
T ss_dssp CTTCCCCH
T ss_pred ecccccCH
Confidence 66665543
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.4e-35 Score=345.61 Aligned_cols=398 Identities=21% Similarity=0.187 Sum_probs=198.9
Q ss_pred ccccEeeccCCcccccCCCC-cCCCCCCCEEeCcCccCCC----CCCccccccccCcEEeccCcCCCCCCCCcccCcCcc
Q 036011 74 SFLMSLDISKNNFHAYLPNE-LGQLRRLRFISLDYNEFSG----SFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRL 148 (977)
Q Consensus 74 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 148 (977)
+.|++|||++|+++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+++..+..+
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l------ 76 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCV------ 76 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHH------
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHH------
Confidence 34566666666655422222 4455555555555555552 234444445555555555555442211111
Q ss_pred cceeccccccccccCccccCcc----ccceeeeecccccc----cCCccccCCCCCceEEeeccCCCCCCchhhccccce
Q 036011 149 EKWDSMFNIIDGNIPSRIGNLS----SLVNVNLAYNNLQG----EIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTI 220 (977)
Q Consensus 149 ~~L~l~~n~i~~~~p~~~~~l~----~L~~L~L~~n~i~~----~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L 220 (977)
+..++ +|++|+|++|+++. .++..+..+++|++|++++|++++..+..+..
T Consensus 77 -----------------~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~---- 135 (461)
T 1z7x_W 77 -----------------LQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE---- 135 (461)
T ss_dssp -----------------HHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH----
T ss_pred -----------------HHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH----
Confidence 11222 46666666666653 34556666666666666666655332222221
Q ss_pred eEEEccCCcccccccCCCccccCCCCceEEEecCceeeec----CCcccccccccceEeeccccccccccccccc-----
Q 036011 221 TLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGT----IPNSITNASKLTGLDLSFNSFSGLIPHTFGN----- 291 (977)
Q Consensus 221 ~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~----- 291 (977)
......++|++|+|++|++++. ++..+..+++|++|+|++|.++...+..+..
T Consensus 136 ------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 197 (461)
T 1z7x_W 136 ------------------GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDS 197 (461)
T ss_dssp ------------------HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHS
T ss_pred ------------------HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcC
Confidence 1111234566666666666542 2444556677777777777776554444432
Q ss_pred ccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccc
Q 036011 292 LRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGN 371 (977)
Q Consensus 292 l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~ 371 (977)
.++|++|++++|.++..... .+...+..+++|++|++++|.+.+.....+ .+..+..
T Consensus 198 ~~~L~~L~L~~n~l~~~~~~---~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l--------------------~~~~~~~ 254 (461)
T 1z7x_W 198 PCQLEALKLESCGVTSDNCR---DLCGIVASKASLRELALGSNKLGDVGMAEL--------------------CPGLLHP 254 (461)
T ss_dssp CCCCCEEECTTSCCBTTHHH---HHHHHHHHCTTCCEEECCSSBCHHHHHHHH--------------------HHHHTST
T ss_pred CCCceEEEccCCCCcHHHHH---HHHHHHHhCCCccEEeccCCcCChHHHHHH--------------------HHHHhcC
Confidence 34666777777666543211 122234555666666666665442100000 0111123
Q ss_pred cccccEEEeecCccCCC----CChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhc-CCCC
Q 036011 372 LRSLIVLSLFINALNGT----IPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLA-SLIS 446 (977)
Q Consensus 372 l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~ 446 (977)
+++|++|++++|.++.. ++..+..+++|++|+|++|.+++..+..+... +. ..++
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~--------------------l~~~~~~ 314 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET--------------------LLEPGCQ 314 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH--------------------HTSTTCC
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHH--------------------hccCCcc
Confidence 45566666666655532 34445555555555555555543333222221 10 1134
Q ss_pred CCeeecCCCcCCCC----CCccccCcccCceEEccCCCCCCCCcccccc-----ccccCeeeCcCCcCCC----Ccchhh
Q 036011 447 LRELNLGSNKFSSS----IPSSFWSLEYLLAVNLSSNSLSGSLPSNIQN-----LQVLINLDLSRNQLSG----DIPITI 513 (977)
Q Consensus 447 L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~ 513 (977)
|++|++++|.+++. ++..+..+++|+.|++++|.+++..+..+.. .++|++|+|++|++++ .+|..+
T Consensus 315 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l 394 (461)
T 1z7x_W 315 LESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHH
T ss_pred ceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHH
Confidence 55555555554433 2333444455555555555554333333322 4567777777777764 566667
Q ss_pred hcccccceeccCCcccccccccccc-----CccccCeeeccCCccCCCCCc
Q 036011 514 GSLKDLVTLSLASNQFEGPIPQTFG-----SLTGLESLDLSNNNLSGEIPK 559 (977)
Q Consensus 514 ~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~~p~ 559 (977)
..+++|++|+|++|++++.....+. ...+|+.|++.+|.+....+.
T Consensus 395 ~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~ 445 (461)
T 1z7x_W 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMED 445 (461)
T ss_dssp HHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHH
T ss_pred HhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHH
Confidence 7777777777777777643222211 123566666666666543333
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=297.81 Aligned_cols=288 Identities=18% Similarity=0.153 Sum_probs=222.1
Q ss_pred CCCCCCCCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCcc
Q 036011 30 NWSISQPICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNE 109 (977)
Q Consensus 30 ~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 109 (977)
.|....++|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 22 ~~~~~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 46566788999987 64 4566777 6777654 478888898888888666688888889999998888
Q ss_pred CCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccC-ccccCccccceeeeecc-cccccCC
Q 036011 110 FSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIP-SRIGNLSSLVNVNLAYN-NLQGEIP 187 (977)
Q Consensus 110 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p-~~~~~l~~L~~L~L~~n-~i~~~~p 187 (977)
+++..|..|+.+++|++|+|++|++++..+..+.++++|++|++++|.+++..+ ..++++++|++|++++| .++...+
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 887677788888888999998888886544558888888888888888884333 47888888999999888 4665566
Q ss_pred ccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccc-
Q 036011 188 SEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSIT- 266 (977)
Q Consensus 188 ~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~- 266 (977)
..|+++++|++|++++|++++..+..+..+++|+.|++++|+++ .++...+..+++|++|++++|++++..+..+.
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~---~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 244 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI---LLLEIFVDVTSSVECLELRDTDLDTFHFSELST 244 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST---THHHHHHHHTTTEEEEEEESCBCTTCCCC----
T ss_pred HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc---cchhhhhhhcccccEEECCCCcccccccccccc
Confidence 78888888899999988888887888888888888888888886 44555555678899999999988865444332
Q ss_pred --cccccceEeeccccccc----ccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCC
Q 036011 267 --NASKLTGLDLSFNSFSG----LIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGIL 340 (977)
Q Consensus 267 --~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 340 (977)
....++.++|++|.+++ .+|..+..+++|+.|++++|+++.++... +..+++|++|++++|++.+..
T Consensus 245 ~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~-------~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 245 GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGI-------FDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp --CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTT-------TTTCTTCCEEECCSSCBCCCH
T ss_pred ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHH-------HhcCCCCCEEEeeCCCccCcC
Confidence 35567778888877765 35677888999999999999998776543 578899999999999888654
Q ss_pred C
Q 036011 341 P 341 (977)
Q Consensus 341 p 341 (977)
|
T Consensus 318 ~ 318 (353)
T 2z80_A 318 P 318 (353)
T ss_dssp H
T ss_pred C
Confidence 4
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=2.9e-33 Score=336.89 Aligned_cols=456 Identities=15% Similarity=0.111 Sum_probs=228.7
Q ss_pred CCCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcc---cccCCCCcC------------CCCC
Q 036011 35 QPICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNF---HAYLPNELG------------QLRR 99 (977)
Q Consensus 35 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~ 99 (977)
.-|++|.++.+... ..+.+.++ +....+..+..+++|++|+|+++.. .+.+|..++ .+++
T Consensus 39 ~vck~W~~~~~~~~----~~l~~~~~-~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 113 (592)
T 3ogk_B 39 LVCRRWFKIDSETR----EHVTMALC-YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQ 113 (592)
T ss_dssp TSCHHHHHHHHHHC----CEEEESCG-GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTT
T ss_pred HHhHHHHHhhhccc----cEEEEeec-cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCC
Confidence 33558999864321 22333332 3323344566788899999987543 133454444 5667
Q ss_pred CCEEeCcCccCCCCCCcccccc--ccCcEEeccCcC-CCC-CCCCcccCcCcccceeccccccccc----cCccccCccc
Q 036011 100 LRFISLDYNEFSGSFPSWIGVL--SKLQILSLRNNS-FTG-PIPNSLFNLSRLEKWDSMFNIIDGN----IPSRIGNLSS 171 (977)
Q Consensus 100 L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~n~-l~~-~~p~~l~~l~~L~~L~l~~n~i~~~----~p~~~~~l~~ 171 (977)
|++|+|++|.+++..+..++.. .+|++|+|++|. ++. .++....++++|++|+|++|.+.+. ++..+..+++
T Consensus 114 L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~ 193 (592)
T 3ogk_B 114 LKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTS 193 (592)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCC
T ss_pred CCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCC
Confidence 7777777776665555555553 337777777665 110 0111112445555555555554433 2223334445
Q ss_pred cceeeeecccccc----cCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCc
Q 036011 172 LVNVNLAYNNLQG----EIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNL 247 (977)
Q Consensus 172 L~~L~L~~n~i~~----~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 247 (977)
|++|++++|.+++ .++..+.++++|+.|++++|.+.+ ++..+. .+++|
T Consensus 194 L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~---------------------------~~~~L 245 (592)
T 3ogk_B 194 LEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK---------------------------AAANL 245 (592)
T ss_dssp CCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH---------------------------HCTTC
T ss_pred ccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh---------------------------hhhHH
Confidence 5555555555441 222223344445555555444442 333344 44555
Q ss_pred eEEEecCceee---ecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCC
Q 036011 248 RVFSLGKNKLT---GTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCR 324 (977)
Q Consensus 248 ~~L~L~~N~l~---~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~ 324 (977)
++|+++..... ...+..+..+++|+.|+++++... .+|..+..+++|++|+|++|.++... ....+..++
T Consensus 246 ~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~------~~~~~~~~~ 318 (592)
T 3ogk_B 246 EEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETED------HCTLIQKCP 318 (592)
T ss_dssp CEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHH------HHHHHTTCT
T ss_pred HhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHH------HHHHHHhCc
Confidence 55555532221 123345666777788877775443 34566666777777777777643211 111245556
Q ss_pred CCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEee-----------cCccCCCC-Chh
Q 036011 325 NLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLF-----------INALNGTI-PST 392 (977)
Q Consensus 325 ~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~-----------~N~l~~~~-p~~ 392 (977)
+|++|+++ +.+.. +.++..+..+++|++|+++ .|.+++.. +..
T Consensus 319 ~L~~L~L~-~~~~~------------------------~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l 373 (592)
T 3ogk_B 319 NLEVLETR-NVIGD------------------------RGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIAL 373 (592)
T ss_dssp TCCEEEEE-GGGHH------------------------HHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHH
T ss_pred CCCEEecc-CccCH------------------------HHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHH
Confidence 66666665 22210 0111222344556666665 23443221 112
Q ss_pred hhccCCCCEEEeecccccCcccccccc-ccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCC-----CCcccc
Q 036011 393 VGRLEQLQGLSLYGNNLEGSIPYDLCH-LERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSS-----IPSSFW 466 (977)
Q Consensus 393 ~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----~~~~~~ 466 (977)
+..+++|++|+++.|++++..+..+.. +++|+.|+++.+. ..|++++. ++..+.
T Consensus 374 ~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~--------------------~~n~l~~~p~~~~~~~~~~ 433 (592)
T 3ogk_B 374 AQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLD--------------------REERITDLPLDNGVRSLLI 433 (592)
T ss_dssp HHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECS--------------------CCSCCSSCCCHHHHHHHHH
T ss_pred HhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecC--------------------CCccccCchHHHHHHHHHH
Confidence 333555555555555555443333333 4444444443000 13444432 112234
Q ss_pred CcccCceEEccCC--CCCCCCccccc-cccccCeeeCcCCcCCC-CcchhhhcccccceeccCCcccccc-ccccccCcc
Q 036011 467 SLEYLLAVNLSSN--SLSGSLPSNIQ-NLQVLINLDLSRNQLSG-DIPITIGSLKDLVTLSLASNQFEGP-IPQTFGSLT 541 (977)
Q Consensus 467 ~l~~L~~L~L~~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~ 541 (977)
++++|+.|++++| .+++..+..+. .+++|++|+|++|++++ .++..+..+++|+.|+|++|.+++. ++..+..++
T Consensus 434 ~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~ 513 (592)
T 3ogk_B 434 GCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLP 513 (592)
T ss_dssp HCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCS
T ss_pred hCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcC
Confidence 4555555555432 23332222232 25667777777777664 2344456677777777777776644 333345677
Q ss_pred ccCeeeccCCccCCCCCccc-ccccccCccccCCC
Q 036011 542 GLESLDLSNNNLSGEIPKSL-EALLFLKQLNVSHN 575 (977)
Q Consensus 542 ~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N 575 (977)
+|+.|+|++|++++.-...+ ..++.+....+..+
T Consensus 514 ~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 514 SLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp SCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred ccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 77777777777765433333 34565555555544
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.4e-30 Score=283.62 Aligned_cols=255 Identities=21% Similarity=0.281 Sum_probs=169.0
Q ss_pred CCCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCC--C
Q 036011 35 QPICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFS--G 112 (977)
Q Consensus 35 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~--~ 112 (977)
.+.|.|.+|.|.. ++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++ +
T Consensus 4 ~C~C~~~~l~c~~------------~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 4 RCSCSGTEIRCNS------------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp TCEEETTEEECCS------------SCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CCeeCCCEEEcCC------------CCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc
Confidence 3447888777753 3454 5666543 67888888888888755556788888888888888887 2
Q ss_pred CCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccC-ccccCccccceeeeecccccccCCcccc
Q 036011 113 SFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIP-SRIGNLSSLVNVNLAYNNLQGEIPSEIG 191 (977)
Q Consensus 113 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p-~~~~~l~~L~~L~L~~n~i~~~~p~~l~ 191 (977)
..|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|++++..+..+.
T Consensus 69 ~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 147 (306)
T 2z66_A 69 CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 147 (306)
T ss_dssp EEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTT
T ss_pred CcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcc
Confidence 33666777888888888888887 456667777777777777777775544 5677777777777777777766666777
Q ss_pred CCCCCceEEeeccCCCC-CCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccc
Q 036011 192 NLQNLEILVLGMNNLSG-PIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASK 270 (977)
Q Consensus 192 ~l~~L~~L~l~~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 270 (977)
++++|++|++++|++++ ..|..+..+++|+.|+|++|+++ .+++..+..+++|++|+|++|++++..+..+..+++
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE---QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC---EECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcC---CcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 77777777777777765 34555555556666666666555 233444455555666666666655444445555556
Q ss_pred cceEeeccccccccccccccccc-ccccccccccccCCC
Q 036011 271 LTGLDLSFNSFSGLIPHTFGNLR-FLSVLNLANNYLTTD 308 (977)
Q Consensus 271 L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~ 308 (977)
|++|+|++|++++..|..+..++ +|+.|+|++|.++..
T Consensus 225 L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 225 LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 66666666666555555555553 555555555555543
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=8e-30 Score=279.45 Aligned_cols=211 Identities=24% Similarity=0.255 Sum_probs=120.7
Q ss_pred ccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccc-cccccccccceeeecCCccCCCchhhhcCCCCCCe
Q 036011 371 NLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIP-YDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRE 449 (977)
Q Consensus 371 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 449 (977)
.+++|++|++++|.+. .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|++.+..+..+..+++|++
T Consensus 76 ~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 154 (306)
T 2z66_A 76 GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 154 (306)
T ss_dssp SCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCE
T ss_pred cccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCE
Confidence 3444455555555444 344445555556666666665554333 34555556666666666655555555666666666
Q ss_pred eecCCCcCCC-CCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcc
Q 036011 450 LNLGSNKFSS-SIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQ 528 (977)
Q Consensus 450 L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 528 (977)
|++++|++.+ ..|..|..+++|+.|++++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+
T Consensus 155 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred EECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 6666666654 355566666666666666666665555666666666666666666665555556666666666666666
Q ss_pred ccccccccccCcc-ccCeeeccCCccCCCCC--cccccccccCccccCCCcccccCC
Q 036011 529 FEGPIPQTFGSLT-GLESLDLSNNNLSGEIP--KSLEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 529 l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p 582 (977)
+++..|..+..++ +|+.|+|++|++++..+ .....+...+.+.+..+.+.+..|
T Consensus 235 l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 235 IMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp CCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred CcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 6666666666663 66666666666664321 112333444455555555555544
No 304
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=6.6e-29 Score=294.55 Aligned_cols=290 Identities=26% Similarity=0.320 Sum_probs=194.1
Q ss_pred CCCCCCCCCCcccceEe------cCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCE
Q 036011 29 NNWSISQPICKWVGISC------GARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRF 102 (977)
Q Consensus 29 ~~w~~~~~~c~w~gv~c------~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 102 (977)
+.|..+.+||.|.|..| .+....++.|++++++++ .+|..+. ++|++|+|++|+|+. +|. .+++|++
T Consensus 13 ~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~ 85 (622)
T 3g06_A 13 SAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRT 85 (622)
T ss_dssp HHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCE
T ss_pred HHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCE
Confidence 46877788999977432 222335788999999998 8888776 789999999999886 565 5788889
Q ss_pred EeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccc
Q 036011 103 ISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNL 182 (977)
Q Consensus 103 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i 182 (977)
|+|++|+++ .+|. .+++|++|+|++|.+++ +|. .+++|++|++++|.|++ +|.. +++|++|+|++|++
T Consensus 86 L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l 153 (622)
T 3g06_A 86 LEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQL 153 (622)
T ss_dssp EEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred EEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcC
Confidence 999998888 6776 67888888888888884 444 45566666666666663 4442 35566666666666
Q ss_pred cccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCC
Q 036011 183 QGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIP 262 (977)
Q Consensus 183 ~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 262 (977)
++ +|. .+++|+.|++++|++++ +| ..+++|+.|+|++|++++ +|
T Consensus 154 ~~-l~~---~~~~L~~L~L~~N~l~~---------------------------l~----~~~~~L~~L~Ls~N~l~~-l~ 197 (622)
T 3g06_A 154 AS-LPA---LPSELCKLWAYNNQLTS---------------------------LP----MLPSGLQELSVSDNQLAS-LP 197 (622)
T ss_dssp SC-CCC---CCTTCCEEECCSSCCSC---------------------------CC----CCCTTCCEEECCSSCCSC-CC
T ss_pred CC-cCC---ccCCCCEEECCCCCCCC---------------------------Cc----ccCCCCcEEECCCCCCCC-CC
Confidence 63 332 23455556666665553 22 123556666666666653 33
Q ss_pred cccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCc
Q 036011 263 NSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPP 342 (977)
Q Consensus 263 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 342 (977)
.. +++|+.|++++|.++.+ |. .+++|+.|+|++|.|+.++ ..+++|+.|++++|.+++
T Consensus 198 ~~---~~~L~~L~L~~N~l~~l-~~---~~~~L~~L~Ls~N~L~~lp-----------~~l~~L~~L~Ls~N~L~~---- 255 (622)
T 3g06_A 198 TL---PSELYKLWAYNNRLTSL-PA---LPSGLKELIVSGNRLTSLP-----------VLPSELKELMVSGNRLTS---- 255 (622)
T ss_dssp CC---CTTCCEEECCSSCCSSC-CC---CCTTCCEEECCSSCCSCCC-----------CCCTTCCEEECCSSCCSC----
T ss_pred Cc---cchhhEEECcCCccccc-CC---CCCCCCEEEccCCccCcCC-----------CCCCcCcEEECCCCCCCc----
Confidence 32 24566666666666643 32 2356666666666666543 123566666666666552
Q ss_pred ccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCcccccccccc
Q 036011 343 VIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLE 421 (977)
Q Consensus 343 ~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 421 (977)
+|. .+++|+.|+|++|.|+ .+|..+..+++|+.|+|++|.+++..|..+..++
T Consensus 256 ----------------------lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 256 ----------------------LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ----------------------CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ----------------------CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 222 3467888888888888 6788888999999999999999888887776655
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.6e-28 Score=282.73 Aligned_cols=246 Identities=22% Similarity=0.256 Sum_probs=164.2
Q ss_pred EEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCc
Q 036011 53 RALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNN 132 (977)
Q Consensus 53 ~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 132 (977)
..++.++.+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 34667777887 6887664 68899999999999888888999999999999999998777788899999999999999
Q ss_pred CCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeec-ccccccCCccccCCCCCceEEeeccCCCCCCc
Q 036011 133 SFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAY-NNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQ 211 (977)
Q Consensus 133 ~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~-n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~ 211 (977)
++++..+..|.++++|++|+|++|.|+...+..|.++++|++|+|++ |.+....+..|.++++|++|+|++|++++. |
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c
Confidence 99876667788888888888888888866666788888888888887 444433334577788888888888877743 2
Q ss_pred hhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeeccccccccccccccc
Q 036011 212 PSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGN 291 (977)
Q Consensus 212 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 291 (977)
.+..+++|+.|+|++|+++ .+++..+..+++|++|+|++|++++..+..|..+++|++|+|++|+|+++.+..|..
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFP---EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCS---EECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred -cccccccccEEECcCCcCc---ccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 3444444555555555444 223334444444444444444444444444444444444444444444444444444
Q ss_pred ccccccccccccccC
Q 036011 292 LRFLSVLNLANNYLT 306 (977)
Q Consensus 292 l~~L~~L~L~~N~l~ 306 (977)
+++|+.|+|++|.+.
T Consensus 289 l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 289 LRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred ccCCCEEEccCCCcC
Confidence 444444444444443
No 306
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=5e-31 Score=317.30 Aligned_cols=307 Identities=13% Similarity=0.055 Sum_probs=220.1
Q ss_pred CCCCceEEEecCceee----ecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhc
Q 036011 243 SLPNLRVFSLGKNKLT----GTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLS 318 (977)
Q Consensus 243 ~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 318 (977)
.+++|++|++++|+++ +.++..+.++++|++|+|++|.+.+ +|..+..+++|+.|+++++....... ....
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~----~~~~ 264 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMP----EKYM 264 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCT----TSSS
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchH----HHHH
Confidence 4566677777777665 2334445667788888888888776 45677778888888887533221111 1123
Q ss_pred ccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCC-hhhhccC
Q 036011 319 SLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIP-STVGRLE 397 (977)
Q Consensus 319 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 397 (977)
.+..+++|+.|+++++... .+|..+..+++|++|++++|.+++... ..+..++
T Consensus 265 ~l~~~~~L~~L~l~~~~~~--------------------------~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~ 318 (592)
T 3ogk_B 265 NLVFPRKLCRLGLSYMGPN--------------------------EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCP 318 (592)
T ss_dssp CCCCCTTCCEEEETTCCTT--------------------------TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCT
T ss_pred HhhccccccccCccccchh--------------------------HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCc
Confidence 4667778888887764322 344556677888888888888764433 3467888
Q ss_pred CCCEEEeecccccCccccccccccccceeeec-----------CCccCCC-chhhhcCCCCCCeeecCCCcCCCCCCccc
Q 036011 398 QLQGLSLYGNNLEGSIPYDLCHLERLNGIRLN-----------GNKLSGP-IPQCLASLISLRELNLGSNKFSSSIPSSF 465 (977)
Q Consensus 398 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~-----------~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 465 (977)
+|++|+++++-..+.++..+..+++|+.|+++ .|.+++. ++.....+++|++|+++.|++++..+..+
T Consensus 319 ~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l 398 (592)
T 3ogk_B 319 NLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESI 398 (592)
T ss_dssp TCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHH
T ss_pred CCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHH
Confidence 99999998333333344445678889999998 3666643 23335568899999999999987766666
Q ss_pred cC-cccCceEEcc----CCCCCCC-----CccccccccccCeeeCcCC--cCCCCcchhhhc-ccccceeccCCccccc-
Q 036011 466 WS-LEYLLAVNLS----SNSLSGS-----LPSNIQNLQVLINLDLSRN--QLSGDIPITIGS-LKDLVTLSLASNQFEG- 531 (977)
Q Consensus 466 ~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~- 531 (977)
.. +++|+.|+++ .|.+++. ++..+.++++|++|+|++| .+++..+..++. +++|+.|+|++|++++
T Consensus 399 ~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 478 (592)
T 3ogk_B 399 GTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE 478 (592)
T ss_dssp HHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH
T ss_pred HhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH
Confidence 65 8899999996 7788864 3444778999999999854 477666666655 8999999999999986
Q ss_pred cccccccCccccCeeeccCCccCCC-CCcccccccccCccccCCCccccc
Q 036011 532 PIPQTFGSLTGLESLDLSNNNLSGE-IPKSLEALLFLKQLNVSHNKLEGE 580 (977)
Q Consensus 532 ~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~ 580 (977)
.++..+..+++|+.|+|++|++++. ++..+..+++|++|++++|+++..
T Consensus 479 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 479 GLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 3556668899999999999998754 444557899999999999998764
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.3e-30 Score=286.29 Aligned_cols=250 Identities=20% Similarity=0.196 Sum_probs=122.5
Q ss_pred CcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCC-CCCCcccc-------ccccCcEEeccCcCCCCCCCCcc-
Q 036011 72 NFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFS-GSFPSWIG-------VLSKLQILSLRNNSFTGPIPNSL- 142 (977)
Q Consensus 72 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~p~~~~-------~l~~L~~L~L~~n~l~~~~p~~l- 142 (977)
..++|++|++++|.+ .+|..+... |++|+|++|+++ +.+|..+. .+++|++|+|++|++++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 334444444444444 234433332 444445544442 23444333 34455555555555554444443
Q ss_pred -cCcCcccceeccccccccccCccccCc-----cccceeeeecccccccCCccccCCCCCceEEeeccCCCCC--Cchhh
Q 036011 143 -FNLSRLEKWDSMFNIIDGNIPSRIGNL-----SSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGP--IQPSI 214 (977)
Q Consensus 143 -~~l~~L~~L~l~~n~i~~~~p~~~~~l-----~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~--~~~~l 214 (977)
..+++|++|++++|.+++. |..++.+ ++|++|+|++|++++..|..|+++++|++|++++|++.+. .+..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 4445555555555555443 4444444 4555555555555544445555555555555555554432 12222
Q ss_pred --ccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCC-cccccccccceEeeccccccccccccccc
Q 036011 215 --FNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIP-NSITNASKLTGLDLSFNSFSGLIPHTFGN 291 (977)
Q Consensus 215 --~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 291 (977)
..+++|+.|+|++|++++...++...+..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+.
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-
Confidence 445555555555555543222233333445555666666665554443 33444555666666666665 3344443
Q ss_pred ccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCC
Q 036011 292 LRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRG 338 (977)
Q Consensus 292 l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 338 (977)
++|++|+|++|+|++++. +..+++|++|++++|++++
T Consensus 274 -~~L~~L~Ls~N~l~~~p~---------~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRNPS---------PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -SEEEEEECCSSCCCSCCC---------TTTSCEEEEEECTTCTTTC
T ss_pred -CCceEEECCCCCCCCChh---------HhhCCCCCEEeccCCCCCC
Confidence 556666666666655421 4455666666666666553
No 308
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=275.34 Aligned_cols=208 Identities=19% Similarity=0.156 Sum_probs=122.4
Q ss_pred CCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccce
Q 036011 95 GQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVN 174 (977)
Q Consensus 95 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~ 174 (977)
..+......++++|.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|++++|.+++..|..|+++++|++
T Consensus 28 ~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp CEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 34455555677777776 6666544 36667777776666544445555555555555555555555555555555555
Q ss_pred eeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCC-ccccCCCCceEEEec
Q 036011 175 VNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPP-KVSYSLPNLRVFSLG 253 (977)
Q Consensus 175 L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~~~~l~~L~~L~L~ 253 (977)
|+|++|++++..+..|+++++|++|++++|+++ .++. ..+..+++|++|+++
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~---------------------------~l~~~~~~~~l~~L~~L~l~ 157 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK---------------------------TLGETSLFSHLTKLQILRVG 157 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS---------------------------SSCSSCSCTTCTTCCEEEEE
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCc---------------------------ccCchhhhccCCCCcEEECC
Confidence 555555555322233555555555555555554 2333 344556666666666
Q ss_pred Cc-eeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEec
Q 036011 254 KN-KLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVA 332 (977)
Q Consensus 254 ~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~ 332 (977)
+| .++...+..+..+++|++|++++|++++..|..|..+++|++|++++|.++.++.. .+..+++|+.|+++
T Consensus 158 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~-------~~~~~~~L~~L~L~ 230 (353)
T 2z80_A 158 NMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEI-------FVDVTSSVECLELR 230 (353)
T ss_dssp ESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHH-------HHHHTTTEEEEEEE
T ss_pred CCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhh-------hhhhcccccEEECC
Confidence 66 35555556666777777777777777766666777777777777777766543321 13345666666666
Q ss_pred CCCCCCC
Q 036011 333 SNPLRGI 339 (977)
Q Consensus 333 ~N~l~~~ 339 (977)
+|.+.+.
