Query 036024
Match_columns 272
No_of_seqs 114 out of 1622
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 08:40:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036024.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036024hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 3.1E-47 6.7E-52 327.0 25.7 261 4-272 114-389 (393)
2 PRK07590 L,L-diaminopimelate a 100.0 1.6E-43 3.4E-48 308.5 27.9 268 4-272 123-409 (409)
3 PRK07681 aspartate aminotransf 100.0 1.3E-43 2.9E-48 308.1 26.2 258 4-270 118-384 (399)
4 PRK07366 succinyldiaminopimela 100.0 2.4E-43 5.2E-48 305.6 25.2 260 4-272 117-388 (388)
5 TIGR03542 DAPAT_plant LL-diami 100.0 3.5E-42 7.5E-47 299.4 28.2 269 4-272 119-402 (402)
6 PLN00175 aminotransferase fami 100.0 1.4E-42 3.1E-47 302.1 25.8 259 4-272 140-411 (413)
7 PRK08636 aspartate aminotransf 100.0 2.5E-42 5.5E-47 300.4 27.3 260 4-272 120-398 (403)
8 PRK06348 aspartate aminotransf 100.0 2.2E-42 4.8E-47 299.0 26.3 259 4-271 114-382 (384)
9 PRK08068 transaminase; Reviewe 100.0 1.9E-42 4.2E-47 300.0 25.6 259 4-271 119-386 (389)
10 TIGR03540 DapC_direct LL-diami 100.0 4.2E-42 9.2E-47 297.4 26.3 258 4-270 116-382 (383)
11 PRK09276 LL-diaminopimelate am 100.0 8.6E-42 1.9E-46 295.7 26.7 258 4-270 118-384 (385)
12 PRK07682 hypothetical protein; 100.0 3.6E-42 7.7E-47 297.4 23.8 260 4-272 106-374 (378)
13 PRK06207 aspartate aminotransf 100.0 7.4E-42 1.6E-46 297.3 25.8 260 4-272 127-400 (405)
14 COG1168 MalY Bifunctional PLP- 100.0 8.1E-42 1.8E-46 278.3 24.1 262 4-272 108-384 (388)
15 PRK09148 aminotransferase; Val 100.0 1.7E-41 3.6E-46 295.2 25.8 260 4-272 117-388 (405)
16 PRK09147 succinyldiaminopimela 100.0 1.6E-41 3.5E-46 294.8 25.6 257 4-272 118-394 (396)
17 PRK05942 aspartate aminotransf 100.0 5.2E-41 1.1E-45 291.4 26.1 259 4-271 122-389 (394)
18 PLN02450 1-aminocyclopropane-1 100.0 3.6E-41 7.7E-46 296.8 25.1 260 4-272 136-428 (468)
19 PRK05839 hypothetical protein; 100.0 7.1E-41 1.5E-45 288.5 25.9 252 4-272 110-372 (374)
20 PRK07683 aminotransferase A; V 100.0 9.6E-41 2.1E-45 289.0 26.2 259 4-272 114-381 (387)
21 PRK06290 aspartate aminotransf 100.0 5.4E-41 1.2E-45 291.6 24.5 255 4-272 131-403 (410)
22 PRK12414 putative aminotransfe 100.0 9.6E-41 2.1E-45 288.7 25.4 257 4-271 115-384 (384)
23 KOG0257 Kynurenine aminotransf 100.0 4.5E-42 9.8E-47 282.4 16.1 259 4-270 118-415 (420)
24 PRK08960 hypothetical protein; 100.0 1.1E-40 2.5E-45 288.7 25.8 258 4-272 117-385 (387)
25 PRK09082 methionine aminotrans 100.0 5.1E-41 1.1E-45 290.7 23.3 258 4-271 116-386 (386)
26 PLN02376 1-aminocyclopropane-1 100.0 1.2E-40 2.5E-45 294.6 25.6 260 4-272 144-436 (496)
27 TIGR03538 DapC_gpp succinyldia 100.0 2.4E-40 5.2E-45 287.3 25.5 255 6-272 119-393 (393)
28 PRK07324 transaminase; Validat 100.0 3.7E-40 8.1E-45 283.8 25.9 255 4-272 105-368 (373)
29 PLN02607 1-aminocyclopropane-1 100.0 2.8E-40 6.2E-45 289.1 25.3 260 4-272 145-435 (447)
30 PRK07337 aminotransferase; Val 100.0 4.6E-40 1E-44 285.1 25.7 258 4-272 115-387 (388)
31 PRK07309 aromatic amino acid a 100.0 4.8E-40 1E-44 285.0 25.8 257 4-272 116-386 (391)
32 PRK08912 hypothetical protein; 100.0 3.2E-40 7E-45 286.0 24.7 259 4-272 112-384 (387)
33 TIGR03537 DapC succinyldiamino 100.0 4.9E-40 1.1E-44 281.1 24.9 254 4-270 88-349 (350)
34 PRK06855 aminotransferase; Val 100.0 4.6E-40 1E-44 288.1 25.1 266 4-272 120-427 (433)
35 PRK06108 aspartate aminotransf 100.0 7E-40 1.5E-44 283.6 25.5 260 4-272 109-380 (382)
36 PRK08175 aminotransferase; Val 100.0 5.8E-40 1.3E-44 284.9 24.4 260 4-272 116-387 (395)
37 PLN02187 rooty/superroot1 100.0 1.2E-39 2.5E-44 286.8 25.5 262 4-272 156-436 (462)
38 PRK15481 transcriptional regul 100.0 8E-40 1.7E-44 287.0 24.2 254 4-272 166-429 (431)
39 PRK05957 aspartate aminotransf 100.0 1.5E-39 3.2E-44 281.8 25.5 259 4-271 114-382 (389)
40 PLN00143 tyrosine/nicotianamin 100.0 1.3E-39 2.8E-44 283.5 25.2 264 4-272 122-402 (409)
41 PLN00145 tyrosine/nicotianamin 100.0 1.3E-39 2.9E-44 284.6 25.4 263 4-272 142-422 (430)
42 COG1167 ARO8 Transcriptional r 100.0 1E-39 2.2E-44 286.3 24.3 257 4-272 180-453 (459)
43 PTZ00377 alanine aminotransfer 100.0 2E-39 4.3E-44 287.6 25.9 260 4-272 164-473 (481)
44 PRK06107 aspartate aminotransf 100.0 2E-39 4.3E-44 282.1 24.8 258 4-272 118-398 (402)
45 PRK08361 aspartate aminotransf 100.0 1.6E-39 3.5E-44 281.9 24.0 259 4-272 118-388 (391)
46 TIGR01264 tyr_amTase_E tyrosin 100.0 3.6E-39 7.8E-44 280.6 25.1 263 4-272 120-397 (401)
47 PRK07777 aminotransferase; Val 100.0 3.9E-39 8.4E-44 279.2 25.1 259 4-271 110-383 (387)
48 PTZ00433 tyrosine aminotransfe 100.0 3.7E-39 7.9E-44 281.2 24.9 262 4-272 129-406 (412)
49 PRK13355 bifunctional HTH-doma 100.0 3.5E-39 7.6E-44 288.3 25.1 262 4-272 233-512 (517)
50 PRK06425 histidinol-phosphate 100.0 4E-39 8.6E-44 273.4 22.6 248 5-272 81-331 (332)
51 PLN02656 tyrosine transaminase 100.0 7.2E-39 1.6E-43 279.0 24.8 264 4-272 121-401 (409)
52 PLN02231 alanine transaminase 100.0 4.8E-39 1E-43 285.9 23.7 259 4-271 217-524 (534)
53 PRK05764 aspartate aminotransf 100.0 4.1E-38 9E-43 273.5 25.9 258 4-272 116-389 (393)
54 PRK08363 alanine aminotransfer 100.0 3.2E-38 6.9E-43 274.4 25.1 258 4-272 118-392 (398)
55 PRK07550 hypothetical protein; 100.0 4.3E-38 9.3E-43 272.6 25.7 258 4-271 115-384 (386)
56 TIGR01265 tyr_nico_aTase tyros 100.0 8.3E-38 1.8E-42 272.1 26.5 262 4-272 121-399 (403)
57 PRK06358 threonine-phosphate d 100.0 1.4E-37 2.9E-42 266.2 25.1 253 4-272 94-353 (354)
58 PRK07568 aspartate aminotransf 100.0 1.5E-37 3.2E-42 270.4 25.4 259 4-272 113-390 (397)
59 PRK07865 N-succinyldiaminopime 100.0 2.3E-37 5E-42 266.1 26.2 247 4-269 112-363 (364)
60 PRK09275 aspartate aminotransf 100.0 2.7E-38 5.9E-43 277.9 20.6 262 4-272 191-515 (527)
61 PRK09265 aminotransferase AlaT 100.0 1.8E-37 4E-42 270.1 25.5 264 4-272 120-399 (404)
62 PF00155 Aminotran_1_2: Aminot 100.0 4E-38 8.6E-43 270.9 18.7 252 4-268 94-363 (363)
63 TIGR03801 asp_4_decarbox aspar 100.0 1.5E-37 3.2E-42 272.9 21.0 262 4-272 185-514 (521)
64 TIGR03539 DapC_actino succinyl 100.0 8.5E-37 1.8E-41 261.8 25.2 247 4-269 106-357 (357)
65 PLN02397 aspartate transaminas 100.0 4.6E-37 9.9E-42 268.2 21.2 251 4-272 143-419 (423)
66 KOG0259 Tyrosine aminotransfer 100.0 5.4E-36 1.2E-40 242.9 24.7 261 6-271 153-430 (447)
67 PTZ00376 aspartate aminotransf 100.0 4.5E-37 9.7E-42 267.5 19.7 251 4-272 125-401 (404)
68 PRK07392 threonine-phosphate d 100.0 2.6E-36 5.6E-41 259.1 24.1 247 4-268 98-356 (360)
69 PRK09440 avtA valine--pyruvate 100.0 3.7E-36 8.1E-41 263.0 24.6 256 4-272 127-409 (416)
70 PRK04781 histidinol-phosphate 100.0 2.5E-36 5.4E-41 259.2 23.1 249 4-271 102-360 (364)
71 PLN02672 methionine S-methyltr 100.0 3.6E-36 7.8E-41 279.4 24.2 259 4-271 779-1077(1082)
72 COG0079 HisC Histidinol-phosph 100.0 3.1E-36 6.7E-41 254.8 21.0 245 4-272 100-352 (356)
73 PRK09257 aromatic amino acid a 100.0 3.5E-36 7.6E-41 261.4 21.4 251 4-272 121-396 (396)
74 PRK07908 hypothetical protein; 100.0 1.9E-35 4.1E-40 252.8 24.5 244 5-271 98-344 (349)
75 PRK14809 histidinol-phosphate 100.0 5.8E-36 1.3E-40 256.7 21.4 243 4-272 107-355 (357)
76 PRK08056 threonine-phosphate d 100.0 2.6E-35 5.7E-40 252.4 24.5 248 6-271 97-352 (356)
77 PRK03158 histidinol-phosphate 100.0 7.7E-36 1.7E-40 256.3 21.2 249 4-272 106-359 (359)
78 PRK06836 aspartate aminotransf 100.0 5.5E-35 1.2E-39 253.7 24.8 254 4-272 121-389 (394)
79 PRK01688 histidinol-phosphate 100.0 7E-36 1.5E-40 255.4 18.6 245 4-269 100-351 (351)
80 KOG0256 1-aminocyclopropane-1- 100.0 3.7E-35 8.1E-40 240.1 21.5 259 5-272 172-459 (471)
81 PRK08637 hypothetical protein; 100.0 2.6E-35 5.7E-40 255.1 21.4 255 4-272 94-384 (388)
82 PRK01533 histidinol-phosphate 100.0 1.1E-35 2.4E-40 255.1 18.5 242 4-271 106-352 (366)
83 PRK06959 putative threonine-ph 100.0 2.2E-34 4.7E-39 244.7 25.0 233 6-271 96-330 (339)
84 PRK05664 threonine-phosphate d 100.0 2.6E-34 5.7E-39 243.6 24.6 237 4-271 87-325 (330)
85 PRK02610 histidinol-phosphate 100.0 1E-34 2.3E-39 250.2 22.2 239 5-272 118-369 (374)
86 PRK04635 histidinol-phosphate 100.0 9.4E-35 2E-39 248.8 19.8 246 4-271 103-352 (354)
87 PRK05166 histidinol-phosphate 100.0 1.8E-34 3.9E-39 248.6 21.5 248 4-269 113-366 (371)
88 PRK09105 putative aminotransfe 100.0 2.6E-34 5.7E-39 247.0 22.2 242 4-271 120-367 (370)
89 PLN03026 histidinol-phosphate 100.0 3.7E-34 8E-39 247.1 22.2 243 4-271 128-379 (380)
90 PRK06225 aspartate aminotransf 100.0 1.1E-33 2.3E-38 244.7 24.8 254 4-272 108-374 (380)
91 PRK08153 histidinol-phosphate 100.0 9.3E-34 2E-38 243.8 22.5 245 4-271 109-362 (369)
92 PRK05387 histidinol-phosphate 100.0 1.1E-33 2.5E-38 242.3 22.5 246 4-272 102-351 (353)
93 PRK02731 histidinol-phosphate 100.0 8.4E-34 1.8E-38 244.4 21.6 247 4-272 109-364 (367)
94 PRK04870 histidinol-phosphate 100.0 4.8E-34 1E-38 244.8 19.9 242 4-272 106-356 (356)
95 PRK14808 histidinol-phosphate 100.0 2.8E-33 6E-38 237.7 23.6 236 4-271 97-334 (335)
96 KOG0634 Aromatic amino acid am 100.0 3.8E-33 8.3E-38 230.0 21.0 258 4-272 149-464 (472)
97 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1E-32 2.2E-37 234.1 21.8 239 6-269 89-330 (330)
98 PRK00950 histidinol-phosphate 100.0 1.1E-32 2.4E-37 236.9 20.7 242 4-272 112-360 (361)
99 PLN02368 alanine transaminase 100.0 5.7E-33 1.2E-37 240.2 18.0 205 4-217 156-396 (407)
100 TIGR01141 hisC histidinol-phos 100.0 1.7E-32 3.6E-37 234.5 19.8 243 4-269 96-346 (346)
101 PRK03317 histidinol-phosphate 100.0 2.5E-32 5.4E-37 235.2 20.8 242 4-272 113-362 (368)
102 PRK14807 histidinol-phosphate 100.0 8E-32 1.7E-36 230.5 22.3 242 4-271 101-349 (351)
103 PRK08354 putative aminotransfe 100.0 8.7E-32 1.9E-36 226.5 22.1 228 4-270 78-308 (311)
104 PRK03321 putative aminotransfe 100.0 7.8E-32 1.7E-36 230.8 19.2 245 4-272 99-349 (352)
105 PRK03967 histidinol-phosphate 100.0 1.3E-30 2.8E-35 221.7 19.4 230 4-270 95-330 (337)
106 cd00609 AAT_like Aspartate ami 100.0 2.1E-29 4.7E-34 215.3 26.2 258 4-270 84-350 (350)
107 KOG0633 Histidinol phosphate a 100.0 4.4E-28 9.6E-33 188.0 15.2 253 3-272 111-375 (375)
108 TIGR03576 pyridox_MJ0158 pyrid 99.9 8.3E-26 1.8E-30 191.9 23.5 229 15-271 111-344 (346)
109 COG3977 Alanine-alpha-ketoisov 99.9 2.1E-25 4.5E-30 176.5 20.5 216 43-271 177-408 (417)
110 PRK10874 cysteine sulfinate de 99.9 4.2E-25 9E-30 192.5 22.0 252 4-271 110-395 (401)
111 TIGR03392 FeS_syn_CsdA cystein 99.9 1.3E-24 2.9E-29 189.2 21.1 254 4-271 107-392 (398)
112 TIGR00858 bioF 8-amino-7-oxono 99.9 6E-25 1.3E-29 188.8 17.9 248 4-269 101-360 (360)
113 PRK13392 5-aminolevulinate syn 99.9 1E-24 2.2E-29 190.4 17.9 240 15-271 145-394 (410)
114 KOG0258 Alanine aminotransfera 99.9 1.4E-24 3E-29 177.2 17.1 258 4-270 162-465 (475)
115 PRK13238 tnaA tryptophanase/L- 99.9 1.8E-24 4E-29 189.7 19.1 250 4-271 118-430 (460)
116 PLN02822 serine palmitoyltrans 99.9 2.6E-24 5.6E-29 190.2 19.4 238 18-271 209-474 (481)
117 PF12897 Aminotran_MocR: Alani 99.9 5.2E-24 1.1E-28 174.9 18.8 257 4-271 123-412 (425)
118 COG1448 TyrB Aspartate/tyrosin 99.9 6.4E-24 1.4E-28 174.0 17.3 250 6-272 123-396 (396)
119 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.8E-23 6.1E-28 178.9 21.0 239 4-271 91-365 (370)
120 PRK09295 bifunctional cysteine 99.9 3.1E-23 6.7E-28 181.0 21.5 254 4-271 114-401 (406)
121 TIGR00707 argD acetylornithine 99.9 1.2E-23 2.5E-28 182.2 18.5 205 44-272 169-379 (379)
122 PLN02855 Bifunctional selenocy 99.9 1.6E-23 3.4E-28 183.7 19.6 255 4-271 123-415 (424)
123 PRK05958 8-amino-7-oxononanoat 99.9 4.3E-23 9.4E-28 178.9 20.2 250 4-272 124-385 (385)
124 cd06451 AGAT_like Alanine-glyo 99.9 1.4E-22 3E-27 174.0 23.1 256 4-272 75-355 (356)
125 PLN02483 serine palmitoyltrans 99.9 4E-23 8.7E-28 183.0 19.7 251 4-271 186-463 (489)
126 PRK02627 acetylornithine amino 99.9 6E-23 1.3E-27 178.7 20.5 204 44-272 181-392 (396)
127 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.8E-22 4E-27 173.1 22.9 242 15-272 89-355 (355)
128 TIGR03403 nifS_epsilon cystein 99.9 9.1E-23 2E-27 176.7 20.7 238 17-271 108-372 (382)
129 PRK02948 cysteine desulfurase; 99.9 3.7E-23 8.1E-28 179.0 18.2 240 15-271 104-371 (381)
130 PRK05093 argD bifunctional N-s 99.9 5.5E-23 1.2E-27 179.0 19.2 205 44-272 183-398 (403)
131 TIGR01979 sufS cysteine desulf 99.9 1E-22 2.2E-27 177.7 20.8 254 4-271 109-398 (403)
132 PRK10534 L-threonine aldolase; 99.9 5.5E-23 1.2E-27 174.9 18.0 237 4-272 74-331 (333)
133 cd00378 SHMT Serine-glycine hy 99.9 2.7E-22 5.8E-27 174.9 22.6 249 4-272 106-383 (402)
134 TIGR02326 transamin_PhnW 2-ami 99.9 6.1E-22 1.3E-26 170.4 23.8 241 16-272 94-360 (363)
135 cd06454 KBL_like KBL_like; thi 99.9 1.2E-22 2.6E-27 173.9 18.7 251 4-271 86-348 (349)
136 PRK09064 5-aminolevulinate syn 99.9 2.2E-22 4.8E-27 175.6 20.3 211 44-271 177-394 (407)
137 TIGR01821 5aminolev_synth 5-am 99.9 2.7E-22 5.8E-27 174.8 20.6 210 45-271 177-393 (402)
138 PRK06939 2-amino-3-ketobutyrat 99.9 1E-22 2.3E-27 177.2 17.8 251 4-272 127-391 (397)
139 PLN02721 threonine aldolase 99.9 5.4E-22 1.2E-26 170.1 21.7 246 4-272 81-350 (353)
140 PLN02409 serine--glyoxylate am 99.9 9.9E-22 2.1E-26 170.9 23.2 258 4-272 85-370 (401)
141 TIGR01822 2am3keto_CoA 2-amino 99.9 1.3E-22 2.8E-27 176.4 17.6 209 45-271 170-386 (393)
142 PRK03244 argD acetylornithine 99.9 2.3E-22 4.9E-27 175.1 17.8 206 44-272 182-392 (398)
143 PRK01278 argD acetylornithine 99.9 5.3E-22 1.2E-26 172.2 19.9 204 44-272 174-386 (389)
144 TIGR01976 am_tr_V_VC1184 cyste 99.9 8.9E-22 1.9E-26 171.4 20.8 249 4-268 105-397 (397)
145 COG0520 csdA Selenocysteine ly 99.9 2.8E-21 6E-26 166.4 22.7 244 15-271 128-402 (405)
146 TIGR01825 gly_Cac_T_rel pyrido 99.9 7.5E-22 1.6E-26 171.2 18.9 249 4-271 118-378 (385)
147 PRK13393 5-aminolevulinate syn 99.9 1.1E-21 2.3E-26 171.2 19.4 211 44-271 176-393 (406)
148 PRK04073 rocD ornithine--oxo-a 99.9 7.8E-22 1.7E-26 171.5 18.4 205 44-272 185-395 (396)
149 PRK13479 2-aminoethylphosphona 99.9 3.4E-21 7.4E-26 166.1 21.8 241 16-272 96-361 (368)
150 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 5E-21 1.1E-25 164.6 22.6 241 4-271 84-359 (361)
151 cd06453 SufS_like Cysteine des 99.9 2.2E-21 4.8E-26 167.6 20.1 252 4-268 89-373 (373)
152 PRK02936 argD acetylornithine 99.9 3.4E-21 7.4E-26 166.6 20.8 204 44-272 166-377 (377)
153 TIGR03402 FeS_nifS cysteine de 99.9 3.3E-21 7.3E-26 166.8 20.0 237 18-271 105-369 (379)
154 cd06502 TA_like Low-specificit 99.9 2.8E-21 6.1E-26 164.7 18.8 238 4-270 72-337 (338)
155 PRK07179 hypothetical protein; 99.9 1.8E-21 3.9E-26 169.9 17.8 209 45-271 181-395 (407)
156 PRK04260 acetylornithine amino 99.9 2.5E-20 5.4E-25 161.0 20.5 207 44-272 164-375 (375)
157 TIGR01977 am_tr_V_EF2568 cyste 99.9 4.9E-20 1.1E-24 159.3 22.3 242 18-270 106-375 (376)
158 PRK08088 4-aminobutyrate amino 99.9 3.3E-20 7.2E-25 162.5 19.5 210 44-272 198-421 (425)
159 PTZ00125 ornithine aminotransf 99.9 1.9E-20 4.1E-25 163.2 17.5 206 44-272 177-393 (400)
160 COG0075 Serine-pyruvate aminot 99.9 2.4E-19 5.2E-24 150.7 22.7 253 6-272 85-361 (383)
161 PRK13520 L-tyrosine decarboxyl 99.9 1.8E-19 3.9E-24 155.5 22.0 247 4-272 105-369 (371)
162 PRK12381 bifunctional succinyl 99.8 8.6E-20 1.9E-24 159.0 19.3 205 44-272 182-397 (406)
163 cd00617 Tnase_like Tryptophana 99.8 8.2E-20 1.8E-24 158.4 18.2 251 4-271 93-405 (431)
164 cd00610 OAT_like Acetyl ornith 99.8 1.5E-19 3.3E-24 158.2 19.8 205 45-272 191-413 (413)
165 PRK07505 hypothetical protein; 99.8 1.6E-19 3.6E-24 157.3 19.4 210 44-272 178-397 (402)
166 TIGR03812 tyr_de_CO2_Arch tyro 99.8 3.2E-19 7E-24 154.1 20.9 243 4-271 107-373 (373)
167 PLN02242 methionine gamma-lyas 99.8 4.2E-19 9.2E-24 154.3 21.4 176 4-206 116-304 (418)
168 PRK00854 rocD ornithine--oxo-a 99.8 2.6E-19 5.7E-24 156.0 19.0 205 44-272 186-399 (401)
169 PLN00144 acetylornithine trans 99.8 2.9E-19 6.3E-24 154.2 18.9 203 44-272 166-378 (382)
170 COG0156 BioF 7-keto-8-aminopel 99.8 3.8E-19 8.1E-24 150.8 19.0 209 46-272 172-388 (388)
171 PRK07049 methionine gamma-lyas 99.8 4.6E-19 1E-23 154.6 19.6 174 4-199 123-311 (427)
172 PRK09792 4-aminobutyrate trans 99.8 5.1E-19 1.1E-23 154.5 19.8 207 44-272 197-419 (421)
173 cd06450 DOPA_deC_like DOPA dec 99.8 5.5E-20 1.2E-24 157.2 13.2 219 15-271 108-345 (345)
174 cd00613 GDC-P Glycine cleavage 99.8 4.2E-19 9.1E-24 154.7 18.9 249 4-268 109-398 (398)
175 PRK00011 glyA serine hydroxyme 99.8 1.8E-18 3.9E-23 151.5 22.7 247 4-272 112-387 (416)
176 PRK00451 glycine dehydrogenase 99.8 5.3E-19 1.2E-23 156.2 19.4 251 4-272 155-446 (447)
177 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 1E-18 2.3E-23 151.4 20.8 227 18-271 118-378 (387)
178 COG1104 NifS Cysteine sulfinat 99.8 9E-19 2E-23 146.3 19.1 235 20-271 112-374 (386)
179 TIGR02006 IscS cysteine desulf 99.8 1E-18 2.2E-23 152.3 20.4 235 20-271 113-374 (402)
180 TIGR03235 DNA_S_dndA cysteine 99.8 1.3E-19 2.8E-24 155.4 14.5 232 17-263 106-347 (353)
181 TIGR03246 arg_catab_astC succi 99.8 5.1E-19 1.1E-23 153.7 18.2 205 44-272 178-393 (397)
182 TIGR00700 GABAtrnsam 4-aminobu 99.8 9.7E-19 2.1E-23 152.9 19.2 207 44-272 196-418 (420)
183 PRK06777 4-aminobutyrate amino 99.8 2.9E-18 6.2E-23 149.8 20.1 208 44-272 197-419 (421)
184 PLN02955 8-amino-7-oxononanoat 99.8 1.7E-18 3.7E-23 150.1 18.3 202 46-271 250-458 (476)
185 PLN02651 cysteine desulfurase 99.8 1.3E-18 2.9E-23 149.7 17.6 227 19-262 108-364 (364)
186 PRK06460 hypothetical protein; 99.8 5.7E-18 1.2E-22 145.8 21.3 170 4-199 85-261 (376)
187 PRK13580 serine hydroxymethylt 99.8 4.3E-18 9.2E-23 147.8 20.0 231 24-271 194-442 (493)
188 PLN02624 ornithine-delta-amino 99.8 1.5E-18 3.2E-23 153.5 17.6 206 44-272 223-442 (474)
189 PRK06918 4-aminobutyrate amino 99.8 1.8E-18 4E-23 152.4 17.9 205 47-272 220-441 (451)
190 PRK08247 cystathionine gamma-s 99.8 1.8E-18 3.9E-23 148.6 17.3 222 4-256 91-348 (366)
191 TIGR00713 hemL glutamate-1-sem 99.8 1.8E-18 3.9E-23 151.7 17.3 207 44-272 194-420 (423)
192 PRK08360 4-aminobutyrate amino 99.8 1.1E-17 2.5E-22 146.6 20.9 205 44-272 203-424 (443)
193 PLN03227 serine palmitoyltrans 99.8 6.9E-18 1.5E-22 146.1 18.8 212 44-272 137-380 (392)
194 PRK04612 argD acetylornithine 99.8 9.3E-18 2E-22 145.8 19.1 204 45-272 186-401 (408)
195 TIGR01885 Orn_aminotrans ornit 99.8 6.2E-18 1.4E-22 147.3 17.7 206 44-272 185-400 (401)
196 PF04864 Alliinase_C: Allinase 99.8 1.1E-18 2.4E-23 141.9 11.6 204 44-271 136-362 (363)
197 PRK14012 cysteine desulfurase; 99.8 2.6E-17 5.6E-22 143.6 20.1 249 4-271 95-376 (404)
198 PRK07582 cystathionine gamma-l 99.8 1.6E-16 3.4E-21 136.5 24.3 234 4-269 90-364 (366)
199 cd00614 CGS_like CGS_like: Cys 99.8 7.4E-17 1.6E-21 138.9 20.9 223 19-272 100-368 (369)
200 TIGR01814 kynureninase kynuren 99.8 7.8E-17 1.7E-21 140.7 21.1 233 18-272 133-405 (406)
201 PRK05937 8-amino-7-oxononanoat 99.8 7.9E-17 1.7E-21 138.9 19.6 201 45-271 143-347 (370)
202 PF00266 Aminotran_5: Aminotra 99.8 8.5E-17 1.9E-21 138.9 19.9 236 16-264 106-371 (371)
203 PRK08133 O-succinylhomoserine 99.8 2.4E-16 5.1E-21 136.5 21.3 170 4-199 101-277 (390)
204 KOG1359 Glycine C-acetyltransf 99.8 4.3E-17 9.3E-22 129.2 15.1 210 44-271 192-409 (417)
205 PRK07495 4-aminobutyrate amino 99.7 1.4E-16 3.1E-21 139.0 19.3 206 44-272 197-419 (425)
206 TIGR01437 selA_rel uncharacter 99.7 2.1E-16 4.7E-21 135.6 19.9 236 4-272 100-363 (363)
207 PRK04366 glycine dehydrogenase 99.7 1.8E-16 3.9E-21 140.7 20.0 253 5-271 163-445 (481)
208 PRK06234 methionine gamma-lyas 99.7 2.1E-16 4.5E-21 137.2 19.5 168 4-199 104-284 (400)
209 PRK08117 4-aminobutyrate amino 99.7 1.4E-16 3.1E-21 139.9 18.7 207 45-272 207-427 (433)
210 PRK06767 methionine gamma-lyas 99.7 1.7E-16 3.7E-21 137.3 18.8 173 44-240 145-332 (386)
211 TIGR02407 ectoine_ectB diamino 99.7 3.9E-16 8.4E-21 136.1 20.3 206 45-272 194-410 (412)
212 PRK08776 cystathionine gamma-s 99.7 1.1E-15 2.4E-20 132.7 22.9 171 4-199 100-277 (405)
213 KOG1412 Aspartate aminotransfe 99.7 3.5E-16 7.6E-21 124.9 17.1 226 6-238 128-378 (410)
214 KOG1360 5-aminolevulinate synt 99.7 2.3E-16 5.1E-21 129.9 16.4 213 44-271 302-521 (570)
215 PRK07504 O-succinylhomoserine 99.7 1.9E-15 4.2E-20 131.1 23.1 168 4-199 105-282 (398)
216 COG4992 ArgD Ornithine/acetylo 99.7 3.5E-16 7.5E-21 130.8 16.6 224 24-272 165-396 (404)
217 PRK08249 cystathionine gamma-s 99.7 1.4E-15 2.9E-20 131.9 20.3 170 4-199 104-280 (398)
218 PRK09264 diaminobutyrate--2-ox 99.7 7.3E-16 1.6E-20 135.0 18.4 208 45-272 198-414 (425)
219 TIGR01325 O_suc_HS_sulf O-succ 99.7 1.1E-15 2.4E-20 132.0 19.1 170 4-199 94-270 (380)
220 PRK06058 4-aminobutyrate amino 99.7 7.9E-16 1.7E-20 135.4 18.5 206 44-272 218-440 (443)
221 TIGR01364 serC_1 phosphoserine 99.7 9.4E-16 2E-20 130.7 17.7 242 6-271 85-345 (349)
222 PRK03080 phosphoserine aminotr 99.7 9.8E-16 2.1E-20 132.3 17.7 245 6-271 95-370 (378)
223 PRK07810 O-succinylhomoserine 99.7 2.3E-15 5E-20 130.7 20.0 160 15-199 126-287 (403)
224 PRK00062 glutamate-1-semialdeh 99.7 1.3E-15 2.8E-20 133.5 17.5 205 44-272 196-422 (426)
225 TIGR02080 O_succ_thio_ly O-suc 99.7 3.1E-15 6.7E-20 129.0 19.4 133 44-199 135-268 (382)
226 TIGR01328 met_gam_lyase methio 99.7 2.2E-15 4.7E-20 130.5 18.3 168 4-199 99-277 (391)
227 PRK08064 cystathionine beta-ly 99.7 8.4E-15 1.8E-19 126.8 21.9 237 4-270 93-382 (390)
228 PRK08045 cystathionine gamma-s 99.7 9.2E-15 2E-19 126.2 21.7 133 44-199 136-269 (386)
229 PRK07811 cystathionine gamma-s 99.7 5.7E-15 1.2E-19 127.8 20.1 171 4-199 101-278 (388)
230 TIGR00709 dat 2,4-diaminobutyr 99.7 3.4E-15 7.4E-20 131.3 18.9 207 44-272 205-433 (442)
231 PRK07503 methionine gamma-lyas 99.7 3.6E-15 7.7E-20 129.6 18.7 168 4-199 105-283 (403)
232 PRK05355 3-phosphoserine/phosp 99.7 2.5E-15 5.3E-20 128.7 16.8 243 6-272 96-356 (360)
233 cd00611 PSAT_like Phosphoserin 99.7 4.5E-15 9.7E-20 127.2 18.3 241 7-271 93-353 (355)
234 PRK05964 adenosylmethionine--8 99.7 5.3E-15 1.2E-19 129.6 19.1 205 44-272 198-420 (423)
235 PRK05968 hypothetical protein; 99.7 7.6E-15 1.6E-19 127.1 19.5 239 4-270 103-386 (389)
236 PTZ00094 serine hydroxymethylt 99.7 1.2E-14 2.5E-19 128.4 20.8 213 44-272 181-406 (452)
237 PRK08593 4-aminobutyrate amino 99.7 6.7E-15 1.5E-19 129.3 18.9 206 44-272 206-427 (445)
238 KOG1411 Aspartate aminotransfe 99.7 2.9E-16 6.2E-21 127.0 9.1 225 6-237 149-397 (427)
239 KOG2862 Alanine-glyoxylate ami 99.7 2.3E-14 5E-19 114.7 19.1 254 6-272 97-380 (385)
240 PRK06541 hypothetical protein; 99.7 1.3E-14 2.8E-19 127.9 19.7 206 45-272 220-453 (460)
241 TIGR01329 cysta_beta_ly_E cyst 99.7 1.5E-14 3.1E-19 124.8 18.9 227 4-256 86-359 (378)
242 PLN02724 Molybdenum cofactor s 99.7 1.1E-14 2.4E-19 136.5 19.3 219 44-271 191-485 (805)
243 cd00616 AHBA_syn 3-amino-5-hyd 99.6 2.2E-14 4.8E-19 122.9 19.1 236 4-269 59-352 (352)
244 TIGR01326 OAH_OAS_sulfhy OAH/O 99.6 1.1E-14 2.5E-19 127.1 17.1 115 4-134 97-220 (418)
245 PRK09028 cystathionine beta-ly 99.6 5.8E-14 1.3E-18 120.9 20.9 170 4-199 101-277 (394)
246 PRK07671 cystathionine beta-ly 99.6 3.9E-14 8.6E-19 122.1 19.8 169 4-199 89-266 (377)
247 PRK08861 cystathionine gamma-s 99.6 1.4E-13 3E-18 118.7 22.9 168 4-199 93-270 (388)
248 PRK07050 cystathionine beta-ly 99.6 5E-14 1.1E-18 122.0 20.2 169 4-199 105-282 (394)
249 PRK13034 serine hydroxymethylt 99.6 1.3E-13 2.9E-18 120.4 22.9 211 44-272 167-390 (416)
250 TIGR01366 serC_3 phosphoserine 99.6 3.7E-14 8.1E-19 121.6 18.6 241 9-271 90-357 (361)
251 COG0160 GabT 4-aminobutyrate a 99.6 2E-14 4.4E-19 123.5 16.8 207 44-272 221-443 (447)
252 PRK08574 cystathionine gamma-s 99.6 1.3E-13 2.7E-18 119.2 21.8 170 4-199 93-269 (385)
253 PRK03715 argD acetylornithine 99.6 4.3E-14 9.3E-19 122.6 18.9 204 44-272 178-391 (395)
254 TIGR02379 ECA_wecE TDP-4-keto- 99.6 7.4E-14 1.6E-18 120.3 19.6 243 4-272 72-375 (376)
255 PRK08248 O-acetylhomoserine am 99.6 8.1E-14 1.8E-18 121.8 18.9 178 4-199 104-313 (431)
256 TIGR03372 putres_am_tran putre 99.6 1.5E-13 3.2E-18 120.3 20.1 207 44-272 223-442 (442)
257 PRK05769 4-aminobutyrate amino 99.6 1.3E-13 2.7E-18 121.2 19.3 204 44-272 220-437 (441)
258 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 2E-13 4.4E-18 117.9 20.1 243 4-271 72-373 (375)
259 TIGR01324 cysta_beta_ly_B cyst 99.6 1.8E-13 3.9E-18 117.8 19.6 168 4-199 90-266 (377)
260 PRK05939 hypothetical protein; 99.6 9.7E-14 2.1E-18 120.2 17.9 178 4-199 87-284 (397)
261 PLN03226 serine hydroxymethylt 99.6 3.5E-13 7.6E-18 119.0 21.0 232 27-272 160-417 (475)
262 TIGR03531 selenium_SpcS O-phos 99.6 2.8E-13 6.1E-18 117.7 20.0 240 15-272 164-444 (444)
263 PRK07678 aminotransferase; Val 99.6 1.9E-13 4.2E-18 120.4 19.1 212 44-272 212-447 (451)
264 PRK11522 putrescine--2-oxoglut 99.6 2.1E-13 4.5E-18 120.1 19.0 206 45-272 231-449 (459)
265 PRK07269 cystathionine gamma-s 99.6 3.6E-13 7.9E-18 115.4 20.1 151 44-217 135-288 (364)
266 PRK06173 adenosylmethionine--8 99.6 2.1E-13 4.5E-18 119.2 18.5 205 44-272 205-423 (429)
267 cd00615 Orn_deC_like Ornithine 99.6 1.8E-14 3.9E-19 120.4 11.4 178 4-197 100-293 (294)
268 PRK06176 cystathionine gamma-s 99.6 2.5E-13 5.4E-18 117.2 18.6 171 4-199 89-266 (380)
269 PLN02509 cystathionine beta-ly 99.6 3E-13 6.6E-18 118.6 19.0 169 4-199 172-349 (464)
270 PRK05967 cystathionine beta-ly 99.6 1.1E-12 2.4E-17 112.9 20.9 205 4-234 104-335 (395)
271 KOG1368 Threonine aldolase [Am 99.5 2E-13 4.3E-18 108.8 14.2 228 20-269 116-363 (384)
272 PRK07986 adenosylmethionine--8 99.5 5.8E-13 1.3E-17 116.4 18.1 203 45-272 204-421 (428)
273 PLN02760 4-aminobutyrate:pyruv 99.5 7.7E-13 1.7E-17 117.7 18.8 204 45-272 260-489 (504)
274 KOG1357 Serine palmitoyltransf 99.5 1.3E-13 2.8E-18 115.5 12.7 208 48-270 278-498 (519)
275 COG2008 GLY1 Threonine aldolas 99.5 5.3E-13 1.2E-17 109.7 15.9 230 20-271 94-340 (342)
276 PRK13360 omega amino acid--pyr 99.5 1.2E-12 2.7E-17 114.9 19.3 204 45-272 215-438 (442)
277 PRK06084 O-acetylhomoserine am 99.5 9.1E-13 2E-17 115.1 18.2 78 44-132 142-219 (425)
278 PRK05965 hypothetical protein; 99.5 1.3E-12 2.8E-17 115.4 19.2 205 44-272 214-445 (459)
279 PRK05630 adenosylmethionine--8 99.5 1.1E-12 2.3E-17 114.6 18.4 204 44-272 199-418 (422)
280 PRK06082 4-aminobutyrate amino 99.5 9.4E-13 2E-17 116.1 18.1 205 44-272 228-449 (459)
281 PRK05639 4-aminobutyrate amino 99.5 1.4E-12 3.1E-17 114.9 18.8 207 44-272 221-441 (457)
282 PLN02271 serine hydroxymethylt 99.5 3.6E-12 7.9E-17 111.9 21.0 235 24-271 272-537 (586)
283 PRK00615 glutamate-1-semialdeh 99.5 1.1E-12 2.4E-17 114.7 17.7 205 44-272 200-426 (433)
284 PLN02414 glycine dehydrogenase 99.5 5E-12 1.1E-16 118.9 23.1 253 6-271 618-904 (993)
285 PRK09221 beta alanine--pyruvat 99.5 1.8E-12 3.9E-17 114.0 19.1 205 44-272 217-441 (445)
286 TIGR00508 bioA adenosylmethion 99.5 1.5E-12 3.3E-17 114.0 18.6 204 45-272 207-424 (427)
287 PRK11658 UDP-4-amino-4-deoxy-L 99.5 2.3E-12 5E-17 111.5 19.4 241 4-272 74-377 (379)
288 TIGR01788 Glu-decarb-GAD gluta 99.5 3.7E-12 8E-17 111.1 19.9 254 7-271 141-426 (431)
289 PRK06943 adenosylmethionine--8 99.5 2.1E-12 4.6E-17 113.7 18.6 204 44-272 220-444 (453)
290 TIGR01365 serC_2 phosphoserine 99.5 2.3E-12 5E-17 110.2 18.1 245 4-269 84-368 (374)
291 PF00464 SHMT: Serine hydroxym 99.5 4.5E-12 9.8E-17 108.2 19.6 231 24-267 143-398 (399)
292 PRK06105 aminotransferase; Pro 99.5 3E-12 6.4E-17 113.1 19.1 204 45-272 218-447 (460)
293 PRK06938 diaminobutyrate--2-ox 99.5 2.7E-12 5.8E-17 113.4 18.7 206 45-272 231-458 (464)
294 PRK07482 hypothetical protein; 99.5 4.5E-12 9.8E-17 112.0 20.2 207 44-272 219-452 (461)
295 PRK07480 putative aminotransfe 99.5 2.9E-12 6.3E-17 113.0 18.5 203 44-272 218-446 (456)
296 PRK07481 hypothetical protein; 99.5 4.1E-12 8.8E-17 112.0 19.5 205 44-272 212-443 (449)
297 PLN02482 glutamate-1-semialdeh 99.5 1.3E-12 2.7E-17 115.3 16.0 203 45-272 246-471 (474)
298 PLN02452 phosphoserine transam 99.5 3.2E-12 7E-17 109.2 18.0 241 7-271 101-360 (365)
299 PRK07036 hypothetical protein; 99.5 3.9E-12 8.4E-17 112.5 19.0 205 44-272 219-450 (466)
300 PRK06917 hypothetical protein; 99.5 4.8E-12 1E-16 111.4 19.4 211 45-272 199-435 (447)
301 PRK12389 glutamate-1-semialdeh 99.5 3.3E-12 7.1E-17 112.1 18.3 202 45-272 200-425 (428)
302 PRK08742 adenosylmethionine--8 99.5 7.2E-12 1.6E-16 110.7 19.5 204 44-272 235-465 (472)
303 PRK05994 O-acetylhomoserine am 99.5 9.7E-12 2.1E-16 108.9 20.2 115 4-131 103-223 (427)
304 PRK06702 O-acetylhomoserine am 99.5 1.7E-11 3.6E-16 106.8 21.2 176 4-199 101-310 (432)
305 PRK06062 hypothetical protein; 99.5 6.7E-12 1.5E-16 110.6 18.9 203 44-272 213-443 (451)
306 PRK07030 adenosylmethionine--8 99.5 7.3E-12 1.6E-16 110.7 18.8 204 44-272 213-444 (466)
307 TIGR03588 PseC UDP-4-keto-6-de 99.5 1.5E-11 3.2E-16 106.6 20.4 242 4-272 70-380 (380)
308 PRK06916 adenosylmethionine--8 99.5 6.3E-12 1.4E-16 111.0 18.3 203 44-272 222-453 (460)
309 PRK02769 histidine decarboxyla 99.5 1.3E-11 2.8E-16 106.3 19.4 234 15-271 123-369 (380)
310 PRK07483 hypothetical protein; 99.5 1.4E-11 3.1E-16 108.3 19.8 211 44-272 198-435 (443)
311 PRK06931 diaminobutyrate--2-ox 99.4 8.1E-12 1.7E-16 110.3 18.0 206 45-272 225-452 (459)
312 TIGR00699 GABAtrns_euk 4-amino 99.4 4.4E-12 9.4E-17 111.4 15.9 202 44-272 250-464 (464)
313 COG0001 HemL Glutamate-1-semia 99.4 1.9E-12 4E-17 109.7 12.8 227 24-271 178-425 (432)
314 PRK12403 putative aminotransfe 99.4 3.2E-11 7E-16 106.6 20.6 204 45-272 222-450 (460)
315 PRK08297 L-lysine aminotransfe 99.4 1.7E-11 3.6E-16 107.8 18.5 203 44-272 224-439 (443)
316 PRK06148 hypothetical protein; 99.4 1.6E-11 3.5E-16 117.6 19.4 205 45-272 784-1008(1013)
317 COG0626 MetC Cystathionine bet 99.4 2.7E-11 5.9E-16 103.1 18.4 180 15-218 119-319 (396)
318 KOG1402 Ornithine aminotransfe 99.4 7.8E-12 1.7E-16 101.1 14.0 206 44-272 206-425 (427)
319 PRK06149 hypothetical protein; 99.4 1.8E-11 3.9E-16 117.1 19.0 206 45-272 744-968 (972)
320 PRK08114 cystathionine beta-ly 99.4 5.8E-11 1.3E-15 102.3 19.9 190 18-233 121-332 (395)
321 TIGR03251 LAT_fam L-lysine 6-t 99.4 4.8E-11 1E-15 104.8 19.6 204 44-271 217-431 (431)
322 KOG1549 Cysteine desulfurase N 99.4 2.4E-11 5.1E-16 102.7 16.0 143 17-171 149-298 (428)
323 COG0112 GlyA Glycine/serine hy 99.4 1.1E-10 2.3E-15 97.1 19.4 229 24-272 140-388 (413)
324 PRK04013 argD acetylornithine/ 99.4 7.1E-11 1.5E-15 101.1 19.0 195 44-272 161-358 (364)
325 PRK12462 phosphoserine aminotr 99.4 7.5E-11 1.6E-15 100.0 18.6 242 6-271 98-359 (364)
326 PRK07812 O-acetylhomoserine am 99.4 1.2E-10 2.6E-15 101.9 20.4 162 18-199 128-317 (436)
327 PRK07046 aminotransferase; Val 99.4 7.1E-11 1.5E-15 104.1 19.1 201 44-272 217-448 (453)
328 TIGR00461 gcvP glycine dehydro 99.4 1.4E-10 3E-15 108.2 21.5 245 15-271 591-864 (939)
329 PF01053 Cys_Met_Meta_PP: Cys/ 99.4 3E-11 6.6E-16 103.8 15.7 190 17-234 113-325 (386)
330 PRK06434 cystathionine gamma-l 99.4 2E-10 4.4E-15 98.9 20.2 188 15-233 120-321 (384)
331 PRK08134 O-acetylhomoserine am 99.3 1.5E-10 3.2E-15 101.5 18.0 100 19-131 124-224 (433)
332 TIGR02618 tyr_phenol_ly tyrosi 99.3 1.4E-10 3E-15 100.1 17.2 212 45-271 170-423 (450)
333 PRK12566 glycine dehydrogenase 99.3 2.6E-10 5.7E-15 105.9 19.5 240 17-271 606-873 (954)
334 PLN02880 tyrosine decarboxylas 99.3 3.2E-10 7E-15 100.8 19.1 248 15-271 194-481 (490)
335 PLN02974 adenosylmethionine-8- 99.3 3.5E-10 7.5E-15 105.3 19.9 207 45-272 584-816 (817)
336 cd01494 AAT_I Aspartate aminot 99.3 3.7E-11 8.1E-16 91.7 10.8 120 4-132 42-170 (170)
337 PRK05367 glycine dehydrogenase 99.3 9E-10 1.9E-14 104.3 21.4 238 4-269 166-437 (954)
338 PLN03032 serine decarboxylase; 99.3 1.1E-09 2.4E-14 93.8 20.0 242 6-270 113-372 (374)
339 PLN02590 probable tyrosine dec 99.3 6.6E-10 1.4E-14 99.2 18.2 248 15-271 242-529 (539)
340 KOG1404 Alanine-glyoxylate ami 99.2 3.3E-10 7.2E-15 93.8 14.5 201 46-267 213-431 (442)
341 PRK13237 tyrosine phenol-lyase 99.2 3.4E-09 7.4E-14 91.8 21.3 213 45-271 177-430 (460)
342 COG0161 BioA Adenosylmethionin 99.2 8.6E-10 1.9E-14 94.8 17.1 210 45-272 213-441 (449)
343 PRK06209 glutamate-1-semialdeh 99.2 4.6E-10 9.9E-15 98.6 15.8 202 45-272 187-403 (431)
344 PRK05367 glycine dehydrogenase 99.2 3E-09 6.5E-14 100.8 21.3 242 16-271 604-872 (954)
345 KOG0053 Cystathionine beta-lya 99.2 1.4E-09 3E-14 91.9 17.0 157 17-199 135-294 (409)
346 PRK05613 O-acetylhomoserine am 99.2 5.4E-09 1.2E-13 91.6 21.2 163 17-199 127-322 (437)
347 PRK15029 arginine decarboxylas 99.2 3.9E-09 8.4E-14 97.2 20.5 141 48-199 315-464 (755)
348 PRK15407 lipopolysaccharide bi 99.2 8.7E-09 1.9E-13 90.6 21.2 118 4-136 112-238 (438)
349 PRK04311 selenocysteine syntha 99.2 6.2E-09 1.4E-13 91.7 20.2 235 17-272 186-462 (464)
350 COG2873 MET17 O-acetylhomoseri 99.2 2.3E-09 4.9E-14 88.6 16.0 172 15-199 118-311 (426)
351 TIGR03799 NOD_PanD_pyr putativ 99.2 4.8E-09 1E-13 93.7 18.8 236 24-267 235-518 (522)
352 COG1103 Archaea-specific pyrid 99.1 2.4E-09 5.2E-14 84.8 14.3 235 6-271 102-377 (382)
353 PLN02263 serine decarboxylase 99.1 2.5E-08 5.3E-13 87.2 21.7 244 6-271 180-440 (470)
354 PLN02414 glycine dehydrogenase 99.1 1.2E-08 2.5E-13 96.7 20.3 239 4-269 193-464 (993)
355 COG0399 WecE Predicted pyridox 99.1 4.2E-08 9.1E-13 83.3 21.7 244 4-272 75-371 (374)
356 PRK15400 lysine decarboxylase 99.0 1.9E-08 4.2E-13 91.8 18.0 237 17-271 250-556 (714)
357 COG0076 GadB Glutamate decarbo 99.0 1.1E-08 2.3E-13 89.9 14.8 222 7-236 160-400 (460)
358 PRK13578 ornithine decarboxyla 99.0 2.9E-08 6.4E-13 90.7 17.9 216 46-271 283-562 (720)
359 PF01276 OKR_DC_1: Orn/Lys/Arg 99.0 1.7E-09 3.7E-14 93.0 9.4 153 43-206 163-328 (417)
360 PF01041 DegT_DnrJ_EryC1: DegT 99.0 9.8E-09 2.1E-13 88.5 13.7 237 4-269 66-363 (363)
361 TIGR00474 selA seryl-tRNA(sec) 99.0 1.6E-07 3.5E-12 82.6 19.8 231 17-268 181-453 (454)
362 PF01212 Beta_elim_lyase: Beta 98.9 2E-10 4.3E-15 95.1 0.6 176 22-211 91-282 (290)
363 PF00202 Aminotran_3: Aminotra 98.9 4.9E-09 1.1E-13 89.3 8.2 140 44-199 176-316 (339)
364 KOG2467 Glycine/serine hydroxy 98.9 3.1E-07 6.7E-12 75.9 17.7 234 26-271 165-423 (477)
365 KOG1401 Acetylornithine aminot 98.9 5.5E-08 1.2E-12 81.4 13.3 142 45-199 206-352 (433)
366 PRK15399 lysine decarboxylase 98.9 4.7E-07 1E-11 82.9 20.5 206 46-271 298-556 (713)
367 TIGR00461 gcvP glycine dehydro 98.9 3.1E-07 6.7E-12 86.3 19.6 226 17-269 172-426 (939)
368 PF02347 GDC-P: Glycine cleava 98.9 3.7E-07 8E-12 78.8 18.3 227 18-268 174-429 (429)
369 KOG1358 Serine palmitoyltransf 98.9 6.5E-08 1.4E-12 80.4 13.0 210 47-271 234-462 (467)
370 KOG1383 Glutamate decarboxylas 98.8 8.1E-07 1.8E-11 75.7 18.1 221 15-242 183-415 (491)
371 COG3844 Kynureninase [Amino ac 98.8 9.4E-07 2E-11 72.1 16.8 209 44-272 165-400 (407)
372 PF00282 Pyridoxal_deC: Pyrido 98.7 3.3E-07 7.1E-12 79.0 11.9 203 6-216 143-372 (373)
373 TIGR02617 tnaA_trp_ase tryptop 98.7 1.8E-06 3.9E-11 74.5 15.6 203 55-271 194-438 (467)
374 COG1003 GcvP Glycine cleavage 98.6 1.3E-05 2.8E-10 68.1 18.8 254 5-271 159-444 (496)
375 PF06838 Met_gamma_lyase: Meth 98.5 2E-06 4.3E-11 71.6 10.8 185 16-218 121-319 (403)
376 KOG1403 Predicted alanine-glyo 98.3 3.7E-05 8.1E-10 62.3 13.8 200 53-271 217-434 (452)
377 KOG1405 4-aminobutyrate aminot 98.3 3.9E-05 8.5E-10 63.5 13.9 197 47-271 272-480 (484)
378 COG3033 TnaA Tryptophanase [Am 98.2 4.8E-05 1E-09 63.2 13.6 215 44-271 184-441 (471)
379 COG1982 LdcC Arginine/lysine/o 98.1 0.00019 4.1E-09 63.8 15.3 152 43-207 163-321 (557)
380 COG0403 GcvP Glycine cleavage 98.0 0.0028 6E-08 54.2 20.2 231 17-271 183-447 (450)
381 COG1932 SerC Phosphoserine ami 98.0 0.00018 3.9E-09 60.1 12.6 201 48-271 147-360 (365)
382 PRK12566 glycine dehydrogenase 98.0 0.00089 1.9E-08 63.4 17.8 204 44-269 207-439 (954)
383 PF05889 SLA_LP_auto_ag: Solub 97.9 0.0018 4E-08 55.2 16.4 242 19-272 118-388 (389)
384 COG1921 SelA Selenocysteine sy 97.8 0.00032 6.9E-09 59.7 11.1 139 15-171 124-267 (395)
385 KOG0628 Aromatic-L-amino-acid/ 97.7 0.00061 1.3E-08 58.5 11.2 248 16-271 196-468 (511)
386 PF03841 SelA: L-seryl-tRNA se 97.7 0.00017 3.8E-09 60.7 7.3 171 17-199 106-296 (367)
387 KOG0629 Glutamate decarboxylas 97.6 0.00083 1.8E-08 57.2 10.3 233 24-271 223-506 (510)
388 COG4100 Cystathionine beta-lya 97.6 0.0009 2E-08 54.5 9.9 112 17-136 133-253 (416)
389 KOG3846 L-kynurenine hydrolase 97.3 0.018 3.9E-07 47.4 14.1 210 44-271 213-458 (465)
390 TIGR03811 tyr_de_CO2_Ent tyros 97.2 0.054 1.2E-06 49.8 17.5 189 7-199 225-475 (608)
391 KOG2790 Phosphoserine aminotra 96.1 0.1 2.2E-06 42.6 10.4 234 15-271 112-365 (370)
392 KOG2040 Glycine dehydrogenase 95.4 0.58 1.3E-05 42.8 13.1 238 15-270 643-914 (1001)
393 KOG2040 Glycine dehydrogenase 92.5 5 0.00011 37.1 13.1 84 176-269 391-478 (1001)
394 KOG3843 Predicted serine hydro 90.1 0.22 4.8E-06 40.3 2.3 59 63-122 172-230 (432)
395 cd06568 GH20_SpHex_like A subg 88.9 1.2 2.6E-05 37.9 5.9 69 15-83 23-93 (329)
396 cd02742 GH20_hexosaminidase Be 88.0 0.95 2.1E-05 38.1 4.8 68 15-83 21-90 (303)
397 cd06563 GH20_chitobiase-like T 87.1 1.3 2.9E-05 38.2 5.2 69 15-83 23-104 (357)
398 cd06562 GH20_HexA_HexB-like Be 85.8 1.7 3.7E-05 37.3 5.2 65 15-83 23-88 (348)
399 cd06570 GH20_chitobiase-like_1 85.4 2.4 5.2E-05 35.8 5.8 62 15-82 23-85 (311)
400 PF00728 Glyco_hydro_20: Glyco 83.0 0.68 1.5E-05 39.7 1.6 68 15-83 23-91 (351)
401 cd06569 GH20_Sm-chitobiase-lik 82.2 3.8 8.2E-05 36.5 5.9 68 15-82 27-114 (445)
402 COG0296 GlgB 1,4-alpha-glucan 74.4 5.4 0.00012 37.0 4.6 40 53-95 205-244 (628)
403 PF10087 DUF2325: Uncharacteri 73.3 16 0.00035 24.7 5.8 63 15-85 15-82 (97)
404 TIGR02104 pulA_typeI pullulana 69.7 8 0.00017 36.0 4.7 37 51-90 218-254 (605)
405 PF04016 DUF364: Domain of unk 66.1 9.3 0.0002 28.3 3.6 68 4-77 12-88 (147)
406 KOG2741 Dimeric dihydrodiol de 63.0 9.8 0.00021 32.4 3.5 72 11-88 60-132 (351)
407 cd06564 GH20_DspB_LnbB-like Gl 60.7 19 0.00042 30.6 5.1 66 15-82 22-99 (326)
408 smart00642 Aamy Alpha-amylase 59.5 14 0.00029 28.1 3.6 27 63-89 68-94 (166)
409 PHA02678 hypothetical protein; 59.0 17 0.00037 23.8 3.3 54 23-89 26-83 (89)
410 TIGR02102 pullulan_Gpos pullul 57.8 28 0.0006 34.9 6.1 39 48-89 541-579 (1111)
411 PF03786 UxuA: D-mannonate deh 57.4 23 0.00049 30.5 4.8 46 40-85 20-65 (351)
412 COG3525 Chb N-acetyl-beta-hexo 56.5 24 0.00051 32.9 5.0 68 16-84 284-365 (732)
413 PLN03244 alpha-amylase; Provis 55.6 21 0.00046 34.1 4.7 40 54-93 430-469 (872)
414 PF13872 AAA_34: P-loop contai 54.4 10 0.00022 31.8 2.2 25 65-89 159-184 (303)
415 PF03460 NIR_SIR_ferr: Nitrite 51.8 13 0.00028 23.2 2.0 29 49-78 9-37 (69)
416 PF07745 Glyco_hydro_53: Glyco 50.7 41 0.00088 28.8 5.3 57 45-103 40-97 (332)
417 PF14258 DUF4350: Domain of un 49.5 55 0.0012 20.4 4.7 59 15-84 10-70 (70)
418 PF00128 Alpha-amylase: Alpha 48.5 19 0.00041 29.8 3.1 28 64-91 51-78 (316)
419 TIGR02402 trehalose_TreZ malto 47.7 36 0.00077 31.4 4.9 31 61-91 156-186 (542)
420 PRK09441 cytoplasmic alpha-amy 45.8 25 0.00054 31.7 3.6 28 63-90 79-106 (479)
421 PF08672 APC2: Anaphase promot 45.6 29 0.00063 21.3 2.8 35 54-88 25-59 (60)
422 PLN02877 alpha-amylase/limit d 45.2 68 0.0015 31.7 6.4 29 63-91 464-492 (970)
423 COG0065 LeuC 3-isopropylmalate 43.3 40 0.00087 29.3 4.1 40 47-86 58-97 (423)
424 TIGR02064 dsrA sulfite reducta 42.3 36 0.00079 29.9 3.9 37 43-79 75-111 (402)
425 PLN02960 alpha-amylase 41.3 46 0.001 32.4 4.6 38 56-93 457-494 (897)
426 TIGR00789 flhB_rel flhB C-term 39.7 31 0.00068 22.7 2.4 23 67-89 29-51 (82)
427 PRK12313 glycogen branching en 39.1 56 0.0012 30.8 4.9 32 60-91 215-246 (633)
428 COG2870 RfaE ADP-heptose synth 38.8 53 0.0012 28.8 4.2 42 43-89 141-182 (467)
429 PLN02447 1,4-alpha-glucan-bran 38.7 51 0.0011 31.6 4.5 32 60-91 295-326 (758)
430 cd04937 ACT_AKi-DapG-BS_2 ACT 38.1 66 0.0014 19.6 3.7 42 223-271 20-61 (64)
431 PLN00196 alpha-amylase; Provis 37.8 40 0.00087 30.0 3.5 27 63-89 90-116 (428)
432 cd04908 ACT_Bt0572_1 N-termina 37.4 97 0.0021 18.9 5.5 40 225-265 18-57 (66)
433 COG1377 FlhB Flagellar biosynt 37.0 34 0.00075 29.5 2.8 20 67-86 298-317 (363)
434 PRK13109 flhB flagellar biosyn 36.9 26 0.00056 30.3 2.1 20 67-86 300-319 (358)
435 TIGR01515 branching_enzym alph 36.9 61 0.0013 30.4 4.7 32 60-91 201-232 (613)
436 PF14085 DUF4265: Domain of un 35.8 1.6E+02 0.0034 20.8 5.8 44 187-231 65-108 (117)
437 COG1105 FruK Fructose-1-phosph 35.8 93 0.002 26.3 5.1 41 45-88 129-169 (310)
438 cd04915 ACT_AK-Ectoine_2 ACT d 35.7 94 0.002 19.2 4.1 44 223-271 20-63 (66)
439 cd04920 ACT_AKiii-DAPDC_2 ACT 35.3 75 0.0016 19.4 3.6 42 223-271 19-60 (63)
440 COG2257 Uncharacterized homolo 34.8 29 0.00063 23.2 1.6 22 67-88 34-55 (92)
441 PRK05402 glycogen branching en 34.6 72 0.0016 30.6 4.9 34 57-90 307-340 (726)
442 TIGR02103 pullul_strch alpha-1 34.4 61 0.0013 31.9 4.3 54 35-92 378-431 (898)
443 TIGR00097 HMP-P_kinase phospho 34.2 54 0.0012 26.6 3.6 37 45-88 67-104 (254)
444 PF13113 DUF3970: Protein of u 34.1 58 0.0012 19.9 2.7 20 251-270 3-22 (60)
445 TIGR03793 TOMM_pelo TOMM prope 34.0 69 0.0015 20.8 3.3 25 46-71 51-75 (77)
446 PF00117 GATase: Glutamine ami 33.8 61 0.0013 24.8 3.7 62 15-82 13-76 (192)
447 PRK10785 maltodextrin glucosid 33.3 50 0.0011 30.8 3.6 27 63-89 224-250 (598)
448 PLN02361 alpha-amylase 33.0 52 0.0011 29.0 3.4 27 63-89 74-100 (401)
449 COG0352 ThiE Thiamine monophos 32.5 58 0.0013 25.8 3.3 65 64-135 51-116 (211)
450 PF00150 Cellulase: Cellulase 32.3 53 0.0012 26.7 3.3 57 15-88 26-85 (281)
451 PRK09108 type III secretion sy 31.9 33 0.00072 29.6 2.0 20 67-86 293-312 (353)
452 PRK14706 glycogen branching en 31.7 84 0.0018 29.7 4.7 35 57-91 209-243 (639)
453 PRK14705 glycogen branching en 31.7 77 0.0017 32.3 4.6 37 55-91 805-841 (1224)
454 COG2923 DsrF Uncharacterized p 31.6 64 0.0014 22.8 3.0 42 49-90 4-48 (118)
455 COG0821 gcpE 1-hydroxy-2-methy 31.6 3.4E+02 0.0073 23.4 7.8 36 45-88 49-84 (361)
456 PF15366 DUF4597: Domain of un 31.0 26 0.00057 20.9 0.9 14 52-65 27-40 (62)
457 PRK12468 flhB flagellar biosyn 30.8 37 0.0008 29.7 2.1 21 67-87 298-318 (386)
458 PF10609 ParA: ParA/MinD ATPas 30.7 1.5E+02 0.0033 19.5 4.5 35 43-82 23-57 (81)
459 cd01137 PsaA Metal binding pro 30.6 2.4E+02 0.0051 23.5 6.9 15 224-238 186-200 (287)
460 PF05913 DUF871: Bacterial pro 30.5 35 0.00076 29.5 1.9 25 64-88 46-70 (357)
461 PF08543 Phos_pyr_kin: Phospho 30.5 67 0.0014 26.0 3.5 39 44-89 59-97 (246)
462 TIGR00695 uxuA mannonate dehyd 30.4 1.3E+02 0.0029 26.4 5.4 41 44-84 22-62 (394)
463 TIGR02050 gshA_cyan_rel unchar 30.3 2.1E+02 0.0047 23.8 6.5 90 176-270 55-144 (287)
464 cd01019 ZnuA Zinc binding prot 30.3 2.2E+02 0.0049 23.6 6.7 53 179-238 146-202 (286)
465 cd01585 AcnA_Bact Aconitase ca 30.1 1.8E+02 0.004 25.4 6.2 36 47-82 29-64 (380)
466 PRK08156 type III secretion sy 29.8 34 0.00074 29.6 1.7 21 67-87 286-306 (361)
467 KOG2836 Protein tyrosine phosp 29.5 1.3E+02 0.0028 22.0 4.2 33 44-84 15-47 (173)
468 COG1523 PulA Type II secretory 28.6 1.6E+02 0.0035 28.1 5.9 40 47-90 251-290 (697)
469 PRK03906 mannonate dehydratase 28.4 1.4E+02 0.0031 26.1 5.3 40 44-83 22-61 (385)
470 COG0351 ThiD Hydroxymethylpyri 27.8 81 0.0018 26.0 3.5 32 57-88 77-109 (263)
471 PRK09505 malS alpha-amylase; R 26.8 76 0.0017 30.2 3.6 29 63-91 290-318 (683)
472 TIGR02403 trehalose_treC alpha 26.5 78 0.0017 29.2 3.6 26 63-88 73-98 (543)
473 PF06462 Hyd_WA: Propeller; I 26.4 38 0.00083 17.7 0.9 10 53-62 19-28 (32)
474 PRK12568 glycogen branching en 26.2 1.1E+02 0.0024 29.3 4.5 32 61-92 315-346 (730)
475 PF11909 NdhN: NADH-quinone ox 26.1 1.9E+02 0.004 21.4 4.6 26 58-83 112-138 (154)
476 COG0108 RibB 3,4-dihydroxy-2-b 25.7 92 0.002 24.4 3.2 33 48-83 158-190 (203)
477 cd01169 HMPP_kinase 4-amino-5- 25.6 93 0.002 24.8 3.6 37 45-88 68-105 (242)
478 TIGR02100 glgX_debranch glycog 25.5 1.2E+02 0.0027 28.8 4.7 29 63-91 243-271 (688)
479 COG0673 MviM Predicted dehydro 25.3 1E+02 0.0022 26.0 4.0 70 15-89 59-129 (342)
480 cd04923 ACT_AK-LysC-DapG-like_ 25.3 1.3E+02 0.0027 17.7 3.4 43 223-272 19-61 (63)
481 PRK12412 pyridoxal kinase; Rev 25.2 91 0.002 25.6 3.5 37 45-88 72-109 (268)
482 TIGR02456 treS_nterm trehalose 24.9 1E+02 0.0023 28.3 4.1 28 63-90 74-101 (539)
483 KOG2656 DNA methyltransferase 24.8 86 0.0019 27.3 3.1 24 60-83 131-154 (445)
484 PRK10933 trehalose-6-phosphate 24.8 88 0.0019 28.9 3.6 27 63-89 79-105 (551)
485 COG5561 Predicted metal-bindin 24.3 1.7E+02 0.0036 19.7 3.7 43 200-242 56-99 (101)
486 PRK09545 znuA high-affinity zi 24.2 3.2E+02 0.007 23.1 6.6 15 224-238 212-226 (311)
487 PRK09627 oorA 2-oxoglutarate-a 24.2 3.5E+02 0.0076 23.7 6.9 75 183-269 248-327 (375)
488 cd06169 BMC Bacterial Micro-Co 24.0 1.8E+02 0.0039 17.7 4.9 50 221-272 13-62 (62)
489 PF01408 GFO_IDH_MocA: Oxidore 24.0 1E+02 0.0022 21.2 3.1 22 62-83 97-118 (120)
490 TIGR00334 5S_RNA_mat_M5 ribonu 23.7 1.2E+02 0.0027 23.2 3.6 31 59-89 30-60 (174)
491 cd06565 GH20_GcnA-like Glycosy 23.3 1.2E+02 0.0026 25.5 3.8 56 15-83 22-78 (301)
492 COG5319 Uncharacterized protei 23.1 2.9E+02 0.0064 19.9 5.5 60 177-243 76-138 (142)
493 TIGR00629 uvde UV damage endon 23.1 4.7E+02 0.01 22.2 7.9 37 178-214 40-79 (312)
494 TIGR00629 uvde UV damage endon 23.1 74 0.0016 27.0 2.5 28 59-89 196-223 (312)
495 TIGR03849 arch_ComA phosphosul 22.9 99 0.0021 25.0 3.1 33 57-89 33-65 (237)
496 COG1251 NirB NAD(P)H-nitrite r 22.9 1.2E+02 0.0026 29.1 3.9 33 49-82 552-584 (793)
497 KOG0470 1,4-alpha-glucan branc 22.7 1.4E+02 0.0031 28.4 4.4 40 65-105 311-350 (757)
498 cd02953 DsbDgamma DsbD gamma f 22.7 86 0.0019 21.1 2.5 41 225-265 61-103 (104)
499 KOG0256 1-aminocyclopropane-1- 22.6 3.5E+02 0.0076 24.1 6.4 60 17-79 164-225 (471)
500 COG3867 Arabinogalactan endo-1 22.4 2.5E+02 0.0055 23.8 5.3 51 44-94 78-133 (403)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-47 Score=326.96 Aligned_cols=261 Identities=36% Similarity=0.532 Sum_probs=233.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCC-CCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG-NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|++. |.......| ++++++++.+ .+|.+|++. .+++|+|++++||||||.+++++++++|+++|+
T Consensus 114 DeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~ 193 (393)
T COG0436 114 DEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAR 193 (393)
T ss_pred CEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHH
Confidence 56889999888 999999999 9999998765 499999654 368999999999999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhh
Q 036024 76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|++++|.||+|.++.+++. +.++.+.....+++|.++||||.++++|||+||++++ +++ ++.+.+....
T Consensus 194 ~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l--------~~~~~~~~~~ 265 (393)
T COG0436 194 EHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEEL--------IAALRKLKSY 265 (393)
T ss_pred HcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHH--------HHHHHHHHHh
Confidence 99999999999999999984 7777777655688999999999999999999999999 445 6677777888
Q ss_pred ccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-CCCceEEEeecCC-CChHHHHHHHH
Q 036024 154 CFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASL-GIKVYG-GINAPYVWAHFPG-RKSWDVFAEIL 229 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~i~l~~-~~~~~~~~~ll 229 (272)
...+++.+.|.|+.++|.... ....+++++.+++|++.+.+.|.++ |+.+.. |++++|+|++++. .++.+++.+|+
T Consensus 266 ~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll 345 (393)
T COG0436 266 LTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLL 345 (393)
T ss_pred cccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHH
Confidence 888899999999999999553 3677888899999999999999988 699988 7899999999986 68899999999
Q ss_pred HhcCeEeeCCCCCCCC-CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 230 EKTHITTVPGSGFGPG-GEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~-~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++||.+.||+.|+.. +.+++|+|++.+.++++++++++++++
T Consensus 346 ~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~ 389 (393)
T COG0436 346 EEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFL 389 (393)
T ss_pred HhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHH
Confidence 9999999999999985 899999999888899999999998753
No 2
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.6e-43 Score=308.51 Aligned_cols=268 Identities=46% Similarity=0.810 Sum_probs=219.8
Q ss_pred cccccccCccc-chHHhcccc-e-----------eEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-N-----------IEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~-----------~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..|.+. |...++..| + ++++|++.+++|.+|++. +++|+++++|||||||.+++.+++++|
T Consensus 123 d~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~-~~~k~i~l~nP~NPTG~~~s~~~~~~l 201 (409)
T PRK07590 123 NTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE-EKVDIIYLCFPNNPTGTVLTKEQLKAW 201 (409)
T ss_pred CEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc-cCceEEEEeCCCCCcCCcCCHHHHHHH
Confidence 67888888777 888888888 6 899999877789888765 789999999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC----CcchHH
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS----GFPVIN 145 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~----~~~~~~ 145 (272)
+++|++++++||+||+|.++.+++. +.++..+++..+++|+++||||++|+||+|+||++++++++... ......
T Consensus 202 ~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~ 281 (409)
T PRK07590 202 VDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNS 281 (409)
T ss_pred HHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHH
Confidence 9999999999999999999887653 34555555445679999999999999999999999998874210 000001
Q ss_pred HHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHH
Q 036024 146 DFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDV 224 (272)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~ 224 (272)
.+.........+.+.+.|.++..++......+++++++.++++++.+.+.|+++|+.+..+++|+|+|++++. .+..++
T Consensus 282 ~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~~~~~ 361 (409)
T PRK07590 282 LWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMSSWDF 361 (409)
T ss_pred HHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCcceEEEEECCCCCCHHHH
Confidence 1222222233357889999998888755568889999999999999999999999888888899999999984 355677
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 225 FAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
...+++++||.+.||+.|+..+.+++|+++..+++++++++++|.++|
T Consensus 362 ~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 362 FDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIKKAL 409 (409)
T ss_pred HHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHHHhhC
Confidence 888888889999999999876678999998778999999999999875
No 3
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-43 Score=308.11 Aligned_cols=258 Identities=25% Similarity=0.459 Sum_probs=221.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| +++++|++++++|.+|++.+ +++|+++++|||||||.+++.+++++|+++|++
T Consensus 118 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~ 197 (399)
T PRK07681 118 DIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKK 197 (399)
T ss_pred CEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHH
Confidence 67888777666 888889999 99999998877888875442 688999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
++++||+||+|.++.+++. ..++..+.+..+++|+++||||.||+||+|+||+++++++ ++.+........
T Consensus 198 ~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l--------~~~~~~~~~~~~ 269 (399)
T PRK07681 198 HNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEI--------VRALTQFKSNTD 269 (399)
T ss_pred cCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHH--------HHHHHHHHhhcc
Confidence 9999999999999887653 3455555545578999999999999999999999998887 667776666556
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi 234 (272)
.+.+.+.|.++.+++.+. ..++++.++.++++++.+.+.|++.|+++..+++|+|+|+.++ +.+..++..++++++||
T Consensus 270 ~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv 348 (399)
T PRK07681 270 YGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANV 348 (399)
T ss_pred cCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCE
Confidence 668889999999999843 4688889999999999999999999998877889999999998 44667888888887899
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
.+.||..|+..+++++|++++.+++++++++++|++
T Consensus 349 ~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 349 VVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred EEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 999999998666789999998888999999999987
No 4
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=2.4e-43 Score=305.64 Aligned_cols=260 Identities=23% Similarity=0.399 Sum_probs=213.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| +++++|++++++|.+|++. .+++|++++++||||||.+++.+++++|+++|++
T Consensus 117 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~ 196 (388)
T PRK07366 117 DFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQ 196 (388)
T ss_pred CEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHH
Confidence 66788877776 888888899 9999999877788877543 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC--CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGC--PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++++||+||+|.++.+++. ..++..+....+++++++||||+||+||+|+||+++++++ ++.+.......
