BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036018
(89 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
Length = 191
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 26 DKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKEL--VIYAAR 83
D DG G +S EL AA ++G+ FS + LH D NH G I DE K+L I + R
Sbjct: 37 DTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMR 96
Query: 84 WGF 86
GF
Sbjct: 97 EGF 99
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 18 MKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKEL 77
M+ ++ D GDGRL E++AA +SG S + + D G +G D+ EL
Sbjct: 95 MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVEL 154
Query: 78 VIYAAR 83
I+ R
Sbjct: 155 SIFVCR 160
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 9 GSIA---LSEDH--MKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADS 63
GSI LS+D +KVL K D DGDG+L+K+E+ + F+ G+ + + AD+
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADA 118
Query: 64 NHDGFIGNDEMKEL 77
N DG+I +E E
Sbjct: 119 NGDGYITLEEFLEF 132
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 9 GSIA---LSEDH--MKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADS 63
GSI LS+D +KVL K D DGDG+L+K+E+ + F+ G+ + + AD+
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADA 118
Query: 64 NHDGFIGNDEMKEL 77
N DG+I +E E
Sbjct: 119 NGDGYITLEEFLEF 132
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 18 MKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKE 76
+KVL K D DGDG+L+K+E+ + F+ G+ + + AD+N DG+I +E E
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEFLE 61
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 16 DHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
D M+ + KR+D +GDG++S EL A R G S +R + D++ DGFI
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFI 55
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 16 DHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
D M+ + KR+D +GDG++S EL A R G S +R + D++ DGFI
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFI 54
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKEL 77
+ KR+D +GDG++S EL A + G + RR + D++ DGFI DE +
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 10 SIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+I LS + M+ K +DKDG G++S KEL F + + D+N DG +
Sbjct: 411 TILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEV 470
Query: 70 GNDEMKELV 78
+E E++
Sbjct: 471 DFNEFVEML 479
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 15 EDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
ED + L+ D DG G + E A+ + + S R RA D + G I E+
Sbjct: 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKEL 439
Query: 75 KEL 77
+L
Sbjct: 440 FKL 442
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 18 MKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
+K+L K D DGDG+L+K+E+ F+ G + + AD+N DG+I +E
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFGYE----KVVDQIMKADANGDGYITLEE 128
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + L + +D++ DG + +EL FR SG H + + D N+DG I DE
Sbjct: 91 SEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
YDKDGDG ++ KEL R+ GL+ + + ++ D++ +G I
Sbjct: 19 YDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + + +D++ DG + +EL FR SG H + + D N+DG I DE
Sbjct: 91 SEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 13 LSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGL-HFSGFRARRALHHADSNHDGFIGN 71
LS+D ++ +++D+DG+G++S EL + F GL H + + DSN+DG +
Sbjct: 423 LSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTWKEMISGIDSNNDGDVDF 479
Query: 72 DEMKELV 78
+E +++
Sbjct: 480 EEFCKMI 486
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 13 LSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGL-HFSGFRARRALHHADSNHDGFIGN 71
LS+D ++ +++D+DG+G++S EL + F GL H + + DSN+DG +
Sbjct: 140 LSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTWKEMISGIDSNNDGDVDF 196
Query: 72 DEMKELV 78
+E +++
Sbjct: 197 EEFCKMI 203
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
+E+ M+ K +D+DGDG +S EL+ N G + + AD + DG I +E
Sbjct: 81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEE 140
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/44 (25%), Positives = 26/44 (59%)
Query: 24 RYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDG 67
++DK+G G+++ +EL R G + + + + A++N++G
Sbjct: 18 QFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNG 61
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ DG I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 432