T Consensus 231 ~n~l~~~ 237 (353)
T 2z80_A 231 DTDLDTF 237 (353)
T ss_dssp SCBCTTC
T ss_pred CCccccc
Confidence 6666543
No 309
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.7e-28 Score=269.13 Aligned_cols=226 Identities=25% Similarity=0.309 Sum_probs=189.3
Q ss_pred CCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEE
Q 036011 323 CRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGL 402 (977)
Q Consensus 323 l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 402 (977)
.++++.|++++|.+. .+|..+..+++|++|+|++|.++ .+|..++.+++|++|
T Consensus 80 ~~~l~~L~L~~n~l~--------------------------~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L 132 (328)
T 4fcg_A 80 QPGRVALELRSVPLP--------------------------QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETL 132 (328)
T ss_dssp STTCCEEEEESSCCS--------------------------SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEE
T ss_pred ccceeEEEccCCCch--------------------------hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEE
Confidence 356677777777665 34556667778888888888887 777778888888888
Q ss_pred EeecccccCccccccccccccceeeecCCccCCCchhhhcC---------CCCCCeeecCCCcCCCCCCccccCcccCce
Q 036011 403 SLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLAS---------LISLRELNLGSNKFSSSIPSSFWSLEYLLA 473 (977)
Q Consensus 403 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 473 (977)
+|++|.++ .+|..+..+++|++|++++|++.+.+|..+.. +++|++|+|++|+++ .+|..+..+++|+.
T Consensus 133 ~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~ 210 (328)
T 4fcg_A 133 TLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKS 210 (328)
T ss_dssp EEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCE
T ss_pred ECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCE
Confidence 88888887 66777888888888888887777777776654 889999999999998 78888999999999
Q ss_pred EEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCcc
Q 036011 474 VNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNL 553 (977)
Q Consensus 474 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 553 (977)
|+|++|++++ +|..+..+++|++|+|++|++.+.+|..++.+++|+.|+|++|.+.+.+|..++++++|+.|+|++|++
T Consensus 211 L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 211 LKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp EEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred EEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 9999999985 666789999999999999999889999999999999999999999989999999999999999999999
Q ss_pred CCCCCcccccccccCccccCCCccc
Q 036011 554 SGEIPKSLEALLFLKQLNVSHNKLE 578 (977)
Q Consensus 554 ~~~~p~~~~~l~~L~~L~l~~N~l~ 578 (977)
.+.+|..+.++++|+.+++..|.+.
T Consensus 290 ~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 290 LSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999999877654
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.3e-28 Score=266.75 Aligned_cols=236 Identities=22% Similarity=0.232 Sum_probs=180.7
Q ss_pred ceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCcccccc
Q 036011 42 GISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVL 121 (977)
Q Consensus 42 gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 121 (977)
+.+|.... .+.+++++++++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..++.+
T Consensus 5 ~C~C~~~~--~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 79 (285)
T 1ozn_A 5 ACVCYNEP--KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGL 79 (285)
T ss_dssp TCEEECSS--SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CceECCCC--CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCc
Confidence 34564332 367888999998 677654 5789999999999999777889999999999999999997778899999
Q ss_pred ccCcEEeccCcC-CCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEE
Q 036011 122 SKLQILSLRNNS-FTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILV 200 (977)
Q Consensus 122 ~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~ 200 (977)
++|++|+|++|. +++..|..+.++++|++|++++|.+.+..|..|+++++|++|++++|++++..+..|+++++|++|+
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 999999999997 7766677788888888888877777776677777777777777777777755555577777777777
Q ss_pred eeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccc
Q 036011 201 LGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNS 280 (977)
Q Consensus 201 l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 280 (977)
+++|++++ +++..+..+++|++|++++|++++..|..+..+++|++|+|++|+
T Consensus 160 l~~n~l~~---------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 160 LHGNRISS---------------------------VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp CCSSCCCE---------------------------ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcccc---------------------------cCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 77776663 334444556677777777777776667777777888888888888
Q ss_pred cccccccccccccccccccccccccCCCC
Q 036011 281 FSGLIPHTFGNLRFLSVLNLANNYLTTDS 309 (977)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 309 (977)
+++..+..|..+++|+.|++++|++....
T Consensus 213 l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 213 LSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 87776666777788888888888776544
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=3.7e-28 Score=263.19 Aligned_cols=254 Identities=25% Similarity=0.219 Sum_probs=123.0
Q ss_pred eEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCc
Q 036011 248 RVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLT 327 (977)
Q Consensus 248 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~ 327 (977)
++++.+++.++ .+|..+ .++|++|+|++|+++++.+..|..+++|++|++++|.++.+.+.
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~---------------- 74 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAA---------------- 74 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT----------------
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHh----------------
Confidence 44555555555 344433 24566666666666655555555555555555555555443222
Q ss_pred eEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCc-cCCCCChhhhccCCCCEEEeec
Q 036011 328 TLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINA-LNGTIPSTVGRLEQLQGLSLYG 406 (977)
Q Consensus 328 ~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~ 406 (977)
.|..+++|++|++++|. +....|..|..+++|++|++++
T Consensus 75 ----------------------------------------~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~ 114 (285)
T 1ozn_A 75 ----------------------------------------AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDR 114 (285)
T ss_dssp ----------------------------------------TTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTT
T ss_pred ----------------------------------------hcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCC
Confidence 22233333333333333 3333344444444555555555
Q ss_pred ccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCc
Q 036011 407 NNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLP 486 (977)
Q Consensus 407 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 486 (977)
|.+++..|..+..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++..|
T Consensus 115 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 194 (285)
T 1ozn_A 115 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194 (285)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCH
Confidence 55544444444444555555555555544444445555555555555555554444445555555555555555554445
Q ss_pred cccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCccc
Q 036011 487 SNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSL 561 (977)
Q Consensus 487 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 561 (977)
..|..+++|+.|++++|++++..+..+..+++|+.|+|++|++....+. ..-+..++.+..+.|.+.+..|..+
T Consensus 195 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 195 HAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGG
T ss_pred hHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchHh
Confidence 5555555555555555555544444455555555555555555432211 1112234444455555555555544
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.9e-29 Score=276.96 Aligned_cols=224 Identities=20% Similarity=0.200 Sum_probs=182.6
Q ss_pred ccccccccCcc-cccCCcccc-------ccccccEEEeecCccCCCCChhh--hccCCCCEEEeecccccCccccccccc
Q 036011 351 LQNFYAYDCKL-TGNIPHEIG-------NLRSLIVLSLFINALNGTIPSTV--GRLEQLQGLSLYGNNLEGSIPYDLCHL 420 (977)
Q Consensus 351 L~~L~l~~n~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l 420 (977)
++.|++.+|++ ...+|..+. .+++|++|+|++|.+++.+|..+ +.+++|++|+|++|++++. |..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 44455555555 234555554 68899999999999998888876 8899999999999999876 7777777
Q ss_pred -----cccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCC--CCccc--cCcccCceEEccCCCCCCC---Cccc
Q 036011 421 -----ERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSS--IPSSF--WSLEYLLAVNLSSNSLSGS---LPSN 488 (977)
Q Consensus 421 -----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~--~~l~~L~~L~L~~N~l~~~---~p~~ 488 (977)
++|++|++++|++++..|..|..+++|++|+|++|++.+. .|..+ ..+++|+.|+|++|+|++. ....
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 8999999999999988888999999999999999998764 23334 7889999999999999832 1234
Q ss_pred cccccccCeeeCcCCcCCCCcc-hhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCccccccccc
Q 036011 489 IQNLQVLINLDLSRNQLSGDIP-ITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFL 567 (977)
Q Consensus 489 ~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 567 (977)
+..+++|++|+|++|++++.+| ..+..+++|+.|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L 298 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQV 298 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEE
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCC
Confidence 5677899999999999997765 45667899999999999999 6788776 8999999999999965 66 8999999
Q ss_pred CccccCCCccccc
Q 036011 568 KQLNVSHNKLEGE 580 (977)
Q Consensus 568 ~~L~l~~N~l~~~ 580 (977)
++|++++|++++.
T Consensus 299 ~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 299 GNLSLKGNPFLDS 311 (312)
T ss_dssp EEEECTTCTTTCC
T ss_pred CEEeccCCCCCCC
Confidence 9999999999863
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=274.84 Aligned_cols=253 Identities=22% Similarity=0.246 Sum_probs=178.2
Q ss_pred eEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccc
Q 036011 43 ISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLS 122 (977)
Q Consensus 43 v~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 122 (977)
..|... ...++.++.+++ .+|..+. +.++.|+|++|++++..+..|.++++|++|+|++|++++..+..|..++
T Consensus 39 C~C~~~---~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~ 112 (440)
T 3zyj_A 39 CSCSNQ---FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLA 112 (440)
T ss_dssp SEECTT---SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCS
T ss_pred CEeCCC---CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCc
Confidence 456432 345778888888 7888765 7899999999999998889999999999999999999977778999999
Q ss_pred cCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecc-cccccCCccccCCCCCceEEe
Q 036011 123 KLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYN-NLQGEIPSEIGNLQNLEILVL 201 (977)
Q Consensus 123 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n-~i~~~~p~~l~~l~~L~~L~l 201 (977)
+|++|+|++|++++..+..|.++++|++|++++|.|....+..|.++++|++|+|++| .+....+..|.++++|++|+|
T Consensus 113 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L 192 (440)
T 3zyj_A 113 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 192 (440)
T ss_dssp SCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEEC
T ss_pred cCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecC
Confidence 9999999999999777778889999999999999988777778888888999998884 444333446888888888888
Q ss_pred eccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeeccccc
Q 036011 202 GMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSF 281 (977)
Q Consensus 202 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 281 (977)
++|+++.. | .+..+++|+.|+|++|+++ .+++..+..+++|++|+|++|++++..+..|..+++|++|+|++|++
T Consensus 193 ~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 267 (440)
T 3zyj_A 193 AMCNLREI-P-NLTPLIKLDELDLSGNHLS---AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 267 (440)
T ss_dssp TTSCCSSC-C-CCTTCSSCCEEECTTSCCC---EECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCC
T ss_pred CCCcCccc-c-ccCCCcccCEEECCCCccC---ccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCC
Confidence 88888732 2 3444555555555555544 23334444445555555555555444444444444555555555555
Q ss_pred ccccccccccccccccccccccccC
Q 036011 282 SGLIPHTFGNLRFLSVLNLANNYLT 306 (977)
Q Consensus 282 ~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (977)
+.+.+..|..+++|+.|+|++|.+.
T Consensus 268 ~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 268 TLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CccChhHhccccCCCEEEcCCCCcc
Confidence 4444444444444444444444443
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=9.1e-28 Score=278.12 Aligned_cols=232 Identities=23% Similarity=0.245 Sum_probs=204.1
Q ss_pred ccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeee
Q 036011 349 ASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRL 428 (977)
Q Consensus 349 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 428 (977)
..++.|++.+|++++..|..|..+++|++|+|++|.+++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 34556666666666667778889999999999999999888899999999999999999999777777999999999999
Q ss_pred cCCccCCCchhhhcCCCCCCeeecCC-CcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCC
Q 036011 429 NGNKLSGPIPQCLASLISLRELNLGS-NKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSG 507 (977)
Q Consensus 429 ~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 507 (977)
++|+++...+..|..+++|++|++++ |.+....+..|.++++|+.|+|++|++++. | .+..+++|++|+|++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 99999977777899999999999998 556655556799999999999999999854 4 58889999999999999998
Q ss_pred CcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCC
Q 036011 508 DIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 508 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 582 (977)
..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 889999999999999999999998889999999999999999999997777788999999999999999987654
No 315
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=9.8e-28 Score=276.80 Aligned_cols=231 Identities=24% Similarity=0.278 Sum_probs=203.4
Q ss_pred cccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeec
Q 036011 350 SLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLN 429 (977)
Q Consensus 350 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 429 (977)
.++.|++.+|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 45555566666666667788899999999999999998888999999999999999999997777789999999999999
Q ss_pred CCccCCCchhhhcCCCCCCeeecCC-CcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCC
Q 036011 430 GNKLSGPIPQCLASLISLRELNLGS-NKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGD 508 (977)
Q Consensus 430 ~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 508 (977)
+|+++...+..|..+++|++|+|++ |.+....+..|.++++|+.|+|++|+++. +| .+..+++|++|+|++|++++.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCcc
Confidence 9999977777899999999999999 45555555689999999999999999984 45 488899999999999999988
Q ss_pred cchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCC
Q 036011 509 IPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 509 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 582 (977)
.|..|..+++|+.|+|++|++++..|..|.++++|+.|||++|+|++..+..|..+++|+.|+|++|+|.+...
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 88999999999999999999999889999999999999999999998777888999999999999999987653
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=5.2e-29 Score=274.02 Aligned_cols=180 Identities=20% Similarity=0.157 Sum_probs=113.4
Q ss_pred CCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCcccc-CcccCceEE
Q 036011 397 EQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFW-SLEYLLAVN 475 (977)
Q Consensus 397 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ 475 (977)
++|++|++++|++++..+.. +++|+.|++++|++++..+..+..+++|++|+|++|++++..+..+. .+++|+.|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 34444444444444332222 34455555555555544444555555555555555555544444442 455566666
Q ss_pred ccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccC-
Q 036011 476 LSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLS- 554 (977)
Q Consensus 476 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~- 554 (977)
|++|.|++. + ....+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++
T Consensus 176 L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 176 LQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp CTTSCCCEE-E-CCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBH
T ss_pred CCCCcCccc-c-cccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccC
Confidence 666665533 2 2223677788888888887 45555778888888888888888 46777888888888888888887
Q ss_pred CCCCcccccccccCccccC-CCcccccCCC
Q 036011 555 GEIPKSLEALLFLKQLNVS-HNKLEGEIPA 583 (977)
Q Consensus 555 ~~~p~~~~~l~~L~~L~l~-~N~l~~~~p~ 583 (977)
+.+|..+..++.|+.++++ .+.++|..|.
T Consensus 252 ~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 252 GTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cCHHHHHhccccceEEECCCchhccCCchh
Confidence 6677778888888888888 4467776664
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1e-28 Score=271.76 Aligned_cols=268 Identities=21% Similarity=0.188 Sum_probs=201.2
Q ss_pred CceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCC
Q 036011 246 NLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRN 325 (977)
Q Consensus 246 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~ 325 (977)
+++.++++.+.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++.++ +..+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---------~~~l~~ 81 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---------LESLST 81 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---------ETTCTT
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---------hhhcCC
Confidence 46666777777765544555566678888888888887777777888888888888887765331 566777
Q ss_pred CceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEee
Q 036011 326 LTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLY 405 (977)
Q Consensus 326 L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 405 (977)
|++|++++|.+++ +...++|++|++++|.+++..+.. +++|++|+++
T Consensus 82 L~~L~Ls~n~l~~------------------------------l~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~ 128 (317)
T 3o53_A 82 LRTLDLNNNYVQE------------------------------LLVGPSIETLHAANNNISRVSCSR---GQGKKNIYLA 128 (317)
T ss_dssp CCEEECCSSEEEE------------------------------EEECTTCCEEECCSSCCSEEEECC---CSSCEEEECC
T ss_pred CCEEECcCCcccc------------------------------ccCCCCcCEEECCCCccCCcCccc---cCCCCEEECC
Confidence 7777777776542 123368888888888888655443 5778888888
Q ss_pred cccccCccccccccccccceeeecCCccCCCchhhhc-CCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCC
Q 036011 406 GNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLA-SLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGS 484 (977)
Q Consensus 406 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 484 (977)
+|++++..+..+..+++|+.|++++|++++..+..+. .+++|++|+|++|++++. + ....+++|+.|+|++|+|++
T Consensus 129 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~- 205 (317)
T 3o53_A 129 NNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF- 205 (317)
T ss_dssp SSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-
T ss_pred CCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-
Confidence 8888877777888888888888888888877676664 678888888888888855 2 23347888888888888885
Q ss_pred CccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcccc-ccccccccCccccCeeeccC-CccCCCCCc
Q 036011 485 LPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFE-GPIPQTFGSLTGLESLDLSN-NNLSGEIPK 559 (977)
Q Consensus 485 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~ 559 (977)
+|..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|++++ +.++|..|.
T Consensus 206 l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 206 MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 4555888888888888888888 57778888888888888888888 67788888888888888884 456655443
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.8e-26 Score=273.69 Aligned_cols=269 Identities=26% Similarity=0.327 Sum_probs=142.8
Q ss_pred cceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeeccccccccccccccccccccc
Q 036011 218 STITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSV 297 (977)
Q Consensus 218 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 297 (977)
.+++.|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+.+ |. .+++|++
T Consensus 40 ~~l~~L~ls~n~L~---~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~ 105 (622)
T 3g06_A 40 NGNAVLNVGESGLT---TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSL-PV---LPPGLLE 105 (622)
T ss_dssp HCCCEEECCSSCCS---CCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCC-CC---CCTTCCE
T ss_pred CCCcEEEecCCCcC---ccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcC-CC---CCCCCCE
Confidence 34666666666666 4444333 56666666666666 3444 345566666666666543 32 4455666
Q ss_pred ccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccE
Q 036011 298 LNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIV 377 (977)
Q Consensus 298 L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 377 (977)
|++++|.++.++. .+++|+.|++++|.+++ +|.. +++|++
T Consensus 106 L~Ls~N~l~~l~~-----------~l~~L~~L~L~~N~l~~--------------------------lp~~---l~~L~~ 145 (622)
T 3g06_A 106 LSIFSNPLTHLPA-----------LPSGLCKLWIFGNQLTS--------------------------LPVL---PPGLQE 145 (622)
T ss_dssp EEECSCCCCCCCC-----------CCTTCCEEECCSSCCSC--------------------------CCCC---CTTCCE
T ss_pred EECcCCcCCCCCC-----------CCCCcCEEECCCCCCCc--------------------------CCCC---CCCCCE
Confidence 6666665555432 23445555555554442 2221 255666
Q ss_pred EEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcC
Q 036011 378 LSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKF 457 (977)
Q Consensus 378 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 457 (977)
|++++|.+++ +|. .+++|+.|++++|.|++ +| ..+++|+.|++++|++++ +|. .+++|+.|++++|++
T Consensus 146 L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l 213 (622)
T 3g06_A 146 LSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRL 213 (622)
T ss_dssp EECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCcc
Confidence 6666666663 332 23456666666666663 33 334556666666666653 332 134566666666666
Q ss_pred CCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccc
Q 036011 458 SSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTF 537 (977)
Q Consensus 458 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 537 (977)
+. +|.. +++|+.|++++|+|++ +| ..+++|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|
T Consensus 214 ~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l 280 (622)
T 3g06_A 214 TS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESL 280 (622)
T ss_dssp SS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGG
T ss_pred cc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHH
Confidence 52 3322 2455556666665553 33 23345555555555555 3443 3455555555555555 445555
Q ss_pred cCccccCeeeccCCccCCCCCccccccc
Q 036011 538 GSLTGLESLDLSNNNLSGEIPKSLEALL 565 (977)
Q Consensus 538 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 565 (977)
.++++|+.|+|++|++++.+|..+..++
T Consensus 281 ~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 281 IHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp GGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred hhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 5555555555555555555555444443
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.2e-26 Score=248.94 Aligned_cols=217 Identities=21% Similarity=0.282 Sum_probs=165.0
Q ss_pred CCCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCC
Q 036011 35 QPICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSF 114 (977)
Q Consensus 35 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 114 (977)
.++|.|.|+.|.... .++.+++++++++ .+|..+. +.|++|+|++|++++..+..|.++++|++|+|++|++++..
T Consensus 2 ~~~C~~~~~~C~c~~-~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN-NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEET-TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCC-CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 579999999997643 4678999999999 6888764 68999999999999977778999999999999999999544
Q ss_pred CccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCC
Q 036011 115 PSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQ 194 (977)
Q Consensus 115 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~ 194 (977)
+..++.+++|++|+|++|++++..+..|.++++|++|++++|.+++..+..|+.+++|++|+|++|++++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 55678899999999999999977667778888888888888888877777778888888888888888865555677888
Q ss_pred CCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceE
Q 036011 195 NLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGL 274 (977)
Q Consensus 195 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 274 (977)
+|+.|++++|++++..+..|..++ +|++|+|++|++++..+..+..+++|++|
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~---------------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 210 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLT---------------------------ELKTLKLDNNQLKRVPEGAFDSLEKLKML 210 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCT---------------------------TCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred ccceeEecCCcCcEeChhHhccCC---------------------------CcCEEECCCCcCCcCCHHHhccccCCCEE
Confidence 888888888877755444444444 45555555555553333445555556666
Q ss_pred eecccccc
Q 036011 275 DLSFNSFS 282 (977)
Q Consensus 275 ~Ls~N~l~ 282 (977)
+|++|.+.
T Consensus 211 ~l~~N~~~ 218 (270)
T 2o6q_A 211 QLQENPWD 218 (270)
T ss_dssp ECCSSCBC
T ss_pred EecCCCee
Confidence 66666554
No 320
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=7.9e-28 Score=283.70 Aligned_cols=184 Identities=18% Similarity=0.105 Sum_probs=131.5
Q ss_pred ccCcceEEEEEEE-eCCCCEEEEEEeeccc----------hhhHHHHHHHHHHHHhc-CCCCcceEeeeeecCCeeEEEE
Q 036011 691 LGRGSFGSVYKGT-FSDGTSFAIKVFNLQL----------DRAFRSFDSECEVLRNV-RHRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 691 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 758 (977)
.+.|++|.+..++ ..-|+.||||++.+.. +...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 5667777666654 2358999999997542 23456799999999999 7999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCC
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDD 838 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 838 (977)
||++|++|.+++...+. ++.. +|+.||+.||+|+| ++|||||||||+|||++++|.+||+|||+|+.......
T Consensus 322 Eyv~G~~L~d~i~~~~~-l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE-IDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp ECCCSEEHHHHHHTTCC-CCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred ecCCCCcHHHHHHhCCC-CCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 99999999999987654 5543 58999999999999 89999999999999999999999999999987654322
Q ss_pred cceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCC
Q 036011 839 SVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKP 884 (977)
Q Consensus 839 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 884 (977)
.....+||++|||||++.+. +..++|+||+|++++++.++..|
T Consensus 395 --~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 395 --WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred --cccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 23345799999999998764 67789999999998888766443
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=3.2e-30 Score=310.44 Aligned_cols=463 Identities=15% Similarity=0.132 Sum_probs=219.6
Q ss_pred CCCcccceEecCCCCcEEEEEcCCCCCCccCC-ccccCcccccEeeccCCcccc---cCCCC------------cCCCCC
Q 036011 36 PICKWVGISCGARHQRVRALNLSNMGLRGTIP-PHLGNFSFLMSLDISKNNFHA---YLPNE------------LGQLRR 99 (977)
Q Consensus 36 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~-~~l~~l~~L~~L~L~~n~l~~---~~p~~------------~~~l~~ 99 (977)
-|++|.++.. .....++++++... .| ..+..+++|++|+|+++.... ..|.. ...+++
T Consensus 33 vck~W~~~~~----~~~~~l~~~~~~~~--~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~ 106 (594)
T 2p1m_B 33 VCKSWYEIER----WCRRKVFIGNCYAV--SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTW 106 (594)
T ss_dssp SCHHHHHHHH----HHCCEEEESSTTSS--CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTT
T ss_pred HHHHHHHhhh----hhceEEeecccccc--CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCC
Confidence 3558998832 12345666654332 33 346678889999999875321 12222 234567
Q ss_pred CCEEeCcCccCCCCCCcccc-ccccCcEEeccCc-CCCCC-CCCcccCcCcccceeccccccccccCcccc----Ccccc
Q 036011 100 LRFISLDYNEFSGSFPSWIG-VLSKLQILSLRNN-SFTGP-IPNSLFNLSRLEKWDSMFNIIDGNIPSRIG----NLSSL 172 (977)
Q Consensus 100 L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~----~l~~L 172 (977)
|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|++++|.+++..+..+. .+++|
T Consensus 107 L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L 186 (594)
T 2p1m_B 107 LEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSL 186 (594)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCC
T ss_pred CCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcC
Confidence 77777777776655555554 5677777777776 34321 222233566666666666665544333332 34456
Q ss_pred ceeeeeccc--cccc-CCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceE
Q 036011 173 VNVNLAYNN--LQGE-IPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRV 249 (977)
Q Consensus 173 ~~L~L~~n~--i~~~-~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~ 249 (977)
++|++++|. ++.. ++..+.++++|+.|++++|...+.++..+..+++|+.|+++.+..
T Consensus 187 ~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~------------------- 247 (594)
T 2p1m_B 187 VSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTA------------------- 247 (594)
T ss_dssp CEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCC-------------------
T ss_pred cEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccC-------------------
Confidence 666666554 1100 111123345666666665522112444444555555555433311
Q ss_pred EEecCceeeecCCcccccccccceE-eecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCce
Q 036011 250 FSLGKNKLTGTIPNSITNASKLTGL-DLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTT 328 (977)
Q Consensus 250 L~L~~N~l~~~~p~~l~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~ 328 (977)
+++.|.+.+ ++..+.++++|+.| .+.+.... .++..+..+++|++|++++|.++... ....+..+++|++
T Consensus 248 -~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~~~~~~L~~L~L~~~~l~~~~------l~~~~~~~~~L~~ 318 (594)
T 2p1m_B 248 -EVRPDVYSG-LSVALSGCKELRCLSGFWDAVPA-YLPAVYSVCSRLTTLNLSYATVQSYD------LVKLLCQCPKLQR 318 (594)
T ss_dssp -CCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG-GGGGGHHHHTTCCEEECTTCCCCHHH------HHHHHTTCTTCCE
T ss_pred -ccchhhHHH-HHHHHhcCCCcccccCCcccchh-hHHHHHHhhCCCCEEEccCCCCCHHH------HHHHHhcCCCcCE
Confidence 022333332 23345566666666 33333222 23334445566666666666643211 1112345556666
Q ss_pred EEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeec---------CccCCCCChhhh-ccCC
Q 036011 329 LAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFI---------NALNGTIPSTVG-RLEQ 398 (977)
Q Consensus 329 L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~---------N~l~~~~p~~~~-~l~~ 398 (977)
|++++| +... .++.....+++|++|++.+ +.+++.....+. .+++
T Consensus 319 L~l~~~-~~~~------------------------~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~ 373 (594)
T 2p1m_B 319 LWVLDY-IEDA------------------------GLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPK 373 (594)
T ss_dssp EEEEGG-GHHH------------------------HHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTT
T ss_pred EeCcCc-cCHH------------------------HHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchh
Confidence 666554 2100 0011112244455555422 222222112222 2455
Q ss_pred CCEEEeecccccCccccccc-cccccceeeec--C----CccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccC
Q 036011 399 LQGLSLYGNNLEGSIPYDLC-HLERLNGIRLN--G----NKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYL 471 (977)
Q Consensus 399 L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 471 (977)
|++|.++.|++++..+..+. .+++|+.|+++ + |.++....+. .++..+..+++|
T Consensus 374 L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~-------------------~~~~l~~~~~~L 434 (594)
T 2p1m_B 374 LESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI-------------------GFGAIVEHCKDL 434 (594)
T ss_dssp CCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH-------------------HHHHHHHHCTTC
T ss_pred HHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh-------------------HHHHHHhhCCCc
Confidence 55555555554433333332 24444444444 2 2222110000 000112334445
Q ss_pred ceEEccCCCCCCCCcccccc-ccccCeeeCcCCcCCCCcchhh-hcccccceeccCCccccccccc-cccCccccCeeec
Q 036011 472 LAVNLSSNSLSGSLPSNIQN-LQVLINLDLSRNQLSGDIPITI-GSLKDLVTLSLASNQFEGPIPQ-TFGSLTGLESLDL 548 (977)
Q Consensus 472 ~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L 548 (977)
+.|++++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|+|
T Consensus 435 ~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l 513 (594)
T 2p1m_B 435 RRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWM 513 (594)
T ss_dssp CEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEE
T ss_pred cEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEee
Confidence 5555543 333222233332 5566666666666654433333 4566777777777776543333 3344677777777
Q ss_pred cCCccCCCCCccc-ccccccCccccCCCcc
Q 036011 549 SNNNLSGEIPKSL-EALLFLKQLNVSHNKL 577 (977)
Q Consensus 549 s~N~l~~~~p~~~-~~l~~L~~L~l~~N~l 577 (977)
++|+++......+ ..++.|+...+..+.-
T Consensus 514 ~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 514 SSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp ESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred eCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 7777643222233 3456665555555543
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.1e-29 Score=300.82 Aligned_cols=209 Identities=14% Similarity=0.088 Sum_probs=140.1
Q ss_pred ccccccccEEEeecCccCCCCC-hhhhccCCCCEEEeecccccCc-cccccccccccceeee---------cCCccCCCc
Q 036011 369 IGNLRSLIVLSLFINALNGTIP-STVGRLEQLQGLSLYGNNLEGS-IPYDLCHLERLNGIRL---------NGNKLSGPI 437 (977)
Q Consensus 369 ~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L---------~~N~l~~~~ 437 (977)
+..+++|+.|++++|.+++... ..+..+++|++|++++| +... ++.....+++|+.|++ +.|.+++..