T Consensus 197 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~l--------i~~l~~~~~~~ 268 (388)
T PRK07366 197 HDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQL--------IQALRQVKAVV 268 (388)
T ss_pred cCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHH--------HHHHHHHHhhc
Confidence 9999999999999987653 2345555433457899999999999999999999998887 66776666544
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC---ChHHHHHHHHHh
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR---KSWDVFAEILEK 231 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~ 231 (272)
..+.+...+.++.+.+.. ..+++++.++.++++++.+.+.|+++|+.+..|++|+|+|+.++.. +..+++..++++
T Consensus 269 ~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~ 347 (388)
T PRK07366 269 DFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQ 347 (388)
T ss_pred ccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCcccCCCHHHHHHHHHHh
Confidence 443433334444555542 3578899999999999999999999898877788999999999842 356777788888
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||+.|+..+.+++|++++.+++++++++++|+++|
T Consensus 348 ~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 348 TGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred CCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 89999999999766678999999888999999999999875
No 5
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=3.5e-42 Score=299.41 Aligned_cols=269 Identities=48% Similarity=0.872 Sum_probs=217.6
Q ss_pred cccccccCccc-chHHhcccc------------eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC------------NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g------------~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..|.+. |...++..| ++++++.+++++|.+|+...+++++++++|||||||.+++.+++++|
T Consensus 119 d~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l 198 (402)
T TIGR03542 119 NTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKEL 198 (402)
T ss_pred CEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHH
Confidence 66777777666 777776665 56778887666888887655789999999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
+++|++++++||+||+|.++.+++. +.++..++...+++++++||||.||+||+|+||++++++++..........+..
T Consensus 199 ~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~ 278 (402)
T TIGR03542 199 VDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWER 278 (402)
T ss_pred HHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHH
Confidence 9999999999999999999887653 344555554456889999999999999999999999988732111111233333
Q ss_pred hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHH
Q 036024 150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEI 228 (272)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~l 228 (272)
.......+++.+.|.++..++.+....+..+.++.++++++.+.+.|++.|+++.++.+++|+|+.++. .++.++...+
T Consensus 279 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~v~l~~~~~~~~l~~~l 358 (402)
T TIGR03542 279 RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAGFKVYGGEHAPYLWVKTPEGISSWDFFDFL 358 (402)
T ss_pred HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcCceecCCCceeEEEEECCCCCCHHHHHHHH
Confidence 333334457889999888888865666677788999999999999999989888887789999999984 4567888888
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++++||.+.||+.|+..+.+++|++++.+++++.+++++|+++|
T Consensus 359 ~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 359 LYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEAL 402 (402)
T ss_pred HHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhhC
Confidence 98889999999999766678999998778999999999999875
No 6
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.4e-42 Score=302.11 Aligned_cols=259 Identities=22% Similarity=0.346 Sum_probs=221.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| ++++++++++ ++.+|++. .+++|++++++||||||.+++.+++++|+++|++
T Consensus 140 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~ 218 (413)
T PLN00175 140 DEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKE 218 (413)
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 67888888777 778888889 9999999865 36666433 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+++++|+||+|.++.+++...++..+.+..+++|+++||||.||+||+|+||+++++++ ++.+.........
T Consensus 219 ~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l--------~~~l~~~~~~~~~ 290 (413)
T PLN00175 219 NDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL--------TWGVRQAHSFLTF 290 (413)
T ss_pred cCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHH--------HHHHHHHHhhccC
Confidence 99999999999998887655566666655688999999999999999999999999888 6677766666667
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--CC-ChHHHHHHHHHhcC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GR-KSWDVFAEILEKTH 233 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--~~-~~~~~~~~ll~~~g 233 (272)
+++.+.|.++.+++... ..++++.++.++++++.+.+.|++.|+.+..+++++|+|++++ +. ++.+++..+++++|
T Consensus 291 ~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~g 369 (413)
T PLN00175 291 ATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVG 369 (413)
T ss_pred CCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCC
Confidence 78999999999999743 5788999999999999999999999999998889999999984 33 45788888888889
Q ss_pred eEeeCCCCCCC---CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 234 ITTVPGSGFGP---GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 234 i~v~~g~~~~~---~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|.+.||+.|+. .+.+++|++++.+++++++++++|++++
T Consensus 370 V~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~ 411 (413)
T PLN00175 370 VAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKL 411 (413)
T ss_pred EEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 99999999963 2467999999888999999999998864
No 7
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-42 Score=300.36 Aligned_cols=260 Identities=25% Similarity=0.396 Sum_probs=217.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------------CCCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------------TSRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------------~~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..|++. |...+...| +++++|++.++++.+|++. .++++++++++||||||.++|.+++++
T Consensus 120 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~ 199 (403)
T PRK08636 120 DVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYER 199 (403)
T ss_pred CEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHH
Confidence 67888887777 778888889 9999999755567776442 257899999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~ 148 (272)
|+++|++|+++||+||+|.++.+++. ..++..++...+++++++||||.||+||+|+||+++++++ ++.+.
T Consensus 200 l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~l--------i~~~~ 271 (403)
T PRK08636 200 LVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKL--------VGALK 271 (403)
T ss_pred HHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHH--------HHHHH
Confidence 99999999999999999999887653 3455566544567888999999999999999999998887 66676
Q ss_pred hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC----ChHHH
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR----KSWDV 224 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~----~~~~~ 224 (272)
+.......+.+.+.|.++..++. ....+++++++.++++++.+.+.|++.|+.+..+++|+|+|++++.. ++.++
T Consensus 272 ~~~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~l 350 (403)
T PRK08636 272 KIKSWLDYGMFTPIQVAATIALD-GDQSCVEEIRETYRKRRDVLIESFANAGWELQKPRASMFVWAKIPEPARHLGSLEF 350 (403)
T ss_pred HHHHHhcccCChHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCcceEEEEECCCccCCCCHHHH
Confidence 66654445567778887776664 34578899999999999999999999898888888999999999842 35677
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 225 FAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
...+++++||.+.||..|+..+.+++|++++.+++++++++++|++++
T Consensus 351 ~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l 398 (403)
T PRK08636 351 SKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFL 398 (403)
T ss_pred HHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 778888889999999999876678999999888899999999998764
No 8
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-42 Score=299.00 Aligned_cols=259 Identities=25% Similarity=0.349 Sum_probs=220.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| +++++|..+++++.+|++. .++++++++++||||||.++|.+++++|+++|++
T Consensus 114 d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~ 193 (384)
T PRK06348 114 DEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIE 193 (384)
T ss_pred CEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 66778777766 888888889 9999998766677777554 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
++++||+||+|.++.+++...++..+.+..+++++++||||.+|+||+|+||+++++++ ++.+.........
T Consensus 194 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~--------~~~~~~~~~~~~~ 265 (384)
T PRK06348 194 YDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYI--------IETAKIINEGICF 265 (384)
T ss_pred CCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHH--------HHHHHHHHHhccC
Confidence 99999999999999887644555555544678999999999999999999999999877 6677766665556
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHhcC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTH 233 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~g 233 (272)
+.+.+.|.++..++. ...++.++.++.++++++.+.+.|+.+ ++.+..+++|+|+|+.++ +.++.++...+++++|
T Consensus 266 ~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~g 344 (384)
T PRK06348 266 SAPTISQRAAIYALK-HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAH 344 (384)
T ss_pred CCCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCC
Confidence 688999999998887 345778889999999999999999987 788888889999999997 3567788888888889
Q ss_pred eEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 234 ITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 234 i~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
|.+.||+.|+..+.+++|++++.+++++++++++|++.
T Consensus 345 v~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 345 VLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 99999999987667899999988899999999999864
No 9
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.9e-42 Score=299.97 Aligned_cols=259 Identities=28% Similarity=0.440 Sum_probs=216.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| +++++|++.+.++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 119 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~ 198 (389)
T PRK08068 119 DTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKK 198 (389)
T ss_pred CEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHH
Confidence 66777777776 888888999 9999999877688877443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+++ .+.+.....+..+++++++||||+||+||+|+||+++++++ ++.+........
T Consensus 199 ~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l--------~~~l~~~~~~~~ 270 (389)
T PRK08068 199 HNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESV--------IEAINLLQDHLF 270 (389)
T ss_pred cCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHH--------HHHHHHHHhhcc
Confidence 999999999999887765 23344444334568899999999999999999999998887 666666665555
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi 234 (272)
.+.+.+.|.++.+++.+ ...++++.++.++++++.+.+.|+++|+.+..+++++|+|+.+++ .+..++...+++++||
T Consensus 271 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi 349 (389)
T PRK08068 271 VSLFGAIQDAAIEALLS-DQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHV 349 (389)
T ss_pred CCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCE
Confidence 55566678878777763 347889999999999999999999999988888888999999974 4667788888877899
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
.+.||..|+..+.+++|++++.+++.+.+++++|+++
T Consensus 350 ~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 350 AVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred EEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 9999999986667899999988888999999999864
No 10
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=4.2e-42 Score=297.41 Aligned_cols=258 Identities=30% Similarity=0.459 Sum_probs=218.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| +++++|++.++++.+|++. .+++++++++|||||||.+++.+++++|+++|++
T Consensus 116 d~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~ 195 (383)
T TIGR03540 116 DIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKE 195 (383)
T ss_pred CEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHH
Confidence 66777777666 777888899 9999999877788777443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+++. ..++..+....+++++++||||.+|++|+|+||+++++++ ++.+........
T Consensus 196 ~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l--------~~~~~~~~~~~~ 267 (383)
T TIGR03540 196 YNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADL--------IAGLGKVKTNVD 267 (383)
T ss_pred cCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHH--------HHHHHHHHHhcc
Confidence 9999999999998887652 4455555444467899999999999999999999998877 566666655555
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi 234 (272)
.+++.+.|.++.+++.+ ..+++++.++.++++++.+.+.|++.|+.+..+++++|+|+.++ +.+..+++..+++++||
T Consensus 268 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi 346 (383)
T TIGR03540 268 SGVFQAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGV 346 (383)
T ss_pred cCCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCE
Confidence 56778889999999874 36788999999999999999999999999988888999999998 44667888888888899
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
.+.||+.|+..+.+++|++++.+++++.+++++|++
T Consensus 347 ~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 347 VVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred EEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 999999997656789999998889999999999975
No 11
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=8.6e-42 Score=295.69 Aligned_cols=258 Identities=31% Similarity=0.499 Sum_probs=217.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| +++.+|++.+.+|.+|++. .+++++++++|||||||.+++.+++++|+++|++
T Consensus 118 d~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~ 197 (385)
T PRK09276 118 DVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKK 197 (385)
T ss_pred CEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 67888877776 777888889 9999999877688777443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+++. ..++..+....+++++++||||.+|++|+|+||+++++++ ++.+.+......
T Consensus 198 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l--------~~~~~~~~~~~~ 269 (385)
T PRK09276 198 YDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADL--------IAGLGKVKSNVD 269 (385)
T ss_pred CCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHH--------HHHHHHHHhhcc
Confidence 9999999999999887643 3455555444567899999999999999999999998887 566666555445
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi 234 (272)
.+.+.+.|.++..++.. ...++++.++.++++++.+.+.|++.|+++..+++++|+|+.+++ .+..++..++++++||
T Consensus 270 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi 348 (385)
T PRK09276 270 SGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGV 348 (385)
T ss_pred CCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCE
Confidence 55677888888888863 457889999999999999999999999988888888999999974 4667788888887899
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
.+.||..|+..+++++|++++.+++++.+++++|.+
T Consensus 349 ~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 349 VVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred EECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 999999998666789999998888999999999975
No 12
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=3.6e-42 Score=297.38 Aligned_cols=260 Identities=28% Similarity=0.369 Sum_probs=219.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| ++++++++.++++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 106 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~ 185 (378)
T PRK07682 106 DEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEK 185 (378)
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHH
Confidence 66777777665 778888888 9999998765566666443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+++++|+||+|.++.+++...++..+.+..+++++++||||.||+||+|+||+++++++ ++.+.+.......
T Consensus 186 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~--------i~~l~~~~~~~~~ 257 (378)
T PRK07682 186 HDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYF--------SEAMLKIHQYSMM 257 (378)
T ss_pred cCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHH--------HHHHHHHHHhhcc
Confidence 99999999999999887654455555544578999999999999999999999999887 6666655555555
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--CCChHHHHHHHHHhcCe
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTHI 234 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~gi 234 (272)
+++.+.|.++.+++++ ...++++.++.++++++.+.+.|+++|+++..|++++|+|+.++ +.+..++...+++++||
T Consensus 258 ~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv 336 (378)
T PRK07682 258 CAPTMAQFAALEALRA-GNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKV 336 (378)
T ss_pred CCCHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCE
Confidence 6788999999999974 34567889999999999999999999999888889999999885 44677888888877799
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.||..|+..+++++|+|++.+++++++++++|++++
T Consensus 337 ~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l 374 (378)
T PRK07682 337 AVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFV 374 (378)
T ss_pred EEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 99999999866689999999888999999999998864
No 13
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-42 Score=297.25 Aligned_cols=260 Identities=20% Similarity=0.270 Sum_probs=215.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecC---CCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG---PGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~---~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|.+. |...++..| ++++++++ .+.++.+|++.+ +++++++++|||||||.+++.+++++|+++
T Consensus 127 d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~ 206 (405)
T PRK06207 127 DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAAL 206 (405)
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHH
Confidence 67788877776 778888889 99999986 233566664432 568999999999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
|++++++||+||+|.++.+++. ..++..+....+++++++||||++|+||+|+||+++++++ ++.+.....
T Consensus 207 a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l--------~~~~~~~~~ 278 (405)
T PRK06207 207 ARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAI--------IDRMEKLQA 278 (405)
T ss_pred HHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHH--------HHHHHHHHh
Confidence 9999999999999999988654 3344444444689999999999999999999999998877 667766666
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CChHHHHHHHH
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RKSWDVFAEIL 229 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll 229 (272)
......+.+.|.++.+++.+ ...++++..+.++++++.+.+.|+.+ ++++..|++|+|+|++++. .+..++...++
T Consensus 279 ~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~ 357 (405)
T PRK06207 279 IVSLRAAGYSQAVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKILR 357 (405)
T ss_pred HhccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHHHHHHH
Confidence 55556777899999999874 33456777888899999999999887 8888888899999999984 35677888887
Q ss_pred HhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 230 EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++||.+.||+.|+..+.+++|++++.+++++++++++|++++
T Consensus 358 ~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l 400 (405)
T PRK06207 358 LQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLI 400 (405)
T ss_pred HhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 7789999999999866678999999888899999999998764
No 14
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-42 Score=278.30 Aligned_cols=262 Identities=21% Similarity=0.322 Sum_probs=228.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|.+. |.......| ++++.|+. +++.+..|++.+ +++|++++||||||||.+|+.++|.+|+++|
T Consensus 108 d~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc 187 (388)
T COG1168 108 DGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELC 187 (388)
T ss_pred CeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHH
Confidence 67788777766 888999999 99999999 455577785553 5679999999999999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCC-CCCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024 75 RNNGSIIIFDSAYAAYVTDG-CPRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~-~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
.+||++||.||.|+++++.+ .+.+...+.. -.++.+.+.|.||+|.++|+++++++.+++..+ ...+.+...
T Consensus 188 ~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr------~~~~~~l~~ 261 (388)
T COG1168 188 LRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELR------AKFLKRLKR 261 (388)
T ss_pred HHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHH------HHHHHHHHH
Confidence 99999999999999999998 4555555532 247889999999999999999999999887742 233444445
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecC--CCChHHHHHHH
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFP--GRKSWDVFAEI 228 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~--~~~~~~~~~~l 228 (272)
....++|.++..|..++++ .+..|++++.+.++.|++++.+.|++. ++++..|++++.+|+++. +.++.+....+
T Consensus 262 ~~~~~~n~lg~~A~~aAY~-~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~l 340 (388)
T COG1168 262 NGLHGPSALGIIATEAAYN-QGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSELAEFL 340 (388)
T ss_pred hcCCCCchHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHHHHHHH
Confidence 6677799999999999998 777999999999999999999999987 999999999999999998 56667888999
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++.+|.+.+|+.||..|++++|+++..+++-+++++++|+.+|
T Consensus 341 l~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al 384 (388)
T COG1168 341 LEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRAL 384 (388)
T ss_pred HHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998764
No 15
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.7e-41 Score=295.19 Aligned_cols=260 Identities=26% Similarity=0.437 Sum_probs=218.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...+...| +++++|++.++++..++++ .++++++++++||||||.+++.+++++|+++|++
T Consensus 117 d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~ 196 (405)
T PRK09148 117 DVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKK 196 (405)
T ss_pred CEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 67888877776 777788889 9999999877666555443 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
++++||+||+|.++.+++. ..++..+.+..+++++++||||.+|+||+|+||+++++++ ++.+........
T Consensus 197 ~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~--------i~~l~~~~~~~~ 268 (405)
T PRK09148 197 HDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERL--------IAALTRVKSYLD 268 (405)
T ss_pred cCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHH--------HHHHHHHHHHhc
Confidence 9999999999999887653 3345555444567899999999999999999999998887 677777666555
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC----ChHHHHHHHHHh
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR----KSWDVFAEILEK 231 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~----~~~~~~~~ll~~ 231 (272)
.+++.+.|.++..++.+ ...++++.++.++++++.+.+.|..+|+.+..|++|+|+|+.++.. ...++...++++
T Consensus 269 ~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~ 347 (405)
T PRK09148 269 YGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEK 347 (405)
T ss_pred cCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHh
Confidence 56788999999999974 3578899999999999999999999998877788999999999742 346777888877
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||..|+..+.+++|+++..+.+++.+++++|.+++
T Consensus 348 ~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l 388 (405)
T PRK09148 348 ADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFL 388 (405)
T ss_pred CCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 79999999999765678999999878899999999998764
No 16
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.6e-41 Score=294.84 Aligned_cols=257 Identities=23% Similarity=0.333 Sum_probs=211.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...+...| +++++|++++++|.+|++.+ +++|+++++|||||||.+++.+++++|+++|++
T Consensus 118 d~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~ 197 (396)
T PRK09147 118 PLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDR 197 (396)
T ss_pred CEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHH
Confidence 56888888777 778888889 99999998777888885543 578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCc--c----ccC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSI--Y----EIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~--~----~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
|+++||+||+|.++.+++...+. . ... ...+++++++||||.+|+||+|+||+++++++ ++.+..
T Consensus 198 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l--------~~~~~~ 269 (396)
T PRK09147 198 YGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAAL--------LKKFLL 269 (396)
T ss_pred cCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHH--------HHHHHH
Confidence 99999999999998876531211 1 111 12478999999999999999999999999877 566665
Q ss_pred hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024 150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL 229 (272)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll 229 (272)
.......+.+.+.|.++.+.+.. .+++++.++.++++++.+.+.|... +.+..|++|+|+|++++ .++.+++..++
T Consensus 270 ~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~~g~f~~~~~~-~~~~~~~~~ll 345 (396)
T PRK09147 270 YRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV-LDVQLPDAGFYLWAKVP-GDDTEFARRLY 345 (396)
T ss_pred HhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCeeEEEEEECC-CCHHHHHHHHH
Confidence 55544556788888887777742 4678889999999999999999885 66667789999999998 45677888888
Q ss_pred HhcCeEeeCCCCCCC------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 230 EKTHITTVPGSGFGP------GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~------~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++||.+.||..|+. .+.+++|++++.+++++.+++++|++++
T Consensus 346 ~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 346 ADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFC 394 (396)
T ss_pred HhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 888999999998863 2367999999888999999999998864
No 17
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-41 Score=291.41 Aligned_cols=259 Identities=28% Similarity=0.429 Sum_probs=217.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...+...| +++++|++.+++|.+|++. .+++|+++++|||||||.+++.+++++|+++|++
T Consensus 122 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~ 201 (394)
T PRK05942 122 DVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARK 201 (394)
T ss_pred CEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 66777777776 666777888 9999999877677777443 2689999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+++. ..++..+.+..+++++++||||.||+||+|+||+++++++ ++.+........
T Consensus 202 ~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l--------~~~l~~~~~~~~ 273 (394)
T PRK05942 202 YEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHI--------IQGLRTLKTNLD 273 (394)
T ss_pred cCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHH--------HHHHHHHHhhcc
Confidence 9999999999999887653 3455555444566799999999999999999999998877 667766665555
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi 234 (272)
.+.+.+.|.++..++. ...++.++.++.++++++.+.+.|++.|+.+..+++++|+|+.++. .++.++..++++++||
T Consensus 274 ~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV 352 (394)
T PRK05942 274 YGIFSALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMGSTDFALNVLQKTGV 352 (394)
T ss_pred cCCCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeeEEEEECCCCCCHHHHHHHHHHHCCE
Confidence 5678888998988886 3356788999999999999999999889988888888999999984 4567777888888899
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
.+.||+.|+..+.+++|+++..+.+.+.+++++|.++
T Consensus 353 ~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 353 VVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred EEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 9999999976667899999987888899999998764
No 18
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.6e-41 Score=296.85 Aligned_cols=260 Identities=20% Similarity=0.285 Sum_probs=211.6
Q ss_pred cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..|++. |...+. ..| +++++|++.+++|.+|++.+ .++|+++++|||||||.+++.+++++
T Consensus 136 d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ 215 (468)
T PLN02450 136 DAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNL 215 (468)
T ss_pred CEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHH
Confidence 67888888777 666666 578 99999998777888874431 37899999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCC-CCCccccC--------CCCCceEEEecCccccCCCccceeEEEecccccccCC
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIP--------GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~--------~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~ 140 (272)
|+++|++++++||+||+|.++.+++. ..++.... ...+++++++||||.+|+||+|+||++++++.+
T Consensus 216 ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l---- 291 (468)
T PLN02450 216 LVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMV---- 291 (468)
T ss_pred HHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHH----
Confidence 99999999999999999998877653 33333221 135789999999999999999999999987652
Q ss_pred cchHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC
Q 036024 141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG 218 (272)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~ 218 (272)
...+.... .....+.+.|.++..++.+..+ .++++.++.++++++.+.+.|+++|+.+..+++|+|+|++++.
T Consensus 292 ---~~~~~~~~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~ 366 (468)
T PLN02450 292 ---VSAATKMS--SFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRH 366 (468)
T ss_pred ---HHHHHHHh--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchH
Confidence 33333332 2233688999999999986554 4688899999999999999999999998888899999999972
Q ss_pred -C------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 219 -R------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 219 -~------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
. ...+++..+++++||.+.||+.|+..+++++|++++. +++++++++++|++++
T Consensus 367 ~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l 428 (468)
T PLN02450 367 LLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFV 428 (468)
T ss_pred hcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 1 1245777888888999999999987678999999985 8899999999998763
No 19
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-41 Score=288.46 Aligned_cols=252 Identities=21% Similarity=0.272 Sum_probs=204.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|.|++..|++. |...+...| ++++++++.+++|.+|+.. .+++|+++++|||||||.+++.+++++|+++|+++|+
T Consensus 110 d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~ 189 (374)
T PRK05839 110 PTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDF 189 (374)
T ss_pred CEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhhccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCC
Confidence 55777767666 888889999 9999999877789888543 3679999999999999999999999999999999999
Q ss_pred EEEEcccCCccccCCCCCCcccc-----CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEI-----PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++|+||+|.++.+++...++... ....+++++++||||.||+||+|+||+++++++ ++.+.......
T Consensus 190 ~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~--------~~~~~~~~~~~ 261 (374)
T PRK05839 190 ILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASI--------LKKYKAYRTYL 261 (374)
T ss_pred EEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHH--------HHHHHHHHhhc
Confidence 99999999987654433333321 123378999999999999999999999998777 56666655544
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI 234 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi 234 (272)
....+.+.|.++..++.+ ..++++.+++++++++.+.+.| ++. .|++|+|+|++++ +..++..++++++||
T Consensus 262 ~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l---~~~--~p~gg~fi~~~~~--~~~~~~~~l~~~~gi 332 (374)
T PRK05839 262 GCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL---GIT--IPPATFYVWLPVD--NDEEFTKKLYQNEGI 332 (374)
T ss_pred CCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc---CCC--CCCeeEEEEEeCC--ChHHHHHHHHHHCCE
Confidence 455788888888877753 4577888999999999888765 433 5678999999997 456788888887899
Q ss_pred EeeCCCCCCCC--CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFGPG--GEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~~~--~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.||+.|+.. +++++|+|+..+++++.+++++|++++
T Consensus 333 ~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l 372 (374)
T PRK05839 333 KVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYL 372 (374)
T ss_pred EEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 99999988743 368999999778999999999998864
No 20
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=9.6e-41 Score=288.99 Aligned_cols=259 Identities=24% Similarity=0.371 Sum_probs=217.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| ++++++.+.+ ++.+|.+. .++++++++++||||||.+++.+++++|+++|++
T Consensus 114 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~ 192 (387)
T PRK07683 114 TEVILPAPIYPGYEPIIRLCGAKPVFIDTRST-GFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKD 192 (387)
T ss_pred CEEEEcCCCccchHHHHHHcCCEEEEeecCcc-cCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 66777777766 888888899 9999999754 77766332 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+++++|+||+|.++.+++...++....+.++++++++||||.+|+||+|+||+++++++ ++.+.........
T Consensus 193 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l--------~~~~~~~~~~~~~ 264 (387)
T PRK07683 193 KNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYL--------AKHILKVHQYNVT 264 (387)
T ss_pred cCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHH--------HHHHHHHHHhccC
Confidence 99999999999998877655566665445678999999999999999999999999887 5666655444444
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC--CChHHHHHHHHHhcCe
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHI 234 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi 234 (272)
+++.+.|.++.+++.+ ...+.++.++.++++++.+.+.|.+.|+.+..+++++|+|+.++. .++.++..++++++||
T Consensus 265 ~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI 343 (387)
T PRK07683 265 CASSISQYAALEALTA-GKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGL 343 (387)
T ss_pred CCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCE
Confidence 5677889989888874 345778889999999999999999999888888899999999873 4566777788888899
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.||+.|+..+++++|++++.+++++.+++++|.+++
T Consensus 344 ~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l 381 (387)
T PRK07683 344 AVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFL 381 (387)
T ss_pred EEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 99999999876679999999888999999999998753
No 21
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-41 Score=291.63 Aligned_cols=255 Identities=27% Similarity=0.401 Sum_probs=214.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| +++++|++++++|.+|++.+ +++|++++++||||||.+++.+++++|+++|++
T Consensus 131 d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~ 210 (410)
T PRK06290 131 DVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKE 210 (410)
T ss_pred CEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 66777777776 778888899 99999999877887775532 578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
++++||+||+|.++.+++.+.++..+....+++|+++||||.+|+||+|+||+++++++ ++.+.........
T Consensus 211 ~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l--------~~~l~~~~~~~~~ 282 (410)
T PRK06290 211 NNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELI--------VKAFATVKDNNDS 282 (410)
T ss_pred cCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHH--------HHHHHHHHhcccc
Confidence 99999999999998876544565555444567899999999999999999999998887 6677766666666
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC--------ChHHHHHHH
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR--------KSWDVFAEI 228 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~--------~~~~~~~~l 228 (272)
+.+.++|.++..++.+. ++.++.+++++++++.+.+.|++.|+.+..+++++++|+.++.. +..+++..|
T Consensus 283 ~~~~~~q~aa~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~L 360 (410)
T PRK06290 283 GQFIAIQKAGIYALDHP--EITEKIREKYSRRLDKLVKILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYL 360 (410)
T ss_pred CCcHHHHHHHHHHhhCc--HHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHH
Confidence 66778999999999753 56788999999999999999999999988888899999999742 567888999
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHhC
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEALF 272 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~l 272 (272)
+++.++.+.||+.|+ +++|++++ .++++.++++++|++.|
T Consensus 361 l~~~~v~~~p~~~~~----~~lRi~~~~~~~~~~~~~~~~~~l~~~~ 403 (410)
T PRK06290 361 IKEKLISTVPWDDAG----HFLRFSVTFEAKDEEEEDRILEEIKRRL 403 (410)
T ss_pred HHhCCEEEECCcccc----CeEEEEEEcccccccchhHHHHHHHHHH
Confidence 999888888988663 69999986 36778888888887764
No 22
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=9.6e-41 Score=288.71 Aligned_cols=257 Identities=23% Similarity=0.329 Sum_probs=212.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| +++.+|++++ ++.+|++. .+++|+++++|||||||.+++.+++++|+++|++
T Consensus 115 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~ 193 (384)
T PRK12414 115 DEVIYFEPSFDSYAPIVRLQGATPVAIKLSPE-DFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRN 193 (384)
T ss_pred CEEEEeCCCccchHHHHHHcCCEEEEEecCcc-ccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 66777777765 777778888 9999998754 56666433 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+++. ..++..+....+++++++||||.+|+||+|+||+++++++ ++.+........
T Consensus 194 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l--------~~~l~~~~~~~~ 265 (384)
T PRK12414 194 TDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAEL--------MDEIRKVHQFMV 265 (384)
T ss_pred CCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHH--------HHHHHHHHhhee
Confidence 9999999999999887653 3345444444568999999999999999999999999887 667777666566
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---CChHHHHHHHHHhc
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---RKSWDVFAEILEKT 232 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~ 232 (272)
.+++.+.|.++.+++.+... ..+.++.++++++.+.+.|++.|+.+.++++++|+|+.++. ..+.+++.++++++
T Consensus 266 ~~~s~~~q~a~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (384)
T PRK12414 266 FSADTPMQHAFAEALAEPAS--YLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDA 343 (384)
T ss_pred cCCCcHHHHHHHHHhcCChH--HHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEEEEcccccCCCCHHHHHHHHHHhC
Confidence 67889999999999975432 24578899999999999999999998888899999998863 34667787888888
Q ss_pred CeEeeCCCCCCCCC--CCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 233 HITTVPGSGFGPGG--EEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 233 gi~v~~g~~~~~~~--~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
||.+.||+.|+..+ .+++|++++.+++++++++++|.+.
T Consensus 344 gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~~ 384 (384)
T PRK12414 344 RVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCSL 384 (384)
T ss_pred CEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence 99999999996432 5799999988899999999999763
No 23
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-42 Score=282.45 Aligned_cols=259 Identities=27% Similarity=0.413 Sum_probs=225.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecC------CCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG------PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~------~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|+|..||++ |.......| ..+.+++. .-..|.+|.+. .+++|+|++|+||||||.++++++|++|
T Consensus 118 DeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~i 197 (420)
T KOG0257|consen 118 DEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERI 197 (420)
T ss_pred CEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHH
Confidence 78999999999 889999999 99999998 44568888443 4899999999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
+++|++||+++|.||+|.++.+++. ..+...++++.++++-++|+||++|+.|||+||+++++.+ ......
T Consensus 198 a~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L--------~~~~~~ 269 (420)
T KOG0257|consen 198 AELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHL--------YSALFP 269 (420)
T ss_pred HHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHh--------hhhHHH
Confidence 9999999999999999999999986 6788888999999999999999999999999999996666 666666
Q ss_pred hhhhccCCcchHHHHHHHHhccccc-------HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC----
Q 036024 150 IICTCFNGASNIAQAGGLACLSSEG-------LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---- 218 (272)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---- 218 (272)
.........+++.|.|.++++.... ..+.+++.+.|+++++.+.+.|.++|+++..|++++|+|++++.
T Consensus 270 vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~ 349 (420)
T KOG0257|consen 270 VHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSW 349 (420)
T ss_pred HhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEeccccccC
Confidence 6677777789999998888887333 14566699999999999999999999999999999999999971
Q ss_pred ---------CChHHHHHHHHHhcCeEeeCCCCCCCCC-----CCeEEEEccCCHHHHHHHHHHHHH
Q 036024 219 ---------RKSWDVFAEILEKTHITTVPGSGFGPGG-----EEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 219 ---------~~~~~~~~~ll~~~gi~v~~g~~~~~~~-----~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
.++-.+...++++.|+.+.|++.|+... .+.+|++++.+++-++.+.++|++
T Consensus 350 ~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 350 PFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLKK 415 (420)
T ss_pred CcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 1344577889999999999999998542 567889988899999999999873
No 24
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=288.71 Aligned_cols=258 Identities=22% Similarity=0.353 Sum_probs=216.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...+...| +++.+|++.++++.+|++.+ ++++++++++||||||.+++.+++++|+++|++
T Consensus 117 d~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~ 196 (387)
T PRK08960 117 KHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRA 196 (387)
T ss_pred CEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence 67777777666 777888888 99999998777777775542 568899999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+++++|+||+|.++.+++...++.. ..+++++++||||.+|++|+|+||+++++++ ++.+.........
T Consensus 197 ~~~~li~De~Y~~~~~~~~~~~~~~---~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~--------~~~~~~~~~~~~~ 265 (387)
T PRK08960 197 RGGHLVVDEIYHGLTYGVDAASVLE---VDDDAFVLNSFSKYFGMTGWRLGWLVAPPAA--------VPELEKLAQNLYI 265 (387)
T ss_pred cCCEEEEEccccccccCCCCCChhh---ccCCEEEEeecccccCCcccEEEEEEcCHHH--------HHHHHHHHhhhcc
Confidence 9999999999999887654444433 3468899999999999999999999999887 6667666665566
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecCC--CChHHHHHHHHHhcC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFPG--RKSWDVFAEILEKTH 233 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~g 233 (272)
+.+.+.|.++.+++.+....++++.++.++++++.+.+.|+.+|+.+ ..|++|+|+|++++. .++.+++.++++++|
T Consensus 266 ~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~g 345 (387)
T PRK08960 266 SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEH 345 (387)
T ss_pred CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCC
Confidence 68889999999988754457889999999999999999999988765 457789999999974 466777888888889
Q ss_pred eEeeCCCCCCCC-CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 234 ITTVPGSGFGPG-GEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 234 i~v~~g~~~~~~-~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|.+.||+.|+.. ..+++|++++.+.+++.+++++|++++
T Consensus 346 i~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 346 VAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGL 385 (387)
T ss_pred EEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999999753 357999999888889999999998864
No 25
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=5.1e-41 Score=290.73 Aligned_cols=258 Identities=20% Similarity=0.273 Sum_probs=218.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. +...++..| ++++++++.+ ++.+|++. .++++++++++||||||.+++++++++|+++|++
T Consensus 116 d~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~ 194 (386)
T PRK09082 116 DEVIVFDPSYDSYAPAIELAGGRAVRVALQPP-DFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAG 194 (386)
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 56777777776 777788888 9999999755 57777443 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+++. ..++..+.+..+++++++||||.+|++|+|+||+++++++ ++.+........
T Consensus 195 ~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l--------~~~~~~~~~~~~ 266 (386)
T PRK09082 195 TDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAAL--------SAEFRKVHQYNT 266 (386)
T ss_pred CCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHH--------HHHHHHHHhhhc
Confidence 9999999999999888653 4555566555678999999999999999999999999877 677777766556
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC---CCChHHHHHHHHHhc
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP---GRKSWDVFAEILEKT 232 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~---~~~~~~~~~~ll~~~ 232 (272)
.+++.++|.++.+++.. ..++.++.++.++++++.+.+.|++.|+++.++++++|+|+.++ +.+..+++..+++++
T Consensus 267 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 345 (386)
T PRK09082 267 FTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREH 345 (386)
T ss_pred CCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhC
Confidence 66899999988888863 45778889999999999999999999999988889999999987 345778888888899
Q ss_pred CeEeeCCCCCC--CCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 233 HITTVPGSGFG--PGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 233 gi~v~~g~~~~--~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
||.+.||+.|+ +.+.+++|++++.+++++++++++|+++
T Consensus 346 ~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~~ 386 (386)
T PRK09082 346 GVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQL 386 (386)
T ss_pred CEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence 99999999885 3356899999988899999999999863
No 26
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.2e-40 Score=294.61 Aligned_cols=260 Identities=18% Similarity=0.277 Sum_probs=209.9
Q ss_pred cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCC-----------CCCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKG-----------TSRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~-----------~~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..|++. |...++ ..| +++++|++.++++.+|++. ..++|+++++|||||||.+++.+++++
T Consensus 144 D~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~ 223 (496)
T PLN02376 144 DVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTN 223 (496)
T ss_pred CEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHH
Confidence 67888888777 666566 578 9999999866667666443 247899999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCC-CCCccccCC-------CCCceEEEecCccccCCCccceeEEEecccccccCCc
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-------AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF 141 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-------~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~ 141 (272)
|+++|+++++++|+||+|.++.+++. ..++..+.. ..+++++++||||.||+||+|+||++++++.+
T Consensus 224 L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l----- 298 (496)
T PLN02376 224 LVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSV----- 298 (496)
T ss_pred HHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHH-----
Confidence 99999999999999999999887653 445544421 12467889999999999999999999976652
Q ss_pred chHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC
Q 036024 142 PVINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR 219 (272)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~ 219 (272)
...+... .. ....+.+.|.++.+++.+..+ +++.+.++.++++++.+.+.|++.|+.+..+++|+|+|++++..
T Consensus 299 --~~~~~~~-~~-~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~ 374 (496)
T PLN02376 299 --VSCARKM-SS-FGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHL 374 (496)
T ss_pred --HHHHHHH-hh-cCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhh
Confidence 3333222 22 234788999999999986554 67788899999999999999999999998888999999999731
Q ss_pred --------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 220 --------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 220 --------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
...+++..+++++||.+.||+.|+...++++|++++. +++++++++++|++++
T Consensus 375 ~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 375 LRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFV 436 (496)
T ss_pred hccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 1256777788888999999999987678999999975 7889999999998763
No 27
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.4e-40 Score=287.28 Aligned_cols=255 Identities=23% Similarity=0.365 Sum_probs=208.6
Q ss_pred cccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|++..|++. |...+...| +++++|++++++|.+|++. .+++|+++++|||||||.+++.+++++|+++|++++
T Consensus 119 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~ 198 (393)
T TIGR03538 119 VVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYG 198 (393)
T ss_pred EEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCC
Confidence 666666665 788888889 9999999877788888543 257899999999999999999999999999999999
Q ss_pred CEEEEcccCCccccCCC--CCCcc-c---cC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024 79 SIIIFDSAYAAYVTDGC--PRSIY-E---IP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII 151 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~--~~~~~-~---~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
++||+||+|.++.+++. ..+.. . .. ...+++++++||||.++++|+|+||+++++++ ++.+....
T Consensus 199 ~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l--------~~~~~~~~ 270 (393)
T TIGR03538 199 FIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEI--------LKAFLRYR 270 (393)
T ss_pred EEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHH--------HHHHHHHH
Confidence 99999999998887642 22221 1 11 13468999999999999999999999999877 56666665
Q ss_pred hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHh
Q 036024 152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEK 231 (272)
Q Consensus 152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~ 231 (272)
.....+.+.+.|.++.+.+.. .+++++.++.++++++.+.+.|++. +.+..+++|+|+|++++ .++.++...++++
T Consensus 271 ~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~gg~f~~~~~~-~~~~~~~~~l~~~ 346 (393)
T TIGR03538 271 TYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV-LDLELPDAGFYLWPKVP-GDDEAFARALYEE 346 (393)
T ss_pred HhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh-CcccCCCeeEEEEEECC-CCHHHHHHHHHHH
Confidence 544555788889888777753 4678889999999999999999875 55667789999999998 4566778788888
Q ss_pred cCeEeeCCCCCCC------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGP------GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~------~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||+.|+. .+.+++|++++.+++++++++++|++++
T Consensus 347 ~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~ 393 (393)
T TIGR03538 347 ENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSFI 393 (393)
T ss_pred CCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHhC
Confidence 8999999999862 2367999999888999999999998864
No 28
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3.7e-40 Score=283.77 Aligned_cols=255 Identities=23% Similarity=0.305 Sum_probs=215.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| +++.+|++.+++|.+|++. .+++|++++++||||||.+++.+++++|+++|++
T Consensus 105 d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~ 184 (373)
T PRK07324 105 DHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARS 184 (373)
T ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 56777776665 777788899 9999999987788887544 2688999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+|+++|+||+|.++.+++...++.. ..+++|+++||||.+|++|+|+||+++++++ ++.+.+.+.....
T Consensus 185 ~~~~ii~De~y~~l~~~~~~~s~~~---~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~l--------i~~~~~~~~~~~~ 253 (373)
T PRK07324 185 VDAYVLSDEVYRPLDEDGSTPSIAD---LYEKGISTNSMSKTYSLPGIRVGWIAANEEV--------IDILRKYRDYTMI 253 (373)
T ss_pred CCCEEEEEccccccccCCCCCChhh---ccCCEEEEecchhhcCCccceeEEEecCHHH--------HHHHHHHhCcEEe
Confidence 9999999999999887654334433 2457899999999999999999999998777 6777777766556
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI 234 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi 234 (272)
+.+.+.|.++..++. ....+++++++.++++++.+.+.|++. ++.+..|++|+++|+.++ ..+..+++.++++++||
T Consensus 254 ~~~~~~q~~a~~~l~-~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv 332 (373)
T PRK07324 254 CAGVFDDMLASLALE-HRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGV 332 (373)
T ss_pred cCChHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCE
Confidence 678888988888876 344678889999999999999999887 788888888899899887 45677888999888899
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.||+.|+. ++++|+|++.+++.+.+++++|++++
T Consensus 333 ~v~pg~~F~~--~~~iRis~~~~~~~l~~~l~rl~~~l 368 (373)
T PRK07324 333 LLVPGNRFDL--EGHVRIGYCCDTETLKKGLKKLSEFL 368 (373)
T ss_pred EEECccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999999975 57999999888999999999998764
No 29
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.8e-40 Score=289.12 Aligned_cols=260 Identities=19% Similarity=0.307 Sum_probs=211.1
Q ss_pred cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..|++. |...+. +.| ++++++++.+++|.+|++.. .++|+++++|||||||.+++++++++
T Consensus 145 D~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~ 224 (447)
T PLN02607 145 DALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLED 224 (447)
T ss_pred CEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHH
Confidence 67888888877 666665 567 99999998777777774442 47899999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCC-CCCccccC------CCCCceEEEecCccccCCCccceeEEEecccccccCCcc
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIP------GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP 142 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~------~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~ 142 (272)
|+++|+++++.+|+||+|.++.+++. ..++.++. +..++++++.|+||.||++|+|+||+++.++.+
T Consensus 225 l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l------ 298 (447)
T PLN02607 225 ILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKV------ 298 (447)
T ss_pred HHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHH------
Confidence 99999999999999999998877643 34544331 125789999999999999999999999855442
Q ss_pred hHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-
Q 036024 143 VINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR- 219 (272)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~- 219 (272)
...+.... .....+.+.|.++..++.+..+ +++++.+++++++++.+.+.|++.|+.+..+++|+|+|++++..
T Consensus 299 -~~~~~~~~--~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~ 375 (447)
T PLN02607 299 -VTTARRMS--SFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLL 375 (447)
T ss_pred -HHHHHHHh--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhh
Confidence 33333222 2224688899999999987554 67888999999999999999999999988888999999999731
Q ss_pred -----C-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 220 -----K-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 220 -----~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
+ ..+++.++++++||.+.||+.|+...++++|++++. +++.+++++++|.+++
T Consensus 376 ~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l 435 (447)
T PLN02607 376 ETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFM 435 (447)
T ss_pred cCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 1 235667888888999999999987778999999985 8899999999998764
No 30
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=4.6e-40 Score=285.11 Aligned_cols=258 Identities=31% Similarity=0.479 Sum_probs=214.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++++|++.++++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 115 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~ 194 (388)
T PRK07337 115 DEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRA 194 (388)
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence 66777777666 777777788 9999999876677777544 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+++++|+||+|.++.+.+...+...+ .+++++++|+||.+|+||+|+||+++++++ ++.+.........
T Consensus 195 ~~~~ii~De~y~~~~~~~~~~~~~~~---~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l--------~~~l~~~~~~~~~ 263 (388)
T PRK07337 195 RGGFTIVDEIYQGLSYDAAPVSALSL---GDDVITINSFSKYFNMTGWRLGWLVVPEAL--------VGTFEKLAQNLFI 263 (388)
T ss_pred CCCEEEEeccccccccCCCCcChhhc---cCCEEEEEechhhcCCchhheeeeecCHHH--------HHHHHHHHHHhcc
Confidence 99999999999988776543333332 467899999999999999999999999877 6677766655555
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecCC------CChHHHHHHHH
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFPG------RKSWDVFAEIL 229 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~~------~~~~~~~~~ll 229 (272)
+.+.+.|.++..++.+....+.++.++.++++++.+.+.|+++|+.+ ..|++|+|+|++++. .++.++..+++
T Consensus 264 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll 343 (388)
T PRK07337 264 CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAML 343 (388)
T ss_pred CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHH
Confidence 68889999999988755556678889999999999999999988765 467789999999974 35667788888
Q ss_pred HhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 230 EKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++||.+.||+.|+. .+.+++|++++.+++++.+++++|.+++
T Consensus 344 ~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 344 HDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred HhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 888999999999974 3468999999888899999999999864
No 31
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=4.8e-40 Score=284.98 Aligned_cols=257 Identities=24% Similarity=0.375 Sum_probs=211.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|.+. |...++..| ++++++.+++ ++.+|++.+ ++++++++++||||||.+++.+++++|+++
T Consensus 116 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~ 194 (391)
T PRK07309 116 DKVLLPAPAYPGYEPIVNLVGAEIVEIDTTEN-DFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADV 194 (391)
T ss_pred CEEEEeCCCCcchHHHHHHcCCEEEEEecCCc-CCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHH
Confidence 66777777666 888888899 9999998654 566663321 368999999999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
|++|++++|+||+|.++.+++. ..++... ..+++++++||||.||+||+|+||+++++++ ++.+.....
T Consensus 195 ~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~--------~~~~~~~~~ 264 (391)
T PRK07309 195 LKKYDIFVISDEVYSELTYTGEPHVSIAEY--LPDQTILINGLSKSHAMTGWRIGLIFAPAEF--------TAQLIKSHQ 264 (391)
T ss_pred HHHcCcEEEEEccccceeeCCCCCCCHHHh--ccCCEEEEecChhhccCccceeEEEEeCHHH--------HHHHHHHHh
Confidence 9999999999999999988543 3344444 3478999999999999999999999999888 566665554
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC---ChHHHHHHHH
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR---KSWDVFAEIL 229 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~---~~~~~~~~ll 229 (272)
....+++.+.|.++..++.+.. .+....+++++++++.+.+.|++.|+.+..+++|+|+|+.++.. ++.++..+++
T Consensus 265 ~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~ 343 (391)
T PRK07309 265 YLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFA 343 (391)
T ss_pred hcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEECCCCCCCCHHHHHHHHH
Confidence 4445678899999999987533 33466788999999999999999999998888899999998742 4567777888
Q ss_pred HhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 230 EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++||.+.||+.|+..+.+++|+++..+.+++++++++|++++
T Consensus 344 ~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~ 386 (391)
T PRK07309 344 RKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYM 386 (391)
T ss_pred HhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 8889999999999877789999999888889999999998763
No 32
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=285.96 Aligned_cols=259 Identities=18% Similarity=0.224 Sum_probs=213.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| ++++++++.+ ++.+|++. .+++|++++++||||||.+++.+++++|+++|++
T Consensus 112 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~ 190 (387)
T PRK08912 112 DEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPP-HWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQR 190 (387)
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 66788777766 888889999 9999998754 45566443 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+++. ..++..+.+..+++++++|+||.+|++|+|+||+++++++ ++.+........
T Consensus 191 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~--------~~~l~~~~~~~~ 262 (387)
T PRK08912 191 HDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPL--------LRVLAKAHQFLT 262 (387)
T ss_pred CCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHH--------HHHHHHHHhhcc
Confidence 9999999999998887653 3455555444578999999999999999999999999887 556655555444
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC----CChHHHHHHHHHh
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG----RKSWDVFAEILEK 231 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~----~~~~~~~~~ll~~ 231 (272)
.+.+...|.++...+. ...+++++.++.++++++.+.+.|+..|+.+.++++++|+|+.++. .+..+++..++++
T Consensus 263 ~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~ 341 (387)
T PRK08912 263 FTTPPNLQAAVAYGLG-KPDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEE 341 (387)
T ss_pred ccCChHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEecccccCCCCCHHHHHHHHHhc
Confidence 4566677888877776 3356778899999999999999999999998888889999999974 3566788888888
Q ss_pred cCeEeeCCCCCCC--CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGP--GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~--~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||..|+. .+.+++|++++.+++++++++++|++++
T Consensus 342 ~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 342 AGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAAR 384 (387)
T ss_pred CCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 8999999999863 3468999999888899999999998864
No 33
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=4.9e-40 Score=281.11 Aligned_cols=254 Identities=24% Similarity=0.335 Sum_probs=211.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...+...| ++++++++.+++|.+|++. .+++|++++++||||||.+++.+++++|+++|++
T Consensus 88 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~ 167 (350)
T TIGR03537 88 RRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCRE 167 (350)
T ss_pred ceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 57888777766 888889999 9999999866688777443 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+|+++|+||+|.++.+++...++... ..+++++++|+||.+|++|+|+||+++++++ .+.+.........
T Consensus 168 ~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~--------~~~~~~~~~~~~~ 237 (350)
T TIGR03537 168 HGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAGDEKL--------ISFLRKLRANFGV 237 (350)
T ss_pred cCcEEEEeccccccccCCCCCchhhc--CcCCEEEEeecccccCCccccceeeecCHHH--------HHHHHHHHHhhcc
Confidence 99999999999987766544444443 3468999999999999999999999988777 5666666655555
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeE
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHIT 235 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~ 235 (272)
+.+...|.++.+.+.. ..+.++.+++++++++.+.+.|+..|+++..+++++|+|+.++. .+..++...|++ +||.
T Consensus 238 ~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~~-~gv~ 314 (350)
T TIGR03537 238 ASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGIDAKDYALRLLE-NGIV 314 (350)
T ss_pred CCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEEEEECCCCCCHHHHHHHHHH-CCEE
Confidence 5666778877776653 35668889999999999999999999988888889999999984 356777777776 4999
Q ss_pred eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
+.||..|+....+++|++++.+++++++++++|++
T Consensus 315 v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 315 VAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred EcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 99999998666789999987788999999999976
No 34
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=4.6e-40 Score=288.05 Aligned_cols=266 Identities=21% Similarity=0.215 Sum_probs=207.0
Q ss_pred cccccccCccc-chHH-hcccc-eeEEeecCCCCCcccCCCCC-------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDE-VGKYC-NIEYLECGPGNNFFPDLKGT-------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~dl~~~-------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|++. |... ....| +++++|++++++|.+|++.+ ++++++++++||||||.+++.+++++|+++
T Consensus 120 d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~ 199 (433)
T PRK06855 120 ARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDI 199 (433)
T ss_pred CeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHH
Confidence 67888888877 4433 22346 88899998777887775442 467899999999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
|+++|++||+||+|.++.+++. ..++..+.. ..++|+++||||.+++||+|+||+++++......+.++...+.....
T Consensus 200 a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~ 278 (433)
T PRK06855 200 AREYDLFIICDEIYNNIVYNGKKTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKM 278 (433)
T ss_pred HHHcCCEEEEeccccccccCCCCCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhc
Confidence 9999999999999999988653 345555532 23579999999999889999999998531100000111333332222
Q ss_pred hccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC-----------
Q 036024 153 TCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR----------- 219 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~----------- 219 (272)
....++.+.|.++.+++.+.. .++++++++.++++++.+.+.|+++ |+.+..|++|+|+|+.++..
T Consensus 279 -~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~ 357 (433)
T PRK06855 279 -IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIE 357 (433)
T ss_pred -cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcc
Confidence 233477899999999998654 4789999999999999999999887 88888888999999999842
Q ss_pred -----------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 220 -----------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 220 -----------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
++.+++..+++++||.+.||+.|+..+ .++|+|++. +.+++++++++|++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~-~~~Rls~~~~~~~~i~~~~~~l~~~~ 427 (433)
T PRK06855 358 NPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTEL-NGFRVTLLERDEEKFEWIYQTLAEKI 427 (433)
T ss_pred hhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCC-CceEEEECCCcHHHHHHHHHHHHHHH
Confidence 356777788888999999999997543 459999975 8899999999998864
No 35
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7e-40 Score=283.63 Aligned_cols=260 Identities=28% Similarity=0.425 Sum_probs=215.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCC-CCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG-NNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|.+. |...++..| +++++|++.+ .+|.+|++.+ ++++++++++||||||.+++.+++++|+++|+
T Consensus 109 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~ 188 (382)
T PRK06108 109 DEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCR 188 (382)
T ss_pred CEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHH
Confidence 56777766655 778888889 9999999753 3666664432 57899999999999999999999999999999
Q ss_pred HcCCEEEEcccCCccccC-CC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 76 NNGSIIIFDSAYAAYVTD-GC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~-~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
++++++|+||+|.++.++ +. ..++..+....+++++++||||.||++|+|+||+++++++ ++.+......
T Consensus 189 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~--------~~~~~~~~~~ 260 (382)
T PRK06108 189 RHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPAL--------GQVLEKLIEY 260 (382)
T ss_pred HCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHH--------HHHHHHHHHh
Confidence 999999999999998876 22 2333344333468999999999999999999999998877 5566555544
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC-CChHHHHHHHHHh
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEK 231 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~ 231 (272)
...+++.+.|.++..++.+ ..+++++.+++++++++.+.+.|++. |+.+..+++++|+|+.+++ .+..+++.+++++
T Consensus 261 ~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~ 339 (382)
T PRK06108 261 NTSCVAQFVQRAAVAALDE-GEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVDE 339 (382)
T ss_pred cccCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHHh
Confidence 4556788999999999974 35678899999999999999999887 8888888889999999974 3566788888888
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||+.|++.+.+++|+|++.+++++++++++|++++
T Consensus 340 ~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 340 AGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFL 380 (382)
T ss_pred CCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 89999999999766678999999779999999999998864
No 36
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=5.8e-40 Score=284.94 Aligned_cols=260 Identities=26% Similarity=0.432 Sum_probs=216.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++++++++++++..++++ .++++++++++||||||.+++.+++++|+++|++
T Consensus 116 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~ 195 (395)
T PRK08175 116 DTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKR 195 (395)
T ss_pred CEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 67788777666 667778888 9999999877666444443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+|+++|+||+|.++.+++. ..++..+.+..+++++++||||.||+||+|+||+++++++ ++.+.+......
T Consensus 196 ~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l--------~~~~~~~~~~~~ 267 (395)
T PRK08175 196 YDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPEL--------VSALARIKSYHD 267 (395)
T ss_pred cCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHH--------HHHHHHHHhhcc
Confidence 9999999999999887653 3444444444567899999999999999999999998877 667776665555
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC----ChHHHHHHHHHh
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR----KSWDVFAEILEK 231 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~----~~~~~~~~ll~~ 231 (272)
.+++.+.|.++..++.. ...+++++++.++++++++.+.|+.+|+.+..+++|+|+|++++.. ++.+++..++++
T Consensus 268 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~ 346 (395)
T PRK08175 268 YGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNE 346 (395)
T ss_pred cCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHh
Confidence 56777888888888863 4578899999999999999999999998888888999999999842 356777788888
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||+.|+..+++++|+++..+++.+.+++++|.+++
T Consensus 347 ~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 347 AKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMF 387 (395)
T ss_pred CCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 89999999999876678999999878899999999998764
No 37
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.2e-39 Score=286.85 Aligned_cols=262 Identities=18% Similarity=0.248 Sum_probs=209.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...+...| +++++++.++++|.+|++.+ +++++++++|||||||.+++.+++++|+++|++
T Consensus 156 d~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~ 235 (462)
T PLN02187 156 ANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARK 235 (462)
T ss_pred CEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHH
Confidence 67888777766 777788889 99999997666788885542 578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++++||+||+|.++.+++.. .++..+.. ..++++++||||.|++||+|+||+++++ +.+. .++..+.......
T Consensus 236 ~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~-~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~----~~~~~~~~~~~~~ 310 (462)
T PLN02187 236 LGIMVISDEVYDRTIFGDNPFVSMGKFAS-IVPVLTLAGISKGWVVPGWKIGWIALNDPEGVF----ETTKVLQSIKQNL 310 (462)
T ss_pred CCCEEEEeccccccccCCCCceeHHHhcc-CCcEEEEecchhhcCCccceeEEEEecCchhHH----HHHHHHHHHHHhc
Confidence 99999999999998886533 35555532 2468999999999999999999999853 2210 0123444444433
Q ss_pred cC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC-e-EecCCCceEEEeecCC-----C-ChHHH
Q 036024 155 FN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI-K-VYGGINAPYVWAHFPG-----R-KSWDV 224 (272)
Q Consensus 155 ~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~-~~~~~~~~~~~i~l~~-----~-~~~~~ 224 (272)
.. +++.+.|.++.+++.+....++++.++.++++++.+.+.|++++. . +..|++|+|+|+.++. . ++.++
T Consensus 311 ~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~ 390 (462)
T PLN02187 311 DVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDF 390 (462)
T ss_pred cccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHH
Confidence 33 357899999999997545688999999999999999999998853 3 2356789999998752 1 45577
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 225 FAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+.++++++||.+.||+.|+. ++++|++++.+++++++++++|.+++
T Consensus 391 ~~~ll~~~gV~v~pG~~fg~--~~~iRis~~~~~e~l~~al~rL~~~l 436 (462)
T PLN02187 391 CVKLAREENLVFLPGDALGL--KNWMRITIGVEAHMLEDALERLKGFC 436 (462)
T ss_pred HHHHHhhCCEEEECccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 88888888999999999963 68999999888999999999998763
No 38
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=8e-40 Score=287.03 Aligned_cols=254 Identities=16% Similarity=0.177 Sum_probs=208.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..|++. |...++..| +++++|++++ ++.+| +++ .+++|+++++ |||||||.+++.+++++|+++|+++
T Consensus 166 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~ 244 (431)
T PRK15481 166 DSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARY 244 (431)
T ss_pred CEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence 67888888777 888889999 9999999755 55444 322 1578999998 9999999999999999999999999
Q ss_pred -CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 -GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 -~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+++||+||+|.++.+.+. .+.... ..+++++++||||++| ||+|+||+++++++ ++.+.........
T Consensus 245 ~~~~ii~De~Y~~~~~~~~-~~~~~~--~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~--------~~~~~~~~~~~~~ 312 (431)
T PRK15481 245 PQVLVIIDDHFALLSSSPY-HSVIPQ--TTQRWALIRSVSKALG-PDLRLAFVASDSAT--------SARLRLRLNSGTQ 312 (431)
T ss_pred CCceEEecCchhhhccCCC-CCCCcC--CCCCEEEEeeeccccC-CCceeEEEeCCHHH--------HHHHHHHHhcccc
Confidence 999999999999876542 222222 3468999999999999 99999999999887 5666555554445
Q ss_pred CcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024 157 GASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT 235 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~ 235 (272)
+.+.++|.++.+++.+... +++++.++.++++++.+.+.|++.|+.+..|++|+|+|+.++. +..++...+. ++||.
T Consensus 313 ~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~-~~~~~~~~l~-~~gV~ 390 (431)
T PRK15481 313 WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT-DSQATALTLA-KSGWL 390 (431)
T ss_pred CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC-CHHHHHHHHH-HCCcE
Confidence 5889999999999986554 7889999999999999999999999888778899999999985 4556666665 56999
Q ss_pred eeCCCCCCCC-CCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 236 TVPGSGFGPG-GEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 236 v~~g~~~~~~-~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
+.||+.|+.. +.+++|++++. +++++++++++|++++
T Consensus 391 v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 391 VREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQAL 429 (431)
T ss_pred EecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence 9999999643 34689999965 7889999999999874
No 39
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=281.81 Aligned_cols=259 Identities=22% Similarity=0.311 Sum_probs=209.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..|++. +...++..| ++++++.+.+.++.+| +++ .+++|+++++|||||||.+++.+++++|+++|+++|
T Consensus 114 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~ 193 (389)
T PRK05957 114 DEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHG 193 (389)
T ss_pred CEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcC
Confidence 66778766654 666677888 9999998643333333 322 267999999999999999999999999999999999
Q ss_pred CEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 79 SIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
+++|+||+|.++.+++.. .++..+.+..+++|+++||||.+|+||+|+||+++++++ ++.+.........+
T Consensus 194 ~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~--------~~~~~~~~~~~~~~ 265 (389)
T PRK05957 194 IYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHL--------LEAIKKIQDTILIC 265 (389)
T ss_pred cEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHH--------HHHHHHHHhhcccC
Confidence 999999999998876532 234444334568999999999999999999999998887 67777776665666
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-C-CeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-G-IKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI 234 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g-~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi 234 (272)
++.+.|.++..++.+ +..++++.+++++++++.+.+.|+.+ + +.+..+++|+|+|++++ +.++.+++.++++++||
T Consensus 266 ~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv 344 (389)
T PRK05957 266 PPVVSQYAALGALQV-GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRV 344 (389)
T ss_pred CCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCE
Confidence 788899998888874 33566778888999999999999987 5 36677788999999997 55677888998887899
Q ss_pred EeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024 235 TTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL 271 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~ 271 (272)
.+.||+.|+..+.+++|++++ .+++++.+++++|.+.
T Consensus 345 ~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~ 382 (389)
T PRK05957 345 AVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQG 382 (389)
T ss_pred EEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHH
Confidence 999999998666679999995 4788899999998775
No 40
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-39 Score=283.53 Aligned_cols=264 Identities=17% Similarity=0.203 Sum_probs=207.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...+...| +++.++++++++|.+|++.+ +++++++++|||||||.+++.+++++|+++|++
T Consensus 122 d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~ 201 (409)
T PLN00143 122 ANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARK 201 (409)
T ss_pred CEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHH
Confidence 66788777766 888888889 99999997666887775542 578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++++||+||+|.++.+++.. .++..+. ..+++++++||||.|++||+|+||++++ ++.+.+. ......+.......
T Consensus 202 ~~~~ii~De~Y~~l~~~~~~~~~~~~~~-~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~-~~~~~~~~~~~~~~ 279 (409)
T PLN00143 202 LGILVIADEVYGHIVFGSKPFVPMGLFA-SIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQI-CEIADSIKKALNPA 279 (409)
T ss_pred cCCeEEEEccccccccCCCCCcchhhhc-ccCcEEEEccchhhcCCCccceEEEEeeCchhhhhh-HHHHHHHHHHHhcc
Confidence 99999999999998886543 3334442 3458999999999999999999999984 3321100 01123333333322
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC-eE-ecCCCceEEEeecCC------CChHHHHH
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI-KV-YGGINAPYVWAHFPG------RKSWDVFA 226 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~-~~~~~~~~~~i~l~~------~~~~~~~~ 226 (272)
. .++.+.|.++.+++.+....++++.++.++++++.+.+.|.+++. .+ ..|++|+|+|++++. .++.+++.
T Consensus 280 ~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~ 358 (409)
T PLN00143 280 P-FPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCL 358 (409)
T ss_pred C-CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHH
Confidence 2 357789999999997545578889999999999999999988743 32 357789999999973 24667777
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++++++||.+.||..|+. .+++|++++.+++++++++++|++++
T Consensus 359 ~ll~~~gV~v~pg~~f~~--~~~iRi~~~~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 359 KLAKEESLIILPGVTVGL--KNWLRITFAVEQSSLEDGLGRLKSFC 402 (409)
T ss_pred HHHHhCCEEEeCccccCC--CCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 888888999999999964 68999999888999999999998764
No 41
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-39 Score=284.58 Aligned_cols=263 Identities=17% Similarity=0.242 Sum_probs=211.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...+...| +++.+++.++.+|.+|++.+ +++++++++|||||||.+++.+++++|+++|++
T Consensus 142 d~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~ 221 (430)
T PLN00145 142 ANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARK 221 (430)
T ss_pred CEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 67888877776 777778888 99999987777888885542 678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEec--ccccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP--EELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~--~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+++++|+||+|.++.+++. ..++..+. ..+++++++||||.|++||+|+||++++ +..+.. ..+...+.....
T Consensus 222 ~~i~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~--~~~~~~~~~~~~- 297 (430)
T PLN00145 222 LGILVIADEVYDHLTFGSKPFVPMGVFG-EVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKE--TKVVDSIRNYLN- 297 (430)
T ss_pred cCCEEEEeccchhhccCCCCccchhhhc-ccCcEEEEeccccccCCCCeeEEEEEEecchhhhhh--hHHHHHHHHHhc-
Confidence 9999999999999888653 34544443 2468999999999999999999999974 222110 001223333322
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cCCCceEEEeecCC------CChHHHH
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY-GGINAPYVWAHFPG------RKSWDVF 225 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~i~l~~------~~~~~~~ 225 (272)
....++.+.|.|+..++......++++.++.++++++.+.+.|+++ |+.+. .|++++|+|+.++. .++.+++
T Consensus 298 ~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~ 377 (430)
T PLN00145 298 ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFC 377 (430)
T ss_pred ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHH
Confidence 3334678999999999985456788999999999999999999987 77764 68899999999862 2466788
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.++++++||.+.||..|+. ++++|+++..+.+++++++++|++++
T Consensus 378 ~~ll~~~gV~v~pG~~fg~--~~~lRis~~~~~~~l~~al~rl~~~~ 422 (430)
T PLN00145 378 CKLAKEESVVVLPGSALGM--KNWLRITFAIDPPSLEDGLERLKSFC 422 (430)
T ss_pred HHHHHhCCEEEeCccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 8899999999999999975 68999999888889999999998763
No 42
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1e-39 Score=286.25 Aligned_cols=257 Identities=25% Similarity=0.353 Sum_probs=220.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCC---CCceEEEEe-cCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT---SRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~---~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. ....++..| +++++|++++ |+.+| ++.. .++|++|++ +.|||||.++|.+++++|+++|++
T Consensus 180 d~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~-G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~ 258 (459)
T COG1167 180 DTVLVEDPTYPGALQALEALGARVIPVPVDED-GIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEK 258 (459)
T ss_pred CEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC-CCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHH
Confidence 67888887777 778889999 9999999955 88888 4442 479999999 889999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCC-CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
||++||+||.|+.+.+++.+. ++..++ ..++||+++||||+++ ||+|+||+++++++ ++.+...+....
T Consensus 259 ~~~~IIEDD~y~el~~~~~p~~~l~~ld-~~~rViy~gSFSK~l~-PglRlG~vv~p~~~--------~~~~~~~k~~~~ 328 (459)
T COG1167 259 YDVLIIEDDYYGELRYDGPPPPPLKALD-APGRVIYLGSFSKTLA-PGLRLGYVVAPPEL--------IEKLLRLKQAAD 328 (459)
T ss_pred cCCeEEeeCcchhhhcCCCCCCChHhhC-CCCCEEEEeeehhhcc-cccceeeeeCCHHH--------HHHHHHHHHHhc
Confidence 999999999999999986543 456664 3689999999999996 99999999999998 788988898899
Q ss_pred CCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC---CCeEecCCCceEEEeecCCC-ChHHHHHHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL---GIKVYGGINAPYVWAHFPGR-KSWDVFAEILE 230 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~ 230 (272)
.+++.+.|.++...+.+..+ +|++++++.|+++++.+.+.|.+. +..+..|.+|+|+|+.++.. +..++...+++
T Consensus 329 ~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a~~ 408 (459)
T COG1167 329 LGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDARELLAAALE 408 (459)
T ss_pred CCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCHHHHHHHHHH
Confidence 99999999999999995444 899999999999999999999987 47788899999999999954 56666666665
Q ss_pred hcCeEeeC-CCCCCCCC--CCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 231 KTHITTVP-GSGFGPGG--EEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 231 ~~gi~v~~-g~~~~~~~--~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
+ |+.+.| |..|...+ .+++|++++. +++++++++++|.+++
T Consensus 409 ~-gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~ 453 (459)
T COG1167 409 K-GVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALL 453 (459)
T ss_pred C-CCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 5 999999 88887543 6689999855 7889999999887653
No 43
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=2e-39 Score=287.65 Aligned_cols=260 Identities=20% Similarity=0.267 Sum_probs=207.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..|++. |...++..| ++++++++++++|.+|++.+ +++|+++++|||||||.+++.+++++|
T Consensus 164 D~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i 243 (481)
T PTZ00377 164 DGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEI 243 (481)
T ss_pred CEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHH
Confidence 67888887777 888888899 99999999887888885542 178999999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCC--CCCccc----cCCC---CCceEEEecCccc-cCCCccceeEEEe---cccccc
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGC--PRSIYE----IPGA---REVAIEISSFSKF-SGFTGVRLGWTVV---PEELLF 137 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~----~~~~---~~~~i~~~s~sK~-~g~~g~r~G~~~~---~~~~~~ 137 (272)
+++|++++++||+||+|.++.+++. ..++.. +... ..++++++||||. +|+||+|+||+++ ++++
T Consensus 244 ~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~l-- 321 (481)
T PTZ00377 244 IKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEV-- 321 (481)
T ss_pred HHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHH--
Confidence 9999999999999999999888532 234322 2211 1368999999997 5889999999987 6666
Q ss_pred cCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc----c-----HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC
Q 036024 138 SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE----G-----LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI 207 (272)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 207 (272)
++.+..... ...+++.++|.++..++... . .+++++.++.++++++.+.+.|+++ |+++..|+
T Consensus 322 ------i~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~ 394 (481)
T PTZ00377 322 ------REQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVE 394 (481)
T ss_pred ------HHHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCC
Confidence 666766554 33358889999999998631 1 1344555567899999999999988 89999999
Q ss_pred CceEEEeecC--CC-----------ChHHHHHHHHHhcCeEeeCCCCCCCC-CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 208 NAPYVWAHFP--GR-----------KSWDVFAEILEKTHITTVPGSGFGPG-GEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 208 ~~~~~~i~l~--~~-----------~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+|+|+|++++ .. .+.+++..+++++||.+.||+.|+.. +.+++|+|+..+++++++++++|++++
T Consensus 395 gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~ 473 (481)
T PTZ00377 395 GAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFH 473 (481)
T ss_pred eeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence 9999998764 11 23456678888899999999999853 467999999877889999999998763
No 44
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-39 Score=282.11 Aligned_cols=258 Identities=23% Similarity=0.335 Sum_probs=215.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...+...+ ++++++++.+++|.+|++. .++++++++++|+||||.+++.+++++|+++|++
T Consensus 118 d~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~ 197 (402)
T PRK06107 118 DEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLR 197 (402)
T ss_pred CEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence 56777777554 777777777 8888888766677776443 2578999999999999999999999999999999
Q ss_pred c-CCEEEEcccCCccccCCC-CCCcccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 77 N-GSIIIFDSAYAAYVTDGC-PRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~-~~~vi~D~~~~~~~~~~~-~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+ ++++|+||+|.++.+++. ..++..+ .+..+++++++||||.||+||+|+||+++++++ ++.+......
T Consensus 198 ~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~--------~~~~~~~~~~ 269 (402)
T PRK06107 198 HPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADL--------IAAINKLQSQ 269 (402)
T ss_pred cCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHH--------HHHHHHHHHh
Confidence 8 999999999998877653 3444444 233578999999999999999999999999888 6777777776
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC------------CC
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG------------RK 220 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~------------~~ 220 (272)
...+++.+.|.++..++.. ...++++.++.++++++.+.+.|+++ |+++..+++|+|+|+.++. .+
T Consensus 270 ~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~ 348 (402)
T PRK06107 270 SSSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLET 348 (402)
T ss_pred cccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCC
Confidence 6677999999999999974 35788999999999999999999987 8888888999999998742 14
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+.+++..+++++||.+.||+.|+. .+++|++++.+++++++++++|++++
T Consensus 349 ~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~~~~e~l~~~l~~l~~~l 398 (402)
T PRK06107 349 DQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIATSLETLEEACARIERAV 398 (402)
T ss_pred HHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 467788888888999999999975 57999999889999999999998763
No 45
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-39 Score=281.87 Aligned_cols=259 Identities=29% Similarity=0.442 Sum_probs=216.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...+...| +++.+|++.++++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 118 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~ 197 (391)
T PRK08361 118 DEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAED 197 (391)
T ss_pred CEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHH
Confidence 56777776655 778888888 9999999877677777444 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+++. ..++... ..+++++++|+||.+|++|+|+||++++++. ++.+........
T Consensus 198 ~~~~ii~De~y~~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~--------~~~~~~~~~~~~ 267 (391)
T PRK08361 198 YNIYILSDEPYEHFLYEGAKHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIAPEQV--------IKDMIKLHAYII 267 (391)
T ss_pred cCeEEEEEcccccceeCCCCCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhccCHHH--------HHHHHHHHhhhc
Confidence 9999999999999877542 2333333 3467899999999999999999999998877 556655554445
Q ss_pred CCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CChHHHHHHHHHh
Q 036024 156 NGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RKSWDVFAEILEK 231 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~ 231 (272)
.+.+.+.|.++..++.+... +++++.++.++++++.+.+.|+.+ |+.+..+++++|+|+.++. .+..++...++++
T Consensus 268 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~ 347 (391)
T PRK08361 268 GNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEK 347 (391)
T ss_pred cCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHh
Confidence 56788899999999986443 678999999999999999999988 8888888889999999973 4677888888887
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||..|+..+.+++|+++..+++++.+++++|++++
T Consensus 348 ~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l 388 (391)
T PRK08361 348 ARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKAL 388 (391)
T ss_pred CCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 89999999999876678999999888889999999998764
No 46
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=3.6e-39 Score=280.61 Aligned_cols=263 Identities=17% Similarity=0.223 Sum_probs=209.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| ++++++++.++++.+|++.+ +++++++++|||||||.+++.+++++|+++|++
T Consensus 120 d~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~ 199 (401)
T TIGR01264 120 QNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAER 199 (401)
T ss_pred CEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 56777777665 788888899 99999987666677774432 568999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+++. ..++..+.. ..++|+++||||+|++||+|+||+++++... ....+++.+..... ..
T Consensus 200 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~--~~~~~~~~~~~~~~-~~ 275 (401)
T TIGR01264 200 QCLPIIADEIYGDMVFSGATFEPLASLSS-TVPILSCGGLAKRWLVPGWRLGWIIIHDRRG--ILRDIRDGLVKLSQ-RI 275 (401)
T ss_pred CCCEEEEEhhhhhhccCCcccccHHHcCC-CCcEEEEccCcccCCCccceEEEEEecCcch--hHHHHHHHHHHHhh-cc
Confidence 9999999999999887653 344444432 2358999999999999999999999875210 00111333433332 23
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC------CChHHHHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG------RKSWDVFAEI 228 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~------~~~~~~~~~l 228 (272)
.+++.+.|.++..++.+...+++++.++.++++++.+.+.|+.+ |+.+..|++|+|+|+.++. .++.+++.++
T Consensus 276 ~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l 355 (401)
T TIGR01264 276 LGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERL 355 (401)
T ss_pred CCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCCHHHHHHHH
Confidence 44788999999999975445788999999999999999999998 7777778899999999752 2456778888
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++++||.+.||+.|+. ++++|++++.+++++++++++|.+++
T Consensus 356 ~~~~gI~v~pg~~f~~--~~~iRis~~~~~~~l~~~l~rl~~~~ 397 (401)
T TIGR01264 356 VAEQSVFCLPGSCFEY--PGFFRVVLTVPVVMMEEACSRIQEFC 397 (401)
T ss_pred HHhCCEEEeCchhcCC--CCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 8788999999998864 68999999888899999999998764
No 47
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=3.9e-39 Score=279.24 Aligned_cols=259 Identities=24% Similarity=0.289 Sum_probs=213.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCC-CCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG-NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|.+. |...++..| ++++++++++ .++.+|+++ .++++++++++||||||.+++.+++++|+++|+
T Consensus 110 d~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~ 189 (387)
T PRK07777 110 DEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAV 189 (387)
T ss_pred CEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHH
Confidence 66777776665 777778888 9999999876 356677544 267899999999999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++++++|+||+|.++.+++. ..++..+.+..+++++++||||.||+||+|+||+++++++ ++.+.......