Query: 74 MKELV 78
+++
Sbjct: 433 FVQMM 437
Score = 33.9 bits (76), Expect = 0.026, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKELVIYAAR 83
+DKDGDG ++ KEL R+ G + + + ++ D++ DG I + E +I AR
Sbjct: 311 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI---DFPEFLIMMAR 366
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 34.7 bits (78), Expect = 0.016, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 74 MKELV 78
+++
Sbjct: 442 FVQMM 446
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ DG I
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 34.7 bits (78), Expect = 0.016, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 74 MKELV 78
+++
Sbjct: 442 FVQMM 446
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 34.7 bits (78), Expect = 0.016, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 74 MKELV 78
+++
Sbjct: 441 FVQMM 445
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ DG I
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 34.7 bits (78), Expect = 0.016, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 74 MKELV 78
+++
Sbjct: 408 FVQMM 412
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 286 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 34.7 bits (78), Expect = 0.016, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 74 MKELV 78
+++
Sbjct: 441 FVQMM 445
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ DG I
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 34.7 bits (78), Expect = 0.016, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 74 MKELV 78
+++
Sbjct: 408 FVQMM 412
Score = 30.0 bits (66), Expect = 0.37, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 286 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ +K + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 78 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 137
Query: 74 MKELVI 79
++++
Sbjct: 138 FVQVMM 143
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 16 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 74 MKELV 78
+++
Sbjct: 442 FVQMM 446
Score = 30.0 bits (66), Expect = 0.39, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 442
Query: 74 MKELV 78
+++
Sbjct: 443 FVQMM 447
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 321 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 74 MKELV 78
+++
Sbjct: 442 FVQMM 446
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 74 MKELV 78
+++
Sbjct: 442 FVQMM 446
Score = 34.3 bits (77), Expect = 0.021, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKELVIYAARW 84
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I + E + ARW
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI---DFPEFLTMMARW 376
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 345 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 404
Query: 74 MKELV 78
+++
Sbjct: 405 FVQMM 409
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 283 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ DG I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 MKELV 78
+++
Sbjct: 141 FVQMM 145
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ +K + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 74 MKELVI 79
++++
Sbjct: 141 FVQVMM 146
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 34.3 bits (77), Expect = 0.018, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 74 MKELV 78
+++
Sbjct: 441 FVQMM 445
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ DG I
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 7 RNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHD 66
++ S SE+ + L + +DK+ DG + +EL+ + +G + + D N+D
Sbjct: 86 KDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 67 GFIGNDEMKELV 78
G I DE E +
Sbjct: 146 GRIDYDEFLEFM 157
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ +K + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 74 MKELVI 79
++++
Sbjct: 141 FVQVMM 146
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 MKELVIYAA 82
+++ A
Sbjct: 142 FVQMMTAKA 150
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 10 SIALSEDHMKVL---LKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHD 66
+ + ED ++ + K +D+DG+G +SK+EL A R+ G + + D + D
Sbjct: 27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGD 86
Query: 67 GFIGNDEMKELV 78
G + +E L+
Sbjct: 87 GQVDFEEFVTLL 98
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLH---FSGFRARRALHHADSNHDGFIG 70
++ +K + + DKD G + ++EL+ + H + + L DS+HDG IG
Sbjct: 39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIG 98