T Consensus 285 ~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~ 363 (594)
T 2p1m_B 285 YSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQG 363 (594)
T ss_dssp HHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHH
T ss_pred HHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHH
Confidence 3455666666666666543222 22446667777777666 3322 2222234666777766 334554333
Q ss_pred hhhhc-CCCCCCeeecCCCcCCCCCCcccc-CcccCceEEcc--C----CCCCCC-----CccccccccccCeeeCcCCc
Q 036011 438 PQCLA-SLISLRELNLGSNKFSSSIPSSFW-SLEYLLAVNLS--S----NSLSGS-----LPSNIQNLQVLINLDLSRNQ 504 (977)
Q Consensus 438 p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~ 504 (977)
...+. .+++|+.|.++.|++++..+..+. .+++|+.|+++ + |.+++. ++..+..+++|+.|+|++ .
T Consensus 364 l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~ 442 (594)
T 2p1m_B 364 LVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-L 442 (594)
T ss_dssp HHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-S
T ss_pred HHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-c
Confidence 33333 477788888877877765555554 47788888888 4 556532 122367789999999988 7
Q ss_pred CCCCcchhhhc-ccccceeccCCccccccccccc-cCccccCeeeccCCccCCCCCc-ccccccccCccccCCCcccc
Q 036011 505 LSGDIPITIGS-LKDLVTLSLASNQFEGPIPQTF-GSLTGLESLDLSNNNLSGEIPK-SLEALLFLKQLNVSHNKLEG 579 (977)
Q Consensus 505 l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~ 579 (977)
+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+. .+..+++|++|++++|+++.
T Consensus 443 l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 443 LTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred ccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 77666666666 8999999999999987666555 6789999999999999654443 44568999999999999853
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=7e-26 Score=244.02 Aligned_cols=217 Identities=23% Similarity=0.232 Sum_probs=189.7
Q ss_pred cCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcC
Q 036011 364 NIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLAS 443 (977)
Q Consensus 364 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 443 (977)
.+|..+. ++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|++++..+..|..
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 3454443 57899999999999777778999999999999999999777778999999999999999999888888999
Q ss_pred CCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCC-CccccccccccCeeeCcCCcCCCCcchhhhcccccc--
Q 036011 444 LISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGS-LPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLV-- 520 (977)
Q Consensus 444 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-- 520 (977)
+++|++|++++|++.+..+..+..+++|+.|++++|++++. +|..|..+++|++|+|++|++++..+..+..+++|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 99999999999999988777899999999999999999874 589999999999999999999977777888888888
Q ss_pred --eeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCCC
Q 036011 521 --TLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIPA 583 (977)
Q Consensus 521 --~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 583 (977)
.|++++|++++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|++++|++++..|.
T Consensus 179 ~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred ceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 899999999976555554 45899999999999977666789999999999999999998875
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.1e-26 Score=270.50 Aligned_cols=192 Identities=20% Similarity=0.139 Sum_probs=129.0
Q ss_pred cccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCe
Q 036011 370 GNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRE 449 (977)
Q Consensus 370 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 449 (977)
..+++|++|+|++|.+++.. ..++|++|++++|.|++..+. .+++|+.|+|++|++++..|..+..+++|+.
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 148 (487)
T 3oja_A 77 ESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQY 148 (487)
T ss_dssp TTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEE
T ss_pred ccCCCCCEEEecCCcCCCCC-----CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCE
Confidence 34444555555555444222 125666666666666654443 2356666666666666666666666667777
Q ss_pred eecCCCcCCCCCCcccc-CcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcc
Q 036011 450 LNLGSNKFSSSIPSSFW-SLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQ 528 (977)
Q Consensus 450 L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 528 (977)
|+|++|.+++..|..+. .+++|+.|+|++|.|++. | .+..+++|++|+|++|+|++ +|..+..+++|+.|+|++|.
T Consensus 149 L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~ 225 (487)
T 3oja_A 149 LDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNK 225 (487)
T ss_dssp EECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSC
T ss_pred EECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCc
Confidence 77777777666666665 566777777777777644 2 23347778888888888875 44557888888888888888
Q ss_pred ccccccccccCccccCeeeccCCccC-CCCCcccccccccCccccC
Q 036011 529 FEGPIPQTFGSLTGLESLDLSNNNLS-GEIPKSLEALLFLKQLNVS 573 (977)
Q Consensus 529 l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~ 573 (977)
|++ +|..+..+++|+.|+|++|++. +.+|..+..++.|+.++++
T Consensus 226 l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 226 LVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred Ccc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 884 6777888888888888888887 5667777888888888876
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=8.7e-27 Score=271.22 Aligned_cols=171 Identities=21% Similarity=0.153 Sum_probs=131.4
Q ss_pred ccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhc-CCCCCCeee
Q 036011 373 RSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLA-SLISLRELN 451 (977)
Q Consensus 373 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ 451 (977)
++|++|++++|.+++..+. .+++|+.|+|++|.+++..|..+..+++|+.|+|++|++++..|..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 4555555555555544433 246677777777777777777777788888888888888777777765 678888888
Q ss_pred cCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcccc-
Q 036011 452 LGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFE- 530 (977)
Q Consensus 452 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~- 530 (977)
|++|.|++..+ +..+++|+.|+|++|.|++ +|..|..+++|+.|+|++|.|+ .+|..++.+++|+.|++++|.+.
T Consensus 176 Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 176 LQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp CTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCH
T ss_pred cCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcC
Confidence 88888886532 3357888888888888886 4445888899999999999998 47888888999999999999998
Q ss_pred ccccccccCccccCeeeccC
Q 036011 531 GPIPQTFGSLTGLESLDLSN 550 (977)
Q Consensus 531 ~~~p~~~~~l~~L~~L~Ls~ 550 (977)
+.+|..+..++.|+.|+++.
T Consensus 252 ~~~~~~~~~l~~L~~l~~~~ 271 (487)
T 3oja_A 252 GTLRDFFSKNQRVQTVAKQT 271 (487)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred cchHHHHHhCCCCcEEeccc
Confidence 67888888999999888863
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=5.9e-25 Score=236.77 Aligned_cols=227 Identities=22% Similarity=0.215 Sum_probs=168.2
Q ss_pred EEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCC
Q 036011 55 LNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSF 134 (977)
Q Consensus 55 L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 134 (977)
.+..+.++. .+|..+. +.|++|+|++|++++..+..|.++++|++|+|++|++++..+..++.+++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 344555665 6777653 5799999999999997777899999999999999999966677899999999999999999
Q ss_pred CCCCCCcccCcCcccceeccccccccccCccccCccccceeeeeccccccc-CCccccCCCCCceEEeeccCCCCCCchh
Q 036011 135 TGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGE-IPSEIGNLQNLEILVLGMNNLSGPIQPS 213 (977)
Q Consensus 135 ~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~-~p~~l~~l~~L~~L~l~~N~l~~~~~~~ 213 (977)
++..+..|.++++|++|++++|.+.+..+..++++++|++|++++|++++. +|..++++++|++|++++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 988888899999999999999999877777788899999999999998863 5888888999999999999888766666
Q ss_pred hccccceeEEEccCCcccccccCCCccccCCCCce-EEEecCceeeecCCcccccccccceEeecccccccccccccccc
Q 036011 214 IFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLR-VFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNL 292 (977)
Q Consensus 214 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 292 (977)
+..+.+|+ .|. .|++++|++++..+..+. ..+|++|+|++|++++..+..|..+
T Consensus 169 ~~~l~~L~------------------------~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l 223 (276)
T 2z62_A 169 LRVLHQMP------------------------LLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRL 223 (276)
T ss_dssp GHHHHTCT------------------------TCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTC
T ss_pred hhhhhhcc------------------------ccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhccc
Confidence 66655554 111 344444444433232222 2356666666666655555555566
Q ss_pred cccccccccccccCCCC
Q 036011 293 RFLSVLNLANNYLTTDS 309 (977)
Q Consensus 293 ~~L~~L~L~~N~l~~~~ 309 (977)
++|+.|++++|+++...
T Consensus 224 ~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 224 TSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CSCCEEECCSSCBCCCT
T ss_pred ccccEEEccCCcccccC
Confidence 66666666666665543
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=9e-25 Score=234.31 Aligned_cols=206 Identities=26% Similarity=0.261 Sum_probs=172.4
Q ss_pred cccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecC
Q 036011 374 SLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLG 453 (977)
Q Consensus 374 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 453 (977)
+.+.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|+++...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4667888888887 4565443 578888888888887666788888888888888888886666677888899999999
Q ss_pred CCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccc
Q 036011 454 SNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPI 533 (977)
Q Consensus 454 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 533 (977)
+|++++..+..|..+++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 99988777778888899999999999998877888888999999999999998666666888999999999999999877
Q ss_pred cccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCC
Q 036011 534 PQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 534 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 582 (977)
+..|.++++|+.|+|++|++++..+..|..+++|+.|++++|++.+..+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 7788899999999999999987666678889999999999999987665
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.1e-24 Score=235.55 Aligned_cols=206 Identities=23% Similarity=0.208 Sum_probs=177.8
Q ss_pred ccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCC
Q 036011 369 IGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLR 448 (977)
Q Consensus 369 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 448 (977)
+..+++++++++++|.++ .+|..+. ++++.|+|++|.+++..+..|..+++|+.|+|++|++++..+ . ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCC
Confidence 567788899999999888 5565553 688999999999988888889999999999999999985433 2 7888999
Q ss_pred eeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcc
Q 036011 449 ELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQ 528 (977)
Q Consensus 449 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 528 (977)
+|+|++|+|+ .+|..+..+++|+.|++++|+|++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999998 678888899999999999999998777889999999999999999997777778899999999999999
Q ss_pred ccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccC
Q 036011 529 FEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEI 581 (977)
Q Consensus 529 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 581 (977)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|.+..
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 99777777888999999999999998 78888888889999999999997754
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=7.2e-25 Score=235.25 Aligned_cols=220 Identities=25% Similarity=0.217 Sum_probs=192.9
Q ss_pred ccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecC
Q 036011 351 LQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNG 430 (977)
Q Consensus 351 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 430 (977)
+..+.+.++.+... .....+++|+.|++++|.++. + ..+..+++|++|++++|.+++. ..+..+++|++|++++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 33444555554433 235678999999999999873 3 4588999999999999999853 4788999999999999
Q ss_pred CccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcc
Q 036011 431 NKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIP 510 (977)
Q Consensus 431 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 510 (977)
|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 99998888889999999999999999998888889999999999999999998888888999999999999999998777
Q ss_pred hhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCCC
Q 036011 511 ITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIPA 583 (977)
Q Consensus 511 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 583 (977)
..++.+++|+.|+|++|++++..|..|..+++|+.|+|++|++.+. ++.|+.|+++.|.++|.+|.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 7889999999999999999998888899999999999999999865 44689999999999999996
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=6.9e-25 Score=235.42 Aligned_cols=189 Identities=26% Similarity=0.229 Sum_probs=150.8
Q ss_pred ccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCC
Q 036011 369 IGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLR 448 (977)
Q Consensus 369 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 448 (977)
+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++..+..+..+++|++|++++|++++..+..|..+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 45566777777777777642 3677778888888888888876666777888888888888888877777788888888
Q ss_pred eeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcc
Q 036011 449 ELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQ 528 (977)
Q Consensus 449 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 528 (977)
+|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|+|++|++++..|..++.+++|+.|+|++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 88888888887777778888888888888888887777778888888888888888887777778888899999999998
Q ss_pred ccccccccccCccccCeeeccCCccCCCCCcccccccc
Q 036011 529 FEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLF 566 (977)
Q Consensus 529 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 566 (977)
+.+. +++|+.|+++.|+++|.+|.++..++.
T Consensus 217 ~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 217 WDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp BCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 8754 456888999999999999988776644
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=3.1e-24 Score=227.48 Aligned_cols=190 Identities=22% Similarity=0.298 Sum_probs=151.7
Q ss_pred CCCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCC
Q 036011 35 QPICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSF 114 (977)
Q Consensus 35 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 114 (977)
++||.|.|++|... .+.+++++++++ .+|..+. +.|+.|+|++|++++..|..|.++++|++|+|++|++++..
T Consensus 2 ~~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 75 (251)
T 3m19_A 2 KTCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75 (251)
T ss_dssp --CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred ccCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC
Confidence 46899999999532 356899999998 7888775 68999999999999988888999999999999999999877
Q ss_pred CccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCC
Q 036011 115 PSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQ 194 (977)
Q Consensus 115 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~ 194 (977)
|..+..+++|++|+|++|++++..+..|..+++|++|++++|.|++..+..|+++++|++|+|++|+|++..+..|++++
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 155 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCc
Confidence 88899999999999999999977777788888888888888888866666678888888888888888865556788888
Q ss_pred CCceEEeeccCCCCCCchhhccccceeEEEccCCcc
Q 036011 195 NLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQL 230 (977)
Q Consensus 195 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 230 (977)
+|++|+|++|++++..+..+..+++|+.|+|++|.+
T Consensus 156 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCce
Confidence 888888888888755444454444444444444444
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=4.6e-25 Score=258.68 Aligned_cols=186 Identities=17% Similarity=0.169 Sum_probs=147.2
Q ss_pred CcCccccCcceEEEEEEEeCCCCEEEEEEeeccc--------hhhHHHHHHHHHHHHhcCCCCcceEeeeeecCCeeEEE
Q 036011 686 NECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQL--------DRAFRSFDSECEVLRNVRHRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 686 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 757 (977)
...+.||+|+||+||+|+. .++.+|+|+..... ....+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999965 57889999864332 11245589999999999999999766666677788999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCC
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGD 837 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 837 (977)
|||+++++|.+++.. +..++.|+++||+||| +++|+||||||+|||++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999875 5689999999999999 789999999999999999 99999999999875432
Q ss_pred Ccc-----eeeccccCCcccCccccCC--CCcCcccchhhHhHHHHHHhcCCCCCC
Q 036011 838 DSV-----TQTMTIATIGYMAPEYGTE--GIVSSKCDVYSYGVLLTETFTRKKPTD 886 (977)
Q Consensus 838 ~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~ 886 (977)
... ......||+.|||||++.. ..|+.++|+|+..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 111 1124579999999999887 668889999999999999888877763
No 333
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.8e-23 Score=226.12 Aligned_cols=206 Identities=22% Similarity=0.212 Sum_probs=172.3
Q ss_pred ccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCC
Q 036011 319 SLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQ 398 (977)
Q Consensus 319 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 398 (977)
.+..+++++++++++|.++.. |..+. ++++.|+|++|.+++..+..|..+++
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~i--------------------------p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~ 56 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTAL--------------------------PPDLP--KDTTILHLSENLLYTFSLATLMPYTR 56 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSC--------------------------CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTT
T ss_pred cccccCCccEEECCCCCCCcC--------------------------CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCC
Confidence 367778888888888887732 32222 57788888888888777888888888
Q ss_pred CCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccC
Q 036011 399 LQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSS 478 (977)
Q Consensus 399 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 478 (977)
|++|+|++|.|++..+ . ..+++|+.|++++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 57 L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 57 LTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp CCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT
T ss_pred CCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCC
Confidence 9999999988885433 2 78889999999999998 6777888899999999999999988788899999999999999
Q ss_pred CCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCC
Q 036011 479 NSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGE 556 (977)
Q Consensus 479 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 556 (977)
|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++...
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 9999877788889999999999999999665666788999999999999999 6788888889999999999998753
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=9.6e-24 Score=221.96 Aligned_cols=203 Identities=20% Similarity=0.170 Sum_probs=139.6
Q ss_pred cCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCcc-CCCCCCccccccccCcEEeccC-cCCCCCCCCcc
Q 036011 65 TIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNE-FSGSFPSWIGVLSKLQILSLRN-NSFTGPIPNSL 142 (977)
Q Consensus 65 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~l 142 (977)
.+|. +. ..|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|+.+++|++|+|++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5666 43 378999999999998777789999999999999997 7744555788889999999988 88886666677
Q ss_pred cCcCcccceeccccccccccCccccCccccc---eeeeecc-cccccCCccccCCCCCc-eEEeeccCCCCCCchhhccc
Q 036011 143 FNLSRLEKWDSMFNIIDGNIPSRIGNLSSLV---NVNLAYN-NLQGEIPSEIGNLQNLE-ILVLGMNNLSGPIQPSIFNI 217 (977)
Q Consensus 143 ~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~---~L~L~~n-~i~~~~p~~l~~l~~L~-~L~l~~N~l~~~~~~~l~~l 217 (977)
.++++|++|++++|.+++ +|. |+.+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++ .
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~-------- 170 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-S-------- 170 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-E--------
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-c--------
Confidence 777777777777777764 555 66666666 7777777 66654455566666776 6766666665 2
Q ss_pred cceeEEEccCCcccccccCCCccccCCCCceEEEecCce-eeecCCcccccc-cccceEeeccccccccccccccccccc
Q 036011 218 STITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNK-LTGTIPNSITNA-SKLTGLDLSFNSFSGLIPHTFGNLRFL 295 (977)
Q Consensus 218 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L 295 (977)
+|+..+.. ++|++|+|++|+ ++...+..|..+ ++|++|++++|+++.+.+. .+++|
T Consensus 171 ------------------i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L 228 (239)
T 2xwt_C 171 ------------------VQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHL 228 (239)
T ss_dssp ------------------ECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTC
T ss_pred ------------------cCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccC
Confidence 33333333 556666666663 654445556666 6677777777777654333 45566
Q ss_pred cccccccc
Q 036011 296 SVLNLANN 303 (977)
Q Consensus 296 ~~L~L~~N 303 (977)
+.|+++++
T Consensus 229 ~~L~l~~~ 236 (239)
T 2xwt_C 229 KELIARNT 236 (239)
T ss_dssp SEEECTTC
T ss_pred ceeeccCc
Confidence 66666654
No 335
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=2e-25 Score=252.88 Aligned_cols=205 Identities=20% Similarity=0.203 Sum_probs=140.6
Q ss_pred ccccccccEEEeecCccCC----CCChhhhccCCCCEEEeecccccCccccccc----cc---------cccceeeecCC
Q 036011 369 IGNLRSLIVLSLFINALNG----TIPSTVGRLEQLQGLSLYGNNLEGSIPYDLC----HL---------ERLNGIRLNGN 431 (977)
Q Consensus 369 ~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~L~~N 431 (977)
+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|+.|++++|
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n 169 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 169 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCC
Confidence 4566777777777777775 3667777888888888888887644333333 33 78888888888
Q ss_pred ccC-CCch---hhhcCCCCCCeeecCCCcCCC-----CCCccccCcccCceEEccCCCCC----CCCccccccccccCee
Q 036011 432 KLS-GPIP---QCLASLISLRELNLGSNKFSS-----SIPSSFWSLEYLLAVNLSSNSLS----GSLPSNIQNLQVLINL 498 (977)
Q Consensus 432 ~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L 498 (977)
+++ +.++ ..+..+++|++|+|++|+++. ..|..+..+++|+.|+|++|.++ +.+|..+..+++|++|
T Consensus 170 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 170 RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp CCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred CCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 876 3444 466677788888888888772 33446777778888888888775 4566777777888888
Q ss_pred eCcCCcCCCC----cchhhhc--ccccceeccCCccccc----cccccc-cCccccCeeeccCCccCCCCC--ccc-ccc
Q 036011 499 DLSRNQLSGD----IPITIGS--LKDLVTLSLASNQFEG----PIPQTF-GSLTGLESLDLSNNNLSGEIP--KSL-EAL 564 (977)
Q Consensus 499 ~Ls~N~l~~~----~p~~~~~--l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~p--~~~-~~l 564 (977)
+|++|++++. +|..+.. +++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..+ ..+ ..+
T Consensus 250 ~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l 329 (386)
T 2ca6_A 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVF 329 (386)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHH
T ss_pred ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHHHh
Confidence 8888887754 4555533 7778888888888876 366666 557788888888888876653 333 234
Q ss_pred cccCccccC
Q 036011 565 LFLKQLNVS 573 (977)
Q Consensus 565 ~~L~~L~l~ 573 (977)
+.++.+++.
T Consensus 330 ~~~~~~~l~ 338 (386)
T 2ca6_A 330 STRGRGELD 338 (386)
T ss_dssp HHHTCCEEC
T ss_pred hhcCcchhh
Confidence 555544443
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=6.4e-24 Score=232.67 Aligned_cols=203 Identities=18% Similarity=0.159 Sum_probs=162.7
Q ss_pred ccccccEEEeecCccCCCCChhh--hccCCCCEEEeecccccCccc----cccccccccceeeecCCccCCCchhhhcCC
Q 036011 371 NLRSLIVLSLFINALNGTIPSTV--GRLEQLQGLSLYGNNLEGSIP----YDLCHLERLNGIRLNGNKLSGPIPQCLASL 444 (977)
Q Consensus 371 ~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 444 (977)
.+++|++|++++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|++++|++++..|..|..+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 34668888888888888888877 888888888888888886544 345578888899999998888888888888
Q ss_pred CCCCeeecCCCcCCCC---C-CccccCcccCceEEccCCCCCCCCcc----ccccccccCeeeCcCCcCCCCcchhhhcc
Q 036011 445 ISLRELNLGSNKFSSS---I-PSSFWSLEYLLAVNLSSNSLSGSLPS----NIQNLQVLINLDLSRNQLSGDIPITIGSL 516 (977)
Q Consensus 445 ~~L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 516 (977)
++|++|+|++|++.+. . +..+..+++|++|+|++|+++. ++. .+..+++|++|+|++|++++..|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 8999999999987642 1 2334678889999999998873 333 35777899999999999987778777776
Q ss_pred ---cccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccc
Q 036011 517 ---KDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEG 579 (977)
Q Consensus 517 ---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 579 (977)
++|+.|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.|++++|+++.
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 5677664 7999999999999853 43 6788999999999999864
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2.3e-25 Score=249.78 Aligned_cols=264 Identities=15% Similarity=0.135 Sum_probs=164.6
Q ss_pred EEcCCCCCCccCCccccCcccccEeeccCCcccccCC----CCcCCCC-CCCEEeCcCccCCCCCCcccccc-----ccC
Q 036011 55 LNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLP----NELGQLR-RLRFISLDYNEFSGSFPSWIGVL-----SKL 124 (977)
Q Consensus 55 L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~L 124 (977)
++|+.++++|.+|..+...+.|++|||++|.+++..+ +.|..++ +|++|+|++|.+++..+..++.+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5678888888777777777778888888888887555 6677777 78888888888887667777665 788
Q ss_pred cEEeccCcCCCCCCCCcccCc-----CcccceeccccccccccCccccC-----ccccceeeeecccccccCC----ccc
Q 036011 125 QILSLRNNSFTGPIPNSLFNL-----SRLEKWDSMFNIIDGNIPSRIGN-----LSSLVNVNLAYNNLQGEIP----SEI 190 (977)
Q Consensus 125 ~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~l~~n~i~~~~p~~~~~-----l~~L~~L~L~~n~i~~~~p----~~l 190 (977)
++|+|++|.+++..+..+... ++|++|++++|.|++..+..++. .++|++|+|++|+++...+ ..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 888888888876666544433 67777777777776555544332 2467777777777664332 223
Q ss_pred cCCC-CCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCC-CCceEEEecCceeeec----CCcc
Q 036011 191 GNLQ-NLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSL-PNLRVFSLGKNKLTGT----IPNS 264 (977)
Q Consensus 191 ~~l~-~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l-~~L~~L~L~~N~l~~~----~p~~ 264 (977)
..++ +|++|+|++|++++..+..+... +..+ ++|++|+|++|+++.. ++..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~-----------------------l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~ 219 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKF-----------------------LASIPASVTSLDLSANLLGLKSYAELAYI 219 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHH-----------------------HHTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHH-----------------------HHhCCCCCCEEECCCCCCChhHHHHHHHH
Confidence 3443 66666666666665554433322 1112 2445555555554421 3333
Q ss_pred ccc-ccccceEeecccccccccc----cccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCC
Q 036011 265 ITN-ASKLTGLDLSFNSFSGLIP----HTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGI 339 (977)
Q Consensus 265 l~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 339 (977)
+.. .++|++|+|++|++++..+ ..+..+++|++|+|++|.+..+.+.....+...+..+++|+.|++++|++...
T Consensus 220 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 220 FSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 433 2366666666666655433 23455566777777777665555443333444566777777777777777654
Q ss_pred CC
Q 036011 340 LP 341 (977)
Q Consensus 340 ~p 341 (977)
.+
T Consensus 300 ~~ 301 (362)
T 3goz_A 300 HS 301 (362)
T ss_dssp GC
T ss_pred ch
Confidence 33
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=3.9e-25 Score=245.69 Aligned_cols=269 Identities=19% Similarity=0.225 Sum_probs=183.5
Q ss_pred CCCCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCc--ccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCC
Q 036011 34 SQPICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNF--SFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFS 111 (977)
Q Consensus 34 ~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 111 (977)
+.-|.+|.++.|+. ..++.||++++.+. |..++.+ +.++.|++++|.+.+..+. +..+++|++|+|++|.++
T Consensus 33 ~~vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~ 106 (336)
T 2ast_B 33 SGVCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIE 106 (336)
T ss_dssp TSSCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEEC
T ss_pred HHHHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcC
Confidence 34466899999863 35788999998886 5667777 8899999999999986554 667899999999999988
Q ss_pred CC-CCccccccccCcEEeccCcCCCCCCCCcccCcCcccceecccc-ccccc-cCccccCccccceeeeecc-ccccc-C
Q 036011 112 GS-FPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFN-IIDGN-IPSRIGNLSSLVNVNLAYN-NLQGE-I 186 (977)
Q Consensus 112 ~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n-~i~~~-~p~~~~~l~~L~~L~L~~n-~i~~~-~ 186 (977)
+. +|..++.+++|++|+|++|.+++..|..+..+++|++|++++| .+++. ++..+.++++|++|++++| .+++. +
T Consensus 107 ~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~ 186 (336)
T 2ast_B 107 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHV 186 (336)
T ss_dssp HHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHH
T ss_pred HHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHH
Confidence 65 8888888999999999999888766777777777777777777 56542 5555666777777777777 66643 4
Q ss_pred CccccCCC-CCceEEeecc--CCC-CCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCce-eeecC
Q 036011 187 PSEIGNLQ-NLEILVLGMN--NLS-GPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNK-LTGTI 261 (977)
Q Consensus 187 p~~l~~l~-~L~~L~l~~N--~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~ 261 (977)
+..+..++ +|++|++++| .++ +.++..+. .+++|++|++++|. +++..
T Consensus 187 ~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~---------------------------~~~~L~~L~l~~~~~l~~~~ 239 (336)
T 2ast_B 187 QVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR---------------------------RCPNLVHLDLSDSVMLKNDC 239 (336)
T ss_dssp HHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH---------------------------HCTTCSEEECTTCTTCCGGG
T ss_pred HHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh---------------------------hCCCCCEEeCCCCCcCCHHH
Confidence 55566666 6777777666 333 22233333 34556666666665 44455
Q ss_pred CcccccccccceEeecccc-cccccccccccccccccccccccccCCCCCCchhhhhcccccC-CCCceEEecCCCCCCC
Q 036011 262 PNSITNASKLTGLDLSFNS-FSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNC-RNLTTLAVASNPLRGI 339 (977)
Q Consensus 262 p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l-~~L~~L~L~~N~l~~~ 339 (977)
+..+..+++|++|++++|. +.......+..+++|+.|++++| ++. .. +..+ .++..|++++|.+++.
T Consensus 240 ~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~-------~~~l~~~l~~L~l~~n~l~~~ 308 (336)
T 2ast_B 240 FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GT-------LQLLKEALPHLQINCSHFTTI 308 (336)
T ss_dssp GGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TC-------HHHHHHHSTTSEESCCCSCCT
T ss_pred HHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HH-------HHHHHhhCcceEEecccCccc
Confidence 5566667777777777774 32222235666777777777777 322 11 2222 2355666778888877
Q ss_pred CCccccc
Q 036011 340 LPPVIGN 346 (977)
Q Consensus 340 ~p~~~~~ 346 (977)
.|+.++.