T Consensus 190 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l--------~~~~~~~~~~~ 261 (387)
T PRK07777 190 EHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPL--------IAAVRAAKQYL 261 (387)
T ss_pred hcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHH--------HHHHHHHHhhc
Confidence 99999999999998887543 3455555544678999999999999999999999999887 56666555544
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---CChHHHHHHHHHh
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---RKSWDVFAEILEK 231 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~ 231 (272)
....+.+.|.++..++.. ...+.++.++.++++++.+.+.|++.|+++..+++++|+|+.++. .++.+++..|+++
T Consensus 262 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 340 (387)
T PRK07777 262 TYVGGAPFQPAVAHALDH-EDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPER 340 (387)
T ss_pred ccCCCCHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEecccccCCCCHHHHHHHHHHh
Confidence 445677788888888864 357788999999999999999999999998888889999999752 3567888888888
Q ss_pred cCeEeeCCCCCCC---CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 232 THITTVPGSGFGP---GGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 232 ~gi~v~~g~~~~~---~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+||.+.||+.|+. .+.+++|++++.+++++++++++|+++
T Consensus 341 ~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~ 383 (387)
T PRK07777 341 VGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRAL 383 (387)
T ss_pred CCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 8999999998863 235789999988899999999999875
No 48
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.7e-39 Score=281.20 Aligned_cols=262 Identities=18% Similarity=0.308 Sum_probs=210.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| +++++|++++.++.+|++. .+++++++++|||||||.+++.+++++|+++|++
T Consensus 129 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~ 208 (412)
T PTZ00433 129 DNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEE 208 (412)
T ss_pred CEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHH
Confidence 66778777666 888889999 9999999876677777443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+|++||+||+|.++.+++.. .++..+.. ..++++++||||.+|+||+|+||++++ ++... +.+++.+..... .
T Consensus 209 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~---~~~~~~~~~~~~-~ 283 (412)
T PTZ00433 209 LRLPLISDEIYAGMVFNGATFTSVADFDT-TVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNG---GDFLDGMKRLGM-L 283 (412)
T ss_pred cCCeEEEeccccccccCCCCccchhhccC-CCceEEEccchhhcCCCCeeEEEEEEeCCcccH---HHHHHHHHHHhh-c
Confidence 99999999999998876532 34445432 235799999999999999999999972 21100 011444444333 2
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC------CChHHHHHH
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG------RKSWDVFAE 227 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~------~~~~~~~~~ 227 (272)
..+++.+.|.++.+++.+....++++.++.++++++.+.+.|+.+ |+.+..|++|+|+|+.++. .+..+++..
T Consensus 284 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ 363 (412)
T PTZ00433 284 VCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEK 363 (412)
T ss_pred cCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHH
Confidence 345888999999999875445788999999999999999999986 7888888899999999863 145788888
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++++||.+.||+.|+. .+++|+++...++++.+++++|.+++
T Consensus 364 ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~l~~al~~l~~~~ 406 (412)
T PTZ00433 364 LLEEENVQVLPGEIFHM--PGFTRLTISRPVEVLREAVERIKAFC 406 (412)
T ss_pred HHHhcCEEEeCccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 88777999999999964 57999999888889999999998763
No 49
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=3.5e-39 Score=288.25 Aligned_cols=262 Identities=23% Similarity=0.330 Sum_probs=207.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...+...| ++++++++++++|.+|++. .+++|+++++|||||||.+++.+++++|+++|++
T Consensus 233 d~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~ 312 (517)
T PRK13355 233 DEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIARE 312 (517)
T ss_pred CEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence 67888888777 778888888 9999999888789888554 2689999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEec--ccccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP--EELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~--~~~~~~~~~~~~~~~~~~~~~ 153 (272)
|+++||+||+|.++.+++. ..++..+.. ...+++++||||.|+++|+|+||++++ ++... .+++.+... ..
T Consensus 313 ~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~-~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~----~~~~~l~~~-~~ 386 (517)
T PRK13355 313 HQLIIFSDEIYDRLVMDGLEHTSIASLAP-DLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK----DYIEGLNML-AN 386 (517)
T ss_pred cCcEEEEehhhhhhcCCCCCcccHHHhCC-CCeEEEEecchhhccCcccceEEEEeeCchhhHH----HHHHHHHHH-hc
Confidence 9999999999999988753 445555521 234678899999999999999999965 33210 012333322 22
Q ss_pred ccCCcchHHHHHHHHhccccc--HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC-----CChHHHH
Q 036024 154 CFNGASNIAQAGGLACLSSEG--LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG-----RKSWDVF 225 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~-----~~~~~~~ 225 (272)
.....+.++|.++..++.... .+++++. +++.++++.+.+.|+++ |+++..|++++|+|++++. .++.+++
T Consensus 387 ~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~ 465 (517)
T PRK13355 387 MRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNAIPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFA 465 (517)
T ss_pred CcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecCcccCCCCCHHHHH
Confidence 333478899999999986432 2455554 34456679999999988 8999999999999999863 2456778
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.++++++||.+.||+.|+..+++++|+++..+++++++++++|++++
T Consensus 466 ~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~ 512 (517)
T PRK13355 466 LDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMDRLADFF 512 (517)
T ss_pred HHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 88888889999999999866789999999888999999999998764
No 50
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4e-39 Score=273.44 Aligned_cols=248 Identities=20% Similarity=0.279 Sum_probs=191.7
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
.+++..|++. |...++..| +++++|++.. +..++.-+..++|+++++|||||||.+++.+++++|+++|++++++||
T Consensus 81 ~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~-~~~~~~l~~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI 159 (332)
T PRK06425 81 NIIIVEPNFNEYKGYAFTHGIRISALPFNLI-NNNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLF 159 (332)
T ss_pred cEEEeCCChHHHHHHHHHcCCeEEEEeCCcc-cCcHHHHhhcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEE
Confidence 3555555554 889999999 9999999753 332332112588999999999999999999999999999999999999
Q ss_pred EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHH
Q 036024 83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162 (272)
Q Consensus 83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (272)
+||+|.++.+++ ..+...+....+++++++||||++|+||+|+||+++++++ ++.+...... ...+.++
T Consensus 160 ~DE~Y~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~l--------i~~l~~~~~~--~~~~~~~ 228 (332)
T PRK06425 160 IDEAFIDFVPNR-AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYN--------MKISRKITEP--WSVCDPA 228 (332)
T ss_pred Eecchhcccccc-chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHH--------HHHHHHcCCC--CccCHHH
Confidence 999999987654 2234444334478999999999999999999999999887 5556543322 2233333
Q ss_pred HHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024 163 QAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG 241 (272)
Q Consensus 163 ~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~ 241 (272)
+. ++.... ..+.++.++.++++++.+.+.|+++|+.+..+.+|+|+|+.++ +..++...++++ ||.+.||+.
T Consensus 229 ~~----~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~--~~~~~~~~l~~~-gi~v~~~~~ 301 (332)
T PRK06425 229 ID----FIRSIDLDYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMIP--DAHDFYSYLLKN-GILVRLLDD 301 (332)
T ss_pred HH----HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEEcC--CHHHHHHHHHHC-CeEEEECCC
Confidence 22 232222 3556788999999999999999999988875557899999987 566777777765 999999999
Q ss_pred CCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 242 FGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|+..+++++|+++. ++++.++++++|++++
T Consensus 302 f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 302 YECLGEQYIRIAIR-RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence 97555789999985 6778999999998764
No 51
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=7.2e-39 Score=279.00 Aligned_cols=264 Identities=17% Similarity=0.247 Sum_probs=208.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |.......| +++.+|++++.++.+|++.+ ++++++++++||||||.+++.+++++|+++|++
T Consensus 121 d~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~ 200 (409)
T PLN02656 121 ANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEK 200 (409)
T ss_pred CeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Confidence 67888877776 666667778 99999997666777775542 578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 154 (272)
+++++|+||+|.++.+++.. .++..+. ..+++|+++||||.|++||+|+||+++++. ... .-+.+++.+......
T Consensus 201 ~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~-~~~~~~~~~~~~~~~- 277 (409)
T PLN02656 201 LKILVIADEVYGHLAFGSNPFVPMGVFG-SIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSF-RDPKIVERIKKYFDI- 277 (409)
T ss_pred cCCEEEEehhhhhcccCCCCcccHHHhc-ccCcEEEEcccchhccCcceeEEEEEEeCccccc-ccHHHHHHHHHHHhh-
Confidence 99999999999999887642 3444442 346799999999999999999999998531 000 000125555554443
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCCCceEEEeecCC-----C-ChHHHHH
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGINAPYVWAHFPG-----R-KSWDVFA 226 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~i~l~~-----~-~~~~~~~ 226 (272)
..+++.+.|.++.+++.+....++++.++.++++++.+.+.|+.+ ++. +..|++|+|+|++++. . ++.+++.
T Consensus 278 ~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~ 357 (409)
T PLN02656 278 LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCF 357 (409)
T ss_pred hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHH
Confidence 234788999999999975445788999999999999999999987 343 3467889999999862 1 3446677
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++++++||.+.||+.|+. ++++|++++.+++++++++++|++++
T Consensus 358 ~~l~~~gV~v~pg~~fg~--~~~iRi~~~~~~e~l~eal~rl~~~~ 401 (409)
T PLN02656 358 KLAREESVIILPGTAVGL--KNWLRITFAADPSSLEEALGRIKSFY 401 (409)
T ss_pred HHHHhCCEEEecchhcCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 788888999999999964 68999999888999999999998763
No 52
>PLN02231 alanine transaminase
Probab=100.00 E-value=4.8e-39 Score=285.92 Aligned_cols=259 Identities=19% Similarity=0.245 Sum_probs=206.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..|++. |...++..| ++++++++++++|.+|++.+ .++|+++++|||||||.+++.+++++|
T Consensus 217 d~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~I 296 (534)
T PLN02231 217 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDI 296 (534)
T ss_pred CEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHH
Confidence 67888888777 888888889 99999999877898885542 168999999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccCCccccCC--CCCCccccC---CC---CCceEEEecCcccc-CCCccceeEEEec---cccccc
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDG--CPRSIYEIP---GA---REVAIEISSFSKFS-GFTGVRLGWTVVP---EELLFS 138 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~---~~---~~~~i~~~s~sK~~-g~~g~r~G~~~~~---~~~~~~ 138 (272)
+++|++++++||+||+|.++.+++ ...++..+. +. ..++++++|+||.+ |.||+|+||++++ +++
T Consensus 297 v~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l--- 373 (534)
T PLN02231 297 VEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDV--- 373 (534)
T ss_pred HHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHH---
Confidence 999999999999999999998853 233544432 11 23689999999976 7899999999873 445
Q ss_pred CCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc-----cH----HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC
Q 036024 139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE-----GL----EAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN 208 (272)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~----~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 208 (272)
++.+.+.... ...++...|.++..++..+ .+ ++.+++++.++++++.+.+.|+++ |+.+..|++
T Consensus 374 -----~~~l~k~~~~-~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~G 447 (534)
T PLN02231 374 -----REQIYKVASV-NLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEG 447 (534)
T ss_pred -----HHHHHHHHhh-hcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCe
Confidence 5566555443 3346778888888888632 22 234566889999999999999998 999999999
Q ss_pred ceEEEeec--CCC-----------ChHHHHHHHHHhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 209 APYVWAHF--PGR-----------KSWDVFAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 209 ~~~~~i~l--~~~-----------~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
++|+|+++ +.. .+..++.++++++||.+.||+.|+. .+..++|+++..+++++++++++|+++
T Consensus 448 gfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~ 524 (534)
T PLN02231 448 AMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEF 524 (534)
T ss_pred eeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 99999555 321 2334567789899999999999985 345689999988899999999999875
No 53
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-38 Score=273.49 Aligned_cols=258 Identities=26% Similarity=0.414 Sum_probs=215.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| ++++++.++++++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 116 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~ 195 (393)
T PRK05764 116 DEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVE 195 (393)
T ss_pred CEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHH
Confidence 56677766655 777888889 9999999877678777443 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCcccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+++++|+||+|.++.+++. ..++..+ .+..+++++++|+||.+|++|+|+||+++++++ .+.+.......
T Consensus 196 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~--------~~~~~~~~~~~ 267 (393)
T PRK05764 196 HDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKEL--------IKAMSKLQSHS 267 (393)
T ss_pred CCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHH--------HHHHHHHHhhc
Confidence 9999999999998887543 2344444 234568899999999999999999999988877 66676666656
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC------ChHHHHHH
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR------KSWDVFAE 227 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~------~~~~~~~~ 227 (272)
..+++.+.|.++.+++.. ..+++++.++.++++++.+++.|+++ |+.+..+++++++|+.++.. ++.++...
T Consensus 268 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (393)
T PRK05764 268 TSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEA 346 (393)
T ss_pred ccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccccCCHHHHHHH
Confidence 666889999999998873 45778889999999999999999998 99988888889999999742 13677788
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++++||.+.||+.|+. .+++|+++..+++++++++++|.+++
T Consensus 347 l~~~~gi~v~~g~~f~~--~~~vRis~~~~~~~~~~~i~~l~~~~ 389 (393)
T PRK05764 347 LLEEAGVAVVPGIAFGA--PGYVRLSYATSLEDLEEGLERIERFL 389 (393)
T ss_pred HHHhCCEEEccccccCC--CCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 88888999999998865 68999999889999999999998763
No 54
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=3.2e-38 Score=274.39 Aligned_cols=258 Identities=23% Similarity=0.302 Sum_probs=207.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEe-ecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYL-ECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~-~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|++. |...++..| +++.+ +.++ .++.+|++. .+++++++++|||||||.+++.+++++|+++|+
T Consensus 118 d~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~ 196 (398)
T PRK08363 118 DEILIPGPSYPPYTGLVKFYGGVPVEYRTIEE-EGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAG 196 (398)
T ss_pred CEEEEcCCCCcchHHHHHHcCCEEEEeccccc-cCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHH
Confidence 66777777766 777778888 88888 4443 477777443 257899999999999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe--cccccccCCcchHHHHHhhhh-
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PEELLFSSGFPVINDFNRIIC- 152 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~- 152 (272)
++++++|+||+|.++.+++...++..+.. ..++++++||||.|++||+|+||+++ ++++ ++.+.....
T Consensus 197 ~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~--------~~~l~~~~~~ 267 (398)
T PRK08363 197 EHDLPVISDEIYDLMTYEGKHVSPGSLTK-DVPVIVMNGLSKVYFATGWRLGYIYFVDPEGK--------LAEVREAIDK 267 (398)
T ss_pred HcCeEEEEhhhhhhhccCCcccCHHHcCc-CCcEEEEecchhccCCccceEEEEEEeCcHHH--------HHHHHHHHHH
Confidence 99999999999998887765455555542 45799999999999999999999997 5544 333332221
Q ss_pred --hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC---CChHHHHH
Q 036024 153 --TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG---RKSWDVFA 226 (272)
Q Consensus 153 --~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~---~~~~~~~~ 226 (272)
....+.+.++|.++.+++.. ..+++++.+++++++++.+.+.|.++ ++.+..+++++++|+.++. .++.+++.
T Consensus 268 ~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~~~ 346 (398)
T PRK08363 268 LARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKEFVL 346 (398)
T ss_pred HhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHHHHH
Confidence 12235788999999988874 45788999999999999999999988 8888888889999998874 24567777
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++++++||.+.||+.|+..+++++|++++.+++++.+++++|++++
T Consensus 347 ~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 392 (398)
T PRK08363 347 DVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFM 392 (398)
T ss_pred HHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 8778889999999999866678999999888899999999998753
No 55
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-38 Score=272.62 Aligned_cols=258 Identities=26% Similarity=0.362 Sum_probs=212.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| ++++++++++.++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 115 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~ 194 (386)
T PRK07550 115 DEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARR 194 (386)
T ss_pred CEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHH
Confidence 67777776655 777888899 9999999876688777443 2578899999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.++.. +.++....+..+++++++||||.+|++|+|+||++++++. ++.+........
T Consensus 195 ~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~--------~~~~~~~~~~~~ 266 (386)
T PRK07550 195 HGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPAR--------IAEIEKFMDTVA 266 (386)
T ss_pred cCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHH--------HHHHHHHHhhcc
Confidence 9999999999998865432 2233332233567899999999999999999999998877 666766666666
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHhc
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKT 232 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~ 232 (272)
.+++.++|.++..++.. ..++.++.++.++++++.+.+.|... ++.+. +.+++|+|+.++ +.+..++..++++++
T Consensus 267 ~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~l~~~~ 344 (386)
T PRK07550 267 ICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFARLPGWELL-ASGAYFAYVRHPFPDRPSREVARRLAKEA 344 (386)
T ss_pred cCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-CCceEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 66888999999998874 44778888999999999999999986 76654 458899999997 356778888888888
Q ss_pred CeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHh
Q 036024 233 HITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEAL 271 (272)
Q Consensus 233 gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~ 271 (272)
||.+.||..|+..+.+++|++++. +++++++++++|+++
T Consensus 345 gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 345 GILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred CEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 999999999976667899999964 788999999999875
No 56
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=8.3e-38 Score=272.05 Aligned_cols=262 Identities=19% Similarity=0.304 Sum_probs=209.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...+...| +++++++++++++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 121 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~ 200 (403)
T TIGR01265 121 ANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARK 200 (403)
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHH
Confidence 66777777655 777778888 9999998766667777443 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecc--cccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE--ELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~--~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|+++|+||+|.++.+++. ..++..+.. ..++++++||||.|++||+|+||+++++ ..+.. ++.+.+.....
T Consensus 201 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~---~~~~~~~~~~~- 275 (403)
T TIGR01265 201 LGIPIIADEIYGHMVFGDAPFIPMASFAS-IVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRD---TVLQGLKNLLQ- 275 (403)
T ss_pred CCCEEEEEccccccccCCCCccchhhhcc-CCcEEEEeecccccCCCcceEEEEEEeCchhhhHH---HHHHHHHHHhh-
Confidence 9999999999999887753 245555532 3468999999999999999999999853 33110 01222322222
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC------ChHHHHH
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR------KSWDVFA 226 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~------~~~~~~~ 226 (272)
....++.+.|.++..++.+....++++.+++++++++.+.+.|+.+ |+.+..|++|+|+|++++.. ++.+++.
T Consensus 276 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~ 355 (403)
T TIGR01265 276 RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCE 355 (403)
T ss_pred hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCCCCHHHHHH
Confidence 2334788999999999976556788999999999999999999987 78877788999999999732 5677888
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+++++||.+.||+.|+. .+++|++++.+++++++++++|++++
T Consensus 356 ~l~~~~gv~v~pg~~f~~--~~~iRis~~~~~~~l~~~l~~l~~~~ 399 (403)
T TIGR01265 356 KLVREESVICLPGSAFGL--PNWVRITITVPESMLEEACSRIKEFC 399 (403)
T ss_pred HHHHhCCEEEeCccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 888888999999999964 68999999888889999999998763
No 57
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.4e-37 Score=266.19 Aligned_cols=253 Identities=23% Similarity=0.406 Sum_probs=202.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC---CCC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD---LKG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d---l~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..|.+. |...++..| ++++++++.+++|.+| ++. ..+++++++++||||||.+++.+++++|+++|+++
T Consensus 94 ~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~ 173 (354)
T PRK06358 94 KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKR 173 (354)
T ss_pred CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhc
Confidence 56677766666 888888889 9999999877677776 222 25689999999999999999999999999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
++++|+||+|.++.+++.+.+........+++++++||||.+|+||+|+||++++++.+ .+.+..... ..+
T Consensus 174 ~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~-------~~~~~~~~~--~~~ 244 (354)
T PRK06358 174 NIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNL-------AEKLLQMRE--PWS 244 (354)
T ss_pred CCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHH-------HHHHHHhCC--CCc
Confidence 99999999999988776444433333345789999999999999999999999865431 455554443 345
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v 236 (272)
.+.++|.++..++.+ ..++++.++.++++++.+.+.|+++ |+.+..+ +|.|+|+.++. ..++...++++ ||.+
T Consensus 245 ~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~~--~~~~~~~l~~~-gI~v 318 (354)
T PRK06358 245 INTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP-SVNFIFFKLEK--PIDLRKELLKK-GILI 318 (354)
T ss_pred chHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-cceEEEEEcCc--hHHHHHHHHHC-CeEE
Confidence 788899999888863 3566888899999999999999987 7787776 56799999974 36777777764 9999
Q ss_pred eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.||+.|+..+++++|+++ .++++.+++++.|++++
T Consensus 319 ~~~~~f~~~~~~~iRls~-~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 319 RSCSNYRGLDENYYRVAV-KSREDNKKLLKALEVIL 353 (354)
T ss_pred EECCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHHh
Confidence 999999654578999997 57778888888887753
No 58
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-37 Score=270.40 Aligned_cols=259 Identities=25% Similarity=0.318 Sum_probs=209.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCccc-CCC---C--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFP-DLK---G--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~-dl~---~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|++. |...++..| ++++++++.+.++.. |++ . .++++++++++||||||.+++.+++++|+++|+
T Consensus 113 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~ 192 (397)
T PRK07568 113 DEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAK 192 (397)
T ss_pred CEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHH
Confidence 56777777665 777778889 999999976556653 322 2 267899999999999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhh
Q 036024 76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~ 153 (272)
++++++|+||+|.++.+++. ..++..+.+..+++++++|+||.+|++|+|+||+++++ ++ ++.+......
T Consensus 193 ~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~--------~~~~~~~~~~ 264 (397)
T PRK07568 193 KHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKEL--------IAAAMKLCQA 264 (397)
T ss_pred HCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHH--------HHHHHHHhhc
Confidence 99999999999999887653 34555555446789999999999998999999999864 44 4444443332
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHh-
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEK- 231 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~- 231 (272)
..+++.+.|.++..++.. ...++++.++.++++++.+.+.|+++ |+.+..|++++|+|++++..+..++...++++
T Consensus 265 -~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~l~~~~ 342 (397)
T PRK07568 265 -RLSPPTLEQIGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPVDDAEDFAKWLLTDF 342 (397)
T ss_pred -cCCCCcHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCCCCHHHHHHHHHhhc
Confidence 345788899999998874 45788999999999999999999987 78888888899999999865667777777764
Q ss_pred ----cCeEeeCCCCCCC--C-CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 ----THITTVPGSGFGP--G-GEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ----~gi~v~~g~~~~~--~-~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||..|+. . +++++|++++.+++++++++++|++++
T Consensus 343 ~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l 390 (397)
T PRK07568 343 NYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEAL 390 (397)
T ss_pred ccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 5999999998852 2 357999999878899999999998764
No 59
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=2.3e-37 Score=266.06 Aligned_cols=247 Identities=26% Similarity=0.346 Sum_probs=199.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
|.|++..|.+. |...++..| +++.++.. .+++. ++++++++++||||||.+++.+++++|+++|+++++++
T Consensus 112 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~------~~l~~-~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i 184 (364)
T PRK07865 112 DVVVIPELAYPTYEVGARLAGATVVRADSL------TELGP-QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVV 184 (364)
T ss_pred CEEEECCCCcccHHHHHHhcCCEEEecCCh------hhCCc-ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 66777776666 777778888 88877521 12322 67899999999999999999999999999999999999
Q ss_pred EEcccCCccccCCCCCCcccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024 82 IFDSAYAAYVTDGCPRSIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA 158 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (272)
|+||+|.++.+++...+.... ....+++++++||||.+|+||+|+||+++++++ ++.+.........+.
T Consensus 185 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~--------~~~~~~~~~~~~~~~ 256 (364)
T PRK07865 185 ASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPAL--------VAELLEVRKHAGMMV 256 (364)
T ss_pred EEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHH--------HHHHHHHHHhcCCCc
Confidence 999999988876533222211 123468999999999999999999999998887 667776665555568
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP 238 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~ 238 (272)
+.+.|.++.+++.+ .++.++.++.++++++.+.+.|++.|+.+..+++++|+|+.++. +..++... ++++||.+.|
T Consensus 257 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~-l~~~gv~v~p 332 (364)
T PRK07865 257 PAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLWATRGE-DCWDTVAW-LAERGILVAP 332 (364)
T ss_pred CHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEEEeCCC-CHHHHHHH-HHHCCEEEeC
Confidence 88999999888874 45678889999999999999999999888888889999999853 34455544 4566999999
Q ss_pred CCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024 239 GSGFGPGGEEYIRISGFGHRESILEASRRLE 269 (272)
Q Consensus 239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~ 269 (272)
|..|++.+++++|++++.+++++++++++|+
T Consensus 333 g~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 333 GDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred ccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 9988766678999999878999999999985
No 60
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-38 Score=277.86 Aligned_cols=262 Identities=22% Similarity=0.274 Sum_probs=201.1
Q ss_pred cccccccCccc-chHHhccc--c-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKY--C-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~--g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|++. |...+... | ++++++.+++++|.+|++. .+++|+++++|||||||.+++.+++++|+++|
T Consensus 191 D~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia 270 (527)
T PRK09275 191 DKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIV 270 (527)
T ss_pred CEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHH
Confidence 77888888877 77665544 4 6677777777789888543 27899999999999999999999999999999
Q ss_pred HH--cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccc-cC---C--------
Q 036024 75 RN--NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF-SS---G-------- 140 (272)
Q Consensus 75 ~~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~-~~---~-------- 140 (272)
++ ++++||+||+|.++.+. ..++... .++++|+++||||.||++|||+||++++++.+. .. +
T Consensus 271 ~~~~~~l~II~DEvY~~f~~~--~~s~~~~--~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~ 346 (527)
T PRK09275 271 NEKRPDLMIITDDVYGTFVDD--FRSLFAV--LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKEL 346 (527)
T ss_pred HhcCCCcEEEECCCChhhccc--ccCHHHh--CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHH
Confidence 64 59999999999988752 3344433 457899999999999999999999999886211 00 0
Q ss_pred -----------------cchHHHHHhhhhhccCCcchHHHHH-----HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024 141 -----------------FPVINDFNRIICTCFNGASNIAQAG-----GLACLSSEGLEAVHSVVDYYKENTKILIDTLAS 198 (272)
Q Consensus 141 -----------------~~~~~~~~~~~~~~~~~~~~~~~~a-----~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 198 (272)
.++.+........+..+.+.+.|.+ +.+++. ....+.+++++.++++++.+.+.|.
T Consensus 347 ~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~-~~~~~~~~~~~~~~~Rr~~l~~~Lg- 424 (527)
T PRK09275 347 DKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLD-EEDAYKKAMKDIIRRRYKALYEGLG- 424 (527)
T ss_pred HhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHcC-
Confidence 0111222455555666788888886 223344 3456788999999999999988883
Q ss_pred CCCeEecCCCceEEEeecCC-----------------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHH
Q 036024 199 LGIKVYGGINAPYVWAHFPG-----------------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRES 260 (272)
Q Consensus 199 ~g~~~~~~~~~~~~~i~l~~-----------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~ 260 (272)
.++....+++++|+|++++. .++.+++.+|++++||.+.||+.|+. +++++|+|+++ ++++
T Consensus 425 ~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~ 503 (527)
T PRK09275 425 LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEED 503 (527)
T ss_pred CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHH
Confidence 24444567899999999852 24678899999999999999999986 36789999975 7889
Q ss_pred HHHHHHHHHHhC
Q 036024 261 ILEASRRLEALF 272 (272)
Q Consensus 261 i~~~l~~l~~~l 272 (272)
+.++.++|++++
T Consensus 504 ~~~~~~rl~~~l 515 (527)
T PRK09275 504 YAKIGKAIRKLL 515 (527)
T ss_pred HHHHHHHHHHHH
Confidence 999999998763
No 61
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.8e-37 Score=270.06 Aligned_cols=264 Identities=22% Similarity=0.300 Sum_probs=203.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| +++.++.+.++++.+|++. .+++++++++|||||||.+++.+++++|+++|++
T Consensus 120 d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~ 199 (404)
T PRK09265 120 DEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQ 199 (404)
T ss_pred CEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 67788877776 777777788 8999988766677777443 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+|+++|+||+|.++.+++. ..++..+. ...++++++||||.+|+||+|+||++++. ... .+.+++.+... ...
T Consensus 200 ~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~---~~~~~~~~~~~-~~~ 274 (404)
T PRK09265 200 HNLIIFADEIYDKILYDGAVHISIASLA-PDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKH---AKGYIEGLDML-ASM 274 (404)
T ss_pred CCCEEEEehhhhhccCCCCCcCCHHHcC-CCceEEEEecchhhccCcccceEEEEEeCchHH---HHHHHHHHHHH-hcc
Confidence 9999999999999887653 34444443 23468999999999999999999999742 211 00112333222 223
Q ss_pred cCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC-----ChHHHHHH
Q 036024 155 FNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR-----KSWDVFAE 227 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~-----~~~~~~~~ 227 (272)
..+++.++|.++.+++..... ....+..++++++++.+.+.|+++ |+.+..|++|+|+|+.++.. ++.+.+.+
T Consensus 275 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~ 354 (404)
T PRK09265 275 RLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLD 354 (404)
T ss_pred ccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHH
Confidence 345788999999999864322 222233456788899999999887 88888888999999999742 35566777
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++++||.+.||+.|+..+++++|+++..+++++++++++|++++
T Consensus 355 ~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l 399 (404)
T PRK09265 355 LLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFL 399 (404)
T ss_pred HHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 888889999999999765678999999878999999999998764
No 62
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=4e-38 Score=270.93 Aligned_cols=252 Identities=28% Similarity=0.415 Sum_probs=212.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..|.+. |...++..| +++++|++.+.++..|++.+ + +++++++++||||||.+++.+++++|
T Consensus 94 ~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l 173 (363)
T PF00155_consen 94 DTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELREL 173 (363)
T ss_dssp SEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHH
T ss_pred ccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccch
Confidence 56777777777 888999999 99999988777888885542 2 57899999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCCCC-C-ccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGCPR-S-IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~~~-~-~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~ 148 (272)
+++|+++++++|+||+|.++.++.... + ...+. ...++++++|+||.||++|+|+||+++++++ ++.+.
T Consensus 174 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~--------~~~l~ 244 (363)
T PF00155_consen 174 AELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLD-EDDNVIVVGSLSKSFGLPGLRVGYIVAPPEL--------IERLR 244 (363)
T ss_dssp HHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHT-TTSTEEEEEESTTTTTSGGGTEEEEEEEHHH--------HHHHH
T ss_pred hhhhcccccceeeeeceeccccCCCccCccccccc-ccccceeeeeccccccccccccccccchhhh--------hhhhh
Confidence 999999999999999999988885422 2 23332 3345899999999999999999999997777 66777
Q ss_pred hhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHH
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFA 226 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~ 226 (272)
........ +.+.+.++.+++.+... +++++.+++++++++.+.+.|++.|+.+.++++++++|+.++..+..+++.
T Consensus 245 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 322 (363)
T PF00155_consen 245 RFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAGFFLWVRLDPNDAEELAQ 322 (363)
T ss_dssp HHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBSSEEEEEESHHHHHHHHH
T ss_pred hccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCccEEEEEcccchHHHHHH
Confidence 66655443 78888888888886554 489999999999999999999999999999889999999998546778999
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHH
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISG-FGHRESILEASRRL 268 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l 268 (272)
+|++++||.+.||..|+. ++++|+++ ..+++++++++++|
T Consensus 323 ~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 323 ELLEEYGILVRPGSYFGV--PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp HHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred HHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHHHHHHHhhC
Confidence 999988999999999887 78999999 66999999999986
No 63
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.5e-37 Score=272.90 Aligned_cols=262 Identities=22% Similarity=0.286 Sum_probs=198.0
Q ss_pred cccccccCccc-chHHhcc--cc-eeEEeecCCCCC-----cccCCCC-----CCCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGK--YC-NIEYLECGPGNN-----FFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~--~g-~~~~~~~~~~~~-----~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..|++. |...+.. +| ++++++.+++++ |.+|++. .+++|+++++|||||||.+++.+++++
T Consensus 185 D~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~ 264 (521)
T TIGR03801 185 DKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEK 264 (521)
T ss_pred CEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHH
Confidence 67888877776 7766444 46 888888875433 8887443 268999999999999999999999999
Q ss_pred HHHHHHHc--CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccc-cCC------
Q 036024 70 LVEFARNN--GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF-SSG------ 140 (272)
Q Consensus 70 l~~~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~-~~~------ 140 (272)
|+++|+++ +++||+||+|.++.+. ..++... .++++++++||||.||++|||+||++++++.+. +..
T Consensus 265 I~~ia~~~~~~l~II~DEvY~~f~~~--~~sl~~~--~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~ 340 (521)
T TIGR03801 265 IVDIVANDRPDLMILTDDVYGTFVDD--FRSLFAE--LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEE 340 (521)
T ss_pred HHHHHHhcCCCeEEEECCCchhhccc--ccchhhh--CCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHH
Confidence 99999986 9999999999988752 3444443 457899999999999999999999999876321 000
Q ss_pred ----------------------cchHHHHHhhhhhccCCcchHHHH-----HHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024 141 ----------------------FPVINDFNRIICTCFNGASNIAQA-----GGLACLSSEGLEAVHSVVDYYKENTKILI 193 (272)
Q Consensus 141 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~-----a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 193 (272)
.++.+..+.....+..+.+.+.|. ++.+++. ....+.+++++.++++++.+.
T Consensus 341 ~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~-~~~~y~~~~~~~~~~R~~~l~ 419 (521)
T TIGR03801 341 KKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD-KENAYKAETKDICRRREKLLF 419 (521)
T ss_pred HHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHH
Confidence 011112233334445556777665 3444444 345688999999999999999
Q ss_pred HHHHhCCCeEecCCCceEEEeecCCC-----------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC
Q 036024 194 DTLASLGIKVYGGINAPYVWAHFPGR-----------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG 256 (272)
Q Consensus 194 ~~L~~~g~~~~~~~~~~~~~i~l~~~-----------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~ 256 (272)
+.| ...+...++++++|+|++++.. ++.+++.+|++++||.+.||..|+.. .+++|+|+++
T Consensus 420 ~~L-g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~-~~~vRisla~ 497 (521)
T TIGR03801 420 RGL-GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP-EWSVRVSLAN 497 (521)
T ss_pred Hhc-CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC-CCeEEEEecC
Confidence 988 2233345577899999999731 46789999999999999999999864 6789999975
Q ss_pred -CHHHHHHHHHHHHHhC
Q 036024 257 -HRESILEASRRLEALF 272 (272)
Q Consensus 257 -~~~~i~~~l~~l~~~l 272 (272)
+++++.++.++|++++
T Consensus 498 l~~~~~~~~~~rl~~~~ 514 (521)
T TIGR03801 498 LNEYDYAEIGRAIRKIL 514 (521)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 8888999999998763
No 64
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=8.5e-37 Score=261.75 Aligned_cols=247 Identities=24% Similarity=0.325 Sum_probs=197.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
|.|++..|.+. |...+...| +++.++. ... ++. ++++++++++|+||||.+++.+++++|+++|+++|+++
T Consensus 106 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~----l~~-~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i 178 (357)
T TIGR03539 106 DTVVIPELAYPTYEVGALLAGATPVAADD--PTE----LDP-VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVV 178 (357)
T ss_pred CEEEECCCCcHHHHHHHHhcCCEEeccCC--hhh----cCc-cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEE
Confidence 66777776665 777777788 8777641 111 221 57899999999999999999999999999999999999
Q ss_pred EEcccCCccccCCCCCCcccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024 82 IFDSAYAAYVTDGCPRSIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA 158 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (272)
|+||+|.++.+++.+.+.... ++..+++++++||||.+|++|+|+||+++++++ ++.+.........++
T Consensus 179 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~--------~~~~~~~~~~~~~~~ 250 (357)
T TIGR03539 179 ASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPAL--------VAELLTVRKHAGLMV 250 (357)
T ss_pred EEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHH--------HHHHHHHHhhcccCC
Confidence 999999988776533222211 223468999999999999999999999988877 566666665555668
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP 238 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~ 238 (272)
+.+.|.++.+++.+ ..+.++.++.++++++.+.+.|.+.|+.+..+++++|+|+.++. +..++...| +++||.+.|
T Consensus 251 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~~~~~~~~-~~~~~~~~l-~~~gV~v~p 326 (357)
T TIGR03539 251 PAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLYLWATRGE-DAWDTVDRL-AELGILVAP 326 (357)
T ss_pred CHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEEEEEECCC-CHHHHHHHH-HhCCEEECC
Confidence 88999999888864 45668889999999999999999989888888899999999864 444555554 566999999
Q ss_pred CCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024 239 GSGFGPGGEEYIRISGFGHRESILEASRRLE 269 (272)
Q Consensus 239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~ 269 (272)
|..|+..+.+++|++++.+++++++++++|.
T Consensus 327 g~~f~~~~~~~iRis~~~~~~~i~~~~~~l~ 357 (357)
T TIGR03539 327 GDFYGPAGSQHVRVALTATDERIAAAVARLT 357 (357)
T ss_pred ccccCCCCCCeEEEEecCCHHHHHHHHHhhC
Confidence 9988766678999999888999999998873
No 65
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.6e-37 Score=268.24 Aligned_cols=251 Identities=14% Similarity=0.162 Sum_probs=195.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCC----C----CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLK----G----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~----~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|++. |...++..| +++++|+...+++.+|++ . .++++++++++||||||.+++.+++++|+++
T Consensus 143 d~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~ 222 (423)
T PLN02397 143 STIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDL 222 (423)
T ss_pred CEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 77888888877 888889999 999999843334666644 1 1456777778999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEEE--e-cccccccCCcchHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV--V-PEELLFSSGFPVINDF 147 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~--~-~~~~~~~~~~~~~~~~ 147 (272)
|+++++++|+||+|.++.+++. ..++..+....+++|+++||||+++++|+|+||++ + +++.+. ++...+
T Consensus 223 a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~----~~~~~~ 298 (423)
T PLN02397 223 IKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAV----RVKSQL 298 (423)
T ss_pred HHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHH----HHHHHH
Confidence 9999999999999999988641 22333333334579999999999999999999985 4 333310 112233
Q ss_pred HhhhhhccCCcchHHHHHHHHhccccc----H-HHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCC
Q 036024 148 NRIICTCFNGASNIAQAGGLACLSSEG----L-EAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPG 218 (272)
Q Consensus 148 ~~~~~~~~~~~~~~~~~a~~~~l~~~~----~-~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~ 218 (272)
.........+++.+.|.++..++.+.. + ++++++++.++++++.+.+.|+++| +.+..|++|+|+|++++
T Consensus 299 ~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~- 377 (423)
T PLN02397 299 KLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLN- 377 (423)
T ss_pred HHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCC-
Confidence 333334444577889998988887542 1 3478899999999999999999987 78888899999999985
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
.+++.+|++++||.+.+ .+ |++++ .+++++++++++|++++
T Consensus 378 ---~~~~~~Ll~~~~V~v~~--------~~--Ri~~~~~~~~~i~~~~~~i~~~~ 419 (423)
T PLN02397 378 ---KEQVDRMTKEYHIYMTR--------DG--RISMAGLSSKNVPYLADAIHAVV 419 (423)
T ss_pred ---HHHHHHHHHhCCEEECC--------CC--eEEEeeCCHHHHHHHHHHHHHHH
Confidence 46899999999999962 22 99986 79999999999999864
No 66
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-36 Score=242.95 Aligned_cols=261 Identities=19% Similarity=0.283 Sum_probs=217.8
Q ss_pred cccccC-cccchHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 6 SVIVGQ-AGDLEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
++++-| ||.|...+.-.| ++.++.+-++.+|++|++. .++|.+++++||+||+|.+++.+.+++|++.|++++
T Consensus 153 ILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klg 232 (447)
T KOG0259|consen 153 ILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLG 232 (447)
T ss_pred eecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhC
Confidence 444444 445777777788 9999999999999999776 288999999999999999999999999999999999
Q ss_pred CEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHhhhhhccC
Q 036024 79 SIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 156 (272)
++||.||+|.+++|++.+ .++..+. .--.++.++|.||-|-.||||+||++..+.. +.+..+. ...+..+.....
T Consensus 233 i~vIaDEVY~~~vfg~~pfvpmg~fs-siVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~-~q~~~~~~~~~~- 309 (447)
T KOG0259|consen 233 IMVIADEVYGHTVFGDKPFVPMGKFS-SIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKV-VQGIKNFLDIIP- 309 (447)
T ss_pred CeEEehhhcceeecCCCCccchhhcc-ccCceEeecccccccccCCceeeeEEEecccccccchHH-HHHHHHHHhccC-
Confidence 999999999999999764 3444442 2245799999999998999999999886544 2222221 233444444444
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCCCceEEEeecC------CCChHHHHHHH
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGINAPYVWAHFP------GRKSWDVFAEI 228 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~i~l~------~~~~~~~~~~l 228 (272)
+++++.|.|+-.+|+...+++.....+-++.+.+...+.|+++ ++. ...|++++|+|+.+. -.++.+++..|
T Consensus 310 ~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL 389 (447)
T KOG0259|consen 310 GPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKL 389 (447)
T ss_pred CccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHH
Confidence 4899999999999997777889999999999999999999998 888 467899999999986 24788999999
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
.+|.++.+.||..|+. ++|+|+++..+.+.+++++.||+.+
T Consensus 390 ~~Eesv~~LPG~af~~--~nw~Ri~i~~~~~~leea~~Rik~F 430 (447)
T KOG0259|consen 390 AREESVICLPGQAFGL--KNWLRIVITVEEEMLEEAFSRIKEF 430 (447)
T ss_pred hhhcceEEeccccccC--CCeEEEEEccChHHHHHHHHHHHHH
Confidence 9999999999999987 7999999999999999999999874
No 67
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-37 Score=267.45 Aligned_cols=251 Identities=17% Similarity=0.193 Sum_probs=194.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------C-CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|++. |...++..| +++++|+.+++++.+|++. . ++.+++++++||||||.+++.+++++|+++
T Consensus 125 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~ 204 (404)
T PTZ00376 125 TTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADV 204 (404)
T ss_pred CEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 77888888887 889999999 9999999544356566332 1 345667778999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEE---EecccccccCCcchHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT---VVPEELLFSSGFPVINDF 147 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~---~~~~~~~~~~~~~~~~~~ 147 (272)
|++|+++||+||+|.++.+++. ..++..+....+++++++||||.||++|+|+||+ +.+++... ++.+.+
T Consensus 205 a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~----~l~~~~ 280 (404)
T PTZ00376 205 MKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAA----NVLSQL 280 (404)
T ss_pred HHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHH----HHHHHH
Confidence 9999999999999999888641 2233333334468999999999999999999998 45655410 012233
Q ss_pred HhhhhhccCCcchHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCC
Q 036024 148 NRIICTCFNGASNIAQAGGLACLSSEGL-----EAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPG 218 (272)
Q Consensus 148 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~ 218 (272)
..........++.++|.++..++.+... +++++.+++++++++.+.+.|++.+ +.+..+++|+|+|+.++
T Consensus 281 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~- 359 (404)
T PTZ00376 281 KLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT- 359 (404)
T ss_pred HHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC-
Confidence 3333333444677899999999985431 3467778899999999999999874 45667889999999884
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
.+++.+|++++||.+.|| + |++++ .+++++++++++|++++
T Consensus 360 ---~~~~~~L~~~~~v~v~p~--------~--Ris~~~~~~~~~~~~~~~l~~~~ 401 (404)
T PTZ00376 360 ---KEQVERLIEKYHIYLLDN--------G--RISVAGLTSKNVDYVAEAIHDVV 401 (404)
T ss_pred ---HHHHHHHHHhCCEeecCC--------C--eEEEeccCHHhHHHHHHHHHHHH
Confidence 478889999999999886 1 99996 69999999999998763
No 68
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2.6e-36 Score=259.12 Aligned_cols=247 Identities=17% Similarity=0.264 Sum_probs=191.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcc---cCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFF---PDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~---~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|++. |...++..| +++++|++.++++. .|++. .+++++++++|||||||.+++.+ +|.+++
T Consensus 98 ~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~~~~~~---~l~~l~ 174 (360)
T PRK07392 98 RAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPHNPTGKLWSRE---AILPLL 174 (360)
T ss_pred CeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCCCCCCCCcCHH---HHHHHH
Confidence 56777777666 888999999 99999998776652 33332 35788999999999999999955 555666
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+++++ +|+||+|.++.+++...++.......+++++++||||.||+||+|+||++++++. ++.+.... .
T Consensus 175 ~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~--------~~~~~~~~--~ 243 (360)
T PRK07392 175 EQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDR--------LQRWQQWR--D 243 (360)
T ss_pred HHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHH--------HHHHHhhC--C
Confidence 67775 6679999998876543443332234578999999999999999999999998877 55555433 2
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcC
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTH 233 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~g 233 (272)
..+.+.++|.++.+++++ ..+.+..++.++++++.+.+.|+.+ |+.+.+ .+++|+|++++. +..++...+++++|
T Consensus 244 ~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~-~~~~l~~~ll~~~g 319 (360)
T PRK07392 244 PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG-SALQLQEKLLQQHR 319 (360)
T ss_pred CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC-CHHHHHHHHHhhCC
Confidence 345889999999999974 3455667788999999999999987 787765 679999999875 56677788888889
Q ss_pred eEeeCCCCCCCCCCCeEEEEccCCH--HHHHHHHHHH
Q 036024 234 ITTVPGSGFGPGGEEYIRISGFGHR--ESILEASRRL 268 (272)
Q Consensus 234 i~v~~g~~~~~~~~~~~R~s~~~~~--~~i~~~l~~l 268 (272)
|.+.||..|+..+++++|++++.++ +++.++++++
T Consensus 320 v~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 320 ILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred EEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 9999999997666789999986643 4566666665
No 69
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=3.7e-36 Score=262.96 Aligned_cols=256 Identities=21% Similarity=0.282 Sum_probs=189.4
Q ss_pred ccccc-ccCcc-cchHHhcccc-----eeEEeecCCC-CCcccCCCC---CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVI-VGQAG-DLEDEVGKYC-----NIEYLECGPG-NNFFPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~-~~~~~-~~~~~~~~~g-----~~~~~~~~~~-~~~~~dl~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++ ..|.+ .|...+...+ ....++++.+ .++.+|++. .+++++++++|||||||.+++.+++++|++
T Consensus 127 d~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~ 206 (416)
T PRK09440 127 KKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDA 206 (416)
T ss_pred CeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcccCCCceEEEEecCCCCCCccCCHHHHHHHHH
Confidence 46776 45554 4665433222 2222333322 135566443 357899999999999999999999999999
Q ss_pred HHHHcCCEEEEcccCCccccCCCCCCcccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII 151 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
+|++++++||+||+|..+.... ..... ....+++|+++||||. ++||+|+||+++++++ ++.+....
T Consensus 207 ~a~~~~~~iI~De~Y~~~~~~~---~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l--------~~~~~~~~ 274 (416)
T PRK09440 207 LARQHNIPLLIDNAYGPPFPGI---IFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEI--------IEALSNMN 274 (416)
T ss_pred HHHHcCCcEEEeCCccccCCCc---chhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHHH--------HHHHHHHH
Confidence 9999999999999997543211 11111 1124789999999996 7899999999998887 66777766
Q ss_pred hhccCCcchHHHHHHHHhcccccH-HHHHH-HHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCC--CChHH
Q 036024 152 CTCFNGASNIAQAGGLACLSSEGL-EAVHS-VVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPG--RKSWD 223 (272)
Q Consensus 152 ~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~-~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~--~~~~~ 223 (272)
.....+++.+.|.++.+++.+..+ ++..+ .++.++++++.+++.|.+. ++.+..|++|+|+|+.++. .+..+
T Consensus 275 ~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~ 354 (416)
T PRK09440 275 GIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEE 354 (416)
T ss_pred HHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCCCHHH
Confidence 666666899999999999986554 44444 6788899999888888764 4566788889999999985 35556
Q ss_pred HHHHHHHhcCeEeeCCCCCCCC-------CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 224 VFAEILEKTHITTVPGSGFGPG-------GEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~g~~~~~~-------~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+...+ +++||.+.||+.|++. +.+++|++++.+++++++++++|++++
T Consensus 355 ~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~ 409 (416)
T PRK09440 355 LYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEV 409 (416)
T ss_pred HHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHH
Confidence 66554 6679999999998642 136899999778999999999998763
No 70
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-36 Score=259.22 Aligned_cols=249 Identities=17% Similarity=0.207 Sum_probs=192.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|++. |...++..| +++++|++ +++++.+|++. .+++++++++|||||||.+++.++++++++.|
T Consensus 102 ~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~ 181 (364)
T PRK04781 102 DAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQAL 181 (364)
T ss_pred CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhC
Confidence 46777767666 666667788 99999985 34577666433 36889999999999999999999999999998
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+ ++++||+||+|.+|.+.+ +........+++++++||||+||+||+|+||+++++++ ++.+.+....
T Consensus 182 ~-~~~~iI~Deay~~f~~~~---~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l--------~~~l~~~~~~- 248 (364)
T PRK04781 182 Q-GKALVVVDEAYGEFSDVP---SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAEL--------IAVLRRCQAP- 248 (364)
T ss_pred C-CCcEEEEeCcchhhcCCc---chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHH--------HHHHHhccCC-
Confidence 5 489999999999887533 22222234578999999999999999999999999888 6666665543
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcC
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTH 233 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~g 233 (272)
.+.+.++|.++..++.+....+..+..+.++++++.+.+.|+.+ |+....+++|+|+|+.++ +..++...+ .++|
T Consensus 249 -~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~--~~~~~~~~l-~~~g 324 (364)
T PRK04781 249 -YPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD--DAEAAFQAL-LAAG 324 (364)
T ss_pred -CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--CHHHHHHHH-HHCC
Confidence 34788889988888886555566667778899999999999988 765345678999999997 345555555 5569
Q ss_pred eEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 234 ITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 234 i~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
|.+.+|..|. ...+++|+++. ++++.++++++|+++
T Consensus 325 I~v~~~~~~~-~~~~~~Ris~~-~~~~~~~l~~al~~~ 360 (364)
T PRK04781 325 VVVRDQRAAP-RLSDALRITLG-TPEQNDRVLAALQRT 360 (364)
T ss_pred eEEeeCCCCC-CCCCeEEEeCC-CHHHHHHHHHHHHHH
Confidence 9999998774 33679999985 566777777776653
No 71
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=3.6e-36 Score=279.41 Aligned_cols=259 Identities=15% Similarity=0.164 Sum_probs=200.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCC-CccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPN-NPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~-nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|++. |...++..| +++.+|++++++|.+|++.+ + ..++++++||| ||||.+++.+++++|+++|
T Consensus 779 D~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela 858 (1082)
T PLN02672 779 GTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVC 858 (1082)
T ss_pred CEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHH
Confidence 67888887666 889999999 99999998777899884332 2 34689999997 9999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCCCCC---Ccc----ccCC--CCCceEEEecCccccCCCccceeEEEecccccccCCcchHH
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPR---SIY----EIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN 145 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~---~~~----~~~~--~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~ 145 (272)
++||++||+||+|.++.+++... ++. .... ...++++++||||.+++||+|+||++++++.+ ++
T Consensus 859 ~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eL-------i~ 931 (1082)
T PLN02672 859 AKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVL-------ID 931 (1082)
T ss_pred HHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHH-------HH
Confidence 99999999999999888865321 111 1111 12479999999999999999999999977631 55
Q ss_pred HHHhhhhhccC-CcchHHHHHHHHhcc--ccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC----
Q 036024 146 DFNRIICTCFN-GASNIAQAGGLACLS--SEG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP---- 217 (272)
Q Consensus 146 ~~~~~~~~~~~-~~~~~~~~a~~~~l~--~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~---- 217 (272)
.+......... ..+..++.++.+++. ... .+++++.++.++++++++.+.|++.|+.+..|++|+++|+.++
T Consensus 932 ~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~ 1011 (1082)
T PLN02672 932 AFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLG 1011 (1082)
T ss_pred HHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEcccccc
Confidence 66544322211 122333333333332 122 2577888899999999999999999999999999999999763
Q ss_pred --------------CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 218 --------------GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 218 --------------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+.+..++..+|++++||.+.||+.|+. ++++|++++.+++++++++++|+++
T Consensus 1012 ~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~--~g~~RIsfa~~~e~LeeALerL~kf 1077 (1082)
T PLN02672 1012 KTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI--PGYCRFSFALEDSEFDRALKAIARF 1077 (1082)
T ss_pred ccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC--CCeEEEEecCCHHHHHHHHHHHHHH
Confidence 124677888999989999999988764 6899999988899999999999876
No 72
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-36 Score=254.81 Aligned_cols=245 Identities=24% Similarity=0.349 Sum_probs=199.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----C-CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|++++..|++. |...++..| +++.+|..+ |..|++. . .++++++++|||||||..++.++++++++.+.+
T Consensus 100 d~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~ 176 (356)
T COG0079 100 DTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPE 176 (356)
T ss_pred CEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC
Confidence 67888877777 888888899 999999986 6666443 2 369999999999999999999999999999988
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+.++|+||+|.+|.. .+...+...++|+++++||||+||++|+|+||+++++++ ++.+.+.+...
T Consensus 177 -~~~vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~--------i~~l~~vr~p~-- 241 (356)
T COG0079 177 -GGLVVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPEL--------IAALNKVRPPF-- 241 (356)
T ss_pred -CcEEEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHH--------HHHHHHhcCCC--
Confidence 999999999999875 222222225678999999999999999999999999988 77777666543
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK-VYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT 235 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~ 235 (272)
..+.+++.++.+++.+. +++++.++.+.+.++++.+.|+.+|+. +.+ +.++|++++++......+...|+++ ||.
T Consensus 242 ~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p-S~aNFvlv~~~~~~~~~l~~~L~~~-gii 317 (356)
T COG0079 242 NVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFP-SQANFVLVRVPDAEAAALAEALLKK-GIL 317 (356)
T ss_pred CCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecC-CCCcEEEEECCCccHHHHHHHHHHC-CEE
Confidence 48899999999999865 788999999999999999999999855 555 4699999999852244566666666 999
Q ss_pred eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++.... ....++++|+++. +++|.++++++|++++
T Consensus 318 vR~~~~-~~~~~~~lRitvg-t~een~~ll~AL~~~~ 352 (356)
T COG0079 318 VRDCSS-VGLLPGYLRITVG-TPEENDRLLAALREVL 352 (356)
T ss_pred EEeCCC-CCCCCCeEEEEeC-CHHHHHHHHHHHHHHH
Confidence 999876 4455789999985 5555599998887653
No 73
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=3.5e-36 Score=261.39 Aligned_cols=251 Identities=16% Similarity=0.157 Sum_probs=194.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|++. |...++..| +++++|+...+++.+|++.+ ++.+++++++||||||.+++.+++++|+++
T Consensus 121 d~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~ 200 (396)
T PRK09257 121 AKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAEL 200 (396)
T ss_pred CeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 77888888887 888999999 99999984322455564331 223455557999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCC-C-CCCccccCCCCCceEEEecCccccCCCccceeEEEe--c-ccccccCCcchHHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDG-C-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--P-EELLFSSGFPVINDFN 148 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~-~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~-~~~~~~~~~~~~~~~~ 148 (272)
|++|++++|+||+|.++.++. . ..++..+....+++|+++||||.++++|+|+||+++ + ++.+. ++...+.
T Consensus 201 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~----~~~~~~~ 276 (396)
T PRK09257 201 LKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEAD----RVLSQLK 276 (396)
T ss_pred HHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHH----HHHHHHH
Confidence 999999999999999988652 1 234444443456899999999999988999999984 2 23210 1133443
Q ss_pred hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCC
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGR 219 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~ 219 (272)
.........++.+.|.++.+++.+.. .++++++++.++++++.+.+.|++.+ +.+..+++|+|+|+.++
T Consensus 277 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~-- 354 (396)
T PRK09257 277 ATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT-- 354 (396)
T ss_pred HHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCC--
Confidence 43344455578889999999998542 36788899999999999999999874 66778889999999985
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
.+++.++++++||.+.|. + |++++ .+++++++++++|+++|
T Consensus 355 --~~~~~~l~~~~~V~~~p~--------~--ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 355 --PEQVDRLREEFGVYAVGS--------G--RINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred --HHHHHHHHHcCCEEEcCC--------C--eEEEeeCCHHHHHHHHHHHHhhC
Confidence 356788889999999762 2 99996 58999999999999875
No 74
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=252.83 Aligned_cols=244 Identities=18% Similarity=0.293 Sum_probs=187.8
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
.+++..|.+. +...++..| +++.+|++.+ +.+|++.+ +++++++++|||||||.+++.+ +|.++|+ ++.++
T Consensus 98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l~~~~~~i~l~np~NPTG~~~~~~---~l~~l~~-~~~~i 171 (349)
T PRK07908 98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAVPDDADLVVIGNPTNPTSVLHPAE---QLLALRR-PGRIL 171 (349)
T ss_pred eEEEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHhccCCCEEEEcCCCCCCCCCcCHH---HHHHHHh-cCCEE
Confidence 3445555554 777778889 9999999754 55554433 5789999999999999999965 4555665 58899
Q ss_pred EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024 82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (272)
|+||+|.++..+ ...++... ..+++++++||||.||++|+|+||+++++++ ++.+...... ...+.+
T Consensus 172 IvDe~y~~~~~~-~~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~--------~~~~~~~~~~--~~~~~~ 238 (349)
T PRK07908 172 VVDEAFADAVPG-EPESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALGAPDV--------LARLTRGRAH--WPVGTL 238 (349)
T ss_pred EEECcchhhccC-Cccccccc--cCCCEEEEeecccccCCccceeeeeecCHHH--------HHHHHhcCCC--CCccHH
Confidence 999999987543 34444432 3467899999999999999999999998877 5666554432 336667
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG 241 (272)
Q Consensus 162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~ 241 (272)
.+.++.+++.....+++++.++.++++++.+.+.|+++|+++..+++|+|+|+.+++ . +.+.++++++||.+.||+.
T Consensus 239 ~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~~~~~~--~-~~~~~~l~~~gI~v~~g~~ 315 (349)
T PRK07908 239 QLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVPD--A-ELLRKRLRERGIAVRRGDT 315 (349)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEEEECCc--H-HHHHHHHHhCCEEEEECCC
Confidence 777777777644557888999999999999999999889888888899999999984 3 4455556777999999999
Q ss_pred CCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 242 FGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
|+..+++++|+|+ .+++++++++++|+++
T Consensus 316 f~~~~~~~vRis~-~~~~~~~~l~~al~~~ 344 (349)
T PRK07908 316 FPGLDPDYLRLAV-RPRAEVPVLVQALAEI 344 (349)
T ss_pred CCCCCCCeEEEEe-CCCccHHHHHHHHHHH
Confidence 8654578999998 4667788888887765
No 75
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-36 Score=256.72 Aligned_cols=243 Identities=22% Similarity=0.322 Sum_probs=192.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..|++. |.......| ++++++++.++++.+|++. .+++|+++++|||||||.+++.+++++|+++|++
T Consensus 107 d~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~- 185 (357)
T PRK14809 107 DTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYDGERIVYLTSPHNPTGSEIPLDEVEALAERTDE- 185 (357)
T ss_pred CEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhcCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-
Confidence 66888888766 555566677 9999999766678777443 2468999999999999999999999999999975
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
+++||+||+|.++.+.+. .+... ...+++++++||||.+|+||+|+||+++++++ ++.+.+... ...
T Consensus 186 ~~~iI~De~y~~~~~~~~--~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~--------~~~~~~~~~--~~~ 252 (357)
T PRK14809 186 ETLVVVDEAYGEFAERPS--AVALV-EERDDVAVLRTFSKAYGLAGLRLGYAVVPEEW--------ADAYARVNT--PFA 252 (357)
T ss_pred CcEEEEechhhhccCCch--hHHHH-hhCCCEEEEecchhHhcCcchhheeeecCHHH--------HHHHHHhCC--CCC
Confidence 789999999998876432 22222 23478999999999999999999999999887 556655432 345
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV 237 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~ 237 (272)
.+.++|.++.+++.+ .+++++.++.++++++.+.+.|...++ +.+|+|+|+.++ +..++...+ +++||.+.
T Consensus 253 ~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g~f~~~~~~--~~~~~~~~l-~~~gv~v~ 323 (357)
T PRK14809 253 ASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAPTW----ESAGNFVLAEVG--DASAVAEAA-QERGVIVR 323 (357)
T ss_pred CCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCccC----CCCCCEEEEECC--CHHHHHHHH-HHCCEEEE
Confidence 788888888888864 567888899999999999999876432 458899999986 455666665 56699999
Q ss_pred CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
||+.|+. ++++|+++. +++++++++++|++++
T Consensus 324 ~g~~f~~--~~~iRls~~-~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 324 DCTSFGL--PECIRITCG-TREETERAVEVLNEVL 355 (357)
T ss_pred ECccCCC--CCeEEEecC-CHHHHHHHHHHHHHHh
Confidence 9999864 579999975 5789999999998864
No 76
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.6e-35 Score=252.43 Aligned_cols=248 Identities=18% Similarity=0.266 Sum_probs=192.2
Q ss_pred cccc-cCcccchHHhcccc-eeEEeecCCCCCcccCC---CC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 6 SVIV-GQAGDLEDEVGKYC-NIEYLECGPGNNFFPDL---KG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 6 ~~~~-~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl---~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
+++. +.|+.|...++..| +++++|++++++|.+|. +. .+++|+++++|||||||.+++.+++++|+++|+++++
T Consensus 97 viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~ 176 (356)
T PRK08056 97 AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNI 176 (356)
T ss_pred EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCC
Confidence 3444 44445788888999 99999998777888762 11 2789999999999999999999999999999999999
Q ss_pred EEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024 80 IIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA 158 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (272)
++|+||+|.++.+++. ..+. +. ..+++++++||||.+|++|+|+||++++++.+ ++.+.... ...+.
T Consensus 177 ~ii~De~y~~~~~~~~~~~~~--~~-~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~-------~~~l~~~~--~~~~~ 244 (356)
T PRK08056 177 ALILDEAFIDFIPDETGFIPQ--LA-DNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAA-------VARMRRQQ--MPWSI 244 (356)
T ss_pred EEEEecchhccCCcchHHHHH--hc-cCCCEEEEEechhhccCcchhheeeecCCHHH-------HHHHHHhC--CCCch
Confidence 9999999998876542 1122 22 23578999999999999999999999864331 44554432 23447
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV 237 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~ 237 (272)
+.++|.++..++.. ..+.++.++.++++++.+.+.|+.+ ++.+.++ +++|+|+.++. +..++...|++ +||.+.
T Consensus 245 ~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~l~~-~gI~v~ 319 (356)
T PRK08056 245 NAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER-PDIDLQRALLT-QRILIR 319 (356)
T ss_pred hHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC-ChHHHHHHHHH-CCeEEE
Confidence 77888888888853 3556888899999999999999987 7777665 78999999974 34567777765 599999
Q ss_pred CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+|..|...+.+++|+++. ++++.+.+++.|+++
T Consensus 320 ~~~~f~~~~~~~iRis~~-~~~~~~~l~~~l~~~ 352 (356)
T PRK08056 320 SCANYPGLDSRYYRVAIR-SAAENERLLAALRNV 352 (356)
T ss_pred ECCCCCCCCCCEEEEEEc-CHHHHHHHHHHHHHH
Confidence 999986555679999985 567777777777664
No 77
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-36 Score=256.27 Aligned_cols=249 Identities=20% Similarity=0.276 Sum_probs=196.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..|++. |...+...| +++.+|++ +.+..++ +++ .++++++++++||||||.+++.+++.++++.|+ ++
T Consensus 106 d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~-~~ 183 (359)
T PRK03158 106 TNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVP-SH 183 (359)
T ss_pred CEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CC
Confidence 66777777666 777778888 99999997 3343333 222 267899999999999999999998888888774 69
Q ss_pred CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA 158 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (272)
+++|+||+|.++.+++...+........+++++++||||.+|++|+|+||+++++++ ++.+..... ....
T Consensus 184 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~--------~~~~~~~~~--~~~~ 253 (359)
T PRK03158 184 VLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEEL--------IEKLNIARP--PFNT 253 (359)
T ss_pred cEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHH--------HHHHHHhcC--CCCC
Confidence 999999999988776533332222233468999999999999999999999999887 566655443 2458
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP 238 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~ 238 (272)
+.++|.++.+++.+ ..+.++.++.++++++.+.+.|.+.|+.+.++ +|+|+|+.++. +..++...+++ +||.+.|
T Consensus 254 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~i~~~~~~-~~~~~~~~l~~-~gv~v~~ 328 (359)
T PRK03158 254 TRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYYPS-QTNFIFVDTGR-DANELFEALLK-KGYIVRS 328 (359)
T ss_pred CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCC-cCcEEEEECCC-CHHHHHHHHHH-CCeEEee
Confidence 99999999999974 35667888889999999999999888887664 68899999853 56677777765 5999999
Q ss_pred CCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 239 GSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|+.|+. ++++|++++ +++++++++++|++++
T Consensus 329 g~~f~~--~~~iRi~~~-~~~~~~~l~~al~~~~ 359 (359)
T PRK03158 329 GAALGF--PTGVRITIG-LKEQNDKIIELLKELL 359 (359)
T ss_pred CCCCCC--CCeEEEecC-CHHHHHHHHHHHHHhC
Confidence 999863 579999985 7889999999998864
No 78
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-35 Score=253.65 Aligned_cols=254 Identities=26% Similarity=0.346 Sum_probs=198.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|++. |...++..| ++++++++++ ++.+|+++ .++++++++++||||||.+++.+++++|+++|++
T Consensus 121 d~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~ 199 (394)
T PRK06836 121 DEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEE 199 (394)
T ss_pred CEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 56777777766 878888899 9999999865 45566443 2679999999999999999999999999999999
Q ss_pred ------cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024 77 ------NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 77 ------~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
||+++|+||+|.++.+++.. .++.. ..+++++++|+||.+|+||+|+||++++++..+ ...+...+..
T Consensus 200 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~---~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~--~~~~~~~~~~ 274 (394)
T PRK06836 200 KSKEYGRPIYLISDEPYREIVYDGAEVPYIFK---YYDNSIVVYSFSKSLSLPGERIGYIAVNPEMED--ADDLVAALVF 274 (394)
T ss_pred hhhccCCCeEEEEeccccccccCCCCCCChHH---ccCcEEEEecchhhccCcceeeEEEecCHHHhh--hHHHHHHHHH
Confidence 89999999999998876532 22222 246789999999999999999999999876521 1111222221
Q ss_pred hhhh-ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHH
Q 036024 150 IICT-CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEI 228 (272)
Q Consensus 150 ~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~l 228 (272)
.... ....++.+.|.++..++.+.. .++.++++++.+.+.|++.|+.+..+++|+|+|+.++..+..+++..
T Consensus 275 ~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~- 347 (394)
T PRK06836 275 ANRILGFVNAPALMQRVVAKCLDATV------DVSIYKRNRDLLYDGLTELGFECVKPQGAFYLFPKSPEEDDVAFCEK- 347 (394)
T ss_pred HhhccccccCCHHHHHHHHHHhCChH------HHHHHHHHHHHHHHHHHhCCCEeecCCceEEEEEeCCCCCHHHHHHH-
Confidence 1111 123477788998888887521 35678889999999999999998888889999999986556666644
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++++||.+.||..|+. .+++|++++.+++++++++++|++++
T Consensus 348 l~~~gv~v~~g~~f~~--~~~iRi~~~~~~~~~~~~i~~l~~~l 389 (394)
T PRK06836 348 AKKHNLLLVPGSGFGC--PGYFRLSYCVDTETIERSLPAFEKLA 389 (394)
T ss_pred HHhCCEEEECchhcCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 5666999999998864 57999999888999999999998864
No 79
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7e-36 Score=255.35 Aligned_cols=245 Identities=22% Similarity=0.305 Sum_probs=191.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..|.+. |...++..| +++.+|++++ +.+|++. .+++++++++|||||||.+++.+++++|++.|++
T Consensus 100 ~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~--~~~d~~~l~~~~~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~- 176 (351)
T PRK01688 100 DAILYCPPTYGMYSVSAETIGVEIRTVPTLDN--WQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG- 176 (351)
T ss_pred CEEEEcCCCHHHHHHHHHHcCCEEEEeecCCC--CCCCHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-
Confidence 56777766655 888888899 9999999653 5566433 3688999999999999999999999999999976
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
++++|+||+|.+|.... +...+....+++++++||||+||++|+|+||++++++. ++.+.+.... +.
T Consensus 177 ~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~--------i~~l~~~~~~--~~ 243 (351)
T PRK01688 177 KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEV--------INLLLKVIAP--YP 243 (351)
T ss_pred CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHH--------HHHHHhccCC--CC
Confidence 68999999999886332 22232223468999999999999999999999998888 5566654432 34
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v 236 (272)
.+.+++.++.+++.+...+++++.++.++++++++.+.|+.+ ++....+++++|+|+.++ +..++...|+++ ||.+
T Consensus 244 v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~--~~~~l~~~L~~~-gi~v 320 (351)
T PRK01688 244 LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT--ASSAVFKSLWDQ-GIIL 320 (351)
T ss_pred CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--CHHHHHHHHHHC-CeEE
Confidence 677788888888875545677888899999999999999988 665445568999999986 456777777655 9999
Q ss_pred eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024 237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269 (272)
Q Consensus 237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~ 269 (272)
+++..+. +..+++|+|+. +++++++++++|+
T Consensus 321 r~~~~~~-~~~~~iRis~~-~~~e~~~l~~al~ 351 (351)
T PRK01688 321 RDQNKQP-GLSNCLRITIG-TREECQRVIDALR 351 (351)
T ss_pred EECCCcC-CCCCeEEEeCC-CHHHHHHHHHhhC
Confidence 9876552 23679999985 6789999988874
No 80
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=240.07 Aligned_cols=259 Identities=20% Similarity=0.287 Sum_probs=212.4
Q ss_pred ccccccCccc-chHHh-cccc-eeEEeecCCCCCcccCCCC-----------CCCceEEEEecCCCccccCCCHHHHHHH
Q 036024 5 SSVIVGQAGD-LEDEV-GKYC-NIEYLECGPGNNFFPDLKG-----------TSRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~-~~~g-~~~~~~~~~~~~~~~dl~~-----------~~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
+.+++-|+++ +...+ .+-| +++|+.+...+++.++.++ ..+.|.++++||+||.|.+++++++..+
T Consensus 172 afLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~l 251 (471)
T KOG0256|consen 172 AFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISL 251 (471)
T ss_pred eeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHH
Confidence 3444445444 55443 4566 9999999999999988544 2678999999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCC-CCCccccCC----CCCceEEEecCccccCCCccceeEEEecccccccCCcchHH
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG----AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN 145 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~ 145 (272)
+.+|.++++.+|+||+|..-+++.. ..++.++.. .++++.++-|+||.+|+||+|+|.+...++.+ .
T Consensus 252 l~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~V-------v- 323 (471)
T KOG0256|consen 252 LNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDV-------V- 323 (471)
T ss_pred HHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHH-------H-
Confidence 9999999999999999998888754 345544421 45789999999999999999999999988883 2
Q ss_pred HHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-----
Q 036024 146 DFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG----- 218 (272)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~----- 218 (272)
....-++... ..++..|..+..+|.+..+ .++++.+++++.+.+++.++|+++|+.+...++|.|+|+++..
T Consensus 324 saA~kmssf~-~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~ 402 (471)
T KOG0256|consen 324 SAATKMSSFG-LVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSL 402 (471)
T ss_pred HHHHHHhhcc-CCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcC
Confidence 3332233333 3888999999999997555 7899999999999999999999999999999999999999852
Q ss_pred --CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHH-HHHHHHHhC
Q 036024 219 --RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILE-ASRRLEALF 272 (272)
Q Consensus 219 --~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~-~l~~l~~~l 272 (272)
....+++.+++++.++.+.||++|.-..+||+|++|++..++..+ +++||++++
T Consensus 403 tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~ 459 (471)
T KOG0256|consen 403 TFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFL 459 (471)
T ss_pred ChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHH
Confidence 234568888999989999999999877799999999887777666 999998764
No 81
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=255.15 Aligned_cols=255 Identities=18% Similarity=0.202 Sum_probs=191.1
Q ss_pred cccccccCccc-chHHhc-ccc-eeEEeecC-CCCCcccC-CCC-----CCCce-EEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECG-PGNNFFPD-LKG-----TSRTD-IIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~-~~~~~~~d-l~~-----~~~~~-~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..|++. |...+. ..| +++++|+. +++++.+| +++ .++.+ +++++|||||||.+++.+++++|++
T Consensus 94 d~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~ 173 (388)
T PRK08637 94 DTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVE 173 (388)
T ss_pred CEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 67888888777 666544 578 99999984 44455544 322 12344 5666699999999999999999999
Q ss_pred HHHH-----cCCEEEEcccCCccccCCCC-CCc-cccCCCCCce--EEEecCccccCCCccceeEEEecc------cccc
Q 036024 73 FARN-----NGSIIIFDSAYAAYVTDGCP-RSI-YEIPGAREVA--IEISSFSKFSGFTGVRLGWTVVPE------ELLF 137 (272)
Q Consensus 73 ~~~~-----~~~~vi~D~~~~~~~~~~~~-~~~-~~~~~~~~~~--i~~~s~sK~~g~~g~r~G~~~~~~------~~~~ 137 (272)
+|++ ++++||+||+|.++.+++.. .++ ..+.+..+++ ++++|+||.+++||+|+||++++. ++
T Consensus 174 ~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l-- 251 (388)
T PRK08637 174 AIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTV-- 251 (388)
T ss_pred HHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHH--
Confidence 9875 89999999999999887643 232 2222334564 556799999999999999999753 33
Q ss_pred cCCcchHHHHHhh----hhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCC
Q 036024 138 SSGFPVINDFNRI----ICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL----GIKVYGGIN 208 (272)
Q Consensus 138 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~ 208 (272)
.+.+... ........+.++|.++..++.+..+ .+.++.++.++++.+.+.+.|+.. ++.+..+++
T Consensus 252 ------~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~ 325 (388)
T PRK08637 252 ------KEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNS 325 (388)
T ss_pred ------HHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccc
Confidence 3444321 1223345888999999999986544 567777888999999999999765 577888889
Q ss_pred ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 209 APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 209 ~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
|+|+|+.+++.++.+++..+++++||.+.+. +++++|++++. +++++++++++|++++
T Consensus 326 g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~~~~~i~~~~~~l~~~~ 384 (388)
T PRK08637 326 GYFMCLKLKGVDAEELRVHLLEKYGIGTIAL------NETDLRIAFSCVEEEDIPELFDSIYKAI 384 (388)
T ss_pred eEEEEecCChHHHHHHHHHHhhhcceEEEec------cCCceEEEeecCCHHHHHHHHHHHHHHH
Confidence 9999999985456778888877789988742 25789999865 7889999999998764
No 82
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-35 Score=255.06 Aligned_cols=242 Identities=22% Similarity=0.313 Sum_probs=190.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..|++. |...+...| +++.+|++.. ++.+| +++ .+++++++++|||||||.+++.+++++|+++|++++
T Consensus 106 d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~-~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~ 184 (366)
T PRK01533 106 DNIVTAGATFPQYRHHAIIEGCEVKEVALNNG-VYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT 184 (366)
T ss_pred CEEEEcCCcHHHHHHHHHHcCCEEEEeecCCC-CcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC
Confidence 66788877666 888888899 9999999632 43333 322 267899999999999999999999999999998765
Q ss_pred CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA 158 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (272)
++|+||+|.++.+.+...+........+++|+++||||.||+||+|+||+++++++ ++.+..... ....