Query: 71 NDEMKELVIYA 81
DE ++V A
Sbjct: 99 ADEFAKMVAQA 109
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 1 MPFYVPRNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHH 60
M ++ S +E+ + L + +DK+ DG + +EL+ + +G + +
Sbjct: 80 MMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKD 139
Query: 61 ADSNHDGFIGNDEMKELV 78
D N+DG I DE E +
Sbjct: 140 GDKNNDGRIDYDEFLEFM 157
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DK+ DG + +EL R +G H + + +D N+DG I DE
Sbjct: 94 SEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + + AD + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEE 141
Query: 74 MKELV 78
+++
Sbjct: 142 FVQMM 146
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
+DKDG G ++ E +A R SG+ S + H D ++ G + DEM
Sbjct: 122 FDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEM 171
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + L + +DK+ DG + +EL+ + +G + + D N+DG I DE
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 74 MKELV 78
E +
Sbjct: 63 FLEFM 67
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + L + +DK+ DG + +EL+ + +G + + D N+DG I DE
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 74 MKELV 78
E +
Sbjct: 65 FLEFM 69
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 MKELV 78
+++
Sbjct: 142 FVQMM 146
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 74 MKELV 78
+++
Sbjct: 63 FVQMM 67
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.1 bits (74), Expect = 0.036, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 13 LSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGND 72
LS + ++ + +D D G++S EL F S + +++ L D N+DG + D
Sbjct: 415 LSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKS--VLSEVDKNNDGEVDFD 472
Query: 73 EMKELVI 79
E +++++
Sbjct: 473 EFQQMLL 479
Score = 26.2 bits (56), Expect = 5.3, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 9 GSIALSEDHMKVL---LKRYDKDGDGRLSKKELQAAFR 43
GS S+D K L + DK+GDG+L + EL ++
Sbjct: 325 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYK 362
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 7 RNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHD 66
++ S SE+ + L + +DK+ DG + EL+ + +G + + D N+D
Sbjct: 86 KDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 67 GFIGNDEMKELV 78
G I DE E +
Sbjct: 146 GRIDYDEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 7 RNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHD 66
++ S SE+ + L + +DK+ DG + EL+ + +G + + D N+D
Sbjct: 86 KDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 67 GFIGNDEMKELV 78
G I DE E +
Sbjct: 146 GRIDYDEXLEFM 157
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ +K + +DKD +G +S EL+ N G + + AD + DG I DE
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDE 141
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 13 LSEDHM---KVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
L+ED + K +DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 7 RNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHD 66
++ S +E+ + L + +DK+ DG + +EL+ + +G + + D N+D
Sbjct: 86 KDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 67 GFIGNDEMKELV 78
G I DE E +
Sbjct: 146 GRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 7 RNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHD 66
++ S SE+ + L + +DK+ DG + EL+ + +G + + D N+D
Sbjct: 86 KDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 67 GFIGNDE 73
G I DE
Sbjct: 146 GRIDYDE 152
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 78 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 137
Query: 74 MKELV 78
+++
Sbjct: 138 FVQMM 142
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 16 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.1 bits (74), Expect = 0.038, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 13 LSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGND 72
LS + ++ + +D D G++S EL F S + +++ L D N+DG + D
Sbjct: 438 LSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKS--VLSEVDKNNDGEVDFD 495
Query: 73 EMKELVI 79
E +++++
Sbjct: 496 EFQQMLL 502
Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 9 GSIALSEDHMKVL---LKRYDKDGDGRLSKKELQAAFR 43
GS S+D K L + DK+GDG+L + EL ++
Sbjct: 348 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYK 385
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 74 MKELV 78
+++
Sbjct: 139 FVQMM 143
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 77 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 136