T Consensus 309 ~~~~~~~ 315 (336)
T 2ast_B 309 ARPTIGN 315 (336)
T ss_dssp TCSSCSS
T ss_pred cCCcccc
Confidence 7776654
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=7e-23 Score=216.97 Aligned_cols=180 Identities=24% Similarity=0.252 Sum_probs=90.4
Q ss_pred ccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeec
Q 036011 373 RSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNL 452 (977)
Q Consensus 373 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 452 (977)
.+.++++++++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 34555666666665 3444333 35555555555555554545555555555555555555544444555555555555
Q ss_pred CCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcccccc
Q 036011 453 GSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGP 532 (977)
Q Consensus 453 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 532 (977)
++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|+.+++|+.|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 55555544444445555555555555555544444444444555555555554433333444444444444444444444
Q ss_pred ccccccCccccCeeeccCCccCC
Q 036011 533 IPQTFGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 533 ~p~~~~~l~~L~~L~Ls~N~l~~ 555 (977)
.+..|..+++|+.|+|++|++++
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCT
T ss_pred CHHHHhCCCCCCEEEeeCCceeC
Confidence 44444444444444444444443
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.6e-24 Score=242.96 Aligned_cols=258 Identities=19% Similarity=0.186 Sum_probs=128.5
Q ss_pred EeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCC-CCceEEecCCCCCCCCCccccccccccc
Q 036011 274 LDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCR-NLTTLAVASNPLRGILPPVIGNFSASLQ 352 (977)
Q Consensus 274 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~~~~~L~ 352 (977)
+++++|.+++.+|..+...++|++|+|++|.++...+.. +...+..++ +|++|++++|.+.+..+..+..
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~---l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~------ 73 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVE---LIQAFANTPASVTSLNLSGNSLGFKNSDELVQ------ 73 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHH---HHHHHHTCCTTCCEEECCSSCGGGSCHHHHHH------
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHH---HHHHHHhCCCceeEEECcCCCCCHHHHHHHHH------
Confidence 455555555555554444444555555555555443211 112244444 5555555555554332222111
Q ss_pred ccccccCcccccCCcccccc-ccccEEEeecCccCCCCChhhhcc-----CCCCEEEeecccccCcccccccc-----cc
Q 036011 353 NFYAYDCKLTGNIPHEIGNL-RSLIVLSLFINALNGTIPSTVGRL-----EQLQGLSLYGNNLEGSIPYDLCH-----LE 421 (977)
Q Consensus 353 ~L~l~~n~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~-----l~ 421 (977)
.+... ++|++|+|++|.+++..+..+... ++|++|+|++|++++..+..+.. .+
T Consensus 74 ---------------~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 138 (362)
T 3goz_A 74 ---------------ILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPA 138 (362)
T ss_dssp ---------------HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCT
T ss_pred ---------------HHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCC
Confidence 11122 677777777777776666544443 67777777777776555444332 24
Q ss_pred ccceeeecCCccCCCc----hhhhcCCC-CCCeeecCCCcCCCCCCccccC----c-ccCceEEccCCCCCCC----Ccc
Q 036011 422 RLNGIRLNGNKLSGPI----PQCLASLI-SLRELNLGSNKFSSSIPSSFWS----L-EYLLAVNLSSNSLSGS----LPS 487 (977)
Q Consensus 422 ~L~~L~L~~N~l~~~~----p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~----l-~~L~~L~L~~N~l~~~----~p~ 487 (977)
+|++|+|++|++++.. +..+..++ +|++|+|++|++++..+..+.. . ++|+.|+|++|.|++. ++.
T Consensus 139 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 139 SITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 6666666666666422 33334444 6666666666666544443332 2 3555555555555532 223
Q ss_pred cccc-ccccCeeeCcCCcCCCCcch----hhhcccccceeccCCcccccc-------ccccccCccccCeeeccCCccCC
Q 036011 488 NIQN-LQVLINLDLSRNQLSGDIPI----TIGSLKDLVTLSLASNQFEGP-------IPQTFGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 488 ~~~~-l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~L~Ls~N~l~~ 555 (977)
.+.. .++|++|+|++|++++..+. .+..+++|+.|+|++|.+.+. ++..+..+++|+.|||++|++.+
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 3333 23555555555555533221 223344555555555553221 22234444445555555555443
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.5e-23 Score=217.62 Aligned_cols=203 Identities=17% Similarity=0.195 Sum_probs=148.9
Q ss_pred CCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcC-CCCCCCCcccCcCcccceeccc-cccccccCcccc
Q 036011 90 LPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNS-FTGPIPNSLFNLSRLEKWDSMF-NIIDGNIPSRIG 167 (977)
Q Consensus 90 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~l~~-n~i~~~~p~~~~ 167 (977)
+|. +. .+|++|+|++|++++..+..|+.+++|++|+|++|+ +++..+..|.++++|++|++++ |.+++..+..|+
T Consensus 26 ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~ 102 (239)
T 2xwt_C 26 IPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALK 102 (239)
T ss_dssp CCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEE
T ss_pred cCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhC
Confidence 555 33 378888888888885555578888888888888886 7755555666666666666666 666655555666
Q ss_pred CccccceeeeecccccccCCccccCCCCCc---eEEeecc-CCCCCCchhhccccceeEEEccCCcccccccCCCccccC
Q 036011 168 NLSSLVNVNLAYNNLQGEIPSEIGNLQNLE---ILVLGMN-NLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYS 243 (977)
Q Consensus 168 ~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~---~L~l~~N-~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 243 (977)
++++|++|++++|++++ +|. +..+++|+ +|++++| +++ .+++..+..
T Consensus 103 ~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~---------------------------~i~~~~~~~ 153 (239)
T 2xwt_C 103 ELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT---------------------------SIPVNAFQG 153 (239)
T ss_dssp CCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC---------------------------EECTTTTTT
T ss_pred CCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchh---------------------------hcCcccccc
Confidence 66666666666666663 444 55555555 5555555 444 455666778
Q ss_pred CCCce-EEEecCceeeecCCcccccccccceEeecccc-cccccccccccc-cccccccccccccCCCCCCchhhhhccc
Q 036011 244 LPNLR-VFSLGKNKLTGTIPNSITNASKLTGLDLSFNS-FSGLIPHTFGNL-RFLSVLNLANNYLTTDSPTAEWSFLSSL 320 (977)
Q Consensus 244 l~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~~l 320 (977)
+++|+ +|++++|+++ .+|......++|++|+|++|+ ++.+.+..|..+ ++|+.|++++|+++.+++.
T Consensus 154 l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--------- 223 (239)
T 2xwt_C 154 LCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--------- 223 (239)
T ss_dssp TBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---------
T ss_pred hhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---------
Confidence 89999 9999999999 455544344899999999995 998888899999 9999999999999987643
Q ss_pred ccCCCCceEEecCCC
Q 036011 321 TNCRNLTTLAVASNP 335 (977)
Q Consensus 321 ~~l~~L~~L~L~~N~ 335 (977)
.+++|+.|+++++.
T Consensus 224 -~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 224 -GLEHLKELIARNTW 237 (239)
T ss_dssp -TCTTCSEEECTTC-
T ss_pred -HhccCceeeccCcc
Confidence 46889999998874
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=4.2e-25 Score=250.24 Aligned_cols=214 Identities=22% Similarity=0.280 Sum_probs=173.7
Q ss_pred ccccccccEEEeecC---ccCCCCChh-------hhccCCCCEEEeecccccC----ccccccccccccceeeecCCccC
Q 036011 369 IGNLRSLIVLSLFIN---ALNGTIPST-------VGRLEQLQGLSLYGNNLEG----SIPYDLCHLERLNGIRLNGNKLS 434 (977)
Q Consensus 369 ~~~l~~L~~L~L~~N---~l~~~~p~~-------~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~ 434 (977)
+..+++|++|+|++| ++++.+|.. +..+++|++|+|++|.+++ .+|..+..+++|+.|+|++|.++
T Consensus 56 l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 344555555555553 233334443 4789999999999999997 47888999999999999999997
Q ss_pred CCchhhhc----CC---------CCCCeeecCCCcCC-CCCC---ccccCcccCceEEccCCCCC--C---CCccccccc
Q 036011 435 GPIPQCLA----SL---------ISLRELNLGSNKFS-SSIP---SSFWSLEYLLAVNLSSNSLS--G---SLPSNIQNL 492 (977)
Q Consensus 435 ~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~~---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l 492 (977)
...+..+. .+ ++|++|+|++|+++ +.++ ..+..+++|+.|+|++|+|+ | ..|..+..+
T Consensus 136 ~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 136 PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC 215 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC
Confidence 54444444 34 89999999999998 3444 46778899999999999998 2 344488899
Q ss_pred cccCeeeCcCCcCC----CCcchhhhcccccceeccCCcccccc----ccccc--cCccccCeeeccCCccCC----CCC
Q 036011 493 QVLINLDLSRNQLS----GDIPITIGSLKDLVTLSLASNQFEGP----IPQTF--GSLTGLESLDLSNNNLSG----EIP 558 (977)
Q Consensus 493 ~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p 558 (977)
++|++|+|++|+++ +.+|..+..+++|+.|+|++|++++. +|..+ +.+++|+.|+|++|++++ .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 99999999999996 57888999999999999999999976 56777 449999999999999997 488
Q ss_pred ccc-ccccccCccccCCCcccccCC
Q 036011 559 KSL-EALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 559 ~~~-~~l~~L~~L~l~~N~l~~~~p 582 (977)
..+ .++++|++|++++|++++..|
T Consensus 296 ~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHhcCCCceEEEccCCcCCcchh
Confidence 888 668999999999999987553
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=2.3e-23 Score=228.21 Aligned_cols=225 Identities=19% Similarity=0.184 Sum_probs=177.1
Q ss_pred cccEeeccCCcccccC-CC--CcCCCCCCCEEeCcCccCCCCCCccc--cccccCcEEeccCcCCCCCCC----CcccCc
Q 036011 75 FLMSLDISKNNFHAYL-PN--ELGQLRRLRFISLDYNEFSGSFPSWI--GVLSKLQILSLRNNSFTGPIP----NSLFNL 145 (977)
Q Consensus 75 ~L~~L~L~~n~l~~~~-p~--~~~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p----~~l~~l 145 (977)
.++.|.+.++.++... .. .+..+++|++|+|++|++++..|..+ +.+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4677888887765311 10 12245679999999999998888888 889999999999999987665 345678
Q ss_pred CcccceeccccccccccCccccCccccceeeeeccccccc--C--CccccCCCCCceEEeeccCCCCCCch----hhccc
Q 036011 146 SRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGE--I--PSEIGNLQNLEILVLGMNNLSGPIQP----SIFNI 217 (977)
Q Consensus 146 ~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~--~--p~~l~~l~~L~~L~l~~N~l~~~~~~----~l~~l 217 (977)
++|++|++++|.+.+..|..|+.+++|++|+|++|++.+. + +..++.+++|++|+|++|+++.. +. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHHhcC
Confidence 8999999999999888888999999999999999998652 2 23457889999999999999732 22 24677
Q ss_pred cceeEEEccCCcccccccCCCcccc--CCCCceEEEecCceeeecCCcccccccccceEeeccccccccccccccccccc
Q 036011 218 STITLINLFGNQLSGHLDLPPKVSY--SLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFL 295 (977)
Q Consensus 218 ~~L~~L~L~~N~l~~~~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 295 (977)
++|+.|+|++|++++. .|+.... .+++|++|+|++|+++ .+|..+. ++|++|+|++|+|+++ |. +..+++|
T Consensus 224 ~~L~~L~Ls~N~l~~~--~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L 296 (310)
T 4glp_A 224 VQPHSLDLSHNSLRAT--VNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEV 296 (310)
T ss_dssp CCCSSEECTTSCCCCC--CCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCC
T ss_pred CCCCEEECCCCCCCcc--chhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCc
Confidence 9999999999999853 1332221 2379999999999999 6788775 7999999999999976 33 7889999
Q ss_pred ccccccccccCC
Q 036011 296 SVLNLANNYLTT 307 (977)
Q Consensus 296 ~~L~L~~N~l~~ 307 (977)
+.|+|++|+++.
T Consensus 297 ~~L~L~~N~l~~ 308 (310)
T 4glp_A 297 DNLTLDGNPFLV 308 (310)
T ss_dssp SCEECSSTTTSC
T ss_pred cEEECcCCCCCC
Confidence 999999999875
No 344
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.2e-22 Score=221.81 Aligned_cols=173 Identities=25% Similarity=0.384 Sum_probs=116.6
Q ss_pred ccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCC
Q 036011 369 IGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLR 448 (977)
Q Consensus 369 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 448 (977)
+..+++|++|++++|.+++..+ +..+++|++|+|++|++++. + .+..+++|+.|++++|++++. +. +..+++|+
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~ 132 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQ 132 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCC
T ss_pred hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCC
Confidence 4455566666666666654333 66666777777777776642 2 566677777777777777643 32 67777777
Q ss_pred eeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcc
Q 036011 449 ELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQ 528 (977)
Q Consensus 449 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 528 (977)
+|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|+
T Consensus 133 ~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 133 VLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred EEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 77777777775433 6677777777777777775333 7777777777777777774332 6777778888888887
Q ss_pred ccccccccccCccccCeeeccCCccCC
Q 036011 529 FEGPIPQTFGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 529 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 555 (977)
+++.. .+..+++|+.|+|++|++++
T Consensus 207 l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred cCccc--cccCCCCCCEEEccCCeeec
Confidence 77544 27777788888888888774
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.8e-22 Score=220.49 Aligned_cols=196 Identities=26% Similarity=0.363 Sum_probs=174.0
Q ss_pred ccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCC
Q 036011 369 IGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLR 448 (977)
Q Consensus 369 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 448 (977)
+..+++|+.|++++|.++. ++ .+..+++|++|+|++|.+++..+ +..+++|+.|++++|++++. + .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 5578999999999999984 45 68999999999999999996554 99999999999999999864 3 699999999
Q ss_pred eeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcc
Q 036011 449 ELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQ 528 (977)
Q Consensus 449 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 528 (977)
+|++++|++++. + .+..+++|+.|++++|++++..+ +..+++|++|+|++|++++. +. +..+++|+.|+|++|+
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCc
Confidence 999999999964 3 38999999999999999996544 89999999999999999954 44 9999999999999999
Q ss_pred ccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCccccc
Q 036011 529 FEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGE 580 (977)
Q Consensus 529 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 580 (977)
+++..+ +..+++|+.|+|++|++++.. .+..+++|+.|++++|++++.
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 997544 899999999999999999654 389999999999999999873
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=5.6e-23 Score=240.62 Aligned_cols=215 Identities=22% Similarity=0.287 Sum_probs=157.8
Q ss_pred CCCCCCCCC-----cccce-EecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEE
Q 036011 30 NWSISQPIC-----KWVGI-SCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFI 103 (977)
Q Consensus 30 ~w~~~~~~c-----~w~gv-~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 103 (977)
+|..+.++| .|.|+ .|.. .+++.|+|+++++++ +|+.+. ++|++|+|++|+|+. +| ..+++|++|
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip---~~l~~L~~L 105 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP---ELPASLEYL 105 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC---CCCTTCCEE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc---cccCCCCEE
Confidence 576666777 79999 7864 368999999999985 888774 789999999999985 67 557899999
Q ss_pred eCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeeccccc
Q 036011 104 SLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQ 183 (977)
Q Consensus 104 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~ 183 (977)
+|++|+|++ +|. +.. +|++|+|++|.+++ +|. .+++|++|++++|.|++ +|. .+++|++|+|++|+|+
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLT 173 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCC
Confidence 999999985 777 665 89999999999986 565 56778888888887775 555 4567777777777777
Q ss_pred ccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCc
Q 036011 184 GEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPN 263 (977)
Q Consensus 184 ~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 263 (977)
+ +|. |+ ++|+.|+|++|+|+ .+|. +.. +| ....+.|+.|+|++|+|+ .+|.
T Consensus 174 ~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L--------------------~~~~~~L~~L~Ls~N~l~-~lp~ 224 (571)
T 3cvr_A 174 F-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN--------------------HHSEETEIFFRCRENRIT-HIPE 224 (571)
T ss_dssp C-CCC-CC--TTCCEEECCSSCCS-SCCC-CC------------------------------CCEEEECCSSCCC-CCCG
T ss_pred C-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh--------------------hcccccceEEecCCCcce-ecCH
Confidence 4 665 55 67777777777776 3332 221 11 111233478888888887 5777
Q ss_pred ccccccccceEeecccccccccccccccccc
Q 036011 264 SITNASKLTGLDLSFNSFSGLIPHTFGNLRF 294 (977)
Q Consensus 264 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 294 (977)
.+..+++|++|+|++|++++.+|..|..+..
T Consensus 225 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 225 NILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp GGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 7777888888888888888877777766543
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=3.6e-23 Score=229.82 Aligned_cols=250 Identities=22% Similarity=0.241 Sum_probs=193.9
Q ss_pred CceEEecCCCCCCCCCcccccc-cccccccccccCcccccCCccccccccccEEEeecCccCCC-CChhhhccCCCCEEE
Q 036011 326 LTTLAVASNPLRGILPPVIGNF-SASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGT-IPSTVGRLEQLQGLS 403 (977)
Q Consensus 326 L~~L~L~~N~l~~~~p~~~~~~-~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ 403 (977)
++.+++++|.+. +..+..+ ...++.+.+.+|.+.+..+. +..+++|++|++++|.+++. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 455555555443 2222222 13455566666666555444 45788999999999998865 788889999999999
Q ss_pred eecccccCccccccccccccceeeecCC-ccCCC-chhhhcCCCCCCeeecCCC-cCCCC-CCccccCcc-cCceEEccC
Q 036011 404 LYGNNLEGSIPYDLCHLERLNGIRLNGN-KLSGP-IPQCLASLISLRELNLGSN-KFSSS-IPSSFWSLE-YLLAVNLSS 478 (977)
Q Consensus 404 L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~L~~ 478 (977)
|++|.+++..+..+..+++|++|++++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|+.|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 9999998888888999999999999999 67753 6777888999999999999 88854 567788889 999999999
Q ss_pred C--CCC-CCCccccccccccCeeeCcCCc-CCCCcchhhhcccccceeccCCcc-ccccccccccCccccCeeeccCCcc
Q 036011 479 N--SLS-GSLPSNIQNLQVLINLDLSRNQ-LSGDIPITIGSLKDLVTLSLASNQ-FEGPIPQTFGSLTGLESLDLSNNNL 553 (977)
Q Consensus 479 N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l 553 (977)
| .++ +.+|..+..+++|++|++++|. +++..+..++.+++|+.|+|++|. +.......++++++|+.|+|++| +
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i 283 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-V 283 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-S
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-c
Confidence 9 455 4567778889999999999999 777788899999999999999995 33222236888999999999999 4
Q ss_pred CCCCCcccccc-cccCccccCCCcccccCCC
Q 036011 554 SGEIPKSLEAL-LFLKQLNVSHNKLEGEIPA 583 (977)
Q Consensus 554 ~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~ 583 (977)
+ ...+..+ ..+..|++++|++++..|.
T Consensus 284 ~---~~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 284 P---DGTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp C---TTCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred C---HHHHHHHHhhCcceEEecccCccccCC
Confidence 4 2345555 3488899999999998875
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=3.3e-22 Score=222.89 Aligned_cols=237 Identities=16% Similarity=0.089 Sum_probs=147.3
Q ss_pred EcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCc-cccccccCcE-EeccCcC
Q 036011 56 NLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPS-WIGVLSKLQI-LSLRNNS 133 (977)
Q Consensus 56 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~-L~L~~n~ 133 (977)
+.++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|. .|.++++|++ +.+++|+
T Consensus 15 ~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~ 91 (350)
T 4ay9_X 15 LCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 91 (350)
T ss_dssp EEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETT
T ss_pred EecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCc
Confidence 33556677 788766 46789999999999886666788899999999999988766654 5777877664 5666777
Q ss_pred CCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeec-ccccccCCccccCCC-CCceEEeeccCCCCCCc
Q 036011 134 FTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAY-NNLQGEIPSEIGNLQ-NLEILVLGMNNLSGPIQ 211 (977)
Q Consensus 134 l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~-n~i~~~~p~~l~~l~-~L~~L~l~~N~l~~~~~ 211 (977)
+++..|..|.++++|++|++++|.|....+..+....++..|++.+ +++....+..|..+. .++.|++++|+|+
T Consensus 92 l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~---- 167 (350)
T 4ay9_X 92 LLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ---- 167 (350)
T ss_dssp CCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC----
T ss_pred ccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc----
Confidence 8766666666676666666666666655555555555566666644 445533334454443 3555666666555
Q ss_pred hhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecC-ceeeecCCcccccccccceEeecccccccccccccc
Q 036011 212 PSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGK-NKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFG 290 (977)
Q Consensus 212 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 290 (977)
.+++.++ ...+|++|++++ |.++.+.+..|..+++|++|||++|+|+.+.+..|.
T Consensus 168 -----------------------~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~ 223 (350)
T 4ay9_X 168 -----------------------EIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 223 (350)
T ss_dssp -----------------------EECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT
T ss_pred -----------------------CCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc
Confidence 2333333 234455555543 444433334556666677777777777666555566
Q ss_pred cccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCC
Q 036011 291 NLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASN 334 (977)
Q Consensus 291 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N 334 (977)
++++|+.+++. .+..++ .+..+++|+.+++.++
T Consensus 224 ~L~~L~~l~~~--~l~~lP---------~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 224 NLKKLRARSTY--NLKKLP---------TLEKLVALMEASLTYP 256 (350)
T ss_dssp TCCEEECTTCT--TCCCCC---------CTTTCCSCCEEECSCH
T ss_pred cchHhhhccCC--CcCcCC---------CchhCcChhhCcCCCC
Confidence 66666655542 233333 2556677777776654
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=8.6e-22 Score=219.54 Aligned_cols=240 Identities=18% Similarity=0.165 Sum_probs=151.3
Q ss_pred cEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCC-ccccccccCcEEeccCcCCCCCCCC-cccCcCcccceecc
Q 036011 77 MSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFP-SWIGVLSKLQILSLRNNSFTGPIPN-SLFNLSRLEKWDSM 154 (977)
Q Consensus 77 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~l~ 154 (977)
++++.++++++. +|..+ .+++++|+|++|+|+ .+| .+|+++++|++|+|++|++.+.+|. .|.++++|++
T Consensus 12 ~~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~---- 83 (350)
T 4ay9_X 12 RVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHE---- 83 (350)
T ss_dssp TEEEEESTTCCS-CCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCE----
T ss_pred CEEEecCCCCCc-cCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhh----
Confidence 456777777776 56555 356777777777777 444 4567777777777777776554443 3444444433
Q ss_pred ccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccC-Cccccc
Q 036011 155 FNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFG-NQLSGH 233 (977)
Q Consensus 155 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~ 233 (977)
.+.+++|+++...|..|.++++|++|++++|+++...+..+....++..|++.+ |++.
T Consensus 84 -------------------~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-- 142 (350)
T 4ay9_X 84 -------------------IRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-- 142 (350)
T ss_dssp -------------------EEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC--
T ss_pred -------------------hhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc--
Confidence 233344555544444555555555555555555544444444444555555533 3343
Q ss_pred ccCCCccccCC-CCceEEEecCceeeecCCcccccccccceEeecc-cccccccccccccccccccccccccccCCCCCC
Q 036011 234 LDLPPKVSYSL-PNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSF-NSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPT 311 (977)
Q Consensus 234 ~~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 311 (977)
.++...+..+ ..+++|+|++|+|+. +|.......+|++|++++ |.++.+.++.|..+++|++|+|++|+|+.+++.
T Consensus 143 -~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~ 220 (350)
T 4ay9_X 143 -TIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSY 220 (350)
T ss_dssp -EECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSS
T ss_pred -cccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChh
Confidence 3455555555 468999999999995 555555678899999975 778877778899999999999999999998864
Q ss_pred chhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccC
Q 036011 312 AEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDC 359 (977)
Q Consensus 312 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n 359 (977)
. +.+|+.|.+.++.--..+|. +..+ .+|+.+++.++
T Consensus 221 ~----------~~~L~~L~~l~~~~l~~lP~-l~~l-~~L~~l~l~~~ 256 (350)
T 4ay9_X 221 G----------LENLKKLRARSTYNLKKLPT-LEKL-VALMEASLTYP 256 (350)
T ss_dssp S----------CTTCCEEECTTCTTCCCCCC-TTTC-CSCCEEECSCH
T ss_pred h----------hccchHhhhccCCCcCcCCC-chhC-cChhhCcCCCC
Confidence 3 44566666555544445553 3333 35777776553
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=6.9e-22 Score=202.91 Aligned_cols=157 Identities=18% Similarity=0.210 Sum_probs=99.8
Q ss_pred CCCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCC
Q 036011 35 QPICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSF 114 (977)
Q Consensus 35 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 114 (977)
.+.|+|.+|.|.. ++++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..
T Consensus 4 ~C~C~~~~v~c~~------------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (208)
T 2o6s_A 4 RCSCSGTTVECYS------------QGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLP 68 (208)
T ss_dssp TCEEETTEEECCS------------SCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCEECCCEEEecC------------CCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccC
Confidence 4458899988864 3344 455544 457888899888888866667888888888888888888555
Q ss_pred CccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCC
Q 036011 115 PSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQ 194 (977)
Q Consensus 115 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~ 194 (977)
+..++.+++|++|+|++|++++..+..|.++++|++|++++|.|++..+..|+++++|++|+|++|++++..+..+..++
T Consensus 69 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 148 (208)
T 2o6s_A 69 NGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLT 148 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred hhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCC
Confidence 55677888888888888888755544455555555555555555544444444555555555555555433333344444
Q ss_pred CCceEEeeccCC
Q 036011 195 NLEILVLGMNNL 206 (977)
Q Consensus 195 ~L~~L~l~~N~l 206 (977)
+|+.|++++|.+
T Consensus 149 ~L~~L~l~~N~~ 160 (208)
T 2o6s_A 149 SLQYIWLHDNPW 160 (208)
T ss_dssp TCCEEECCSCCB
T ss_pred CccEEEecCCCe
Confidence 444444444433
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=3.6e-22 Score=214.36 Aligned_cols=151 Identities=17% Similarity=0.123 Sum_probs=120.9
Q ss_pred HHHHhhcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccch------------------hhHHHHHHHHHHHHhcCC
Q 036011 677 DIQRATDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLD------------------RAFRSFDSECEVLRNVRH 738 (977)
Q Consensus 677 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h 738 (977)
.+......|.+.+.||+|+||.||+|+..+|+.||||+++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444556777899999999999999997799999999864321 13456889999999999
Q ss_pred CCcceEeeeeecCCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCC
Q 036011 739 RNLIKIFSSCCNNDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDE 818 (977)
Q Consensus 739 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~ 818 (977)
| +++.+++.. +..++||||++||+|.+ +.. .....++.|+++||+||| +.||+||||||+|||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-
Confidence 4 566665543 55699999999999998 422 224479999999999999 79999999999999999
Q ss_pred CCceEEeecccccccCCCCCcceeeccccCCcccCccccC
Q 036011 819 DMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGT 858 (977)
Q Consensus 819 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 858 (977)
++.+||+|||+|+. +..|+|||++.