T Consensus 185 -~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~--------~~~l~~~~~--~~~~ 253 (366)
T PRK01533 185 -LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEEL--------IEKLNVVRL--PFNV 253 (366)
T ss_pred -EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHH--------HHHHHHhcC--CCCc
Confidence 67789999987765422222222223578999999999999999999999998877 666665543 3568
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP 238 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~ 238 (272)
+.++|.++.+++.+ ..+.++.++..+++++.+.+.++.+|+++.++ +++|+|+.++ +..++...|++ +||.|++
T Consensus 254 ~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~-~~nf~~~~~~--~~~~~~~~l~~-~GI~Vr~ 327 (366)
T PRK01533 254 SSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKENEIPFYQS-QTNFIFLPVE--NGGEIYEACAH-AGFIIRP 327 (366)
T ss_pred CHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-cCcEEEEeCC--CHHHHHHHHHH-CCcEEcc
Confidence 99999999999974 45667888888999999999999889888876 7889999986 44566666665 5999997
Q ss_pred CCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 239 GSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
| ++++|+++ .+.++.++++++|+++
T Consensus 328 ---~----~~~iRis~-~~~~~~~~l~~al~~~ 352 (366)
T PRK01533 328 ---F----PNGVRITV-GTREQNEGVISVLQQH 352 (366)
T ss_pred ---C----CCceEEeC-CCHHHHHHHHHHHHHH
Confidence 3 36899997 5778889999888765
No 83
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.2e-34 Score=244.72 Aligned_cols=233 Identities=18% Similarity=0.214 Sum_probs=184.2
Q ss_pred cccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+++..|++. |...++..| ++++++++.+ .+. ..+++++++|||||||.+++.+++++|++.|++++.++|+
T Consensus 96 v~v~~P~y~~y~~~~~~~g~~~~~v~~~~~-----~~~--~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~ 168 (339)
T PRK06959 96 VGIAPLAYSEYAPAFARHGHRVVPLDEAAD-----TLP--AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIV 168 (339)
T ss_pred EEEcCCCcHHHHHHHHHCCCEEEeecccch-----hcc--ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 556555555 888889999 9999887641 111 3567999999999999999999999999999999999999
Q ss_pred cccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH
Q 036024 84 DSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ 163 (272)
Q Consensus 84 D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (272)
||+|.++... .++..+. ..+++++++||||.||+||+|+||+++++++ ++.+.+... ....+.++|
T Consensus 169 DEay~~~~~~---~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~l--------i~~l~~~~~--~~~vs~~~q 234 (339)
T PRK06959 169 DEAFADTLPA---ASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAAPAL--------LAALRDALG--AWTVSGPAR 234 (339)
T ss_pred ECCCccCCCc---ccchhcc-CCCCEEEEecChhhcCCcchheEEEecCHHH--------HHHHHHhcC--CCCCcHHHH
Confidence 9999987643 2333333 2467899999999999999999999999887 667766544 234788999
Q ss_pred HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCC
Q 036024 164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG 243 (272)
Q Consensus 164 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~ 243 (272)
.++.+++.+ ..+.++.++.++++++.+.+.|+++|+++.. .++|+|+.++ +..++...|.++ ||.++. |+
T Consensus 235 ~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~f~~~~~~--~~~~l~~~l~~~-GI~vr~---~~ 304 (339)
T PRK06959 235 HAVRAAFAD--AAWQAAMRERLAADGARLAALLRAHGFAVHA--TPLFSWTDDP--RAAALHAALARR-GIWTRY---FA 304 (339)
T ss_pred HHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCCccC--cceEEEEeCC--CHHHHHHHHHhC-CeEEEE---CC
Confidence 999999975 3456788999999999999999999887762 5789999886 455666666655 999974 32
Q ss_pred CCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 244 PGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 244 ~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
. .+++|+++..++++.+++++.|+++
T Consensus 305 ~--~~~lRisi~~~~~e~~~l~~al~~~ 330 (339)
T PRK06959 305 P--PPSVRFGLPADEAEWQRLEDALAEC 330 (339)
T ss_pred C--CCeEEEECCCCHHHHHHHHHHHHHH
Confidence 2 4699999977778888888887764
No 84
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=2.6e-34 Score=243.65 Aligned_cols=237 Identities=17% Similarity=0.183 Sum_probs=182.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
|.|++..|++. |...++..| +++.+|++.. . ....++++++++|||||||.+++.+++++|+++|++++++|
T Consensus 87 d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~---~---~~~~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~i 160 (330)
T PRK05664 87 GRVGVLSPCYAEHAHAWRRAGHQVRELDEAEV---E---AALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWL 160 (330)
T ss_pred CEEEEcCCChHHHHHHHHHcCCeEEEechhhH---h---hhhcCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEE
Confidence 67788888777 888889999 9999987521 1 11246789999999999999999999999999999999999
Q ss_pred EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024 82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (272)
|+||+|.++.. ..++..+. ..+++++++||||+||+||+|+||+++++++ ++.+..... ..+.+.+
T Consensus 161 I~DE~y~~~~~---~~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l--------~~~~~~~~~--~~~~~~~ 226 (330)
T PRK05664 161 VVDEAFMDNTP---QHSLAACA-HRPGLIVLRSFGKFFGLAGARLGFVLAEPAL--------LRALAELLG--PWTVSGP 226 (330)
T ss_pred EEECCcccCCC---cccccccc-cCCCEEEEeeccccccCCCcceEEEEeCHHH--------HHHHHHhcC--CCCCCHH
Confidence 99999987642 13444554 3468999999999999999999999999887 566665533 2346788
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG 241 (272)
Q Consensus 162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~ 241 (272)
.|.++.+++.+. .+.++.++.++++++.+.+.|++.|+...+ ..++|+|+.++ +..++...+ +++||.+.+
T Consensus 227 ~~~~~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~f~~~~~~--~~~~~~~~l-~~~gi~v~~--- 297 (330)
T PRK05664 227 TRWLAQAALADT--PWQRRQRERLLAASQRLAALLRRHGLTPAG-GCALFQWVRTE--DAAALHEFL-ARRGILTRL--- 297 (330)
T ss_pred HHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CcceEEEEecC--CHHHHHHHH-HHCCeEEEE---
Confidence 889888888743 445778899999999999999998875332 23478888875 455666555 555999974
Q ss_pred CCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 242 FGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
|+ ..+++|+++..++++++++++.|+++
T Consensus 298 f~--~~~~iRis~~~~~~~~~~l~~al~~~ 325 (330)
T PRK05664 298 FE--QPASLRFGLPADEADWARLDQALLAY 325 (330)
T ss_pred CC--CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence 43 25799999976677777777776653
No 85
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-34 Score=250.25 Aligned_cols=239 Identities=18% Similarity=0.233 Sum_probs=183.3
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC---------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT---------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~---------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
.|++..|++. |...++..| +++.++++++ ++.+|++.+ +++|+++++|||||||.+++.+++++++++
T Consensus 118 ~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~ 196 (374)
T PRK02610 118 SILVAEPTFSMYGILAQTLGIPVVRVGRDPE-TFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSL 196 (374)
T ss_pred eEEEcCCChHHHHHHHHHcCCEEEEecCCcc-cCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhc
Confidence 5777777776 888889999 9999998754 566774442 578999999999999999999999999988
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
| ++++||+||+|.++.+.. .+..+. ..+++|+++||||++|+||+|+||+++++++ ++.+.....
T Consensus 197 ~--~~~~iI~De~Y~~~~~~~---~~~~~~-~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l--------~~~l~~~~~- 261 (374)
T PRK02610 197 P--EDILVVIDEAYFEFSQTT---LVGELA-QHPNWVILRTFSKAFRLAAHRVGYAIGHPEL--------IAVLEKVRL- 261 (374)
T ss_pred c--CCcEEEEeccccccCccc---hHHHHh-cCCCEEEEEecchhccCcccceeeeecCHHH--------HHHHHHhcC-
Confidence 6 499999999999875321 222232 2357889999999999999999999998877 566655542
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC-CChHHHHHHHHHh
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEK 231 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~ 231 (272)
..+.+.+.|.++..++.. ...+.+.+++.+++ ++.+.+.|+.+ ++.+. +++|+|+|+.++. .+..++...+ ++
T Consensus 262 -~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~~~~~~~~~~l-~~ 336 (374)
T PRK02610 262 -PYNLPSFSQLAAQLALEH-RQELLAAIPEILQE-RDRLYQALQELPQLRVW-PSAANFLYLRLSQDAALAALHQAL-KA 336 (374)
T ss_pred -CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHH-HHHHHHHHHhCCCcEeC-CCcceEEEEeCCCCCCHHHHHHHH-HH
Confidence 234788999988888873 34555655555554 67788888877 77654 5789999999985 3556666665 56
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.++ .+++|+++.. .+++++++++|++++
T Consensus 337 ~gi~v~~~-------~~~lRls~~~-~~~~~~~l~~l~~~l 369 (374)
T PRK02610 337 QGTLVRHT-------GGGLRITIGT-PEENQRTLERLQAAL 369 (374)
T ss_pred CCEEEEeC-------CCeEEEeCCC-HHHHHHHHHHHHHHH
Confidence 69999753 4689999864 567899999998764
No 86
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-35 Score=248.84 Aligned_cols=246 Identities=24% Similarity=0.303 Sum_probs=189.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 80 (272)
|.|++..|++. |...++..| +++.+|++.+..+.++ ++..+++|+++++|||||||.+++.+++++|++.|+ +++
T Consensus 103 d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~--~~~ 180 (354)
T PRK04635 103 DSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQLDGAKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAI 180 (354)
T ss_pred CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHhccCCCEEEEeCCCCCCCccCCHHHHHHHHHhCC--CcE
Confidence 66777777766 777788889 9999999754333333 333478999999999999999999999999998875 499
Q ss_pred EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcch
Q 036024 81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160 (272)
Q Consensus 81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (272)
+|+||+|.++.... +...+....+++++++||||.+|++|+|+||+++++++ ++.+..... ..+.+.
T Consensus 181 vivDeay~~~~~~~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~--------~~~l~~~~~--~~~~~~ 247 (354)
T PRK04635 181 VVVDEAYIEFCPEY---SVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEEL--------IEILMRVIA--PYPVPL 247 (354)
T ss_pred EEEeCchHhhccCc---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHH--------HHHHHhhcC--CCCCCH
Confidence 99999999876332 33333234467899999999999999999999999887 555554332 334677
Q ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG 239 (272)
Q Consensus 161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g 239 (272)
+.|.++.+++.+.+.+++++.++.++++++.+.+.|++++ +++.++ +|.|+|+.++ +..++. ++++++||.+.++
T Consensus 248 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~--~~~~~~-~~l~~~gv~v~~~ 323 (354)
T PRK04635 248 PVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG-NGNYVLAKFD--DVDAVF-KALWDAGIVARAY 323 (354)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-CCcEEEEECC--CHHHHH-HHHHHCCEEEEEC
Confidence 8888888888766566678888899999999999999985 777766 5789999987 344554 4556779999865
Q ss_pred CCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 240 SGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 240 ~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
..+ ...+++|+|+ .+.+++++++++|++.
T Consensus 324 ~~~--~~~~~lRis~-~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 324 KDP--RLANCIRFSF-SNRAETDKLIGLIRNQ 352 (354)
T ss_pred CCC--CCCCeEEEEe-CCHHHHHHHHHHHHHh
Confidence 432 2367999997 5789999999999764
No 87
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-34 Score=248.57 Aligned_cols=248 Identities=23% Similarity=0.281 Sum_probs=186.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..|.+. +...++..| ++++++++.+.++.++ +++ .+++++++++|||||||.+++.+++++|+++|++ +
T Consensus 113 d~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~-~ 191 (371)
T PRK05166 113 DRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPP-E 191 (371)
T ss_pred CEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-C
Confidence 66777766665 777778889 9999999765444443 322 2578999999999999999999999999999864 8
Q ss_pred CEEEEcccCCccccCCCCCCcccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
+++|+||+|.++.+++...+.... ....+++|+++||||.||++|+|+||++++++.+ .+.+..... ..+
T Consensus 192 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l-------~~~~~~~~~--~~~ 262 (371)
T PRK05166 192 TLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPEL-------VGLLDRVRT--PFN 262 (371)
T ss_pred cEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHH-------HHHHHHhcc--CCC
Confidence 999999999998865433343332 2234679999999999999999999988754432 555554332 344
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV 237 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~ 237 (272)
.+.++|.++.+++.+ ..++++.++.++++++.+.+.|++.|+.+.+ .+|+|+|++++. +..++...++++ ||.+.
T Consensus 263 ~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p-~~g~fl~~~~~~-~~~~l~~~l~~~-gi~v~ 337 (371)
T PRK05166 263 VNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAP-SRANFLFFDARR-PASAVAEALLRQ-GVIVK 337 (371)
T ss_pred CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCC-CcCCEEEEeCCC-CHHHHHHHHHHC-CeEEe
Confidence 788889888888864 3577888899999999999999998987654 578999999864 456777777765 99999
Q ss_pred CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024 238 PGSGFGPGGEEYIRISGFGHRESILEASRRLE 269 (272)
Q Consensus 238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~ 269 (272)
||..++ ..+++|++++. .++.+++.+.|+
T Consensus 338 p~~~~~--~~~~iRi~~~~-~~~~~~l~~~l~ 366 (371)
T PRK05166 338 PWKQPG--FETFIRVSIGS-PEENDHFVAALD 366 (371)
T ss_pred cCCCCC--CCCeEEEEcCC-HHHHHHHHHHHH
Confidence 987543 37899999864 334444444443
No 88
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.6e-34 Score=247.00 Aligned_cols=242 Identities=20% Similarity=0.263 Sum_probs=189.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..|++. |...++..| +++.+|++.+ +.+|++. .+++++++++|||||||.+++.++++++++.|+ +
T Consensus 120 d~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~-~ 196 (370)
T PRK09105 120 AGLVTADPTYEAGWRAADAQGAPVAKVPLRAD--GAHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLLANKP-A 196 (370)
T ss_pred CEEEEeCCChHHHHHHHHHcCCeEEEecCCCC--CCCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCC-C
Confidence 67888887777 778888899 9999998754 4445332 367899999999999999999999999998764 5
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
++++|+||+|.++... .+...+....+++++++||||.||++|+|+||+++++++ ++.+... ....
T Consensus 197 ~~~lIvDEaY~~f~~~---~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~--------i~~l~~~---~~~~ 262 (370)
T PRK09105 197 GSVLLVDEAYIHFSDA---PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDL--------LAKLARF---GHNP 262 (370)
T ss_pred CcEEEEECchHHhccC---cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHH--------HHHHHhc---CCCC
Confidence 9999999999876532 233444334578999999999999999999999998877 5555544 2334
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV 237 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~ 237 (272)
.+.+.|.++.+++.+ .+++++.++.++++++.+.+.|+++|+.+.++++ .|+++.++ .+..++...|+++ ||.+
T Consensus 263 ~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~-~f~~~~~~-~~~~~l~~~L~~~-gI~v- 336 (370)
T PRK09105 263 LPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPSQA-NCFMVDVK-RPAKAVADAMAKQ-GVFI- 336 (370)
T ss_pred cCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCC-cEEEEeCC-CCHHHHHHHHHHC-CcEE-
Confidence 788888888888874 4678889999999999999999999988887654 45567776 3566788888776 9998
Q ss_pred CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+..|. ..++++|+++. ++++++++++.|+++
T Consensus 337 -~~~~~-~~~~~~Ris~~-~~~~~~~l~~al~~~ 367 (370)
T PRK09105 337 -GRSWP-IWPNWVRVTVG-SEEEMAAFRSAFAKV 367 (370)
T ss_pred -ecCCC-CCCCeEEEEcC-CHHHHHHHHHHHHHH
Confidence 34453 34689999986 577888888888765
No 89
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-34 Score=247.05 Aligned_cols=243 Identities=20% Similarity=0.268 Sum_probs=188.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|.+. |...++..| +++.+|.+. ++.+|++. .++++++++++||||||.+++.+++++|++.+
T Consensus 128 d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~- 204 (380)
T PLN03026 128 DKIIDCPPTFGMYVFDAAVNGAEVIKVPRTP--DFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP- 204 (380)
T ss_pred CEEEEcCCChHHHHHHHHHcCCEEEEeecCC--CCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-
Confidence 66788777776 777777888 999999864 34455332 36889999999999999999988888887653
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++|+||+|.++.+.+.. .... ...+++++++||||.||++|+|+||+++++++ ++.+.+....
T Consensus 205 ---~~vi~DeaY~~~~~~~~~--~~~~-~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~--------i~~l~~~~~~-- 268 (380)
T PLN03026 205 ---ILVVLDEAYIEFSTQESR--MKWV-KKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSI--------IEYLWRAKQP-- 268 (380)
T ss_pred ---CEEEEECcchhhcCCcch--HHHH-HhCCCEEEEecchHhhcCccccceeeecCHHH--------HHHHHHhcCC--
Confidence 899999999988764322 1212 23578999999999999999999999999887 5666554432
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi 234 (272)
...+.++|.++.+++.+ .+++++.++.++++++.+.+.|++++.....+++++|+|+.++ +.+..++...|+ ++||
T Consensus 269 ~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~l~-~~gI 345 (380)
T PLN03026 269 YNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSGRDAKKLKEDLA-KMGV 345 (380)
T ss_pred CCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCCCCHHHHHHHHH-HCCe
Confidence 34788999999999874 3677889999999999999999998533335568999999997 445667777777 5599
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
.+.++..+ ...+++|+|++ ++++++++++.|+++
T Consensus 346 ~v~~~~~~--~~~~~lRis~~-~~~~~~~l~~al~~~ 379 (380)
T PLN03026 346 MVRHYNSK--ELKGYIRVSVG-KPEHTDALMEALKQL 379 (380)
T ss_pred EEEECCCC--CCCCEEEEecC-CHHHHHHHHHHHHHh
Confidence 99998653 34679999986 566777888777654
No 90
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-33 Score=244.69 Aligned_cols=254 Identities=21% Similarity=0.283 Sum_probs=195.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|.+. +...+...| ++++++++ .++++.+|++. .++++++++++||||||.+++.+++++|+++|+
T Consensus 108 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~ 187 (380)
T PRK06225 108 DNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIAR 187 (380)
T ss_pred CEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHH
Confidence 56777777665 556677888 99999985 33456666443 257899999999999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
++|+++|+||+|.++..+. .+.... .+++++++.||||.+|++|+|+||+++++++ ++.+..... ..
T Consensus 188 ~~~~~ii~De~y~~~~~~~--~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l--------~~~~~~~~~-~~ 254 (380)
T PRK06225 188 DNDAFLLHDCTYRDFAREH--TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVATPDL--------IEVVKSIVI-ND 254 (380)
T ss_pred HCCcEEEEehhHHHHhccC--Cchhhc--CCCCEEEEeechhhcCCccceeEEEecCHHH--------HHHHHHHHh-cc
Confidence 9999999999998775432 222222 3467899999999999999999999998877 555554432 34
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE-ecCCCceEEEeecC--CCChHHHHHHHHHh
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKV-YGGINAPYVWAHFP--GRKSWDVFAEILEK 231 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~i~l~--~~~~~~~~~~ll~~ 231 (272)
.+.+.++|.++...+.. ...+.++.++.++++++.+.+.|+++ |..+ ..+.+++++|+.++ +.+..++...|. +
T Consensus 255 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~-~ 332 (380)
T PRK06225 255 LGTNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLL-E 332 (380)
T ss_pred cCCCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHH-H
Confidence 45788888888888764 34666777888888899999999885 5433 23457889999986 345667777776 5
Q ss_pred cCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||..|++ .+.+++|++++.+++++++++++|++++
T Consensus 333 ~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~ 374 (380)
T PRK06225 333 RKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVV 374 (380)
T ss_pred CCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHH
Confidence 5999999987753 2467999999888999999999998763
No 91
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.3e-34 Score=243.84 Aligned_cols=245 Identities=19% Similarity=0.261 Sum_probs=191.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-C-CC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-L-KG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l-~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..|.+. |...++..| +++.+|++.+ +..++ + +. .++++++++++||||||.+++.+++++|+++|+ +
T Consensus 109 d~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~-~ 186 (369)
T PRK08153 109 DPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALP-E 186 (369)
T ss_pred CEEEECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC-C
Confidence 56777776655 777778888 9999998655 33333 2 21 257899999999999999999999999999987 4
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
++++|+||+|.++.+++...++. ...+++++++||||++|+||+|+||+++++++ ++.+...... .+
T Consensus 187 ~~~lI~DE~y~~~~~~~~~~~~~---~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~--------~~~l~~~~~~--~~ 253 (369)
T PRK08153 187 TTLLVLDEAYCETAPAGAAPPID---TDDPNVIRMRTFSKAYGLAGARVGYAIGAPGT--------IKAFDKVRNH--FG 253 (369)
T ss_pred CcEEEEeCchhhhcCcccchhhh---hcCCCEEEEecchHhccCcchheeeeecCHHH--------HHHHHHhhcC--CC
Confidence 99999999999887665333322 23468999999999999999999999998887 5566554432 45
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC--CChHHHHHHHHHhcCeE
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHIT 235 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~ 235 (272)
.+.++|.++.+++.+ .++.++.++.++++++.+.+.|++.|+.+. +.+++|+|+.++. ....++..+++++ ||.
T Consensus 254 ~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f~~~~~~~~~~~a~~l~~~l~~~-Gi~ 329 (369)
T PRK08153 254 MNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPL-PSATNFVAIDCGRDGAFARAVLDGLIAR-DIF 329 (369)
T ss_pred CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcEEEEECCCCcccHHHHHHHHHHC-CeE
Confidence 889999999999973 366788899999999999999998888755 4689999999862 3345666666655 999
Q ss_pred ee-CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 236 TV-PGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 236 v~-~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+. |+.. .+.+++|+++. ++++++.+++.|+++
T Consensus 330 v~~p~~~---~~~~~iRis~~-~~~~~~~~~~al~~~ 362 (369)
T PRK08153 330 VRMPGVA---PLDRCIRVSCG-PDEELDLFAEALPEA 362 (369)
T ss_pred EeeCCCC---CCCCeEEEecC-CHHHHHHHHHHHHHH
Confidence 95 6542 23579999986 788999999998875
No 92
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-33 Score=242.33 Aligned_cols=246 Identities=22% Similarity=0.305 Sum_probs=189.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 80 (272)
|.|++..|++. |...++..| +++.+|++++ +.+|++.+ .+.++++++|||||||.+++.+++++|++.++ +++
T Consensus 102 d~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~--~~~ 177 (353)
T PRK05387 102 RPLLFPDITYSFYPVYAGLYGIPYEEIPLDDD--FSIDVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAANP--DSV 177 (353)
T ss_pred CEEEEeCCCHHHHHHHHHHcCCEEEEeecCCC--CCCCHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC--CcE
Confidence 66788877765 777778889 9999998643 55564443 45688999999999999999999999988653 999
Q ss_pred EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh-ccCCcc
Q 036024 81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT-CFNGAS 159 (272)
Q Consensus 81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 159 (272)
+|+||+|.++. +. +........+++++++||||.+|++|+|+||+++++++ ++.+...... ...+.+
T Consensus 178 livDe~y~~~~--~~--~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~--------~~~l~~~~~~~~~~~~~ 245 (353)
T PRK05387 178 VVIDEAYVDFG--GE--SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPEL--------IEALNRVKNSFNSYPLD 245 (353)
T ss_pred EEEeCcccccC--Cc--chHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHH--------HHHHHHhhccCCCCCcC
Confidence 99999998753 21 11112223467899999999999999999999998877 5666655433 234578
Q ss_pred hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024 160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG 239 (272)
Q Consensus 160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g 239 (272)
.+.|.++.+++.+ .++.++.+++++++++.+.+.|++.|+.+.+ .+++|+|+.+++.+..++...|.+ +||.+.+.
T Consensus 246 ~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~ 321 (353)
T PRK05387 246 RLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLP-SKANFVFARHPSHDAAELAAKLRE-RGIIVRHF 321 (353)
T ss_pred HHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECC-CcCcEEEEECCCCCHHHHHHHHHH-CCEEEEEC
Confidence 8999988888864 3556788899999999999999999987754 578899999886666777777654 59999753
Q ss_pred CCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 240 SGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 240 ~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.. +..++++|+++. +.+++++++++|++++
T Consensus 322 ~~--~~~~~~iRis~~-~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 322 NK--PRIDQFLRITIG-TDEEMEALVDALKEIL 351 (353)
T ss_pred CC--CCCCCeEEEEeC-CHHHHHHHHHHHHHHh
Confidence 21 234679999986 6789999999998764
No 93
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.4e-34 Score=244.36 Aligned_cols=247 Identities=22% Similarity=0.339 Sum_probs=193.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...+...| +++.+|.+ ++.+|++. .+++++++++|||||||.+++.++++++++.|+
T Consensus 109 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~- 184 (367)
T PRK02731 109 DEVIYSEHGFAVYPIAAQAVGAKPVEVPAK---DYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVP- 184 (367)
T ss_pred CEEEEecCCHHHHHHHHHHcCCeEEEeccc---CCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCC-
Confidence 56777777665 666677788 99998884 34444332 267899999999999999999999999998875
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+++++|+||+|.++.+.+. ..++ ......+++++++|+||.||++|+|+||+++++++ ++.+..... .
T Consensus 185 ~~~~li~De~y~~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~--------~~~l~~~~~--~ 253 (367)
T PRK02731 185 PDVLVVLDEAYAEYVRRKDYEDGL-ELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEI--------IDALNRVRQ--P 253 (367)
T ss_pred CCcEEEEECcHHHhccCcCcccHH-HHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHH--------HHHHHHccC--C
Confidence 6999999999998776543 2223 22223467899999999999999999999999877 555654443 2
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi 234 (272)
...+.++|.++.+++.+ ..+.++.++.++++++.+.+.|++.|+.+.+ .+|+|+|+.++ ..+..++...|.+ +||
T Consensus 254 ~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g~~~~i~~~~~~~~~~~~~~L~~-~gI 329 (367)
T PRK02731 254 FNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAELGLEYIP-SVGNFILVDFDDGKDAAEAYQALLK-RGV 329 (367)
T ss_pred CCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC-CCceEEEEECCCCCCHHHHHHHHHH-CCE
Confidence 34678899999999874 4567888999999999999999998888764 57899999996 3456677776655 599
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.++..|+ .++++|+++. +.++++++++.|++++
T Consensus 330 ~v~~~~~~~--~~~~iRis~~-~~~e~~~l~~aL~~~~ 364 (367)
T PRK02731 330 IVRPVAGYG--LPNALRITIG-TEEENRRFLAALKEFL 364 (367)
T ss_pred EEEeCCCCC--CCCeEEEecC-CHHHHHHHHHHHHHHH
Confidence 999998875 2579999985 6788999999988753
No 94
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-34 Score=244.81 Aligned_cols=242 Identities=20% Similarity=0.277 Sum_probs=190.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|++. |...++..| +++++|++++ +.+|++. .++++++++++||||||.+++.+++++|+++|
T Consensus 106 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~--~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~- 182 (356)
T PRK04870 106 ATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD--FTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAA- 182 (356)
T ss_pred CEEEECCCCHHHHHHHHHHcCCEEEEecCCCC--CCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHC-
Confidence 66788777776 778888899 9999999744 4555333 25889999999999999999999999999988
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
++++|+||+|.++.... .. ..+. ..+++++++|||| +|+||+|+||+++++++ ++.+..... .
T Consensus 183 --~~~ii~De~y~~~~~~~-~~--~~~~-~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~--------i~~~~~~~~--~ 245 (356)
T PRK04870 183 --PGLVVVDEAYQPFAGDS-WL--PRLA-RFPNLLVMRTVSK-LGLAGLRLGYLAGHPAW--------IAELDKVRP--P 245 (356)
T ss_pred --CCEEEEECCchhhcCcc-hH--HHHh-hCCCEEEEecchh-hhhHHHhhhhhhCCHHH--------HHHHHHccC--C
Confidence 78999999999875432 11 1122 3357899999999 88999999999998877 556655442 2
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi 234 (272)
...+.++|.++..++.+ .+++++.+++++++++.+.+.|+++ |+.+.+ .+++|+|+.++ +..++. +.++++||
T Consensus 246 ~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~--~~~~~~-~~l~~~gI 319 (356)
T PRK04870 246 YNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVFP-SAANFILVRVP--DAAAVF-DGLKTRGV 319 (356)
T ss_pred CcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCeEEEEECC--CHHHHH-HHHHHCCE
Confidence 34778889888887763 3456888899999999999999988 887654 57889999987 445555 45566799
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.++..|+...++++|++++ +.++.++++++|+++|
T Consensus 320 ~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 320 LVKNLSGMHPLLANCLRVTVG-TPEENAQFLAALKAAL 356 (356)
T ss_pred EEEECCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHhC
Confidence 999999987666789999986 6788999999998875
No 95
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-33 Score=237.70 Aligned_cols=236 Identities=20% Similarity=0.298 Sum_probs=181.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
|.|++..|++. |...++..| +++.+|++++ +.++.....++++++++|||||||.+++.+++++|+ +++++|
T Consensus 97 d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~~~~~~~i~i~nP~NPTG~~~s~~~l~~l~----~~~~~i 170 (335)
T PRK14808 97 DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFV 170 (335)
T ss_pred CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhHccCCCEEEEeCCCCCCCCCcCHHHHHHHH----hcCCEE
Confidence 67777777766 888899999 9999999754 333322245678999999999999999988888776 479999
Q ss_pred EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024 82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (272)
|+||+|.++. +....++ . ...+++++++||||++|++|+|+||+++++++ ++.+.+... ..+.+.+
T Consensus 171 i~DE~Y~~f~-~~~~~~~--~-~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~--------~~~l~~~~~--~~~~~~~ 236 (335)
T PRK14808 171 ALDEAYYEFH-GESYVDL--L-KKYENLAVIRTFSKAFSLAAQRIGYVVSSEKF--------IDAYNRVRL--PFNVSYV 236 (335)
T ss_pred EEECchhhhc-CCchHHH--H-HhCCCEEEEEechhhccCcccceEEEEeCHHH--------HHHHHHhcC--CCCCCHH
Confidence 9999999874 2211121 1 23468999999999999999999999999887 666655542 2447788
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG 241 (272)
Q Consensus 162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~ 241 (272)
+|.++..++.. .++.++..+.++++++.+.+.|++.|+++.++ +|.|+|+.+++.+..++...+ .++||.++.
T Consensus 237 ~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~g~f~~~~l~~~~~~~~~~~l-~~~Gi~V~~--- 309 (335)
T PRK14808 237 SQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS-RGNFVFIFMEKEEKERLLEHL-RAKNIAVRS--- 309 (335)
T ss_pred HHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCeEEEEeCCCccHHHHHHHH-HHCCeEEEE---
Confidence 89888777763 34567777888888999999999999888776 678999999854555555554 555999984
Q ss_pred CCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 242 FGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
| .+++|+++ .+.++.+++++.|+++
T Consensus 310 ~----~~~~Risi-~~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 310 F----REGVRITI-GKREENDMILKELEVF 334 (335)
T ss_pred C----CCCeEEec-CCHHHHHHHHHHHHhh
Confidence 3 25899997 4578888999888764
No 96
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-33 Score=229.98 Aligned_cols=258 Identities=19% Similarity=0.270 Sum_probs=204.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC-----------CCCceEEEEe-cCCCccccCCCHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-----------TSRTDIIFFC-SPNNPTGHAATQNQLE 68 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-----------~~~~~~i~~~-~p~nptG~~~~~~~l~ 68 (272)
|.|++...++. .....+..| .+++++++.+ |+.++ +++ .++++++|.+ +-+||||.+++.+.++
T Consensus 149 d~vlie~~ty~~AL~s~~a~gv~~ipv~md~~-Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk 227 (472)
T KOG0634|consen 149 DHVLIEEYTYPSALQSMEALGVKIIPVKMDQD-GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRK 227 (472)
T ss_pred CceEEecccchHHHHhccccCceEEeccccCC-CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHH
Confidence 44555554433 566778889 9999999866 77666 433 2567888887 7799999999999999
Q ss_pred HHHHHHHHcCCEEEEcccCCccccCC---C------C-----------CCccccCCCCCceEEEecCccccCCCccceeE
Q 036024 69 QLVEFARNNGSIIIFDSAYAAYVTDG---C------P-----------RSIYEIPGAREVAIEISSFSKFSGFTGVRLGW 128 (272)
Q Consensus 69 ~l~~~~~~~~~~vi~D~~~~~~~~~~---~------~-----------~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~ 128 (272)
+|.++|++|+.+||+||.|..+-++. . . +++.++ +..+|||.+.||||.++ ||+|+||
T Consensus 228 ~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflsl-DtdGrVIr~dSFSKiia-PGlRlG~ 305 (472)
T KOG0634|consen 228 KIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSL-DTDGRVIRNDSFSKIIA-PGLRLGW 305 (472)
T ss_pred HHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccc-cccccEEeccchhhhhc-CcceeEE
Confidence 99999999999999999999777662 1 0 111122 24579999999999997 9999999
Q ss_pred EEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH----HHHHHHHHHHHHHHHHHHHHHHhC---C-
Q 036024 129 TVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL----EAVHSVVDYYKENTKILIDTLASL---G- 200 (272)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~---g- 200 (272)
+.+++.. ++++-......+.+++.+.|.++.+++...++ +|+.+.+..|.+++..+.+.|.+. +
T Consensus 306 it~~~~~--------l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~ 377 (472)
T KOG0634|consen 306 ITGNSLF--------LKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSV 377 (472)
T ss_pred eecCHHH--------HHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 9999988 56666666666677999999999999885444 899999999999999999999885 4
Q ss_pred CeEecCCCceEEEeecC--------CCC-hHHHHHHHHHhcCeEeeCCCCCCCC-C----CCeEEEEc-cCCHHHHHHHH
Q 036024 201 IKVYGGINAPYVWAHFP--------GRK-SWDVFAEILEKTHITTVPGSGFGPG-G----EEYIRISG-FGHRESILEAS 265 (272)
Q Consensus 201 ~~~~~~~~~~~~~i~l~--------~~~-~~~~~~~ll~~~gi~v~~g~~~~~~-~----~~~~R~s~-~~~~~~i~~~l 265 (272)
.++..|.+|+|+|++++ ..+ .++.....+.++||.+.+|+.|... . .-++|+++ ..+.|++++++
T Consensus 378 ~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~ 457 (472)
T KOG0634|consen 378 CEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGI 457 (472)
T ss_pred eEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHH
Confidence 67788999999999996 223 4566666777779999999999733 1 23999998 45889999999
Q ss_pred HHHHHhC
Q 036024 266 RRLEALF 272 (272)
Q Consensus 266 ~~l~~~l 272 (272)
++|..++
T Consensus 458 ~rf~~~i 464 (472)
T KOG0634|consen 458 ERFGSVI 464 (472)
T ss_pred HHHHHHH
Confidence 9997653
No 97
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1e-32 Score=234.07 Aligned_cols=239 Identities=20% Similarity=0.271 Sum_probs=186.0
Q ss_pred cccccCcc-cchHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 6 SVIVGQAG-DLEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 6 ~~~~~~~~-~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+++..|.+ .|...+...| ++++++ +.+ .+. +...+++++++++||||||.+++.+++++|+++|+++|+++|+
T Consensus 89 vl~~~p~y~~~~~~~~~~g~~~~~~~-d~~-~l~---~~~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~ 163 (330)
T TIGR01140 89 VLVLAPTYSEYARAWRAAGHEVVELP-DLD-RLP---AALEELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVV 163 (330)
T ss_pred EEEeCCCcHHHHHHHHHcCCEEEEeC-CHH-HHH---hhcccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEE
Confidence 55555544 4888888899 998888 211 111 1235678999999999999999999999999999999999999
Q ss_pred cccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH
Q 036024 84 DSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ 163 (272)
Q Consensus 84 D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (272)
||+|.++.+.. ++....+..+++++++|+||.+|++|+|+||++++++. ++.+..... ..+.+.++|
T Consensus 164 De~y~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~--------~~~l~~~~~--~~~~s~~~q 230 (330)
T TIGR01140 164 DEAFIDFTPDA---SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPAL--------LARLREALG--PWTVNGPAR 230 (330)
T ss_pred ECcccccCCcc---chhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHH--------HHHHHhcCC--CCCchHHHH
Confidence 99999877542 33333223477899999999999999999999998887 555554443 334678899
Q ss_pred HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCC
Q 036024 164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGF 242 (272)
Q Consensus 164 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~ 242 (272)
.++.+++.+. .+.+..+++++++++.+.+.|++++ +++.+ .+++|+|+.+++ ..++...|+++ ||.+.||..|
T Consensus 231 ~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~f~~~~~~~--~~~l~~~l~~~-gi~v~pg~~f 304 (330)
T TIGR01140 231 AAGRAALADT--AWQAATRARLAAERARLAALLARLGGLEVVG-GTALFLLVRTPD--AAALHEALARR-GILIRDFDNF 304 (330)
T ss_pred HHHHHHHhch--HHHHHHHHHHHHHHHHHHHHHHhCCCceECC-CCCeEEEEEcCC--HHHHHHHHHHC-CEEEEECCCC
Confidence 9999888743 3456788999999999999999996 56554 578999999873 56777777765 9999999999
Q ss_pred CCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024 243 GPGGEEYIRISGFGHRESILEASRRLE 269 (272)
Q Consensus 243 ~~~~~~~~R~s~~~~~~~i~~~l~~l~ 269 (272)
+..+.+++|++++...++ ++++++|+
T Consensus 305 ~~~~~~~iRi~~~~~~~~-~~~~~~l~ 330 (330)
T TIGR01140 305 PGLDPRYLRFALPTDEEN-DRLEEALA 330 (330)
T ss_pred CCCCCCEEEEEecCHHHH-HHHHHhhC
Confidence 644567999999766555 88887763
No 98
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-32 Score=236.89 Aligned_cols=242 Identities=24% Similarity=0.342 Sum_probs=183.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| +++.++.+. +|.+|++. .++++++++++||||||.+++.++ +.++|++
T Consensus 112 d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~---l~~l~~~ 186 (361)
T PRK00950 112 DEVIIPTPTFSYYEISAKAHGAKPVYAKREE--DFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEED---IRKILES 186 (361)
T ss_pred CEEEEcCCChHHHHHHHHHcCCEEEEeecCC--CCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHH---HHHHHHH
Confidence 56777666655 666677888 898888543 44555333 257899999999999999999655 4555667
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+++++|+||+|.++. +....+ +....+++++++||||.+|+||+|+||+++++++ ++.+...... .
T Consensus 187 ~~~~li~De~y~~~~-~~~~~~---~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~--------~~~~~~~~~~--~ 252 (361)
T PRK00950 187 TDALVFVDEAYVEFA-EYDYTP---LALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWL--------IDYYMRAKTP--F 252 (361)
T ss_pred CCcEEEEECchhhhC-ccchHH---HHHhcCCEEEEEeehHhhcCchhhcchhcCCHHH--------HHHHHHhcCC--C
Confidence 899999999998775 221222 2223367899999999999999999999998887 5555554432 3
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v 236 (272)
..+.++|.++.+++.+ .+++++.+++++++++.+.+.|. +.+.+ .+++|+|+.+++.+..++...+.++ ||.+
T Consensus 253 ~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~---~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~~-gv~v 325 (361)
T PRK00950 253 SLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP---FKVYP-SEANFVLVDVTPMTAKEFCEELLKR-GVIV 325 (361)
T ss_pred CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC---eeECC-CcceEEEEECCCCCHHHHHHHHHHC-CEEE
Confidence 3678888888888864 35567778888888888877776 55544 5789999999766677888877765 9999
Q ss_pred eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.||..|+..+++++|++++ +.+++++++++|++++
T Consensus 326 ~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 326 RDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred eeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 9999886556789999986 6779999999998764
No 99
>PLN02368 alanine transaminase
Probab=100.00 E-value=5.7e-33 Score=240.20 Aligned_cols=205 Identities=12% Similarity=0.165 Sum_probs=166.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..|++. |...+...| ++++++++++++|.+|++.+ .++|+++++|||||||.+++.+++++|
T Consensus 156 d~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l 235 (407)
T PLN02368 156 DGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREI 235 (407)
T ss_pred CEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHH
Confidence 66888888777 888888899 99999998877888885542 168999999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCC--CCCcccc----C---CCCCceEEEecCcccc-CCCccceeEEEe---cccccc
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGC--PRSIYEI----P---GAREVAIEISSFSKFS-GFTGVRLGWTVV---PEELLF 137 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~----~---~~~~~~i~~~s~sK~~-g~~g~r~G~~~~---~~~~~~ 137 (272)
+++|++++++||+||+|.++.+++. ..++..+ . ...+++|+++||||.| |+||+|+||+++ ++++
T Consensus 236 ~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~l-- 313 (407)
T PLN02368 236 LKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKT-- 313 (407)
T ss_pred HHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHH--
Confidence 9999999999999999999998753 2344332 1 1134899999999998 899999999985 6655
Q ss_pred cCCcchHHHHHhhhhhccCCcchHHHHHHHHhccccc---------HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC
Q 036024 138 SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG---------LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI 207 (272)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 207 (272)
++.+..... ...+++.++|.++.+++.... .++.+++.+.++++++.+.+.|+++ |+.+..|+
T Consensus 314 ------i~~~~~~~~-~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~ 386 (407)
T PLN02368 314 ------VEEIYKVAS-IALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTE 386 (407)
T ss_pred ------HHHHHHHhc-ccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCC
Confidence 566665533 334588899999999997431 1334567899999999999999998 99999999
Q ss_pred CceEEEeecC
Q 036024 208 NAPYVWAHFP 217 (272)
Q Consensus 208 ~~~~~~i~l~ 217 (272)
+++|+|++++
T Consensus 387 Gafy~~~~i~ 396 (407)
T PLN02368 387 GAMYSFPQIK 396 (407)
T ss_pred eeeEeccCCC
Confidence 9999998765
No 100
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.7e-32 Score=234.50 Aligned_cols=243 Identities=23% Similarity=0.371 Sum_probs=190.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...+...| +++.++++.+ +.+|+++ .++++++++++|+||||.+++.++++++++.|+
T Consensus 96 d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~- 172 (346)
T TIGR01141 96 DAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTP- 172 (346)
T ss_pred CEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-
Confidence 66777776665 666677888 9999998765 4455332 367899999999999999999999999988887
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+++++|+||+|.++...+..... . ...+++++++|+||.+|++|+|+||+++++++ ++.+..... ..
T Consensus 173 ~~~~ii~D~~y~~~~~~~~~~~~--~-~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~--~~ 239 (346)
T TIGR01141 173 EDALVVVDEAYGEFSGEPSTLPL--L-AEYPNLIVLRTLSKAFGLAGLRIGYAIANAEI--------IDALNKVRA--PF 239 (346)
T ss_pred CCcEEEEECchhhhcCCccHHHH--H-hhCCCEEEEehhhHhhhchhhhceeeecCHHH--------HHHHHhccC--CC
Confidence 79999999999976643221111 1 12346899999999999899999999998877 556654433 23
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT 235 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~ 235 (272)
+.+.++|.++.++++.. .+.++.+++++++++.+++.|+++ |+++.+ .++.|+|+.++. +.+++...|.+ +||.
T Consensus 240 ~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~~-~~~~~~~~L~~-~gI~ 314 (346)
T TIGR01141 240 NLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYP-SDANFVLIRFPR-DADALFEALLE-KGII 314 (346)
T ss_pred CCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC-CcCCEEEEecCC-CHHHHHHHHHH-CCeE
Confidence 46788999888888753 367889999999999999999988 888655 478899999986 66677776665 5999
Q ss_pred eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269 (272)
Q Consensus 236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~ 269 (272)
+.||..|+.. .+++|+|+. ++++++++++.|+
T Consensus 315 v~~g~~f~~~-~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 315 VRDLNSYPGL-PNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred EEeCCCcCCC-CCeEEEecC-CHHHHHHHHHHhC
Confidence 9999988543 789999975 7889999998874
No 101
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-32 Score=235.17 Aligned_cols=242 Identities=19% Similarity=0.242 Sum_probs=182.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|++. |...++..| ++++++.+. ++.+|++. .++++++++++||||||.+++.+++++|+++|
T Consensus 113 d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~- 189 (368)
T PRK03317 113 RTALGFVPSYSMHPIIARGTHTEWVEGPRAA--DFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAA- 189 (368)
T ss_pred CEEEEeCCChHHHHHHHHhcCCeeEEcccCC--CCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHC-
Confidence 56777777666 777778888 888887653 44555433 15789999999999999999988888888776
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
++++|+||+|.++.+.+.+ +........+++++++||||.+|++|+|+||+++++++ ++.+..... .
T Consensus 190 --~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~--------~~~l~~~~~--~ 256 (368)
T PRK03317 190 --PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAV--------VDALRLVRL--P 256 (368)
T ss_pred --CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHH--------HHHHHhcCC--C
Confidence 7999999999988765532 32333222357899999999999999999999998887 566654442 3
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT 235 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~ 235 (272)
.+.+.++|.++.+++.. .++..+.+++++++++.+.+.|.+.|+.+..+++++++|..++ +..++...+. ++||.
T Consensus 257 ~~~s~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~l~-~~Gv~ 331 (368)
T PRK03317 257 YHLSAVTQAAARAALRH--ADELLASVAALRAERDRVVAWLRELGLRVAPSDANFVLFGRFA--DRHAVWQGLL-DRGVL 331 (368)
T ss_pred CCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEEEEeccC--CHHHHHHHHH-HCCEE
Confidence 45888999998888874 2334556677889999999999999998888777777776654 4455666555 45999
Q ss_pred eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+.+.. . ++++|+++. +.++++++++.|++++
T Consensus 332 v~~~~---~--~~~iRi~~~-~~~~~~~~~~~l~~~~ 362 (368)
T PRK03317 332 IRDVG---I--PGWLRVTIG-TPEENDAFLAALAEVL 362 (368)
T ss_pred EEeCC---C--CCeEEEecC-CHHHHHHHHHHHHHHH
Confidence 98642 2 579999985 6778899998887753
No 102
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8e-32 Score=230.50 Aligned_cols=242 Identities=21% Similarity=0.290 Sum_probs=177.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC-C--CCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..|++. |...++..| +++.++++++.++.+| +++ . +++|+++++|||||||.+++.+++.+++ +++
T Consensus 101 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~---~~~ 177 (351)
T PRK14807 101 DVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKII---EKS 177 (351)
T ss_pred CEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHH---HhC
Confidence 67888887766 777778888 9999998754333333 222 1 4889999999999999999966666555 456
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
+.++|+||+|.++. +....+. . ...+++++++||||.+|+||+|+||+++++++ ++.+..... ...
T Consensus 178 ~~~~ivDe~y~~~~-~~~~~~~--~-~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~--------~~~~~~~~~--~~~ 243 (351)
T PRK14807 178 RGIVVVDEAYFEFY-GNTIVDV--I-NEFENLIVLRTLSKAFGLAGLRVGYAVANENI--------LKYLNLVKS--PYN 243 (351)
T ss_pred CCEEEEeCcchhhc-ccchHHH--h-hhCCCEEEEecchHhcccchhceeeeecCHHH--------HHHHHHccC--CCC
Confidence 78899999998763 3222221 1 23468999999999999999999999998887 555654433 234
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v 236 (272)
.+.++|.++.+++.+ .+.++..+.++++++.+.+.|++. |+.+.+ .+|+|+|+.++ +..++...++ ++||.+
T Consensus 244 ~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~-~~~~~~~i~~~--~~~~~~~~l~-~~gV~v 316 (351)
T PRK14807 244 INSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYP-SKTNFILVKFK--DADYVYQGLL-ERGILV 316 (351)
T ss_pred cCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECc-CCccEEEEEcC--CHHHHHHHHH-HCCEEE
Confidence 778999999999874 345667778889999999999876 887765 47889999997 3445555555 559999
Q ss_pred eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
.++... ...++++|++++ +.++.+.+++.|+++
T Consensus 317 ~~~~~~-~~~~~~iRis~~-~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 317 RDFSKV-EGLEGALRITVS-SCEANDYLINGLKEL 349 (351)
T ss_pred EECCCC-CCCCCeEEEEcC-CHHHHHHHHHHHHHh
Confidence 876532 234679999985 456677777777665
No 103
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=8.7e-32 Score=226.50 Aligned_cols=228 Identities=19% Similarity=0.282 Sum_probs=161.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 80 (272)
|.|++..|++. |...++..| +++.++.+.+ . +++ ..++++++++|||||||.+++.+++++|+++|++++++
T Consensus 78 d~vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~----l~~~~~~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~ 152 (311)
T PRK08354 78 RKVIIPRHTYGEYERVARFFAARIIKGPNDPE-K----LEELVERNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNAL 152 (311)
T ss_pred CeEEEeCCCcHHHHHHHHHcCCEEeecCCCHH-H----HHHhhcCCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcE
Confidence 67788877777 888889999 8887765432 1 222 23568899999999999999999999999999999999
Q ss_pred EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcch
Q 036024 81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160 (272)
Q Consensus 81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (272)
+|+||+|.++.+++.. . ..+++++++||||+||+||+|+||+++ . .+.+..... ....+.
T Consensus 153 li~De~y~~f~~~~~~--~-----~~~~vi~~~S~SK~~~l~GlRiG~~v~---~--------~~~l~~~~~--~~~~~~ 212 (311)
T PRK08354 153 LILDEAFIDFVKKPES--P-----EGENIIKLRTFTKSYGLPGIRVGYVKG---F--------EEAFRSVRM--PWSIGS 212 (311)
T ss_pred EEEeCcchhccccccc--c-----CCCcEEEEeccHhhcCCccceeeeeee---h--------HHHHHHcCC--CccCCH
Confidence 9999999998876421 1 156899999999999999999999998 3 344443332 233556
Q ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCC
Q 036024 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240 (272)
Q Consensus 161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~ 240 (272)
..+.++..++. ...+++.+.++.++++++.+.+.+ ...+ ++.|+++.++ ++.++...+. ++||.+.||.
T Consensus 213 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l------~~~~-~~~~~~~~~~--~~~~~~~~l~-~~gv~v~~g~ 281 (311)
T PRK08354 213 TGYAFLEFLIE-DDFEHLRKTMPLIWREKERFEKAL------YVKS-DANFFIKDVG--DAEKFVEFLK-RNGILVRDCT 281 (311)
T ss_pred HHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhc------CCCC-CCcEEEEECC--CHHHHHHHHH-HCCeEEEecc
Confidence 66776666665 334555555566555555544443 1234 4566666664 4556666665 5599999999
Q ss_pred CCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 241 GFGPGGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 241 ~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
.|+. ++++|++++. +++.+++.+.|++
T Consensus 282 ~f~~--~~~iRi~~~~-~~~~~~l~~al~~ 308 (311)
T PRK08354 282 SFGL--PGYIRFSVRD-REENEKLIRALRE 308 (311)
T ss_pred cCCC--CCeEEEEeCC-HHHHHHHHHHHHH
Confidence 9964 5899999864 3344444555444
No 104
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=7.8e-32 Score=230.83 Aligned_cols=245 Identities=24% Similarity=0.333 Sum_probs=181.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..|.+. |...++..| +++.+|++++.++.++ +++ .++++++++++||||||.+++.+++.++++.| +++
T Consensus 99 d~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~ 177 (352)
T PRK03321 99 DEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAV-PAD 177 (352)
T ss_pred CEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCC
Confidence 56666655443 667778888 9999999755444444 222 26789999999999999999988888887765 479
Q ss_pred CEEEEcccCCccccCCCCC-CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 79 SIIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
+++|+||+|.++.+++... ++... ...+++++++||||.||+||+|+||+++++++ ++.+.+.. ...+
T Consensus 178 ~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~--------~~~~~~~~--~~~~ 246 (352)
T PRK03321 178 VLVVLDEAYVEYVRDDDVPDGLELV-RDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEV--------IAALRKVA--VPFS 246 (352)
T ss_pred eEEEEechHHHhccCcCCCcHHHHH-hhCCCEEEEecchHHhhhHHHhhhhhcCCHHH--------HHHHHHhc--CCCC
Confidence 9999999999888765332 22222 23468999999999999999999999998877 56665442 3445
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV 237 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~ 237 (272)
.+.++|.++.+++.. ...+ .+..+.+.++++.+.+.|...|+.+.++ +|+|+|+.++. ...++...+ +++||.+.
T Consensus 247 ~s~~~q~~a~~~l~~-~~~~-~~~~~~~~~~r~~~~~~L~~~~~~~~~~-~g~~i~i~l~~-~~~~~~~~l-~~~gI~v~ 321 (352)
T PRK03321 247 VNSLAQAAAIASLAA-EDEL-LERVDAVVAERDRVRAALRAAGWTVPPS-QANFVWLPLGE-RTADFAAAA-AEAGVVVR 321 (352)
T ss_pred CCHHHHHHHHHHhcC-HHHH-HHHHHHHHHHHHHHHHHHHHCCCccCCC-CCCEEEEeCCC-CHHHHHHHH-HHCCEEEE
Confidence 888999888888863 2233 4444555666788999999888876554 68999999863 455666665 56699998
Q ss_pred CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+ |+ ..++|+++ .+.++.++++++|++++
T Consensus 322 ~---~~---~~~iRi~~-~~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 322 P---FA---GEGVRVTI-GAPEENDAFLRAARAWR 349 (352)
T ss_pred c---cC---CCcEEEee-CCHHHHHHHHHHHHHHh
Confidence 6 43 34699997 57888899888888753
No 105
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.3e-30 Score=221.73 Aligned_cols=230 Identities=21% Similarity=0.275 Sum_probs=167.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..|.+. |...++..| ++++++++.+ +.+|++. .+++++++++|||||||.+++.+++.++ + ++
T Consensus 95 d~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~~~~~~~v~~~~P~NPtG~~~~~~~l~~i---~-~~ 168 (337)
T PRK03967 95 KHIVITPPTFGMYSFYAKLNGIPVIDVPLKED--FTIDGERIAEKAKNASAVFICSPNNPTGNLQPEEEILKV---L-ET 168 (337)
T ss_pred CeEEEeCCChHHHHHHHHHcCCeEEEeecCCC--CCcCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHH---H-hc
Confidence 67788887776 667778888 9999998754 4455322 3678999999999999999997665555 4 36
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
++++|+||+|.++... +........+++++++||||.||+||+|+||+++++++ ++.+.+.... .+
T Consensus 169 ~~~ii~De~y~~~~~~----~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~--------i~~~~~~~~~--~~ 234 (337)
T PRK03967 169 GKPVVLDEAYAEFSGK----SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEI--------IDALYRIKPP--FS 234 (337)
T ss_pred CCEEEEECchhhhccc----chHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHH--------HHHHHhhcCC--CC
Confidence 9999999999987522 11122223467999999999999999999999998877 5666655443 35
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV 237 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~ 237 (272)
.+.++|.++..++.+ .++..+.++.+.++++.+.+.|.+.. .+++++|+|+.++ +...|+++ ||.+.
T Consensus 235 ~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~~~~~~~------~~~~l~~~-gi~v~ 301 (337)
T PRK03967 235 LNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYA----YPSDANFLLLKLD------AYDYLLEN-GIVVR 301 (337)
T ss_pred CCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCc----CCCCCcEEEEhHH------HHHHHHHC-CEEEE
Confidence 788999999888863 33556666677778888888887642 3568999999874 45666655 99998
Q ss_pred CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
++.. ...+++|+++.. .++.+++++.|++
T Consensus 302 ~~~~---~~~~~~Ri~~~~-~~~~~~l~~~l~~ 330 (337)
T PRK03967 302 KLSG---RLEGHIRVTVGK-REENDEFIKALKE 330 (337)
T ss_pred eCCC---CCCCeEEEecCC-HHHHHHHHHHHHH
Confidence 7642 235799999854 4444455555443
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.97 E-value=2.1e-29 Score=215.26 Aligned_cols=258 Identities=28% Similarity=0.491 Sum_probs=207.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCccc--C-CC--CCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFP--D-LK--GTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~--d-l~--~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...++..| +++.++.++++.+.. + ++ ..++++++++++|+||||.+++.+++++|+++|++
T Consensus 84 ~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~ 163 (350)
T cd00609 84 DEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKK 163 (350)
T ss_pred CEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHh
Confidence 56667666666 888888888 999999987765554 1 22 23789999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+|+++|+|++|+.+.+.+............+.+++++|++|.++.+|.|+||+++++ ++ .+.+........
T Consensus 164 ~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~--------~~~~~~~~~~~~ 235 (350)
T cd00609 164 HGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEEL--------LERLKKLLPYTT 235 (350)
T ss_pred CCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHH--------HHHHHHHHHhcc
Confidence 999999999999877665433211222334567999999999988999999999988 55 566666666656
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFPGRKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi 234 (272)
.+++...+.++..++.... ++.++.+++++++++++.+.|.+.+... ..+..++++|+.++.....+.+.++++++||
T Consensus 236 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi 314 (350)
T cd00609 236 SGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGV 314 (350)
T ss_pred cCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCE
Confidence 6788888998888888543 6778899999999999999999985543 4556789999999865566778888888899
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
.+.++..|...+..++|+++...++|+++++++|++
T Consensus 315 ~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~~ 350 (350)
T cd00609 315 VVRPGSAFGEGGEGFVRLSFATPEEELEEALERLAE 350 (350)
T ss_pred EEecccccccCCCCeEEEEeeCCHHHHHHHHHHhhC
Confidence 999988776556789999986669999999999863
No 107
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.4e-28 Score=188.01 Aligned_cols=253 Identities=19% Similarity=0.259 Sum_probs=196.3
Q ss_pred ccccccccCcccchHHhccc-c-eeEEeecCCCCCcccC-----CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 3 IDSSVIVGQAGDLEDEVGKY-C-NIEYLECGPGNNFFPD-----LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 3 ~d~~~~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~~~d-----l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
.|.+++.+|++.++...+.. + +++.+|++++.....| ++....+|++++++|+||||..+..+++.+|.+.-.
T Consensus 111 keKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~ 190 (375)
T KOG0633|consen 111 KEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPD 190 (375)
T ss_pred ccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCC
Confidence 46788888998855555554 4 9999999987666665 333468999999999999999999999999998643
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
|.++++||+|.+|...+ +-..+...+.|++++.++||.+|++|+|+||...+.+. +..+.+.+.+..
T Consensus 191 --nglVVvDEAYidFsg~~---S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~i--------a~iln~~KaPYN 257 (375)
T KOG0633|consen 191 --NGLVVVDEAYIDFSGVE---SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSI--------AEILNRAKAPYN 257 (375)
T ss_pred --CcEEEEeeeeEeecccc---ccchHhHhCCceeehhhhhhhcCcceeEeecccccHHH--------HHHHHhccCCcc
Confidence 89999999999987533 23334445678899999999999999999998888877 666666665544
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCCCceEEEeecCC---CChHHHHHHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGINAPYVWAHFPG---RKSWDVFAEILE 230 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~i~l~~---~~~~~~~~~ll~ 230 (272)
.+..+..++++++.+.....++..++.+-+.+.++-+.|.+. ++. +.++..++|+.+++.+ ..+..+..+++.
T Consensus 258 --iS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at 335 (375)
T KOG0633|consen 258 --ISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDAT 335 (375)
T ss_pred --ccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHH
Confidence 777888888899987666788899999999999999999987 333 4566788999999973 344567777888
Q ss_pred hcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 231 KTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 231 ~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+.|+.++--. -.+..+|++|++. .++|+-..+++.|++.+
T Consensus 336 ~~gVvVRfrg-se~~c~G~lRitv-Gt~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 336 KMGVVVRFRG-SEEGCKGYLRITV-GTPEENTVLMKCLKQFL 375 (375)
T ss_pred hcceEEEEcC-CccccceeEEEEc-CCcccchHHHHHHHhhC
Confidence 8899996311 1133589999997 46667777888888764
No 108
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.95 E-value=8.3e-26 Score=191.94 Aligned_cols=229 Identities=14% Similarity=0.123 Sum_probs=168.2
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
|...++..| +++.. .+.+ . ++..+++++|+++ ++||+|.+++.+++++|+++|+++++++++||+|..+..+
T Consensus 111 ~~~~~~l~ga~~~~~-~~l~-~----l~~~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~ 183 (346)
T TIGR03576 111 IPRSCKLAGAEYFES-DELS-E----LKKIDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRR 183 (346)
T ss_pred HHHHHHHcCCEEecc-CCHH-H----HhhCcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccc
Confidence 656666667 54322 1111 1 2233567887775 4689999999999999999999999999999999976533
Q ss_pred CC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc
Q 036024 94 GC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS 172 (272)
Q Consensus 94 ~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 172 (272)
.. ..+..... .+ ++++|+|| +++|+|+||+++++++ ++.+.+.......+.+++.|.++.++++.
T Consensus 184 ~~~~~~~~~~~---~d-ivv~s~SK--alaG~r~G~v~~~~~l--------i~~l~~~~~~~~~s~~~~~~~aa~~aL~~ 249 (346)
T TIGR03576 184 LYGQPPALDLG---AD-LVVTSTDK--LMDGPRGGLLAGRKEL--------VDKIKSVGEQFGLEAQAPLLAAVVRALEE 249 (346)
T ss_pred cCCCCCHHHcC---Cc-EEEeccch--hccccceEEEEeCHHH--------HHHHHHhhcCcccCccHHHHHHHHHHHhh
Confidence 11 11222221 12 67889999 4588999999999987 67777766655555788889988888874
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEE
Q 036024 173 EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRI 252 (272)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~ 252 (272)
.. .+.+++.++++.+.+.+.+++ +.+.++ .++|+|++++..++.+++.++++++||.++||+.|. ..++++|+
T Consensus 250 ~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~-~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~-~~~~~vRi 322 (346)
T TIGR03576 250 FE---LSRIRDAFKRKEEVYLRLFDK--LNVERT-PTGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMP-GASKTLRF 322 (346)
T ss_pred cc---HHHHHHHHHHHHHHHHHHHHh--CCCCcC-CCeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccC-CCCCeEEE
Confidence 32 256778999999999888884 445443 455899999754456788899999999999998883 34679999
Q ss_pred EccCCHH---HHHHHHHHHHHh
Q 036024 253 SGFGHRE---SILEASRRLEAL 271 (272)
Q Consensus 253 s~~~~~~---~i~~~l~~l~~~ 271 (272)
+++.+++ +++.+++.|++-
T Consensus 323 s~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 323 DLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred EEecChHHhcCHHHHHHHHHhc
Confidence 9977665 799999998864
No 109
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.1e-25 Score=176.46 Aligned_cols=216 Identities=23% Similarity=0.308 Sum_probs=166.5
Q ss_pred CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccC-CCCCceEEEecCccccCC
Q 036024 43 TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGF 121 (272)
Q Consensus 43 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~ 121 (272)
.+++.+|+++-|.||||.+++.+++.+|-++|+.||+.+++|.+|+. .+.+- -+.+.. --.+|++.+.|+|| .|+
T Consensus 177 ~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-PFP~i--ifsd~~~~w~~NiilC~SLSK-~GL 252 (417)
T COG3977 177 GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-PFPGI--IFSDATPLWNENIILCMSLSK-LGL 252 (417)
T ss_pred ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-CCCce--ecccccccCCCCEEEEeehhh-cCC
Confidence 37899999999999999999999999999999999999999999984 11211 111110 12368899999999 568
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHH-HHHHHHHHHHHHHHHH--
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSV-VDYYKENTKILIDTLA-- 197 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~-~~~~~~~~~~l~~~L~-- 197 (272)
||.|+|.+++++++ +..+.+.....+..++..+++.+..+++.... +..++. +-.|+.+.+...+.|+
T Consensus 253 PG~R~GIiIane~v--------iqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~ 324 (417)
T COG3977 253 PGSRCGIIIANEKV--------IQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRY 324 (417)
T ss_pred CCcceeEEEccHHH--------HHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 99999999999998 66777777777777888899989999885444 222332 2355555555555554
Q ss_pred --hCCCeEecCCCceEEEeecC--CCChHHHHHHHHHhcCeEeeCCCCCCCC-------CCCeEEEEccCCHHHHHHHHH
Q 036024 198 --SLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTHITTVPGSGFGPG-------GEEYIRISGFGHRESILEASR 266 (272)
Q Consensus 198 --~~g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~-------~~~~~R~s~~~~~~~i~~~l~ 266 (272)
+..+.+..|+++.|+|+.+. ...+.++.++|- ..|+.+.||+.|.++ ...++|+++..++++++.+++
T Consensus 325 lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LK-a~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva 403 (417)
T COG3977 325 LPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLK-ARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVA 403 (417)
T ss_pred cCccceeeecCCcceeehhhhccCCCCHHHHHHHHH-hCeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHH
Confidence 44788899999999999997 456667666655 449999999999743 367899999888999999999
Q ss_pred HHHHh
Q 036024 267 RLEAL 271 (272)
Q Consensus 267 ~l~~~ 271 (272)
+|.+.
T Consensus 404 ~lae~ 408 (417)
T COG3977 404 ILAEE 408 (417)
T ss_pred HHHHH
Confidence 88764
No 110
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.94 E-value=4.2e-25 Score=192.47 Aligned_cols=252 Identities=18% Similarity=0.175 Sum_probs=173.6
Q ss_pred cccccccCcc-----cchHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAG-----DLEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~-----~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..+.. .|...++..| +++.++.+.+ +.+|++. .++++++++++|+||||.+++ +++|++
T Consensus 110 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~---~~~i~~ 184 (401)
T PRK10874 110 DEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGAD--RLPDVDLLPELITPRTRILALGQMSNVTGGCPD---LARAIT 184 (401)
T ss_pred CEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCC--CcCCHHHHHHhcCcCcEEEEEeCCcccccCcCC---HHHHHH
Confidence 5667766543 2455667788 9999998754 3444332 378999999999999999987 789999
Q ss_pred HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH-------
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN------- 145 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~------- 145 (272)
+|+++|+++++|++|..... +..+..+. ..+++.|++|.+|.+| +|+++++++.+....+. ..
T Consensus 185 l~~~~g~~~ivD~a~~~g~~---~~~~~~~~----~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~-~~~~~~~~~ 254 (401)
T PRK10874 185 LAHQAGMVVMVDGAQGAVHF---PADVQALD----IDFYAFSGHKLYGPTG--IGVLYGKSELLEAMSPW-QGGGKMLTE 254 (401)
T ss_pred HHHHcCCEEEEECCcccccc---cCCchhcC----CCEEEEecccccCCCc--cEEEEEchHHHhcCCCe-ecCCcceEe
Confidence 99999999999999964222 22222221 2388899999998777 69999888764321110 00
Q ss_pred -HHH------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC
Q 036024 146 -DFN------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP 217 (272)
Q Consensus 146 -~~~------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~ 217 (272)
.+. ........+++...+.++.+++.........+..++.++.++++++.|+++ |+.+..+..+.++++.++
T Consensus 255 ~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~ 334 (401)
T PRK10874 255 VSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFA 334 (401)
T ss_pred eccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEEC
Confidence 000 000111223555555555555542222334567788889999999999987 888877666777777887
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 218 GRKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 218 ~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+.+..++...| +++||.+.+|..|.. +..+++|+|+ +++++|++++++.|+++
T Consensus 335 ~~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~ 395 (401)
T PRK10874 335 GVHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRA 395 (401)
T ss_pred CcCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHH
Confidence 66666666555 556999999987742 2257999996 56999999999999875
No 111
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.93 E-value=1.3e-24 Score=189.15 Aligned_cols=254 Identities=17% Similarity=0.112 Sum_probs=172.1
Q ss_pred cccccccCcc-----cchHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAG-----DLEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~-----~~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+ .|...++..| +++.+|.+.+....++ +++ .++++++++++|+||||.+++ +++|+++|
T Consensus 107 d~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~---~~~i~~~~ 183 (398)
T TIGR03392 107 DEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPD---LARAITLA 183 (398)
T ss_pred CEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCC---HHHHHHHH
Confidence 5667666543 2445667788 9999999755333333 322 268999999999999999987 78899999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH------
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN------ 148 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~------ 148 (272)
+++|+++++|++|+.... +..+..+. ..+++.|.+|.+|.+| +||++.+++.+....+ ......
T Consensus 184 ~~~~~~~ivD~a~~~~~~---~~~~~~~~----~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~-~~~~~~~~~~~~ 253 (398)
T TIGR03392 184 HQYGAVVVVDGAQGVVHG---PPDVQALD----IDFYAFSGHKLYGPTG--IGVLYGKTELLEAMPP-WQGGGKMLSHVS 253 (398)
T ss_pred HHcCCEEEEEhhhhcCCC---CCChhhcC----CCEEEEecccccCCCc--eEEEEEcHHHHhhCCC-eecCCceEeecc
Confidence 999999999999974322 22222221 2278889999988666 8999998877432111 000000
Q ss_pred --h------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC
Q 036024 149 --R------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR 219 (272)
Q Consensus 149 --~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~ 219 (272)
. .......+++.....++.+.++.......++..++.++.++++++.|+++ |+.+.++..+.++++.+++.
T Consensus 254 ~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~ 333 (398)
T TIGR03392 254 FDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV 333 (398)
T ss_pred ccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc
Confidence 0 00111123444455555555442222234677788899999999999987 88887655667777788766
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 220 KSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 220 ~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
...++...| +++||.+.+|..|.. +..+++|+|+ ++|++|++++++.|+++
T Consensus 334 ~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~ 392 (398)
T TIGR03392 334 HHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAA 392 (398)
T ss_pred CHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHH
Confidence 666766665 556999999987742 2257899996 67999999999999875
No 112
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.93 E-value=6e-25 Score=188.76 Aligned_cols=248 Identities=19% Similarity=0.117 Sum_probs=169.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|.|++.++++. +...+...| +++.++...-..+.-.++.. ++++++++.+++||||...+ +++|.++|+++++
T Consensus 101 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~ 177 (360)
T TIGR00858 101 DLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP---LPQLVALAERYGA 177 (360)
T ss_pred CEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC---HHHHHHHHHHcCc
Confidence 56666666555 666667777 87777642110111001111 35678888899999998866 8999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCC--CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--cc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--CF 155 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 155 (272)
++|+||+|..+.++....+.....+ ..+++++++|+||.+|.+| ||++++++. .+.+...... ..
T Consensus 178 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~~~--------~~~~~~~~~~~~~~ 246 (360)
T TIGR00858 178 WLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQAL--------IDYLINRARTLIFS 246 (360)
T ss_pred EEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCHHH--------HHHHHHhCccceec
Confidence 9999999986655443233222211 1357899999999999766 999988776 4444433222 12
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi 234 (272)
.+.+...+.++.++++.. .+.++.+++++++++++.+.|+++++++.+ ..++++|+.++. .+..++...|++ +||
T Consensus 247 ~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~-~gI 322 (360)
T TIGR00858 247 TALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEALGFTLMP-SCTPIVPVIIGDNASALALAEELQQ-QGI 322 (360)
T ss_pred CCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHcCCccCC-CCCCEEEEEeCCHHHHHHHHHHHHH-CCe
Confidence 224444444555555421 123567899999999999999998887765 468899999874 234566666655 599
Q ss_pred EeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHH
Q 036024 235 TTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLE 269 (272)
Q Consensus 235 ~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~ 269 (272)
.+.++..++ +.+.+++|+++. ++++++++++++|+
T Consensus 323 ~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 323 FVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred eEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 999876654 234568999974 59999999999874
No 113
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=1e-24 Score=190.40 Aligned_cols=240 Identities=17% Similarity=0.167 Sum_probs=162.1
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+...+...| ++..++.+......-.++. .+++++|++++|+||||.+++ +++|.++|+++++++|+||+|....