Query: 74 MKELV 78
+++
Sbjct: 137 FVQMM 141
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 15 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 59
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.1 bits (74), Expect = 0.039, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 13 LSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGND 72
LS + ++ + +D D G++S EL F S + +++ L D N+DG + D
Sbjct: 439 LSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKS--VLSEVDKNNDGEVDFD 496
Query: 73 EMKELVI 79
E +++++
Sbjct: 497 EFQQMLL 503
Score = 25.8 bits (55), Expect = 5.7, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 9 GSIALSEDHMKVL---LKRYDKDGDGRLSKKELQAAFR 43
GS S+D K L + DK+GDG+L + EL ++
Sbjct: 349 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYK 386
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 74 MKELV 78
+++
Sbjct: 63 FVQMM 67
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 74 MKELV 78
+++
Sbjct: 139 FVQMM 143
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 74 MKELV 78
+++
Sbjct: 139 FVQMM 143
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 MKELV 78
+++
Sbjct: 142 FVQMM 146
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 MKELV 78
+++
Sbjct: 141 FVQMM 145
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 MKELV 78
+++
Sbjct: 142 FVQMM 146
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 83 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 142
Query: 74 MKELV 78
+++
Sbjct: 143 FVQMM 147
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 21 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 85 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 144
Query: 74 MKELV 78
+++
Sbjct: 145 FVQMM 149
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 23 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 67
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 87 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 146
Query: 74 MKELV 78
+++
Sbjct: 147 FVQMM 151
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 25 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 MKELV 78
+++
Sbjct: 141 FVQMM 145
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 MKELV 78
+++
Sbjct: 142 FVQMM 146
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 MKELV 78
+++
Sbjct: 141 FVQMM 145
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 7 RNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHD 66
++ S +E+ + L + +DK+ DG + +EL+ + +G + + D N+D
Sbjct: 6 KDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 65
Query: 67 GFIGNDEMKELV 78
G I DE E +
Sbjct: 66 GRIDYDEFLEFM 77
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 74 MKELV 78
+++
Sbjct: 66 FVQMM 70
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 74 MKELV 78
+++
Sbjct: 64 FVQMM 68
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 80 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 139
Query: 74 MKELV 78
+++
Sbjct: 140 FVQMM 144
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 18 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 74 MKELV 78
+++
Sbjct: 67 FVQMM 71
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + L + +DK+ DG + EL+ + +G + + D N+DG I DE
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 74 MKELV 78
E +
Sbjct: 64 FLEFM 68
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + + +DK+ DG + +EL R +G H + + +D N+DG I DE
Sbjct: 91 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 150
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + + +DK+ DG + +EL R +G H + + +D N+DG I DE
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + + +DK+ DG + +EL R +G H + + +D N+DG I DE
Sbjct: 94 SEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 7 RNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHD 66
++ S +E+ + L + +DK+ DG + +EL+ + +G + + D N+D
Sbjct: 1 KDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 60
Query: 67 GFIGNDEMKELV 78
G I DE E +
Sbjct: 61 GRIDYDEFLEFM 72
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 32.7 bits (73), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKEL 77
+ KR+D +GDG++S EL A + G + + + D++ DGFI E +
Sbjct: 14 IFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEFTDF 69
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 32.3 bits (72), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + +D + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEE 141
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 15 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 59