T Consensus 228 ~~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 228 EEGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 99999999999863 33478898764
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=5.8e-21 Score=196.00 Aligned_cols=155 Identities=28% Similarity=0.254 Sum_probs=79.9
Q ss_pred ccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCc
Q 036011 422 RLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLS 501 (977)
Q Consensus 422 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 501 (977)
+|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 34444444444443333344444555555555555554444444455555555555555554444445555555555555
Q ss_pred CCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccC
Q 036011 502 RNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEI 581 (977)
Q Consensus 502 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 581 (977)
+|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++.+. ++.|+.|+++.|.++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCcee
Confidence 5555544444455555555555555555544444455555566666666655432 234555666666666666
Q ss_pred CC
Q 036011 582 PA 583 (977)
Q Consensus 582 p~ 583 (977)
|+
T Consensus 182 p~ 183 (208)
T 2o6s_A 182 RN 183 (208)
T ss_dssp BC
T ss_pred ec
Confidence 54
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=6.5e-21 Score=223.12 Aligned_cols=182 Identities=25% Similarity=0.331 Sum_probs=115.5
Q ss_pred cccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecC
Q 036011 374 SLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLG 453 (977)
Q Consensus 374 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 453 (977)
+|+.|+|++|.+++ +|..+ +++|++|+|++|+|+ .+| ..+++|+.|++++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 66667777776664 44444 256777777777766 445 345667777777777765 454 444 67777777
Q ss_pred CCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccc
Q 036011 454 SNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPI 533 (977)
Q Consensus 454 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 533 (977)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 777765 444 45667777777777764 444 45667777777777764 555 44 66777777777776 45
Q ss_pred cccccCcccc-------CeeeccCCccCCCCCcccccccccCccccCCCcccccCCC
Q 036011 534 PQTFGSLTGL-------ESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIPA 583 (977)
Q Consensus 534 p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 583 (977)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 55 443 55 77777777776 5666666677777777777777766653
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=7.6e-22 Score=240.04 Aligned_cols=233 Identities=20% Similarity=0.171 Sum_probs=136.3
Q ss_pred hHHHHHHHHHHHHhccCCCCCccCCCC-CCCCCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccE-----e
Q 036011 6 LTTDQFALLAFKAHVTDPQSVLANNWS-ISQPICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMS-----L 79 (977)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~w~-~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~-----L 79 (977)
.+.++++|+++..+...+.+...+.|. ..+..+.|.++++.. .+++.|+|.++++.. ++..+.....|.. +
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcccccCc
Confidence 456789999999888644433335674 445677999988865 579999999999984 5555433333333 2
Q ss_pred eccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccc
Q 036011 80 DISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIID 159 (977)
Q Consensus 80 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~ 159 (977)
+++.|.+. ..|+.+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|.++++|++|+|++|.|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 33334444 36888999999999999999999 89988889999999999999999 88999999999999999999999
Q ss_pred cccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccc-eeEEEccCCcccccccCCC
Q 036011 160 GNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNIST-ITLINLFGNQLSGHLDLPP 238 (977)
Q Consensus 160 ~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~~ 238 (977)
.+|..|+++++|++|+|++|.|+ .+|..|++|++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++. +|
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~--~p- 358 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIP--LP- 358 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCC--CC-
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCc--Cc-
Confidence 88999999999999999999998 78988999999999999999999988888776532 23467777777642 22
Q ss_pred ccccCCCCceEEEecCc
Q 036011 239 KVSYSLPNLRVFSLGKN 255 (977)
Q Consensus 239 ~~~~~l~~L~~L~L~~N 255 (977)
..|+.|+++.|
T Consensus 359 ------~~l~~l~l~~n 369 (727)
T 4b8c_D 359 ------HERRFIEINTD 369 (727)
T ss_dssp ------CC---------
T ss_pred ------cccceeEeecc
Confidence 34556666665
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=4.2e-20 Score=192.32 Aligned_cols=164 Identities=20% Similarity=0.198 Sum_probs=137.4
Q ss_pred CCCCCCCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccC
Q 036011 31 WSISQPICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEF 110 (977)
Q Consensus 31 w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 110 (977)
|..+++.|+|.+|.|.. +++. .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 12 ~~~~~~~Cs~~~v~c~~------------~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l 76 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRS------------KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL 76 (229)
T ss_dssp CCCTTCEEETTEEECTT------------SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCCCCEEeCCEeEccC------------CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCC
Confidence 44578899999999964 3344 6776554 8899999999999998899999999999999999999
Q ss_pred CCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccc
Q 036011 111 SGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEI 190 (977)
Q Consensus 111 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l 190 (977)
++..+..|+.+++|++|+|++|++++..+..|..+++|++|++++|.|+ .+|..+..+++|++|+|++|+|++..+..|
T Consensus 77 ~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~ 155 (229)
T 3e6j_A 77 GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAF 155 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTT
T ss_pred CCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHH
Confidence 8555567899999999999999999777777888889999999998888 778888888888888888888886666678
Q ss_pred cCCCCCceEEeeccCCCCCC
Q 036011 191 GNLQNLEILVLGMNNLSGPI 210 (977)
Q Consensus 191 ~~l~~L~~L~l~~N~l~~~~ 210 (977)
..+++|+.|++++|.+....
T Consensus 156 ~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 156 DRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTCTTCCEEECTTSCBCTTB
T ss_pred hCCCCCCEEEeeCCCccCCc
Confidence 88888888888888887543
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=6.5e-21 Score=197.08 Aligned_cols=155 Identities=23% Similarity=0.281 Sum_probs=108.3
Q ss_pred eeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCC-ccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCC
Q 036011 425 GIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIP-SSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRN 503 (977)
Q Consensus 425 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 503 (977)
.+++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 5555555555 3444332 245667777777665533 34666777777777777777666667777777777777777
Q ss_pred cCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCC
Q 036011 504 QLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 504 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 582 (977)
++++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|++++|+|++..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 7776666667777777777777777777777777777777778887777777777777777778888888888777665
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.1e-19 Score=196.63 Aligned_cols=173 Identities=25% Similarity=0.348 Sum_probs=117.0
Q ss_pred ccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCC
Q 036011 369 IGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLR 448 (977)
Q Consensus 369 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 448 (977)
+..+++|+.|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|+.|++++|++++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 34677777777777777643 3 36777777777777777775444 7777777777777777764 33 367777777
Q ss_pred eeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcc
Q 036011 449 ELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQ 528 (977)
Q Consensus 449 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 528 (977)
+|++++|++++. ..+..+++|+.|++++|++++. ..+..+++|++|+|++|++++..| +..+++|+.|+|++|+
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 777777777753 3566677777777777777653 456667777777777777764433 6667777777777777
Q ss_pred ccccccccccCccccCeeeccCCccCC
Q 036011 529 FEGPIPQTFGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 529 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 555 (977)
+++ +| .+..+++|+.|+|++|+++.
T Consensus 190 i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 764 33 36667777777777777664
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=3.8e-20 Score=207.00 Aligned_cols=176 Identities=26% Similarity=0.214 Sum_probs=93.9
Q ss_pred cEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccc-cccccceeeecCCccCCCchhhhcCCCCCCeeecCC
Q 036011 376 IVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLC-HLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGS 454 (977)
Q Consensus 376 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 454 (977)
+.+++++|.++ .+|..+. +.++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46677777776 3554433 3466666666666655555555 566666666666666655555566666666666666
Q ss_pred CcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhh---hcccccceeccCCccccc
Q 036011 455 NKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITI---GSLKDLVTLSLASNQFEG 531 (977)
Q Consensus 455 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 531 (977)
|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 66665555555555555555555555555445555555555555555555553222222 334444444444444443
Q ss_pred cccccccCccc--cCeeeccCCccC
Q 036011 532 PIPQTFGSLTG--LESLDLSNNNLS 554 (977)
Q Consensus 532 ~~p~~~~~l~~--L~~L~Ls~N~l~ 554 (977)
..+..|..++. |+.|+|++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 33334444433 244444444443
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.2e-19 Score=215.07 Aligned_cols=202 Identities=22% Similarity=0.285 Sum_probs=146.0
Q ss_pred cccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCC
Q 036011 352 QNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGN 431 (977)
Q Consensus 352 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 431 (977)
..+.+..+.+....+ +..+++|+.|++++|.+.. ++ .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|
T Consensus 24 ~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred HHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCC
Confidence 334444444443332 4567788888888888873 33 57888888888888888886554 778888888888888
Q ss_pred ccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcch
Q 036011 432 KLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPI 511 (977)
Q Consensus 432 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 511 (977)
++++ +| .+..+++|+.|+|++|+|.+. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++..|
T Consensus 98 ~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 98 KIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp CCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 8874 33 677888888888888888853 4577788888888888888754 567788888888888888886555
Q ss_pred hhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCc
Q 036011 512 TIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQ 569 (977)
Q Consensus 512 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 569 (977)
+..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++.....+..+..+..
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~~ 225 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPINHQSNLVVPNT 225 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECCCCCCCSSCEEECC
T ss_pred -hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCCcccccccEEeccc
Confidence 78888888888888888853 3 5788888888888888887544333444443333
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=7.7e-20 Score=188.99 Aligned_cols=135 Identities=23% Similarity=0.292 Sum_probs=76.5
Q ss_pred CCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccC
Q 036011 446 SLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLA 525 (977)
Q Consensus 446 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 525 (977)
+|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|+.|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 45555555555554444455555555555555555555445555555555555555555553333345555566666666
Q ss_pred CccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCccccc
Q 036011 526 SNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGE 580 (977)
Q Consensus 526 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 580 (977)
+|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|++++|+|.+.
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 6666655555566666666666666666655555555666666666666666553
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.7e-19 Score=195.08 Aligned_cols=191 Identities=27% Similarity=0.346 Sum_probs=163.5
Q ss_pred cccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecC
Q 036011 374 SLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLG 453 (977)
Q Consensus 374 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 453 (977)
++..+.+..+.+++. ..+..+++|++|++++|.++.. + .+..+++|+.|++++|++++..+ +..+++|++|+++
T Consensus 25 ~~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHHhcCCCcccc--cchhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 344444555555533 3356789999999999999844 4 58899999999999999997655 9999999999999
Q ss_pred CCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccc
Q 036011 454 SNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPI 533 (977)
Q Consensus 454 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 533 (977)
+|++++ ++ .+..+++|+.|++++|++++. ..+..+++|++|++++|++++. ..++.+++|+.|+|++|++++..
T Consensus 99 ~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 99 ENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp SSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccch
Confidence 999996 33 499999999999999999964 5789999999999999999954 67999999999999999999765
Q ss_pred cccccCccccCeeeccCCccCCCCCcccccccccCccccCCCccccc
Q 036011 534 PQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGE 580 (977)
Q Consensus 534 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 580 (977)
| +..+++|+.|+|++|++++ +| .+..+++|+.|++++|+++..
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred h--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 5 9999999999999999995 55 489999999999999999863
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3.8e-19 Score=183.79 Aligned_cols=151 Identities=22% Similarity=0.230 Sum_probs=121.9
Q ss_pred EEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcC
Q 036011 54 ALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNS 133 (977)
Q Consensus 54 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 133 (977)
.+++++++++ .+|..+. +.|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|+.+++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3566677777 6887765 789999999999999778899999999999999999997778999999999999999999
Q ss_pred CCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCC
Q 036011 134 FTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLS 207 (977)
Q Consensus 134 l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~ 207 (977)
+++..+..|.++++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 99655556677778888888777777777777777777777777777777665666777777777777777665
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=3.4e-19 Score=184.15 Aligned_cols=153 Identities=21% Similarity=0.201 Sum_probs=126.9
Q ss_pred EEEcCCCCCCccCCccccCcccccEeeccCCcccccCC-CCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCc
Q 036011 54 ALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLP-NELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNN 132 (977)
Q Consensus 54 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 132 (977)
.+++++++++ .+|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|++++..+..|+.+++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 5888888888 6887764 456899999999998655 45889999999999999999766778999999999999999
Q ss_pred CCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCC
Q 036011 133 SFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGP 209 (977)
Q Consensus 133 ~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~ 209 (977)
.+++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.+...
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99977777788888888888888888877788888888888888888888877777888888888888888877654
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=2.7e-19 Score=186.26 Aligned_cols=153 Identities=26% Similarity=0.306 Sum_probs=77.3
Q ss_pred CCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccC
Q 036011 399 LQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSS 478 (977)
Q Consensus 399 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 478 (977)
-+.++.++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345566666555 3443332 4555555555555555555555555555555555555544444445555555555555
Q ss_pred CCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCC
Q 036011 479 NSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 479 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 555 (977)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 5555444444455555555555555554 444444445555555555555544433444444445555555544443
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.1e-21 Score=231.06 Aligned_cols=207 Identities=19% Similarity=0.158 Sum_probs=134.9
Q ss_pred CCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcC-------------CCCCCCCcccCcCccccee-cccccccc
Q 036011 95 GQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNS-------------FTGPIPNSLFNLSRLEKWD-SMFNIIDG 160 (977)
Q Consensus 95 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-------------l~~~~p~~l~~l~~L~~L~-l~~n~i~~ 160 (977)
..+++|+.|+|++|+++ .+|..++.|++|+.|++++|. +.+..|..+.++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 55777778888888877 778888888888888876664 4556666677777777776 555543
Q ss_pred ccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCcc
Q 036011 161 NIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKV 240 (977)
Q Consensus 161 ~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 240 (977)
.+|+.+.+++|.|+.. |. ..|+.|+|++|+|++ +|. +..+++|+.|+|++|+|+ .+|. .
T Consensus 423 ---------~~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~---~lp~-~ 481 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR---ALPP-A 481 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC---CCCG-G
T ss_pred ---------chhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc---ccch-h
Confidence 2444555555555532 21 136666666666664 343 666666666666666666 3443 4
Q ss_pred ccCCCCceEEEecCceeeecCCcccccccccceEeeccccccccc-ccccccccccccccccccccCCCCCCchhhhhcc
Q 036011 241 SYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLI-PHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSS 319 (977)
Q Consensus 241 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 319 (977)
+..+++|++|+|++|+|++ +| .+..+++|++|+|++|+|++.. |..|+.+++|+.|+|++|++++.++.. ...
T Consensus 482 ~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~----~~l 555 (567)
T 1dce_A 482 LAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ----ERL 555 (567)
T ss_dssp GGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT----THH
T ss_pred hhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH----HHH
Confidence 4567777777777777774 45 6777777777777777777665 777777777777777777777765532 111
Q ss_pred cccCCCCceEEe
Q 036011 320 LTNCRNLTTLAV 331 (977)
Q Consensus 320 l~~l~~L~~L~L 331 (977)
+..+++|+.|++
T Consensus 556 ~~~lp~L~~L~l 567 (567)
T 1dce_A 556 AEMLPSVSSILT 567 (567)
T ss_dssp HHHCTTCSEEEC
T ss_pred HHHCcccCccCC
Confidence 344677777754
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=5.1e-19 Score=197.83 Aligned_cols=175 Identities=21% Similarity=0.161 Sum_probs=144.1
Q ss_pred EEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcC-CCCCCCEEeCcCccCCCCCCccccccccCcEEeccCc
Q 036011 54 ALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELG-QLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNN 132 (977)
Q Consensus 54 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 132 (977)
.+++++++++ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|+.+++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 5888999998 6888764 4689999999999998788887 9999999999999999777788999999999999999
Q ss_pred CCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccc---cCCCCCceEEeeccCCCCC
Q 036011 133 SFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEI---GNLQNLEILVLGMNNLSGP 209 (977)
Q Consensus 133 ~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l---~~l~~L~~L~l~~N~l~~~ 209 (977)
++++..+..|.++++|++|+|++|.|.+..|..|.++++|++|+|++|+|++..+..| ..+++|+.|+|++|+|+..
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9997777788999999999999999998888899999999999999999985433444 5688899999999988866
Q ss_pred Cchhhccccc--eeEEEccCCccc
Q 036011 210 IQPSIFNIST--ITLINLFGNQLS 231 (977)
Q Consensus 210 ~~~~l~~l~~--L~~L~L~~N~l~ 231 (977)
.+..+..+.. ++.|+|++|.+.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CHHHhhhccHhhcceEEecCCCcc
Confidence 6566666654 255666666554
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=4.2e-19 Score=210.36 Aligned_cols=160 Identities=29% Similarity=0.349 Sum_probs=95.2
Q ss_pred cccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCe
Q 036011 370 GNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRE 449 (977)
Q Consensus 370 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 449 (977)
..+++|+.|+|++|.+.+..| +..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|++++. ..+..+++|+.
T Consensus 62 ~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 135 (605)
T 1m9s_A 62 QYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLES 135 (605)
T ss_dssp GGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSE
T ss_pred ccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCE
Confidence 344444444444444443332 5555555666666665553 22 455666666666666666542 23666666777
Q ss_pred eecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccc
Q 036011 450 LNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQF 529 (977)
Q Consensus 450 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 529 (977)
|+|++|+|++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|++
T Consensus 136 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 136 LYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp EECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEEE
T ss_pred EECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCcC
Confidence 77777766644 456666777777777777765544 6677777777777777764 33 467777777777777777
Q ss_pred cccccccccCcc
Q 036011 530 EGPIPQTFGSLT 541 (977)
Q Consensus 530 ~~~~p~~~~~l~ 541 (977)
.+.....+..+.
T Consensus 210 ~~~p~~~~~~l~ 221 (605)
T 1m9s_A 210 LNKPINHQSNLV 221 (605)
T ss_dssp ECCCCCCCSSCE
T ss_pred cCCcccccccEE
Confidence 654333333333
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=3.8e-21 Score=226.54 Aligned_cols=187 Identities=21% Similarity=0.201 Sum_probs=118.0
Q ss_pred cCCccccccccccEEEeecCc-------------cCCCCChhhhccCCCCEEE-eecccccCccccccccccccceeeec
Q 036011 364 NIPHEIGNLRSLIVLSLFINA-------------LNGTIPSTVGRLEQLQGLS-LYGNNLEGSIPYDLCHLERLNGIRLN 429 (977)
Q Consensus 364 ~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~~p~~~~~l~~L~~L~L~ 429 (977)
.+|..++.+++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+. .|..+.++
T Consensus 363 ~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-----------~L~~l~l~ 431 (567)
T 1dce_A 363 VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-----------DLRSKFLL 431 (567)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-----------HHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-----------hhhhhhhh
Confidence 344445555555555544332 3334455555555555555 4444332 34444455
Q ss_pred CCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCc
Q 036011 430 GNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDI 509 (977)
Q Consensus 430 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 509 (977)
+|.++.. |. ..|+.|+|++|+|++ +|. |..+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +
T Consensus 432 ~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-l 501 (567)
T 1dce_A 432 ENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-V 501 (567)
T ss_dssp HHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred ccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-C
Confidence 5555422 21 147777888887775 455 777777777777777777 567777777777777777777774 5
Q ss_pred chhhhcccccceeccCCccccccc-cccccCccccCeeeccCCccCCCCCcc---cccccccCcccc
Q 036011 510 PITIGSLKDLVTLSLASNQFEGPI-PQTFGSLTGLESLDLSNNNLSGEIPKS---LEALLFLKQLNV 572 (977)
Q Consensus 510 p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~l 572 (977)
| .++.+++|+.|+|++|+|++.+ |..|+.+++|+.|+|++|+|++..|.. +..+++|+.||+
T Consensus 502 p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 502 D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 6 6777777777777777777665 777777777777777777777554422 234677777653
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=4.3e-19 Score=188.75 Aligned_cols=171 Identities=22% Similarity=0.316 Sum_probs=123.8
Q ss_pred ccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCee
Q 036011 371 NLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLREL 450 (977)
Q Consensus 371 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 450 (977)
.+.++..+++++|.+++ ++ .+..+++|++|++++|+++ .++ .+..+++|+.|++++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 45666677777777773 33 5777888888888888887 344 67778888888888888875544 7788888888
Q ss_pred ecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcccc
Q 036011 451 NLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFE 530 (977)
Q Consensus 451 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 530 (977)
+|++|++++. |... . ++|+.|++++|++++. ..+..+++|+.|+|++|++++ ++ .++.+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~l-~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCc
Confidence 8888888753 3322 2 7788888888887753 357777788888888888874 33 5777778888888888877
Q ss_pred ccccccccCccccCeeeccCCccCCC
Q 036011 531 GPIPQTFGSLTGLESLDLSNNNLSGE 556 (977)
Q Consensus 531 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ 556 (977)
+. ..+..+++|+.|+|++|++++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 55 5677777788888888877744
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=4.1e-19 Score=216.02 Aligned_cols=191 Identities=21% Similarity=0.213 Sum_probs=114.3
Q ss_pred eecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCC
Q 036011 380 LFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSS 459 (977)
Q Consensus 380 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 459 (977)
+..|.+. ..+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|..+++|++|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3344444 55677777788888888888887 66666678888888888888888 77788888888888888888888
Q ss_pred CCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccc-cceeccCCcccccccccccc
Q 036011 460 SIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKD-LVTLSLASNQFEGPIPQTFG 538 (977)
Q Consensus 460 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~ 538 (977)
.+|..|+++++|+.|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~-- 360 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE-- 360 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc--
Confidence 67888888888888888888887 56777888888888888888888888887766543 234788888888877764
Q ss_pred CccccCeeeccCC--------ccCCCCCcccccccccCccccCCCcccccC
Q 036011 539 SLTGLESLDLSNN--------NLSGEIPKSLEALLFLKQLNVSHNKLEGEI 581 (977)
Q Consensus 539 ~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 581 (977)
|+.|++++| .|.+..+..+..+..+....+++|-+.+..
T Consensus 361 ----l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~ 407 (727)
T 4b8c_D 361 ----RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHY 407 (727)
T ss_dssp ---------------------------------------------CCCGGG
T ss_pred ----cceeEeecccccccccCCccccccchhhcccccceeeeecccccccc
Confidence 455667766 344444444556666666777777665433
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=9.8e-19 Score=185.96 Aligned_cols=170 Identities=19% Similarity=0.256 Sum_probs=112.4
Q ss_pred CcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccce
Q 036011 72 NFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKW 151 (977)
Q Consensus 72 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 151 (977)
++.+++.+++++|.++.. + .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++..+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 456677777777777763 3 5677777777777777777 555 57777777777777777775433 6777777777
Q ss_pred eccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCccc
Q 036011 152 DSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLS 231 (977)
Q Consensus 152 ~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 231 (977)
++++|.+++ +|... . ++|++|+|++|++++ ++ .++++++|+.|++++|++++. +.+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCCcCc
Confidence 777777764 33322 2 677777777777774 33 577777777777777777753 25666666666666666665
Q ss_pred ccccCCCccccCCCCceEEEecCceeee
Q 036011 232 GHLDLPPKVSYSLPNLRVFSLGKNKLTG 259 (977)
Q Consensus 232 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 259 (977)
+. ..+..+++|+.|++++|++++
T Consensus 164 ~~-----~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 164 NT-----GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp BC-----TTSTTCCCCCEEEEEEEEEEC
T ss_pred ch-----HHhccCCCCCEEeCCCCcccC
Confidence 32 233455666666666666653
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.3e-18 Score=174.70 Aligned_cols=154 Identities=18% Similarity=0.262 Sum_probs=80.3
Q ss_pred hhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCc
Q 036011 393 VGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLL 472 (977)
Q Consensus 393 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 472 (977)
.+.+++|++|++++|.++ .+| .+..+++|+.|++++|.++. +..+..+++|++|++++|++++..+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~---------- 105 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKI---------- 105 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGS----------
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccC----------
Confidence 355666666666666666 333 45555555555555554431 2244455555555555555554444
Q ss_pred eEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCcc-ccccccccccCccccCeeeccCC
Q 036011 473 AVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQ-FEGPIPQTFGSLTGLESLDLSNN 551 (977)
Q Consensus 473 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N 551 (977)
..|..+++|++|+|++|++++..|..++.+++|+.|+|++|+ ++ .+| .+..+++|+.|+|++|
T Consensus 106 --------------~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 106 --------------PNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFD 169 (197)
T ss_dssp --------------CCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTB
T ss_pred --------------hhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCC
Confidence 444445555555555555554445555555555555555555 33 233 3555555555555555
Q ss_pred ccCCCCCcccccccccCccccCCCccc
Q 036011 552 NLSGEIPKSLEALLFLKQLNVSHNKLE 578 (977)
Q Consensus 552 ~l~~~~p~~~~~l~~L~~L~l~~N~l~ 578 (977)
++++ ++ .+..+++|+.|++++|++.
T Consensus 170 ~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 170 GVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 5553 22 4555555666666665553
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.7e-18 Score=174.31 Aligned_cols=155 Identities=17% Similarity=0.227 Sum_probs=120.4
Q ss_pred cccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCC
Q 036011 368 EIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISL 447 (977)
Q Consensus 368 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 447 (977)
....+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 4578899999999999999 566 7999999999999999876 34578999999999999999998788899999999
Q ss_pred CeeecCCCcCCCCCCccccCcccCceEEccCCC-CCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCC
Q 036011 448 RELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNS-LSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLAS 526 (977)
Q Consensus 448 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 526 (977)
++|++++|++++..|..+..+++|+.|++++|. ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 999999999997777777777777777777776 55 333 46666666666666666663 33 455555566666665
Q ss_pred cccc
Q 036011 527 NQFE 530 (977)
Q Consensus 527 N~l~ 530 (977)
|++.
T Consensus 191 N~i~ 194 (197)
T 4ezg_A 191 QTIG 194 (197)
T ss_dssp C---
T ss_pred cccC
Confidence 5554
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.2e-18 Score=175.94 Aligned_cols=131 Identities=26% Similarity=0.355 Sum_probs=79.3
Q ss_pred ceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCc-cccCcccCceEEccCCCCCCCCccccccccccCeeeCcC
Q 036011 424 NGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPS-SFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSR 502 (977)
Q Consensus 424 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 502 (977)
+.+++++|+++ .+|..+.. +|++|++++|+|++..+. .|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56667777765 45544432 666666666666654443 356666666666666666655566666666666666666
Q ss_pred CcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCC
Q 036011 503 NQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEI 557 (977)
Q Consensus 503 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 557 (977)
|+|++..|..|..+++|+.|+|++|+|++.+|..|..+++|+.|+|++|++++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 6666555555666666666666666666555666666666666666666665543
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=2.9e-18 Score=189.28 Aligned_cols=102 Identities=11% Similarity=0.016 Sum_probs=55.9
Q ss_pred ccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCc-eEEccCCCCCCCCccccccccccCee
Q 036011 420 LERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLL-AVNLSSNSLSGSLPSNIQNLQVLINL 498 (977)
Q Consensus 420 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L 498 (977)
+++|+.|+|++|+++.+.+.+|.++++|+.|+|.+| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++.+|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 445555555555555444445555555555555555 4444555555555555 555555 4444445556666666666
Q ss_pred eCcCCcCCCCcchhhhcccccceec
Q 036011 499 DLSRNQLSGDIPITIGSLKDLVTLS 523 (977)
Q Consensus 499 ~Ls~N~l~~~~p~~~~~l~~L~~L~ 523 (977)
++++|+++...+..|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 6666666544444566666665554
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=2.2e-18 Score=182.63 Aligned_cols=137 Identities=18% Similarity=0.252 Sum_probs=107.1
Q ss_pred CCcCccccCcceEEEEEEEe-CCCCE--EEEEEeeccchh------------------------hHHHHHHHHHHHHhcC
Q 036011 685 FNECNLLGRGSFGSVYKGTF-SDGTS--FAIKVFNLQLDR------------------------AFRSFDSECEVLRNVR 737 (977)
Q Consensus 685 ~~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~ 737 (977)
|.+.+.||+|+||.||+|+. .+|+. ||||+++..... ....+.+|++.+++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999997 68889 999997543211 1135789999999998
Q ss_pred CCCc--ceEeeeeecCCeeEEEEeccCC-C----CHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 036011 738 HRNL--IKIFSSCCNNDFRALVLELMPN-G----SLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLK 810 (977)
Q Consensus 738 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk 810 (977)
|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||+|||. +.||+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8764 333332 356899999942 3 67766533 2345677899999999999994 4789999999
Q ss_pred CCceeeCCCCceEEeeccccccc
Q 036011 811 PSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 811 ~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
|.|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999764
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1.4e-17 Score=167.97 Aligned_cols=132 Identities=25% Similarity=0.318 Sum_probs=74.2
Q ss_pred CeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCcc-ccccccccCeeeCcCCcCCCCcchhhhcccccceeccCC
Q 036011 448 RELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPS-NIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLAS 526 (977)
Q Consensus 448 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 526 (977)
+.+++++|+++ .+|..+.. +|+.|++++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45555555554 34443322 555566666665544332 255555666666666666555555555556666666666
Q ss_pred ccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccccCC
Q 036011 527 NQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 527 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 582 (977)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|++++|+|+|..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 66655555555555666666666666655555555555566666666666655544
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=2.1e-17 Score=182.27 Aligned_cols=102 Identities=16% Similarity=0.125 Sum_probs=72.7
Q ss_pred CCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccC-eeeCcCCcCCCCcchhhhccccccee
Q 036011 444 LISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLI-NLDLSRNQLSGDIPITIGSLKDLVTL 522 (977)
Q Consensus 444 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 522 (977)
+++|+.|+|++|+++.+.+..|.++++|+.|++.+| ++.+.+.+|.++.+|+ .|++.+ .++...+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 567777777777777666667777777777777776 6656666777777777 777776 5654445677777777777
Q ss_pred ccCCccccccccccccCccccCeee
Q 036011 523 SLASNQFEGPIPQTFGSLTGLESLD 547 (977)
Q Consensus 523 ~Ls~N~l~~~~p~~~~~l~~L~~L~ 547 (977)
++++|+++...+.+|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 7777777766666777777777765
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=6.5e-17 Score=163.08 Aligned_cols=111 Identities=26% Similarity=0.353 Sum_probs=61.9
Q ss_pred cCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeecc
Q 036011 470 YLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLS 549 (977)
Q Consensus 470 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 549 (977)
+|+.|++++|+|+ .+|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4455555555554 344555555555555555555554444455555555555555555555555556666666666666
Q ss_pred CCccCCCCCcccccccccCccccCCCcccccC
Q 036011 550 NNNLSGEIPKSLEALLFLKQLNVSHNKLEGEI 581 (977)
Q Consensus 550 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 581 (977)
+|+|++..+..|..+++|+.|++++|+|.+..