T Consensus 145 ~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~ 221 (410)
T PRK13392 145 MIEGIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGL 221 (410)
T ss_pred HHHHHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccC
Confidence 434455566 6655543211111111222 257899999999999999988 8899999999999999999999544
Q ss_pred cCCCCCCccccCCCCCc-eEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHH
Q 036024 92 TDGCPRSIYEIPGAREV-AIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLA 168 (272)
Q Consensus 92 ~~~~~~~~~~~~~~~~~-~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~ 168 (272)
+++....+....+..++ .++++|+||.+|.+| ||++++++. ++.+.+.... .+...+++.+.++.+
T Consensus 222 ~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~--------~~~l~~~~~~~~~s~~~~~~~~~a~~a 290 (410)
T PRK13392 222 YGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADL--------IDFVRSFAPGFIFTTALPPAVAAGATA 290 (410)
T ss_pred cCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHH--------HHHHHHhCcchhccCcCCHHHHHHHHH
Confidence 44332333222222222 388899999999888 999887776 4555444332 222345566777777
Q ss_pred hcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-CCC
Q 036024 169 CLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-PGG 246 (272)
Q Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-~~~ 246 (272)
+++... .....+++++++++++++.|+++|+++.++ .+.++.+.++.. ...++..+|++++||.+.++.... +.+
T Consensus 291 aL~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~ 367 (410)
T PRK13392 291 AIRHLK--TSQTERDAHQDRVAALKAKLNANGIPVMPS-PSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRG 367 (410)
T ss_pred HHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCC
Confidence 776322 123456889999999999999999887765 455555555421 234677778777799999875443 335
Q ss_pred CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 247 EEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 247 ~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
..++|+++ ..+++|+++++++|+++
T Consensus 368 ~~~lRis~~~~~t~edid~l~~aL~~~ 394 (410)
T PRK13392 368 TERLRITPTPLHDDEDIDALVAALVAI 394 (410)
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 67899997 46999999999999875
No 114
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=1.4e-24 Score=177.18 Aligned_cols=258 Identities=19% Similarity=0.207 Sum_probs=188.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC----------CCceEEEEecCCCccccCCCHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT----------SRTDIIFFCSPNNPTGHAATQNQLEQLV 71 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~----------~~~~~i~~~~p~nptG~~~~~~~l~~l~ 71 (272)
|.|+++-|.++ |...++.+| ..+++=++++.+|.+|.+++ -++|+++++||.||||++++.+.+++|+
T Consensus 162 ~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~ 241 (475)
T KOG0258|consen 162 TGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGII 241 (475)
T ss_pred CceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHH
Confidence 45666555555 888888888 99999999999999995552 4789999999999999999999999999
Q ss_pred HHHHHcCCEEEEcccCCccccCCC--CCCc----cccCCC-CC--ceEEEecCcccc-CCCccceeEEEecccccccCCc
Q 036024 72 EFARNNGSIIIFDSAYAAYVTDGC--PRSI----YEIPGA-RE--VAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGF 141 (272)
Q Consensus 72 ~~~~~~~~~vi~D~~~~~~~~~~~--~~~~----~~~~~~-~~--~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~ 141 (272)
.+|.+++++++.||+|++.+|.+. ..+. .++... ++ .++..+|.||.+ |-.|.|-||+-.-+-. +
T Consensus 242 ~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~-----p 316 (475)
T KOG0258|consen 242 CFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD-----P 316 (475)
T ss_pred HHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC-----h
Confidence 999999999999999999888763 2232 223211 22 347778889966 5578999997663322 0
Q ss_pred chHHHHHhhhhhccCCcchHHHHHHHHhccc-----ccH----HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceE
Q 036024 142 PVINDFNRIICTCFNGASNIAQAGGLACLSS-----EGL----EAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPY 211 (272)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-----~~~----~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 211 (272)
+..+++.+....... ++..+|...-..... ... ..-......++++++.+.+.++.+ |+.+..++++++
T Consensus 317 rv~~qi~Kl~si~lc-~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY 395 (475)
T KOG0258|consen 317 RVKQQIKKLASIKLC-PQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMY 395 (475)
T ss_pred hHHHHHHHHHhhhhc-CCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCcccee
Confidence 113344333333332 666666655555541 111 345667788999999999999998 999999999999
Q ss_pred EEeecC--C-----------CChHHHHHHHHHhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 212 VWAHFP--G-----------RKSWDVFAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 212 ~~i~l~--~-----------~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
.+..+. . ..+.-.+.+||+.+||+++||+.||. +|.=|+|.++-... + +.++++++
T Consensus 396 ~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~ 465 (475)
T KOG0258|consen 396 LFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKK 465 (475)
T ss_pred ecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHH
Confidence 887763 1 35566889999999999999999994 56778999974433 3 55555554
No 115
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.93 E-value=1.8e-24 Score=189.67 Aligned_cols=250 Identities=17% Similarity=0.122 Sum_probs=172.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCC------CCcc--cCCCCC---------CCceEEEEecCCCccc-cCCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG------NNFF--PDLKGT---------SRTDIIFFCSPNNPTG-HAAT 63 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~------~~~~--~dl~~~---------~~~~~i~~~~p~nptG-~~~~ 63 (272)
| |++.+|++. |.......| +++.+++++. ++|. +|++++ +++++|++++|+|||| ++++
T Consensus 118 D-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s 196 (460)
T PRK13238 118 D-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVS 196 (460)
T ss_pred C-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCC
Confidence 5 666666554 777778888 9999998742 3454 664431 3689999999999998 9999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCc--cccCC------CCCCccccCCCCCceEEEecCccccCCCccce------eEE
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAA--YVTDG------CPRSIYEIPGAREVAIEISSFSKFSGFTGVRL------GWT 129 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~--~~~~~------~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~------G~~ 129 (272)
.+++++|.++|++||+++|+|+++.. ..+.. ...++.++ +..++|++|.+.++|+|. |++
T Consensus 197 ~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i------~~~~~s~~D~~~~Sg~K~g~~~~GG~i 270 (460)
T PRK13238 197 MANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI------AREMFSYADGLTMSAKKDAMVNIGGLL 270 (460)
T ss_pred HHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH------hhhhcccCcEEEEecccCCCCcceeEE
Confidence 99999999999999999999997742 22221 12333222 123345555554445543 455
Q ss_pred EecccccccCCcchHHHHHhhh----hh-ccCCcchHHHHHHHHhcccc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 036024 130 VVPEELLFSSGFPVINDFNRII----CT-CFNGASNIAQAGGLACLSSE-GLEAVHSVVDYYKENTKILIDTLASLGIKV 203 (272)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 203 (272)
+++++.+ ...+.... .. +..+.+...|.|++..+.+. ..++...+ .+++++|.+.|.+.|+.+
T Consensus 271 ~~~d~~l-------~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~~~l~~~L~~~G~~~ 339 (460)
T PRK13238 271 CFRDEDL-------FTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQVEYLGEGLEEAGVPI 339 (460)
T ss_pred EcChHHH-------HHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHHHHHHHHHHHCCCCe
Confidence 6564331 44444432 11 23333445577777666532 22222332 336799999999999999
Q ss_pred ecCCCceEEEeecCCC---------ChHHHHHHHHHhcCeEeeCCCCCCCCC-----------CCeEEEEccC---CHHH
Q 036024 204 YGGINAPYVWAHFPGR---------KSWDVFAEILEKTHITTVPGSGFGPGG-----------EEYIRISGFG---HRES 260 (272)
Q Consensus 204 ~~~~~~~~~~i~l~~~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~-----------~~~~R~s~~~---~~~~ 260 (272)
..|.+|+++++++... .+.+++.+|++++||.+.|++.|.... ...+|+++.. +.++
T Consensus 340 ~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~ 419 (460)
T PRK13238 340 QTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSH 419 (460)
T ss_pred EccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHH
Confidence 9999999999998632 357799999999999999999886321 4789999866 8899
Q ss_pred HHHHHHHHHHh
Q 036024 261 ILEASRRLEAL 271 (272)
Q Consensus 261 i~~~l~~l~~~ 271 (272)
++.+.++|+.+
T Consensus 420 ~~~~~~~l~~~ 430 (460)
T PRK13238 420 MDYVAEALKAV 430 (460)
T ss_pred HHHHHHHHHHH
Confidence 99988888764
No 116
>PLN02822 serine palmitoyltransferase
Probab=99.93 E-value=2.6e-24 Score=190.19 Aligned_cols=238 Identities=16% Similarity=0.176 Sum_probs=172.3
Q ss_pred Hhcccc-eeEEeecCCCCCcccCCCCC-------CCc-eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 18 EVGKYC-NIEYLECGPGNNFFPDLKGT-------SRT-DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 18 ~~~~~g-~~~~~~~~~~~~~~~dl~~~-------~~~-~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
.+...+ +++.++.++..++..++++. +++ ++|++..++|+||.+.+ +++|+++|++||+++|+||+|+
T Consensus 209 ~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s 285 (481)
T PLN02822 209 GLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNS 285 (481)
T ss_pred HHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCcc
Confidence 334445 88888877655666555431 335 57777788999999998 8999999999999999999999
Q ss_pred ccccCCCCCCccccCCC--CCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc--chHHHH
Q 036024 89 AYVTDGCPRSIYEIPGA--REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA--SNIAQA 164 (272)
Q Consensus 89 ~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 164 (272)
...++..+..+.+..+. .+..++++||||++|.+| ||++++++. ++.+........++. ++..+.
T Consensus 286 ~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~i--------i~~~~~~~~~~~fsa~lPp~~~~ 354 (481)
T PLN02822 286 FGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARV--------VDHQRLSSSGYVFSASLPPYLAS 354 (481)
T ss_pred ccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHH--------HHHHHhcCCceeeccccCHHHHH
Confidence 76666443333333222 244588999999999888 999998887 455543333333333 355667
Q ss_pred HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC------C---hHHHHHHHHHhcCe
Q 036024 165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR------K---SWDVFAEILEKTHI 234 (272)
Q Consensus 165 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~------~---~~~~~~~ll~~~gi 234 (272)
|+.++++.. .. ..+++++++++.+++++.|++. |+.+..+.+++++++.+++. + ..+++.+|++++||
T Consensus 355 Aa~~aL~~l-~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV 432 (481)
T PLN02822 355 AAITAIDVL-ED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSV 432 (481)
T ss_pred HHHHHHHHH-Hh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCE
Confidence 776776522 12 2578899999999999999987 88888777899999999642 1 25678888877799
Q ss_pred EeeCCC--CCCCC-CCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 235 TTVPGS--GFGPG-GEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 235 ~v~~g~--~~~~~-~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
.+.|+. .|+.. .+.++|++++ .+++++++++++|+++
T Consensus 433 ~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~ 474 (481)
T PLN02822 433 LVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRV 474 (481)
T ss_pred EEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 999773 33221 2457999864 6999999999999875
No 117
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.93 E-value=5.2e-24 Score=174.88 Aligned_cols=257 Identities=14% Similarity=0.170 Sum_probs=175.2
Q ss_pred cccccccCcccchHHh---cccc-eeEEeecCCCCCcccC-C----CCCCCceEEEEe-cCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGDLEDEV---GKYC-NIEYLECGPGNNFFPD-L----KGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~~~~~~---~~~g-~~~~~~~~~~~~~~~d-l----~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~ 73 (272)
+.|-++.|.|+|.+++ +.+| +.++||+.++ |...| + .+.+.+|.|+++ ..+||||.++|.+..++|+++
T Consensus 123 ~~vKfLCPvPGYDRHFai~E~~Giemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m 201 (425)
T PF12897_consen 123 EKVKFLCPVPGYDRHFAITEHFGIEMIPVPMTED-GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAM 201 (425)
T ss_dssp S--EEEEEES--HHHHHHHHHCT-EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS
T ss_pred cCceEEecCCCchHHHHHHHhhCcEEEecCCCCC-CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcC
Confidence 5688899999998776 6699 9999999988 65555 2 234889999998 779999999999999999998
Q ss_pred -HHHcCCEEEEcccCCcccc-CCCC-C---Ccc---ccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH
Q 036024 74 -ARNNGSIIIFDSAYAAYVT-DGCP-R---SIY---EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI 144 (272)
Q Consensus 74 -~~~~~~~vi~D~~~~~~~~-~~~~-~---~~~---~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~ 144 (272)
+...+..|+.|++|..... +..+ . .+. .-.+.+++++...|.||.. +||..++++.++++. +
T Consensus 202 ~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~N--------l 272 (425)
T PF12897_consen 202 KTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEAN--------L 272 (425)
T ss_dssp --SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHH--------H
T ss_pred CcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHH--------H
Confidence 3457999999999985444 2211 1 222 2256789999999999988 599999999999999 7
Q ss_pred HHHHhhhhhccCCcchHHHHHHHHhccccc---HHHHHHHHHHHHHHHHHHHHHHHhC-C-----CeEecCCCceEEEee
Q 036024 145 NDFNRIICTCFNGASNIAQAGGLACLSSEG---LEAVHSVVDYYKENTKILIDTLASL-G-----IKVYGGINAPYVWAH 215 (272)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g-----~~~~~~~~~~~~~i~ 215 (272)
+.+.+.....+.++..+.|..-.+++.+.. ..|+++.++.++-+.+.+.+.|++. | .++..|.+|+|++++
T Consensus 273 ~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld 352 (425)
T PF12897_consen 273 AWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLD 352 (425)
T ss_dssp HHHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEE
T ss_pred HHHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEe
Confidence 888888888888999999999999998643 2788888888888888888877653 3 478889999999999
Q ss_pred cCCCChHHHHHHHHHhcCeEeeC-CCCCCC---CCCCeEEEEc-cCCHHHHHHHHHHHHHh
Q 036024 216 FPGRKSWDVFAEILEKTHITTVP-GSGFGP---GGEEYIRISG-FGHRESILEASRRLEAL 271 (272)
Q Consensus 216 l~~~~~~~~~~~ll~~~gi~v~~-g~~~~~---~~~~~~R~s~-~~~~~~i~~~l~~l~~~ 271 (272)
... .......+++++.||.+.| |+.|.. .....+|++- +.+.||++.+++.+..+
T Consensus 353 ~~~-G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~c 412 (425)
T PF12897_consen 353 VLD-GTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATC 412 (425)
T ss_dssp EST-T-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHH
T ss_pred cCC-ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHH
Confidence 986 3456677788999999999 655531 1357899996 56899999999887643
No 118
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=6.4e-24 Score=173.96 Aligned_cols=250 Identities=20% Similarity=0.216 Sum_probs=196.1
Q ss_pred cccccCccc-chHHhcccc-eeEEeecCCCCCcccC-------CCCCCCceEEEEe-cCCCccccCCCHHHHHHHHHHHH
Q 036024 6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-------LKGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-------l~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|-+.+|+|+ ....+...| ++..+|.=...+-.+| ++..+...++++. ..|||||..++.+++++|+++.+
T Consensus 123 vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~ 202 (396)
T COG1448 123 VWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIK 202 (396)
T ss_pred EEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHH
Confidence 668889999 788999999 9988887654444455 3445777788887 55999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCC--CCCccccCCCCCceEEEecCccccCCCccceeEEEe--cccccccCCcchHHHHHhhh
Q 036024 76 NNGSIIIFDSAYAAYVTDGC--PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PEELLFSSGFPVINDFNRII 151 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~~~~~~~~~~~~~~~~~~~ 151 (272)
+.+.+.+.|-+|++|..+-. ...+.-+......+++..|+||.||+-|.|+|.+.. .++. ...+..+++....
T Consensus 203 ~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~---~a~~v~sqlk~~i 279 (396)
T COG1448 203 ERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAE---EADRVLSQLKAII 279 (396)
T ss_pred HcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHH---HHHHHHHHHHHHH
Confidence 99999999999998876532 222222222222379999999999999999999544 3322 2334466777777
Q ss_pred hhccCCcchHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCCCChH
Q 036024 152 CTCFNGASNIAQAGGLACLSSEGL-----EAVHSVVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPGRKSW 222 (272)
Q Consensus 152 ~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~~~~~ 222 (272)
....++++..+..++..+|.++.. .++..+++++.+++..|.+.|... .+.+...+.|+|.+..+ +.
T Consensus 280 R~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl----s~ 355 (396)
T COG1448 280 RTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL----SP 355 (396)
T ss_pred HhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC----CH
Confidence 788888999999999999986543 578999999999999999999985 47888888999988754 34
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
+.+.+|.+++||++..+ + |+|++. ++.+++.+.+.|.+++
T Consensus 356 ~QV~rLree~~IY~v~s--------G--Ri~vaGl~~~ni~~va~ai~~v~ 396 (396)
T COG1448 356 EQVDRLREEFGIYLVAS--------G--RINVAGLNTSNIDYVAKAIAAVL 396 (396)
T ss_pred HHHHHHHHhccEEEecC--------C--eeeeccCChhhHHHHHHHHHhhC
Confidence 77899999999999742 3 899754 8999999999998764
No 119
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.92 E-value=2.8e-23 Score=178.92 Aligned_cols=239 Identities=16% Similarity=0.151 Sum_probs=156.8
Q ss_pred ccccccc-C-cccchHHhcccc-eeEEeecCCCCCcccCCCC----C--------CCceEEEEecCCCccccCCCHHHHH
Q 036024 4 DSSVIVG-Q-AGDLEDEVGKYC-NIEYLECGPGNNFFPDLKG----T--------SRTDIIFFCSPNNPTGHAATQNQLE 68 (272)
Q Consensus 4 d~~~~~~-~-~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~--------~~~~~i~~~~p~nptG~~~~~~~l~ 68 (272)
|.|++.. + ++.| ..++..| +++.+|.+.+.++.+|++. + +++++|++++|+||||...+ ++
T Consensus 91 d~Vl~~~~~h~s~~-~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~ 166 (370)
T TIGR02539 91 DWVVLDGLAHYTSY-VAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AG 166 (370)
T ss_pred CEEEECCcccHHHH-HHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HH
Confidence 5556532 2 3335 4567778 9999998765556666443 1 26789999999999999876 88
Q ss_pred HHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024 69 QLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 69 ~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~ 148 (272)
+|+++|+++|+++|+|++|..... +...... +..++++|+||+++ +|.|+||+++++++ ++.+.
T Consensus 167 ~i~~la~~~~~~livDea~~~g~~---~~~~~~~----~~di~v~s~sK~~~-~~g~~G~l~~~~~~--------i~~l~ 230 (370)
T TIGR02539 167 KVAKVCREKGVPLLLNCAYTVGRM---PVSAKEI----GADFIVGSGHKSMA-ASGPCGVLGMSEEW--------EDIVL 230 (370)
T ss_pred HHHHHHHHcCCeEEEECccccCCc---CCCHHHc----CCCEEEeeCccccc-CCCCEEEEEECHHH--------Hhhhc
Confidence 899999999999999999986321 1122222 12377899999998 67789999999887 34443
Q ss_pred hhhhhcc--------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe--cCCCceEEEeecCC
Q 036024 149 RIICTCF--------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY--GGINAPYVWAHFPG 218 (272)
Q Consensus 149 ~~~~~~~--------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~i~l~~ 218 (272)
....... .+....++.++.+.+.. ..+++++..+. .++++++++.|+++|+++. .+..++|+++.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~l~~~~~~-~~~~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~ 308 (370)
T TIGR02539 231 RKSRYSPVKEVELLGCTSRGAPIVTMMASFPH-VVERVKRWDEE-VKKTRWFVAELEDIGFIQLGQKPKEHDLVKFETPG 308 (370)
T ss_pred ccccCCccceeeeecccccccHHHHHHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHHhCCcEEEccCCCcCceEEEECCc
Confidence 3322110 11111233334444431 12333444344 4445689999999999874 35578899888763
Q ss_pred C---------ChHHHHHHHHHhcCeE-eeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHHHHh
Q 036024 219 R---------KSWDVFAEILEKTHIT-TVPGSGFGPGGEEYIRISG-FGHRESILEASRRLEAL 271 (272)
Q Consensus 219 ~---------~~~~~~~~ll~~~gi~-v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l~~~ 271 (272)
. ....+...| +++||. +.++ ..+++|+++ ..+++|+++++++|+++
T Consensus 309 ~~~~~~~~~~~~~~~~~~L-~e~GI~~ir~~------~~~~iRis~~~~t~e~i~~l~~~L~~~ 365 (370)
T TIGR02539 309 FHEIAQKHKRRGYFLYEEL-KKRGIHGIRSG------QTKYFKLSVYGLTKEQVEYVVDSFEEI 365 (370)
T ss_pred hhHHhhhhccccHHHHHHH-HhCCCccccCC------cceEEEEEecCCCHHHHHHHHHHHHHH
Confidence 2 122345555 455997 5432 246899995 45999999999999875
No 120
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.92 E-value=3.1e-23 Score=180.95 Aligned_cols=254 Identities=17% Similarity=0.196 Sum_probs=172.5
Q ss_pred cccccccCc-----ccchHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQA-----GDLEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~-----~~~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+. ..|...++..| +++.+++++++...++ +++ .++++++++++|+||||.+++ +++|+++|
T Consensus 114 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~---~~~i~~~~ 190 (406)
T PRK09295 114 DNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENP---LAEMIALA 190 (406)
T ss_pred CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCC---HHHHHHHH
Confidence 456665532 12555666778 9999998755333333 322 268999999999999999988 78899999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH--------
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND-------- 146 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~-------- 146 (272)
+++++++++|++|.... .+..+..+. ..+++.|++|.+|.+| +||++++++.+... +.....
T Consensus 191 ~~~~~~vivD~a~~~g~---~~~~~~~~~----~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~-~~~~~g~~~~~~~~ 260 (406)
T PRK09295 191 HQHGAKVLVDGAQAVMH---HPVDVQALD----CDFYVFSGHKLYGPTG--IGILYVKEALLQEM-PPWEGGGSMIATVS 260 (406)
T ss_pred HHcCCEEEEEcccccCc---cccCchhcC----CCEEEeehhhccCCCC--cEEEEEchHhHhhC-CCcccCCceeeeee
Confidence 99999999999997532 122332221 2288899999888666 79999988764221 100000
Q ss_pred HHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-CceEEEeecC
Q 036024 147 FNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-NAPYVWAHFP 217 (272)
Q Consensus 147 ~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~i~l~ 217 (272)
... .......+++..+..++.++++.......++..++.++.++++++.|+++ |+++.++. .+.++.+.++
T Consensus 261 ~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~ 340 (406)
T PRK09295 261 LTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLG 340 (406)
T ss_pred cCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEEC
Confidence 000 01112234666666666666653333345778889999999999999887 78887753 2456666777
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 218 GRKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 218 ~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+....++.. .++++||.+..|+.|.. ..++.+|+|+ ++|++|+++++++|+++
T Consensus 341 ~~~~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i 401 (406)
T PRK09295 341 KHHAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRI 401 (406)
T ss_pred CcCHHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 656666555 45677999999987752 1246799995 67999999999999764
No 121
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.92 E-value=1.2e-23 Score=182.15 Aligned_cols=205 Identities=19% Similarity=0.174 Sum_probs=147.7
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++++++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+...+..... ...++ .++||.++ +
T Consensus 169 ~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~-~~~d~---~t~sK~~~-~ 243 (379)
T TIGR00707 169 DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYG-IEPDI---ITLAKGLG-G 243 (379)
T ss_pred hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcC-CCCCE---EEEccccc-C
Confidence 568889987667788864 689999999999999999999999998775554322222222 22232 26899999 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
|+|+||++++++. ++.+.........+.+.++|.++.+.++.... .+..++++++++.+++.|++.+..
T Consensus 244 G~riG~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~ 312 (379)
T TIGR00707 244 GVPIGATLAKEEV--------AEAFTPGDHGSTFGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKN 312 (379)
T ss_pred CcccEEEEEcHHH--------HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998877 45554433334455788999988888863221 346677888888888888765322
Q ss_pred E---ecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 203 V---YGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 203 ~---~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
. ..+..|.++|+.++. +..++...|. +.||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 313 ~~~~~~~~~g~~~~~~~~~-~~~~~~~~l~-~~Gv~v~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 313 YPNKEVRGKGLMLGIELEA-PCKDIVKKAL-EKGLLVNCAG------PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred CCCCccccCceEEEEEecC-cHHHHHHHHH-HCCcEEeeCC------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 1 112367889998864 3456666654 5599998853 47899995 469999999999999875
No 122
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.92 E-value=1.6e-23 Score=183.72 Aligned_cols=255 Identities=17% Similarity=0.182 Sum_probs=173.0
Q ss_pred cccccccC-cc----cchHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQ-AG----DLEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~-~~----~~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+ ++ .|...++..| +++.+++++++...++ +++ .++++++++++++||||.+++ +++|+++|
T Consensus 123 d~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~---~~~I~~l~ 199 (424)
T PLN02855 123 DEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILP---VEDIVHWA 199 (424)
T ss_pred CEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCC---HHHHHHHH
Confidence 45666543 11 2455567778 9999998766443333 322 268999999999999999998 77889999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH-------
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF------- 147 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~------- 147 (272)
+++|+++++|++|.. +..+..+..+. ..++++|++|.+|.+| +||++++++.+... +......
T Consensus 200 ~~~g~~vivD~a~~~---g~~~~~~~~~~----~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~-~p~~~g~~~~~~~~ 269 (424)
T PLN02855 200 HAVGAKVLVDACQSV---PHMPVDVQTLG----ADFLVASSHKMCGPTG--IGFLWGKSDLLESM-PPFLGGGEMISDVF 269 (424)
T ss_pred HHcCCEEEEEhhhhc---CCcCCCchhcC----CCEEEeecccccCCCc--cEEEEEchhhhhcC-CCEecCCCceeeee
Confidence 999999999999963 11122232222 2278999999887556 89999988774321 1110000
Q ss_pred ------H-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC------CceEEE
Q 036024 148 ------N-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI------NAPYVW 213 (272)
Q Consensus 148 ------~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~------~~~~~~ 213 (272)
. ........+++.....++.++++.......++.+++.++.++++++.|+++ |+++.++. .+.++.
T Consensus 270 ~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~ 349 (424)
T PLN02855 270 LDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCA 349 (424)
T ss_pred cCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEE
Confidence 0 000111223455555555555542222356888899999999999999887 88887642 245777
Q ss_pred eecCCCChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 214 AHFPGRKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 214 i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+.+++....++...|.+++||.+..|..|.+ +..+.+|+|+ ++|.+|++++++.|+++
T Consensus 350 ~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~ 415 (424)
T PLN02855 350 FNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDT 415 (424)
T ss_pred EEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 8887666667777766666999998886642 1246899996 68999999999999875
No 123
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.91 E-value=4.3e-23 Score=178.89 Aligned_cols=250 Identities=16% Similarity=0.079 Sum_probs=165.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCC-CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTS-RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 80 (272)
|.|++.++++. +...+...| +++.++......+.--++..+ +++++++.+++||||...+ +++|+++|+++|++
T Consensus 124 d~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~ 200 (385)
T PRK05958 124 DLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAP---LAELVALARRHGAW 200 (385)
T ss_pred CEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC---HHHHHHHHHHhCCE
Confidence 55666666555 555555567 777776531111111022111 3445555578999998866 89999999999999
Q ss_pred EEEcccCCccccCCCCCCcc---ccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--cc
Q 036024 81 IIFDSAYAAYVTDGCPRSIY---EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--CF 155 (272)
Q Consensus 81 vi~D~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 155 (272)
+|+||+|..+.++....... .+. ..+++++++|+||.+|.+| ||++.+++. .+.+...... ..
T Consensus 201 li~De~~~~g~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G---g~~~~~~~~--------~~~~~~~~~~~~~~ 268 (385)
T PRK05958 201 LLVDEAHGTGVLGPQGRGLAAEAGLA-GEPDVILVGTLGKALGSSG---AAVLGSETL--------IDYLINRARPFIFT 268 (385)
T ss_pred EEEECcccccccCCCCCchHHhhCCC-CCCceEEEEechhhcccCC---cEEEcCHHH--------HHHHHHhCccceec
Confidence 99999997654432221111 222 2356799999999998766 898888766 4444322211 12
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi 234 (272)
.+.+.....++.++++... .. ++..++++++++++.+.|++.|+++..+ .+.++++.+++ .+..++...|.+ +||
T Consensus 269 ~~~~~~~~aa~~aal~~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~gI 344 (385)
T PRK05958 269 TALPPAQAAAARAALRILR-RE-PERRERLAALIARLRAGLRALGFQLMDS-QSAIQPLIVGDNERALALAAALQE-QGF 344 (385)
T ss_pred CCCCHHHHHHHHHHHHHHh-cC-HHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCEEEEEeCCHHHHHHHHHHHHH-CCc
Confidence 2244454445555554221 11 5678899999999999999988887665 56788888874 244567777765 499
Q ss_pred EeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
.+.++..+. +.+.+++|+++. .+++++++++++|+++|
T Consensus 345 ~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 345 WVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred eEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 998865443 334578999974 59999999999999875
No 124
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=1.4e-22 Score=173.97 Aligned_cols=256 Identities=18% Similarity=0.172 Sum_probs=168.8
Q ss_pred cccccccC--ccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CC-CceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQ--AGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TS-RTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~--~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+ ++. +...++..| +++.+|.+++....++ +++ .+ +++++++++|+||||.+.+ +++|.++|+
T Consensus 75 ~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~ 151 (356)
T cd06451 75 DKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAK 151 (356)
T ss_pred CEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHH
Confidence 45555432 322 456677788 9999998764333333 222 13 8899999999999999988 778899999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc--chHHH------H
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF--PVIND------F 147 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~--~~~~~------~ 147 (272)
++|+++++|++|.. +..+.++.... .+ ++++|.+|.++.| .++||++.+++....... ..... .
T Consensus 152 ~~~~~li~D~~~~~---g~~~~~~~~~~--~d--~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (356)
T cd06451 152 KHDALLIVDAVSSL---GGEPFRMDEWG--VD--VAYTGSQKALGAP-PGLGPIAFSERALERIKKKTKPKGFYFDLLLL 223 (356)
T ss_pred hcCCEEEEeeehhc---cCccccccccC--cc--EEEecCchhccCC-CCcceeEECHHHHHHHHhcCCCCceeecHHHH
Confidence 99999999999863 22222232221 12 6677899999844 358999998877321100 00000 0
Q ss_pred Hhhh--h-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecC-CCC
Q 036024 148 NRII--C-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFP-GRK 220 (272)
Q Consensus 148 ~~~~--~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~-~~~ 220 (272)
.... . ....+++...+.++.+++........++..++.+++++++.+.|.+.|+++..+. .+.++|+.++ +.+
T Consensus 224 ~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
T cd06451 224 LKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVD 303 (356)
T ss_pred HhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCC
Confidence 0000 0 1222344444555555555333345577888999999999999999898886532 3455677776 445
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
..++...|.+++||.+.+|..+. .++++|+++ .++++|+++++++|++++
T Consensus 304 ~~~~~~~L~~~~gI~~~~g~~~~--~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 304 GDEVVRRLMKRYNIEIAGGLGPT--AGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred HHHHHHHHHHhCCEEEecccccc--cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 66677676666699999987432 346999997 468999999999999874
No 125
>PLN02483 serine palmitoyltransferase
Probab=99.91 E-value=4e-23 Score=182.98 Aligned_cols=251 Identities=18% Similarity=0.231 Sum_probs=168.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCC-----ceEEEEec-CCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSR-----TDIIFFCS-PNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~-----~~~i~~~~-p~nptG~~~~~~~l~~l 70 (272)
|.|++..+.+. +...++..| +++.++.+....++-.+++ .++ .++++++. ..|++|...+ +++|
T Consensus 186 d~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~~I 262 (489)
T PLN02483 186 GLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LPEI 262 (489)
T ss_pred CEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HHHH
Confidence 55666665555 666667778 8888886532222111221 122 36666664 4699999866 9999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCCCCCccccCC--CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~ 148 (272)
+++|+++++++|+||+|+....+..+.......+ ..+..|+++||||++|.+| ||++++++. ++.+.
T Consensus 263 ~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~~l--------i~~l~ 331 (489)
T PLN02483 263 VAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSKEL--------IQYLK 331 (489)
T ss_pred HHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCHHH--------HHHHH
Confidence 9999999999999999985444332222222211 2345699999999999777 999988887 56665
Q ss_pred hhhhh---ccCCcchHHHHHHHHhcc----cccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CC
Q 036024 149 RIICT---CFNGASNIAQAGGLACLS----SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RK 220 (272)
Q Consensus 149 ~~~~~---~~~~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~ 220 (272)
..... ....++...+. +.+.++ ..+.+...+++++++++++++++.|+++|+.+.++.+++.+|+.+.. ..
T Consensus 332 ~~~~~~~~~~~~~p~~~~~-~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~~~ 410 (489)
T PLN02483 332 RTCPAHLYATSMSPPAVQQ-VISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAK 410 (489)
T ss_pred HhCccccccCCcCHHHHHH-HHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCHHH
Confidence 44321 11112333333 344342 22223446678899999999999999999988877677787777652 23
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCC--CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 221 SWDVFAEILEKTHITTVPGSGFG--PGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 221 ~~~~~~~ll~~~gi~v~~g~~~~--~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
..++..+|+++ ||.+.+ ..|. +...+.+|++++ .++|++++++++|+++
T Consensus 411 ~~~~~~~Ll~~-GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~ 463 (489)
T PLN02483 411 IPAFSRECLKQ-NVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEV 463 (489)
T ss_pred HHHHHHHHHHC-CcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 45677777766 999997 4442 444578999874 5899999999999875
No 126
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=6e-23 Score=178.66 Aligned_cols=204 Identities=21% Similarity=0.215 Sum_probs=147.6
Q ss_pred CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++.+++||+| ..++++.+++|.++|+++++++|+||+|.++...+...+.......++ +.|+||.++ +
T Consensus 181 ~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~~~-~ 255 (396)
T PRK02627 181 DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD----IMTLAKGLG-G 255 (396)
T ss_pred CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC----EEEEcchhh-C
Confidence 6789999998899999 688999999999999999999999999998765543322222221223 347999999 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+|+||++++++. .+.+.......+.+.+++.|.++.++++.... ++..++++++.+.+++.|.++
T Consensus 256 G~rig~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~ 324 (396)
T PRK02627 256 GVPIGAVLAKEKV--------ADVFTPGDHGSTFGGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEK 324 (396)
T ss_pred CcccEEEEEcHHH--------HhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999877 44444333445556888999998888873222 223445555555555555443
Q ss_pred -C-CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 200 -G-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 200 -g-~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+ +.... ..|.++|+.++ .+..++...++++ ||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 325 ~~~~~~~~-~~g~~~~i~~~-~~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~l 392 (396)
T PRK02627 325 YPGIKEVR-GLGLMIGIELD-RPAAEIVKKALEK-GLLINVTG------DNVLRLLPPLIISKEEIDEAVDRLEEVL 392 (396)
T ss_pred CCCeeeec-cCcEEEEEEec-CcHHHHHHHHHHC-CeEEeecC------CCEEEEECCcccCHHHHHHHHHHHHHHH
Confidence 2 22222 35788999884 3566788888777 99998864 46799985 568999999999998763
No 127
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.91 E-value=1.8e-22 Score=173.08 Aligned_cols=242 Identities=18% Similarity=0.177 Sum_probs=164.1
Q ss_pred chHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
+...++..| +++.++.+++....++ +++ .++++.+++++++||||...+ +++|+++|+++++++|+|++++
T Consensus 89 ~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s 165 (355)
T TIGR03301 89 LAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSS 165 (355)
T ss_pred HHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEeccc
Confidence 456667788 9999998755444443 222 256678888899999999876 8999999999999999999876
Q ss_pred ccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcc-------hHHHHHhhh--hhccCCc
Q 036024 89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFP-------VINDFNRII--CTCFNGA 158 (272)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~ 158 (272)
.. ..+..+..+ +..++++|++|.+ |.+| +||++++++.+...... ....+.... .....++
T Consensus 166 ~g---~~~~~~~~~----~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 236 (355)
T TIGR03301 166 FG---AIPIDIEEL----DVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTP 236 (355)
T ss_pred cC---Ccccchhhc----CccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCC
Confidence 42 222233332 2338899999987 4456 79999998874321100 000011111 1123356
Q ss_pred chHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecCC---CChHHHHHHHHHh
Q 036024 159 SNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFPG---RKSWDVFAEILEK 231 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~~---~~~~~~~~~ll~~ 231 (272)
+...+.++.+++...... +.++..++++++++++.+.|+++|+++..+. .+.++|+.++. .+..++..++. +
T Consensus 237 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 315 (355)
T TIGR03301 237 PTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELK-E 315 (355)
T ss_pred cHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHH-H
Confidence 777777666666532222 2577888999999999999999998865442 24567888874 23345555554 5
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
.||.+.+|..+. .+++|+++. .++++++++++.|+++|
T Consensus 316 ~gi~i~~~~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 316 RGFVIYPGKLTL---ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CCEEEECCcccc---ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 599999987543 378999963 48999999999999875
No 128
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.91 E-value=9.1e-23 Score=176.67 Aligned_cols=238 Identities=16% Similarity=0.143 Sum_probs=165.2
Q ss_pred HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
..++..| +++.+|+++++.+.++ +++ .++++++++++|+||||.+++ +++|.++|+++|+++++|+++..
T Consensus 108 ~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~~ivD~a~~~--- 181 (382)
T TIGR03403 108 AFLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFP---IKEIGEICKERGVLFHTDAVQAI--- 181 (382)
T ss_pred HHHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHHHHHHHHHcCCEEEEechhhc---
Confidence 3445678 9999999765333333 322 257899999999999999998 77889999999999999999873
Q ss_pred CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc
Q 036024 93 DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS 172 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 172 (272)
+..+..+..+. .| +++.|++|.+|.+| +|++.+++...... . .............+++.+++.++.+.++
T Consensus 182 g~~~~~~~~~~--~D--~~~~s~~K~~gp~G--~g~l~vr~~~~~~p--~-~~g~~~~~~~~~gt~~~~~~~al~~al~- 251 (382)
T TIGR03403 182 GKIPVDVQKAG--VD--FLSFSAHKFHGPKG--VGGLYIRKGVELTP--L-FHGGEHMGGRRSGTLNVPYIVAMGEAMR- 251 (382)
T ss_pred CCCccCccccC--CC--EEEEcchhhCCCCc--eEEEEECCCCCCCC--c-ccCCCCCCCcccCCcChHHHHHHHHHHH-
Confidence 11122222221 12 88889999888778 68888776552111 0 1000001112234577777777777775
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC---ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC---
Q 036024 173 EGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN---APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG--- 245 (272)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--- 245 (272)
...+.++...+++++.++++.+.|+++ |+.+.++.. ..++.+.+++.+..++...| .++||.+..|+.|...
T Consensus 252 ~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~ 330 (382)
T TIGR03403 252 LANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDL-NKAGIAASTGSACASEDLE 330 (382)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhh-ccCCEEEEchhccCCCCCC
Confidence 223456778899999999999999886 788887532 45777788776777766665 5569999988776411
Q ss_pred --------------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 246 --------------GEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 246 --------------~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
..+.+|+|+ ++|++|+++++++|+++
T Consensus 331 ~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~ 372 (382)
T TIGR03403 331 ANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKA 372 (382)
T ss_pred cCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 136799996 67999999999999865
No 129
>PRK02948 cysteine desulfurase; Provisional
Probab=99.91 E-value=3.7e-23 Score=179.05 Aligned_cols=240 Identities=13% Similarity=0.119 Sum_probs=163.7
Q ss_pred chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+...++..| +++.+++++++...+| +++ .++++++++++|+||||.+++ +++|.++|+++++++++|+++...
T Consensus 104 ~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~g 180 (381)
T PRK02948 104 YFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTFG 180 (381)
T ss_pred HHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehh---HHHHHHHHHHcCCEEEEEChhhcc
Confidence 334556678 9999998755333333 332 257889999999999999987 778999999999999999877532
Q ss_pred ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhc
Q 036024 91 VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACL 170 (272)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 170 (272)
..+..+..+ +..+++.|+||.+|.+| +|+++++++... ................+++.+++.++.+++
T Consensus 181 ---~~~~~~~~~----~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~a~~~al 248 (381)
T PRK02948 181 ---KLPIDVFEM----GIDSLSVSAHKIYGPKG--VGAVYINPQVRW---KPVFPGTTHEKGFRPGTVNVPGIAAFLTAA 248 (381)
T ss_pred ---ccccCcccC----CCCEEEecHHhcCCCCc--EEEEEEcCCCCC---CCcccCCCCCCCcCCCCccHHHHHHHHHHH
Confidence 112222222 23488899999999788 799888776410 000000000011234457888888888888
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc-----eEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC
Q 036024 171 SSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA-----PYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG 245 (272)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-----~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 245 (272)
... .++.++.++++++.++++++.|+++|+++...... .++.+.+++.+..++...| +++||.+.+|+.|...
T Consensus 249 ~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~ 326 (381)
T PRK02948 249 ENI-LKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVG 326 (381)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCC
Confidence 743 24678889999999999999999988765533211 2333444554555666655 5669999998865321
Q ss_pred -----------------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 246 -----------------GEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 246 -----------------~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
..+.+|+|+ +++++|++++++.|+++
T Consensus 327 ~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~ 371 (381)
T PRK02948 327 KQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETI 371 (381)
T ss_pred CCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 147899997 46999999999999875
No 130
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.91 E-value=5.5e-23 Score=179.04 Aligned_cols=205 Identities=17% Similarity=0.159 Sum_probs=150.1
Q ss_pred CCceEEEEecCCCccccCC--CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA--TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++++|++. |.||+|.++ +.+.+++|+++|++||+++|+||+|.++.+.+...+.......++ +.|+||.++
T Consensus 183 ~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~s~sK~l~- 256 (403)
T PRK05093 183 DHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD----ILTSAKALG- 256 (403)
T ss_pred CCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC----EEEeccccc-
Confidence 456666666 878887765 889999999999999999999999998766654322222222233 458999999
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG- 200 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 200 (272)
+|+|+||+++++++ .+.+.......+.+.+++.|.++.+.++.... .+..++++++.+++.+.|++++
T Consensus 257 ~G~rig~vv~~~~i--------~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 325 (403)
T PRK05093 257 GGFPIGAMLTTAEI--------ASHFKVGTHGSTYGGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQ 325 (403)
T ss_pred CCcceEEEEEcHHH--------HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999887 44444333334456788899888887753221 4566889999999999998863
Q ss_pred ---CeEecCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 201 ---IKVYGGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 201 ---~~~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
+....+..|.++|+.++.. ...++...++++ ||.+.|+. .+++|++ +..+++++++++++|++++
T Consensus 326 ~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~-Gv~v~~~g------~~~lRl~~~~~~~~~~i~~~~~~l~~~l 398 (403)
T PRK05093 326 KYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEE-GVMVLVAG------PDVLRFAPSLVIEEADIDEGLARFEKAV 398 (403)
T ss_pred hCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHC-CeEEecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 2222334688999998632 355677777776 99998642 5789996 4558999999999998763
No 131
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.91 E-value=1e-22 Score=177.67 Aligned_cols=254 Identities=19% Similarity=0.199 Sum_probs=168.1
Q ss_pred cccccccCc-----ccchHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQA-----GDLEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~-----~~~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+. ..|...++..| +++.++.++++...++ +++ .++++++++++|+||||.+++ +++|.++|
T Consensus 109 ~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~---~~~i~~~~ 185 (403)
T TIGR01979 109 DEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNP---VEEIAKLA 185 (403)
T ss_pred CEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCC---HHHHHHHH
Confidence 445555542 12445556778 9999998854333333 222 367999999999999999988 88899999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH--------
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND-------- 146 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~-------- 146 (272)
+++|+++++|++|+... .+..+..+ +..+++.|++|.+|.+| +|+++++++.+....+ ....
T Consensus 186 ~~~~~~~ivD~a~~~g~---~~~~~~~~----~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~-~~~g~~~~~~~~ 255 (403)
T TIGR01979 186 HQVGAKVLVDGAQAVPH---MPVDVQAL----DCDFYVFSGHKMYGPTG--IGVLYGKEELLEQMPP-FLGGGEMIAEVS 255 (403)
T ss_pred HHcCCEEEEEchhhcCc---cccCcccc----CCCEEEEecccccCCCC--ceEEEEchHHHhcCCC-eecCCCceeecc
Confidence 99999999999997422 12222222 23388999999988666 8999988776432110 0000
Q ss_pred -----HHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC----ceEEEee
Q 036024 147 -----FNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN----APYVWAH 215 (272)
Q Consensus 147 -----~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~~~i~ 215 (272)
+... ......+++...+.++.+.++.......++.+++..+.++.+++.|+++ |+++.++.. +.++.+.
T Consensus 256 ~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~ 335 (403)
T TIGR01979 256 FEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFN 335 (403)
T ss_pred cCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEE
Confidence 0000 0011123455555555555542222234677889999999999999887 888877542 5566677
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCC------CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 216 FPGRKSWDVFAEILEKTHITTVPGSGFG------PGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~------~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+++.+..++.. .++++||.+.+|..|. ....+++|+|+ +++++|++++++.|+++
T Consensus 336 ~~~~~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~ 398 (403)
T TIGR01979 336 VEGVHPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKV 398 (403)
T ss_pred eCCcCHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHH
Confidence 77655556554 5566799999887542 11257899996 56999999999999765
No 132
>PRK10534 L-threonine aldolase; Provisional
Probab=99.91 E-value=5.5e-23 Score=174.87 Aligned_cols=237 Identities=16% Similarity=0.170 Sum_probs=153.8
Q ss_pred cccccccCccc--chHH-hcccc--eeEEeecCCCCCcccCCCC----C-C------CceEEEEecCCCccccCCCHHHH
Q 036024 4 DSSVIVGQAGD--LEDE-VGKYC--NIEYLECGPGNNFFPDLKG----T-S------RTDIIFFCSPNNPTGHAATQNQL 67 (272)
Q Consensus 4 d~~~~~~~~~~--~~~~-~~~~g--~~~~~~~~~~~~~~~dl~~----~-~------~~~~i~~~~p~nptG~~~~~~~l 67 (272)
|.|++..|++. |... ....+ +.+.++.+. ++.+|+++ . + ++++++++||+ ||.+++.+++
T Consensus 74 d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l 149 (333)
T PRK10534 74 EEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYL 149 (333)
T ss_pred CeeEEechhhhhHhcCCchHHhcCceEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHH
Confidence 55665555544 2211 22333 556666643 45666433 1 2 58899999765 5999999999
Q ss_pred HHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcccee-EEEecccccccCCcchHHH
Q 036024 68 EQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLG-WTVVPEELLFSSGFPVIND 146 (272)
Q Consensus 68 ~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G-~~~~~~~~~~~~~~~~~~~ 146 (272)
++|+++|+++++++++||+|..............+....++++ .||||.+|++ +| |++++++. ++.
T Consensus 150 ~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~~~~~--------i~~ 216 (333)
T PRK10534 150 KQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT--ICLSKGLGTP---VGSLLVGNRDY--------IKR 216 (333)
T ss_pred HHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE--EEeEcCCCCc---ccceEEcCHHH--------HHH
Confidence 9999999999999999999863221110122222222223333 4899998854 67 67777777 566
Q ss_pred HHhhhhhccCC--cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHH
Q 036024 147 FNRIICTCFNG--ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDV 224 (272)
Q Consensus 147 ~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~ 224 (272)
+.......... .+.+.+.++.+.++. . .+..++.+++++++.+.|+++|+++.++ +++|+|+.++.....++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~----~-~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~nfv~~~~~~~~~~~~ 290 (333)
T PRK10534 217 ARRWRKMTGGGMRQAGILAAAGLYALKH----N-VARLQEDHDNAAWLAEQLREAGADVMRQ-DTNMLFVRVGEEQAAAL 290 (333)
T ss_pred HHHHHHHhCCchhhHHHHHHHHHHHHHh----h-HHHHHHHHHHHHHHHHHHHhCCCccCCC-CceEEEEECCchhHHHH
Confidence 66555433221 233445555555531 1 2333345556789999999999998876 69999999974334444
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 225 FAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
.++++++||.+.|+. ++|++. ..+++++++++++|++++
T Consensus 291 -~~~l~~~gi~v~~~~--------~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 291 -GEYMRERNVLINASP--------IVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred -HHHHHHcCeeecCCc--------eEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 456666699998763 578875 468999999999998764
No 133
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.91 E-value=2.7e-22 Score=174.94 Aligned_cols=249 Identities=18% Similarity=0.174 Sum_probs=164.1
Q ss_pred cccccccCccc-chHH-----hcccc-eeEEeecCCCC-CcccCCCC------CCCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDE-----VGKYC-NIEYLECGPGN-NFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~-----~~~~g-~~~~~~~~~~~-~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..+.+. +... ++..| +++.++++.+. ++.+|++. .++++++++++|+||+. . ++++
T Consensus 106 d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~~~--~---~~~~ 180 (402)
T cd00378 106 DTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYPRP--I---DFKR 180 (402)
T ss_pred CEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccCCC--c---CHHH
Confidence 56777665543 2222 55567 77777776542 45666443 25789999989888753 2 3899
Q ss_pred HHHHHHHcCCEEEEcccCC-ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHH
Q 036024 70 LVEFARNNGSIIIFDSAYA-AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDF 147 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~ 147 (272)
|+++|+++|+++|+|++|. ++.+.+....... ..+ ++++|+||++ +|.|.||+++++ ++ .+.+
T Consensus 181 I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~---~~d--v~~~s~sK~l--~G~~gg~i~~~~~~~--------~~~l 245 (402)
T cd00378 181 FREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP---GAD--VVTTTTHKTL--RGPRGGLILTRKGEL--------AKKI 245 (402)
T ss_pred HHHHHHhcCCEEEEEccchhhhhhcccCCCccc---CCc--EEEeccccCC--CCCCceEEEeccHHH--------HHHH
Confidence 9999999999999999974 4433332121111 122 7899999977 678899999987 55 5555
Q ss_pred HhhhhhccCCcchH-HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe-cCCCceEEEeecCC-CChHHH
Q 036024 148 NRIICTCFNGASNI-AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY-GGINAPYVWAHFPG-RKSWDV 224 (272)
Q Consensus 148 ~~~~~~~~~~~~~~-~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~i~l~~-~~~~~~ 224 (272)
.........+.+.. .+.++...+......+.++.+++++++++++.+.|++.|+.+. .+.+++++|+.++. ....+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~~~~~~~~~~ 325 (402)
T cd00378 246 NSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKA 325 (402)
T ss_pred HHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeCCccCCCHHH
Confidence 44443333323322 2222233333222225577888999999999999999998876 45679999999973 223345
Q ss_pred HHHHHHhcCeEeeCCCCCC----CCCCCeEEEEccC------CHHHHHHHHHHHHHhC
Q 036024 225 FAEILEKTHITTVPGSGFG----PGGEEYIRISGFG------HRESILEASRRLEALF 272 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~----~~~~~~~R~s~~~------~~~~i~~~l~~l~~~l 272 (272)
+.++++++||.+.++.... +....++|+++.. +++|++++++.|++++
T Consensus 326 ~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 326 AEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred HHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 5667788899998643222 1235689999632 5899999999998753
No 134
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.91 E-value=6.1e-22 Score=170.42 Aligned_cols=241 Identities=15% Similarity=0.132 Sum_probs=166.6
Q ss_pred hHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
...++..| +++.++.+++....++ +++ .++++++.+++++||||..++ +++|+++|+++++++++|++++.
T Consensus 94 ~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~ 170 (363)
T TIGR02326 94 VQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF 170 (363)
T ss_pred HHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc
Confidence 45567788 9999998765555554 222 346788888999999999988 78999999999999999998763
Q ss_pred cccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcc-------hHHHHHhhh---hhccCCc
Q 036024 90 YVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFP-------VINDFNRII---CTCFNGA 158 (272)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~ 158 (272)
+..+..+..+.. | ++++|++|.+ |.+| +||++++++.+...... ....+.... ....++.
T Consensus 171 ---g~~~~~~~~~~~--D--~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~ 241 (363)
T TIGR02326 171 ---GGIPIDIAELHI--D--YLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTS 241 (363)
T ss_pred ---cCcccchhhcCc--c--EEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCC
Confidence 333344444421 2 8889999987 4456 79999988764221000 000111111 1122346
Q ss_pred chHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecCC---CChHHHHHHHHHh
Q 036024 159 SNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFPG---RKSWDVFAEILEK 231 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~~---~~~~~~~~~ll~~ 231 (272)
+...+.++.++++....+ ..++++++++++++++++.|.++|+.+..+. .+...++.++. .+..++...| ++
T Consensus 242 ~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L-~~ 320 (363)
T TIGR02326 242 PTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRL-KE 320 (363)
T ss_pred cHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHH-HH
Confidence 777777776666532222 3577889999999999999999998876542 34456777764 2445555555 45
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||..+. .+.+|++. ..+.+++++++++|+++|
T Consensus 321 ~gi~v~~g~~~~---~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 321 QGFVIYPGKVSQ---VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred CCEEEECCcCCC---CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 599999987552 46899995 359999999999998875
No 135
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.90 E-value=1.2e-22 Score=173.87 Aligned_cols=251 Identities=20% Similarity=0.142 Sum_probs=163.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC---CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT---SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..+.+. +...+...| ++++++........--++.. ++++++++++++||||...+ +++|+++|+++|
T Consensus 86 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~ 162 (349)
T cd06454 86 DLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYG 162 (349)
T ss_pred CEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcC
Confidence 55666655444 445566677 88777542111110002221 35677888899999999876 899999999999
Q ss_pred CEEEEcccCCccccCCCCCCccccC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--cc
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--CF 155 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 155 (272)
+++|+|++|.....+.......... ...+..++++|+||.+|.+| ||++.+++. .+.+...... ..
T Consensus 163 ~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~--------~~~~~~~~~~~~~~ 231 (349)
T cd06454 163 AILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKEL--------IDYLRSYARGFIFS 231 (349)
T ss_pred CEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCHHH--------HHHHHHhchhhhcc
Confidence 9999999997533322111111111 12345699999999998655 998888776 3334332221 11
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi 234 (272)
.+.+...+.++.+.++.... .+..+++++++++.+.+.|+++|+.+.++.++.+.++.++ ..+..++...|.++ ||
T Consensus 232 ~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI 308 (349)
T cd06454 232 TSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALLER-GI 308 (349)
T ss_pred CCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCChHHHHHHHHHHHhC-Cc
Confidence 23555555556666542211 3667899999999999999998888777655555555554 33456677777766 99
Q ss_pred EeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 235 TTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 235 ~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
.+.++.... ..+.+++|+++. .+++++++++++|+++
T Consensus 309 ~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 309 YVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred eEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 998764221 223578999974 6999999999999864
No 136
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.90 E-value=2.2e-22 Score=175.64 Aligned_cols=211 Identities=20% Similarity=0.190 Sum_probs=150.9
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~ 122 (272)
+++++|++++++||+|.+.+ +++|.++|+++++++|+||+|....+++.+..+....+. .+..++++||||++|++
T Consensus 177 ~~~~~v~~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~ 253 (407)
T PRK09064 177 DRPKLIAFESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM 253 (407)
T ss_pred CCCeEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc
Confidence 46789999999999999987 899999999999999999999843334333333222221 23358899999999987
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 200 (272)
| ||++++++. ++.+...... ...+.++..+.++.+.++.... ....+++++++++++.+.|+++|
T Consensus 254 G---G~~~~~~~~--------~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g 320 (407)
T PRK09064 254 G---GYIAGSAAL--------VDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAAG 320 (407)
T ss_pred C---ceEecCHHH--------HHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcC
Confidence 7 999888776 4444433322 1223555566666666652211 13456889999999999999999
Q ss_pred CeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 201 IKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 201 ~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+++.++ .+.++++.++. ....++..+|++++||.+.+...+. +.+..++|+++ ..+++|++++++.|+++
T Consensus 321 ~~~~~~-~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 321 IPVMPN-ESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred CCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 887765 46677777753 2345677777777799998865433 23457899996 45999999999999875
No 137
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.90 E-value=2.7e-22 Score=174.83 Aligned_cols=210 Identities=22% Similarity=0.216 Sum_probs=150.5
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g 123 (272)
++++|++++|+||||.+.+ +++|.++|+++++++|+||+|....+++....+....+. .+..++++|+||++|.+|
T Consensus 177 ~~~~v~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G 253 (402)
T TIGR01821 177 RPKIIAFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG 253 (402)
T ss_pred CCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC
Confidence 5789999999999999987 899999999999999999999854444322222222121 223588899999999888
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 201 (272)
||++++++. ++.+...... .+.+.++..+.++.+.++..... +..+++.+++.+++++.|+++|+
T Consensus 254 ---G~i~~~~~~--------~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~ 320 (402)
T TIGR01821 254 ---GYIAASRKL--------IDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGI 320 (402)
T ss_pred ---ceeecCHHH--------HHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCC
Confidence 998888776 4555433221 23345666777777777532211 45566778999999999999998
Q ss_pred eEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 202 KVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 202 ~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
++.++ .+.++.+.++.. ...++...|++++||.+.+...+. +.+..++|+++ ..+++|++++++.|+++
T Consensus 321 ~~~~~-~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~ 393 (402)
T TIGR01821 321 PVIPN-PSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLV 393 (402)
T ss_pred CcCCC-CCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 87765 466666766531 245677777777799998865433 33457899996 56999999999999875
No 138
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.90 E-value=1e-22 Score=177.20 Aligned_cols=251 Identities=18% Similarity=0.164 Sum_probs=161.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+++. +...+...| +++.++......+.-.++. ..+++++++.+.+||||... ++++|.++|+++
T Consensus 127 d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~---~~~~l~~la~~~ 203 (397)
T PRK06939 127 DAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA---PLPEICDLADKY 203 (397)
T ss_pred CEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC---CHHHHHHHHHHh
Confidence 56677666655 555566667 7777765211111111221 12667777767899999864 499999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--c
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--C 154 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 154 (272)
++++|+||+|.....+....+.....+ .++..++++|+||.++ |+|+||++++++. ++.+...... .
T Consensus 204 ~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~--------~~~l~~~~~~~~~ 273 (397)
T PRK06939 204 DALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEV--------IDWLRQRSRPYLF 273 (397)
T ss_pred CCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHH--------HHHHHHhCccccc
Confidence 999999999963222221111111111 2234599999999994 3589999998877 4555433221 1
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcC
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTH 233 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~g 233 (272)
..+.+...+.++.+.++.. ...++++++++++++.+.+.|+++|+++..+.++ ++++.++. .+..++...|+++ |
T Consensus 274 ~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~-g 349 (397)
T PRK06939 274 SNSLAPAIVAASIKVLELL--EESDELRDRLWENARYFREGMTAAGFTLGPGEHP-IIPVMLGDAKLAQEFADRLLEE-G 349 (397)
T ss_pred cCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-EEEEEECCHHHHHHHHHHHHHC-C
Confidence 2222333344444444321 1225778999999999999999988877665444 44444542 3456777888777 9
Q ss_pred eEeeCCCCCC--CCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 234 ITTVPGSGFG--PGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 234 i~v~~g~~~~--~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
|.+.++. |. +.+.+++|+++ +.+++++++++++|++++
T Consensus 350 I~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 350 VYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred ceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 9998644 43 23457899886 468999999999998763
No 139
>PLN02721 threonine aldolase
Probab=99.90 E-value=5.4e-22 Score=170.11 Aligned_cols=246 Identities=14% Similarity=0.142 Sum_probs=156.6
Q ss_pred cccccccCcc-c-chH--Hhcccc-eeEEeecCCCCCcccC-CCC----C-----CCceEEEEec-CCCccccCCCHHHH
Q 036024 4 DSSVIVGQAG-D-LED--EVGKYC-NIEYLECGPGNNFFPD-LKG----T-----SRTDIIFFCS-PNNPTGHAATQNQL 67 (272)
Q Consensus 4 d~~~~~~~~~-~-~~~--~~~~~g-~~~~~~~~~~~~~~~d-l~~----~-----~~~~~i~~~~-p~nptG~~~~~~~l 67 (272)
|.|++..+.+ . |.. .+...| +++.+|.+++..+.+| +++ . ++++++++++ +|||||.+++.+++
T Consensus 81 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l 160 (353)
T PLN02721 81 SEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYT 160 (353)
T ss_pred CeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHH
Confidence 5677766653 2 332 456677 8888887654333333 222 1 4789999986 58999999999999
Q ss_pred HHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeE-EEecccccccCCcchHHH
Q 036024 68 EQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGW-TVVPEELLFSSGFPVIND 146 (272)
Q Consensus 68 ~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~-~~~~~~~~~~~~~~~~~~ 146 (272)
++|.++|+++|+++++|++|..........+........+ .++.|+||.++.+ +|| ++.++++ ++.
T Consensus 161 ~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~~~~--------~~~ 227 (353)
T PLN02721 161 DKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGAP---VGSVIVGSKSF--------IRK 227 (353)
T ss_pred HHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCCc---eeeEEecCHHH--------HHh
Confidence 9999999999999999999863221101122222211223 4455799998743 566 5566666 444
Q ss_pred HHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE-ecCCCceEEEeecCC---CCh
Q 036024 147 FNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKV-YGGINAPYVWAHFPG---RKS 221 (272)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~i~l~~---~~~ 221 (272)
+.........+.+..++.++..+.. ...+.++ .++..++++.+.+.|+++ ++.+ ..+..++++|+.++. ...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (353)
T PLN02721 228 AKRLRKTLGGGMRQVGVLAAAALVA--LQENVPK-LEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITA 304 (353)
T ss_pred HHHHHHhcCCCeehhHHHHHHHHHH--HHHHHHH-HHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccH
Confidence 4433332222222232222222211 1122333 344467788999999988 7754 333456789999874 356
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
.++..+|. ++||.+.|+. ..++|+++ +.+++|+++++++|++++
T Consensus 305 ~~~~~~L~-~~gi~v~~~~------~~~lR~~~~~~~~~~~i~~~~~~l~~~~ 350 (353)
T PLN02721 305 EKLCKSLE-EHGVLLMPGN------SSRIRVVTHHQISDSDVQYTLSCFQQAA 350 (353)
T ss_pred HHHHHHHH-hCCcEEecCC------CceEEEEecCcCCHHHHHHHHHHHHHHh
Confidence 66677766 6699999874 56899997 458999999999998764
No 140
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.90 E-value=9.9e-22 Score=170.89 Aligned_cols=258 Identities=15% Similarity=0.114 Sum_probs=176.3
Q ss_pred cccccccC-ccc--chHHhcccc-eeEEeecCCCCCcccC-CCC-C-----CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQ-AGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T-----SRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~-~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|+|++..+ ++. |...++..| +++.++.+++.++.++ +++ + ++++++++++++||||.+++.+++.++++
T Consensus 85 d~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~ 164 (401)
T PLN02409 85 DKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD 164 (401)
T ss_pred CEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh
Confidence 55666552 222 346667788 9999998865444433 222 1 37899999999999999999655555555
Q ss_pred HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcc----hHHHHH
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP----VINDFN 148 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~----~~~~~~ 148 (272)
|+++|+++|+|++++. +..+..+..+. ..+++.|.+|.++.| .++||++.+++.+....+. ..-.+.
T Consensus 165 -~~~~g~~~vvD~v~s~---g~~~id~~~~~----~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
T PLN02409 165 -CAQHPALLLVDGVSSI---GALDFRMDEWG----VDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWA 235 (401)
T ss_pred -hhccCcEEEEEccccc---CCccccccccC----ccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHH
Confidence 9999999999999873 22122233332 127777889999643 3699999988774321100 000000
Q ss_pred h---hhh---hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----CceEEEeecC-
Q 036024 149 R---IIC---TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAPYVWAHFP- 217 (272)
Q Consensus 149 ~---~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~i~l~- 217 (272)
. ... ....+++...+.++.++++.......++++++++++++++++.|+++|+++..+. ....+++.++
T Consensus 236 ~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~ 315 (401)
T PLN02409 236 DYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPE 315 (401)
T ss_pred HHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCC
Confidence 0 111 1133577777777777777444456788999999999999999999998887642 2245667776
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 218 GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 218 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+.+..++...+++++||.+.+|.. ......+|++. +++.+++..++.+|+++|
T Consensus 316 ~~~~~~l~~~l~~~~~i~i~~G~~--~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l 370 (401)
T PLN02409 316 GIDSAEIVKNAWKKYNLSLGLGLN--KVAGKVFRIGHLGNVNELQLLGALAGVEMVL 370 (401)
T ss_pred CCCHHHHHHHHHHhCCEEEEcCCC--cccCCEEEEcCCCCCCHHHHHHHHHHHHHHH
Confidence 556677778888999999988763 33467899995 568999999999998764
No 141
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.90 E-value=1.3e-22 Score=176.39 Aligned_cols=209 Identities=18% Similarity=0.213 Sum_probs=144.1
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g 123 (272)
++++|++.+++||||.+.+ +++|+++|++||+++|+||+|.....+....+.....+. .+..++++|+||.++ |
T Consensus 170 ~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~--g 244 (393)
T TIGR01822 170 RHRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG--G 244 (393)
T ss_pred CceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh--C
Confidence 6778888889999999976 899999999999999999999643333222222222211 234599999999875 5
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 201 (272)
+|+||++++++. .+.+...... ...+.+...+.++.+.++.. +..++++++++++++++.+.|++.|+
T Consensus 245 ~r~G~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~ 314 (393)
T TIGR01822 245 ASGGFTTARKEV--------VELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAAGF 314 (393)
T ss_pred CCcEEEEeCHHH--------HHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 789999998877 4555442221 12223444444455555421 23467889999999999999998888
Q ss_pred eEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC--CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 202 KVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG--PGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 202 ~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
.+.++ .+.++.+.++. ....++...|+++ ||.+. +..|. +.+...+|+++ ..+++|+++++++|+++
T Consensus 315 ~~~~~-~~~~~~i~~~~~~~~~~l~~~L~~~-gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~ 386 (393)
T TIGR01822 315 DIKPA-DHPIIPVMLYDAVLAQRFARRLLEE-GIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRI 386 (393)
T ss_pred CCCCC-CCCEEEEEeCCHHHHHHHHHHHHHC-CeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 77654 34455555543 3456677777766 99997 55553 23445789885 56899999999999875
No 142
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.90 E-value=2.3e-22 Score=175.10 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=150.7
Q ss_pred CCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++..++||||.++++++ +++|.++|++||+++|+||+|.++...+...........+| +.++||.+| +
T Consensus 182 ~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD----i~t~sK~l~-~ 256 (398)
T PRK03244 182 DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD----VVTLAKGLG-G 256 (398)
T ss_pred CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC----EEEEchhhh-C
Confidence 57889999888999999997655 99999999999999999999987655443221111121233 237899999 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
|+|+||++++++. .+.+.......+++.+++.+.++.+.++.... .+..++++++.+++++.|++++..
T Consensus 257 G~~ig~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 325 (398)
T PRK03244 257 GLPIGACLAFGPA--------ADLLTPGLHGSTFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHP 325 (398)
T ss_pred CcccEEEEEcHHH--------HhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999887 44444333444556888999999998763222 345677888888899999886542
Q ss_pred Ee--cCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 203 VY--GGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 203 ~~--~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
.. ....|.++|+.++......+..+++++ ||.+.+.. .+.+|+++ ..+++|+++++++|++++
T Consensus 326 ~~~~v~g~g~~~~i~~~~~~~~~~~~~l~~~-Gv~~~~~~------~~~iR~~p~~~~t~~~i~~~~~~l~~~l 392 (398)
T PRK03244 326 LVDHVRGRGLLLGIVLTAPVAKAVEAAAREA-GFLVNAVA------PDVIRLAPPLIITDAQVDAFVAALPAIL 392 (398)
T ss_pred ceeeEeeccEEEEEEEeccHHHHHHHHHHHC-CeEEeecC------CCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 21 113688999999743445566666655 99997732 46899995 468999999999998764
No 143
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.90 E-value=5.3e-22 Score=172.23 Aligned_cols=204 Identities=21% Similarity=0.179 Sum_probs=143.8
Q ss_pred CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++|++..++||+| .+++.+.+++|.++|++||+++|+||+|.++...+...........+| +.|+||.++ +
T Consensus 174 ~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~ 248 (389)
T PRK01278 174 PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD----IMAVAKGIG-G 248 (389)
T ss_pred CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC----EEEEehhcc-C
Confidence 5788999987799999 788999999999999999999999999998765543222111211223 348999998 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+|+||++++++. .+.+.......+.+.+++.+.++.+.++.... ....++++++.+++++.|+++
T Consensus 249 G~~ig~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~l~~~ 317 (389)
T PRK01278 249 GFPLGACLATEEA--------AKGMTPGTHGSTYGGNPLAMAVGNAVLDVILA---PGFLDNVQRMGLYLKQKLEGLVDR 317 (389)
T ss_pred CcceEEEEEcHHH--------HhccCCCCCCCCCCccHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998877 44444444455556888999988777763211 122334444444444444432
Q ss_pred -C-C-eEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 200 -G-I-KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 200 -g-~-~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
. + ....+ .|.++++.++. +..++..+++++ ||.+.|+. .+++||++ ..+++++++++++|++++
T Consensus 318 ~~~~~~~v~g-~G~~~~i~~~~-~~~~~~~~l~~~-GV~~~p~~------~~~lR~~p~~~~~~~~i~~~l~~l~~~l 386 (389)
T PRK01278 318 FPDVIEEVRG-KGLLLGLKCVV-PNRDLVQALRDE-GLLTVGAG------DNVVRLLPPLIITEEEIDEALERLERAA 386 (389)
T ss_pred CCCceeeEec-ccEEEEEEEec-CHHHHHHHHHHC-CeEEeecC------CCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 2 2 22233 57788887754 466778888877 99998863 57899984 468999999999998764
No 144
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.89 E-value=8.9e-22 Score=171.40 Aligned_cols=249 Identities=15% Similarity=0.164 Sum_probs=160.4
Q ss_pred cccccccCcc-c----chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAG-D----LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~-~----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..+.. . |...++..| +++.++++++ ++.+|++. .++++++++++|+||||.+.+ +++|++
T Consensus 105 d~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~~i~~ 180 (397)
T TIGR01976 105 DEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAASNTLGSIVD---LAAITE 180 (397)
T ss_pred CEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCC---HHHHHH
Confidence 5566655422 1 234456678 9999998763 24445332 257899999999999999987 899999
Q ss_pred HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH--Hhh
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF--NRI 150 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~--~~~ 150 (272)
+|+++|+++++|+++.. +..+..+..+. ..++++|++|.+| + |+|+++++++.+....+. ...+ ...
T Consensus 181 ~~~~~~~~~ivD~a~~~---~~~~~~~~~~~----~d~~~~s~~K~~g-~--~~G~l~~~~~~~~~l~~~-~~~~~~~~~ 249 (397)
T TIGR01976 181 LVHAAGALVVVDAVHYA---PHGLIDVQATG----ADFLTCSAYKFFG-P--HMGILWGRPELLMNLPPY-KLTFSYDTG 249 (397)
T ss_pred HHHHcCCEEEEehhhhc---cccCCCHHHcC----CCEEEEechhhcC-C--ceEEEEEcHHHHhhCCCc-cccCccCCC
Confidence 99999999999999853 11122222221 2267789999886 3 589999988774221111 0000 000
Q ss_pred -hhhccCCcchHH---HHHHHHhcccccH-----------HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCce
Q 036024 151 -ICTCFNGASNIA---QAGGLACLSSEGL-----------EAVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAP 210 (272)
Q Consensus 151 -~~~~~~~~~~~~---~~a~~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~ 210 (272)
......+++... ..++.+.+.+.+. ...++.+++..+..+++++.|+++ ++++..+ ..+.
T Consensus 250 ~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~ 329 (397)
T TIGR01976 250 PERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVP 329 (397)
T ss_pred cchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCc
Confidence 000011233232 3334444433220 135677888888999999999988 4888764 2456
Q ss_pred EEEeecCCCChHHHHHHHHHhcCeEeeCCCCCC---------CCCCCeEEEEc--cCCHHHHHHHHHHH
Q 036024 211 YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG---------PGGEEYIRISG--FGHRESILEASRRL 268 (272)
Q Consensus 211 ~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~---------~~~~~~~R~s~--~~~~~~i~~~l~~l 268 (272)
++.+.+++.+..++..+|.+ +||.+..|..|. +...+.+|+|+ +++++|++++++.|
T Consensus 330 ~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 330 TVSFTVHGLPPQRVVRRLAD-QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred eEEEEeCCcCHHHHHHHHHH-CCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 77777776556677766654 599999887664 12346899996 56999999998764
No 145
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=2.8e-21 Score=166.45 Aligned_cols=244 Identities=20% Similarity=0.202 Sum_probs=176.8
Q ss_pred chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
|....++.| +++.+|+++++.+..| ++. .++||++.+++.+|.||++.| +++|+++|+++|+++++|.+++.
T Consensus 128 w~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~- 203 (405)
T COG0520 128 WQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA- 203 (405)
T ss_pred HHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc-
Confidence 677777889 9999999855444444 332 378999999999999999977 99999999999999999999985
Q ss_pred ccCCCCCCccccCCCCCceEEEecCcc-ccCCCccceeEEEecccccccCCcchHH-------------HH-Hhhhhhcc
Q 036024 91 VTDGCPRSIYEIPGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVIN-------------DF-NRIICTCF 155 (272)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~g~~g~r~G~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~ 155 (272)
+..+..+..++.+ +++.|.+| .+|..| +|.+.++++.+....+.... .+ ......-.
T Consensus 204 --~h~~idv~~l~~D----f~afsgHKwl~gP~G--iGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~ 275 (405)
T COG0520 204 --GHLPIDVQELGCD----FLAFSGHKWLLGPTG--IGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEA 275 (405)
T ss_pred --CccCCCchhcCCC----EEEEcccccccCCCc--eEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhcc
Confidence 2223344444322 89999999 666447 89999999886432111000 00 00011122
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC---CceEEEeecCCCChHHHHHHHHHh
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI---NAPYVWAHFPGRKSWDVFAEILEK 231 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---~~~~~~i~l~~~~~~~~~~~ll~~ 231 (272)
.+++.....++.++++-......+++.++.++..+++.+.|+++ +++++++. .+..+.+.+++....++...|.++
T Consensus 276 gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~ 355 (405)
T COG0520 276 GTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEK 355 (405)
T ss_pred CCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhC
Confidence 23444444444444442223346889999999999999999998 79998875 477888999988888877777666
Q ss_pred cCeEeeCCCCCCCC------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 232 THITTVPGSGFGPG------GEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 232 ~gi~v~~g~~~~~~------~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
||.++.|..|... -+..+|+|+ ++|+||++++++.|+++
T Consensus 356 -gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405)
T COG0520 356 -GIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA 402 (405)
T ss_pred -CeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 8999999988632 244599995 78999999999999876
No 146
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.89 E-value=7.5e-22 Score=171.19 Aligned_cols=249 Identities=17% Similarity=0.165 Sum_probs=160.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|.|++..+++. +...+...| +++.++..+...+.-.+... ++++++++.+++||||.+.+ +++|.++|++||+
T Consensus 118 d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~---~~~i~~l~~~~~~ 194 (385)
T TIGR01825 118 DIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP---LPEIVELAERYGA 194 (385)
T ss_pred CEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC---HHHHHHHHHHhCC
Confidence 44555555444 443444455 55554311110111102211 36788888888999999877 8899999999999
Q ss_pred EEEEcccCCccccCCCCC-CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh-h-ccC
Q 036024 80 IIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC-T-CFN 156 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~ 156 (272)
++|+||+|..+.++.... ....+....+++++++|+||.+|.+| ||++++++. .+.+..... . ...
T Consensus 195 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~--------~~~~~~~~~~~~~~~ 263 (385)
T TIGR01825 195 VTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKEL--------IEYLKNRARPFLFST 263 (385)
T ss_pred EEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHH--------HHHHHHhCccccccC
Confidence 999999998765542111 11112222467899999999998666 999888776 444443322 1 122
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeE
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHIT 235 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~ 235 (272)
..+++.+.++.+.++.... . .+..++++++++++.+.|+++|+++..++ +.++++.++. .+..++...|+++ ||.