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 31/63 (49%)
Query: 16 DHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMK 75
+ ++ + +DKDG+G +S EL+ N G + + A+ + DG + +E
Sbjct: 78 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 137
Query: 76 ELV 78
+++
Sbjct: 138 QMM 140
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Score = 32.3 bits (72), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + A+ + DG + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEE 140
Query: 74 MKELV 78
+++
Sbjct: 141 FVQMM 145
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Score = 32.3 bits (72), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 79 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + K +D+DG+G +S EL+ N G + + AD + DG I +E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 74 MKELVI 79
+++
Sbjct: 141 FVRMMV 146
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + K +D+DG+G +S EL+ N G + + AD + DG I +E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 74 MKELVI 79
+++
Sbjct: 141 FVRMMV 146
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 13 LSEDHM---KVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
L+E+ + K +DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Score = 32.0 bits (71), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.0 bits (71), Expect = 0.083, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 13 LSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGND 72
LS + ++ + +D D G++S EL F S + +++ L D N+DG + D
Sbjct: 415 LSRERLERAFRXFDSDNSGKISSTELATIFGVSDVDSETWKS--VLSEVDKNNDGEVDFD 472
Query: 73 EMKELVI 79
E ++ ++
Sbjct: 473 EFQQXLL 479
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 9 GSIALSEDHMKVL---LKRYDKDGDGRLSKKELQAAF----RNSGLHFSGFRARRALHHA 61
GS S+D K L + DK+GDG+L + EL + R G S A H
Sbjct: 325 GSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEV 384
Query: 62 DSNHDG 67
D D
Sbjct: 385 DQVLDA 390
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 32.0 bits (71), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + K +D+DG+G +S EL+ N G + + AD + DG I +E
Sbjct: 6 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 65
Query: 74 MKELVI 79
+++
Sbjct: 66 FVRMMV 71
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 32.0 bits (71), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + + AD + DG + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEE 141
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 7 RNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHD 66
++ S SE+ + L + DK+ DG + EL+ + +G + + D N+D
Sbjct: 86 KDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 67 GFIGNDEMKELV 78
G I DE E +
Sbjct: 146 GRIDYDEFLEFM 157
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 15 EDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
E+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 75 KELV 78
+++
Sbjct: 61 VQMM 64
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ +K + +DKD +G +S EL+ N G + + AD + DG I +E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 20 FDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ +K + +DKD +G +S EL+ N G + + AD + DG I +E
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + +DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ KEL R+ G + + + ++ D++ +G I
Sbjct: 19 FDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 15 EDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
EDH+ +DKDG G ++ ELQ A G+ R D ++DG I +E
Sbjct: 98 EDHLFAAFTYFDKDGSGYITPDELQQACEEFGVE--DVRIEELXRDVDQDNDGRIDYNEF 155
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + DKDG+G +S EL+ N G + + AD + DG + +E
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Query: 74 MKELV 78
+++
Sbjct: 87 FVQMM 91
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + + +DK+ DG + +EL R +G H + +D N+DG I DE
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 4 YVPRNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQ---AAFRNSGLHFSGFRARRALHH 60
+ +G +S +K + + D D G L EL+ F++ + + +
Sbjct: 29 FFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDA 88
Query: 61 ADSNHDGFIGNDEMKELV 78
AD++ DG IG DE +E+V
Sbjct: 89 ADNDGDGKIGADEFQEMV 106
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ + + +DK+ DG + +EL R +G H + +D N+DG I DE
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 6 PRNGSIALSEDHMKVLLKRYD---KDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHAD 62
+ G + L+E+ + + + +D DG G + KEL+ A R G ++ + D