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 66665444444555666666666666665543
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=2.2e-16 Score=155.63 Aligned_cols=133 Identities=25% Similarity=0.263 Sum_probs=95.8
Q ss_pred CCCCeeecCCCcCC-CCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceec
Q 036011 445 ISLRELNLGSNKFS-SSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLS 523 (977)
Q Consensus 445 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 523 (977)
++|++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 55666677777777777777777754 6677777777777777777766777777777777777
Q ss_pred cCCccccccc-cccccCccccCeeeccCCccCCCCC---cccccccccCccccCCCcccc
Q 036011 524 LASNQFEGPI-PQTFGSLTGLESLDLSNNNLSGEIP---KSLEALLFLKQLNVSHNKLEG 579 (977)
Q Consensus 524 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~ 579 (977)
|++|++++.. +..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 7777777532 2667777888888888888775444 367777888888888877653
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.6e-16 Score=156.60 Aligned_cols=135 Identities=26% Similarity=0.243 Sum_probs=76.2
Q ss_pred ccceeeecCCccC-CCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeC
Q 036011 422 RLNGIRLNGNKLS-GPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDL 500 (977)
Q Consensus 422 ~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 500 (977)
+|+.|++++|+++ +.+|..+..+++|++|++++|++++. ..+..+++|+.|++++|++++.+|..+..+++|++|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3444444444443 33444444445555555555555533 44555555555555555555545555555666666666
Q ss_pred cCCcCCCCc-chhhhcccccceeccCCcccccccc---ccccCccccCeeeccCCccCCCCCc
Q 036011 501 SRNQLSGDI-PITIGSLKDLVTLSLASNQFEGPIP---QTFGSLTGLESLDLSNNNLSGEIPK 559 (977)
Q Consensus 501 s~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~ 559 (977)
++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+. .+|.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 666666321 1556666677777777777765443 36667777777777777765 4443
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=2.4e-16 Score=151.94 Aligned_cols=128 Identities=23% Similarity=0.274 Sum_probs=87.1
Q ss_pred CCCCeeecCCCcCC-CCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceec
Q 036011 445 ISLRELNLGSNKFS-SSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLS 523 (977)
Q Consensus 445 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 523 (977)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..++.+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666665 55566666666666666666666644 5566677777777777777755666666777777777
Q ss_pred cCCcccccc-ccccccCccccCeeeccCCccCCCCC---cccccccccCccccCC
Q 036011 524 LASNQFEGP-IPQTFGSLTGLESLDLSNNNLSGEIP---KSLEALLFLKQLNVSH 574 (977)
Q Consensus 524 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~ 574 (977)
+++|++++. .|..++.+++|+.|++++|++++..+ ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 777777753 34667777777777777777775544 4677777777777753
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1e-15 Score=152.28 Aligned_cols=133 Identities=22% Similarity=0.266 Sum_probs=81.8
Q ss_pred CCCcccceEecCCCCcEEEEEcCCCCCCccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCC
Q 036011 36 PICKWVGISCGARHQRVRALNLSNMGLRGTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFP 115 (977)
Q Consensus 36 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 115 (977)
+.|+|.++.|. +++++ .+|..+ .+.|++|+|++|++++..+..|..+++|++|+|++|++++..+
T Consensus 5 C~C~~~~l~~~------------~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 5 CSCSGTEIRCN------------SKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp CEEETTEEECC------------SSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEeCCCEEEec------------CCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 34677766664 34555 456544 3678888888888887666677888888888888888875555
Q ss_pred ccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeeccccc
Q 036011 116 SWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQ 183 (977)
Q Consensus 116 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~ 183 (977)
..++.+++|++|+|++|++++..+..+.++++|++|++++|.+++..+..+..+++|++|+|++|.+.
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 56677788888888888777554444444444444444444444333333333444444444444443
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=6.1e-16 Score=153.91 Aligned_cols=129 Identities=28% Similarity=0.292 Sum_probs=62.6
Q ss_pred ceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCC
Q 036011 424 NGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRN 503 (977)
Q Consensus 424 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 503 (977)
+.+++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|+|++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 45556666655 2333222 35555555555555444444555555555555555555444444445555555555555
Q ss_pred cCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCC
Q 036011 504 QLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 504 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 555 (977)
++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 5543333334444444444444444443333334444444444444444443
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=5e-16 Score=149.67 Aligned_cols=128 Identities=21% Similarity=0.222 Sum_probs=92.6
Q ss_pred cccceeeecCCccC-CCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeee
Q 036011 421 ERLNGIRLNGNKLS-GPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLD 499 (977)
Q Consensus 421 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 499 (977)
++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|+.|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666666666665 55666666677777777777777754 5667777777777777777766777777778888888
Q ss_pred CcCCcCCCC-cchhhhcccccceeccCCcccccccc---ccccCccccCeeeccC
Q 036011 500 LSRNQLSGD-IPITIGSLKDLVTLSLASNQFEGPIP---QTFGSLTGLESLDLSN 550 (977)
Q Consensus 500 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 550 (977)
+++|++++. .+..++.+++|+.|++++|++++..+ ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888742 23677888888888888888886555 4677888888888764
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.9e-15 Score=152.24 Aligned_cols=108 Identities=23% Similarity=0.275 Sum_probs=55.5
Q ss_pred CCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeee
Q 036011 99 RLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLA 178 (977)
Q Consensus 99 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~ 178 (977)
+|++|+|++|+++ .+|..|+.+++|++|+|++|.+++..+..|.++++|++|+|++|.|++..|..|+++++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3444444444444 344444444444444444444444434444444444444444444444444455556666666666
Q ss_pred cccccccCCccccCCCCCceEEeeccCCC
Q 036011 179 YNNLQGEIPSEIGNLQNLEILVLGMNNLS 207 (977)
Q Consensus 179 ~n~i~~~~p~~l~~l~~L~~L~l~~N~l~ 207 (977)
+|+|+...+..|..+++|+.|+|++|.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 66666444445666666666666666554
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=1.8e-16 Score=173.65 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=102.8
Q ss_pred cCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccch--------------hhH--------HHHHHHHHHHHhcCCCC
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLD--------------RAF--------RSFDSECEVLRNVRHRN 740 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--------------~~~--------~~~~~e~~~l~~l~h~n 740 (977)
.-|++.+.||+|+||.||+|...+|+.||||+++.... ... ....+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34889999999999999999998999999998753210 000 11245677777775554
Q ss_pred cceEeeeeecCCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCC
Q 036011 741 LIKIFSSCCNNDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDM 820 (977)
Q Consensus 741 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~ 820 (977)
+....-+... ..++||||++|++|.++... .....++.|++.+|.||| +.|||||||||.|||+++++
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEE
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCC
Confidence 4322212111 23699999999998765422 234568899999999999 78999999999999998776
Q ss_pred ----------ceEEeecccccccC
Q 036011 821 ----------VAHVSDFGLSKLFD 834 (977)
Q Consensus 821 ----------~~kl~Dfgla~~~~ 834 (977)
.+.|+||+.+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 38999999886543
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=3e-17 Score=166.64 Aligned_cols=135 Identities=24% Similarity=0.287 Sum_probs=105.9
Q ss_pred hhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhccc
Q 036011 438 PQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLK 517 (977)
Q Consensus 438 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 517 (977)
|..+..+++|++|+|++|++++ +| .+..+++|+.|++++|+++ .+|..+..+++|++|+|++|++++ +| .++.++
T Consensus 41 ~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~ 115 (198)
T 1ds9_A 41 DATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLV 115 (198)
T ss_dssp HHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHH
T ss_pred hHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCC
Confidence 3477888888888888888885 55 7788888888888888888 567777778888888888888884 55 688888
Q ss_pred ccceeccCCcccccccc-ccccCccccCeeeccCCccCCCCCcc----------cccccccCccccCCCcccc
Q 036011 518 DLVTLSLASNQFEGPIP-QTFGSLTGLESLDLSNNNLSGEIPKS----------LEALLFLKQLNVSHNKLEG 579 (977)
Q Consensus 518 ~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------~~~l~~L~~L~l~~N~l~~ 579 (977)
+|+.|+|++|++++..+ ..+..+++|+.|++++|++++.+|.. +..+++|+.|| +|+++.
T Consensus 116 ~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred CCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 88888888888885432 46888888888888888887665543 77888888886 676653
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=1e-14 Score=164.20 Aligned_cols=88 Identities=10% Similarity=0.152 Sum_probs=40.2
Q ss_pred ccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCccccccc
Q 036011 486 PSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALL 565 (977)
Q Consensus 486 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 565 (977)
+.+|.++.+|+.++|. |.++......|.++.+|+.++|..| ++.+.+.+|.++ +|+.|++++|.+....+..|..++
T Consensus 293 ~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~ 369 (401)
T 4fdw_A 293 PYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFP 369 (401)
T ss_dssp TTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSC
T ss_pred HHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCC
Confidence 3444444555555554 2243233334555555555555333 443344455555 555555555554433334444442
Q ss_pred -ccCccccCCCc
Q 036011 566 -FLKQLNVSHNK 576 (977)
Q Consensus 566 -~L~~L~l~~N~ 576 (977)
.++.|++..|.
T Consensus 370 ~~l~~l~vp~~~ 381 (401)
T 4fdw_A 370 DDITVIRVPAES 381 (401)
T ss_dssp TTCCEEEECGGG
T ss_pred CCccEEEeCHHH
Confidence 34445444443
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=2.4e-14 Score=161.12 Aligned_cols=249 Identities=14% Similarity=0.115 Sum_probs=163.3
Q ss_pred cccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCCCCCCccccccccCcEEeccCcCCCCCCCCcccCcCccccee
Q 036011 73 FSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFSGSFPSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWD 152 (977)
Q Consensus 73 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 152 (977)
+..++.+.+.+ .++.+-..+|.++ +|+.+.|..| ++..-..+|.++ +|+.+.|.. .++...+..|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35566666653 4555555667764 6888887766 553334456663 577787775 56655566777777788888
Q ss_pred ccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccc
Q 036011 153 SMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSG 232 (977)
Q Consensus 153 l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 232 (977)
+..|.++......|. ..+|+.+.|..+ ++.....+|.++++|+.+++..| ++.....+|.+ .+|+.+.+.+ .++
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~- 260 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVT- 260 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET-TCC-
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC-Ccc-
Confidence 777777755555555 477777777744 66455567777788888887764 45444445555 6777777743 343
Q ss_pred cccCCCccccCCCCceEEEecCceee-----ecCCcccccccccceEeecccccccccccccccccccccccccccccCC
Q 036011 233 HLDLPPKVSYSLPNLRVFSLGKNKLT-----GTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTT 307 (977)
Q Consensus 233 ~~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (977)
.++..+|..+++|+.+.+.+|.+. .+.+..|..+.+|+.++|. +.++.+...+|.++.+|+.+.+..| ++.
T Consensus 261 --~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~ 336 (401)
T 4fdw_A 261 --NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQ 336 (401)
T ss_dssp --EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCE
T ss_pred --EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccE
Confidence 466777777777777777777664 3556677777777777777 4466677777777777777777544 555
Q ss_pred CCCCchhhhhcccccCCCCceEEecCCCCCCCCCccc
Q 036011 308 DSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVI 344 (977)
Q Consensus 308 ~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 344 (977)
+...+ |.++ +|+.+++.+|.+....+..+
T Consensus 337 I~~~a-------F~~~-~L~~l~l~~n~~~~l~~~~F 365 (401)
T 4fdw_A 337 INFSA-------FNNT-GIKEVKVEGTTPPQVFEKVW 365 (401)
T ss_dssp ECTTS-------SSSS-CCCEEEECCSSCCBCCCSSC
T ss_pred EcHHh-------CCCC-CCCEEEEcCCCCcccccccc
Confidence 55543 6677 77777777776654433333
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.57 E-value=4e-14 Score=160.12 Aligned_cols=67 Identities=9% Similarity=-0.045 Sum_probs=32.1
Q ss_pred CCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEee
Q 036011 134 FTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLG 202 (977)
Q Consensus 134 l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~ 202 (977)
++......|.++++|+.+.+..+ ++......|.++++|+.+++.++ ++.....+|.++++|+.+.+.
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p 125 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLP 125 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhccc
Confidence 33333445555566666655432 44333445555555555555433 332333445555555554443
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=4.8e-14 Score=159.50 Aligned_cols=330 Identities=13% Similarity=0.037 Sum_probs=154.0
Q ss_pred CccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCC
Q 036011 115 PSWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQ 194 (977)
Q Consensus 115 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~ 194 (977)
..+|.++++|+.+.|..+ ++......|.++++|+.+++..+ ++......|.++.+|+.+.+..+ +......+|.++.
T Consensus 64 ~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 345677777777777643 55455566777777777777654 44344556777777777665543 3323344555543
Q ss_pred CCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceE
Q 036011 195 NLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGL 274 (977)
Q Consensus 195 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 274 (977)
.++...... .. .+...+|..+.+|+.+.+..+..+ +....|.++.+|+.+
T Consensus 141 ~~~~~~~~~--~~---------------------------~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i 190 (394)
T 4fs7_A 141 FKEITIPEG--VT---------------------------VIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSI 190 (394)
T ss_dssp CSEEECCTT--CC---------------------------EECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBC
T ss_pred ccccccCcc--cc---------------------------ccchhhhcccCCCcEEecCCccce-eccccccCCCCceEE
Confidence 322221111 11 112233333444444444333222 333344444455555
Q ss_pred eecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCccccccccccccc
Q 036011 275 DLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNF 354 (977)
Q Consensus 275 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L 354 (977)
++..| ++.+...+|.+...|+.+.+..+...- .. ......+
T Consensus 191 ~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i-~~--------~~~~~~~----------------------------- 231 (394)
T 4fs7_A 191 KLPRN-LKIIRDYCFAECILLENMEFPNSLYYL-GD--------FALSKTG----------------------------- 231 (394)
T ss_dssp CCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEE-CT--------TTTTTCC-----------------------------
T ss_pred EcCCC-ceEeCchhhccccccceeecCCCceEe-eh--------hhcccCC-----------------------------
Confidence 54443 333334444444444444443332110 00 0111122
Q ss_pred ccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccC
Q 036011 355 YAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLS 434 (977)
Q Consensus 355 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 434 (977)
|+.+.+..+ ++.....+|..+..|+.+.+..+... .....|..+..++.+....+.+
T Consensus 232 --------------------l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i- 288 (394)
T 4fs7_A 232 --------------------VKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV- 288 (394)
T ss_dssp --------------------CCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE-
T ss_pred --------------------CceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee-
Confidence 233333211 11122333444444444444444332 3334444445555444444332
Q ss_pred CCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhh
Q 036011 435 GPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIG 514 (977)
Q Consensus 435 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 514 (977)
...+|..+.+|+.+.+.++ ++.+...+|.++++|+.+++.++ ++.+...+|.++.+|+.+++..| ++..-..+|.
T Consensus 289 --~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 363 (394)
T 4fs7_A 289 --PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQ 363 (394)
T ss_dssp --CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBT
T ss_pred --ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhh
Confidence 1234445555555555443 34344455555555555555433 44344455666666666666554 4433344566
Q ss_pred cccccceeccCCccccccccccccCccccCee
Q 036011 515 SLKDLVTLSLASNQFEGPIPQTFGSLTGLESL 546 (977)
Q Consensus 515 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 546 (977)
++.+|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 364 ~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 364 GCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 6666666666543 22 234556666666543
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=3.8e-15 Score=147.96 Aligned_cols=131 Identities=21% Similarity=0.210 Sum_probs=75.6
Q ss_pred cCCCCCCeeecCCCcCCCCCCccccCcc-cCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccc
Q 036011 442 ASLISLRELNLGSNKFSSSIPSSFWSLE-YLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLV 520 (977)
Q Consensus 442 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 520 (977)
..+.+|++|++++|+++. +|. +..+. +|+.|++++|.|++. ..|..+++|++|+|++|++++..+..++.+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 344455555555555552 232 23332 555555555555542 4555666666666666666643333446666666
Q ss_pred eeccCCccccccccc--cccCccccCeeeccCCccCCCCCcc----cccccccCccccCCCccc
Q 036011 521 TLSLASNQFEGPIPQ--TFGSLTGLESLDLSNNNLSGEIPKS----LEALLFLKQLNVSHNKLE 578 (977)
Q Consensus 521 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 578 (977)
.|+|++|+|+ .+|. .+..+++|+.|+|++|+++ .+|.. +..+++|+.||+++|...
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666666665 3444 5666667777777777766 44543 666777777777777654
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=1.3e-16 Score=161.99 Aligned_cols=155 Identities=24% Similarity=0.257 Sum_probs=108.0
Q ss_pred hccCCCCEEEeecccccCcccc------ccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccC
Q 036011 394 GRLEQLQGLSLYGNNLEGSIPY------DLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWS 467 (977)
Q Consensus 394 ~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 467 (977)
.....++.++++.+.+++.+|. .+..+++|++|++++|++++ +| .+..+++|++|++++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3344444445555555444443 56666666666666666664 44 6666777777777777777 45666667
Q ss_pred cccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcc-hhhhcccccceeccCCcccccccccc----------
Q 036011 468 LEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIP-ITIGSLKDLVTLSLASNQFEGPIPQT---------- 536 (977)
Q Consensus 468 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~---------- 536 (977)
+++|+.|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|+.|++++|++++.+|..
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 169 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHH
Confidence 7788888888888875 44 57888888888888888874222 36888888999999999888766653
Q ss_pred ccCccccCeeeccCCccCC
Q 036011 537 FGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 537 ~~~l~~L~~L~Ls~N~l~~ 555 (977)
+..+++|+.|| +|.++.
T Consensus 170 ~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHCSSCSEEC--CGGGTT
T ss_pred HHhCCCcEEEC--CcccCH
Confidence 78889999887 777763
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=5.4e-15 Score=146.83 Aligned_cols=133 Identities=21% Similarity=0.213 Sum_probs=87.7
Q ss_pred cccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccC
Q 036011 417 LCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLI 496 (977)
Q Consensus 417 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 496 (977)
+..+.+|+.|++++|+++. +|......++|++|++++|+|++. ..|..+++|+.|++++|+|++..+..|..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 4445556666666666653 333222223677777777777654 4566677777777777777754444457777777
Q ss_pred eeeCcCCcCCCCcch--hhhcccccceeccCCcccccccccc----ccCccccCeeeccCCccC
Q 036011 497 NLDLSRNQLSGDIPI--TIGSLKDLVTLSLASNQFEGPIPQT----FGSLTGLESLDLSNNNLS 554 (977)
Q Consensus 497 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 554 (977)
+|+|++|+++ .+|. .+..+++|+.|++++|+++ .+|.. ++.+++|+.||+++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777777775 5555 6777777888888888877 34553 777788888888888765
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=4.9e-14 Score=138.75 Aligned_cols=106 Identities=25% Similarity=0.266 Sum_probs=59.5
Q ss_pred CCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCC
Q 036011 447 LRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLAS 526 (977)
Q Consensus 447 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 526 (977)
.+.+++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4566666666663 444332 5556666666666655555555556666666666665544444455555555555555
Q ss_pred ccccccccccccCccccCeeeccCCccCC
Q 036011 527 NQFEGPIPQTFGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 527 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 555 (977)
|+|++..+..|..+++|+.|+|++|++++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 55555444455555555555555555553
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=1.2e-13 Score=136.39 Aligned_cols=104 Identities=21% Similarity=0.244 Sum_probs=64.0
Q ss_pred CeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCc
Q 036011 448 RELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASN 527 (977)
Q Consensus 448 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 527 (977)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56677777776 4554443 56666666666666655666666666666666666666444444566666666666666
Q ss_pred cccccccccccCccccCeeeccCCccC
Q 036011 528 QFEGPIPQTFGSLTGLESLDLSNNNLS 554 (977)
Q Consensus 528 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 554 (977)
+|++..+..|..+++|+.|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666544444666666666666666665
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=2.3e-13 Score=133.97 Aligned_cols=109 Identities=26% Similarity=0.276 Sum_probs=73.1
Q ss_pred CceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccC
Q 036011 471 LLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSN 550 (977)
Q Consensus 471 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 550 (977)
.+.+++++|.++. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4566777777763 454442 5667777777777766666677777777777777777766666666777777777777
Q ss_pred CccCCCCCcccccccccCccccCCCcccccCC
Q 036011 551 NNLSGEIPKSLEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 551 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 582 (977)
|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 77775555556677777777777777766654
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=2.9e-13 Score=133.66 Aligned_cols=108 Identities=27% Similarity=0.293 Sum_probs=60.7
Q ss_pred ceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCC
Q 036011 472 LAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNN 551 (977)
Q Consensus 472 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 551 (977)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+.+++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45556666655 3444443 55566666666666555555666666666666666666544444555666666666666
Q ss_pred ccCCCCCcccccccccCccccCCCcccccCC
Q 036011 552 NLSGEIPKSLEALLFLKQLNVSHNKLEGEIP 582 (977)
Q Consensus 552 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 582 (977)
+|++..+..|..+++|++|+|++|+|.+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 6654433345556666666666666655443
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.36 E-value=1.4e-11 Score=139.23 Aligned_cols=308 Identities=10% Similarity=0.129 Sum_probs=127.1
Q ss_pred CccccCCCCCceEEeeccC---CCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCc
Q 036011 187 PSEIGNLQNLEILVLGMNN---LSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPN 263 (977)
Q Consensus 187 p~~l~~l~~L~~L~l~~N~---l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 263 (977)
..+|.++++|+.+.++.|. ++.....+|.++.+|+.+.+..+ ++ .++..+|..+.+|+.+.+..+.-. +...
T Consensus 80 ~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~---~I~~~aF~~c~~L~~i~lp~~~~~-I~~~ 154 (394)
T 4gt6_A 80 SNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT---EIDSEAFHHCEELDTVTIPEGVTS-VADG 154 (394)
T ss_dssp TTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS---EECTTTTTTCTTCCEEECCTTCCE-ECTT
T ss_pred HHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc---eehhhhhhhhcccccccccceeee-eccc
Confidence 3445555555555554442 33233344444555554444433 11 344555555566666666543322 4445
Q ss_pred ccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcc
Q 036011 264 SITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPV 343 (977)
Q Consensus 264 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~ 343 (977)
.|..+.+|+.+.+..+ ++.+...+|.. ..|+.+.+..+-. .+... .+..+.+++......+...... ..
T Consensus 155 ~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~-~i~~~-------af~~c~~l~~~~~~~~~~~~~~-~~ 223 (394)
T 4gt6_A 155 MFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT-RIGTN-------AFSECFALSTITSDSESYPAID-NV 223 (394)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC-EECTT-------TTTTCTTCCEEEECCSSSCBSS-SC
T ss_pred ceecccccccccccce-eeEeccccccc-cceeEEEECCccc-ccccc-------hhhhccccceeccccccccccc-ce
Confidence 5566666666666543 33344444543 3455555543321 11111 2555566666555544332110 00
Q ss_pred cccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCcccccccccccc
Q 036011 344 IGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERL 423 (977)
Q Consensus 344 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 423 (977)
+.. .+.........+.....+..+.+. +.++.....+|.++.+|+.+.+.++..+ +..
T Consensus 224 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~--------- 281 (394)
T 4gt6_A 224 LYE-----------KSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGT--------- 281 (394)
T ss_dssp EEE-----------ECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECT---------
T ss_pred eec-----------ccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecC---------
Confidence 000 000000000001111122222221 1122223344555555555555433322 233
Q ss_pred ceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCC
Q 036011 424 NGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRN 503 (977)
Q Consensus 424 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 503 (977)
.+|.++++|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+
T Consensus 282 ---------------~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 282 ---------------GAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp ---------------TTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred ---------------cccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 344444444444443 2233333444555555555555432 33333445555555555555433
Q ss_pred cCCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCcc
Q 036011 504 QLSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNL 553 (977)
Q Consensus 504 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 553 (977)
++..-..+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 345 -v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 345 -VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp -CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred -cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 432334455566666666665554331 3455555666666655543
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=2.7e-14 Score=159.18 Aligned_cols=87 Identities=22% Similarity=0.266 Sum_probs=43.0
Q ss_pred ccCceEEccCCCCCC----CCccccccccccCeeeCcCCcCCCC----cchhhhcccccceeccCCcccccc----cccc
Q 036011 469 EYLLAVNLSSNSLSG----SLPSNIQNLQVLINLDLSRNQLSGD----IPITIGSLKDLVTLSLASNQFEGP----IPQT 536 (977)
Q Consensus 469 ~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 536 (977)
++|+.|+|++|.|+. .++..+..+++|++|+|++|+|+.. ++..+...++|+.|+|++|.|++. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 344444444444432 1223334455555566666655431 133444555666666666666532 2233
Q ss_pred ccCccccCeeeccCCccCC
Q 036011 537 FGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 537 ~~~l~~L~~L~Ls~N~l~~ 555 (977)
+...++|++|||++|+|+.
T Consensus 235 L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHCSSCCEEECTTSSCCH
T ss_pred HHhCCCCCEEeccCCCCCH
Confidence 3344566666666666653
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.32 E-value=2.5e-11 Score=137.09 Aligned_cols=335 Identities=11% Similarity=0.088 Sum_probs=177.6
Q ss_pred CCccccCCC-CCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcc
Q 036011 186 IPSEIGNLQ-NLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNS 264 (977)
Q Consensus 186 ~p~~l~~l~-~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 264 (977)
...+|.++. .|+.+.+..+ ++.+...+|.++.+|+.+.+..|.-.....+...+|..+.+|+.+.+..+ ++.+-...
T Consensus 55 g~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~a 132 (394)
T 4gt6_A 55 GDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEA 132 (394)
T ss_dssp CTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTT
T ss_pred CHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhh
Confidence 345676664 5777777644 55455556666666666666665422222445555555555555554433 22233444
Q ss_pred cccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCccc
Q 036011 265 ITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVI 344 (977)
Q Consensus 265 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 344 (977)
|..+.+|+.+.+..+ +..+....|.....|+.+.+.++ ++.+...+ |. ..+|+.+.+..+..
T Consensus 133 F~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~a-------F~-~~~l~~i~ip~~~~-------- 194 (394)
T 4gt6_A 133 FHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERA-------FT-GTALTQIHIPAKVT-------- 194 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTT-------TT-TCCCSEEEECTTCC--------
T ss_pred hhhhcccccccccce-eeeecccceecccccccccccce-eeEecccc-------cc-ccceeEEEECCccc--------
Confidence 555555555555432 22233444444555555544332 22222211 11 12233333322110
Q ss_pred ccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccc
Q 036011 345 GNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLN 424 (977)
Q Consensus 345 ~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 424 (977)
..-...|..+.++.......+... .....+.. .+.........+.....+.
T Consensus 195 ------------------~i~~~af~~c~~l~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 245 (394)
T 4gt6_A 195 ------------------RIGTNAFSECFALSTITSDSESYP-AIDNVLYE----------KSANGDYALIRYPSQREDP 245 (394)
T ss_dssp ------------------EECTTTTTTCTTCCEEEECCSSSC-BSSSCEEE----------ECTTSCEEEEECCTTCCCS
T ss_pred ------------------ccccchhhhccccceecccccccc-cccceeec----------ccccccccccccccccccc
Confidence 011222333444444433333222 11111000 0000000001112223344
Q ss_pred eeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCc
Q 036011 425 GIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQ 504 (977)
Q Consensus 425 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 504 (977)
.+.+.. .+..+-..+|.++..|+.+.+.++... +....|.++.+|+.+.+. +.++.+...+|.++.+|+.++|..+
T Consensus 246 ~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~- 321 (394)
T 4gt6_A 246 AFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG- 321 (394)
T ss_dssp EEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-
T ss_pred eEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-
Confidence 444432 233344567888889999998776554 677788899999999986 4566566778999999999999765
Q ss_pred CCCCcchhhhcccccceeccCCccccccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcc
Q 036011 505 LSGDIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKL 577 (977)
Q Consensus 505 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 577 (977)
++..-..+|.++.+|+.+.+..+ ++.+...+|.++++|+.+++.+|... -..+.....|+.+.+..|.+
T Consensus 322 v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 322 ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 55344568888999999999655 66566778999999999999888654 14566677788887766644
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.31 E-value=6.7e-14 Score=155.97 Aligned_cols=168 Identities=17% Similarity=0.147 Sum_probs=121.3
Q ss_pred cccccEEEeecCccCCCCChhhhcc-----CCCCEEEeecccccCccccccc-cccccceeeecCCccCCCchhhh----
Q 036011 372 LRSLIVLSLFINALNGTIPSTVGRL-----EQLQGLSLYGNNLEGSIPYDLC-HLERLNGIRLNGNKLSGPIPQCL---- 441 (977)
Q Consensus 372 l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~---- 441 (977)
++.|+.|+|++|.++......+... ++|++|+|++|.++......+. .+++|+.|+|++|+++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4567788888888875544454443 6888888888888754343333 46788888999998875444444
Q ss_pred -cCCCCCCeeecCCCcCCCC----CCccccCcccCceEEccCCCCCCC----CccccccccccCeeeCcCCcCCCC----
Q 036011 442 -ASLISLRELNLGSNKFSSS----IPSSFWSLEYLLAVNLSSNSLSGS----LPSNIQNLQVLINLDLSRNQLSGD---- 508 (977)
Q Consensus 442 -~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 508 (977)
...++|++|+|++|.|+.. ++..+...++|++|+|++|.|+.. ++..+...++|++|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 2467899999999988742 334446778899999999998742 355677788999999999999853
Q ss_pred cchhhhcccccceeccCCccccccccccccC
Q 036011 509 IPITIGSLKDLVTLSLASNQFEGPIPQTFGS 539 (977)
Q Consensus 509 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 539 (977)
++..+...++|++|+|++|.|++.....+..