T Consensus 264 ~~~~~~~~a~~~al~~~~~-~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~-gi~ 339 (385)
T TIGR01825 264 AQPPAVVAALAAAVDELQR-S-PELMERLWDNTRFFKAGLGKLGYDTGGSE-TPITPVVIGDEKAAQEFSRRLFDE-GIF 339 (385)
T ss_pred CCCHHHHHHHHHHHHHHhc-C-HHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CCEEEEEECCHHHHHHHHHHHHHC-CcE
Confidence 2455666666666652111 1 34567778899999999999898887764 4466555543 2345677777777 999
Q ss_pred eeCCCCCC--CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 236 TVPGSGFG--PGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 236 v~~g~~~~--~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+. +..|+ +.+..++|+++ ..+++++++++++|+++
T Consensus 340 v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 340 AQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKV 378 (385)
T ss_pred Ec-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 85 44443 33457899975 57999999999999875
No 147
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.89 E-value=1.1e-21 Score=171.22 Aligned_cols=211 Identities=18% Similarity=0.190 Sum_probs=148.8
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~ 122 (272)
++++++++++++||+|.+.+ +++|.++|+++++++|+||+|....+++.+..+....+. .+..++++|+||.+|.+
T Consensus 176 ~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~ 252 (406)
T PRK13393 176 HRPKLVAFESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM 252 (406)
T ss_pred CCCEEEEEcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc
Confidence 35788889999999999988 889999999999999999999854444333332222222 22358889999999988
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 200 (272)
| ||++++++. .+.+...... .+.+.++..+.++.+.++.... . ...+++++++.+++++.|.+.|
T Consensus 253 G---G~~~~~~~~--------~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~-~-~~~~~~~~~~~~~l~~~L~~~g 319 (406)
T PRK13393 253 G---GYITGSAAL--------CDFIRSFASGFIFTTSLPPAVAAGALASVRHLKA-S-SAERERHQDRVARLRARLDKAG 319 (406)
T ss_pred C---ceeeCCHHH--------HHHHHHhCcCceecCccCHHHHHHHHHHHHHHhh-C-HHHHHHHHHHHHHHHHHHHHcC
Confidence 8 999887776 4555443332 2333555666667777753221 1 2234677899999999999888
Q ss_pred CeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 201 IKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 201 ~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+.+..+ .+.++.+.++. ....++..+|++++||.+.++.... +.+.+++|+++ ..+++|+++++++|+++
T Consensus 320 ~~~~~~-~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~ 393 (406)
T PRK13393 320 IPHLPN-PSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEI 393 (406)
T ss_pred CCcCCC-CCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 877654 45566666543 1335666777776799998865433 34557899986 56999999999999875
No 148
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.89 E-value=7.8e-22 Score=171.46 Aligned_cols=205 Identities=13% Similarity=0.082 Sum_probs=148.2
Q ss_pred CCceEEEEecCCCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++++++||||.+++++ .+++|.++|+++|+++|+||+|.++...+...........++ +.++||.+|.+
T Consensus 185 ~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd----i~~~sK~lg~g 260 (396)
T PRK04073 185 PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD----MYILGKALGGG 260 (396)
T ss_pred cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC----EEEecccccCC
Confidence 5778888888899999998765 599999999999999999999998655443222111111222 33589999977
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-- 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-- 200 (272)
|+|+||++++++. .+.+.......+++.+++++.++.+.++.... +...++.+++.+++.+.|++++
T Consensus 261 g~~ig~~~~~~~i--------~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~ 329 (396)
T PRK04073 261 VFPISCVAANRDI--------LGVFTPGSHGSTFGGNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKEIDNP 329 (396)
T ss_pred CCcceEEEEcHHH--------HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcCC
Confidence 8999999999877 44444333444555788999888888863222 2345667778889999998763
Q ss_pred -CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 201 -IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 201 -~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
+....+ .|.++++.++. ...++..+|+++ ||.+.+. +.+++|++ +..+++++++++++|++++
T Consensus 330 ~i~~~~~-~g~~~~~~~~~-~~~~~~~~l~~~-Gv~~~~~------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 330 MIKEVRG-RGLFIGVELNE-PARPYCEALKEE-GLLCKET------HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred cccceec-ceEEEEEEecc-hHHHHHHHHHHC-CeEEecC------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 222333 47788888864 445667776655 9999753 24689999 5679999999999999874
No 149
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.89 E-value=3.4e-21 Score=166.08 Aligned_cols=241 Identities=16% Similarity=0.143 Sum_probs=157.9
Q ss_pred hHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
...++..| +++.++.+++..+.++ +++ .++++++++++|+||||...+ +++|.++|+++++++|+|+++..
T Consensus 96 ~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~~~ 172 (368)
T PRK13479 96 AQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMSSF 172 (368)
T ss_pred HHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEccccc
Confidence 35667788 9999999765444444 322 246778999999999999988 78899999999999999977642
Q ss_pred cccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcch-------HHHHHhh--hhhccCCcc
Q 036024 90 YVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPV-------INDFNRI--ICTCFNGAS 159 (272)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~ 159 (272)
+..+..+..+. .+ ++++|++|.+ |.+| +||++++++.+....... ...+... .....++++
T Consensus 173 ---g~~~~~~~~~~--~d--~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 243 (368)
T PRK13479 173 ---GAIPIDIAELG--ID--ALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPP 243 (368)
T ss_pred ---CCccccccccC--ce--EEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCc
Confidence 22233333332 22 7778999975 6677 699999887732110000 0000000 011112466
Q ss_pred hHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC---ceEEEeecCC---CChHHHHHHHHHhc
Q 036024 160 NIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYGGIN---APYVWAHFPG---RKSWDVFAEILEKT 232 (272)
Q Consensus 160 ~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~i~l~~---~~~~~~~~~ll~~~ 232 (272)
...+.++.+++..... .+.++..++++++++.+++.|.++|+++..+.. ...+.+.++. .+..++...|.++
T Consensus 244 ~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 322 (368)
T PRK13479 244 THVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQ- 322 (368)
T ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHC-
Confidence 6665555555553222 245777899999999999999999988754321 2223334432 3456667776655
Q ss_pred CeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 233 HITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 233 gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
||.+.+|..+. .+++|++. +++++|+++++++|++++
T Consensus 323 gi~v~~g~~~~---~~~iRis~~~~~t~edi~~~l~~L~~~l 361 (368)
T PRK13479 323 GFVIYPGKLTQ---VDTFRIGCIGDVDAADIRRLVAAIAEAL 361 (368)
T ss_pred CEEEecCCCCC---CCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 99999876432 46899985 459999999999998763
No 150
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.89 E-value=5e-21 Score=164.60 Aligned_cols=241 Identities=15% Similarity=0.153 Sum_probs=154.9
Q ss_pred cccccccC-cccchHHhcccc-eeEEeecCCCCCcccCCCCC------------CCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQ-AGDLEDEVGKYC-NIEYLECGPGNNFFPDLKGT------------SRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~-~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~------------~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..+ ++.....++..| +++.++.++++.+.+|++.+ ++++++++++|+||||...+ +++
T Consensus 84 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~ 160 (361)
T cd06452 84 DWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKK 160 (361)
T ss_pred CEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHH
Confidence 45555533 233334567788 99999998765455663331 37899999999999998755 889
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
|+++|+++++++|+|++|..... +.+...+ +..++++|+||.++ ++.|+||++++++. .+.+..
T Consensus 161 i~~~~~~~~~~vivD~a~~~g~~---~~~~~~~----~~d~~~~s~~K~l~-~~~~~G~l~~~~~~--------~~~l~~ 224 (361)
T cd06452 161 IAKVCHEYGVPLLLNGAYTVGRM---PVSGKEL----GADFIVGSGHKSMA-ASAPIGVLATTEEW--------ADIVFR 224 (361)
T ss_pred HHHHHHHcCCeEEEECCcccCCc---CCCHHHc----CCCEEEecCCcccc-CCCCeEEEEECHHH--------HHHHhc
Confidence 99999999999999999974211 2223333 22389999999998 55699999998877 334333
Q ss_pred hhhh------c--cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec--CCCceEEEeecCC
Q 036024 150 IICT------C--FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG--GINAPYVWAHFPG 218 (272)
Q Consensus 150 ~~~~------~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~i~l~~ 218 (272)
.... . ..+.....+.++.+.+.. ..+..+ ..++..++++++++.|+++ |+++.. +..++++.++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~ 302 (361)
T cd06452 225 TSQMFKIKEVELLGCTLRGAPLVTLMASFPH-VKERVK-RWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPS 302 (361)
T ss_pred cccccccceeeeeccccCchHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCC
Confidence 2211 0 011111223223333321 112222 3333445668999999998 998873 3356677676652
Q ss_pred C---------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHHHHh
Q 036024 219 R---------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-FGHRESILEASRRLEAL 271 (272)
Q Consensus 219 ~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l~~~ 271 (272)
. ...++...|+++ ||.+.. +.....+|++. ..++++++.+++.|+++
T Consensus 303 ~~~~~~~~~~~~~~~~~~L~~~-gI~~~~-----~~~~~~~ri~~~g~~~e~~~~l~~al~~~ 359 (361)
T cd06452 303 FDEIAKKHKRRGYFLYSELKKR-GIHGIK-----PGLTRYFKLSTYGLTWEQVEYVVDAFKEI 359 (361)
T ss_pred cchhhhhccccchhHHHHHHHc-CceEEc-----CCCceEEEEEecCCCHHHHHHHHHHHHHH
Confidence 1 122566767555 998532 22245899996 45999999999999875
No 151
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=2.2e-21 Score=167.57 Aligned_cols=252 Identities=18% Similarity=0.131 Sum_probs=162.3
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. +....+..| +++.++.+.+....++ +++ .++++++++++|+||||.+.+ +++|.++|
T Consensus 89 ~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~ 165 (373)
T cd06453 89 DEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---VKEIGEIA 165 (373)
T ss_pred CEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---HHHHHHHH
Confidence 45666554332 223445678 9999998744333333 222 258899999999999999988 78899999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH---------
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN--------- 145 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~--------- 145 (272)
+++++++++|++|..... +..+..+. ..+++.|++|.++. .++|+++++++.+....+....
T Consensus 166 ~~~~~~li~D~a~~~~~~---~~~~~~~~----~d~~~~s~~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 236 (373)
T cd06453 166 HEAGVPVLVDGAQSAGHM---PVDVQDLG----CDFLAFSGHKMLGP--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSF 236 (373)
T ss_pred HHcCCEEEEEhhhhcCce---eeeccccC----CCEEEeccccccCC--CCcEEEEEchHHhhcCCCeecCCCccccccc
Confidence 999999999999874221 11222221 12777899999984 5589999988774322110000
Q ss_pred ---HHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC--CceEEEeecCC
Q 036024 146 ---DFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI--NAPYVWAHFPG 218 (272)
Q Consensus 146 ---~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~~~~~~i~l~~ 218 (272)
.+... ......+++.....++.+.+........++++++.+++++++++.|.++ ++++..+. .+.++++.+++
T Consensus 237 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (373)
T cd06453 237 EETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEG 316 (373)
T ss_pred cccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECC
Confidence 00000 0011123444444444444442222344778888889999999999988 68876432 35677788876
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEcc--CCHHHHHHHHHHH
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISGF--GHRESILEASRRL 268 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~~--~~~~~i~~~l~~l 268 (272)
.+..++...|.+ +||.+.+|..|.. ...+++|+|+. +|++|++++++.|
T Consensus 317 ~~~~~i~~~l~~-~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 317 IHPHDVATILDQ-YGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred cCHHHHHHHHHH-CCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 555666666654 5999988876532 23578999974 6999999998764
No 152
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=3.4e-21 Score=166.56 Aligned_cols=204 Identities=14% Similarity=0.143 Sum_probs=148.1
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++..+++++|.. .+++.+++|.++|++|++++|+||+|.++...+.+.+.......++ +.++||.++ +
T Consensus 166 ~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l~-~ 240 (377)
T PRK02936 166 EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD----IVTVAKGLG-N 240 (377)
T ss_pred CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc----EEEEccccc-C
Confidence 568888888889999887 5789999999999999999999999988766554333222322233 237999999 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--G 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g 200 (272)
|+|+||++++++. .+.+.......+.+.+++.|.++.++++.... ++..++++++.+++++.|++. +
T Consensus 241 G~~ig~v~~~~~~--------~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 309 (377)
T PRK02936 241 GIPVGAMIGKKEL--------GTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEH 309 (377)
T ss_pred CCccEEEEEcHHH--------HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998877 44444333444556889999999999874322 344566777777777777663 2
Q ss_pred CeE---ecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 201 IKV---YGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 201 ~~~---~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+.. .. ..|.++|+.++.. ...+.. .+.+.||.+.|+. .+++|+++ ..+++++++++++|+++|
T Consensus 310 ~~~~~~v~-~~g~~~~i~~~~~-~~~~~~-~l~~~gv~v~~~g------~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 310 LECVKNIR-GKGLMIGIECTEE-VAPVIE-QLREEGLLVLSAG------PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred CCcEEeEe-ecceEEEEEecch-HHHHHH-HHHHCCeEEecCC------CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 222 22 2578999999752 444444 4555699998743 57899994 668999999999999875
No 153
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.88 E-value=3.3e-21 Score=166.76 Aligned_cols=237 Identities=17% Similarity=0.148 Sum_probs=158.2
Q ss_pred Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 18 EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 18 ~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
.++..| +++.+|.++++...++ +++ .++++++++++++||||.+++ +++|.++|+++|+++++|++++. +
T Consensus 105 ~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~~~~~---g 178 (379)
T TIGR03402 105 HLEKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IEEIGEIAKERGALFHTDAVQAV---G 178 (379)
T ss_pred HHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HHHHHHHHHHcCCEEEEECcccc---c
Confidence 344568 9999998755333333 222 268899999999999999998 67899999999999999999974 2
Q ss_pred CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE 173 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 173 (272)
..+..+..+.. -+++.|.+|.+|.+| +|+++++++.... +........ ......+++.....++.+.++.
T Consensus 179 ~~~~~~~~~~~----D~~~~s~~K~~gp~G--~g~l~v~~~~~~~--p~~~g~~~~-~~~~~gt~~~~~~~~l~~al~~- 248 (379)
T TIGR03402 179 KIPIDLKEMNI----DMLSLSGHKLHGPKG--VGALYIRKGTRFR--PLLRGGHQE-RGRRAGTENVPGIVGLGKAAEL- 248 (379)
T ss_pred ccccCcccCCC----CEEEEcHHHcCCCCc--eEEEEECCCCCCC--CcccCCccC-CCcCCCCccHHHHHHHHHHHHH-
Confidence 22233333221 277888899777666 7888887654211 111000000 0112334566666655555552
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCC---ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCC--
Q 036024 174 GLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGIN---APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGG-- 246 (272)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~-- 246 (272)
..+++++..++++++++++++.|++ + ++.+.++.. +..+.+.++..+..++...| +++||.+.+|..|....
T Consensus 249 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~ 327 (379)
T TIGR03402 249 ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLL-DMEGICASSGSACTSGSLE 327 (379)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhh-ccCCEEEEchhhcCCCCCC
Confidence 2345677888999999999999985 5 777776432 22344444554566666554 66699999998886431
Q ss_pred ---------------CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 247 ---------------EEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 247 ---------------~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
.+.+|+|+ ++|++|++++++.|+++
T Consensus 328 ~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~ 369 (379)
T TIGR03402 328 PSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPI 369 (379)
T ss_pred cCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 36899996 57999999999999875
No 154
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=2.8e-21 Score=164.71 Aligned_cols=238 Identities=16% Similarity=0.043 Sum_probs=157.2
Q ss_pred cccccccCcccch-H---Hhcccc-eeEEeecCCCCCcccCCCC----C--------CCceEEEEecCCCccccCCCHHH
Q 036024 4 DSSVIVGQAGDLE-D---EVGKYC-NIEYLECGPGNNFFPDLKG----T--------SRTDIIFFCSPNNPTGHAATQNQ 66 (272)
Q Consensus 4 d~~~~~~~~~~~~-~---~~~~~g-~~~~~~~~~~~~~~~dl~~----~--------~~~~~i~~~~p~nptG~~~~~~~ 66 (272)
|.|++..+++.+. . .....| +++.++.+. +.+|+++ . ++++++++++|||| |.+++.++
T Consensus 72 d~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~ 147 (338)
T cd06502 72 GSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDE 147 (338)
T ss_pred CeEEEecCcceeeecCCcHHHHcCceEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHH
Confidence 5677666665422 1 223367 888888753 3344322 1 26899999999998 66779999
Q ss_pred HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeE-EEecccccccCCcchHH
Q 036024 67 LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGW-TVVPEELLFSSGFPVIN 145 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~-~~~~~~~~~~~~~~~~~ 145 (272)
+++|+++|+++|+++++|++|..+.......++.......+ +++.|+||.+|++| |+ ++.+++. ++
T Consensus 148 l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~~~~~~---g~~~~~~~~~--------~~ 214 (338)
T cd06502 148 LKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD--SVSFCLSKGGGAPV---GAVVVGNRDF--------IA 214 (338)
T ss_pred HHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC--EEEEeccccCCCcc---ceEEECCHHH--------HH
Confidence 99999999999999999999864322111123333322223 56889999999877 55 4456666 45
Q ss_pred HHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHH
Q 036024 146 DFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWD 223 (272)
Q Consensus 146 ~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~ 223 (272)
.+...... ...+.+.+.+.++...++...+ .+..+++.++++++.+.|+++|+.+.++ .+.++.+.++.. ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~v~~~~~--~~ 288 (338)
T cd06502 215 RARRRRKQAGGGMRQSGFLAAAGLAALENDLW---LRRLRHDHEMARRLAEALEELGGLESEV-QTNIVLLDPVEA--NA 288 (338)
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHhcCchH---HHHHHHHHHHHHHHHHHHHhcCCCcccc-cCCeEEEecCCc--cH
Confidence 55444322 2223556677777777764322 4556788888999999999988766554 566777777531 22
Q ss_pred HHHHHHH------hcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024 224 VFAEILE------KTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEA 270 (272)
Q Consensus 224 ~~~~ll~------~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~ 270 (272)
...++.+ ++|+.+.+.. .+++|++. ..++++++++++++++
T Consensus 289 ~~~~l~~~l~~~~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 289 VFVELSKEAIERRGEGVLFYAWG------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHHHhhhCCEEEEecC------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 3333332 4599987642 27899986 4589999999999875
No 155
>PRK07179 hypothetical protein; Provisional
Probab=99.88 E-value=1.8e-21 Score=169.86 Aligned_cols=209 Identities=18% Similarity=0.150 Sum_probs=138.4
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCC-CceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAR-EVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~g~~g 123 (272)
++++|++++++||||.+.+ +++|.++|+++|+++|+||+|....++..+.++....+.. ...+++.|+||.+| +
T Consensus 181 ~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~- 255 (407)
T PRK07179 181 GPGIIVVDSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-G- 255 (407)
T ss_pred CCeEEEECCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-c-
Confidence 4678888899999999988 7889999999999999999998654443333322221221 22388999999997 2
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 201 (272)
|+||+++++++ ++.+...... ...+.+.....++.+.++.. ...++.+++++++++++++.|.++|+
T Consensus 256 -~~G~l~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~g~ 324 (407)
T PRK07179 256 -RAGIITCPREL--------AEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSELGY 324 (407)
T ss_pred -cCeEEEeCHHH--------HHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 58999998776 3444322221 12222333333333444321 22256788999999999999999888
Q ss_pred eEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCC-CCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 202 KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGF-GPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 202 ~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
++.+ .+.++++.++.....+.+.+.++++||.+..-... .+.+.+.+||++. .|++|+++++++|+++
T Consensus 325 ~v~~--~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~ 395 (407)
T PRK07179 325 NIRS--ESQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREA 395 (407)
T ss_pred CCCC--CCCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 7763 46788888764223344444455569984311100 1223578999974 4999999999999875
No 156
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=2.5e-20 Score=161.01 Aligned_cols=207 Identities=14% Similarity=0.116 Sum_probs=148.6
Q ss_pred CCceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++..++|++|...+ .+.++++.++|+++|+++|+||+|.++...+...+.......+| +.||||.++ +
T Consensus 164 ~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~ 238 (375)
T PRK04260 164 KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD----IFTLAKGLA-N 238 (375)
T ss_pred CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC----EEEeccccc-C
Confidence 46677888899999998754 57799999999999999999999987655443222222222334 338999998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLG- 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g- 200 (272)
|+|+||++++++. .+.+.......+.+.+++.+.++.+++..... +..++.++..+..++.+.+.+.+.+
T Consensus 239 G~~ig~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 310 (375)
T PRK04260 239 GVPVGAMLAKSSL--------GGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKET 310 (375)
T ss_pred CcceEEEEEcHHH--------HhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999999999877 44444333444555788899989998874332 4556666666666677777666654
Q ss_pred CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 201 IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 201 ~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+.... ..|.++|++++. ...++..++.++ ||.+.|+ +.+.+|++. ..+++++++++++|++++
T Consensus 311 ~~~~~-~~g~~~~~~~~~-~~~~~~~~l~~~-Gi~v~~~------~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 311 VTTVR-GLGYMIGIETTA-DLSQLVEAARDK-GLIVLTA------GTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred eeEEe-ccceEEEEEecC-cHHHHHHHHHhC-CCEEecC------CCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 23333 378999999843 445666666555 9999764 247799996 348999999999998864
No 157
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.87 E-value=4.9e-20 Score=159.32 Aligned_cols=242 Identities=21% Similarity=0.159 Sum_probs=160.2
Q ss_pred Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 18 EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 18 ~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
.++..| +++.++.+.+....++ +++ .++++++++++|+||||.+++ +++|.++|+++|+++|+|++++....
T Consensus 106 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~~~i~~l~~~~~~~livD~a~~~g~~- 181 (376)
T TIGR01977 106 LKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILP---IEEIGELAQENGIFFILDAAQTAGVI- 181 (376)
T ss_pred HHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC---HHHHHHHHHHcCCEEEEEhhhccCcc-
Confidence 445568 9999988754323222 222 267899999999999999998 77889999999999999999975322
Q ss_pred CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH----H-HHH---hh-hhhccCCcchHHHH
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI----N-DFN---RI-ICTCFNGASNIAQA 164 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~----~-~~~---~~-~~~~~~~~~~~~~~ 164 (272)
+..+... +.-+++.|.+|.++.|. ..|.++.+++.........- . .+. .. ......+.+.....
T Consensus 182 --~~~~~~~----~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~ 254 (376)
T TIGR01977 182 --PIDMTEL----AIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIA 254 (376)
T ss_pred --CCCchhc----CCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHH
Confidence 1122222 12288899999875442 25777666654211111000 0 000 00 00112235555555
Q ss_pred HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC----CceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024 165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI----NAPYVWAHFPGRKSWDVFAEILEKTHITTVPG 239 (272)
Q Consensus 165 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g 239 (272)
++.+.++.......++++++.+++++++++.|.+. |+++..+. .+..+++.+++.+..++...|.+++||.+.+|
T Consensus 255 a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g 334 (376)
T TIGR01977 255 GLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTG 334 (376)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcc
Confidence 55555553333445778889999999999999876 78877642 25678888877666677777766669999998
Q ss_pred CCCCC--------CCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024 240 SGFGP--------GGEEYIRISG--FGHRESILEASRRLEA 270 (272)
Q Consensus 240 ~~~~~--------~~~~~~R~s~--~~~~~~i~~~l~~l~~ 270 (272)
..|++ ...+.+|+++ .+|++|+++++++|++
T Consensus 335 ~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 335 LHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred cccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 77642 2457899995 5699999999999976
No 158
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.86 E-value=3.3e-20 Score=162.46 Aligned_cols=210 Identities=14% Similarity=0.073 Sum_probs=146.9
Q ss_pred CCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
.++.++++. ..+|+++..++++.+++|.++|+++++++|+||+|.++...+...+.... +.+..+.||||.++ +
T Consensus 198 ~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~----~~~pdi~s~sK~l~-~ 272 (425)
T PRK08088 198 EDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQM----GVAADLTTFAKSIA-G 272 (425)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhc----CCCCCEEEEecccc-C
Confidence 455666665 44888888889999999999999999999999999976554432222122 12344789999998 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGI 201 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~ 201 (272)
|+|+||+++++++ .+.+.......+.+.+++.|.++.++++.... +++++.++..+...+.+.+.+...+.
T Consensus 273 G~rig~v~~~~~~--------~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 344 (425)
T PRK08088 273 GFPLAGVTGRAEV--------MDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPE 344 (425)
T ss_pred CCcceeeEecHHH--------HhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999888 44444445556666899999999999985433 45555555555555555554444442
Q ss_pred -eEecCCCceEEEeecCC-C--------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHH
Q 036024 202 -KVYGGINAPYVWAHFPG-R--------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLE 269 (272)
Q Consensus 202 -~~~~~~~~~~~~i~l~~-~--------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~ 269 (272)
....+ .|.++|+.+.. . ...++...++++ ||.+.|+..+ .+.+|+++. .+++++++++++|+
T Consensus 345 ~~~v~g-~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~-Gv~~~~~~~~----~~~iRl~~~~~~t~~ei~~~i~~l~ 418 (425)
T PRK08088 345 IGDVRG-LGAMIAIELFEDGDHSKPNAKLTAQIVARARDK-GLILLSCGPY----YNVLRILVPLTIEDAQIRQGLEIIA 418 (425)
T ss_pred eEEEec-cceEEEEEEecCCCCCCCCHHHHHHHHHHHHhC-CCEEecCCCC----CCEEEEECCCCcCHHHHHHHHHHHH
Confidence 22222 38899999831 1 134555555555 9988876544 368999975 47999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
+++
T Consensus 419 ~~l 421 (425)
T PRK08088 419 QCF 421 (425)
T ss_pred HHH
Confidence 864
No 159
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.86 E-value=1.9e-20 Score=163.21 Aligned_cols=206 Identities=13% Similarity=0.116 Sum_probs=140.2
Q ss_pred CCceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++..++||||.+++ .+.+++|.++|++||+++|+||+|.++...+...........++ + .++||.++.+
T Consensus 177 ~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd--~--~~~sK~l~~g 252 (400)
T PTZ00125 177 PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPD--I--VLLGKALSGG 252 (400)
T ss_pred CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCC--E--EEEcccccCC
Confidence 57889988888999999986 45699999999999999999999987655443222211211223 2 2478999843
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
++|+||++++++. .+.+.......+.+.+++.+.++.+.++.... +...++.+++.+++++.|+++
T Consensus 253 ~~~ig~v~~~~~~--------~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~---~~~~~~~~~~~~~l~~~l~~l~~~ 321 (400)
T PTZ00125 253 LYPISAVLANDDV--------MLVIKPGEHGSTYGGNPLACAVAVEALEVLKE---EKLAENAQRLGEVFRDGLKELLKK 321 (400)
T ss_pred CcCcEEEEEcHHH--------HhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhc
Confidence 3599999999887 44443333334455778888888777653221 123445555666666666553
Q ss_pred -CC-eEecCCCceEEEeecCC---CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 200 -GI-KVYGGINAPYVWAHFPG---RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 200 -g~-~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
++ ....+ .|.++++.++. ....++...++++ ||.+.|+. .+++|++. ..+++++++++++|++++
T Consensus 322 ~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~~~~~i~~~l~~l~~~l 393 (400)
T PTZ00125 322 SPWVKEIRG-KGLLNAIVFDHSDGVNAWDLCLKLKEN-GLLAKPTH------DNIIRFAPPLVITKEQLDQALEIIKKVL 393 (400)
T ss_pred CCCeEEEec-ccEEEEEEEccCcchHHHHHHHHHHHC-CeEEeecC------CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 32 22333 67788887763 2345666777655 99998753 57899994 579999999999998753
No 160
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.4e-19 Score=150.71 Aligned_cols=253 Identities=19% Similarity=0.232 Sum_probs=194.4
Q ss_pred cccccCccc-chHHhcccc-eeEEeecCCCCCcccC-----CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-----LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-----l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|+..+.|+. |.+.++++| +++.+...+...+.++ +++.++++++.++|...+||+..| +++|+++|++|+
T Consensus 85 v~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g 161 (383)
T COG0075 85 VVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHG 161 (383)
T ss_pred EEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHcC
Confidence 455667888 889999999 9999999988777777 555688999999999999999966 999999999999
Q ss_pred CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCC--------cchHHHHHh
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSG--------FPVINDFNR 149 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~--------~~~~~~~~~ 149 (272)
+++|+|.+-+. ++.+..+.++..+ +++++..|.+++ || +|.+..+++...... ..+...+..
T Consensus 162 ~l~iVDaVsS~---Gg~~~~vd~wgiD----v~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~ 232 (383)
T COG0075 162 ALLIVDAVSSL---GGEPLKVDEWGID----VAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKY 232 (383)
T ss_pred CEEEEEecccC---CCcccchhhcCcc----EEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHH
Confidence 99999999763 5556667777543 888888999974 56 688888776542111 111222222
Q ss_pred hh--hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecC-CCChHH
Q 036024 150 II--CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFP-GRKSWD 223 (272)
Q Consensus 150 ~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~-~~~~~~ 223 (272)
.. ..++++++....+++.++++....+.++.+.++++++.+.+++.+.++|++..... ......+.+| +.++.+
T Consensus 233 ~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~~~ 312 (383)
T COG0075 233 MEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDDKK 312 (383)
T ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCcHH
Confidence 21 35667788888999999998777778999999999999999999999999987722 2234556666 455556
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 224 VFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
....+++++|+.+.+|. ++.....+||+. ..+..++..++.+|..+|
T Consensus 313 ~~~~~~~~~g~~i~gg~--~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L 361 (383)
T COG0075 313 VRRALLKEYGVEIAGGQ--GPLKGKIFRIGHMGNVRPEDVLAALAALEAAL 361 (383)
T ss_pred HHHHHHHhCCEEecccc--cccCccEEEEecCccCCHHHHHHHHHHHHHHH
Confidence 66689999999997765 555567899994 347889999999988764
No 161
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.85 E-value=1.8e-19 Score=155.51 Aligned_cols=247 Identities=18% Similarity=0.139 Sum_probs=160.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..+... +...++..| +++.+|.+++....++ +++ .++++++++++++||||.+.+ +++|.++|+++|
T Consensus 105 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g 181 (371)
T PRK13520 105 PNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALENG 181 (371)
T ss_pred ceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHcC
Confidence 45555543332 666677788 9999988654333333 222 156777888889999999987 889999999999
Q ss_pred CEEEEcccCCccccC--CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh----
Q 036024 79 SIIIFDSAYAAYVTD--GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC---- 152 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---- 152 (272)
+++++|++|..+..+ .....+ ... ......+..|.+| |+.+|.++|+++..++.+ .+.+.....
T Consensus 182 ~~livD~a~~~~~~~~~~~~~~~-~~~-~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~-------~~~l~~~~~~~~~ 251 (371)
T PRK13520 182 IFLHVDAAFGGFVIPFLDDPPNF-DFS-LPGVDSITIDPHK-MGLAPIPAGGILFRDESY-------LDALAVDTPYLTS 251 (371)
T ss_pred CCEEEEecchhHHHHhhcCCCCc-ccc-CCCCceEEECCcc-ccCccCCceEEEEcCHHH-------HHhhcccCccccC
Confidence 999999999865422 111111 110 1111255567788 445678899888655431 222210000
Q ss_pred ----hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EecCCCceEEEeecCCCChHHHHHH
Q 036024 153 ----TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK-VYGGINAPYVWAHFPGRKSWDVFAE 227 (272)
Q Consensus 153 ----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~i~l~~~~~~~~~~~ 227 (272)
....+.+.....++...+........++.+++..++++++.+.|+++|++ +..+ ...++.+.++ +..++...
T Consensus 252 ~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v~~~~~--~~~~v~~~ 328 (371)
T PRK13520 252 KKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEP-VLNIVAFDDP--NPDEVREK 328 (371)
T ss_pred CCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CceEEEEecC--CHHHHHHH
Confidence 00111233445555555554334556788899999999999999988988 4444 4567777776 45566666
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
|.++ ||.+.++. ..+.+|+|+ .++++|++++++.|++++
T Consensus 329 L~~~-gi~v~~~~-----~~~~iRis~~~~~t~edi~~~~~~l~~~~ 369 (371)
T PRK13520 329 LRER-GWRVSVTR-----CPEALRIVCMPHVTREHIENFLEDLKEVK 369 (371)
T ss_pred HHHC-CceeccCC-----CCCEEEEEEECCCCHHHHHHHHHHHHHHh
Confidence 6655 99997643 246799986 368999999999998764
No 162
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.85 E-value=8.6e-20 Score=159.00 Aligned_cols=205 Identities=14% Similarity=0.122 Sum_probs=145.7
Q ss_pred CCceEEEEecCCCccccCC--CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA--TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++++|++ .|.||+|.+. +++.+++|.++|++||+++|+||+|.++...+...........+| +.|+||.+|
T Consensus 182 ~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD----i~t~sK~l~- 255 (406)
T PRK12381 182 DQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----VLTTAKALG- 255 (406)
T ss_pred CCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC----EEEehhhhh-
Confidence 35666666 7999998765 689999999999999999999999987765554322222222333 358999998
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG- 200 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 200 (272)
+|+|+||+++++++ .+.+.......+++.+++.+.++.+.++.... .+.+++++++.+++++.|++++
T Consensus 256 gG~~ig~~~~~~~~--------~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~ 324 (406)
T PRK12381 256 GGFPIGAMLTTEKC--------ASVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINA 324 (406)
T ss_pred CCCceEEEEEcHHH--------HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999887 44454434445556788888888887763221 4577889999999999998763
Q ss_pred -CeE-e-cCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 201 -IKV-Y-GGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 201 -~~~-~-~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
..+ . ....|.++++.++.. ....+.. .+.++||.+.+. +++.+|+++ ..+++++++++++|++++
T Consensus 325 ~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~-~l~~~Gv~v~~~------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l 397 (406)
T PRK12381 325 RYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQ-EAAKAGVMVLIA------GPNVVRFAPALNISEEEITTGLDRFARAC 397 (406)
T ss_pred hCCCEEEEecCeEEEEEEecCchhhHHHHHHH-HHHHCCcEEeeC------CCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence 221 1 123578888888642 2234444 445559999753 246899985 368999999999998764
No 163
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.85 E-value=8.2e-20 Score=158.43 Aligned_cols=251 Identities=16% Similarity=0.142 Sum_probs=163.2
Q ss_pred cccccccC-cccchHHhcccc-eeEEeecCCCCC------cc--cCCCCC-----C----CceEEEEecCCCcc-ccCCC
Q 036024 4 DSSVIVGQ-AGDLEDEVGKYC-NIEYLECGPGNN------FF--PDLKGT-----S----RTDIIFFCSPNNPT-GHAAT 63 (272)
Q Consensus 4 d~~~~~~~-~~~~~~~~~~~g-~~~~~~~~~~~~------~~--~dl~~~-----~----~~~~i~~~~p~npt-G~~~~ 63 (272)
|.| +.++ |..+.......| +.+.++++++.+ |. +|++++ + ++++|++++||||+ |+.++
T Consensus 93 D~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s 171 (431)
T cd00617 93 RTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVS 171 (431)
T ss_pred CEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCC
Confidence 444 3343 444777778888 999999986533 43 664431 2 37889999999998 99999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCcc--cc-----CC-CCCCccccCCCCCceEEEecCccccCCCccc------eeEE
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAY--VT-----DG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVR------LGWT 129 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~--~~-----~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r------~G~~ 129 (272)
.+++++|.++|++||+++|+|+++... .+ ++ ...++.+ .++.++|+||.+.++|+| .||+
T Consensus 172 ~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e------i~~e~~s~sd~~~mS~~K~~~~~~GG~i 245 (431)
T cd00617 172 MANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE------IAREMFSYADGCTMSAKKDGLVNIGGFL 245 (431)
T ss_pred HHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH------HHHHhhccCCEEEEEeecCCCCccceEE
Confidence 999999999999999999999996521 11 11 1223322 224455666666666665 5799
Q ss_pred EecccccccCCcchHHHHHhhh----hh-ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe
Q 036024 130 VVPEELLFSSGFPVINDFNRII----CT-CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY 204 (272)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 204 (272)
+++++.+ .+.+.... .. ...+.+.....|+...+.+... .+.+.+.++ +++++.+.|.+.|+.+.
T Consensus 246 ~~~d~~l-------~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~-~r~~l~~~L~~~G~~v~ 315 (431)
T cd00617 246 ALRDDEL-------YEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRVE-QVRYLGDRLDEAGVPIV 315 (431)
T ss_pred EeCcHHH-------HHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHHH-HHHHHHHHHHHCCCCcc
Confidence 9987531 34443221 11 1122333333443334442111 122333333 55999999999999999
Q ss_pred cCCCceEEEeecCC---------CChHHHHHHHHHhcCeEeeC-CCCC---CCC-------CCCeEEEEcc---CCHHHH
Q 036024 205 GGINAPYVWAHFPG---------RKSWDVFAEILEKTHITTVP-GSGF---GPG-------GEEYIRISGF---GHRESI 261 (272)
Q Consensus 205 ~~~~~~~~~i~l~~---------~~~~~~~~~ll~~~gi~v~~-g~~~---~~~-------~~~~~R~s~~---~~~~~i 261 (272)
.|.+++++|++++. .++..++.+|+++.||.+.- |+.. .+. ....+|+++- -|.+++
T Consensus 316 ~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~ 395 (431)
T cd00617 316 EPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHM 395 (431)
T ss_pred CCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHH
Confidence 99999999999862 14678888999999999643 4421 121 1368999962 278888
Q ss_pred HHHHHHHHHh
Q 036024 262 LEASRRLEAL 271 (272)
Q Consensus 262 ~~~l~~l~~~ 271 (272)
+...++|..+
T Consensus 396 ~~~~~~~~~~ 405 (431)
T cd00617 396 DYVAAAVIAL 405 (431)
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 164
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.85 E-value=1.5e-19 Score=158.21 Aligned_cols=205 Identities=18% Similarity=0.174 Sum_probs=140.9
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
+++++++...+|++|..+ +++.+++|.++|+++++++|+||+|.++...+...........++ +.|+||.++ +|
T Consensus 191 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d----~~t~sK~l~-~g 265 (413)
T cd00610 191 EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPD----IVTLGKGLG-GG 265 (413)
T ss_pred CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCC----eEEEccccc-Cc
Confidence 455555555577889876 677799999999999999999999987643332222222221222 458899998 68
Q ss_pred cceeEEEecccccccCCcchHHHH--HhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDF--NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 199 (272)
+|+||++++++. ++.+ .......+.+.+++.+.++.+.++.... ++..++++++.+++++.|+++
T Consensus 266 ~~~g~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~ 334 (413)
T cd00610 266 LPLGAVLGREEI--------MDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAE 334 (413)
T ss_pred cccEEEEEcHHH--------HHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998777 4443 2333334555777888877777752221 346677888888888888765
Q ss_pred --CCeEecCCCceEEEeecCCC---------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHH
Q 036024 200 --GIKVYGGINAPYVWAHFPGR---------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASR 266 (272)
Q Consensus 200 --g~~~~~~~~~~~~~i~l~~~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~ 266 (272)
++.......|.++++.++.. ...++...+.++ ||.+.|+. .+.+|+++ ..++++++++++
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gv~v~~~~------~~~lR~~~~~~~t~~~i~~~~~ 407 (413)
T cd00610 335 KHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALER-GLLLRPSG------GNVIRLLPPLIITEEEIDEGLD 407 (413)
T ss_pred hCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHC-CeEEeecC------CCEEEEECCCcCCHHHHHHHHH
Confidence 22222234578888888642 334566666555 99999875 46799985 458999999999
Q ss_pred HHHHhC
Q 036024 267 RLEALF 272 (272)
Q Consensus 267 ~l~~~l 272 (272)
+|++++
T Consensus 408 ~l~~~l 413 (413)
T cd00610 408 ALDEAL 413 (413)
T ss_pred HHHHhC
Confidence 999875
No 165
>PRK07505 hypothetical protein; Provisional
Probab=99.84 E-value=1.6e-19 Score=157.26 Aligned_cols=210 Identities=15% Similarity=0.104 Sum_probs=134.6
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC--CCccccCC-CCCceEEEecCccccC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP--RSIYEIPG-AREVAIEISSFSKFSG 120 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~--~~~~~~~~-~~~~~i~~~s~sK~~g 120 (272)
++++++++++|+||||.+++ +++|.++|+++++++|+||+|+...++... ........ .++++++++|+||.+|
T Consensus 178 ~~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~ 254 (402)
T PRK07505 178 TNKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFG 254 (402)
T ss_pred cCCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhh
Confidence 45689999999999999988 788889999999999999999654333222 12223332 4678899999999999
Q ss_pred CCccceeEEEec-ccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024 121 FTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 121 ~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
.+| ||++++ ++. .+.+........+ +++.++..++.+.++....+++.+..+.++++.+.+.+.+.
T Consensus 255 ~~G---g~~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 323 (402)
T PRK07505 255 ASG---GVIMLGDAEQ--------IELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIP 323 (402)
T ss_pred ccC---eEEEeCCHHH--------HHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH
Confidence 666 887654 444 4555443332222 23446666666666522223344555666666665544432
Q ss_pred hCCCeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 198 SLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 198 ~~g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
.. . .....++.++.++.. ...++...|+++ ||.+.++..+. +.+..++|+++. .+++|+++++++|++++
T Consensus 324 ~~---~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l 397 (402)
T PRK07505 324 TE---Q-SGSFLPIRLIYIGDEDTAIKAAKQLLDR-GFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEIL 397 (402)
T ss_pred hc---C-CCCCCCEEEEEeCCHHHHHHHHHHHHHC-CCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHH
Confidence 21 1 111223334444421 345667777655 99999874332 223468999975 59999999999998763
No 166
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.84 E-value=3.2e-19 Score=154.06 Aligned_cols=243 Identities=18% Similarity=0.159 Sum_probs=157.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+... |...++..| +++.++.+++ +..|++. .+++..+++++|+||||.+.+ +++|.++|++
T Consensus 107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~ 181 (373)
T TIGR03812 107 PNIIVPESAHFSFEKAAEMLGLELRYAPLDED--YTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALE 181 (373)
T ss_pred cEEEECCcchHHHHHHHHHcCCeEEEEeeCCC--CCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHH
Confidence 45666553333 667777888 9999998744 4445333 145555555568999999976 8888999999
Q ss_pred cCCEEEEcccCCccccCC----CC-CCcc-ccCCCCCceEEEecCccccCCCccceeEEEe-cccccccCCcchHHHHHh
Q 036024 77 NGSIIIFDSAYAAYVTDG----CP-RSIY-EIPGAREVAIEISSFSKFSGFTGVRLGWTVV-PEELLFSSGFPVINDFNR 149 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~----~~-~~~~-~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~-~~~~~~~~~~~~~~~~~~ 149 (272)
+++++++|++|..+.... .. ..+. ...+. -.+..|.+| |++++.+.|+++. +++.+ +.+..
T Consensus 182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~---d~~~~s~~K-~~~~~~~~G~~~~~~~~~~--------~~l~~ 249 (373)
T TIGR03812 182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGV---QSITIDPHK-MGLSPIPAGGILFRSKSYL--------KYLSV 249 (373)
T ss_pred cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCC---CEEEECccc-cCCCcCCceEEEEeCHHHH--------hhhcc
Confidence 999999999998654210 00 0111 01111 145567889 6567778887664 44442 22211
Q ss_pred hhhh--------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCCh
Q 036024 150 IICT--------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKS 221 (272)
Q Consensus 150 ~~~~--------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~ 221 (272)
.... ...+.+.....++...++.......++..+++.++++++++.|+++|+....+...+++.+.+++ .
T Consensus 250 ~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~~--~ 327 (373)
T TIGR03812 250 DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPVLNIVAFEVDD--P 327 (373)
T ss_pred cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCceEEEEEeCC--H
Confidence 0000 00123345555566666644456678889999999999999999998764433356677777763 3
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
.++...|.++ ||.+.++. .++++|+++. ++++|++++++.|+++
T Consensus 328 ~~v~~~L~~~-gi~v~~~~-----~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 328 EEVRKKLRDR-GWYVSVTR-----CPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred HHHHHHHHHC-CceeccCC-----CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 4666666655 99997642 2568999964 6899999999999763
No 167
>PLN02242 methionine gamma-lyase
Probab=99.84 E-value=4.2e-19 Score=154.35 Aligned_cols=176 Identities=17% Similarity=0.175 Sum_probs=121.8
Q ss_pred cccccccCccc-chHHh-----cccc-eeEEeecCCCCCcccCCCC--CC-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEV-----GKYC-NIEYLECGPGNNFFPDLKG--TS-RTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~-----~~~g-~~~~~~~~~~~~~~~dl~~--~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+. +...+ +..| +++.++.+.... +++ .+ ++|+|++++|+||||.+.+ +++|+++
T Consensus 116 D~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~----l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~l 188 (418)
T PLN02242 116 GHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEA----VKKAVVPGKTKVLYFESISNPTLTVAD---IPELARI 188 (418)
T ss_pred CEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHH----HHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHH
Confidence 56666665544 33322 2356 666665531111 222 14 5899999999999999975 8999999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc-eeEEEecccccccCCcchHHHHHhhhh
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR-LGWTVVPEELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
|+++++++|+|++|..+.+.. ..+. ..++++|+||.++.+|.+ .||+++++++ ++.+.....
T Consensus 189 a~~~gi~livDea~~~~~~~~-----~~~g----~divv~S~SK~l~g~g~~~gG~iv~~~~l--------i~~l~~~~~ 251 (418)
T PLN02242 189 AHEKGVTVVVDNTFAPMVLSP-----ARLG----ADVVVHSISKFISGGADIIAGAVCGPAEL--------VNSMMDLHH 251 (418)
T ss_pred HHHhCCEEEEECCCCccCCCH-----HHcC----CcEEEEeCccccCCCCCceEEEEEcCHHH--------HHHHHHHhh
Confidence 999999999999998654321 1221 238999999999878877 5999988877 445554433
Q ss_pred --hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC
Q 036024 153 --TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG 206 (272)
Q Consensus 153 --~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 206 (272)
....+.+...|.|...+.... .+..+.++++++++.+.+.|+++++++..|
T Consensus 252 ~~~~~~g~~~~~~~A~l~~~~l~---tl~~r~~~~~~~a~~la~~L~~~~~~V~yP 304 (418)
T PLN02242 252 GALMLLGPTMNPKVAFELSERLP---HLSLRMKEHCRRAMEYAKRMKELGLKVIYP 304 (418)
T ss_pred hhhhccCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHhCCCEEECC
Confidence 223345666677666665432 446677899999999999999988777643
No 168
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.84 E-value=2.6e-19 Score=156.03 Aligned_cols=205 Identities=13% Similarity=0.111 Sum_probs=142.9
Q ss_pred CCceEEEEecCCCccccCCCH-HHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQ-NQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~-~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++|++.+|+||+|.++++ +.+++|.++|++||+++|+||+|.++...+...........+|.+ + ++|.++ .
T Consensus 186 ~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~--~--~~K~l~-g 260 (401)
T PRK00854 186 PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVT--L--IGKALS-G 260 (401)
T ss_pred CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEE--E--eccccc-C
Confidence 578999999999999999974 459999999999999999999998655444211111111123432 2 479997 5
Q ss_pred c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 201 (272)
| +|+||++++++. .+.+.........+.+++.+.++.+.++.... ....++++++.+++.+.|++++.
T Consensus 261 g~~~ig~v~~~~~~--------~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~~ 329 (401)
T PRK00854 261 GFYPVSAVLSNSEV--------LGVLKPGQHGSTFGGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIRS 329 (401)
T ss_pred CccCeEEEEEcHHH--------HhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhcc
Confidence 5 799999999887 33333223333445788888888888863221 33568888899999999988753
Q ss_pred eE---ecCCCceEEEeec-CC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 202 KV---YGGINAPYVWAHF-PG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 202 ~~---~~~~~~~~~~i~l-~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
.. ..+ .|.++.+.+ +. ....++...|+++ ||.+.+. +.+++|++. ..+++++++++++|++++
T Consensus 330 ~~~~~~~g-~g~~~~i~~~~~~~~~~~~~~~L~~~-GV~v~~~------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 330 NIVREVRG-RGLMLAVELEPEAGGARQYCEALKER-GLLAKDT------HDHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred CceEEEec-cceEEEEEEecCchhHHHHHHHHHHC-CeEEecC------CCCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 32 233 344444444 32 2456677777765 9999642 246899995 569999999999998864
No 169
>PLN00144 acetylornithine transaminase
Probab=99.84 E-value=2.9e-19 Score=154.22 Aligned_cols=203 Identities=15% Similarity=0.181 Sum_probs=135.7
Q ss_pred CCceEEEEecCCCccccCCCHHH--HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQ--LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~--l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
.+++++++...+|| |.+++++. +++|.++|++||+++|+||+|.++...+...+.....-.+| +.|+||.++
T Consensus 166 ~~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD----i~t~sK~l~- 239 (382)
T PLN00144 166 GKTAAVFVEPVQGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD----IMTLAKPLA- 239 (382)
T ss_pred CCeEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC----EEEeccccc-
Confidence 46777777745899 44444444 99999999999999999999998766654322111222344 678999998
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcc---cccH-HHHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLS---SEGL-EAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~~~~-~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
+|+|+||++++++. .+.+.......+.+.+++++.++.+.++ +... ++++++.+.+ .+.+.+.+.
T Consensus 240 ~G~pig~v~~~~~~--------~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l---~~~l~~~~~ 308 (382)
T PLN00144 240 GGLPIGAVLVTEKV--------ASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYL---RELLRRKLG 308 (382)
T ss_pred CCcceEEEEEcHHH--------HhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHH---HHHHHHHHh
Confidence 99999999999888 4444333344566688888888885554 2221 2333333333 233333444
Q ss_pred hCC-C-eEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 198 SLG-I-KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 198 ~~g-~-~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
+.+ + .+.+ .|.++|+.+.. ....+...+.+ +||.+.|+. . .+.+|++.. .+++++++++++|+++|
T Consensus 309 ~~~~~~~vrg--~G~~~~l~l~~-~~~~~~~~~~~-~Gv~i~~~~---~--~~~lrl~p~~~~~~~~i~~~~~~l~~~l 378 (382)
T PLN00144 309 GNPHVKEVRG--VGLLVGIQLDV-PAGPLVDACRD-SGLLVLTAG---K--GDVVRLVPPLVISEAELEQAVEILADCL 378 (382)
T ss_pred hCCCceeeec--CceEEEEEecC-ccHHHHHHHHH-CCeEEeecC---C--CCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 442 2 2333 78999999942 34566666655 499998762 1 378999963 57999999999998864
No 170
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.84 E-value=3.8e-19 Score=150.79 Aligned_cols=209 Identities=22% Similarity=0.215 Sum_probs=156.7
Q ss_pred ceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC--CCceEEEecCccccCCCc
Q 036024 46 TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA--REVAIEISSFSKFSGFTG 123 (272)
Q Consensus 46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g 123 (272)
.++|++...-...|.+-| +++|++++++|++++++||+|+..++++.+..+.+..+. .++.|.++|+||++|..|
T Consensus 172 ~~~IvtegVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G 248 (388)
T COG0156 172 RKLIVTEGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG 248 (388)
T ss_pred ceEEEEeccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC
Confidence 455665588888999876 999999999999999999999988888777766654433 244799999999999888
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 201 (272)
||+.++..+ .+.+.+......+ +.++....++.+.++.. +...+++++++++...+++.+...|+
T Consensus 249 ---g~v~g~~~~--------~d~L~~~ar~~ifStalpP~~aaa~~~al~~l--~~~~~~r~~L~~~~~~~~~~~~~~~~ 315 (388)
T COG0156 249 ---GYIAGSAAL--------IDYLRNRARPFIFSTALPPAVAAAALAALRIL--EEGPERRERLQELAAFFRSLLKALGL 315 (388)
T ss_pred ---ceeeCcHHH--------HHHHHHhCCceeccCCCCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999988 5666555433222 23333334445555422 23377889999999999988888888
Q ss_pred eEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 202 KVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 202 ~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
.+.+ ..++++.+.+.+ ....++...|+++ ||++.+..... |.+...+|+++. .++++|++++..|.++.
T Consensus 316 ~~~~-s~s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~~ 388 (388)
T COG0156 316 VLLP-SESPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEVG 388 (388)
T ss_pred ccCC-CCCCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhhC
Confidence 8755 467777777764 3456677777777 99998877665 567789999974 48999999999998753
No 171
>PRK07049 methionine gamma-lyase; Validated
Probab=99.83 E-value=4.6e-19 Score=154.63 Aligned_cols=174 Identities=13% Similarity=0.123 Sum_probs=123.9
Q ss_pred cccccccCccc-chHH----hcccc-eeEEeecCCCCCcccC--CCC---CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDE----VGKYC-NIEYLECGPGNNFFPD--LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~~~~~~~~~~~d--l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..|.+. +... +...| +++.++...+ -..++ ++. .+++|+|++++|+||||.+++.+++.+|++
T Consensus 123 d~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d-~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~ 201 (427)
T PRK07049 123 DVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLS-EAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVAD 201 (427)
T ss_pred CEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCC-HHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 66777776665 5444 34567 7777763221 11111 211 257999999999999999999888888888
Q ss_pred HHHH---cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHH
Q 036024 73 FARN---NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 73 ~~~~---~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~ 148 (272)
.|++ +++++|+|++|...... .++ .. +..+++.|+||.+| .+|+|+||+++++++ .+.+.
T Consensus 202 ~~~~~~~~~~~vvvDety~~~~~~---~pl-~~----g~divv~S~SK~~gG~~glr~G~vv~~~~l--------~~~l~ 265 (427)
T PRK07049 202 AIEARQGHRPIIACDNTLLGPVFQ---KPL-EH----GADLSVYSLTKYVGGHSDLVAGAVLGRKAL--------IRQVR 265 (427)
T ss_pred HhhhcccCCCEEEEECCccccccC---Ccc-cc----CCCEEEEcCceeecCCCCcEEEEEECCHHH--------HHHHH
Confidence 8654 68999999998753321 122 11 23488889999998 699999999988776 56666
Q ss_pred hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..+.......++..+.++.+.++ .+..+.++..++++.+.+.|+++
T Consensus 266 ~~~~~~g~~ls~~~a~l~~r~L~-----tl~~R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 266 ALRSAIGTQLDPHSCWMLGRSLE-----TLVLRMERANRNARAVAEFLRDH 311 (427)
T ss_pred HHHHhcCCCCCHHHHHHHHcCCC-----hHHHHHHHHHHHHHHHHHHHHhC
Confidence 66665566678888887777775 23555667799999999999987
No 172
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.83 E-value=5.1e-19 Score=154.47 Aligned_cols=207 Identities=13% Similarity=0.098 Sum_probs=141.8
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++...++|+|..+ +++.+++|.++|++|++++|+||++.++...+.......+...+| +.++||.++ +
T Consensus 197 ~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD----i~t~gK~l~-~ 271 (421)
T PRK09792 197 KQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD----LMTMAKSLA-G 271 (421)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc----EEEeehhhc-C
Confidence 4577787776699999876 889999999999999999999999998866665444444433444 568999998 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS---- 198 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 198 (272)
|+++||+++++++. +.+.......+++.+++++.|+.+.++.... .+..++.++..+++++.|+.
T Consensus 272 G~pigav~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~ 340 (421)
T PRK09792 272 GMPLSGVVGNANIM--------DAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK---ESLCERANQLGQRLKNTLIDAKES 340 (421)
T ss_pred CCceEEEEEcHHHH--------hccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988873 3333233445566888999977777763222 12333444444444444443
Q ss_pred CCCeEecCCC-ceEEEeecCCC--------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHH
Q 036024 199 LGIKVYGGIN-APYVWAHFPGR--------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRR 267 (272)
Q Consensus 199 ~g~~~~~~~~-~~~~~i~l~~~--------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~ 267 (272)
.+. +....+ |.++|+.+++. ....+...++++ ||.+.+... ..+.+||.. ..+++++++++++
T Consensus 341 ~p~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~-Gv~i~~~g~----~~~~irl~P~l~i~~~ei~~~~~~ 414 (421)
T PRK09792 341 VPA-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQ-GLLLLTCGA----YGNVIRFLYPLTIPDAQFDAAMKI 414 (421)
T ss_pred CCC-cceecccceEEEEEecCCccCCcchHHHHHHHHHHHHC-CcEEeecCC----CCCEEEEeCCCcCCHHHHHHHHHH
Confidence 342 222334 89999999632 123455556555 999964221 147899984 3689999999999
Q ss_pred HHHhC
Q 036024 268 LEALF 272 (272)
Q Consensus 268 l~~~l 272 (272)
|.+++
T Consensus 415 l~~~l 419 (421)
T PRK09792 415 LQDAL 419 (421)
T ss_pred HHHHH
Confidence 98864
No 173
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.83 E-value=5.5e-20 Score=157.21 Aligned_cols=219 Identities=15% Similarity=0.163 Sum_probs=148.0
Q ss_pred chHHhcccc-eeEEeecCCCCCcccC-CCC-C-C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T-S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~-~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D 84 (272)
+...+...| +++.+|.++++...++ +++ . + +++++++++|+||||.+.+ +++|+++|+++|+++++|
T Consensus 108 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~l~vD 184 (345)
T cd06450 108 VEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKYDLWLHVD 184 (345)
T ss_pred HHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHhCCeEEEe
Confidence 555666678 9999999866433333 222 1 3 6788888999999999855 899999999999999999
Q ss_pred ccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHH
Q 036024 85 SAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA 164 (272)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (272)
++|..+.......... .....+..++..|++|.++ ++.++|++..+ ...+.
T Consensus 185 ~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~---------------------------~~~~~ 235 (345)
T cd06450 185 AAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKYGL-VPLGCSAVLVR---------------------------ALKLW 235 (345)
T ss_pred chhhHHHhhChhhHHH-hcCccccCEEEEchhHhhC-CCcchHHHHHH---------------------------HHHHH
Confidence 9998766432111100 1111122366779999776 55678875544 23334
Q ss_pred HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC-----CChHHHHHHHHHhcCeEeeC
Q 036024 165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG-----RKSWDVFAEILEKTHITTVP 238 (272)
Q Consensus 165 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~-----~~~~~~~~~ll~~~gi~v~~ 238 (272)
++.+.+. ...++++.++..++++++.+.|.++ ++.+..+..+.++.+.++. ....++...|.++ |+.+.+
T Consensus 236 ~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~-g~~~~~ 311 (345)
T cd06450 236 ATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNER-GGWHVP 311 (345)
T ss_pred HHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhc-CCEEEE
Confidence 4444443 2445788889999999999999987 7877664455566666654 2345666666555 655555
Q ss_pred CCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 239 GSGFGPGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 239 g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
+..+. +..++|+++. ++++|++++++.|+++
T Consensus 312 ~~~~~--~~~~lRis~~~~~~t~~di~~l~~~l~~~ 345 (345)
T cd06450 312 ATTLG--GPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred eeEEC--CeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 44332 4678999973 3899999999999864
No 174
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.83 E-value=4.2e-19 Score=154.68 Aligned_cols=249 Identities=12% Similarity=0.107 Sum_probs=153.5
Q ss_pred cccccccCccc-chHHhcc----cc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGK----YC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~----~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..++++ +...... .| +++.++.+++....++ +++ .++++++++++|+ |||.+. +.+++|+++|
T Consensus 109 d~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~--~~l~~i~~la 185 (398)
T cd00613 109 NKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFE--DLIKEIADIA 185 (398)
T ss_pred CEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceec--chHHHHHHHH
Confidence 56777666555 5444433 33 7778887644222222 222 2678999999986 899984 3469999999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcchHH-----
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPVIN----- 145 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~~~----- 145 (272)
+++|+++|+|++|.... . ......+ +..++++|++|.+ .| |++.||++.+++...........
T Consensus 186 ~~~g~~livD~~~~~~~-~--~~~~~~~----~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T cd00613 186 HSAGALVYVDGDNLNLT-G--LKPPGEY----GADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDA 257 (398)
T ss_pred HhcCCEEEEEecccccc-C--CCChHHc----CCCEEEeeccccC-CCCCCCCCceeEEEEhhhhHhhCCCCeecccccc
Confidence 99999999999876422 1 1111122 2338999999988 35 78899999988764321000000
Q ss_pred ----H----------HHhh--hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc
Q 036024 146 ----D----------FNRI--ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA 209 (272)
Q Consensus 146 ----~----------~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 209 (272)
. ..++ ......+.+.....++...+........++.+++++++++++++.|++++... .+.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~ 336 (398)
T cd00613 258 EGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNGP 336 (398)
T ss_pred CCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCC
Confidence 0 0000 00111222333333333333334445678889999999999999999985443 22222
Q ss_pred --eEEEeecCC---CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHH
Q 036024 210 --PYVWAHFPG---RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRL 268 (272)
Q Consensus 210 --~~~~i~l~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l 268 (272)
..+++.++. .+..++...|+++ ||.+.... +.+.+.+|++. +++++|++++++.|
T Consensus 337 ~~~~v~~~~~~~~~~~~~~~~~~L~~~-gi~~~~~~---~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 337 FFHEFVLRLPPLYGIRAEDLAKALIDG-GFHAPTMY---LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred eeEEEEEEcCCcchHHHHHHHHhhhhc-Cccccccc---cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 235677763 2355667777655 98764321 23457899995 67999999998764
No 175
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=1.8e-18 Score=151.50 Aligned_cols=247 Identities=17% Similarity=0.172 Sum_probs=153.4
Q ss_pred cccccccCccc-ch-----HHhcccc-eeEEeecCCCCCcccCCCC----C--CCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LE-----DEVGKYC-NIEYLECGPGNNFFPDLKG----T--SRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~-----~~~~~~g-~~~~~~~~~~~~~~~dl~~----~--~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..+.+. +. ..+...| +++.++.+.+ .+.+|++. . ++++++++++++|| ...+ +++|
T Consensus 112 d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~~~~~~~~--~~~~---~~~I 185 (416)
T PRK00011 112 DTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEE-TGLIDYDEVEKLALEHKPKLIIAGASAYS--RPID---FKRF 185 (416)
T ss_pred CEEEEeccccCCccccccccccccceeeEeecCcCcc-cCCcCHHHHHHHHHhcCCCEEEECCCcCC--CccC---HHHH
Confidence 56666655433 21 1123445 7777877643 34555333 1 37889988766655 3334 8999
Q ss_pred HHHHHHcCCEEEEcccCCc-cccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHH
Q 036024 71 VEFARNNGSIIIFDSAYAA-YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFN 148 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~ 148 (272)
.++|+++|+++|+|++|.. ....+....... ...++++|+||.+ +|.|.||+++++ +. .+.+.
T Consensus 186 ~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----~~di~~~S~~K~l--~g~~gg~i~~~~~~~--------~~~l~ 250 (416)
T PRK00011 186 REIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----HADVVTTTTHKTL--RGPRGGLILTNDEEL--------AKKIN 250 (416)
T ss_pred HHHHHHcCCEEEEECcchhcccccCccCCCCC-----CCcEEEecCCcCC--CCCCceEEEeCCHHH--------HHHHH
Confidence 9999999999999999863 222221111111 1127899999976 567889999975 44 45554
Q ss_pred hhhhhccCCcc-hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCC--ChHHH
Q 036024 149 RIICTCFNGAS-NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGR--KSWDV 224 (272)
Q Consensus 149 ~~~~~~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~--~~~~~ 224 (272)
........+.+ ...+.++...+.....+++++..++++++++++++.|++.|+++.. ...++++|+.+++. +..+
T Consensus 251 ~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~- 329 (416)
T PRK00011 251 SAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVSGGTDNHLVLVDLRSKGLTGKE- 329 (416)
T ss_pred HHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeeecCCCCeEEEEeCcccCCCHHH-
Confidence 44433222222 2233332223322222456888899999999999999999988764 22458899998632 3445
Q ss_pred HHHHHHhcCeEeeCCC-CC---CCCCCCeEEEEc------cCCHHHHHHHHHHHHHhC
Q 036024 225 FAEILEKTHITTVPGS-GF---GPGGEEYIRISG------FGHRESILEASRRLEALF 272 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~-~~---~~~~~~~~R~s~------~~~~~~i~~~l~~l~~~l 272 (272)
+.+.++++||.+..+. .+ .+..+..+|++. ..+++|++++++.|++++
T Consensus 330 ~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~ 387 (416)
T PRK00011 330 AEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVL 387 (416)
T ss_pred HHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence 4445566699997432 11 122345699963 236899999999998753
No 176
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.83 E-value=5.3e-19 Score=156.16 Aligned_cols=251 Identities=16% Similarity=0.189 Sum_probs=157.5
Q ss_pred cccccccCccc-chHHhc----ccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVG----KYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~----~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. +...+. ..| +++.+|.+++ ...++ +++ .++++++++++| ||||.+.+ +++|.++|
T Consensus 155 ~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~---l~~I~~~a 229 (447)
T PRK00451 155 KKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIED---LEEIAEIA 229 (447)
T ss_pred CEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCC---HHHHHHHH
Confidence 55667665554 554433 357 9999998764 33333 322 268999999999 89999965 99999999
Q ss_pred HHcCCEEEE--cccCCccccCCCCCCccccCCCCCceEEEe---cCccccCCCccceeEEEecccccccCCcchH-----
Q 036024 75 RNNGSIIIF--DSAYAAYVTDGCPRSIYEIPGAREVAIEIS---SFSKFSGFTGVRLGWTVVPEELLFSSGFPVI----- 144 (272)
Q Consensus 75 ~~~~~~vi~--D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~----- 144 (272)
+++|+++++ |.+.... ......+ +..++++ ++||.+.++|+++||+.++++++...-..+.
T Consensus 230 ~~~~~~~iv~~d~~~~g~-----~~~~~~~----~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~ 300 (447)
T PRK00451 230 HAGGALFIVGVDPVSLGL-----LKPPGEY----GADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVD 300 (447)
T ss_pred HHCCCEEEEEcChHHhcc-----CCCcccC----CCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecc
Confidence 999999988 4332111 1111112 2225555 6677777788899999988877432100000
Q ss_pred ---------------HHHHhhhhhccCCcchHHH-HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC
Q 036024 145 ---------------NDFNRIICTCFNGASNIAQ-AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI 207 (272)
Q Consensus 145 ---------------~~~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 207 (272)
...+..........+...+ .++...+.......+++.++++.++++++.+.|+++ |+++..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-- 378 (447)
T PRK00451 301 ADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFD-- 378 (447)
T ss_pred cCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecC--
Confidence 0011111112211222222 223223332344567899999999999999999998 677762
Q ss_pred CceEEE--eecCCCChHHHHHHHHHhcCeE-eeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 208 NAPYVW--AHFPGRKSWDVFAEILEKTHIT-TVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 208 ~~~~~~--i~l~~~~~~~~~~~ll~~~gi~-v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
++.+.+ +.++ ....++..+|+++ ||. ..+++.+.+...+.+|+++ .+++++++++++.|++++
T Consensus 379 ~~~~~~~~v~~~-~~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 379 GPFFNEFVVRLP-KPAEEVNEALLEK-GILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CCeEEEEEEecC-CCHHHHHHHHHhc-CCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 344433 5553 2557788888777 665 3455656544457899997 579999999999998764
No 177
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.83 E-value=1e-18 Score=151.41 Aligned_cols=227 Identities=14% Similarity=0.121 Sum_probs=143.8
Q ss_pred Hhcccc-eeEEeecCCCCCcccCCCC-------C-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024 18 EVGKYC-NIEYLECGPGNNFFPDLKG-------T-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84 (272)
Q Consensus 18 ~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D 84 (272)
.++..| +++.++.+.+.++.+|++. . ++++++++++|+||||...+ +++|+++|+++|+++++|
T Consensus 118 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD 194 (387)
T PRK09331 118 AAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLN 194 (387)
T ss_pred HHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEE
Confidence 356678 9999998433344455322 1 37899999999999998866 999999999999999999
Q ss_pred ccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh--------hccC
Q 036024 85 SAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC--------TCFN 156 (272)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 156 (272)
++|+.... +.....+. ..++++|++|+++ ++.++||++++++.+. .+.+... ....
T Consensus 195 ~a~~~g~~---~~~~~~~g----~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~--------~~~~~~~~~~~~~~~~~~~ 258 (387)
T PRK09331 195 GAYTVGRM---PVDGKKLG----ADFIVGSGHKSMA-ASAPSGVLATTEEYAD--------KVFRTSRKFGVKEVELLGC 258 (387)
T ss_pred CCcccCCc---CCCHHHcC----CCEEEeeCccccc-CCCCEEEEEECHHHHh--------hcccccCCCcccceeeece
Confidence 99984221 22222332 2388999999997 5568999999887732 2222110 0011
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec--CCCceEEEeecCCC---------ChHHH
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG--GINAPYVWAHFPGR---------KSWDV 224 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~i~l~~~---------~~~~~ 224 (272)
+.......++.+.+. ...+. .+..++..++.+++++.|+++ |+++.. +...+++.++.+.. ...++
T Consensus 259 ~~~~~~~~~~~aal~-~~~~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 336 (387)
T PRK09331 259 TLRGAPLVTLMASFP-HVVER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFL 336 (387)
T ss_pred ecCchHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhH
Confidence 111112222222222 11122 234556678888999999999 999874 23455665665421 12345
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHHHHh
Q 036024 225 FAEILEKTHITTVPGSGFGPGGEEYIRISG-FGHRESILEASRRLEAL 271 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l~~~ 271 (272)
...| +++||...+ +.....+|+.. ..++++++++++.|+++
T Consensus 337 ~~~L-~~~gI~~~~-----~~~~~i~ri~~~g~t~~di~~l~~aL~~i 378 (387)
T PRK09331 337 YEEL-KKRGIHGIK-----PGATKEFKLSTYGLTWEQVEYVADAFKEI 378 (387)
T ss_pred HHHH-HHcCceEEc-----cCCceEEEEEeccCCHHHHHHHHHHHHHH
Confidence 5555 455998433 22245567775 45999999999999875
No 178
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.83 E-value=9e-19 Score=146.30 Aligned_cols=235 Identities=18% Similarity=0.170 Sum_probs=170.2
Q ss_pred cccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024 20 GKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC 95 (272)
Q Consensus 20 ~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~ 95 (272)
+..| ++.++|++.++-..++ +++ .+++.++.+++.||.||++.| +++|.++|+++++++.+|-++.. +.-
T Consensus 112 e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~---Gki 185 (386)
T COG1104 112 ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQP---IAEIGEICKERGILFHVDAVQAV---GKI 185 (386)
T ss_pred HhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeeccc---HHHHHHHHHHcCCeEEEehhhhc---Cce
Confidence 4558 9999999986545554 333 288889999999999999977 99999999999999999999874 333
Q ss_pred CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH
Q 036024 96 PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL 175 (272)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 175 (272)
+..+..+.. .+...|.+|..|..| +|+++.++.....++...-.+.+ .....+.+.++..+..++++ ...
T Consensus 186 pi~~~~~~v----D~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~---g~RsGTenv~~Ivg~~~A~~-~a~ 255 (386)
T COG1104 186 PIDLEELGV----DLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQER---GLRSGTENVPGIVGFGKAAE-IAV 255 (386)
T ss_pred eccccccCc----ceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCC---CCCCCCccHHHHHHHHHHHH-HHH
Confidence 344444321 166778899999888 89999866553222222222222 23334466666666666666 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCC---CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCC----
Q 036024 176 EAVHSVVDYYKENTKILIDTLASL--GIKVYGGI---NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGG---- 246 (272)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~---~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~---- 246 (272)
+.++....++++.+++|.+.|.+. ++.+.+.. -.+.+.+.+++...+.+ ...++.+||++..|+.|....
T Consensus 256 ~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~l-l~~L~~~gI~vStGSACsS~~~~pS 334 (386)
T COG1104 256 EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESL-LLALDLAGIAVSTGSACSSGSLEPS 334 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHH-HHhccccCeEEeccccccCCCCCcc
Confidence 666888899999999999999975 56666643 24567788888666554 445677799999999997431
Q ss_pred -------------CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 247 -------------EEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 247 -------------~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
.+.+|||+ .++++|++.+++.|+++
T Consensus 335 hVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~ 374 (386)
T COG1104 335 HVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEI 374 (386)
T ss_pred HHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 47899998 45899999999998875
No 179
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.83 E-value=1e-18 Score=152.30 Aligned_cols=235 Identities=15% Similarity=0.110 Sum_probs=151.9
Q ss_pred cccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024 20 GKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC 95 (272)
Q Consensus 20 ~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~ 95 (272)
+..| +++.++.++++...++ +++ .++++++++++++||||.+.+ +++|.++|+++|+++++|++++... .
T Consensus 113 ~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~---~ 186 (402)
T TIGR02006 113 EREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK---I 186 (402)
T ss_pred HhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC---c
Confidence 4557 9999998755333333 222 267899999999999999987 8899999999999999999997422 1
Q ss_pred CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH
Q 036024 96 PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL 175 (272)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 175 (272)
+..+..+. ..+++.|.+|.+|.+| +|+++++++......+. .............+++.....++.+.++. ..
T Consensus 187 ~~~~~~~~----~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~-~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~ 258 (402)
T TIGR02006 187 PINVNELK----VDLMSISGHKIYGPKG--IGALYVRRKPRVRLEAL-IHGGGHERGMRSGTLPTHQIVGMGEAFRI-AK 258 (402)
T ss_pred ccCccccC----CCEEEEehhhhcCCCc--eEEEEEccCCCCCCCce-ecCCCccCCccCCCccHHHHHHHHHHHHH-HH
Confidence 22222221 2288889999888557 89988887653221110 00000000112234555555555555552 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC--c-eEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC------
Q 036024 176 EAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN--A-PYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG------ 245 (272)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--~-~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~------ 245 (272)
.+.++..+++++.++++++.|+++ ++.+.++.. . ....+.++.....++...+ .+|.+..|..|.+.
T Consensus 259 ~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~ 335 (402)
T TIGR02006 259 EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMAL---KDLAVSSGSACTSASLEPSY 335 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhc---CCEEEechhhcCCCCCCccH
Confidence 356778899999999999999886 676654321 1 1222334433444443332 38999888887542
Q ss_pred -----------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 246 -----------GEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 246 -----------~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
..+.+|+|+ ++|++|++++++.|+++
T Consensus 336 ~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~ 374 (402)
T TIGR02006 336 VLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSA 374 (402)
T ss_pred HHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence 137899996 56999999999999875
No 180
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.83 E-value=1.3e-19 Score=155.43 Aligned_cols=232 Identities=13% Similarity=0.068 Sum_probs=153.0
Q ss_pred HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
..++..| +++.++.+++....++ +++ .++++++++++++||||.+++ +++|.++|+++|+++++|++++....
T Consensus 106 ~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~ 182 (353)
T TIGR03235 106 RALERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQVVGKI 182 (353)
T ss_pred HHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhhcCCc
Confidence 3445568 9999998765434433 333 267899999999999999988 89999999999999999999874221
Q ss_pred CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC-CcchHHHHHhhhhhccCCcchHHHHHHHHhcc
Q 036024 93 DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-GFPVINDFNRIICTCFNGASNIAQAGGLACLS 171 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 171 (272)
+..+..+ +.-+++.|.+|.+|.+| +|+++++++..... .................+++.....++.+.++
T Consensus 183 ---~~~~~~~----~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~ 253 (353)
T TIGR03235 183 ---TVDLSAD----RIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAE 253 (353)
T ss_pred ---ccccccc----CCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHH
Confidence 2222222 12278889999887666 79999888752111 00000000000111233455555555555555
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC---ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCC--
Q 036024 172 SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN---APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGG-- 246 (272)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~-- 246 (272)
. .....++.+++++++.+++++.|++.|+++..+.. ..++.+.+++.+.+++...| ++ +|.+.+|..|+...
T Consensus 254 ~-~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~ 330 (353)
T TIGR03235 254 I-ARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDGVNSEALIVNL-RA-DAAVSTGSACSSSKYE 330 (353)
T ss_pred H-HHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCCcCHHHHHHHH-hC-CeEEEchhhcCCCCCC
Confidence 2 22456788899999999999999888998875432 33566666765655655555 66 89999999997543
Q ss_pred CCeEEEEccCCHHHHHH
Q 036024 247 EEYIRISGFGHRESILE 263 (272)
Q Consensus 247 ~~~~R~s~~~~~~~i~~ 263 (272)
+.++|.+++.++++...