Sbjct: 15 QKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEID 74
Query: 63 SNHDGFIGNDEMKELVIYAARWG 85
+ G I +E L + A+ G
Sbjct: 75 KDGSGTIDFEEF--LTMMTAKMG 95
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
+D D G ++ K+L+ + G + + + + AD N D I DE
Sbjct: 110 FDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 158
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 30.8 bits (68), Expect = 0.22, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 9 GSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGF 68
G + E+ + +LK D D +G + E + + + FS R RRA + D++ G
Sbjct: 392 GELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGK 451
Query: 69 IGNDEMKEL 77
I +E+ L
Sbjct: 452 ITKEELANL 460
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 11 IALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIG 70
I SE+ ++ +D D G+++K+EL F + + + L AD N D I
Sbjct: 430 ILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTW--NDVLGEADQNKDNMID 487
Query: 71 NDEMKELV 78
DE ++
Sbjct: 488 FDEFVSMM 495
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 21 LLKRYDKDGDGRLSKKEL 38
+ K+ DK+GDG+L KKEL
Sbjct: 360 IFKKLDKNGDGQLDKKEL 377
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 4 YVPRNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQ---AAFRNSGLHFSGFRARRALHH 60
+ +G +S + +K + + D D G L ++EL+ F + + + +
Sbjct: 30 FFQTSGLSKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAA 89
Query: 61 ADSNHDGFIGNDEMKELV 78
AD++ DG IG +E +E+V
Sbjct: 90 ADNDGDGKIGAEEFQEMV 107
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
+DKDG G ++ E +A + SG+ S H D ++ G + DEM
Sbjct: 122 FDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
SE+ ++ + +DKDG+G +S +L+ N G + + AD + DG +
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 60
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
+DKDG G ++ E +A + SG+ S H D ++ G + DEM
Sbjct: 122 FDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 16 DHMKVLLKRYDKDGDGRLSKKELQAAFRN---SGLHFSGFRARRALHHADSNHDGFIGND 72
D +K + D+D G + ++ELQ +N S + + L D++ DG IG +
Sbjct: 42 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 101
Query: 73 EMKELV 78
E + LV
Sbjct: 102 EFQSLV 107
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 15 EDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
ED L +DKD +G + +E + + A D NHDG+I DEM
Sbjct: 62 EDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEM 121
Query: 75 KELV 78
+V
Sbjct: 122 LTIV 125
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSG 46
S D ++ + +DKD DG++S +EL +A R+ G
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLG 35
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
+DKDG G ++ E +A + SG+ S H D ++ G + DEM
Sbjct: 122 FDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 16 DHMKVLLKRYDKDGDGRLSKKELQAAFRN---SGLHFSGFRARRALHHADSNHDGFIGND 72
D +K + D+D G + ++ELQ +N S + + L D++ DG IG +
Sbjct: 41 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 100
Query: 73 EMKELV 78
E + LV
Sbjct: 101 EFQSLV 106
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 5 VPRNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSN 64
V + + LS + + +++D DG G+++ +EL F + + + + L D N
Sbjct: 112 VCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETW--HQVLQECDKN 169
Query: 65 HDGFIGNDEMKELV 78
+DG + +E E++
Sbjct: 170 NDGEVDFEEFVEMM 183
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
+DKDG G +S E + SG+ S A + H D ++ G + DEM
Sbjct: 125 FDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEM 174
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 30.0 bits (66), Expect = 0.37, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 11 IALSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIG 70
+ LS + + +++D DG G+++ +EL F + + + + L D N+DG +
Sbjct: 392 LLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETW--HQVLQECDKNNDGEVD 449
Query: 71 NDEMKELV 78
+E E++
Sbjct: 450 FEEFVEMM 457
Score = 26.2 bits (56), Expect = 5.1, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFR 43
+ ++ D +GDG+L +KEL +R
Sbjct: 319 IFRQLDNNGDGQLDRKELIEGYR 341
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 7 RNGSIALSEDHMKVLLKRYD---KDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADS 63
+ G + L+E+ + + + +D DG G + KEL+ A R G ++ + D
Sbjct: 18 KKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDK 77
Query: 64 NHDGFIGNDE 73
+ G I +E
Sbjct: 78 DGSGTIDFEE 87
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 30.0 bits (66), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 16 DHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMK 75