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 3445566789999999999998665555544
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=5.2e-12 Score=140.19 Aligned_cols=107 Identities=19% Similarity=0.170 Sum_probs=91.1
Q ss_pred CcccceEecCCCCcEEEEEcCCC-CCCccCCccccCcccccEeeccC-CcccccCCCCcCCCCCCCEEeCcCccCCCCCC
Q 036011 38 CKWVGISCGARHQRVRALNLSNM-GLRGTIPPHLGNFSFLMSLDISK-NNFHAYLPNELGQLRRLRFISLDYNEFSGSFP 115 (977)
Q Consensus 38 c~w~gv~c~~~~~~v~~L~l~~~-~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 115 (977)
|.|.+|.| +++ +|+ .+|+ ++.+++|++|+|++ |+|++..|..|.+|++|++|+|++|+|++..|
T Consensus 8 C~~~~v~~------------~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRC------------TRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEEC------------CSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEc------------CCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 77766555 445 677 5898 99999999999996 99999777899999999999999999998888
Q ss_pred ccccccccCcEEeccCcCCCCCCCCcccCcCcccceeccccccc
Q 036011 116 SWIGVLSKLQILSLRNNSFTGPIPNSLFNLSRLEKWDSMFNIID 159 (977)
Q Consensus 116 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~i~ 159 (977)
..|+.|++|++|+|++|+|++..+..+..++ |+.|+|.+|.+.
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 8999999999999999999966555555555 888888888876
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=5.6e-12 Score=139.95 Aligned_cols=103 Identities=23% Similarity=0.210 Sum_probs=53.1
Q ss_pred eecCCC-cCCCCCCccccCcccCceEEccC-CCCCCCCccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCCc
Q 036011 450 LNLGSN-KFSSSIPSSFWSLEYLLAVNLSS-NSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLASN 527 (977)
Q Consensus 450 L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 527 (977)
++++++ +++ .+|. +..+++|+.|+|++ |+|++..+..|.++++|++|+|++|+|++..|..|+.+++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 444 2333 44444555555543 5555444445555555555555555555544555555555555555555
Q ss_pred cccccccccccCccccCeeeccCCccCC
Q 036011 528 QFEGPIPQTFGSLTGLESLDLSNNNLSG 555 (977)
Q Consensus 528 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 555 (977)
+|++..+..|..++ |+.|+|++|++..
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 55544444444444 6666666666553
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=1.9e-11 Score=129.86 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=116.0
Q ss_pred HHhhcCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-CCCcceEeeeeecCCeeEEE
Q 036011 679 QRATDGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-HRNLIKIFSSCCNNDFRALV 757 (977)
Q Consensus 679 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 757 (977)
....++|++....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++.+.+..++|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 344567888888999999999999864 6899999987543233456899999999984 67788999999888899999
Q ss_pred EeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 036011 758 LELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGH------------------------------------- 800 (977)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------------------------------------- 800 (977)
|||++|.++.+.... ......++.+++++++.||...
T Consensus 89 ~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 89 MSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp EECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 999999999876321 1233478899999999999611
Q ss_pred -------------------CCCeEeCCCCCCceeeCCCCceEEeeccccc
Q 036011 801 -------------------STPVVHCDLKPSNILLDEDMVAHVSDFGLSK 831 (977)
Q Consensus 801 -------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 831 (977)
...++|||++|.||+++++..+.|+||+.+.
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876667799998765
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.07 E-value=2e-10 Score=121.78 Aligned_cols=138 Identities=17% Similarity=0.104 Sum_probs=102.2
Q ss_pred cCCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCC--cceEeeeeecCCeeEEEEec
Q 036011 683 DGFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRN--LIKIFSSCCNNDFRALVLEL 760 (977)
Q Consensus 683 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~ 760 (977)
.+|.+....+.|..+.||++...+|+.+++|+.... ....+.+|+++++.+++.+ +.+++++....+..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 344443333456669999998777888999997643 2356889999999986444 45688888877788999999
Q ss_pred cCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 036011 761 MPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGH---------------------------------------- 800 (977)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~---------------------------------------- 800 (977)
++|.++. ... .+ ...++.++++.++.||...
T Consensus 97 i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 97 VPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp CSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred cCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 9998884 211 11 2367788888888888532
Q ss_pred ---------------CCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 801 ---------------STPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 801 ---------------~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
..+++|||++|.||++++++.+.|+|||.+..
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998753
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.06 E-value=3.9e-09 Score=118.50 Aligned_cols=302 Identities=11% Similarity=0.058 Sum_probs=137.8
Q ss_pred cccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccceeEEEccCCcccccccCCCccccCC
Q 036011 165 RIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTITLINLFGNQLSGHLDLPPKVSYSL 244 (977)
Q Consensus 165 ~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l 244 (977)
++....+|+.+.+.. .++.....+|.++.+|+.+.|..+ ++.+...+|.++ +|+.+.+..+ ++ .+...+|..
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~---~I~~~aF~~- 112 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK---KFGDYVFQG- 112 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC---EECTTTTTT-
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee---Eeccceecc-
Confidence 455556788877764 455444567888888888888654 554444555554 4555555433 22 233444433
Q ss_pred CCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccccccccCCCCCCchhhhhcccccCC
Q 036011 245 PNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNLANNYLTTDSPTAEWSFLSSLTNCR 324 (977)
Q Consensus 245 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~ 324 (977)
.+|+.+.+..+-.. .-...|.+ .+|+.+.+..+ ++.+....|. .+.
T Consensus 113 ~~L~~i~lp~~~~~-i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~-------------------------------~~~ 158 (379)
T 4h09_A 113 TDLDDFEFPGATTE-IGNYIFYN-SSVKRIVIPKS-VTTIKDGIGY-------------------------------KAE 158 (379)
T ss_dssp CCCSEEECCTTCCE-ECTTTTTT-CCCCEEEECTT-CCEECSCTTT-------------------------------TCT
T ss_pred CCcccccCCCcccc-cccccccc-ceeeeeeccce-eeccccchhc-------------------------------ccc
Confidence 25555555543222 22223332 23444433322 2223333333 444
Q ss_pred CCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEeecCccCCCCChhhhccCCCCEEEe
Q 036011 325 NLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSLFINALNGTIPSTVGRLEQLQGLSL 404 (977)
Q Consensus 325 ~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 404 (977)
+++.+.+..+.......... . .+ . .......+.....+..+.+....- ......+....+|+.+.+
T Consensus 159 ~l~~~~~~~~~~~~~~~~~~-~----------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~ 224 (379)
T 4h09_A 159 NLEKIEVSSNNKNYVAENYV-L----------YN-K-NKTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITI 224 (379)
T ss_dssp TCCEEEECTTCSSEEEETTE-E----------EE-T-TSSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEEC
T ss_pred cccccccccccceeecccce-e----------cc-c-ccceecccccccccccccccccee-EEeecccccccccceeee
Confidence 44444444332211000000 0 00 0 001111222333333333332221 133444555556666655
Q ss_pred ecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCC
Q 036011 405 YGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGS 484 (977)
Q Consensus 405 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 484 (977)
..+ +..+....+..+..|+.+.+..+ ++.+-..+|.++.+|+.+.+..+ +..+....|.++++|+.+.+.++.++.+
T Consensus 225 ~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I 301 (379)
T 4h09_A 225 TSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETL 301 (379)
T ss_dssp CTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEE
T ss_pred ccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccccccccee
Confidence 443 22233445555555666555544 33333445555555665555433 3334444555555555555555555544
Q ss_pred CccccccccccCeeeCcCCcCCCCcchhhhcccccceeccCC
Q 036011 485 LPSNIQNLQVLINLDLSRNQLSGDIPITIGSLKDLVTLSLAS 526 (977)
Q Consensus 485 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 526 (977)
...+|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+..
T Consensus 302 ~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 302 EPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred hhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 4455555555555555433 3322233455555555555543
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.05 E-value=5e-09 Score=117.59 Aligned_cols=316 Identities=10% Similarity=0.045 Sum_probs=201.6
Q ss_pred cccCcCcccceeccccccccccCccccCccccceeeeecccccccCCccccCCCCCceEEeeccCCCCCCchhhccccce
Q 036011 141 SLFNLSRLEKWDSMFNIIDGNIPSRIGNLSSLVNVNLAYNNLQGEIPSEIGNLQNLEILVLGMNNLSGPIQPSIFNISTI 220 (977)
Q Consensus 141 ~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L 220 (977)
++....+|+.+.+..+ ++......|.++.+|+.+.|..+ ++.....+|.++ +|+.+.+..+ ++.....+|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 4556677888887643 55456678999999999999755 664556688887 7888888754 55344444544 589
Q ss_pred eEEEccCCcccccccCCCccccCCCCceEEEecCceeeecCCcccccccccceEeecccccccccccccccccccccccc
Q 036011 221 TLINLFGNQLSGHLDLPPKVSYSLPNLRVFSLGKNKLTGTIPNSITNASKLTGLDLSFNSFSGLIPHTFGNLRFLSVLNL 300 (977)
Q Consensus 221 ~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 300 (977)
+.+.+.++.. .+...+|... +|+.+.+..+ ++..-...+..+.+++.+.+..+.........+ ........
T Consensus 116 ~~i~lp~~~~----~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 186 (379)
T 4h09_A 116 DDFEFPGATT----EIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-LYNKNKTI-- 186 (379)
T ss_dssp SEEECCTTCC----EECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTE-EEETTSSE--
T ss_pred ccccCCCccc----cccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccce-ecccccce--
Confidence 9999987643 3445556543 6777776654 343566778888999998887765543221111 00000000
Q ss_pred cccccCCCCCCchhhhhcccccCCCCceEEecCCCCCCCCCcccccccccccccccccCcccccCCccccccccccEEEe
Q 036011 301 ANNYLTTDSPTAEWSFLSSLTNCRNLTTLAVASNPLRGILPPVIGNFSASLQNFYAYDCKLTGNIPHEIGNLRSLIVLSL 380 (977)
Q Consensus 301 ~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 380 (977)
...+..+..+..+.+.... .......+....+|+.+.+
T Consensus 187 ----------------~~~~~~~~~~~~~~~~~~~--------------------------~~i~~~~f~~~~~l~~i~~ 224 (379)
T 4h09_A 187 ----------------LESYPAAKTGTEFTIPSTV--------------------------KTVTAYGFSYGKNLKKITI 224 (379)
T ss_dssp ----------------EEECCTTCCCSEEECCTTC--------------------------CEECTTTTTTCSSCSEEEC
T ss_pred ----------------eccccccccccccccccce--------------------------eEEeecccccccccceeee
Confidence 0012223333333322211 1122234455566666666
Q ss_pred ecCccCCCCChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCCCCCCeeecCCCcCCCC
Q 036011 381 FINALNGTIPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASLISLRELNLGSNKFSSS 460 (977)
Q Consensus 381 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 460 (977)
..+ +......+|.++..|+.+.+..+ ++.+-...|.++.+|+.+.+..+ +..+...+|.++++|+.+.+.++.++.+
T Consensus 225 ~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I 301 (379)
T 4h09_A 225 TSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETL 301 (379)
T ss_dssp CTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEE
T ss_pred ccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccccccccee
Confidence 544 33355667777888888888765 55455667777888888888654 5435556788888888888888888877
Q ss_pred CCccccCcccCceEEccCCCCCCCCccccccccccCeeeCcCCcCCCCcchhhhccc
Q 036011 461 IPSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDLSRNQLSGDIPITIGSLK 517 (977)
Q Consensus 461 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 517 (977)
...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++..-..+|.++.
T Consensus 302 ~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 302 EPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred hhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 7788888888888888754 66556678888888988888665 5533345666654
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.94 E-value=5.2e-10 Score=123.29 Aligned_cols=184 Identities=15% Similarity=0.167 Sum_probs=102.9
Q ss_pred cccccccccEEEeecCccC---------CCCChhhhccCCCCEEEeeccc-ccCccccccccccccceeeecCCccCCCc
Q 036011 368 EIGNLRSLIVLSLFINALN---------GTIPSTVGRLEQLQGLSLYGNN-LEGSIPYDLCHLERLNGIRLNGNKLSGPI 437 (977)
Q Consensus 368 ~~~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 437 (977)
++..+++|+.|.+..+... +.+...+..+++|+.|+|++|. +. ++. + .+++|+.|+|..|.+....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHH
Confidence 4556778888877655331 1244556777888888887773 22 222 2 3677777777777765433
Q ss_pred hhhhc--CCCCCCeeecCC--CcCCCCCCccccCcccCceEEccCCCCCCCCcccc--ccccccCeeeCcCCcCCCCcch
Q 036011 438 PQCLA--SLISLRELNLGS--NKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNI--QNLQVLINLDLSRNQLSGDIPI 511 (977)
Q Consensus 438 p~~~~--~l~~L~~L~L~~--N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~ 511 (977)
...+. .+++|+.|+|+. |...+.. .+. .| ...+ ..+++|+.|+|++|.+.+..+.
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~~---~l--------------~~~l~~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDG--DMN---VF--------------RPLFSKDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCS--CGG---GT--------------GGGSCTTTCTTCCEEEEESCTTHHHHHH
T ss_pred HHHHHHccCCCCcEEEEeccccccccch--hHH---HH--------------HHHHhcCCCCCcCEEeCCCCCCchHHHH
Confidence 33343 567777777642 2211110 000 00 0011 1345677777777766543333
Q ss_pred hhh---cccccceeccCCcccccc----ccccccCccccCeeeccCCccCCCCCccccc-ccccCccccCCCc
Q 036011 512 TIG---SLKDLVTLSLASNQFEGP----IPQTFGSLTGLESLDLSNNNLSGEIPKSLEA-LLFLKQLNVSHNK 576 (977)
Q Consensus 512 ~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~ 576 (977)
.+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+.. + ...+++++|+
T Consensus 271 ~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 333 466777777777777653 3334455677888888888776332222322 2 2557777776
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.94 E-value=3.4e-10 Score=124.78 Aligned_cols=190 Identities=20% Similarity=0.224 Sum_probs=116.4
Q ss_pred ccccEEEeecCccCC-C-------CChhhhccCCCCEEEeecccccCccccccccccccceeeecCCccCCCchhhhcCC
Q 036011 373 RSLIVLSLFINALNG-T-------IPSTVGRLEQLQGLSLYGNNLEGSIPYDLCHLERLNGIRLNGNKLSGPIPQCLASL 444 (977)
Q Consensus 373 ~~L~~L~L~~N~l~~-~-------~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 444 (977)
..++.|.+......+ . +..+...+++|+.|.+..+..... .++... .+.+...+..+
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~--------------~is~~~-~~~L~~ll~~~ 171 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQ--------------EISWIE-QVDLSPVLDAM 171 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTC--------------CGGGCB-CCBCHHHHHTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhc--------------cccccc-ccCHHHHHhcC
Confidence 455667776555432 1 123455677888887765433210 000000 11344556667
Q ss_pred CCCCeeecCCCcCCCCCCccccCcccCceEEccCCCCCCCCccccc--cccccCeeeCcC--CcCCCC-----cchhh--
Q 036011 445 ISLRELNLGSNKFSSSIPSSFWSLEYLLAVNLSSNSLSGSLPSNIQ--NLQVLINLDLSR--NQLSGD-----IPITI-- 513 (977)
Q Consensus 445 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~-- 513 (977)
++|+.|+|++|.-. .++. + .+++|+.|++..+.++......+. .+++|+.|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 77777777776311 1222 3 267788888887776533223333 577888888753 221111 11122
Q ss_pred hcccccceeccCCcccccccccccc---CccccCeeeccCCccCCC----CCcccccccccCccccCCCccccc
Q 036011 514 GSLKDLVTLSLASNQFEGPIPQTFG---SLTGLESLDLSNNNLSGE----IPKSLEALLFLKQLNVSHNKLEGE 580 (977)
Q Consensus 514 ~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 580 (977)
..+++|+.|+|++|.+.+..+..+. .+++|++|||+.|.|++. ++..+..+++|+.|+|++|.++..
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 3578999999999999865444443 588999999999999863 455557789999999999998743
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.86 E-value=4.4e-09 Score=117.02 Aligned_cols=143 Identities=16% Similarity=0.196 Sum_probs=107.6
Q ss_pred cCccccCcceEEEEEEEeCCCCEEEEEEee--ccc-hhhHHHHHHHHHHHHhcC--CCCcceEeeeeecC---CeeEEEE
Q 036011 687 ECNLLGRGSFGSVYKGTFSDGTSFAIKVFN--LQL-DRAFRSFDSECEVLRNVR--HRNLIKIFSSCCNN---DFRALVL 758 (977)
Q Consensus 687 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 758 (977)
..+.++.|.++.||+.+.. +..+++|+.. ... ......+.+|+++++.++ +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4567899999999999875 4688899876 322 123457889999999997 45578888888766 4588999
Q ss_pred eccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 036011 759 ELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGH-------------------------------------- 800 (977)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 800 (977)
||++|..+.+.. -..++...+..++.+++++|+.||...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998875421 112678888899999999999999621
Q ss_pred -----------------CCCeEeCCCCCCceeeCCCCc--eEEeeccccccc
Q 036011 801 -----------------STPVVHCDLKPSNILLDEDMV--AHVSDFGLSKLF 833 (977)
Q Consensus 801 -----------------~~~ivH~dlk~~NIll~~~~~--~kl~Dfgla~~~ 833 (977)
...++|||+++.||+++.++. +.|+||+.+...
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997753 689999998753
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.83 E-value=3e-11 Score=126.07 Aligned_cols=145 Identities=14% Similarity=0.104 Sum_probs=72.3
Q ss_pred CCCcccceEecCCCCcEEEEEcCC---CCCCccCCc-cccCcccccEeeccCCcccccCC-CCcCCCCCCCE--EeCcCc
Q 036011 36 PICKWVGISCGARHQRVRALNLSN---MGLRGTIPP-HLGNFSFLMSLDISKNNFHAYLP-NELGQLRRLRF--ISLDYN 108 (977)
Q Consensus 36 ~~c~w~gv~c~~~~~~v~~L~l~~---~~l~~~~~~-~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~--L~L~~n 108 (977)
..|.|.|+.|+....+|..+-..+ ..+.+.+++ .+..++. .|....|.-++.++ +.|...+.|.. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 357899999998777777665544 233444432 2333332 22223333332222 12444445554 566666
Q ss_pred cCCCCCCcc----ccccccCcEEeccCcCCCC--CCCCcccCcCcccceeccccccccccCccccCcc--ccceeeeecc
Q 036011 109 EFSGSFPSW----IGVLSKLQILSLRNNSFTG--PIPNSLFNLSRLEKWDSMFNIIDGNIPSRIGNLS--SLVNVNLAYN 180 (977)
Q Consensus 109 ~l~~~~p~~----~~~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~l~~n~i~~~~p~~~~~l~--~L~~L~L~~n 180 (977)
... .++.. ..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|.|++. ..+..+. +|++|+|++|
T Consensus 154 ~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~N 230 (267)
T 3rw6_A 154 RRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGN 230 (267)
T ss_dssp SHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTS
T ss_pred HHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCC
Confidence 433 33322 2456677777777777775 2233344444555555555544432 1222222 4455555555
Q ss_pred ccccc
Q 036011 181 NLQGE 185 (977)
Q Consensus 181 ~i~~~ 185 (977)
.+.+.
T Consensus 231 pl~~~ 235 (267)
T 3rw6_A 231 SLCDT 235 (267)
T ss_dssp TTGGG
T ss_pred cCccc
Confidence 55443
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77 E-value=3.5e-09 Score=114.86 Aligned_cols=187 Identities=15% Similarity=0.156 Sum_probs=123.2
Q ss_pred CccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-CCC--cceEeeeeecCC---eeEEEEecc
Q 036011 688 CNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-HRN--LIKIFSSCCNND---FRALVLELM 761 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 761 (977)
++.++.|.+..||+.. +.+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999873 56889986533 34567889999999884 333 334444443332 347899999
Q ss_pred CCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 036011 762 PNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGH----------------------------------------- 800 (977)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 800 (977)
+|.++.+.... .++..++..++.++++.++.||...
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888653321 2677788888999999999998511
Q ss_pred --------------CCCeEeCCCCCCceeeCC--CCceEEeecccccccCCCCCcceeec------------cccCCccc
Q 036011 801 --------------STPVVHCDLKPSNILLDE--DMVAHVSDFGLSKLFDEGDDSVTQTM------------TIATIGYM 852 (977)
Q Consensus 801 --------------~~~ivH~dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~~~~~~~------------~~gt~~y~ 852 (977)
...++|+|++|.||++++ ...+.++||+.+....+......... .....++.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 135799999999999998 55688999999876433211000000 00000111
Q ss_pred C-ccccCCCCcCcccchhhHhHHHHHHhcCCCCC
Q 036011 853 A-PEYGTEGIVSSKCDVYSYGVLLTETFTRKKPT 885 (977)
Q Consensus 853 a-PE~~~~~~~~~~~DvwslG~il~elltg~~p~ 885 (977)
. |+... ......+.|++|.++|.+.+|..+|
T Consensus 256 ~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 256 DIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1 22111 1112368999999999999998775
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.48 E-value=1.8e-08 Score=105.04 Aligned_cols=79 Identities=27% Similarity=0.386 Sum_probs=45.1
Q ss_pred cccccCeeeCcCCcCCC--CcchhhhcccccceeccCCccccccccccccCcc--ccCeeeccCCccCCCCCc-------
Q 036011 491 NLQVLINLDLSRNQLSG--DIPITIGSLKDLVTLSLASNQFEGPIPQTFGSLT--GLESLDLSNNNLSGEIPK------- 559 (977)
Q Consensus 491 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~------- 559 (977)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 44556666666666654 3344555666666666666666643 2333333 666677777766655542
Q ss_pred ccccccccCccc
Q 036011 560 SLEALLFLKQLN 571 (977)
Q Consensus 560 ~~~~l~~L~~L~ 571 (977)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 245566666654
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.45 E-value=7.5e-07 Score=97.04 Aligned_cols=138 Identities=20% Similarity=0.204 Sum_probs=102.6
Q ss_pred CCCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCC---C-CcceEeeeeecCCeeEEEEe
Q 036011 684 GFNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRH---R-NLIKIFSSCCNNDFRALVLE 759 (977)
Q Consensus 684 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~-niv~l~~~~~~~~~~~lv~e 759 (977)
.....+.++.|....||+. |+.+++|+.... .....+.+|.++++.+.+ + .+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4556678999999999998 677899986432 223568899999998865 1 23444444 56789999
Q ss_pred ccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 036011 760 LMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHS-------------------------------------- 801 (977)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------------- 801 (977)
|++|.++.+.... .++..+...++.++++.++.||....
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988643211 25667778888888888888884322
Q ss_pred ----------------------CCeEeCCCCCCceeeCCCCceEEeecccccccC
Q 036011 802 ----------------------TPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFD 834 (977)
Q Consensus 802 ----------------------~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 834 (977)
..++|+|++|.||+++++..+.|+||+.+....
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999997667999999986543
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.43 E-value=3.2e-08 Score=98.33 Aligned_cols=43 Identities=12% Similarity=0.166 Sum_probs=18.7
Q ss_pred ccccccccceeeecCC-ccCCC----chhhhcCCCCCCeeecCCCcCC
Q 036011 416 DLCHLERLNGIRLNGN-KLSGP----IPQCLASLISLRELNLGSNKFS 458 (977)
Q Consensus 416 ~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 458 (977)
.+...++|+.|+|++| .+... +...+...++|++|+|++|+|.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 3444455555555555 44321 2223333444444444444443
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=3.8e-08 Score=97.76 Aligned_cols=70 Identities=14% Similarity=0.191 Sum_probs=37.7
Q ss_pred chhhhcCCCCCCeeecCCC-cCCCC----CCccccCcccCceEEccCCCCCCC----CccccccccccCeeeCcCCcCC
Q 036011 437 IPQCLASLISLRELNLGSN-KFSSS----IPSSFWSLEYLLAVNLSSNSLSGS----LPSNIQNLQVLINLDLSRNQLS 506 (977)
Q Consensus 437 ~p~~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 506 (977)
+...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 4456667778888888888 77632 122333445566666666655421 1222333344555555555554
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.33 E-value=2.3e-06 Score=91.27 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=60.6
Q ss_pred cCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCC---CcceEeeeeecCCeeEEEEeccCC
Q 036011 687 ECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHR---NLIKIFSSCCNNDFRALVLELMPN 763 (977)
Q Consensus 687 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 763 (977)
..+.++.|.++.||+++..+|+.++||+.+.........|.+|++.++.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35679999999999999888999999996543332346789999999999865 567777763 36899999999
Q ss_pred CCH
Q 036011 764 GSL 766 (977)
Q Consensus 764 gsL 766 (977)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.30 E-value=3.7e-06 Score=90.79 Aligned_cols=136 Identities=13% Similarity=0.097 Sum_probs=96.6
Q ss_pred CccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCC---CcceEeeeee-cCCeeEEEEeccCC
Q 036011 688 CNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHR---NLIKIFSSCC-NNDFRALVLELMPN 763 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 763 (977)
++.++.|....||+. |+.+++|+... ......+.+|+++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456788988999988 56788998532 23456789999999999652 3556666664 45567899999999
Q ss_pred CCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 036011 764 GSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHG-------------------------------------------- 799 (977)
Q Consensus 764 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-------------------------------------------- 799 (977)
.++.+.... .++......++.++++.|+.||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888763211 134555566666666666666632
Q ss_pred -------------CCCCeEeCCCCCCceeeCC---CCc-eEEeecccccc
Q 036011 800 -------------HSTPVVHCDLKPSNILLDE---DMV-AHVSDFGLSKL 832 (977)
Q Consensus 800 -------------~~~~ivH~dlk~~NIll~~---~~~-~kl~Dfgla~~ 832 (977)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999997 455 48999998764
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=4.7e-06 Score=88.30 Aligned_cols=135 Identities=19% Similarity=0.118 Sum_probs=99.2
Q ss_pred cccCcceE-EEEEEEeC-CCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-CCCcceEeeeeecCCeeEEEEeccCCCCH
Q 036011 690 LLGRGSFG-SVYKGTFS-DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-HRNLIKIFSSCCNNDFRALVLELMPNGSL 766 (977)
Q Consensus 690 ~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL 766 (977)
.+..|..+ .||+.... ++..+++|+-+.. ....+.+|.+.++.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556555 68988764 5678999986533 3456888999999884 33367788888889999999999999888
Q ss_pred HHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 036011 767 EKWLYSDNYFLDLLERLNIMIGVALALEYLHHGH---------------------------------------------- 800 (977)
Q Consensus 767 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~---------------------------------------------- 800 (977)
.+...... .....+..+++..|+.||...
T Consensus 108 ~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 77654321 233456677777777777310
Q ss_pred ---------CCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 801 ---------STPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 801 ---------~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
...++|+|+.+.||++++++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999887778999998763
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.18 E-value=4.8e-06 Score=92.02 Aligned_cols=141 Identities=11% Similarity=0.175 Sum_probs=90.2
Q ss_pred cCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCC--cceEeeeeecC-CeeEEEEeccCC
Q 036011 687 ECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRN--LIKIFSSCCNN-DFRALVLELMPN 763 (977)
Q Consensus 687 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~ 763 (977)
..+.++.|....||+.+. +++.+++|+.... ..+.+|+.+++.+.... +.++++++.+. +..++||||++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 356788999999999886 5788999987533 25888999999886533 45677766654 568899999998
Q ss_pred CCHHHH------------------hhcCC----c------------cCCHHHHH---------------------HHHHH
Q 036011 764 GSLEKW------------------LYSDN----Y------------FLDLLERL---------------------NIMIG 788 (977)
Q Consensus 764 gsL~~~------------------l~~~~----~------------~~~~~~~~---------------------~i~~~ 788 (977)
.++.+. ++... . .-+|.... .....