T Consensus 331 ~~~~l~~~g~~~~~~~~ 347 (353)
T TIGR03235 331 PSHVLQAMGLDTDRARG 347 (353)
T ss_pred CCHHHHHcCCCHHHhCc
Confidence 44778887776665544
No 181
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.83 E-value=5.1e-19 Score=153.72 Aligned_cols=205 Identities=15% Similarity=0.144 Sum_probs=142.2
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++|++..++++.|... +++.+++|.++|++||+++|+||+|.++...+...........+| +-++||.+| +
T Consensus 178 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pD----i~t~~K~lg-g 252 (397)
T TIGR03246 178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----ILTSAKALG-G 252 (397)
T ss_pred cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCC----EEEeehhhh-C
Confidence 4677777775566666554 789999999999999999999999987654443222222222233 237899998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-- 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-- 200 (272)
|+++||++++++. .+.+......++++.+++++.++.+.++.... ++..++++++.+++++.|++++
T Consensus 253 G~pigav~~~~~i--------~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~ 321 (397)
T TIGR03246 253 GFPIGAMLTTTEI--------AAHLKVGTHGTTYGGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINAR 321 (397)
T ss_pred CcceeEEEEcHHH--------HHhccCCCcCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999998877 44443333334445778888888888874222 4577889999999999998864
Q ss_pred Ce---EecCCCceEEEeecCC---CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 201 IK---VYGGINAPYVWAHFPG---RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 201 ~~---~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
.. ... ..|.++.+.+.. .....+...++++ |+.+.+. +.+++|++ +..+++++++++++|++++
T Consensus 322 ~~~~~~vr-g~G~~~~i~~~~~~~~~~~~~~~~l~~~-Gv~~~~~------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l 393 (397)
T TIGR03246 322 YNVFSEIR-GKGLLIGAVLTEAYQGKAKQFVNAAAEE-GVIALIA------GPNVVRFAPSLVISDDDIDEGLARFERAI 393 (397)
T ss_pred CCCeEeee-cCceEEEEEEcCchhhHHHHHHHHHHHC-CeEEeec------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 11 122 235555666542 2344566666655 9998753 24689995 5679999999999998764
No 182
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.82 E-value=9.7e-19 Score=152.93 Aligned_cols=207 Identities=14% Similarity=0.122 Sum_probs=135.9
Q ss_pred CCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++-..+..+|..+++++ +++|.++|++|++++|+||+|.++.+.+...+.......+| +.++||.++ +
T Consensus 196 ~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pD----i~~lsK~l~-~ 270 (420)
T TIGR00700 196 NNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPD----LITTAKSLA-D 270 (420)
T ss_pred CcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCC----EEEeecccc-C
Confidence 45566666544777888765555 99999999999999999999998876654333333322333 346999998 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS---- 198 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 198 (272)
|+|+||+++++++ .+.+.......+.+.+++++.++.+.++.... ....++.++..+++++.|++
T Consensus 271 G~pig~v~~~~~i--------~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~ 339 (420)
T TIGR00700 271 GLPLSGVTGRAEI--------MDAPAPGGLGGTYAGNPLACAAALAVLAIIES---EGLIERARQIGRLVTDRLTTLKAV 339 (420)
T ss_pred CcceEEEEecHHH--------HhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999887 34443334445666888999888777752112 11222333333334444333
Q ss_pred CC-CeEecCCCceEEEeecCCC----ChH----HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHH
Q 036024 199 LG-IKVYGGINAPYVWAHFPGR----KSW----DVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRR 267 (272)
Q Consensus 199 ~g-~~~~~~~~~~~~~i~l~~~----~~~----~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~ 267 (272)
.+ +....+ .|.++|+.+... .+. .+...+ .++||.+.|+..|+ +++||++. .+++++++++++
T Consensus 340 ~~~~~~vrg-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f~----~~lRl~p~l~~~~~~l~~~~~~ 413 (420)
T TIGR00700 340 DPRIGDVRG-LGAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMFG----NIIRFLPPLTIGDELLSEGLDI 413 (420)
T ss_pred CCCEEEeec-cceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCCC----CEEEEECCCCcCHHHHHHHHHH
Confidence 23 333333 478888877321 122 233333 45599999987663 68999963 589999999999
Q ss_pred HHHhC
Q 036024 268 LEALF 272 (272)
Q Consensus 268 l~~~l 272 (272)
|+++|
T Consensus 414 l~~~l 418 (420)
T TIGR00700 414 LCAIL 418 (420)
T ss_pred HHHHh
Confidence 99875
No 183
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=2.9e-18 Score=149.79 Aligned_cols=208 Identities=14% Similarity=0.080 Sum_probs=144.6
Q ss_pred CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++...+++.|. +++++.+++|.++|++||+++|.||+|.++...+...+.......+| +-++||.+| +
T Consensus 197 ~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pD----iv~~sK~l~-~ 271 (421)
T PRK06777 197 DQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPD----LITMAKSLG-G 271 (421)
T ss_pred CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCC----EEeeehhhc-C
Confidence 34566666555888885 57899999999999999999999999998766654333333333344 227999999 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+|+||++++++. .+.+.......+++.+++++.++.+.++.... +...++++++.+++++.|+++
T Consensus 272 G~pigav~~~~~i--------~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~ 340 (421)
T PRK06777 272 GMPISAVVGRAEV--------MDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKAS 340 (421)
T ss_pred CCceEEEEEcHHH--------HhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999877 33333333445556899999999999973222 457778888888888888775
Q ss_pred -C-CeEecCCCceEEEeecCC----CChHHHHHHH---HHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHH
Q 036024 200 -G-IKVYGGINAPYVWAHFPG----RKSWDVFAEI---LEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRL 268 (272)
Q Consensus 200 -g-~~~~~~~~~~~~~i~l~~----~~~~~~~~~l---l~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l 268 (272)
+ +....+.+.++ .+.+.. ....++...+ +.+.||.+.|+..|+ +++||+. ..+++++++++++|
T Consensus 341 ~~~i~~vrg~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g----~~lr~~ppl~i~~~~i~~~~~~l 415 (421)
T PRK06777 341 CPAIVDIRARGSMV-AVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHG----NVIRFLYPLTIPDAQFSKALNIL 415 (421)
T ss_pred CCCeEEecCceEEE-EEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCC----CEEEEeCCCCCCHHHHHHHHHHH
Confidence 2 22344444444 444421 1122232222 334599999987553 5899995 57999999999999
Q ss_pred HHhC
Q 036024 269 EALF 272 (272)
Q Consensus 269 ~~~l 272 (272)
+++|
T Consensus 416 ~~~l 419 (421)
T PRK06777 416 TRLL 419 (421)
T ss_pred HHHH
Confidence 8864
No 184
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.81 E-value=1.7e-18 Score=150.13 Aligned_cols=202 Identities=14% Similarity=0.126 Sum_probs=139.8
Q ss_pred ceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccC-CCCCceEEEecCccccCCCcc
Q 036024 46 TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGFTGV 124 (272)
Q Consensus 46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~ 124 (272)
.++|++...-++.|.+.+ +++|.++|++||+++|+||+|+.+..+.....+.... ..+++.|+++||||++|..|
T Consensus 250 ~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G- 325 (476)
T PLN02955 250 RKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG- 325 (476)
T ss_pred ceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC-
Confidence 344444466899999988 8899999999999999999999888776555554432 23567799999999998777
Q ss_pred ceeEEEecccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 125 RLGWTVVPEELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 125 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
|+++++++. ++.+........+ ..++....++.+.++.... ....+++++++.++|++. .|+.
T Consensus 326 --Gfi~gs~~~--------~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~---~G~~ 390 (476)
T PLN02955 326 --GFIACSKKW--------KQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL---SGVD 390 (476)
T ss_pred --ceeecHHHH--------HHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh---cCCC
Confidence 999998877 4555543333222 2233333344444432111 145778999999999984 3654
Q ss_pred EecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 203 VYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 203 ~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
+ .++++.+.+... ...++..+|+++ ||.+.+..... |.+...+|++++ .+++|++++++.|+++
T Consensus 391 ~----~sPI~pI~ig~~~~a~~~~~~L~~~-Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~ 458 (476)
T PLN02955 391 I----SSPIISLVVGNQEKALKASRYLLKS-GFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSC 458 (476)
T ss_pred C----CCCEEEEEeCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHH
Confidence 3 356777777642 334456666555 99998766554 456778999984 4899999999999865
No 185
>PLN02651 cysteine desulfurase
Probab=99.81 E-value=1.3e-18 Score=149.70 Aligned_cols=227 Identities=16% Similarity=0.117 Sum_probs=152.7
Q ss_pred hcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCC
Q 036024 19 VGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG 94 (272)
Q Consensus 19 ~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~ 94 (272)
++..| +++.++.++++...++ +++ .++++++++++++||||.+.+ +++|.++|+++|+++++|.+++.. .
T Consensus 108 ~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g---~ 181 (364)
T PLN02651 108 LQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVG---K 181 (364)
T ss_pred HHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhhC---C
Confidence 34567 8888988754333333 222 267899999999999999987 889999999999999999999842 1
Q ss_pred CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccccc
Q 036024 95 CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG 174 (272)
Q Consensus 95 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 174 (272)
.+..+..+.. -+++.|.+|.+|.+| +|+++++++......+.... ..........+++.....++.+.++...
T Consensus 182 ~~~~~~~~~~----D~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~~g-~~~~~~~~~GT~~~~~~~~l~~al~~~~ 254 (364)
T PLN02651 182 IPVDVDDLGV----DLMSISGHKIYGPKG--VGALYVRRRPRVRLEPLMSG-GGQERGRRSGTENTPLVVGLGAACELAM 254 (364)
T ss_pred cccCcccCCC----CEEEechhhhCCCCc--eEEEEEcCCCCCCCCccccC-CCccCCccCCCccHHHHHHHHHHHHHHH
Confidence 1233333322 288889999655445 89999888764322111110 0000111233466666666666665322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCC-----ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC--
Q 036024 175 LEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGIN-----APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG-- 245 (272)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~-----~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-- 245 (272)
+..++.+++.++..+++++.|++ + |+++.++.. ..++.+.+++.+.+++...| ++ |.+..|+.|...
T Consensus 255 -~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L-~~--i~v~~g~~c~~~~~ 330 (364)
T PLN02651 255 -KEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGL-KE--VAVSSGSACTSASL 330 (364)
T ss_pred -HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHh-CC--EEEEchhhcCCCCC
Confidence 23477889999999999999986 4 888887521 34677778876777766666 33 999999988543
Q ss_pred ---------------CCCeEEEEc--cCCHHHHH
Q 036024 246 ---------------GEEYIRISG--FGHRESIL 262 (272)
Q Consensus 246 ---------------~~~~~R~s~--~~~~~~i~ 262 (272)
..+.+|+|+ ++|++|++
T Consensus 331 ~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 331 EPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 137899996 67888874
No 186
>PRK06460 hypothetical protein; Provisional
Probab=99.81 E-value=5.7e-18 Score=145.82 Aligned_cols=170 Identities=21% Similarity=0.306 Sum_probs=116.0
Q ss_pred cccccccC-----cccchHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQ-----AGDLEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~-----~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+ +..|...++..| +++.++.+.+ +....+. .+++|++++++|+||||.+++ +++|+++|+++
T Consensus 85 d~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~-~~l~~~~-~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~ 159 (376)
T PRK06460 85 NSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSD-NIIEKAK-SKRYDVVFVENITNPLLRVVD---ITELSKVCKEN 159 (376)
T ss_pred CEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCH-HHHHHhc-CCCceEEEEECCCCCCCcccC---HHHHHHHHHHc
Confidence 55666532 222556677888 8888877543 2211111 268899999999999999998 56789999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|.... . ..++ . .+..+++.|+||.++ ..+.+.||+++++++ ++.+.........
T Consensus 160 g~~vivDea~~~~~-~--~~~l-~----~~~divv~S~sK~l~G~~~~~~G~~~~~~~l--------~~~l~~~~~~~g~ 223 (376)
T PRK06460 160 GSILIVDATFSTPI-N--QKPL-E----LGADIVVHSASKFLAGHNDVIAGLAAGYGKL--------LNVIDQMRRTLGT 223 (376)
T ss_pred CCEEEEECCcCccc-c--CChh-h----cCCCEEEeecceeccCCCCceEEEEecCHHH--------HHHHHHHHHhcCC
Confidence 99999999997521 1 1111 1 123499999999985 234689999988776 5666655544443
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..++.. +..+++ +.++++.+.++++++++.+.+.|+++
T Consensus 224 ~~~~~~---a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 224 SLDPHA---AYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred CCCHHH---HHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 333322 222222 34667888899999999999999986
No 187
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.81 E-value=4.3e-18 Score=147.85 Aligned_cols=231 Identities=14% Similarity=0.114 Sum_probs=150.2
Q ss_pred eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCC
Q 036024 24 NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRS 98 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~ 98 (272)
+.++++++.+ ...+|.+. .+.++.+++++.+|-++ ..+ +++|.++|+++|+++++|++|.....++....
T Consensus 194 ~~~~y~vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~~~ 268 (493)
T PRK13580 194 HQRSYGVDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKVFT 268 (493)
T ss_pred eeEecccCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-CcC---HHHHHHHHHHcCCEEEEECchhhceeccccch
Confidence 5566777644 33455333 25677888887766644 555 89999999999999999999986555532211
Q ss_pred ccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHH
Q 036024 99 IYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEA 177 (272)
Q Consensus 99 ~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 177 (272)
.......+.-|+++|++|++ |.. .|++.+++++ .+.+.........++.++...++...+.......
T Consensus 269 -~~~~~~~~~D~vtgT~hKaL~GP~---GG~I~~~~~l--------~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~e 336 (493)
T PRK13580 269 -GDEDPVPHADIVTTTTHKTLRGPR---GGLVLAKKEY--------ADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPE 336 (493)
T ss_pred -hhcCCCCCCcEEEeCChhhccCCC---eEEEEecHHH--------HHHHhhCCCcccCCCccHHHHHHHHHHHHHhCcc
Confidence 00000111228899999988 533 4998888877 4555433322233333333333333333221122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCC-CCC---CCeEE
Q 036024 178 VHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFG-PGG---EEYIR 251 (272)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~-~~~---~~~~R 251 (272)
.++.++++.++.++|++.|.+.|+.+.. ...+.++++.+.+.. ....+.+.|++.||.+.+-..+. +.+ +..+|
T Consensus 337 f~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLR 416 (493)
T PRK13580 337 FQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIR 416 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEE
Confidence 3668899999999999999999998863 245788889997533 33356656777799997655443 333 67899
Q ss_pred EEccC------CHHHHHHHHHHHHHh
Q 036024 252 ISGFG------HRESILEASRRLEAL 271 (272)
Q Consensus 252 ~s~~~------~~~~i~~~l~~l~~~ 271 (272)
++... +++|++++.+.|.++
T Consensus 417 Ig~~A~ttrg~teedi~~iad~l~~~ 442 (493)
T PRK13580 417 LGTPALTTLGMGSDEMDEVAELIVKV 442 (493)
T ss_pred eccchhhhcCCCHHHHHHHHHHHHHH
Confidence 99633 578999999998765
No 188
>PLN02624 ornithine-delta-aminotransferase
Probab=99.81 E-value=1.5e-18 Score=153.51 Aligned_cols=206 Identities=14% Similarity=0.139 Sum_probs=138.1
Q ss_pred CCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++|++..++|++|.++++++ +++|.++|++||+++|+||+|.++...+...........+| +.++||.+|.+
T Consensus 223 ~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pD----iv~lsK~lggG 298 (474)
T PLN02624 223 DRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPD----VVILGKALGGG 298 (474)
T ss_pred CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCC----EEEecccccCC
Confidence 56778888889999999887774 99999999999999999999987654443222211111222 23468999966
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-- 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-- 200 (272)
++++|+++.++++ ...+.......+++.+++.+.++.+.++.... ....++..++.+.+++.|.++.
T Consensus 299 ~~pigav~~~~~i--------~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~---~~l~~~~~~~~~~l~~~L~~l~~~ 367 (474)
T PLN02624 299 VIPVSAVLADKDV--------MLCIKPGEHGSTFGGNPLASAVAMAALQVVQD---EKLAERSAKLGQELRDQLQKIQKQ 367 (474)
T ss_pred CCcceeeeecHHH--------HhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHh
Confidence 6999999998776 33343333344445788888888888863222 2344455566666666665531
Q ss_pred ----CeEecCCCceEEEeecCC-----CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024 201 ----IKVYGGINAPYVWAHFPG-----RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE 269 (272)
Q Consensus 201 ----~~~~~~~~~~~~~i~l~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~ 269 (272)
+....+ .|.+..+.+.. ....++...| .++||.+.|+. .+.+||+. ..+++++++++++|+
T Consensus 368 ~~~~i~~vrg-~G~~~~i~l~~~~~~~~~a~~~~~~L-~e~GV~v~p~~------~~~lR~~p~l~~t~e~id~~l~~L~ 439 (474)
T PLN02624 368 FPKLIKEVRG-RGLLNAVVLNSPKLGPVSAYDVCLKL-KERGLLAKPTH------DTIIRLAPPLSISEDELQECSKALS 439 (474)
T ss_pred CCCceEEEEe-eEEEEEEEecCCCcChHHHHHHHHHH-HhCCeEEecCC------CCEEEEECCccCCHHHHHHHHHHHH
Confidence 222333 34555555542 1234566665 45599998753 57899984 679999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
+++
T Consensus 440 ~~l 442 (474)
T PLN02624 440 DVL 442 (474)
T ss_pred HHH
Confidence 764
No 189
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.81 E-value=1.8e-18 Score=152.38 Aligned_cols=205 Identities=15% Similarity=0.181 Sum_probs=130.2
Q ss_pred eEEEEecC-CCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024 47 DIIFFCSP-NNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV 124 (272)
Q Consensus 47 ~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 124 (272)
-+.++..| +...|.+++ .+.+++|.++|++||+++|+||+|.++...+...+...++..+| +.|+||.++ +|+
T Consensus 220 iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pD----i~t~sK~l~-~G~ 294 (451)
T PRK06918 220 IAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPD----LITVSKSLG-AGV 294 (451)
T ss_pred eEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCC----EEeeehhhc-CCC
Confidence 34444456 444466454 55599999999999999999999998876664444444433344 448999998 999
Q ss_pred ceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----CC
Q 036024 125 RLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS----LG 200 (272)
Q Consensus 125 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g 200 (272)
|+||++++++. .+.+.......+.+.+++.+.++.+.++.... ....++.++..+++.+.|++ .+
T Consensus 295 pig~v~~~~~i--------~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~l~~l~~~~~ 363 (451)
T PRK06918 295 PISGVIGRKEI--------MDESAPGELGGTYAGSPLGCAAALAVLDIIEK---ENLNDRAIELGKVVMNRFEEMKNKYN 363 (451)
T ss_pred ccEEEEEcHHH--------HhccCCCCcCcCCCcCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999887 33443334455666888999987777752211 11222333333344444433 22
Q ss_pred -CeEecCCCceEEEeecCC----CCh----HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024 201 -IKVYGGINAPYVWAHFPG----RKS----WDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE 269 (272)
Q Consensus 201 -~~~~~~~~~~~~~i~l~~----~~~----~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~ 269 (272)
+....+.++++.|....+ ..+ ..+...+ .++||.+.|+..|+ +++|+++ ..+++++++++++|+
T Consensus 364 ~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~~----~~lrl~p~l~~t~~~id~~l~~l~ 438 (451)
T PRK06918 364 CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTYG----NVIRVLMPLVITDEQLEEGLTIIE 438 (451)
T ss_pred CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCCC----CEEEEECCCccCHHHHHHHHHHHH
Confidence 222334466666554321 112 2233333 45699999976553 6899996 358999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
+++
T Consensus 439 ~~l 441 (451)
T PRK06918 439 ESL 441 (451)
T ss_pred HHH
Confidence 764
No 190
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=1.8e-18 Score=148.60 Aligned_cols=222 Identities=18% Similarity=0.199 Sum_probs=141.8
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...+...| +++.++...... +++ .+++++|++++|+||+|. ..++++|+++|+
T Consensus 91 d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~----l~~~i~~~tklv~le~P~NP~~~---~~dl~~I~~la~ 163 (366)
T PRK08247 91 DELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKA----IEQAITPNTKAIFIETPTNPLMQ---ETDIAAIAKIAK 163 (366)
T ss_pred CEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHH----HHHhcccCceEEEEECCCCCCCc---HHHHHHHHHHHH
Confidence 56666665443 334455688 888887631111 222 268899999999999865 477999999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++++++|+|++|...... .++ . .+..++++|+||.++. ++.+.|+++++++.+ .+.+...+...
T Consensus 164 ~~g~~lIvD~t~~~~~~~---~p~-~----~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l-------~~~~~~~~~~~ 228 (366)
T PRK08247 164 KHGLLLIVDNTFYTPVLQ---RPL-E----EGADIVIHSATKYLGGHNDVLAGLVVAKGQEL-------CERLAYYQNAA 228 (366)
T ss_pred HcCCEEEEECCCcccccc---Cch-h----cCCcEEEeecceeccCCCceeeeEEecChHHH-------HHHHHHHHHhc
Confidence 999999999999532211 111 1 1234999999999973 356899988874331 45555445444
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC-CCceEEEeecCCCChHHHHHHHHH-
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG-INAPYVWAHFPGRKSWDVFAEILE- 230 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-~~~~~~~i~l~~~~~~~~~~~ll~- 230 (272)
....+...+..+.+.++ .+..+.++.+++++.+.+.|+++ ++. +..| .+|++.| .+++ .+...++++
T Consensus 229 g~~~s~~~a~l~~~~l~-----tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~---~~~~~~~~~~ 299 (366)
T PRK08247 229 GAVLSPFDSWLLIRGMK-----TLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQD---EEWVNPFLKS 299 (366)
T ss_pred CCCCChHHHHHHHhccC-----cHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECC---HHHHHHHHHc
Confidence 44456666665555444 33455667799999999999987 665 4344 5676666 6653 222222222
Q ss_pred ------------hcCeEeeCCCCCCC-----------CCCCeEEEEccC
Q 036024 231 ------------KTHITTVPGSGFGP-----------GGEEYIRISGFG 256 (272)
Q Consensus 231 ------------~~gi~v~~g~~~~~-----------~~~~~~R~s~~~ 256 (272)
..++.+.|++.+.. -+.+.+|+|+..
T Consensus 300 l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl 348 (366)
T PRK08247 300 LKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI 348 (366)
T ss_pred CCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc
Confidence 23555566654421 125689999865
No 191
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.80 E-value=1.8e-18 Score=151.74 Aligned_cols=207 Identities=18% Similarity=0.186 Sum_probs=139.2
Q ss_pred CCceEEEEe-cCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFC-SPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~-~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++++|++. .|+| +|.+.+ ++.+++|.++|++||+++|+||+|.++..+.. .........+| +.+|||.+|
T Consensus 194 ~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~-~~~~~~~~~pD----i~t~sK~l~- 266 (423)
T TIGR00713 194 EEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALG-GAQEYFGVEPD----LTTLGKIIG- 266 (423)
T ss_pred CcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcc-hhHHHhCCCcc----hhhhhhhhc-
Confidence 467888886 7787 788887 58899999999999999999999988744321 11111222333 237999999
Q ss_pred CccceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
+|+|+||++++++. .+.+.. ....++++.+++++.++.+.++.... ...+..++..+..++.+.+.++
T Consensus 267 ~G~pig~v~~~~~i--------~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (423)
T TIGR00713 267 GGLPVGAFGGRREI--------MERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLE 338 (423)
T ss_pred CCCceeeeeEHHHH--------HHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887 444432 22334556888999988888873222 2456666667777777777777
Q ss_pred hCCCeEecCCCceEEEeecC--CC---------Ch---HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHH
Q 036024 198 SLGIKVYGGINAPYVWAHFP--GR---------KS---WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILE 263 (272)
Q Consensus 198 ~~g~~~~~~~~~~~~~i~l~--~~---------~~---~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~ 263 (272)
+.++.......|.++.+.+. .. +. ..+...+++ +||.+.++ .| +.+|++...+++++++
T Consensus 339 ~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~-~~-----~~~~l~~~~t~~~i~~ 411 (423)
T TIGR00713 339 DTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPS-QF-----EACFLSAAHTEEDIEN 411 (423)
T ss_pred hcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecC-Cc-----cceeeECCCCHHHHHH
Confidence 77655422112333333332 10 11 135556665 59998653 22 3578988789999999
Q ss_pred HHHHHHHhC
Q 036024 264 ASRRLEALF 272 (272)
Q Consensus 264 ~l~~l~~~l 272 (272)
++++|++++
T Consensus 412 ~~~~l~~~l 420 (423)
T TIGR00713 412 TIEAAEEVF 420 (423)
T ss_pred HHHHHHHHH
Confidence 999998764
No 192
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=1.1e-17 Score=146.58 Aligned_cols=205 Identities=13% Similarity=0.102 Sum_probs=139.6
Q ss_pred CCceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++...+||+|.+++ ++.+++|.++|++||+++|+||+|.++...+...........+| ++ ++||.+| +
T Consensus 203 ~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pD-ii---tlsK~l~-~ 277 (443)
T PRK08360 203 EGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPD-II---TLGKPLG-G 277 (443)
T ss_pred CCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCC-EE---Eeccccc-C
Confidence 56777777755899999887 55799999999999999999999998765554323222322333 22 6799999 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+|+||++++++. .+.+.......+.+.+++.+.++.+.++.... +...++.+++.+++++.|+++
T Consensus 278 G~pigav~~~~~i--------~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~ 346 (443)
T PRK08360 278 GLPISATIGRAEI--------MDSLPPLAHAFTLSGNPVASAAALAVIEEIEE---KNLLKRAEKLGNYTKKRLEEMKKK 346 (443)
T ss_pred CceeEEEEEcHHH--------HhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998877 44444333445556788888888888874322 235566777777777777654
Q ss_pred -CCe-EecCCCceEEEeecCCC---------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHH
Q 036024 200 -GIK-VYGGINAPYVWAHFPGR---------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASR 266 (272)
Q Consensus 200 -g~~-~~~~~~~~~~~i~l~~~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~ 266 (272)
++. -.. ..|.++-+++... ....+...+++ +||.+.+.. .+.+|++ +..++++++++++
T Consensus 347 ~~~v~~vr-g~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~------~~~lr~~P~l~~t~~~id~~~~ 418 (443)
T PRK08360 347 HELIGDVR-GIGLMIGVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTFFS------GNVLRIQPPLTIEKEVLDEGLD 418 (443)
T ss_pred CCCeeeee-ccceEEEEEEecCCcccCccHHHHHHHHHHHHH-CCeEEeecC------CCEEEEeCCCCCCHHHHHHHHH
Confidence 221 122 2466666666311 12245555555 599986432 3679996 5679999999999
Q ss_pred HHHHhC
Q 036024 267 RLEALF 272 (272)
Q Consensus 267 ~l~~~l 272 (272)
+|++++
T Consensus 419 ~l~~~l 424 (443)
T PRK08360 419 ILEEAI 424 (443)
T ss_pred HHHHHH
Confidence 998764
No 193
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.79 E-value=6.9e-18 Score=146.15 Aligned_cols=212 Identities=16% Similarity=0.139 Sum_probs=136.5
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC---CCceEEEecCccccC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA---REVAIEISSFSKFSG 120 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g 120 (272)
+++++|++.+++||+|.+.+ ++++.++|+++|+++|+||+|.....+.......+..+. .+..+++.|+||.+|
T Consensus 137 ~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g 213 (392)
T PLN03227 137 DQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG 213 (392)
T ss_pred CCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh
Confidence 36778888899999999988 889999999999999999999833333222223332111 133488889999887
Q ss_pred CCccceeEEEecccccccCCcchHHHHHhhhhhccCCc--chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA--SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS 198 (272)
Q Consensus 121 ~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 198 (272)
..| |+++++++. .+.+........++. ++..+.|+.+.+..... .+++.++++++.+++++.|.+
T Consensus 214 ~~g---g~v~~~~~~--------~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~ 280 (392)
T PLN03227 214 SVG---GMTVGSEEV--------VDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTN 280 (392)
T ss_pred ccC---cEEecCHHH--------HHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHh
Confidence 454 888888776 444433322222223 34455555555542221 256788899999999999986
Q ss_pred CCCeE----------ecCCCceEEEeecCCCC----------hHHHHHHHHHhcCeEeeCCCC-----CCCCCCCeEEEE
Q 036024 199 LGIKV----------YGGINAPYVWAHFPGRK----------SWDVFAEILEKTHITTVPGSG-----FGPGGEEYIRIS 253 (272)
Q Consensus 199 ~g~~~----------~~~~~~~~~~i~l~~~~----------~~~~~~~ll~~~gi~v~~g~~-----~~~~~~~~~R~s 253 (272)
.+... .....++++.+.+.+.. ..++...++++ |+.+.+... +..-.+..+|++
T Consensus 281 ~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gi~~~~~~~~~~~~~~~~P~~~iR~~ 359 (392)
T PLN03227 281 SSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSE-GVAVVSTGGHVKKFLQLVPPPCLRVV 359 (392)
T ss_pred cCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHC-CCEEEecccccCCcCCCCCCceEEEE
Confidence 54321 12234667777775311 12555555555 999865221 111225788999
Q ss_pred cc--CCHHHHHHHHHHHHHhC
Q 036024 254 GF--GHRESILEASRRLEALF 272 (272)
Q Consensus 254 ~~--~~~~~i~~~l~~l~~~l 272 (272)
+. .|+||++++++.|++++
T Consensus 360 ~~~~~t~eei~~~~~~l~~~~ 380 (392)
T PLN03227 360 ANASHTREDIDKLLTVLGEAV 380 (392)
T ss_pred ecCCCCHHHHHHHHHHHHHHH
Confidence 74 49999999999998763
No 194
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.79 E-value=9.3e-18 Score=145.76 Aligned_cols=204 Identities=12% Similarity=0.116 Sum_probs=142.6
Q ss_pred CceEEEEecCCCccccCCC--HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSPNNPTGHAAT--QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~--~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+..+.++..|.+++|.+++ ++.+++|.++|++|++++|+||+|.++...+.. .... ..+....+.|+||.+| +
T Consensus 186 ~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~--~a~~--~~~~~pdi~t~~K~l~-~ 260 (408)
T PRK04612 186 GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTL--FAHW--QEQVTPDIVTLAKALG-G 260 (408)
T ss_pred CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCch--hhhh--hcCCCCCEEEEcchhc-C
Confidence 4456677778778887766 568999999999999999999999976554422 1111 2234567889999998 9
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+|+||++++++. .+.+......++++.+++.+.++.+.++.... ++..++.+++.+++++.|+++
T Consensus 261 G~piga~~~~~~~--------~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~ 329 (408)
T PRK04612 261 GFPIGAMLAGPKV--------AETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAE 329 (408)
T ss_pred CCceEEEEECHHH--------HhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999988776 34443333445556788999988888874322 456777788888888888765
Q ss_pred -CCe-EecCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 200 -GIK-VYGGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 200 -g~~-~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
++. ... ..|.++.+.+... ...++...+ .++|+.+.+. +.+.+|+. +..+++|+++++++|+++|
T Consensus 330 ~~~i~~vr-g~Gl~~~i~~~~~~~~~a~~i~~~l-~~~Gvlv~~~------g~~~lRl~Ppl~it~eeid~~l~~l~~~l 401 (408)
T PRK04612 330 FGVFAQVR-GRGLMLGAVLAPAHAGQAGAILDLA-AEHGLLLLQA------GPDVLRFVPALNLTDAELADGLARLRLAL 401 (408)
T ss_pred CCCeeeee-ccceEEEEEecCchhhHHHHHHHHH-HHCCeEEeeC------CCCEEEEcCCccCCHHHHHHHHHHHHHHH
Confidence 221 122 2466766776421 233444444 4559999753 24789998 4568999999999998764
No 195
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.79 E-value=6.2e-18 Score=147.32 Aligned_cols=206 Identities=12% Similarity=0.124 Sum_probs=140.8
Q ss_pred CCceEEEEecCCCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++..+++++|...+++ .+++|.++|++|++++|+||+|.++...+..... +..+....++ ++||.++..
T Consensus 185 ~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~-~~~~~~~di~---~~gK~l~~g 260 (401)
T TIGR01885 185 PNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCV-DHENVKPDIV---LLGKALSGG 260 (401)
T ss_pred CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHH-hhcCCCCCEE---EeeccccCC
Confidence 4566777667899999988644 6999999999999999999999876554433222 2222222222 467999855
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
++|+|+++++++. .+.+.......+.+.+++.+.++.+.++.... +...++.+++.+++++.|++++..
T Consensus 261 ~~~ig~v~~~~~i--------~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~---~~l~~~~~~~~~~~~~~L~~l~~~ 329 (401)
T TIGR01885 261 VYPVSAVLADDDV--------MLTIKPGEHGSTYGGNPLACAVAVAALEVLEE---EKLAENAEKLGEIFRDQLKKLPKP 329 (401)
T ss_pred CCCcEEEEEcHHH--------HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhccCC
Confidence 5899999998877 33333222333445678888888888863322 234567777789999999987533
Q ss_pred E---ecCCCceEEEeecCCC----ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 203 V---YGGINAPYVWAHFPGR----KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 203 ~---~~~~~~~~~~i~l~~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+ ..+ .|.+..+.++.. ...++...|.+ +||.+.|+. .+.+||+. ..+++++++++++|++++
T Consensus 330 ~~~~~~g-~g~~~~i~~~~~~~~~~~~~l~~~l~~-~Gv~v~~~~------~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 330 IITEVRG-RGLLNAIVIDESKTGRTAWDLCLKLKE-KGLLAKPTH------GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ceeEEee-cCeeEEEEeccCcchhHHHHHHHHHHh-CCEEEEecC------CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 3 223 455555555422 34566666654 599997643 56899995 569999999999998865
No 196
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.79 E-value=1.1e-18 Score=141.88 Aligned_cols=204 Identities=22% Similarity=0.317 Sum_probs=140.6
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
+.+=+=++++||||.|.+ ++.++ +..+..+|.|-+|.+-.+.+ +.... |.-|.+.|+||.-|.+|
T Consensus 136 ~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp----I~~~a---D~DiMLFT~SK~TGHAG 200 (363)
T PF04864_consen 136 PSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP----ITAPA---DHDIMLFTLSKLTGHAG 200 (363)
T ss_dssp CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS-------S-B-----SEEEEEHHHHCS-GG
T ss_pred CCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc----cCCCC---CCceEEEEEecccCccc
Confidence 344556778999999987 55555 35577889999999854443 22221 22299999999999999
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH---------HHHHHHHHHHHHHHHHHHH
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL---------EAVHSVVDYYKENTKILID 194 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---------~~~~~~~~~~~~~~~~l~~ 194 (272)
.|+||.++.++.+ ...+..+....+.+.+.=+|.-++++|..... +..+--++.+++|.+.|++
T Consensus 201 SR~GWAlVKD~~V-------a~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~ 273 (363)
T PF04864_consen 201 SRFGWALVKDEEV-------AKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRA 273 (363)
T ss_dssp G-EEEEEES-HHH-------HHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred cccceeeecCHHH-------HHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHH
Confidence 9999999988774 78888888888999999999988888872111 2456677899999999999
Q ss_pred HHHhC-CCeE--ec-----------CCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHH
Q 036024 195 TLASL-GIKV--YG-----------GINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRES 260 (272)
Q Consensus 195 ~L~~~-g~~~--~~-----------~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~ 260 (272)
.++.- -+.+ .. .....|.|+.|...++++ +...|+++||.-+.|..|+.+ +.++|+|+-.++++
T Consensus 274 ~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~D-C~~~l~~~~I~tr~G~~fga~-~ryVRlSml~~~d~ 351 (363)
T PF04864_consen 274 AVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDED-CYAVLREAKIITRSGVLFGAD-SRYVRLSMLKRDDD 351 (363)
T ss_dssp HHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSS-HHHHHHCTTEEEEEGGGGTS--TTEEEEESSS-HHH
T ss_pred HHHhcCceecCcCCchhccccccccCCCCCeEEEecCCccccc-HHHHHHhCCcccCCCCccCCC-CCeEEEeccCCHHH
Confidence 99874 2222 11 124569999998544333 677788889999999999874 88999999899999
Q ss_pred HHHHHHHHHHh
Q 036024 261 ILEASRRLEAL 271 (272)
Q Consensus 261 i~~~l~~l~~~ 271 (272)
++.++++|..+
T Consensus 352 Fd~l~~rL~~l 362 (363)
T PF04864_consen 352 FDQLLERLSKL 362 (363)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHhh
Confidence 99999999864
No 197
>PRK14012 cysteine desulfurase; Provisional
Probab=99.78 E-value=2.6e-17 Score=143.63 Aligned_cols=249 Identities=14% Similarity=0.110 Sum_probs=150.0
Q ss_pred cccccccCccc-chH---Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LED---EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~---~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++.+.... ... .++..| +++.++.+++....++ +++ .++++++++++++||||.+.+ +++|.++|+
T Consensus 95 d~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~I~~la~ 171 (404)
T PRK14012 95 KHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQD---IAAIGEICR 171 (404)
T ss_pred CEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhh---HHHHHHHHH
Confidence 45555544332 222 223457 8999988755333333 333 267899999999999999976 889999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
++++++++|++++... .+..+..+. .| +++.|++|.+| |+ .+|+++++++......+.... .........
T Consensus 172 ~~g~~vivD~a~~~g~---~~~~~~~~~--~D--~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g-~~~~~~~~~ 241 (404)
T PRK14012 172 ERGIIFHVDAAQSVGK---VPIDLSKLK--VD--LMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHG-GGHERGMRS 241 (404)
T ss_pred HcCCEEEEEcchhcCC---cccCcccCC--CC--EEEEehhhccC-CC-ceEEEEEecCCCCCCCceecC-CCccCCccC
Confidence 9999999999997421 122222221 22 77779999887 43 489998887653211110000 000000111
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-----CceEEEeecCCCChHHHHHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-----NAPYVWAHFPGRKSWDVFAEIL 229 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-----~~~~~~i~l~~~~~~~~~~~ll 229 (272)
.+.+.....+..+.+... ....++..++.++.++++.+.|+++ ++.+.++. ....+++.+. +..++...+
T Consensus 242 gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l- 317 (404)
T PRK14012 242 GTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV--EGESLIMAL- 317 (404)
T ss_pred CCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc--CHHHHHHhC-
Confidence 123333333333333311 2234567788889999999999876 56654321 1224555543 223444333
Q ss_pred HhcCeEeeCCCCCCCC-----------------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 230 EKTHITTVPGSGFGPG-----------------GEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~-----------------~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+ ++.+.+|..|.+. ..+.+|+++ .++++|++++++.|+++
T Consensus 318 -~-~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~ 376 (404)
T PRK14012 318 -K-DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKS 376 (404)
T ss_pred -C-CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence 2 7888788777532 137899997 46899999999999875
No 198
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.78 E-value=1.6e-16 Score=136.50 Aligned_cols=234 Identities=15% Similarity=0.163 Sum_probs=148.0
Q ss_pred cccccccCcc-cchHH----hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAG-DLEDE----VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~-~~~~~----~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+ .+... ++..| +++.++.+++.. ...++++++++++|+||||.+.+ +++|+++|+++
T Consensus 90 d~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~-----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~ 161 (366)
T PRK07582 90 DTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE-----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAA 161 (366)
T ss_pred CEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH-----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHc
Confidence 5667765433 44433 34578 999998864421 22368899999999999998765 99999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|... .+ ..++ .+. .| ++++|+||.++ .+|+|+||++++++.+ .+.+...+.....
T Consensus 162 g~~lvVD~t~~~~-~~--~~p~-~~g--~D--ivv~S~sK~l~G~~g~~~G~v~~~~~~l-------~~~l~~~~~~~g~ 226 (366)
T PRK07582 162 GALLVVDNTTATP-LG--QRPL-ELG--AD--LVVASDTKALTGHSDLLLGYVAGRDPEL-------MAAVERWRLLAGA 226 (366)
T ss_pred CCEEEEECCCCCc-cc--cCch-hcC--Cc--EEEecccccccCCCCeeEEEEEcCcHHH-------HHHHHHHHHHhCC
Confidence 9999999998631 11 1122 221 12 78899999884 5789999999864432 4555555544444
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-Ee--c----C----------CCceEEEeecCC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VY--G----G----------INAPYVWAHFPG 218 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~--~----~----------~~~~~~~i~l~~ 218 (272)
.+++.....+...++ .+..+.++.++++..+.+.|+++ .+. +. + | ..|..+.+.++
T Consensus 227 ~~~~~~a~l~~r~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~- 300 (366)
T PRK07582 227 IPGPFEAWLAHRSLG-----TLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA- 300 (366)
T ss_pred CCCHHHHHHHHhccc-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-
Confidence 455555444444443 33556678889999999999987 332 22 1 1 13556777885
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCC--------------CCCCeEEEEccC--CHHHHHHHHHHHH
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGP--------------GGEEYIRISGFG--HRESILEASRRLE 269 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~--------------~~~~~~R~s~~~--~~~~i~~~l~~l~ 269 (272)
+ .+...+.+++.++... +.++|. ...+.+|+|+.. +++.++.+.++|+
T Consensus 301 -~-~~~~~~~~~~l~~~~~-~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 301 -D-AAAAERFVAASRLVVA-ATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred -C-HHHHHHHHHhCCccee-cccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 2 3445566666665442 222221 124689999754 3444555555554
No 199
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.77 E-value=7.4e-17 Score=138.90 Aligned_cols=223 Identities=18% Similarity=0.204 Sum_probs=140.6
Q ss_pred hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCC
Q 036024 19 VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR 97 (272)
Q Consensus 19 ~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~ 97 (272)
+...| ++..++.+....+.-.+ .+++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 100 ~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~---~ 171 (369)
T cd00614 100 LPKLGIEVTFVDPDDPEALEAAI--KPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ---R 171 (369)
T ss_pred HhhcCeEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC---C
Confidence 45677 88887765211111112 157899999999999999987 889999999999999999999753321 1
Q ss_pred CccccCCCCCceEEEecCccccCCCc-cceeEEEecc-cccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH
Q 036024 98 SIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPE-ELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL 175 (272)
Q Consensus 98 ~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 175 (272)
++ .+ +..+++.|++|.+|.+| .+.||+++++ ++ .+.+...........++....++...++
T Consensus 172 ~~-~~----g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l--------~~~l~~~~~~~g~~~~p~~a~~~l~~l~---- 234 (369)
T cd00614 172 PL-EL----GADIVVHSATKYIGGHSDVIAGVVVGSGEAL--------IQRLRFLRLALGTILSPFDAWLLLRGLK---- 234 (369)
T ss_pred hh-hh----CCcEEEeccceeccCCCCceEEEEEeCcHHH--------HHHHHHHHHhhCCCCCHHHHHHHHcCCC----
Confidence 11 22 12388999999997555 7889999987 55 5555555443444455555444444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC-Ce-EecC----------------CCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024 176 EAVHSVVDYYKENTKILIDTLASLG-IK-VYGG----------------INAPYVWAHFPGRKSWDVFAEILEKTHITTV 237 (272)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~L~~~g-~~-~~~~----------------~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~ 237 (272)
.+..+.++..++++.+.+.|++++ +. +..| ..|.++.+.+++ +.+...++++.-.+.-
T Consensus 235 -tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~--~~~~~~~f~~~l~~~~- 310 (369)
T cd00614 235 -TLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG--GLEAAKKFLNALKLFS- 310 (369)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC--CHHHHHHHHHcCCcce-
Confidence 335567888999999999999874 32 2222 246677788864 2333444555444431
Q ss_pred CCCCCC----------------C---------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 238 PGSGFG----------------P---------GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 238 ~g~~~~----------------~---------~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.++| . -.++.+|+|+.. |+.+.++..|+++|
T Consensus 311 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl--E~~~dl~~dl~~al 368 (369)
T cd00614 311 LAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI--EDVEDLIADLEQAL 368 (369)
T ss_pred EcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 111111 0 014689999865 34555566666553
No 200
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.77 E-value=7.8e-17 Score=140.66 Aligned_cols=233 Identities=12% Similarity=0.084 Sum_probs=147.1
Q ss_pred Hhcccc-ee----EEeecCCCCCcccC-CCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 036024 18 EVGKYC-NI----EYLECGPGNNFFPD-LKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 18 ~~~~~g-~~----~~~~~~~~~~~~~d-l~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~ 86 (272)
.++..| ++ ++++.+.++...++ ++. .++++++++++++|.||.+.+ +++|+++|+++|+++++|++
T Consensus 133 ~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~a 209 (406)
T TIGR01814 133 QLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLA 209 (406)
T ss_pred HHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcc
Confidence 345667 66 45555433222332 222 268999999999999999987 99999999999999999999
Q ss_pred CCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhh---------------
Q 036024 87 YAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRI--------------- 150 (272)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~--------------- 150 (272)
++... .+..+..+. .-++++|.+|.++ .|| .|..+.++.. ....+.... +...
T Consensus 210 q~~G~---~~id~~~~g----vD~~~~s~hK~l~g~pG--~~l~v~~~~~-~~~~p~~~g-~~~~~~~~~~~~~~~~~~~ 278 (406)
T TIGR01814 210 HAVGN---VPLDLHDWG----VDFACWCTYKYLNAGPG--AGAFVHEKHA-HTERPRLAG-WWGHARPTRFKMDNTLGLI 278 (406)
T ss_pred cccCC---cccccccCC----CCEEEEcCccccCCCCC--eEEEEehhhh-hhcCCCCCc-ccCCCCccccccccccCCC
Confidence 98622 122333332 2289999999873 455 3433333322 111111000 0000
Q ss_pred -hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEecCCC----ceEEEeecCCCC
Q 036024 151 -ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-----GIKVYGGIN----APYVWAHFPGRK 220 (272)
Q Consensus 151 -~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~----~~~~~i~l~~~~ 220 (272)
......+++.....++.++++.......++.+++.++..+++++.|++. |+++.++.. +..+.+.++ ..
T Consensus 279 ~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~ 357 (406)
T TIGR01814 279 PCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP 357 (406)
T ss_pred ccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC
Confidence 0011234566665655556653323345788899999999999999874 377776532 345667776 45
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHHhC
Q 036024 221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEALF 272 (272)
Q Consensus 221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~~l 272 (272)
..++...|.+ +||.+... ..+.+|+|+ +++++|+++++++|++++
T Consensus 358 ~~~~~~~L~~-~gi~v~~~------~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 358 GKAVFQALIK-RGVIGDKR------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHH-CCEEEecc------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 5666666654 59987521 246899995 569999999999998764
No 201
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.76 E-value=7.9e-17 Score=138.92 Aligned_cols=201 Identities=15% Similarity=0.119 Sum_probs=122.4
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV 124 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 124 (272)
+++++++++++|+||.+.| +++|.++|+++|+++++|++|+....+..........+..+..+.+.|+||.+|..|
T Consensus 143 ~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G- 218 (370)
T PRK05937 143 GRIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG- 218 (370)
T ss_pred CcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc-
Confidence 3456677899999999988 889999999999999999999864444332222211122233367899999999767
Q ss_pred ceeEEEecccccccCCcchHHHHHhh--hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 125 RLGWTVVPEELLFSSGFPVINDFNRI--ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 125 r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
+.++..++. ...+... ......+.+++...++.++++.. .+..+..++++++.++++++.|...+.
T Consensus 219 --~~vl~~~~~--------~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l-~~~~~~~~~~l~~l~~~l~~~l~~~~~- 286 (370)
T PRK05937 219 --AALLSSSEV--------KQDLMLNSPPLRYSTGLPPHLLISIQVAYDFL-SQEGELARKQLFRLKEYFAQKFSSAAP- 286 (370)
T ss_pred --eEEEcCHHH--------HHHHHHhCCCCeecCCCCHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHhcCCCCC-
Confidence 334444443 2222211 11122234555555444444311 111244567888888888887764321
Q ss_pred EecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 203 VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 203 ~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+....+.+++....++... ++++||.+.. .+.+ ..+.+|+|+ ++|++|++++++.|+++
T Consensus 287 ------~~~~~i~~~~~~~~~~~~~-L~~~gi~v~~--~~~~-~~~~iRis~~~~~t~edid~l~~~L~~~ 347 (370)
T PRK05937 287 ------GCVQPIFLPGISEQELYSK-LVETGIRVGV--VCFP-TGPFLRVNLHAFNTEDEVDILVSVLATY 347 (370)
T ss_pred ------CCEEEEEeCChhHHHHHHH-HHHCCeeEEe--eCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 1112244554444454444 4555998863 2222 246899997 47999999999999875
No 202
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.76 E-value=8.5e-17 Score=138.88 Aligned_cols=236 Identities=20% Similarity=0.244 Sum_probs=160.3
Q ss_pred hHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
....++.| ++..++.+.++...++ +++ .++++++++++.+|.||...+ +++|.++|+++++++++|.+++...
T Consensus 106 ~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~g~ 182 (371)
T PF00266_consen 106 EEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSAGC 182 (371)
T ss_dssp HHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTTTT
T ss_pred ccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEee---eceehhhhhccCCceeEechhcccc
Confidence 34445778 8989998766444433 222 289999999999999999988 8899999999999999999998522
Q ss_pred cCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH-----H--HHHhh-----h-hhccCCc
Q 036024 92 TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI-----N--DFNRI-----I-CTCFNGA 158 (272)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~-----~--~~~~~-----~-~~~~~~~ 158 (272)
.+..+..+. .-++++|..|.+|.+| +|+++.+++......+... + .+... . .....++
T Consensus 183 ---~~id~~~~~----~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 253 (371)
T PF00266_consen 183 ---VPIDLDELG----ADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTP 253 (371)
T ss_dssp ---SS--TTTTT----ESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS-
T ss_pred ---ccccccccc----cceeeecccccCCCCc--hhhheehhhhhhccccccccccccccccchhcccccccccccccce
Confidence 122333332 1289999999556566 7999999977321100000 0 00000 0 0112256
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCCCChHHHHHHHHHhcC
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPGRKSWDVFAEILEKTH 233 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~~~~~~~~~~ll~~~g 233 (272)
+.....++...++.......++.+++..+..+++++.|+++ ++.+.++ ..+..+.+.+++.+..++...|.++ |
T Consensus 254 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~-~ 332 (371)
T PF00266_consen 254 NVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEER-G 332 (371)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHH-T
T ss_pred eeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCCHHHHHHHHhhc-C
Confidence 77767777777765545667888999999999999999998 5566442 2355677788877777777777777 9
Q ss_pred eEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHH
Q 036024 234 ITTVPGSGFGP------GGEEYIRISG--FGHRESILEA 264 (272)
Q Consensus 234 i~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~ 264 (272)
|.+..|..+.. .-.+.+|+|+ +++++|++++
T Consensus 333 I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 333 IAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred EEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 99999887750 1138999995 6799999875
No 203
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.75 E-value=2.4e-16 Score=136.46 Aligned_cols=170 Identities=19% Similarity=0.272 Sum_probs=112.2
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+...| +++.++.+....+.-.+ .+++|+|++++|+||||.+.+ +++|+++|+++
T Consensus 101 d~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i--~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~ 175 (390)
T PRK08133 101 DHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAV--RPNTKLFFLETPSNPLTELAD---IAALAEIAHAA 175 (390)
T ss_pred CEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHc
Confidence 55666544322 334556788 88888875332332222 268999999999999999987 89999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|...... .++ ... . .+++.|+||.++.+|.++ ||++++++. ++.+.........
T Consensus 176 gi~livD~t~~~~~~~---~pl-~~g--~--Divv~S~sK~~~g~g~~~GG~vv~~~~~--------~~~~~~~~~~~g~ 239 (390)
T PRK08133 176 GALLVVDNCFCTPALQ---QPL-KLG--A--DVVIHSATKYLDGQGRVLGGAVVGSKEL--------MEEVFGFLRTAGP 239 (390)
T ss_pred CCEEEEECCCcccccC---Cch-hhC--C--cEEEeecceeecCCcceEeEEEEcCHHH--------HHHHHHHHHHhCC
Confidence 9999999998643321 121 221 1 288999999998788887 556666655 3444433333333
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..+...+. .+++ +.+.+..+.++..+++..+.+.|++.
T Consensus 240 ~~~~~~a~---~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~ 277 (390)
T PRK08133 240 TLSPFNAW---VFLK--GLETLSLRMEAHSANALALAEWLEAH 277 (390)
T ss_pred CCCHHHHH---HHHc--ccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 34434322 2222 22355667778888999999999987
No 204
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.75 E-value=4.3e-17 Score=129.22 Aligned_cols=210 Identities=19% Similarity=0.189 Sum_probs=150.6
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccC-C
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSG-F 121 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g-~ 121 (272)
.+.|+++....-...|..-| +++|.+++++||+++++||+|..+.++.......+..+ +.+..+..++++|++| +
T Consensus 192 ~r~klv~TDg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga 268 (417)
T KOG1359|consen 192 MRLKLVVTDGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA 268 (417)
T ss_pred heEEEEEecceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC
Confidence 35566766677888898877 89999999999999999999998888877666665543 4556699999999997 6
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
.| ||..+|.++ +..++....+..+ +.++.....+.+++..... -.....+.+.+.+++++.++..
T Consensus 269 ~G---Gyttgp~~l--------i~llrqr~RpylFSnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 269 SG---GYTTGPKPL--------ISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred CC---CCccCChhH--------HHHHHhcCCceeecCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhc
Confidence 67 999999999 4444433332222 2222222223333331111 1445567888999999999999
Q ss_pred CCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 200 GIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 200 g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
|+.+.+. ..+++.+.+. ......+..+||++ ||+|..-+..- |.++..+|+.++ .++||++++++++.++
T Consensus 336 GftIsg~-~hPI~pv~lGda~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~v 409 (417)
T KOG1359|consen 336 GFTISGA-SHPICPVMLGDARLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEV 409 (417)
T ss_pred CceecCC-CCCccceecccHHHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHH
Confidence 9999884 4667777776 34556778889988 99997544332 566778888874 4899999999998764
No 205
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=1.4e-16 Score=139.04 Aligned_cols=206 Identities=19% Similarity=0.144 Sum_probs=136.1
Q ss_pred CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++...+.-+| ..+|++.+++|.++|++||+++|+||+|.++...+........ +....+.++||.++ +
T Consensus 197 ~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~----gv~pDi~tlsK~l~-~ 271 (425)
T PRK07495 197 QRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHH----EVAADLTTMAKGLA-G 271 (425)
T ss_pred CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeeccc----CCCCCEEeehhhhc-C
Confidence 4566777763333378 4578999999999999999999999999976555532222222 22345678999998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+++|+++++++.. +.+.......+++.+++++.++.+.++.... ....++.+++.+++++.|+++
T Consensus 272 G~pigav~~~~~i~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~ 340 (425)
T PRK07495 272 GFPLAAVTGRAEIM--------DAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE---EDLCERANQLGNRLKQRLASLRET 340 (425)
T ss_pred CccceEEEEcHHHH--------hccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999988873 3332223345556888888877777652221 234455555555565555543
Q ss_pred -C-C-eEecCCCceEEEeecCCCC--------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHH
Q 036024 200 -G-I-KVYGGINAPYVWAHFPGRK--------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASR 266 (272)
Q Consensus 200 -g-~-~~~~~~~~~~~~i~l~~~~--------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~ 266 (272)
+ + .+.+ .|.++|+++...+ ...+...+++ .|+.+.+.. .. .+.+||. +..++++++++++
T Consensus 341 ~~~i~~vrG--~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~g---~~-~~~~r~~Ppl~it~~~id~~~~ 413 (425)
T PRK07495 341 VPEIADIRG--PGFMNAVEFNDADSGLPSAEFANRVRLKALE-KGLILLTCG---VH-GNVIRFLAPITIQDDVFAEALD 413 (425)
T ss_pred CCCeeeeec--CceEEEEEEecCCCCCccHHHHHHHHHHHHH-CCeEEeecC---CC-CCEEEEeCCCccCHHHHHHHHH
Confidence 2 1 2233 4889999985311 1234444444 599986532 11 3679998 5679999999999
Q ss_pred HHHHhC
Q 036024 267 RLEALF 272 (272)
Q Consensus 267 ~l~~~l 272 (272)
+|+++|
T Consensus 414 ~l~~~l 419 (425)
T PRK07495 414 ILEASI 419 (425)
T ss_pred HHHHHH
Confidence 998864
No 206
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.75 E-value=2.1e-16 Score=135.58 Aligned_cols=236 Identities=16% Similarity=0.095 Sum_probs=142.3
Q ss_pred cccccccCccc-c----hHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEE-EecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-L----EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIF-FCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~----~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~-~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|... | .......| ++++++.+ ....++ +++ .+++++++ +++|+||+|.+.+ +++|+++
T Consensus 100 ~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~--~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~---~~~i~~~ 174 (363)
T TIGR01437 100 NEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA--NECSAEQLEAAITEKTAAILYIKSHHCVQKSMLS---VEDAAQV 174 (363)
T ss_pred ceEEEECccchhcCCchHHHHHhcCCeEEEEcCC--CCCCHHHHHHhcChhceEEEEEecCCCCcCCcCC---HHHHHHH
Confidence 46666442222 3 34455567 88888763 233333 333 37888766 5688999999888 7889999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
|+++|+++++|++|.. . ......+.. .+++.|++|.+ +|++.|+++.+++. ++........
T Consensus 175 a~~~gi~vivD~a~~~---~--~~~~~~~g~----D~~~~S~~K~l--~gp~~G~l~~~~~~--------i~~~~~~~~~ 235 (363)
T TIGR01437 175 AQEHNLPLIVDAAAEE---D--LQKYYRLGA----DLVIYSGAKAI--EGPTSGLVLGKKKY--------IEWVKLQSKG 235 (363)
T ss_pred HHHcCCeEEEECCCCC---c--hHHHHHcCC----CEEEEeCCccc--CCCceEEEEEcHHH--------HHHHHhccCC
Confidence 9999999999999972 1 111122211 27789999976 46679999887766 3332211110
Q ss_pred -----ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC--Cc-----eEEEeecC--C
Q 036024 154 -----CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI--NA-----PYVWAHFP--G 218 (272)
Q Consensus 154 -----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~~-----~~~~i~l~--~ 218 (272)
.....+..++.++...+.... .+..+.+.++++.+.+.|+++ |+++..+. .+ ..+.++.. +
T Consensus 236 ~~~~~~~~~~~~~gl~aAl~~~~~~~----~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g 311 (363)
T TIGR01437 236 IGRAMKVGKENILGLTAALEQYLSTG----KESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELG 311 (363)
T ss_pred CcceeccCHHHHHHHHHHHHHHHccC----cccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCC
Confidence 011122334444444443222 233444556677899999987 88876421 11 22334432 4
Q ss_pred CChHHHHHHHHHhcC--eEeeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHHHHhC
Q 036024 219 RKSWDVFAEILEKTH--ITTVPGSGFGPGGEEYIRISG-FGHRESILEASRRLEALF 272 (272)
Q Consensus 219 ~~~~~~~~~ll~~~g--i~v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l~~~l 272 (272)
.+..++...| ++.| |.+++ .|.+ .+.+|++. +.+++|++.+.++|++++
T Consensus 312 ~~~~~l~~~L-~~~~~~I~~r~--~~~~--~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 312 MTAADVVQAL-RQGEPAIYTRG--YKAN--EGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred CCHHHHHHHH-hcCCCCEEEee--eeec--CCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 4566766665 4446 66554 3333 57888886 457999999999998864
No 207
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.75 E-value=1.8e-16 Score=140.67 Aligned_cols=253 Identities=15% Similarity=0.097 Sum_probs=158.7
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
.|++..+..+ |...++..| +++.+|++.+ +.+|++. .++++++++++|| |||.. ..++++|+++|+++
T Consensus 163 ~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~--~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~ 237 (481)
T PRK04366 163 EVIVPDSAHGTNPASAAMAGFKVVEIPSNED--GLVDLEALKAAVGEDTAALMLTNPN-TLGLF--ERNILEIAEIVHEA 237 (481)
T ss_pred EEEEcCCccHhHHHHHHHcCCEEEEeecCCC--CCcCHHHHHhhcccCCeEEEEeCCC-Ccccc--chHHHHHHHHHHHc
Confidence 5667665444 777788888 9999999644 4455332 2688999999998 99964 35799999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcchHH--------
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPVIN-------- 145 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~~~-------- 145 (272)
|+++++|.++.....+. .+...+. --++++|.+|.+|.| |--+|++.+++++.+..-.++..
T Consensus 238 gal~iVD~a~~~~~~g~--~~~~~~G----aD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l 311 (481)
T PRK04366 238 GGLLYYDGANLNAILGK--ARPGDMG----FDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRL 311 (481)
T ss_pred CCEEEEEecChhhhccc--CCccccC----CCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceee
Confidence 99999999985321221 1222222 228899999998744 34478888877654322111000
Q ss_pred HH--H-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc-eEEEeec-----
Q 036024 146 DF--N-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA-PYVWAHF----- 216 (272)
Q Consensus 146 ~~--~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~i~l----- 216 (272)
.+ . ..+.....+.+.....++...+...+.+.+++..++..++++++++.|+++ +.+..+... .-+.+..
T Consensus 312 ~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~ 390 (481)
T PRK04366 312 DYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YDLPYDRPCMHEFVLSGKKLKE 390 (481)
T ss_pred cccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCCeeEEEEEECccccc
Confidence 00 0 000111112233444555555555566777888888999999999999986 333222111 1122332
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
++.+..++..+|.++ ||.+. +..+.....+.+|+++ .+|++|++++++.|+++
T Consensus 391 ~g~~~~~v~~~L~~~-Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i 445 (481)
T PRK04366 391 TGVRTLDIAKRLLDY-GFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAAMKQI 445 (481)
T ss_pred cCCCHHHHHHHHHHC-CccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHHHHHH
Confidence 234567777777665 99875 2222111256899996 56899999999998765
No 208
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.74 E-value=2.1e-16 Score=137.25 Aligned_cols=168 Identities=15% Similarity=0.248 Sum_probs=110.6
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...+...| +++.++...... +++ .+++|+|++++|+||||.+.+ +++|.++|+
T Consensus 104 d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~----l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~ 176 (400)
T PRK06234 104 DHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEE----VRNALKANTKVVYLETPANPTLKVTD---IKAISNIAH 176 (400)
T ss_pred CEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHH----HHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHH
Confidence 56666665433 223346678 888887642111 222 267899999999999999987 888899998
Q ss_pred Hc--CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhh--
Q 036024 76 NN--GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRI-- 150 (272)
Q Consensus 76 ~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~-- 150 (272)
++ ++++|+|++|...... .++ .. +..+++.|+||.++.+|.++ ||+++++++ .+.+...
T Consensus 177 ~~~~~i~livDea~~~~~~~---~~l-~~----g~Divv~S~sK~l~g~g~~~gG~v~~~~~~--------~~~l~~~~~ 240 (400)
T PRK06234 177 ENNKECLVFVDNTFCTPYIQ---RPL-QL----GADVVVHSATKYLNGHGDVIAGFVVGKEEF--------INQVKLFGI 240 (400)
T ss_pred hcCCCCEEEEECCCCchhcC---Cch-hh----CCcEEEeeccccccCCCCceeEEEEecHHH--------HHHHHHHHH
Confidence 87 9999999999865432 122 22 22389999999998788775 999988876 4444332
Q ss_pred hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
........++.....+...+ +.+..+.++.++++..+.+.|+.+
T Consensus 241 ~~~~g~~l~p~~a~l~~~~l-----~tl~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 241 KDMTGSVIGPFEAFLIIRGM-----KTLQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred HHhcCCCCCHHHHHHHHhcc-----CcHHHHHHHHHHHHHHHHHHHHcC
Confidence 11222223433333222322 334556677778999999999876
No 209
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=1.4e-16 Score=139.88 Aligned_cols=207 Identities=15% Similarity=0.100 Sum_probs=137.2
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-..+...|... +++.+++|.++|++||+++|+||+|.++...+...........+| +.|+||.+| +|
T Consensus 207 ~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pD----i~t~sK~lg-~G 281 (433)
T PRK08117 207 EVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPD----IMTIAKGIA-SG 281 (433)
T ss_pred cEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCC----Eeehhhhcc-CC
Confidence 444555544466667764 678899999999999999999999998655543222222222222 468999999 99
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 199 (272)
+++|+++++++. .+.+.......+.+.+++++.++.+.++.... +...++++++.+++++.|.++
T Consensus 282 ~pigav~~~~~i--------~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~ 350 (433)
T PRK08117 282 LPLSAVVASKEL--------MEQWPLGSHGTTFGGNPVACAAALATLEVIKE---EKLLDNANEMGAYALERLEVLKEKH 350 (433)
T ss_pred CcceeEEEcHHH--------HhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999887 44443333444556788888888888873222 345566677777777777664
Q ss_pred CCeEecCCCceEEEeecCCC------C-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHH
Q 036024 200 GIKVYGGINAPYVWAHFPGR------K-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEA 270 (272)
Q Consensus 200 g~~~~~~~~~~~~~i~l~~~------~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~ 270 (272)
++.......|.++++.+... . ...+...+ .++||.+.+.. . ..+.+|++ +..+++++++++++|++
T Consensus 351 ~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g---~-~~~~lRl~p~~~~t~~~i~~~~~~l~~ 425 (433)
T PRK08117 351 PVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKC-LEKGLLFYLCG---N-AGNVLRMIPPLTVTKEEIDEGLDILDE 425 (433)
T ss_pred CceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHH-HHCCCEEeecC---C-CCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 22222223466777777321 1 22334444 45599886532 1 24689999 46799999999999987
Q ss_pred hC
Q 036024 271 LF 272 (272)
Q Consensus 271 ~l 272 (272)
++
T Consensus 426 ~l 427 (433)
T PRK08117 426 AL 427 (433)
T ss_pred HH
Confidence 64
No 210
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.74 E-value=1.7e-16 Score=137.29 Aligned_cols=173 Identities=18% Similarity=0.213 Sum_probs=112.4
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
+++++|++++|+||||.+++ +++|.++|+++++++|+|++|...... .++ ... .+ +++.|+||.++.+|
T Consensus 145 ~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~---~pl-~~g--~D--iv~~S~sK~l~g~g 213 (386)
T PRK06767 145 PNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ---RPL-ELG--CD--AVVHSATKYIGGHG 213 (386)
T ss_pred cCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC---Cch-hcC--Cc--EEEecCcceecCCC
Confidence 67899999999999999987 788899999999999999999642222 122 111 12 78889999998788
Q ss_pred cce-eEEEecccccccCCcchHHHHH-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 036024 124 VRL-GWTVVPEELLFSSGFPVINDFN-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-G 200 (272)
Q Consensus 124 ~r~-G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 200 (272)
.++ ||++++++. +.... ..........++..+.++...+ +.+..+.++.++++..+.+.|+++ +
T Consensus 214 ~~~gG~v~~~~~~--------i~~~~~~~~~~~g~~~~~~~a~l~~~~L-----~tl~~r~~~~~~~a~~la~~L~~~p~ 280 (386)
T PRK06767 214 DVVAGVTICKTRA--------LAEKIRPMRKDIGGIMAPFDAWLLLRGL-----KTLAVRMDRHCDNAEKIVSFLKNHDA 280 (386)
T ss_pred CceeEEEEeChHH--------HHHHHHHHHHHhCCCCCHHHHHHHHcCC-----CcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 885 899888876 33322 2222222223433333322222 233567788899999999999987 6
Q ss_pred CeE-ecC----------CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCC
Q 036024 201 IKV-YGG----------INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGS 240 (272)
Q Consensus 201 ~~~-~~~----------~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~ 240 (272)
+.. ..| ..|..+.+.+++. ...+.+..-++..++.+.-|.
T Consensus 281 v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~ 332 (386)
T PRK06767 281 VEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGD 332 (386)
T ss_pred ccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCC
Confidence 653 322 2345677778632 223334444456576665553
No 211
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.74 E-value=3.9e-16 Score=136.07 Aligned_cols=206 Identities=15% Similarity=0.067 Sum_probs=131.3
Q ss_pred CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC-
Q 036024 45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT- 122 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~- 122 (272)
++.++++-..+++.|. ..+++.+++|.++|++||+++|+||++.++...+.........-.+| +.++||.+| +
T Consensus 194 ~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD----i~~~~K~lg-~~ 268 (412)
T TIGR02407 194 LPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD----IVCLSKSIS-GY 268 (412)
T ss_pred ceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC----EEEechhcc-CC
Confidence 4566665555888998 57888999999999999999999999986644332222222222344 235899998 7
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHh---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS-EGLEAVHSVVDYYKENTKILIDTLAS--- 198 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~--- 198 (272)
|+++|+++++++. .. . .......+++.++++..++.+.++. ... .+..++.++..+++++.|+.
T Consensus 269 G~pigav~~~~~~-~~-~-------~~~~~~~T~~gnpl~~aaa~a~l~~~i~~---~~l~~~~~~~g~~l~~~l~~l~~ 336 (412)
T TIGR02407 269 GLPLALTLIKPEL-DV-W-------KPGEHNGTFRGNNLAFVTATAALEYYWSD---DAFEKAVQRKSEIIQERLDRIVA 336 (412)
T ss_pred ccceeEEEEchhh-hc-c-------CCCccCCCCCccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998765 21 1 1122334445667765555555542 111 22334444444444444443
Q ss_pred -CC-CeEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 199 -LG-IKVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 199 -~g-~~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
.+ +.......|.++|+.++... ...+...+++ +||.+.+...+ .+.+|++. ..+++|+++++++|+++|
T Consensus 337 ~~~~~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~-~Gv~v~~~~~~----~~~lr~~p~l~~t~~~i~~~~~~l~~~l 410 (412)
T TIGR02407 337 EYPELIKQVRGRGLMQGIECGDGDLAGKIAKAAFE-NGLIIETSGPN----DEVIKLLPPLTIDEETLQQGLDILEQAV 410 (412)
T ss_pred hCCCceEeeecceeEEEEEecChHHHHHHHHHHHH-CCCEEeccCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 22 22333346899999997533 3345555555 59999764321 45799884 569999999999999875
No 212
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=1.1e-15 Score=132.67 Aligned_cols=171 Identities=16% Similarity=0.164 Sum_probs=113.9
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+...| +++.++......+.-.+ .+++|++++++|+||||.+.+ +++|+++|+++
T Consensus 100 D~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i--~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~ 174 (405)
T PRK08776 100 DTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADAL--AQSPKLVLIETPSNPLLRITD---LRFVIEAAHKV 174 (405)
T ss_pred CEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCccCC---HHHHHHHHHHc
Confidence 56666655443 333445567 77777653211111112 267899999999999999865 89999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC-ccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT-GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~-g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|.... ...++ .+. .| +++.|.+|.++.+ +...|+++.+++.+ .+++.........
T Consensus 175 gi~vIvD~a~a~~~---~~~pl-~~g--aD--ivv~S~tK~l~g~~~~~~G~vv~~~~~l-------~~~l~~~~~~~g~ 239 (405)
T PRK08776 175 GALTVVDNTFLSPA---LQKPL-EFG--AD--LVLHSTTKYINGHSDVVGGAVVARDAEL-------HQQLVWWANALGL 239 (405)
T ss_pred CCEEEEECCCcccc---cCCcc-ccc--CC--EEEecCceeecCCCCceEEEEEeCCHHH-------HHHHHHHHHhcCC
Confidence 99999999997521 11222 221 12 8899999999744 57789988765442 4455444443333
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..+++...++. .+.++++.+.++.++++..+.+.|+++
T Consensus 240 ~~s~~~a~l~~-----~gl~tl~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 240 TGSPFDAFLTL-----RGLRTLDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred CCCHHHHHHHH-----hhhCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 35555544433 333566888899999999999999986
No 213
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.73 E-value=3.5e-16 Score=124.92 Aligned_cols=226 Identities=16% Similarity=0.189 Sum_probs=165.4
Q ss_pred cccccCccc-chHHhcccc--eeEEeecCCCCCcccCCCC-------CCCceEEEEe-cCCCccccCCCHHHHHHHHHHH
Q 036024 6 SVIVGQAGD-LEDEVGKYC--NIEYLECGPGNNFFPDLKG-------TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~dl~~-------~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.+..|+|+ -...+...| .+..++.-....-.+|++. .|.-.++++. ..|||||+..+.|+..+|++..
T Consensus 128 VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vi 207 (410)
T KOG1412|consen 128 VYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVI 207 (410)
T ss_pred eEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHH
Confidence 566778887 345566677 5666666555455666443 3444455555 5599999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCcc---ccCCCCCceEEEecCccccCCCccceeEEEe--cccccccCCcchHHHHHh
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIY---EIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PEELLFSSGFPVINDFNR 149 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~~~~~~~~~~~~~~~~~ 149 (272)
++.+.+.+.|-+|+++..++...... ........+++..||+|.+|+-+-|+|-+.. .+... ...+..++..
T Consensus 208 k~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~---i~~v~SQl~l 284 (410)
T KOG1412|consen 208 KSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAV---IAGVKSQLTL 284 (410)
T ss_pred HhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhH---HHHHHHHHHH
Confidence 99999999999999988775322211 1111223469999999999999999998544 33332 2334567777
Q ss_pred hhhhccCCcchHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCC
Q 036024 150 IICTCFNGASNIAQAGGLACLSSEGL-----EAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRK 220 (272)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~ 220 (272)
......+.++..+..++..+|..+.. ..++.+-.++++++..|++.|..++ |.....+-|+|-+-.+.
T Consensus 285 viR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLt--- 361 (410)
T KOG1412|consen 285 VIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLT--- 361 (410)
T ss_pred HHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCC---
Confidence 77777878888999999999986554 4577788899999999999999983 55556677888776663
Q ss_pred hHHHHHHHHHhcCeEeeC
Q 036024 221 SWDVFAEILEKTHITTVP 238 (272)
Q Consensus 221 ~~~~~~~ll~~~gi~v~~ 238 (272)
+ ..+..|.+++.|++.+
T Consensus 362 p-~qV~~li~~h~vyLl~ 378 (410)
T KOG1412|consen 362 P-AQVDHLIENHKVYLLS 378 (410)
T ss_pred H-HHHHHHHHhceEEEec
Confidence 2 5688899999999965
No 214
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.73 E-value=2.3e-16 Score=129.88 Aligned_cols=213 Identities=18% Similarity=0.172 Sum_probs=158.5
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~ 122 (272)
.-+|+|.+-+.+..+|.+-| +++|++++++||++.++||+|....|++.+..+.+-++ +...-|+.|++.|+||+-
T Consensus 302 svPKivAFEtVhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcV 378 (570)
T KOG1360|consen 302 SVPKIVAFETVHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCV 378 (570)
T ss_pred CCCceEEEeeeeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccc
Confidence 45789999999999999988 99999999999999999999998888866555554433 333448999999999998
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCC--cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG--ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 200 (272)
| ||+.+...+ ++-++.+...+.++ .++.....+.+..+....++....|++.+++..++++.|.+.|
T Consensus 379 G---GYIAat~~L--------vDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~G 447 (570)
T KOG1360|consen 379 G---GYIAATRKL--------VDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELG 447 (570)
T ss_pred c---ceehhhhhH--------HHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 8 999998888 66666666433332 2333333333333322223447788999999999999999999
Q ss_pred CeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 201 IKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 201 ~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+.+.+. .+.++-+.+. .....+....|+.++||++..-.+.. +.|...+|++- ..|++.++-++..+..+
T Consensus 448 iPVi~~-pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~v 521 (570)
T KOG1360|consen 448 IPVIPN-PSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDV 521 (570)
T ss_pred CcccCC-CcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHH
Confidence 999874 4566767776 34567888999999999998655443 56778899985 34777777777766543
No 215
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.73 E-value=1.9e-15 Score=131.06 Aligned_cols=168 Identities=19% Similarity=0.200 Sum_probs=108.3
Q ss_pred cccccccCccc-c----hHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-L----EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~----~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. + ...+...| +++.++. ..++ +++ .+++|+|++++|+||||.+++ +++|.++|
T Consensus 105 d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-----~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la 176 (398)
T PRK07504 105 DHVVAARALFGSCRYVVETLLPRYGIESTLVDG-----LDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIA 176 (398)
T ss_pred CEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHH
Confidence 55666655433 2 23334567 7777752 1112 222 268999999999999999988 88999999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcccee-EEEecccccccCCcchHHHHHhhhhh
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLG-WTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G-~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+++|+++|+|++|...... .+ ..+. ..+++.|++|.++.+|.++| +++++++.+ ...+......