+ ++V + +D+DGDG ++ EL+ A G + AD + DG + +E
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 76 ELV 78
++
Sbjct: 66 RML 68
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
+DKDG G ++ E +A + SG+ S H D + G + DEM
Sbjct: 122 FDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEM 171
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEM 74
+DKDG G ++ E +A + SG+ S H D ++ G + DEM
Sbjct: 122 FDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEM 171
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
+E+ ++ + +DKDG+G +S EL+ G S + AD++ DG + +E
Sbjct: 81 NEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEE 140
Query: 74 MKELVI 79
+++
Sbjct: 141 FVRVLV 146
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
+DKDGDG ++ +EL R+ G + + R + D + +G +
Sbjct: 19 FDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKELV 78
+DKDGDG ++ +EL R+ + + + + D++ +G I DE L+
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKELV 78
+DKDGDG ++ +EL R+ + + + + D++ +G I DE L+
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
+DKDGDG ++ +EL R+ + + + + D++ +G I DE
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDE 67
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 2 PFYVPRNGSIALSEDHMKV----LLKRYDKDGDGRLSKKE 37
F V + ALS+D +K L+K DK+ DG++SK+E
Sbjct: 31 TFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEE 70
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFRNSGLHFS 50
+ KR+D D G + EL AF +G H +
Sbjct: 93 IYKRFDTDRSGTIGSNELPGAFEAAGFHLN 122
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFRNSGLHFS 50
+ KR+D D G + EL AF +G H +
Sbjct: 93 IYKRFDTDRSGTIGSNELPGAFEAAGFHLN 122
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKELVIYAARW 84
+D DG G + KEL+ A R G ++ + D + G I +E L + A+
Sbjct: 17 FDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEF--LQMMTAKM 74
Query: 85 G 85
G
Sbjct: 75 G 75
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFRNSGLHFS 50
+ KR+D D G + EL AF +G H +
Sbjct: 89 IYKRFDTDRSGTIGSNELPGAFEAAGFHLN 118
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFRNSGLHFS 50
+ KR+D D G + EL AF +G H +
Sbjct: 82 IYKRFDTDRSGTIGSNELPGAFEAAGFHLN 111
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 4 YVPRNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQ---AAFRNSGLHFSGFRARRALHH 60
+ + G + S D +K D+D G + + EL+ F+ + + L
Sbjct: 30 FFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKA 89
Query: 61 ADSNHDGFIGNDEMKELV 78
DS+ DG IG DE LV
Sbjct: 90 GDSDGDGKIGVDEFTALV 107
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 19 KVLLKRYDKDGDGRLSKKELQAAFRNSGLHFS 50
+ + K++D D G + EL AF +G H +
Sbjct: 91 QAIYKQFDTDRSGTICSSELPGAFEAAGFHLN 122
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 16 DHMKVLLKRYDKDGDGRLSKKEL------QAAF--RNSGLHFSGFRARRALHHADSNHDG 67
++ ++LK +D + DG+L E+ Q F + G+ G +A D + +G
Sbjct: 147 EYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNG 206
Query: 68 FIGNDEMKELV 78
+I +E+ L+
Sbjct: 207 YIDENELDALL 217
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDEMKELV 78
+D++ DGR+ E A + + R A D ++DG+I +EM ++V
Sbjct: 72 FDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV 125
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSG 46
SE+ ++ + +DKDG+G +S EL+ N G
Sbjct: 36 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFRNSGLHFS 50
+ KR++ D G + EL AF +G H +
Sbjct: 809 IYKRFETDRSGTIGSNELPGAFEAAGFHLN 838
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 5 VPRNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQA 40
V + G+ AL++ K LK D DGDG + +E A
Sbjct: 70 VFKAGARALTDAETKAFLKAGDSDGDGAIGVEEWVA 105
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 5 VPRNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQA 40
V + G+ AL++ K LK D DGDG + +E A
Sbjct: 69 VFKAGARALTDAETKAFLKAGDSDGDGAIGVEEWVA 104
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 9/36 (25%), Positives = 23/36 (63%)
Query: 13 LSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLH 48
L+++ ++ ++ D+DGDG +S++E + + L+
Sbjct: 54 LTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY 89
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFRN-SGLHFSGFRARRALHHADSNHDGFIGNDEMKELVI 79
+ +R DKD G +S ELQ A N + F+ R + D + + E +
Sbjct: 31 VFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 90
Query: 80 YAARW 84
Y W
Sbjct: 91 YITDW 95
>pdb|3RIB|A Chain A, Human Lysine Methyltransferase Smyd2 In Complex With
Adohcy