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 665421 01100 0 00111110 01111
Q ss_pred HHHHHHHHHhcC-CCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 789 VALALEYLHHGH-STPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 789 i~~~L~~LH~~~-~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
+....+++.... ...++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 122222222111 246799999999999988778889999988754
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.12 E-value=3.1e-06 Score=93.75 Aligned_cols=80 Identities=11% Similarity=-0.026 Sum_probs=56.8
Q ss_pred Cccc-cCcceEEEEEEEeC-------CCCEEEEEEeeccch---hhHHHHHHHHHHHHhcC-C--CCcceEeeeeecC--
Q 036011 688 CNLL-GRGSFGSVYKGTFS-------DGTSFAIKVFNLQLD---RAFRSFDSECEVLRNVR-H--RNLIKIFSSCCNN-- 751 (977)
Q Consensus 688 ~~~l-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~-- 751 (977)
.+.| +.|....+|+.... +++.+++|+...... .....+.+|+++++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88989999998764 267899998654320 01246788999999884 3 3466788877654
Q ss_pred -CeeEEEEeccCCCCHH
Q 036011 752 -DFRALVLELMPNGSLE 767 (977)
Q Consensus 752 -~~~~lv~e~~~~gsL~ 767 (977)
+..++||||++|.++.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987764
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.84 E-value=6.9e-05 Score=82.24 Aligned_cols=138 Identities=12% Similarity=0.065 Sum_probs=80.2
Q ss_pred ccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-----CCCcceEe-e--eeecCCeeEEEEec
Q 036011 689 NLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-----HRNLIKIF-S--SCCNNDFRALVLEL 760 (977)
Q Consensus 689 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lv~e~ 760 (977)
+.++.|..+.||+....+| .+++|+..... ..+..|+++++.+. .|.++... | +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677889999987554 58999987531 23344555555553 24443311 1 12345677899999
Q ss_pred cCCCCHH-----H---------Hhhc--C----C-------ccCCHHHH-------------------------------
Q 036011 761 MPNGSLE-----K---------WLYS--D----N-------YFLDLLER------------------------------- 782 (977)
Q Consensus 761 ~~~gsL~-----~---------~l~~--~----~-------~~~~~~~~------------------------------- 782 (977)
++|.++. + .++. . . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 1111 0 0 00123211
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCeEeCCCCCCceeeCCCCceEEeeccccc
Q 036011 783 LNIMIGVALALEYLHH----------GHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSK 831 (977)
Q Consensus 783 ~~i~~~i~~~L~~LH~----------~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 831 (977)
..+...+..++++|+. .....++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111224445666652 135789999999999999888899999999765
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.83 E-value=4.4e-05 Score=85.73 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=49.6
Q ss_pred CccccCcceEEEEEEEeC-CCCEEEEEEeeccch-------hhHHHHHHHHHHHHhcCC--CC-cceEeeeeecCCeeEE
Q 036011 688 CNLLGRGSFGSVYKGTFS-DGTSFAIKVFNLQLD-------RAFRSFDSECEVLRNVRH--RN-LIKIFSSCCNNDFRAL 756 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 756 (977)
.+.+|.|.++.||+++.. +++.|+||....... ...+.+..|.++++.+.. |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 478899998653211 123456789999988742 33 3455544 3445689
Q ss_pred EEeccCCC
Q 036011 757 VLELMPNG 764 (977)
Q Consensus 757 v~e~~~~g 764 (977)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.78 E-value=5.7e-06 Score=79.79 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=23.5
Q ss_pred ccceeeeeccc-ccccCCccccCCCCCceEEeeccC
Q 036011 171 SLVNVNLAYNN-LQGEIPSEIGNLQNLEILVLGMNN 205 (977)
Q Consensus 171 ~L~~L~L~~n~-i~~~~p~~l~~l~~L~~L~l~~N~ 205 (977)
+|++|+|++|. |+...-..+.++++|+.|+|+++.
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 57777777764 665444556677777777777764
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.69 E-value=0.00016 Score=77.64 Aligned_cols=136 Identities=14% Similarity=0.115 Sum_probs=92.0
Q ss_pred CccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcC---CCCcceEeeeeecCCeeEEEEeccCCC
Q 036011 688 CNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR---HRNLIKIFSSCCNNDFRALVLELMPNG 764 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g 764 (977)
.+.|+.|....+|+... +++.++||+.... ....+..|.+.++.+. ...+.++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 46789999999999986 4678999987643 2456889999999884 356788888888888899999999987
Q ss_pred CHH--------H---HhhcCCc---------------------cCCHHHHH---HHHHH----------------HH-HH
Q 036011 765 SLE--------K---WLYSDNY---------------------FLDLLERL---NIMIG----------------VA-LA 792 (977)
Q Consensus 765 sL~--------~---~l~~~~~---------------------~~~~~~~~---~i~~~----------------i~-~~ 792 (977)
.+. + .++.... .-+|.... ++..+ +. ..
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 652 1 1222110 12454322 11111 11 11
Q ss_pred HHHHH-hcCCCCeEeCCCCCCceeeCCCCceEEeecc
Q 036011 793 LEYLH-HGHSTPVVHCDLKPSNILLDEDMVAHVSDFG 828 (977)
Q Consensus 793 L~~LH-~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 828 (977)
.+.|. ......++|+|+.+.|++++.++ +.|.||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22332 12246799999999999999887 8889873
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.55 E-value=5.1e-05 Score=73.14 Aligned_cols=85 Identities=11% Similarity=0.049 Sum_probs=51.1
Q ss_pred cccccEEEeecCccCCCCChhhhccCCCCEEEeeccc-ccCccccccccc----cccceeeecCCc-cCCCchhhhcCCC
Q 036011 372 LRSLIVLSLFINALNGTIPSTVGRLEQLQGLSLYGNN-LEGSIPYDLCHL----ERLNGIRLNGNK-LSGPIPQCLASLI 445 (977)
Q Consensus 372 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~ 445 (977)
-..|+.|+++++.|+..--..+.++++|++|+|++|. |++.--..+..+ ++|+.|+|++|. ++..--..+..++
T Consensus 60 ~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 60 KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 3467777777777765555566677777777777774 554333344443 356666666653 5544344455566
Q ss_pred CCCeeecCCCc
Q 036011 446 SLRELNLGSNK 456 (977)
Q Consensus 446 ~L~~L~L~~N~ 456 (977)
+|+.|+|+++.
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 66666666553
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.52 E-value=0.00025 Score=75.66 Aligned_cols=78 Identities=15% Similarity=0.107 Sum_probs=56.9
Q ss_pred CCcCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCC---CcceEeeeeecCCeeEEEEecc
Q 036011 685 FNECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHR---NLIKIFSSCCNNDFRALVLELM 761 (977)
Q Consensus 685 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~ 761 (977)
...++.+|.|..+.||+.+..+|+.|+||+.+.........|..|++.|+.+.-. -+.+++++. ..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 4445778999999999999999999999987654433345688999999988421 234444432 247899999
Q ss_pred CCCCH
Q 036011 762 PNGSL 766 (977)
Q Consensus 762 ~~gsL 766 (977)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87643
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.44 E-value=0.00035 Score=78.93 Aligned_cols=79 Identities=15% Similarity=0.089 Sum_probs=48.4
Q ss_pred CCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCC---CcCcccchhhHhHHHHH
Q 036011 801 STPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEG---IVSSKCDVYSYGVLLTE 877 (977)
Q Consensus 801 ~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~e 877 (977)
...++|||+++.||+++.++ ++++||+.+..-.+...-...- ..-...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYL-GNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHH-HHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHH-HHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999999876 9999999987643221100000 0011235666544311 12233555677777777
Q ss_pred HhcC
Q 036011 878 TFTR 881 (977)
Q Consensus 878 lltg 881 (977)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.23 E-value=0.00099 Score=72.16 Aligned_cols=156 Identities=10% Similarity=0.102 Sum_probs=87.8
Q ss_pred CCHHHHHHhhcCCCc-----CccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCC--cceEe
Q 036011 673 TSYLDIQRATDGFNE-----CNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRN--LIKIF 745 (977)
Q Consensus 673 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~ 745 (977)
.+..++......|.. .+.++.|....+|+....+| .+++|+..... ..+.+..|+++++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344555555555544 34567788899999987655 68899886521 2234566777777764212 23333
Q ss_pred ee------eecCCeeEEEEeccCCCCHHH--------------HhhcC----Ccc----C---CHHHHHH----------
Q 036011 746 SS------CCNNDFRALVLELMPNGSLEK--------------WLYSD----NYF----L---DLLERLN---------- 784 (977)
Q Consensus 746 ~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~----~~~----~---~~~~~~~---------- 784 (977)
.. ....+..+++|+|++|..+.. .++.. ... . .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 122456789999998865321 01110 000 1 1222110
Q ss_pred --HHHHHHHHHHHHHhc----CCCCeEeCCCCCCceeeCCCCceEEeeccccc
Q 036011 785 --IMIGVALALEYLHHG----HSTPVVHCDLKPSNILLDEDMVAHVSDFGLSK 831 (977)
Q Consensus 785 --i~~~i~~~L~~LH~~----~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 831 (977)
+...+.+.++++++. ...+++|+|+.+.||+++++..+.++||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244555666532 23578999999999999987666899998765
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.23 E-value=8.8e-05 Score=72.87 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=16.9
Q ss_pred cccccceeeecCC-ccCC----CchhhhcCCCCCCeeecCCCcCC
Q 036011 419 HLERLNGIRLNGN-KLSG----PIPQCLASLISLRELNLGSNKFS 458 (977)
Q Consensus 419 ~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~ 458 (977)
+-+.|+.|+|++| +|.. .+.+++...+.|+.|+|++|+|.
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 3344555555543 4431 12233333444444444444444
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.20 E-value=0.0019 Score=70.22 Aligned_cols=140 Identities=14% Similarity=0.071 Sum_probs=75.5
Q ss_pred ccccCcceEE-EEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-C-CCcceEeeeeecCCeeEEEEeccCCCC
Q 036011 689 NLLGRGSFGS-VYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-H-RNLIKIFSSCCNNDFRALVLELMPNGS 765 (977)
Q Consensus 689 ~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~niv~l~~~~~~~~~~~lv~e~~~~gs 765 (977)
+.++.|.... +|+....+|+.+++|....... ..+..|+++++.+. + -.+.+++.+..+.+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566665554 6777664477888886543211 34556777777764 2 22455666543333 78999998767
Q ss_pred HHHHhhcCC-------------------------ccCCHHHHH-------H-------------HHHHHHHHHHHHH---
Q 036011 766 LEKWLYSDN-------------------------YFLDLLERL-------N-------------IMIGVALALEYLH--- 797 (977)
Q Consensus 766 L~~~l~~~~-------------------------~~~~~~~~~-------~-------------i~~~i~~~L~~LH--- 797 (977)
+.+++.... ..++..... . ....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 655443211 001111100 0 0011112222221
Q ss_pred hcCCCCeEeCCCCCCceeeCCC----CceEEeeccccccc
Q 036011 798 HGHSTPVVHCDLKPSNILLDED----MVAHVSDFGLSKLF 833 (977)
Q Consensus 798 ~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfgla~~~ 833 (977)
......++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1224679999999999999875 68999999988754
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.18 E-value=0.0011 Score=71.02 Aligned_cols=128 Identities=13% Similarity=0.125 Sum_probs=77.5
Q ss_pred CccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCc-ceEeeeeecCCeeEEEEecc-CCCC
Q 036011 688 CNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNL-IKIFSSCCNNDFRALVLELM-PNGS 765 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~gs 765 (977)
++.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+ .++++++ .+..++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 678999999999998 56889987643221 2234568888887743223 4555543 33456899999 6655
Q ss_pred HHHH-hhcCCccCCHHHHHHHHHHHHHHHHHHHh----------------------------------------------
Q 036011 766 LEKW-LYSDNYFLDLLERLNIMIGVALALEYLHH---------------------------------------------- 798 (977)
Q Consensus 766 L~~~-l~~~~~~~~~~~~~~i~~~i~~~L~~LH~---------------------------------------------- 798 (977)
+... +.. +..++.++++.|+-||.
T Consensus 95 l~~~~~~~---------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 165 (301)
T 3dxq_A 95 MSPEKFKT---------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSA 165 (301)
T ss_dssp CCHHHHHH---------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHH
T ss_pred CCHhhHhh---------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHH
Confidence 4310 000 00122222222222221
Q ss_pred ----cCCCCeEeCCCCCCceeeCCCCceEEeeccccccc
Q 036011 799 ----GHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLF 833 (977)
Q Consensus 799 ----~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 833 (977)
.....++|+|+.+.||+ ..++.+.++||..+...
T Consensus 166 l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 166 LAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp HHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred HHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 12345799999999999 56677899999987653
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.12 E-value=0.00016 Score=71.06 Aligned_cols=68 Identities=18% Similarity=0.231 Sum_probs=45.7
Q ss_pred hhhccCCCCEEEeecc-cccC----ccccccccccccceeeecCCccCC----CchhhhcCCCCCCeeecCCCcCCC
Q 036011 392 TVGRLEQLQGLSLYGN-NLEG----SIPYDLCHLERLNGIRLNGNKLSG----PIPQCLASLISLRELNLGSNKFSS 459 (977)
Q Consensus 392 ~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~ 459 (977)
.+..-+.|++|+|++| +|.. .+...+...+.|+.|+|++|+|.. .+.+.+...+.|+.|+|++|.|..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3445677888888875 6653 244556667788888888888863 334445566677777777777763
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.09 E-value=0.00091 Score=73.69 Aligned_cols=140 Identities=11% Similarity=0.111 Sum_probs=83.4
Q ss_pred CccccCcceEEEEEEEeC--------CCCEEEEEEeeccchhhHHHHHHHHHHHHhcC-CCCcceEeeeeecCCeeEEEE
Q 036011 688 CNLLGRGSFGSVYKGTFS--------DGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-HRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 758 (977)
.+.+..|-...+|+.... +++.|++|+.... ......+.+|.++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888899999864 3578999986432 223455678999998884 3334566666543 3999
Q ss_pred eccCCCCHHHH-----------------hhcCC----ccCC--HHHHHHHHHHHHH-------------------HHHHH
Q 036011 759 ELMPNGSLEKW-----------------LYSDN----YFLD--LLERLNIMIGVAL-------------------ALEYL 796 (977)
Q Consensus 759 e~~~~gsL~~~-----------------l~~~~----~~~~--~~~~~~i~~~i~~-------------------~L~~L 796 (977)
||++|.++..- ++... .... +..+.++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655310 11111 1112 3444444443322 23333
Q ss_pred H----h-cCCCCeEeCCCCCCceeeCCC----CceEEeecccccc
Q 036011 797 H----H-GHSTPVVHCDLKPSNILLDED----MVAHVSDFGLSKL 832 (977)
Q Consensus 797 H----~-~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfgla~~ 832 (977)
. . .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1 123468999999999999876 7899999988763
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.95 E-value=0.0039 Score=67.62 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=82.0
Q ss_pred ccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCC--cceEeee-----eecCCeeEEEEecc
Q 036011 689 NLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRN--LIKIFSS-----CCNNDFRALVLELM 761 (977)
Q Consensus 689 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~e~~ 761 (977)
+.++ |....||+....+|+.+++|+..... .....+..|..+++.+.... +++++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 77889999887778789999986331 12345677888888774222 3344432 12245667899999
Q ss_pred CCCCHH-----HH---------hhc----C----CccCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 036011 762 PNGSLE-----KW---------LYS----D----NYFLDLLER----LNI---------------MIGVALALEYLHHG- 799 (977)
Q Consensus 762 ~~gsL~-----~~---------l~~----~----~~~~~~~~~----~~i---------------~~~i~~~L~~LH~~- 799 (977)
+|.++. .+ ++. . ....++... ..+ ...+...++.+...
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875432 11 111 0 011222211 001 11122223333321
Q ss_pred ---CCCCeEeCCCCCCceeeCCCCceEEeecccccc
Q 036011 800 ---HSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKL 832 (977)
Q Consensus 800 ---~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 832 (977)
....++|||+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 245689999999999999 4 899999988764
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.94 E-value=0.0013 Score=74.19 Aligned_cols=73 Identities=12% Similarity=0.175 Sum_probs=49.8
Q ss_pred CccccCcceEEEEEEEeCC--------CCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCC-cceEeeeeecCCeeEEEE
Q 036011 688 CNLLGRGSFGSVYKGTFSD--------GTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRN-LIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 758 (977)
++.|+.|....||++...+ ++.+++|+..... ..+.+..|..+++.+...+ ..++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3568888889999998653 5789999984321 1144557999988885333 3566665542 3899
Q ss_pred eccCCCCH
Q 036011 759 ELMPNGSL 766 (977)
Q Consensus 759 e~~~~gsL 766 (977)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.83 E-value=0.0012 Score=60.63 Aligned_cols=57 Identities=23% Similarity=0.319 Sum_probs=31.9
Q ss_pred eeccCCcccc-ccccccccCccccCeeeccCCccCCCCCcccccccccCccccCCCcccc
Q 036011 521 TLSLASNQFE-GPIPQTFGSLTGLESLDLSNNNLSGEIPKSLEALLFLKQLNVSHNKLEG 579 (977)
Q Consensus 521 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 579 (977)
.++.+++.|+ ..+|..+. ++|+.|||++|+|+...+..|..+++|+.|+|++|+|..
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 4555555554 12343221 246666666666664444555666666666666666654
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.69 E-value=0.0041 Score=70.35 Aligned_cols=74 Identities=15% Similarity=0.210 Sum_probs=48.7
Q ss_pred CccccCcceEEEEEEEeCC-CCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCc-ceEeeeeecCCeeEEEEeccCCCC
Q 036011 688 CNLLGRGSFGSVYKGTFSD-GTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNL-IKIFSSCCNNDFRALVLELMPNGS 765 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs 765 (977)
++.|+.|-...+|++...+ +..+++|+....... .-...+|..+++.+...++ .++++++. + ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4578888899999998764 578899987543221 1123689999998864444 46676663 2 36999998754
Q ss_pred H
Q 036011 766 L 766 (977)
Q Consensus 766 L 766 (977)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.68 E-value=0.0051 Score=60.55 Aligned_cols=102 Identities=13% Similarity=0.029 Sum_probs=69.3
Q ss_pred CHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeecccccccCCCCCcceeec
Q 036011 765 SLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSKLFDEGDDSVTQTM 844 (977)
Q Consensus 765 sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 844 (977)
+|.+++...+.++++.++|.++.|.+.+|.-.-. +..-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 8999999998899999999999999999887621 11111223457899999999988764 1110
Q ss_pred cccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCC
Q 036011 845 TIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKP 884 (977)
Q Consensus 845 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 884 (977)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122366888753 3456788999999999999876555
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.62 E-value=0.0025 Score=70.40 Aligned_cols=73 Identities=14% Similarity=0.237 Sum_probs=45.2
Q ss_pred ccccCcceEEEEEEEeCC---------CCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCC-cceEeeeeecCCeeEEEE
Q 036011 689 NLLGRGSFGSVYKGTFSD---------GTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRN-LIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 689 ~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 758 (977)
+.++.|....+|+....+ ++.+++|+....... ......|.++++.+...+ +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 467788888999998653 278999987543221 223467888888885333 44666544 2 36899
Q ss_pred eccCCCCH
Q 036011 759 ELMPNGSL 766 (977)
Q Consensus 759 e~~~~gsL 766 (977)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.60 E-value=0.011 Score=64.33 Aligned_cols=68 Identities=13% Similarity=0.162 Sum_probs=44.3
Q ss_pred cCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcC---CCCcceEeee------eecCCeeEEEEeccC
Q 036011 692 GRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVR---HRNLIKIFSS------CCNNDFRALVLELMP 762 (977)
Q Consensus 692 g~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~------~~~~~~~~lv~e~~~ 762 (977)
|.|....||+....+| .+++|+...... ..|+..++.+. -|.+++++.. ....+..++||+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3444679999987777 899998765431 34666666553 2334454432 233567789999999
Q ss_pred CCCH
Q 036011 763 NGSL 766 (977)
Q Consensus 763 ~gsL 766 (977)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.19 E-value=0.012 Score=64.95 Aligned_cols=139 Identities=16% Similarity=0.174 Sum_probs=82.5
Q ss_pred ccccCcceEEEEEEEeCC--------CCEEEEEEeeccchh------------------hHHHHHHHHHHHHhcC-CCCc
Q 036011 689 NLLGRGSFGSVYKGTFSD--------GTSFAIKVFNLQLDR------------------AFRSFDSECEVLRNVR-HRNL 741 (977)
Q Consensus 689 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~-h~ni 741 (977)
+.+..|-...+|++...+ ++.|.+++.-...+. ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 457778888999998753 378889887443211 0112335888888884 4445
Q ss_pred ceEeeeeecCCeeEEEEeccCCCCHHH--H---------------hhcCC----ccCC--HHHHHHHHHHHH--------
Q 036011 742 IKIFSSCCNNDFRALVLELMPNGSLEK--W---------------LYSDN----YFLD--LLERLNIMIGVA-------- 790 (977)
Q Consensus 742 v~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~----~~~~--~~~~~~i~~~i~-------- 790 (977)
.++++++.+ .+|+||++|.+|.. + ++... .... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567776643 28999998755421 1 11111 1122 223333333221
Q ss_pred --------------HHHHH----HHh-cCCCCeEeCCCCCCceeeCCC------CceEEeeccccc
Q 036011 791 --------------LALEY----LHH-GHSTPVVHCDLKPSNILLDED------MVAHVSDFGLSK 831 (977)
Q Consensus 791 --------------~~L~~----LH~-~~~~~ivH~dlk~~NIll~~~------~~~kl~Dfgla~ 831 (977)
+-+.. |.. .....++|+|+.+.||+++++ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 222 224468899999999999876 789999998775
No 445
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.15 E-value=0.008 Score=54.98 Aligned_cols=56 Identities=25% Similarity=0.316 Sum_probs=32.8
Q ss_pred EEEcCCCCCC-ccCCccccCcccccEeeccCCcccccCCCCcCCCCCCCEEeCcCccCC
Q 036011 54 ALNLSNMGLR-GTIPPHLGNFSFLMSLDISKNNFHAYLPNELGQLRRLRFISLDYNEFS 111 (977)
Q Consensus 54 ~L~l~~~~l~-~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 111 (977)
.++.++++|+ ..+|..+ -.+|++|+|++|+|+.+.+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777775 3455432 234666666666666654555556666666666666544
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.71 E-value=0.012 Score=65.76 Aligned_cols=74 Identities=11% Similarity=0.174 Sum_probs=49.3
Q ss_pred CccccCcceEEEEEEEeCC--------CCEEEEEEeeccchhhHHHHHHHHHHHHhcC-CCCcceEeeeeecCCeeEEEE
Q 036011 688 CNLLGRGSFGSVYKGTFSD--------GTSFAIKVFNLQLDRAFRSFDSECEVLRNVR-HRNLIKIFSSCCNNDFRALVL 758 (977)
Q Consensus 688 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 758 (977)
++.+..|-...+|+....+ ++.|++|+..... ...-...+|.++++.+. +.-..++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567778888999998753 6889999865432 22223467888888884 333445555332 26899
Q ss_pred eccCCCCH
Q 036011 759 ELMPNGSL 766 (977)
Q Consensus 759 e~~~~gsL 766 (977)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.65 E-value=0.11 Score=57.89 Aligned_cols=30 Identities=33% Similarity=0.396 Sum_probs=25.2
Q ss_pred CeEeCCCCCCceee------CCCCceEEeecccccc
Q 036011 803 PVVHCDLKPSNILL------DEDMVAHVSDFGLSKL 832 (977)
Q Consensus 803 ~ivH~dlk~~NIll------~~~~~~kl~Dfgla~~ 832 (977)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567899999988764
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.62 E-value=8.4 Score=37.94 Aligned_cols=116 Identities=11% Similarity=0.118 Sum_probs=75.2
Q ss_pred CCCCcceEeeeeecCCeeEEEEeccCCC-CHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCcee
Q 036011 737 RHRNLIKIFSSCCNNDFRALVLELMPNG-SLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNIL 815 (977)
Q Consensus 737 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIl 815 (977)
.||+. -..+-.+++...+.++.-+++ +.. .++. .+...+++++..|+...+ .|...-+|--+.|+||+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~~----~~~~eKlrll~nl~~L~~----~~~~~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIRK----TTLLSRIRAAIHLVSKVK----HHSARRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHHT----SCHHHHHHHHHHHHHHHS----SCCSSSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHHh----cCHHHHHHHHHHHHHHHH----HhhhCceeEEEeCceEE
Confidence 58887 344446677777777765333 333 2322 678899998888876555 22345678889999999
Q ss_pred eCCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCc
Q 036011 816 LDEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDD 887 (977)
Q Consensus 816 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~ 887 (977)
+|.++.+++.-.|+-..+ +|.- .+..-=.-.+=+++..++.++..|++
T Consensus 117 f~~~~~p~i~hRGi~~~l-------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL-------------------PPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ECTTCCEEESCCEETTTB-------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EeCCCcEEEEEcCCcccC-------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999987764332 2221 11112233456778888888877643
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=70.62 E-value=6.9 Score=38.42 Aligned_cols=118 Identities=15% Similarity=0.135 Sum_probs=78.6
Q ss_pred CCCCcceEeeeeecCCeeEEEEeccCCCCHHHHhhcCCccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCceee
Q 036011 737 RHRNLIKIFSSCCNNDFRALVLELMPNGSLEKWLYSDNYFLDLLERLNIMIGVALALEYLHHGHSTPVVHCDLKPSNILL 816 (977)
Q Consensus 737 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 816 (977)
.||+.++. .+-.+++...+.++.-+ ....|-.-. ..+...+++++..|+...++++ .-+|--+.|+||++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~ik--~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNIK--SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGGG--GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHHH--hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEEE
Confidence 58888866 55566666556555543 232222211 2678999999999988876555 24788899999999
Q ss_pred CCCCceEEeecccccccCCCCCcceeeccccCCcccCccccCCCCcCcccchhhHhHHHHHHhcCCCCCCcC
Q 036011 817 DEDMVAHVSDFGLSKLFDEGDDSVTQTMTIATIGYMAPEYGTEGIVSSKCDVYSYGVLLTETFTRKKPTDDM 888 (977)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 888 (977)
+.++.+++.-.|+-..+.+ . .++...=.-.+=+++..+++++..|++.
T Consensus 113 ~~~~~p~i~~RGik~~l~P-------------------~-----~~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVVDP-------------------L-----PVSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp CTTSCEEESCCEETTTBSC-------------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred cCCCCEEEEEccCccCCCC-------------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999987776443322 1 1122222345667888899998887653
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=70.46 E-value=0.52 Score=53.18 Aligned_cols=61 Identities=8% Similarity=0.028 Sum_probs=18.0
Q ss_pred CcCccccCcceEEEEEEEeCC-CCEEEE------EEeeccc--hhhHHHHHHHHHHHHhcCCCCcceEeeeee
Q 036011 686 NECNLLGRGSFGSVYKGTFSD-GTSFAI------KVFNLQL--DRAFRSFDSECEVLRNVRHRNLIKIFSSCC 749 (977)
Q Consensus 686 ~~~~~lg~G~~g~V~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 749 (977)
.+.+.+| ||.||+|.+.. ..+||| |..+... ......|.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3445676 99999999864 467888 6554321 223456888999999999999999987753
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.13 E-value=44 Score=28.18 Aligned_cols=38 Identities=16% Similarity=0.092 Sum_probs=14.7
Q ss_pred CccccCcccCceEEccCCCCCCCCccccccccccCeeeC
Q 036011 462 PSSFWSLEYLLAVNLSSNSLSGSLPSNIQNLQVLINLDL 500 (977)
Q Consensus 462 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 500 (977)
...|.++++|+.+.+-.+ ++.+-..+|.++.+|+.+.+
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 333444444444444332 22233334444444444443
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.33 E-value=89 Score=26.21 Aligned_cols=12 Identities=0% Similarity=0.044 Sum_probs=4.5
Q ss_pred hhhccCCCCEEE
Q 036011 392 TVGRLEQLQGLS 403 (977)
Q Consensus 392 ~~~~l~~L~~L~ 403 (977)
+|.++++|+.+.
T Consensus 15 aF~~c~~L~~i~ 26 (100)
T 2lz0_A 15 LFAGNTVIREIT 26 (100)
T ss_dssp TTTTCTTCCCEE
T ss_pred HhcCCCCCcEEE
Confidence 333333333333
No 453
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=28.36 E-value=7.1e+02 Score=28.42 Aligned_cols=46 Identities=20% Similarity=0.133 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCeEeCCCCCCceeeCCCCceEEeeccccc
Q 036011 779 LLERLNIMIGVA--LALEYLHHGHSTPVVHCDLKPSNILLDEDMVAHVSDFGLSK 831 (977)
Q Consensus 779 ~~~~~~i~~~i~--~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 831 (977)
+..+..++..+| ..+.|+= . -||=.++|||++.+|++.=+|||.+.
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL---G----igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL---G----VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---T----CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee---e----ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 455555555544 3455553 1 35778999999999999999999874
No 454
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=22.73 E-value=1.5e+02 Score=30.98 Aligned_cols=137 Identities=18% Similarity=0.171 Sum_probs=69.0
Q ss_pred cCccccCcceEEEEEEEeCCCCEEEEEEeeccchhhHHHHHHHHHHHHhcCCCCcceEeee-------------------
Q 036011 687 ECNLLGRGSFGSVYKGTFSDGTSFAIKVFNLQLDRAFRSFDSECEVLRNVRHRNLIKIFSS------------------- 747 (977)
Q Consensus 687 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------------------- 747 (977)
.++..-.|..|.++-.. ++..|+||-.. .-..+.+-.++...=.+.-|...-+.-.
T Consensus 73 ~I~~s~~Gstgvff~~t--d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 73 GIERSEKGTEGLFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EEEECCSTTSCEEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSC
T ss_pred EEEeccCCCCCeEEEEe--CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhH
Confidence 34455566655444444 57889999441 2223334444444444555553222111
Q ss_pred ---eecCCeeEEEEeccCCCCHHHHhhcC-CccCCHHHHHHHHHHH--HHHHHHHHhcCCC-CeEe-CCCCCCceeeCCC
Q 036011 748 ---CCNNDFRALVLELMPNGSLEKWLYSD-NYFLDLLERLNIMIGV--ALALEYLHHGHST-PVVH-CDLKPSNILLDED 819 (977)
Q Consensus 748 ---~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i--~~~L~~LH~~~~~-~ivH-~dlk~~NIll~~~ 819 (977)
........++|||.+|..|...-... ...+.... +.++ .-+++.+.+...+ +.+. .-=.+.|||++++
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 00122456999999876655421110 00122222 2332 2345555533222 2221 2257899999865
Q ss_pred Cc-eEEeecccccc
Q 036011 820 MV-AHVSDFGLSKL 832 (977)
Q Consensus 820 ~~-~kl~Dfgla~~ 832 (977)
+. +.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 54 88999998864
Done!