pdb|3RIB|B Chain B, Human Lysine Methyltransferase Smyd2 In Complex With
Adohcy
Length = 441
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 57 ALHHADSNHDGFIGNDEMKELVIYAARWGFTVK 89
ALHH S H GF ND + L GFT++
Sbjct: 155 ALHHFYSKHLGFPDNDSLVVLFAQVNCNGFTIE 187
>pdb|3TG4|A Chain A, Structure Of Smyd2 In Complex With Sam
pdb|3TG5|A Chain A, Structure Of Smyd2 In Complex With P53 And Sah
Length = 433
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 57 ALHHADSNHDGFIGNDEMKELVIYAARWGFTVK 89
ALHH S H GF ND + L GFT++
Sbjct: 155 ALHHFYSKHLGFPDNDSLVVLFAQVNCNGFTIE 187
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 21 LLKRYDKDGDGRLSKKELQAAFRN-SGLHFSGFRARRALHHADSNHDGFIGNDEMKELVI 79
+ +R DKD G +S ELQ A N + F+ R + D + + E +
Sbjct: 30 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 89
Query: 80 YAARW 84
Y W
Sbjct: 90 YITDW 94
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 31/65 (47%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
SE+ ++ + + KDG+G +S +L+ N G + + A + DG + ++
Sbjct: 382 SEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQ 441
Query: 74 MKELV 78
+++
Sbjct: 442 FVQMM 446
Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 25 YDKDGDGRLSKKELQAAFRNSG 46
+DKDGDG ++ K+L R+ G
Sbjct: 320 FDKDGDGGITTKQLGTVMRSLG 341
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 14 SEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSG 46
SED ++ + +D +G G + K LQ A N G
Sbjct: 77 SEDILRQAFRTFDPEGTGYIPKAALQDALLNLG 109
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 25 YDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFIGNDE 73
+D D G ++ K+L+ + G + + + + AD N D I DE
Sbjct: 18 FDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 13 LSEDHMKVLLKRYDKDGDGRLSKKELQ 39
L++ K LK DKDGDG++ E +
Sbjct: 78 LTDAETKAFLKAADKDGDGKIGIDEFE 104
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 14/63 (22%)
Query: 15 EDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRAL----------HHADSN 64
E +K K YD DG+G + K EL F + ++ L H D N
Sbjct: 92 EQKLKWYFKLYDADGNGSIDKNELLDMF----MAVQALNGQQTLSPEEFINLVFHKIDIN 147
Query: 65 HDG 67
+DG
Sbjct: 148 NDG 150
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 12 ALSEDHMKVLLKRYDKDGDGRLSKKELQA 40
AL++ K LK D DGDG++ E A
Sbjct: 76 ALTDGETKTFLKAGDSDGDGKIGVDEWTA 104
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 25.8 bits (55), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 5 VPRNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQA 40
V G+ AL++ K LK D DGDG + E A
Sbjct: 70 VFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAA 105
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 12 ALSEDHMKVLLKRYDKDGDGRLSKKELQA 40
AL++ K LK D DGDG++ E A
Sbjct: 76 ALTDGETKTFLKAGDSDGDGKIGVDEWTA 104
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 7 RNGSIALSEDHMKVLLKRYDKDGDGRLSKKELQ 39
+G+ L+ K L D DGDG++ +E Q
Sbjct: 71 ESGARVLTASETKTFLAAADHDGDGKIGAEEFQ 103
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 15 EDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
E+++ +DKDG G ++ E+Q A ++ GL + D ++DG I
Sbjct: 81 EENLVSAFSYFDKDGSGYITLDEIQQACKDFGL--DDIHIDDMIKEIDQDNDGQI 133
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 13 LSEDHMKVLLKRYDKDGDGRLSKKELQAAFRNSGL 47
L+++ ++ ++ D+DGDG +S++E + + L
Sbjct: 44 LTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSL 78
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 13 LSEDHM---KVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
LSE+ + K +D DG G +S KEL R G + + + D + G I
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 70 GNDE 73
+E
Sbjct: 74 DFEE 77
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 25.0 bits (53), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 13 LSEDHM---KVLLKRYDKDGDGRLSKKELQAAFRNSGLHFSGFRARRALHHADSNHDGFI 69
LSE+ + K +D DG G +S KEL R G + + + D + G I
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 70 GNDE 73
+E
Sbjct: 63 DFEE 66
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,873,062
Number of Sequences: 62578
Number of extensions: 98326
Number of successful extensions: 723
Number of sequences better than 100.0: 186
Number of HSP's better than 100.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 344
Number of HSP's gapped (non-prelim): 319
length of query: 89
length of database: 14,973,337
effective HSP length: 56
effective length of query: 33
effective length of database: 11,468,969
effective search space: 378475977
effective search space used: 378475977
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)