T Consensus 177 ~~~gi~lvvD~a~a~~~~~---~~-~~~g----aDivv~S~sK~l~g~g~~~GG~vv~~~~~i-------~~~~~~~~~~ 241 (398)
T PRK07504 177 NQAGAKLVVDNVFATPLFQ---KP-LELG----AHIVVYSATKHIDGQGRCLGGVVLSDKAWI-------EEHLQDYFRH 241 (398)
T ss_pred HHcCCEEEEECCccccccC---Cc-hhhC----CCEEEeeccccccCCccceEEEEEeCcHHH-------HHHHHHHHHH
Confidence 9999999999999854322 11 1221 23889999999987899986 555555552 1223322222
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
.....+......+.+.+ +.+..+.++..+++..+.+.|+++
T Consensus 242 ~g~~~s~~~A~~~l~~L-----~tl~~R~~~~~~na~~la~~L~~~ 282 (398)
T PRK07504 242 TGPSLSPFNAWTLLKGL-----ETLPVRVRQQTESAAAIADFLAGH 282 (398)
T ss_pred hCCCCCHHHHHHHHhcc-----chHHHHHHHHHHHHHHHHHHHHcC
Confidence 23334444433333333 334667777789999999999886
No 216
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=3.5e-16 Score=130.80 Aligned_cols=224 Identities=17% Similarity=0.175 Sum_probs=163.5
Q ss_pred eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCcccc
Q 036024 24 NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 102 (272)
.+..+|.++-.....-++ +++.+|++-.-+...|+..++++ ++++.++|++||+++|.||++.++...|........
T Consensus 165 g~~~vpfnDi~al~~ai~--~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~ 242 (404)
T COG4992 165 GFRHVPFNDIEALEAAID--EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHY 242 (404)
T ss_pred CceecCCCCHHHHHHHhc--cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHh
Confidence 445555543322222222 47888888777999998876555 899999999999999999999988777654444444
Q ss_pred CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHH
Q 036024 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVV 182 (272)
Q Consensus 103 ~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 182 (272)
...+|.+ ++.|.+| .|..+|.+++.+.. .+-+..-...++++.|+++..++.+.++.... +...
T Consensus 243 gV~PDI~----tlaK~Lg-GG~PigA~la~~~~--------~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~---e~ll 306 (404)
T COG4992 243 GVEPDIL----TLAKALG-GGFPIGAMLATEEI--------ASAFTPGDHGSTFGGNPLACAVALAVLEVLLE---EGLL 306 (404)
T ss_pred CCCCCEE----Eeecccc-CCccceeeEEchhh--------hhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc---hhHH
Confidence 4455533 5899999 88999999998554 33455556778888999999999999885443 5667
Q ss_pred HHHHHHHHHHHHHHHhC--CCeEec--CCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--cc
Q 036024 183 DYYKENTKILIDTLASL--GIKVYG--GINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GF 255 (272)
Q Consensus 183 ~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~ 255 (272)
++.+++.++|++.|.++ .+.+.. -..|.++-+.+... ...++...+.++ |+.+.+.. ++.+||. +.
T Consensus 307 ~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~-gvL~~~a~------~~ViR~~PpL~ 379 (404)
T COG4992 307 ENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREE-GVLVLPAG------PNVIRFLPPLV 379 (404)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHHC-CeEEecCC------CCeEEecCCcc
Confidence 77888888888888886 222221 12477777888643 356777776666 99998654 5699999 56
Q ss_pred CCHHHHHHHHHHHHHhC
Q 036024 256 GHRESILEASRRLEALF 272 (272)
Q Consensus 256 ~~~~~i~~~l~~l~~~l 272 (272)
.+++++++++++|++++
T Consensus 380 i~~eei~~~~~~l~~~l 396 (404)
T COG4992 380 ITEEEIDEALDALERAL 396 (404)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 69999999999998764
No 217
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=1.4e-15 Score=131.86 Aligned_cols=170 Identities=16% Similarity=0.238 Sum_probs=110.8
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+...| +++.++......+.--+ .+++|+|++++|+||||.+++ +++|+++|+++
T Consensus 104 D~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i--~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~ 178 (398)
T PRK08249 104 DRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEI--AKGCDLLYLETPTNPTLKIVD---IERLAAAAKKV 178 (398)
T ss_pred CEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhc--CCCCeEEEEECCCCCCCccCC---HHHHHHHHHHc
Confidence 55666555443 223355677 77766542111111112 257899999999999999988 88899999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|....... ++ ... .+ ++++|+||.+|.+|.++ |++++++++ .+.+...+.....
T Consensus 179 gi~livD~t~a~~~~~~---~l-~~~--~D--ivv~S~sK~l~g~~~~~gG~vv~~~~l--------~~~l~~~~~~~g~ 242 (398)
T PRK08249 179 GALVVVDNTFATPINQN---PL-ALG--AD--LVIHSATKFLSGHADALGGVVCGSKEL--------MEQVYHYREINGA 242 (398)
T ss_pred CCEEEEECCcCccccCC---ch-hhC--CC--EEeccCceecCCCCCceEEEEECCHHH--------HHHHHHHHHhcCC
Confidence 99999999998543221 22 121 22 78899999998667665 666666555 5555555544444
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..+...+..+.+-+ +.+..+.++.++++..+.+.|+++
T Consensus 243 ~~s~~~a~l~l~~l-----~tL~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 243 TMDPMSAYLILRGM-----KTLKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred CCCHHHHHHHHhCc-----chHHHHHHHHHHHHHHHHHHHHcC
Confidence 45555444433333 334556677889999999999986
No 218
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.71 E-value=7.3e-16 Score=134.95 Aligned_cols=208 Identities=15% Similarity=0.092 Sum_probs=133.8
Q ss_pred CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-..+...|. .++++.+++|.++|++||+++|+||++.++...+.........-.+| +.++||.+|..|
T Consensus 198 ~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PD----i~t~~K~l~~~G 273 (425)
T PRK09264 198 LPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPD----IVTLSKSISGYG 273 (425)
T ss_pred ceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCC----EEEeccccCCCc
Confidence 3556655555666776 56888999999999999999999999987644443222222222344 236799998449
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 199 (272)
+++|+++++++. . .+.......+++.++++..++.+.+.....+ .+..++++++.+++++.|+++
T Consensus 274 ~pigav~~~~~i-~--------~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~ 342 (425)
T PRK09264 274 LPMALVLIKPEL-D--------VWKPGEHNGTFRGNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKY 342 (425)
T ss_pred cceEEEEEchhh-h--------ccCCCccCCCCCCCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999998775 1 1111122334456667766666666322111 345666677777777766553
Q ss_pred C-CeEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 200 G-IKVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 200 g-~~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+ +.......|.+.++.++... ...+...++++ ||.+.+...+ ...+|++. ..+++++++++++|++++
T Consensus 343 ~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~-Gv~~~~~~~~----~~~lr~~p~l~~t~~ei~~~~~~l~~~l 414 (425)
T PRK09264 343 PGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFEN-GLIIETSGPE----DEVVKLLPPLTIDEEELEEGLDILEEAV 414 (425)
T ss_pred CCceecceecccEEEEEecChHHHHHHHHHHHHC-CCEEeccCCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 2 21112235788899987432 34555555555 9999775322 36788884 468999999999998764
No 219
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.71 E-value=1.1e-15 Score=132.03 Aligned_cols=170 Identities=17% Similarity=0.257 Sum_probs=111.2
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+...| +++.++.+....+.-.+ .+++++|++.+|+||+|.+.+ +++|.++|+++
T Consensus 94 d~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i--~~~tklV~le~p~np~g~~~d---l~~I~~la~~~ 168 (380)
T TIGR01325 94 DHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAV--KPNTKLVFVETPSNPLGELVD---IAALAELAHAI 168 (380)
T ss_pred CEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhc--CCCceEEEEECCCCCCCeeeC---HHHHHHHHHHc
Confidence 55666544332 334566788 88888775211111111 257899999999999999976 89999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|....... ++ ... ..+++.|++|.++.+|.++ |+++++++. .+.+.........
T Consensus 169 gi~livD~a~~~~~~~~---pl-~~g----~Divv~S~sK~l~g~g~~~gG~vv~~~~~--------~~~l~~~~~~~g~ 232 (380)
T TIGR01325 169 GALLVVDNVFATPVLQQ---PL-KLG----ADVVVYSATKHIDGQGRVMGGVIAGSEEL--------MAEVAVYLRHTGP 232 (380)
T ss_pred CCEEEEECCCcccccCC---ch-hhC----CCEEEeeccceecCCCCeEEEEEEeCHHH--------HHHHHHHHHhhCC
Confidence 99999999997533221 22 221 1288889999998677776 677777665 4455544433333
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..++.... .+++ +.+.+..+.++..+++..+.+.|+++
T Consensus 233 ~~~p~~a~---~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 233 AMSPFNAW---VLLK--GLETLSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred CCCHHHHH---HHHh--ccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 23333322 2222 23444667788888999999999987
No 220
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=7.9e-16 Score=135.36 Aligned_cols=206 Identities=17% Similarity=0.154 Sum_probs=136.6
Q ss_pred CCceEEEEecCCCcc-ccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSPNNPT-GHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p~npt-G~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.+++ ..|-+.. |.. .+++.+++|.++|++||+++|.||++.++...+...........+|.+ +++|.+|
T Consensus 218 ~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv----~~gK~l~- 291 (443)
T PRK06058 218 DNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLI----TTAKGIA- 291 (443)
T ss_pred CceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEE----EEccccc-
Confidence 3455555 4564444 444 357889999999999999999999999875544322222223334432 4589998
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-- 199 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 199 (272)
.|+++|+++++++. .+.+.......+++.+++++.|+.+.++.... +...++.+++.+++++.|+++
T Consensus 292 ~G~Pi~av~~~~~i--------~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~ 360 (443)
T PRK06058 292 GGLPLSAVTGRAEI--------MDAPHPGGLGGTYGGNPVACAAALAAIETIEE---DDLVARARQIEALMTDRLRALAA 360 (443)
T ss_pred CCCccEEEEEcHHH--------HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999998887 33333333445667899999999999873222 345667777777888887764
Q ss_pred --CCe-EecCCCceEEEeecCCC----Ch----HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHH
Q 036024 200 --GIK-VYGGINAPYVWAHFPGR----KS----WDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASR 266 (272)
Q Consensus 200 --g~~-~~~~~~~~~~~i~l~~~----~~----~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~ 266 (272)
++. -..+ .|.++.+.+... .+ ..+...+++ +||.+.++..++ +.+|+. +..++++++++++
T Consensus 361 ~~~~i~~vrg-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~~~~~~~~~----~~lr~~Ppl~~t~~~i~~~~~ 434 (443)
T PRK06058 361 EDDRIGDVRG-RGAMIAIELVKPGTTEPDAELTKALAAAAHA-AGVIVLTCGTYG----NVIRLLPPLVIGDELLREGLD 434 (443)
T ss_pred hCCcEEeeec-cceEEEEEEecCCCCCCcHHHHHHHHHHHHH-CCeEEeccCCCC----CEEEEECCCccCHHHHHHHHH
Confidence 321 1232 355555555311 11 223444444 599998865442 589997 5679999999999
Q ss_pred HHHHhC
Q 036024 267 RLEALF 272 (272)
Q Consensus 267 ~l~~~l 272 (272)
+|++++
T Consensus 435 ~l~~~l 440 (443)
T PRK06058 435 VLEAAL 440 (443)
T ss_pred HHHHHH
Confidence 998864
No 221
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.71 E-value=9.4e-16 Score=130.66 Aligned_cols=242 Identities=13% Similarity=0.114 Sum_probs=162.5
Q ss_pred cccccCccc-chHHhcccceeEEeecCCCC----CcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 6 SVIVGQAGD-LEDEVGKYCNIEYLECGPGN----NFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~----~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
++..+.|+. +...++.+|-+..+..++.. ...++ ++..+++++|.+++..|.||+..+ ++++.+++
T Consensus 85 ~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~--------~l~~~~~~ 156 (349)
T TIGR01364 85 YIVTGAWSKKAAKEAKKYGVVNVVASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR--------ELPDVKNA 156 (349)
T ss_pred EEECCHHHHHHHHHHHHhCCcEEEeccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc--------eecccCCC
Confidence 344566666 77777888854445543222 22222 333468999999999999999764 55666899
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcch--HHHHHhhh--hhcc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV--INDFNRII--CTCF 155 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~ 155 (272)
++++|.+.+. ++.+..+..+ + +++.|..|.+|.|| +|.++.+++.+....+.. ...+.... ....
T Consensus 157 l~iVDavss~---g~~~id~~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (349)
T TIGR01364 157 PLVADMSSNI---LSRPIDVSKF----G--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMY 225 (349)
T ss_pred eEEEEccccc---cCccCCHHHc----c--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCC
Confidence 9999999875 3333444443 2 88889999999888 799999888754321211 01111111 2233
Q ss_pred CCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCCC-ChHHHHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPGR-KSWDVFAEI 228 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~~-~~~~~~~~l 228 (272)
.+++.....++.++++..... .++++.++.+++++++++.|+++ |+..... .....+.+.+++. ...++...
T Consensus 226 ~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~- 304 (349)
T TIGR01364 226 NTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKE- 304 (349)
T ss_pred CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHH-
Confidence 467888888888888744444 57999999999999999999999 6644421 1224566777643 22344344
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+.+.|+++.+|.. ..+.+|+|+ +++++|+++++++|+++
T Consensus 305 ~~~~Gi~~~~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~ 345 (349)
T TIGR01364 305 AEERGLVSLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEF 345 (349)
T ss_pred HHHCCCcccCCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHH
Confidence 4556998877764 136899996 56899999999999875
No 222
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.70 E-value=9.8e-16 Score=132.33 Aligned_cols=245 Identities=14% Similarity=0.076 Sum_probs=157.7
Q ss_pred cccccCccc-chHHh-cccc--eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 6 SVIVGQAGD-LEDEV-GKYC--NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~-~~~g--~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
++..+.|+. +.... +++| +++.++.++ +..+|+++...++.+.+++.+|.||...+ +++|++ +++|+++
T Consensus 95 vi~~g~f~~~~~~~~~~~~g~~~v~~~~~~~--g~~~d~~~i~~~~~V~~~h~~t~tG~~~p---i~~I~~--~~~g~~~ 167 (378)
T PRK03080 95 HLAWESFGSKWATDVVKQLKLEDPRVLEADY--GSLPDLSAVDFDRDVVFTWNGTTTGVRVP---VARWIG--ADREGLT 167 (378)
T ss_pred EEEeCHHHHHHHHHHHhhcCCCCceEeccCC--CCCCCHhhcCCCCCEEEEecCCccceecc---chhhcc--ccCCCeE
Confidence 334344444 33322 3444 667777653 33455555555778999999999999988 777777 7789999
Q ss_pred EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCcchH-----------H---H
Q 036024 82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVI-----------N---D 146 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~-----------~---~ 146 (272)
++|.+++. +..+..+..+ -+++.|.+|.++. +| +|+++.+++.+....+... . .
T Consensus 168 vVDa~qs~---G~~pidv~~i------D~~~~s~~K~l~~P~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 236 (378)
T PRK03080 168 ICDATSAA---FALPLDWSKL------DVYTFSWQKVLGGEGG--HGMAILSPRAVERLESYTPARPIPKFFRLTKGGKA 236 (378)
T ss_pred EEeccccc---ccCCCCHHHC------cEEEEehhhhCCCCCc--eEEEEECHHHHHhhhcccCCCCCchhheeccchHH
Confidence 99999875 2223333332 2889999999863 66 7999999877533111100 0 0
Q ss_pred HH-hhhhhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-CeEecC----CCceEEEeecCC-
Q 036024 147 FN-RIICTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-IKVYGG----INAPYVWAHFPG- 218 (272)
Q Consensus 147 ~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~----~~~~~~~i~l~~- 218 (272)
.. .+...+..+++..+..++.+.++..... ..+++.++.+++.+++++.|++++ +.+..+ .++..+.+.+++
T Consensus 237 ~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~ 316 (378)
T PRK03080 237 IENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA 316 (378)
T ss_pred hhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc
Confidence 11 1112233445666665545555533232 468889999999999999999885 555431 123466677765
Q ss_pred --CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 219 --RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 219 --~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
..+.+...+++++ ||.+..|.... ..+.+|+|+ +++++|++.+++.|+++
T Consensus 317 ~~~~~~~~~~~l~~~-~i~v~~g~~~~--~~~~vRis~~~~~t~~di~~l~~al~~~ 370 (378)
T PRK03080 317 QAAVDAAAVAKLLRE-NGAVDIEPYRD--APNGLRIWCGPTVEPADVEALTPWLDWA 370 (378)
T ss_pred hHHHHHHHHHHHHHc-CCeeccccccC--CCCcEEEecCCCCCHHHHHHHHHHHHHH
Confidence 2344566677766 88887765322 347899995 67999999999999875
No 223
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.70 E-value=2.3e-15 Score=130.65 Aligned_cols=160 Identities=14% Similarity=0.180 Sum_probs=108.0
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
+...++..| +++.++......+.--+ .+++++|++.+|+||||.+.+ +++|+++|+++++++|+|++|......
T Consensus 126 ~~~~~~~~G~~v~~vd~~d~~~l~~ai--~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~ 200 (403)
T PRK07810 126 CNEILPRWGVETVFVDGEDLSQWEEAL--SVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQ 200 (403)
T ss_pred HHHHHHHcCcEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 445667778 88888753111111111 268999999999999999976 999999999999999999999753332
Q ss_pred CCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS 172 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 172 (272)
. ++ ... ..+++.|++|.++..|.++ |+++++++.+ ...+...........+...+..+.+.++
T Consensus 201 ~---~~-~~g----aDivv~S~tK~l~g~g~~~gG~v~~~~~~~-------~~~l~~~~~~~g~~~s~~~a~l~l~~L~- 264 (403)
T PRK07810 201 R---GL-PLG----ADVVVYSGTKHIDGQGRVLGGAILGDREYI-------DGPVQKLMRHTGPALSAFNAWVLLKGLE- 264 (403)
T ss_pred C---hh-hcC----CcEEEccCCceecCCcCceeEEEEeChHHH-------HHHHHHHHHHhCCCCCHHHHHHHHhccC-
Confidence 1 11 221 1288999999998678786 7777777652 2233333333333355555554444443
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 173 EGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
.+..+.++..+++..+.+.|+++
T Consensus 265 ----tl~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 265 ----TLALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHhcC
Confidence 44667788888888888999886
No 224
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.69 E-value=1.3e-15 Score=133.54 Aligned_cols=205 Identities=17% Similarity=0.167 Sum_probs=131.1
Q ss_pred CCceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.+|++......+|.+.+ ++.+++|.++|++|++++|+||+|.++..++ ......+...+| +.++||.+| .
T Consensus 196 ~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~~~~~~~~~~pD----i~~~gK~l~-~ 269 (426)
T PRK00062 196 DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-GGAQGYYGVTPD----LTTLGKIIG-G 269 (426)
T ss_pred CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-ccHHHHhCCCcc----hHhhhhHhh-C
Confidence 35666666644555888876 7789999999999999999999998773332 211222222233 358999998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHH---hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH--
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFN---RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA-- 197 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~-- 197 (272)
|+++|+++++++. .+.+. .....++.+.+++.+.++.+.++.... ++..++.+++.+++++.|+
T Consensus 270 G~p~ga~~~~~~i--------~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~~~~~~~~~~~~~~~~l~~~ 338 (426)
T PRK00062 270 GLPVGAFGGRREI--------MEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE---PGFYEELEALTKRLAEGLKEA 338 (426)
T ss_pred CCcceeeeEHHHH--------HHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHH
Confidence 9999999888877 44442 122333445788888888888873222 1244445555555555554
Q ss_pred --hCCCeEecCCCceEEEeecCCC-----------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHH
Q 036024 198 --SLGIKVYGGINAPYVWAHFPGR-----------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESI 261 (272)
Q Consensus 198 --~~g~~~~~~~~~~~~~i~l~~~-----------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i 261 (272)
+.++.......|.++.+.+... + ...+...+++ +||.+.|.. .+.+++++..+++|+
T Consensus 339 ~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~Gv~v~~~~------~~~~~~~~~~t~~ei 411 (426)
T PRK00062 339 AKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLD-EGVYLAPSQ------FEAGFVSAAHTDEDI 411 (426)
T ss_pred HHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHH-CCeEeecCC------cCceeeeccCCHHHH
Confidence 4465442222455555555311 1 1345555554 599997642 235678887899999
Q ss_pred HHHHHHHHHhC
Q 036024 262 LEASRRLEALF 272 (272)
Q Consensus 262 ~~~l~~l~~~l 272 (272)
++++++|++++
T Consensus 412 ~~~~~~l~~~l 422 (426)
T PRK00062 412 EKTLEAARKAF 422 (426)
T ss_pred HHHHHHHHHHH
Confidence 99999998763
No 225
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.69 E-value=3.1e-15 Score=129.02 Aligned_cols=133 Identities=11% Similarity=0.269 Sum_probs=95.7
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~ 122 (272)
+++|+|++++|+||||.+++ +++|+++|+++++++|+|++|....... ++ .+. .+ ++++|+||.++ .+
T Consensus 135 ~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~---pl-~~g--aD--ivv~S~sK~l~G~~ 203 (382)
T TIGR02080 135 QKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN---PL-ALG--AD--LVLHSCTKYLNGHS 203 (382)
T ss_pred cCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC---ch-hhC--CC--EEEeecceeccCCC
Confidence 57899999999999999988 7889999999999999999997543221 22 221 12 88999999885 57
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
+++.|+++++++.+ .+.+...+.......++.....+. .+.+.+..+.++..+++..+.+.|+.+
T Consensus 204 ~~~~G~i~~~~~~~-------~~~l~~~~~~~g~~~sp~~a~l~l-----r~l~tl~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 204 DVIAGAVIAKDPQV-------AEELAWWANNLGVTGGAFDSYLTL-----RGLRTLVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred CceeEEEEeCCHHH-------HHHHHHHHHccCCCCCHHHHHHHH-----cccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 88999988755442 555555554444445555433222 233455666778889999999999986
No 226
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.69 E-value=2.2e-15 Score=130.45 Aligned_cols=168 Identities=19% Similarity=0.248 Sum_probs=108.7
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...+...| +++.++++.... +++ .+++++|++++|+||||.+.+ +++|+++|+
T Consensus 99 d~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~----l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~ 171 (391)
T TIGR01328 99 DHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEE----VKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAH 171 (391)
T ss_pred CEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHH----HHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHH
Confidence 55666665332 344456678 888887752111 222 268899999999999999987 888999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhh-
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICT- 153 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~- 153 (272)
++|+++|+|++|...... .++ ... .+ +++.|++|.+|.+|.++ |++++++++ ++.+......
T Consensus 172 ~~gi~livD~a~a~~~~~---~~~-~~g--~D--ivv~S~sK~lgg~g~~~gG~v~~~~~l--------i~~l~~~~~~~ 235 (391)
T TIGR01328 172 SQGVKVIVDNTFATPMLT---NPV-ALG--VD--VVVHSATKYIGGHGDVVAGLICGKAEL--------LQQIRMVGIKD 235 (391)
T ss_pred HcCCEEEEECCCchhccC---Cch-hcC--CC--EEEccccccccCCCCceEEEEEcCHHH--------HHHHHHHHHHh
Confidence 999999999999853322 122 111 12 88899999998788774 666666665 4444432211
Q ss_pred -ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 154 -CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 154 -~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
.....+......+...+ +.+..+.++.+++++.+.+.|+++
T Consensus 236 ~~g~~l~~~~a~l~l~~L-----~tl~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 236 MTGSVISPFDAWLILRGL-----KTLNIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred CCCCCCCcHHHHHHHhCc-----CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 12223333333223222 233566788889999999999886
No 227
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=8.4e-15 Score=126.82 Aligned_cols=237 Identities=15% Similarity=0.204 Sum_probs=147.3
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...++..| +++.++.+... ++++ .+++++|++++|+||||.+.+ +++|.++|+
T Consensus 93 d~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~----~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~ 165 (390)
T PRK08064 93 DHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLE----EVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAK 165 (390)
T ss_pred CEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHH----HHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHH
Confidence 56666665332 224456678 88888874211 1222 268899999999999999976 889999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++++++|+|++|...... .++ .+. ..+++.|++|.++ .+|...|+++++++.+ .+.+.......
T Consensus 166 ~~g~~vvvD~a~~~~~~~---~~~-~~g----~Divv~S~tK~~~G~~~~laG~~v~~~~~~-------~~~l~~~~~~~ 230 (390)
T PRK08064 166 AIGCLTFVDNTFLTPLLQ---KPL-DLG----ADVVLHSATKFLAGHSDVLAGLAVVKDEEL-------AQKLYFLQNSF 230 (390)
T ss_pred HcCCEEEEECCCCccccc---Cch-hhC----CcEEEeecceeccCCccceeEEEEeCCHHH-------HHHHHHHHHhc
Confidence 999999999998753221 122 221 2388999999985 3455678877765331 55555554433
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-C-eEecC----------------CCceEEEeec
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-I-KVYGG----------------INAPYVWAHF 216 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~----------------~~~~~~~i~l 216 (272)
.. ....+.+.. .+ .+.+.+..+.++..+++..+.+.|++++ + +++.| ..|..+.+++
T Consensus 231 g~--~~~~~~a~l-~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~ 305 (390)
T PRK08064 231 GA--VLGVQDCWL-VL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTL 305 (390)
T ss_pred CC--CCCHHHHHH-HH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEE
Confidence 32 222233232 22 3334567788888999999999999863 1 12111 1345677788
Q ss_pred CCCChHHHHHHHHHhcCe---EeeCC------------CCCCC---------CCCCeEEEEccC--CHHHHHHHHHHHHH
Q 036024 217 PGRKSWDVFAEILEKTHI---TTVPG------------SGFGP---------GGEEYIRISGFG--HRESILEASRRLEA 270 (272)
Q Consensus 217 ~~~~~~~~~~~ll~~~gi---~v~~g------------~~~~~---------~~~~~~R~s~~~--~~~~i~~~l~~l~~ 270 (272)
.+ .+....+++..++ .+.-| +++.. -..+.+|+|++. +++.++.+.++|++
T Consensus 306 ~~---~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 306 QS---EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred CC---HHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 63 2345566666676 44445 22221 115789999743 55556666666654
No 228
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.69 E-value=9.2e-15 Score=126.19 Aligned_cols=133 Identities=12% Similarity=0.241 Sum_probs=100.2
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~ 122 (272)
+++|+|++++|+||||.+++ +++|.++|+++++++|+|++|..... ..++ .+. .| ++++|++|.++ .+
T Consensus 136 ~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~---~~pl-~~g--aD--ivv~S~tK~l~G~~ 204 (386)
T PRK08045 136 EKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL---QNPL-ALG--AD--LVLHSCTKYLNGHS 204 (386)
T ss_pred cCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc---CCch-hhC--CC--EEEeecceeccCCC
Confidence 68899999999999999988 78888999999999999999975432 1222 221 12 89999999885 56
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
+.+.|+++++++.+ .+.+...........++..+..+...++. +..+.++..+++..+.+.|+.+
T Consensus 205 d~~~G~vi~~~~~~-------~~~l~~~~~~~g~~~~p~~~~l~~rgl~t-----l~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 205 DVVAGVVIAKDPDV-------VTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred CceeEEEEeCcHHH-------HHHHHHHHHhcCCCCCHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHcC
Confidence 78899988754432 45555455555555677766666666653 5778899999999999999987
No 229
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.68 E-value=5.7e-15 Score=127.80 Aligned_cols=171 Identities=19% Similarity=0.231 Sum_probs=107.4
Q ss_pred cccccccCccc--ch---HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD--LE---DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~--~~---~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +. ..+...| +++.++......+.-.+ .+++|+|++++|+||||.+.+ +++|+++|+++
T Consensus 101 d~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i--~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~ 175 (388)
T PRK07811 101 DHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAI--TPRTKLIWVETPTNPLLSITD---IAALAELAHDA 175 (388)
T ss_pred CEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhc--CcCCeEEEEECCCCCcceecC---HHHHHHHHHHc
Confidence 56666655444 22 2233456 66666653111111111 268999999999999998755 99999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
++++|+|++|...... .++ ... .+ +++.|++|.++.+| .+.||++++++.+ .+.+.........
T Consensus 176 gi~lIvD~a~a~~~~~---~p~-~~g--aD--ivv~S~sK~l~g~~~~~gG~vv~~~~~l-------~~~~~~~~~~~g~ 240 (388)
T PRK07811 176 GAKVVVDNTFASPYLQ---QPL-ALG--AD--VVVHSTTKYIGGHSDVVGGALVTNDEEL-------DEAFAFLQNGAGA 240 (388)
T ss_pred CCEEEEECCCCccccC---Cch-hhC--Cc--EEEecCceeecCCCCcEEEEEEECCHHH-------HHHHHHHHHhcCC
Confidence 9999999999754322 122 121 12 89999999998544 5679988876542 3444433333233
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..+......+...+ +.+..+.++.++++..+.+.|+++
T Consensus 241 ~~s~~~a~l~~~~L-----~tl~~R~~~~~~na~~la~~L~~~ 278 (388)
T PRK07811 241 VPGPFDAYLTLRGL-----KTLAVRMDRHSENAEAVAEFLAGH 278 (388)
T ss_pred CCCHHHHHHHHhcc-----CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 23333322222222 334667777889999999999987
No 230
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.68 E-value=3.4e-15 Score=131.25 Aligned_cols=207 Identities=14% Similarity=0.084 Sum_probs=136.4
Q ss_pred CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
.++.++++...++..| ..++++.+++|.++|++||+++|.||++.++...+...........+|.+ +++|.+| .
T Consensus 205 ~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gK~l~-~ 279 (442)
T TIGR00709 205 DKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFV----VMSKAVG-G 279 (442)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEE----EEccccc-C
Confidence 4566666664444445 55799999999999999999999999999886665444433444344532 2799998 6
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+++|+++++++. .. +.......+++.+++++.|+.+.++.... +...++.+++.+++++.|+++
T Consensus 280 G~Pigav~~~~~~-~~--------~~~~~~~~T~~gnpla~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~ 347 (442)
T TIGR00709 280 GLPLAVLLIAPEF-DA--------WQPAGHTGTFRGNQLAMVTGTEALNYWKD---DNLAQNAQERGERITSFLDDMIKE 347 (442)
T ss_pred CcccEEEEEchHH-hc--------cCCCcCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998773 21 11112345666899999999999873222 345567777777777777654
Q ss_pred -CCeEecCCCceEEEeecCCCC---------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHH
Q 036024 200 -GIKVYGGINAPYVWAHFPGRK---------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESI 261 (272)
Q Consensus 200 -g~~~~~~~~~~~~~i~l~~~~---------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i 261 (272)
++...--..|.++.+.+.... ...+...++ ++|+.+.+.... .+.+|+. +..|++|+
T Consensus 348 ~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~----~~~l~~~Ppl~it~~ei 422 (442)
T TIGR00709 348 HPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGLLLETGGRE----GEVFRLLCPITIDQEEC 422 (442)
T ss_pred CCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCeEEeecCCC----CCEEEEECCCCCCHHHH
Confidence 221111124666667663210 122334444 459998753211 3678887 45699999
Q ss_pred HHHHHHHHHhC
Q 036024 262 LEASRRLEALF 272 (272)
Q Consensus 262 ~~~l~~l~~~l 272 (272)
++++++++++|
T Consensus 423 ~~~~~~l~~~l 433 (442)
T TIGR00709 423 EEGISRFKQAV 433 (442)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 231
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.68 E-value=3.6e-15 Score=129.62 Aligned_cols=168 Identities=17% Similarity=0.248 Sum_probs=110.0
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...+...| +++.++.+.... +++ .+++|+|++.+|+||||.+.+ +++|+++|+
T Consensus 105 d~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~----l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~ 177 (403)
T PRK07503 105 DEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAA----LKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAH 177 (403)
T ss_pred CEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHH----HHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHH
Confidence 56667665443 223455678 888887742111 222 268999999999999999977 899999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhh--hh
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRI--IC 152 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~ 152 (272)
++|+++|+|++|...... .++ .... .++++|+||.+|.+| .+.|+++.++++ .+++... ..
T Consensus 178 ~~gi~lIvD~a~a~~~~~---~~l-~~g~----Di~v~S~tK~l~g~gd~~gG~v~~~~~l--------~~~l~~~~~~~ 241 (403)
T PRK07503 178 GAGAKVVVDNTYCTPYLQ---RPL-ELGA----DLVVHSATKYLGGHGDITAGLVVGGKAL--------ADRIRLEGLKD 241 (403)
T ss_pred HcCCEEEEECCCcccccC---Cch-hhCC----CEEEccccccccCCCceeEEEEEcCHHH--------HHHHHhhhHHh
Confidence 999999999999853221 222 2211 289999999998655 778888876665 4444422 22
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
......+......+.+.+ +.+..+.++..+++..+.+.|+++
T Consensus 242 ~~g~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 242 MTGAVMSPFDAFLLMRGL-----KTLALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred CcCCCCCHHHHHHHHcCc-----chHHHHHHHHHHHHHHHHHHHHhC
Confidence 223334444433333322 344556666678899999999876
No 232
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.68 E-value=2.5e-15 Score=128.72 Aligned_cols=243 Identities=15% Similarity=0.105 Sum_probs=163.7
Q ss_pred cccccCccc-chHHhcccceeEEeecCCCCCc--ccCCCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 6 SVIVGQAGD-LEDEVGKYCNIEYLECGPGNNF--FPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~--~~dl~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
+++.+.|+. +.+.++++|....+..++..+. .+++++ .++++++.+++..|.||+..+ ++.+| +++
T Consensus 96 ~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~i------~g~ 167 (360)
T PRK05355 96 YVDTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPDT------GDV 167 (360)
T ss_pred EEECCHHHHHHHHHHHHhCCceEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccccc------CCC
Confidence 445566666 7778888894355555532232 223222 257899999999999999974 35555 899
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcch--HHHHHhhh--hhcc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV--INDFNRII--CTCF 155 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~ 155 (272)
++++|.+.+. ++.+..+..+ + +++.|..|.+|.+| +|.++++++.+....+.. .-.+.... ..+.
T Consensus 168 l~vVDavss~---g~~~idv~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 236 (360)
T PRK05355 168 PLVADMSSDI---LSRPIDVSKF----G--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMY 236 (360)
T ss_pred cEEEEcCccc---cCccCCHHHc----c--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcCCcc
Confidence 9999999875 3333444443 2 88889999999778 799999998864422211 11111111 2234
Q ss_pred CCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCe-EecC---CCceEEEeecCCC-ChHHHHHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIK-VYGG---INAPYVWAHFPGR-KSWDVFAEIL 229 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~---~~~~~~~i~l~~~-~~~~~~~~ll 229 (272)
.+++....+++.++++..... .++++.++.++.++++++.|+++|+. ...+ .....+.+.+++. ...++...+.
T Consensus 237 ~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~ 316 (360)
T PRK05355 237 NTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEAK 316 (360)
T ss_pred CCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHHH
Confidence 668888888888888754445 57999999999999999999999752 2121 2235577777753 2234444444
Q ss_pred HhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 230 EKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+.|+.+.+|.. ..+.+|+|+ +++.+|++++++.|++++
T Consensus 317 -~~Gi~~~~~~~----~~g~vRiS~~~~nt~eei~~l~~~l~~~~ 356 (360)
T PRK05355 317 -AAGLVGLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFE 356 (360)
T ss_pred -HCCCcccCCCC----ccCcEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 45998866653 247899996 568999999999998863
No 233
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.68 E-value=4.5e-15 Score=127.23 Aligned_cols=241 Identities=15% Similarity=0.127 Sum_probs=157.0
Q ss_pred ccccCccc-chHHhcccc-eeEEeecCCCCCc-c-cC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 7 VIVGQAGD-LEDEVGKYC-NIEYLECGPGNNF-F-PD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 7 ~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~-~-~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
++.+++.. +...+++.| +++.++.++++++ . +| .+..+++++|.+++.+|.||..++ ++++.+|+
T Consensus 93 i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~--------~i~~~~g~ 164 (355)
T cd00611 93 VVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD--------EVPDTGGV 164 (355)
T ss_pred EECCHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc--------eecccCCC
Confidence 44455544 444778889 8999988654334 2 33 222478999999999999999743 33445999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH--HHHh-hh-hhcc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN--DFNR-II-CTCF 155 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~--~~~~-~~-~~~~ 155 (272)
++++|.+.+. +..+..+..++ +...|..|.+|.+| +|.++++++.+....+.... .+.. .. ....
T Consensus 165 ~~~VDa~qs~---g~~~idv~~~~------~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (355)
T cd00611 165 PLVADMSSNI---LSRPIDVSKFG------VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLY 233 (355)
T ss_pred eEEEEccccc---cCCCCCHHHhC------EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCC
Confidence 9999999975 22233343332 45566899999888 79999988775432111000 1111 01 1124
Q ss_pred CCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhC-CCe-Ee-cC--CCceEEEeecCCC-ChHHHHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASL-GIK-VY-GG--INAPYVWAHFPGR-KSWDVFAEI 228 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~--~~~~~~~i~l~~~-~~~~~~~~l 228 (272)
.+++.....++.++++..... .++++.++.+++++++++.|+++ |+. .. .+ ..+..+.+++++. ...++...
T Consensus 234 ~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~~- 312 (355)
T cd00611 234 NTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEFLKE- 312 (355)
T ss_pred CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHHHHH-
Confidence 467777777777777643334 47899999999999999999998 853 21 11 1234577777753 12333333
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+.+.|+.+.++.. ..+.+|+|+ +++++|++++++.|+++
T Consensus 313 ~~r~G~~~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 313 AEAAGMIGLKGHR----SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HHHCCCcccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 3455998665553 246899996 45999999999999875
No 234
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=5.3e-15 Score=129.63 Aligned_cols=205 Identities=15% Similarity=0.090 Sum_probs=134.7
Q ss_pred CCceEEEEec-CCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCS-PNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~-p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.++++.. .++.+|... +++.+++|.++|++||+++|+||++.++...+...........+| +.+++|.++
T Consensus 198 ~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pD----i~~~~K~l~- 272 (423)
T PRK05964 198 GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPD----IMCLSKGLT- 272 (423)
T ss_pred CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCC----eeeeehhhh-
Confidence 4555666654 477778766 889999999999999999999999987654442222122222333 236799997
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHHh------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFNR------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
.| +++|+++++++. .+.+.. ....++++.++++..++.+.++.... +...++.+++.+++++
T Consensus 273 gG~~p~~av~~~~~i--------~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~ 341 (423)
T PRK05964 273 GGYLPLAATLCTAEI--------FEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED---EPVLERVAALSAGLAE 341 (423)
T ss_pred cCcccceEEEEcHHH--------HHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence 55 899998888877 333321 12233445778888877777763222 2355667777777777
Q ss_pred HHHhC-CCeEec--CCCceEEEeecCCCC----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHH
Q 036024 195 TLASL-GIKVYG--GINAPYVWAHFPGRK----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEAS 265 (272)
Q Consensus 195 ~L~~~-g~~~~~--~~~~~~~~i~l~~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l 265 (272)
.|+++ ...... ...|.++.+.+.... ...+...+.+ +||.+.+.. +.+|++. ..+++|+++++
T Consensus 342 ~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~-~Gv~v~~~~-------~~lR~~p~l~~t~edId~~v 413 (423)
T PRK05964 342 GLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALE-RGVLLRPLG-------NTIYLMPPYIITAEELDRIT 413 (423)
T ss_pred HHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHH-CCeEEEecC-------CEEEEeCCcccCHHHHHHHH
Confidence 77665 222111 124667777776432 3455555555 499997631 4799994 57999999999
Q ss_pred HHHHHhC
Q 036024 266 RRLEALF 272 (272)
Q Consensus 266 ~~l~~~l 272 (272)
++|++++
T Consensus 414 ~~l~~al 420 (423)
T PRK05964 414 DAIVEVA 420 (423)
T ss_pred HHHHHHH
Confidence 9998864
No 235
>PRK05968 hypothetical protein; Provisional
Probab=99.67 E-value=7.6e-15 Score=127.06 Aligned_cols=239 Identities=15% Similarity=0.108 Sum_probs=142.6
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+...| +++.++.+....+. +..+++|+|++.+|+||++ +..++++|+++|+++
T Consensus 103 d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~---~~i~~tklV~ie~pt~~~~---~~~dl~~i~~la~~~ 176 (389)
T PRK05968 103 DRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVA---KALPGAKLLYLESPTSWVF---ELQDVAALAALAKRH 176 (389)
T ss_pred CEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHH---HhcccCCEEEEECCCCCCC---cHHHHHHHHHHHHHc
Confidence 55666554333 234556678 88887654111111 1236789999987666655 557899999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhh-hcc
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIIC-TCF 155 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 155 (272)
++++|+|++|....... ++ ... . .+++.|++|.++.+| .+.|+++.++++ ++.+..... ...
T Consensus 177 gi~vivD~a~a~~~~~~---p~-~~g-~---Divv~S~tK~l~g~~~~~gG~i~~~~~~--------~~~l~~~~~~~~g 240 (389)
T PRK05968 177 GVVTMIDNSWASPVFQR---PI-TLG-V---DLVIHSASKYLGGHSDTVAGVVAGSKEH--------IARINAEAYPYLG 240 (389)
T ss_pred CCEEEEECCCcchhccC---ch-hcC-C---cEEEeeccccccCCCCeEEEEEEECHHH--------HHHHHHHHHHhCC
Confidence 99999999997644222 22 121 1 278889999998644 578988877776 444443222 122
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC-----------CCceEEEeecCC-CCh
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG-----------INAPYVWAHFPG-RKS 221 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-----------~~~~~~~i~l~~-~~~ 221 (272)
...+......+...++ .+..+.++..++++.+.+.|+++ ++. +..| ..+..+.+++++ ...
T Consensus 241 ~~~~~~~A~~~l~~L~-----tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~ 315 (389)
T PRK05968 241 AKLSPFEAWLLLRGLR-----TLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDV 315 (389)
T ss_pred CCCChHHHHHHHcccC-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHH
Confidence 2344444443333333 34666677778899999999987 553 3322 124467777763 233
Q ss_pred HHHHHHHHHhcCeEeeCCCCCC---C------------------CCCCeEEEEccC-CHHH-HHHHHHHHHH
Q 036024 222 WDVFAEILEKTHITTVPGSGFG---P------------------GGEEYIRISGFG-HRES-ILEASRRLEA 270 (272)
Q Consensus 222 ~~~~~~ll~~~gi~v~~g~~~~---~------------------~~~~~~R~s~~~-~~~~-i~~~l~~l~~ 270 (272)
.++. ..++..++.+.-|..+. | ...+.+|+|+.. ..+| ++.+.++|++
T Consensus 316 ~~f~-~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 316 RAFA-DALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred HHHH-HhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 3333 34455577776666554 1 014789999754 3333 4444444443
No 236
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=1.2e-14 Score=128.45 Aligned_cols=213 Identities=13% Similarity=0.080 Sum_probs=132.1
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
.+++++++. ++.+|...+ +++|.++|+++|+++++|++|.......+..+. ... +.-++++|.+|+++.|.
T Consensus 181 ~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~-~~~---~~D~l~~S~hK~l~GP~ 251 (452)
T PTZ00094 181 FRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPS-PFP---YADVVTTTTHKSLRGPR 251 (452)
T ss_pred hCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCC-CCC---CCcEEEcCCccCCCCCC
Confidence 367777664 335888877 788888999999999999999864443321111 111 11288999999773132
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhh-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIIC-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
.|++.++++.... +...+..... ....+++.....++.+.++.......++.++++.++++++.+.|.+.|++
T Consensus 252 --Gg~l~~~~~~~~~----l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~ 325 (452)
T PTZ00094 252 --SGLIFYRKKVKPD----IENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYD 325 (452)
T ss_pred --ceEEEEecccchH----HHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcE
Confidence 3887876654210 1111111111 11123444555555555553322345778899999999999999888988
Q ss_pred EecCC-CceEEEeecC--CCChHHHHHHHHHhcCeEe-eCCCCCCC--CCCCeEEEEc--cCC----HHHHHHHHHHHHH
Q 036024 203 VYGGI-NAPYVWAHFP--GRKSWDVFAEILEKTHITT-VPGSGFGP--GGEEYIRISG--FGH----RESILEASRRLEA 270 (272)
Q Consensus 203 ~~~~~-~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v-~~g~~~~~--~~~~~~R~s~--~~~----~~~i~~~l~~l~~ 270 (272)
+..+. ......+.+. +.+. +.+..+|+++||.+ .++..+.+ ..++.+|+|+ .++ ++|++++++.|++
T Consensus 326 v~~~~~~~~~~~v~~~~~~~~~-~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~ 404 (452)
T PTZ00094 326 LVTGGTDNHLVLVDLRPFGITG-SKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDR 404 (452)
T ss_pred EecCCCCCceEeecCCcCCCCH-HHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 87532 1334444554 4344 45556667789999 45544432 2357899995 344 8999999999887
Q ss_pred hC
Q 036024 271 LF 272 (272)
Q Consensus 271 ~l 272 (272)
++
T Consensus 405 ~~ 406 (452)
T PTZ00094 405 AV 406 (452)
T ss_pred HH
Confidence 53
No 237
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=6.7e-15 Score=129.34 Aligned_cols=206 Identities=15% Similarity=0.121 Sum_probs=134.9
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.+|++-..++..|.. .+++.+++|.++|++||+++|+||++.++...+...........+| +-+++|.+| .
T Consensus 206 ~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD----i~t~gK~l~-~ 280 (445)
T PRK08593 206 DEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD----LMSFGKSLA-G 280 (445)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC----Eeeeccccc-C
Confidence 456666666667777886 6888899999999999999999999987654443222222322344 337899998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+++|+++++++. .+.+.......+.+.++++..++.+.++.... +...++.+++.+++++.|+++
T Consensus 281 G~p~gav~~~~~i--------~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~ 349 (445)
T PRK08593 281 GMPMSAIVGRKEI--------MESLEAPAHLFTTGANPVSCAAALATIDMIED---ESLLQRSAEKGEYARKRFDQWVSK 349 (445)
T ss_pred CcccEEEEEcHHH--------HhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999887 33333222334555778888878888763322 345666777777777777653
Q ss_pred -CCeEecCCCceEEEeecCCC------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHH
Q 036024 200 -GIKVYGGINAPYVWAHFPGR------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRR 267 (272)
Q Consensus 200 -g~~~~~~~~~~~~~i~l~~~------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~ 267 (272)
++...-...|.++.+.+... + ...+...++++ ||.+.+.. .+.+|++. ..|++|+++++++
T Consensus 350 ~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~~------~~~lr~~p~l~~t~~~id~~~~~ 422 (445)
T PRK08593 350 YNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEH-GVVIIAVA------GNVLRFQPPLVITYEQLDTALNT 422 (445)
T ss_pred CCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHC-CeEEeccC------CCEEEEECCCccCHHHHHHHHHH
Confidence 22111112355555555310 1 23455555554 99986531 35789884 5699999999999
Q ss_pred HHHhC
Q 036024 268 LEALF 272 (272)
Q Consensus 268 l~~~l 272 (272)
+++++
T Consensus 423 l~~~l 427 (445)
T PRK08593 423 IEQAF 427 (445)
T ss_pred HHHHH
Confidence 98763
No 238
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.67 E-value=2.9e-16 Score=127.02 Aligned_cols=225 Identities=16% Similarity=0.177 Sum_probs=166.7
Q ss_pred cccccCccc-chHHhcccc-eeEEeecCCCCCcccC-------CCCCCCceEEEEe-cCCCccccCCCHHHHHHHHHHHH
Q 036024 6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-------LKGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-------l~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
+.++.|+|+ -...+...| .+..+..-...-..+| +.+.+.-..|++. ..|||||+-.+.+.+++|.++.+
T Consensus 149 I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~ 228 (427)
T KOG1411|consen 149 IYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIK 228 (427)
T ss_pred eeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhh
Confidence 456667777 445556666 5544433322122223 3344555566665 66999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCCC---CCccccCCCCCceEEEecCccccCCCccceeEE--EecccccccCCcchHHHHHhh
Q 036024 76 NNGSIIIFDSAYAAYVTDGCP---RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT--VVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~--~~~~~~~~~~~~~~~~~~~~~ 150 (272)
+.+.+-+.|.+|++|..+... ..+.-......++++..|++|.+|+-|-|+|.+ ++.++. ...++..++...
T Consensus 229 ~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad---~A~rV~SQlk~l 305 (427)
T KOG1411|consen 229 EKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDAD---EAKRVESQLKIL 305 (427)
T ss_pred hccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHH---HHHHHHHHHHHH
Confidence 999999999999998876432 222223334466899999999999999999994 554444 445667788888
Q ss_pred hhhccCCcchHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCCh
Q 036024 151 ICTCFNGASNIAQAGGLACLSSEGL-----EAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRKS 221 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~~ 221 (272)
...+.++++..+..++..++.+... ..++-+.+++..++..+.+.|...| |+....+-|+|++-.+..
T Consensus 306 iRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p--- 382 (427)
T KOG1411|consen 306 IRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP--- 382 (427)
T ss_pred hcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH---
Confidence 8888888999999999999986542 4577788899999999999998864 555666789999877753
Q ss_pred HHHHHHHHHhcCeEee
Q 036024 222 WDVFAEILEKTHITTV 237 (272)
Q Consensus 222 ~~~~~~ll~~~gi~v~ 237 (272)
+.+..|.+++.|++.
T Consensus 383 -eQv~~l~ke~~iYmT 397 (427)
T KOG1411|consen 383 -EQVDWLTKEYHIYLT 397 (427)
T ss_pred -HHHHHHHhhheeeec
Confidence 678889999999985
No 239
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.66 E-value=2.3e-14 Score=114.69 Aligned_cols=254 Identities=17% Similarity=0.142 Sum_probs=177.3
Q ss_pred cccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|+..+.|+. +.+..+++| ++.+++.+...+..++ +.+ .++++++++++....||+.-+ -+..+.++|++|++
T Consensus 97 v~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~ 174 (385)
T KOG2862|consen 97 VVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQD--LLAISGELCHKHEA 174 (385)
T ss_pred EEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccch--HHHHHHHHhhcCCe
Confidence 344566666 778889999 9999998877666555 222 389999999999999999843 25667788999999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC-ccceeEEEecccccccCCc-------chHHHH---H
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT-GVRLGWTVVPEELLFSSGF-------PVINDF---N 148 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~-g~r~G~~~~~~~~~~~~~~-------~~~~~~---~ 148 (272)
++++|.+-+- ++.+.-..++..+ +......|++|+| | ++-+..++....+... -+.+.. .
T Consensus 175 lllVD~VaSl---ggt~F~mDewgVD----vaytgSQKaL~aP~G--LsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~ 245 (385)
T KOG2862|consen 175 LLLVDTVASL---GGTEFEMDEWGVD----VAYTGSQKALGAPAG--LSIISFSDKALEAIRDRKTKPVSFYFDILRLGN 245 (385)
T ss_pred EEEEechhhc---CCccceehhhccc----EEEecchhhcCCCCC--cceeecCHHHHHHHhhccCCceEEEEeHHhhcc
Confidence 9999999764 4444445555432 5555558999864 5 3445554444211000 000000 0
Q ss_pred hhh-----hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC----ceEEEeecC-C
Q 036024 149 RII-----CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN----APYVWAHFP-G 218 (272)
Q Consensus 149 ~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~i~l~-~ 218 (272)
.+. ...+.+++....+.+.++|....++.+++.+++.+++.+.++..|+++|++...... .....+..| +
T Consensus 246 ~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~g 325 (385)
T KOG2862|consen 246 FWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYG 325 (385)
T ss_pred hhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCC
Confidence 001 234456788888888888887778899999999999999999999999987644222 112334455 6
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cC-CHHHHHHHHHHHHHhC
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FG-HRESILEASRRLEALF 272 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~-~~~~i~~~l~~l~~~l 272 (272)
.+..+....+..++++.+.-|. ++.....+||++ ++ +.|.++..++.|+.++
T Consensus 326 vDw~dVv~~~~~~~~vei~ggl--g~~~gKv~RIGl~gcna~~e~i~~v~~ll~~al 380 (385)
T KOG2862|consen 326 VDWKDVVAYAMSHYVVEIGGGL--GPTVGKVFRIGLLGCNANVEYIDNVVELLKLAL 380 (385)
T ss_pred CCHHHHHHHHHHhcCEEecccc--CCCcccEEEEEEeeccCCcHHHHHHHHHHHHHH
Confidence 7888999999999898885544 566678999995 33 7888988888887653
No 240
>PRK06541 hypothetical protein; Provisional
Probab=99.66 E-value=1.3e-14 Score=127.87 Aligned_cols=206 Identities=16% Similarity=0.172 Sum_probs=136.6
Q ss_pred CceEEEEecC-CCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSP-NNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+..+.+++.| ++++|.+.+ ++.+++|.++|+++|+++|+||++.++...+...........+| ++ +++|.+| .
T Consensus 220 ~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PD--iv--t~gK~l~-~ 294 (460)
T PRK06541 220 DTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPD--II--TCAKGIT-S 294 (460)
T ss_pred CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCC--EE--Eeccccc-C
Confidence 3445555666 999998865 88899999999999999999999976633332222222222344 22 5899998 8
Q ss_pred cc-ceeEEEecccccccCCcchHHHHHh----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024 123 GV-RLGWTVVPEELLFSSGFPVINDFNR----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 123 g~-r~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
|+ ++|+++++++. .+.+.. .....+.+.++++..++.+.++.... +...++++++.++|++.|+
T Consensus 295 G~~pigav~~~~~i--------~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~---~~~~~~~~~~g~~l~~~L~ 363 (460)
T PRK06541 295 GYSPLGAMIASDRL--------FEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER---EGLLDHVRDNEPAFRATLE 363 (460)
T ss_pred CccceeEEEEcHHH--------HHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence 87 99999999888 333322 12233555677887777777763222 3456788888889988888
Q ss_pred hC-CCeE---ecCCCceEEEeecCCC-------Ch--------HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cC
Q 036024 198 SL-GIKV---YGGINAPYVWAHFPGR-------KS--------WDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FG 256 (272)
Q Consensus 198 ~~-g~~~---~~~~~~~~~~i~l~~~-------~~--------~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~ 256 (272)
++ ...+ .. ..|.+..+.+... .. ..+...++++ ||.+.+. +.+...+||+. ..
T Consensus 364 ~l~~~~~v~~vr-g~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~g~~~lrl~Ppl~~ 437 (460)
T PRK06541 364 KLLDLPIVGDVR-GDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEA-GLYCRAD----DRGDPVVQLAPPLIS 437 (460)
T ss_pred HhhcCCCeEEEE-ecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhC-CeEEEec----CCCCCEEEEECCCCC
Confidence 76 2222 22 2466666666310 00 1234455554 9999762 12346799995 46
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
+++|+++++++|++++
T Consensus 438 t~~~id~~~~~l~~~l 453 (460)
T PRK06541 438 GQEEFDEIEQILRSVL 453 (460)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 241
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.65 E-value=1.5e-14 Score=124.85 Aligned_cols=227 Identities=16% Similarity=0.124 Sum_probs=139.8
Q ss_pred cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. ... .+...| +++.++......+.--+ .+++|++++++|+||||.+.+ +++|+++|+++
T Consensus 86 d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i--~~~tklv~le~psnptg~v~d---l~~I~~la~~~ 160 (378)
T TIGR01329 86 DEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAAL--GPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQ 160 (378)
T ss_pred CEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhc--CcCceEEEEECCCCCCCeeec---HHHHHHHHHHc
Confidence 55666654333 222 345578 88888874221221112 268999999999999999976 99999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|..... ..++ .+.. | +++.|++|.++. .+.+.|+++++++.. .+.+...+.....
T Consensus 161 g~~vivD~a~~~~~~---~~~l-~~g~--D--i~v~S~tK~l~G~~~~~~G~v~~~~~~~-------~~~~~~~~~~~G~ 225 (378)
T TIGR01329 161 NALVVVDNTMMSPLL---CNPL-ELGA--D--IVYHSATKFLAGHSDVMAGVLAVKGEEI-------AKKVYFLQNSTGS 225 (378)
T ss_pred CCEEEEECCCccccc---CChh-hcCC--c--EEEEecceeccCCccceeEEEEeCcHHH-------HHHHHHHHHhcCC
Confidence 999999999853211 1222 2221 2 899999998853 457789998866552 3445444432333
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEec----------------CCCceEEEeecCC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYG----------------GINAPYVWAHFPG 218 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~----------------~~~~~~~~i~l~~ 218 (272)
..++.... +.....+.+..+.++..++...+.+.|+++ .+ ++.. ...+..+.+++.+
T Consensus 226 ~~~~~~a~-----l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~ 300 (378)
T TIGR01329 226 GLAPFDCW-----LLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS 300 (378)
T ss_pred cCCHHHHH-----HHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC
Confidence 23333221 111223455677788888888888888875 22 1211 1134567778854
Q ss_pred CC-hHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccC
Q 036024 219 RK-SWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFG 256 (272)
Q Consensus 219 ~~-~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~ 256 (272)
.. ..++... ++..+|.++-|...+. -.++.+|+|+..
T Consensus 301 ~~~~~~~~~~-L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl 359 (378)
T TIGR01329 301 VALSKRLVEA-TKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI 359 (378)
T ss_pred HHHHHHHHHh-CcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc
Confidence 33 3344444 4777888877765430 014689999865
No 242
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.65 E-value=1.1e-14 Score=136.55 Aligned_cols=219 Identities=16% Similarity=0.121 Sum_probs=141.5
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-----CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-----GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKF 118 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-----~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 118 (272)
++++++.+++.+|-||.+.|.+.++.+.+.++.+ ++++++|.+++. +..+..+..+.. | ++..|++|.
T Consensus 191 ~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~---g~~piDv~~~~~--D--fl~~S~HK~ 263 (805)
T PLN02724 191 EAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC---GTSPPDLSRYPA--D--FVVVSFYKI 263 (805)
T ss_pred CCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc---CCCCCChhhcCC--C--EEEEeccee
Confidence 3567999999999999999965444333332222 368999999874 222334444432 2 889999999
Q ss_pred cC-CCccceeEEEecccccccCCcchHHH-----------H----H-hhhhhccCCcchHHHHHHHHhcccccHHHHHHH
Q 036024 119 SG-FTGVRLGWTVVPEELLFSSGFPVIND-----------F----N-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSV 181 (272)
Q Consensus 119 ~g-~~g~r~G~~~~~~~~~~~~~~~~~~~-----------~----~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 181 (272)
+| ..| +|+++++++......+..... + . .....-..+++..+..++.++++-......+++
T Consensus 264 ~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I 341 (805)
T PLN02724 264 FGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAI 341 (805)
T ss_pred ccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHH
Confidence 98 446 899998887632211110000 0 0 000111223555555555555542222245788
Q ss_pred HHHHHHHHHHHHHHHHhC-------CCeEecCC--------CceEEEeecCCCCh----HHHHHHHHHhcCeEeeCCCCC
Q 036024 182 VDYYKENTKILIDTLASL-------GIKVYGGI--------NAPYVWAHFPGRKS----WDVFAEILEKTHITTVPGSGF 242 (272)
Q Consensus 182 ~~~~~~~~~~l~~~L~~~-------g~~~~~~~--------~~~~~~i~l~~~~~----~~~~~~ll~~~gi~v~~g~~~ 242 (272)
.++.++..+++.+.|+++ +++++++. .+..+.+++.+.++ ...+..++.++||.++.|.+|
T Consensus 342 ~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~C 421 (805)
T PLN02724 342 AMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFC 421 (805)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeecccc
Confidence 899999999999999876 37777643 35677777764332 233667778889999999988
Q ss_pred CCC---------------------------------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 243 GPG---------------------------------GEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 243 ~~~---------------------------------~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
.+. ..+.+|+|+ ++|.+|++++++.|++.
T Consensus 422 a~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 422 NPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS 485 (805)
T ss_pred CchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence 632 138899996 67999999999999874
No 243
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.65 E-value=2.2e-14 Score=122.93 Aligned_cols=236 Identities=18% Similarity=0.130 Sum_probs=143.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...+...| +++.++.+++ .+.+|++. .++++++++++ |+|...+ +++|.++|++
T Consensus 59 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~ 131 (352)
T cd00616 59 DEVIVPSFTFVATANAILLLGATPVFVDIDPD-TYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKR 131 (352)
T ss_pred CEEEeCCcchHHHHHHHHHcCCeEEEEecCCC-cCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHH
Confidence 45565555444 556667788 9999998763 45555333 26788888864 6898766 8888999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+++++|+|++|....... ...+... .+ +.+.|++ |.++ +.+.|+++.+++.+ .+.+.......
T Consensus 132 ~~i~li~D~a~~~g~~~~-~~~~~~~---~d--~~~~S~~~~K~~~--~~~gg~~~~~~~~~-------~~~~~~~~~~~ 196 (352)
T cd00616 132 HGLPVIEDAAQALGATYK-GRKVGTF---GD--AGAFSFHPTKNLT--TGEGGAVVTNDEEL-------AERARLLRNHG 196 (352)
T ss_pred cCCeEEEECCCCCCCeEC-CEEcccC---cc--eeEEcCCCCCCCc--ccCceEEEECCHHH-------HHHHHHHHHcC
Confidence 999999999998532211 1111111 12 5666766 8884 22468888875331 33332222111
Q ss_pred ---------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC-----ceEEE
Q 036024 155 ---------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN-----APYVW 213 (272)
Q Consensus 155 ---------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-----~~~~~ 213 (272)
....+.+. ++.... ....+++..++.+++.+++++.|+++ |+++..+.. ...+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~--aa~~~~---~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~ 271 (352)
T cd00616 197 RDRDRFKYEHEILGYNYRLSEIQ--AAIGLA---QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYV 271 (352)
T ss_pred CCCCCCccccceeeeccCcCHHH--HHHHHH---HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEE
Confidence 11112221 122221 12344677788899999999999986 788765422 23455
Q ss_pred eecC---CCChHHHHHHHHHhcCeEeeCCCCCCCC----------------C-------CCeEEEEc--cCCHHHHHHHH
Q 036024 214 AHFP---GRKSWDVFAEILEKTHITTVPGSGFGPG----------------G-------EEYIRISG--FGHRESILEAS 265 (272)
Q Consensus 214 i~l~---~~~~~~~~~~ll~~~gi~v~~g~~~~~~----------------~-------~~~~R~s~--~~~~~~i~~~l 265 (272)
+.++ +....++...|. +.||.+.. .|.+. . .+.+|+++ ..+++|+++++
T Consensus 272 ~~~~~~~~~~~~~v~~~L~-~~gI~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~ 348 (352)
T cd00616 272 IRLDPEAGESRDELIEALK-EAGIETRV--HYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVI 348 (352)
T ss_pred EEECCcCCCCHHHHHHHHH-HCCCCeee--ecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHH
Confidence 5665 345566666654 55997642 23221 0 26799996 46999999999
Q ss_pred HHHH
Q 036024 266 RRLE 269 (272)
Q Consensus 266 ~~l~ 269 (272)
++|+
T Consensus 349 ~~l~ 352 (352)
T cd00616 349 EALR 352 (352)
T ss_pred HHhC
Confidence 8874
No 244
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.64 E-value=1.1e-14 Score=127.11 Aligned_cols=115 Identities=20% Similarity=0.334 Sum_probs=83.2
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.++ +...+...| +++.++.+. ++ +++ .+++++|++++|+||||.+.+ +++|+++|
T Consensus 97 d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d-----~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la 168 (418)
T TIGR01326 97 DNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDD-----PEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVA 168 (418)
T ss_pred CEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCC-----HHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHH
Confidence 55666554322 344556778 888887531 12 222 257899999999999999976 88999999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE 134 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~ 134 (272)
+++|+++|+|++|..... ..++ . .+..+++.|+||.+|.+|+|+||+++++.
T Consensus 169 ~~~~i~livD~t~~~~~~---~~~l-~----~g~Divv~S~sK~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 169 HAHGVPLIVDNTFATPYL---CRPI-D----HGADIVVHSATKYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred HHcCCEEEEECCCchhhc---CCch-h----cCCeEEEECccccccCCccceEEEEEecc
Confidence 999999999999974211 1111 1 12359999999999988999999998653
No 245
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=5.8e-14 Score=120.95 Aligned_cols=170 Identities=18% Similarity=0.241 Sum_probs=110.9
Q ss_pred cccccccCcc-cchH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAG-DLED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~-~~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+ .+.. .+...| ++..++.+....+.-.+ .+++|+|++++|+||||.+ .++++|+++|+++
T Consensus 101 D~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l--~~~TklV~lespsNPtg~v---~dl~~I~~la~~~ 175 (394)
T PRK09028 101 DHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELI--RPNTKVLFLESPGSITMEV---QDVPTLSRIAHEH 175 (394)
T ss_pred CEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCCcH---HHHHHHHHHHHHc
Confidence 5666666544 3332 345677 77766544222222112 2689999999999999877 5699999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++++|++|..... ..++ .+.. -+++.|.+|.+ |.++...|+++.+++. .+.+.........
T Consensus 176 g~~lvvD~t~a~p~~---~~Pl-~~Ga----Divv~S~tK~l~Gh~d~~~G~~~~~~~~--------~~~l~~~~~~~G~ 239 (394)
T PRK09028 176 DIVVMLDNTWASPIN---SRPF-EMGV----DISIQAATKYIVGHSDVMLGTATANEKH--------WDQLREHSYLMGQ 239 (394)
T ss_pred CCEEEEECCcccccc---CCcc-ccCc----eEEEEeCCeEecCCCCEEEEEEECCHHH--------HHHHHHHHHhcCC
Confidence 999999999975221 1122 2321 29999999998 5556777877665544 3444433333333
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..++... ++...+.+.+.-+.++..+++..+.+.|+++
T Consensus 240 ~~~p~~a-----~l~~rgl~TL~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 240 CTSPDDV-----YLAMRGLRTLGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred CCCHHHH-----HHHHcccCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 3343332 2322344556778899999999999999987
No 246
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=3.9e-14 Score=122.05 Aligned_cols=169 Identities=15% Similarity=0.223 Sum_probs=108.3
Q ss_pred cccccccCccc--ch---HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD--LE---DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~--~~---~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. |. ..+...| +++.++...... +++ .+++|+|++++|+||||.+.+ +++|.++|+
T Consensus 89 d~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~----l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~ 161 (377)
T PRK07671 89 DHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEE----VEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAK 161 (377)
T ss_pred CEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHH----HHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHH
Confidence 55666665433 22 2345577 888887531111 222 268999999999999999865 889999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++++++|+|++|...... .++ .+. ..+++.|+||.+|.++ .-.|+++++++.+ .+.+...+...
T Consensus 162 ~~g~~lvvD~a~~~~~~~---~p~-~~g----~Divv~S~sK~l~G~~~~~~G~~v~~~~~l-------~~~~~~~~~~~ 226 (377)
T PRK07671 162 EKGLLTIVDNTFMTPYWQ---SPI-SLG----ADIVLHSATKYLGGHSDVVAGLVVVNSPEL-------AEDLHFVQNST 226 (377)
T ss_pred HcCCEEEEECCCCccccC---Chh-hhC----CeEEEecCcccccCCccceeEEEEeCcHHH-------HHHHHHHHHhh
Confidence 999999999999743222 122 221 1399999999997443 3457777655432 45555444443
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
....+......+.. +.+.+..+.++.++++..+.+.|++.
T Consensus 227 g~~~~~~~a~l~~~-----~l~tl~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 227 GGILGPQDSWLLLR-----GLKTLGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred cCCCCHHHHHHHHc-----CcChHHHHHHHHHHHHHHHHHHHHcC
Confidence 33233332222222 23445667888889999999999986
No 247
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.63 E-value=1.4e-13 Score=118.67 Aligned_cols=168 Identities=14% Similarity=0.194 Sum_probs=108.4
Q ss_pred cccccccCccc--ch---HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD--LE---DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~--~~---~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. +. ......| +++.++.. .++ ++. .+++++|++++|+||||.+++ +++|.++|
T Consensus 93 d~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~-----d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la 164 (388)
T PRK08861 93 DLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQS-----DAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKA 164 (388)
T ss_pred CEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHH
Confidence 55666554433 22 2233456 66666532 111 222 268999999999999999998 77888999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+++++++|+|++|...... .++ .+. .| +++.|++|.++. .+...|+++++++.+ .+.+......
T Consensus 165 ~~~gi~vIvDea~~~~~~~---~pl-~~G--aD--ivv~S~tK~l~G~~d~~gG~i~~~~~~~-------~~~~~~~~~~ 229 (388)
T PRK08861 165 KAVGALVAVDNTFLTPVLQ---KPL-ELG--AD--FVIHSTTKYINGHSDVIGGVLITKTKEH-------AEELAWWGNC 229 (388)
T ss_pred HHcCCEEEEECCccccccC---CCc-ccC--CC--EEEeecceeccCCCcceeEEEEecHHHH-------HHHHHHHHhc
Confidence 9999999999999853322 122 222 12 899999998864 456789988755432 4445444443
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
.....++.....+. .+.+.+.-+.++..+++..+.+.|+.+
T Consensus 230 ~G~~~~p~~a~l~~-----rgl~Tl~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 230 IGATGTPFDSYMTL-----RGIRTLGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred cCCCCChHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 33334444333222 333455667788899999999999987
No 248
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=5e-14 Score=122.02 Aligned_cols=169 Identities=16% Similarity=0.167 Sum_probs=110.0
Q ss_pred cccccccCccc-ch----HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LE----DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +. ..+...| +++.++..... ++++ .+++|+|++++|+||+|.. .++++|+++|+
T Consensus 105 D~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~----~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~ 177 (394)
T PRK07050 105 DDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGA----GIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAAR 177 (394)
T ss_pred CEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHH----HHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHH
Confidence 66777666555 23 2456678 88877654221 2222 2689999999999999754 67999999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++++++|+|++|...... .++ ... ..+++.|++|.++ ..+.+.|++++.++.+ .+.+...+...
T Consensus 178 ~~gi~livD~a~a~~~~~---~~l-~~G----aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~-------~~~~~~~~~~~ 242 (394)
T PRK07050 178 ARGVVTAIDNTYSAGLAF---KPF-EHG----VDISVQALTKYQSGGSDVLMGATITADAEL-------HAKLKLARMRL 242 (394)
T ss_pred HcCCEEEEECCccccccc---CHH-HcC----CeEEEEECCceecCCCCeeEEEEEECCHHH-------HHHHHHHHHhc
Confidence 999999999999752211 111 121 2388999999996 3445689888765442 45555555443
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..+.++.....+.+.+ +.+..+.++..+++..+.+.|+++
T Consensus 243 G~~~~~~~a~l~lr~l-----~tl~~Rl~~~~~~a~~la~~L~~~ 282 (394)
T PRK07050 243 GIGVSADDCSLVLRGL-----PSLQVRLAAHDRSALEVAEWLKAR 282 (394)
T ss_pred CCCCCHHHHHHHHcCC-----CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 4334444333222222 334557777888888899999876
No 249
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.63 E-value=1.3e-13 Score=120.36 Aligned_cols=211 Identities=14% Similarity=0.103 Sum_probs=128.9
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
.++|+|++.++. +|... ++.+|.++|+++|+++++|++|+...... +.....+. ...++++|++|.++.+.
T Consensus 167 ~~~klVi~~~~~--~g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~-g~~~~~~~---~~Di~~~s~~K~l~g~~ 237 (416)
T PRK13034 167 HKPKLIIAGFSA--YPREL---DFARFREIADEVGALLMVDMAHIAGLVAA-GEHPNPFP---HAHVVTTTTHKTLRGPR 237 (416)
T ss_pred cCCeEEEECCCc--ccccc---CHHHHHHHHHHcCCEEEEeCcccccCccc-CCCCCCCC---CceEEEEeCcccCCCCC
Confidence 357888776554 35554 48888889999999999999998644432 11111111 22389999999994232
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
.|+++++++.+ ...++....... .+...+...++...+.........+.+++++++.++|++.|.+.|+.
T Consensus 238 --GG~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~ 308 (416)
T PRK13034 238 --GGMILTNDEEI-------AKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYD 308 (416)
T ss_pred --CeEEEECcHHH-------HHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 37777766552 223332222211 11222222222222221111223466799999999999999999998
Q ss_pred EecC-CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCC----CCCCCCeEEEEc------cCCHHHHHHHHHHHHH
Q 036024 203 VYGG-INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGF----GPGGEEYIRISG------FGHRESILEASRRLEA 270 (272)
Q Consensus 203 ~~~~-~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~----~~~~~~~~R~s~------~~~~~~i~~~l~~l~~ 270 (272)
+..+ ..+..+.+.+... .....+.+.+++.||.+.+-... .+..+..+|+++ ..+++|++++++.|++
T Consensus 309 ~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~ 388 (416)
T PRK13034 309 LVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD 388 (416)
T ss_pred eccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence 8653 3567777877632 24454545566779999752111 122356799994 2358999999999987
Q ss_pred hC
Q 036024 271 LF 272 (272)
Q Consensus 271 ~l 272 (272)
++
T Consensus 389 ~~ 390 (416)
T PRK13034 389 VL 390 (416)
T ss_pred HH
Confidence 63
No 250
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.63 E-value=3.7e-14 Score=121.62 Aligned_cols=241 Identities=12% Similarity=0.095 Sum_probs=151.1
Q ss_pred ccCccc-chHHhcc---cceeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024 9 VGQAGD-LEDEVGK---YCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84 (272)
Q Consensus 9 ~~~~~~-~~~~~~~---~g~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D 84 (272)
.+.|+. +.+.+.. .+++..++.++.. .++.+..++++++.+++.+|.||...| +++| ++++|+++++|
T Consensus 90 ~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~lV~~~h~et~tG~~~p---i~~I---~~~~g~~~iVD 161 (361)
T TIGR01366 90 FGEFSSKFAKAVKLAPWLGEPIIVTADPGS--APEPQADPGVDVIAWAHNETSTGVAVP---VRRP---EGSDDALVVID 161 (361)
T ss_pred cCHHHHHHHHHHHhhhccCCceEEecCCCC--CCCCccCCCCCEEEEcccCCccceecc---cccc---cccCCCeEEEE
Confidence 344444 4444443 2366666665432 344444579999999999999999988 4444 47899999999
Q ss_pred ccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc---------chHHHHHhhh----
Q 036024 85 SAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF---------PVINDFNRII---- 151 (272)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~---------~~~~~~~~~~---- 151 (272)
.+.+. +..+..+... | +++.|..|.+|.+|- ++.++++++.+..... ... .+....
T Consensus 162 avqs~---g~~~idv~~~----D--~~~~s~~K~lg~~~G-l~~~~~s~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~ 230 (361)
T TIGR01366 162 ATSGA---GGLPVDIAET----D--VYYFAPQKNFASDGG-LWLAIMSPAALERIEAIAASGRWVPEFL-SLPTAVDNSL 230 (361)
T ss_pred cCccc---cCCCCCHHHC----C--EEEEEchhhcCCCCc-eEEEEECHHHHhhhhcccCCCCCCchhh-hHHHHHhccc
Confidence 99875 2223333332 2 788999999997642 5556667766432110 011 111111
Q ss_pred -hhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-CeEecC-C---CceEEEeec-CCCChHH
Q 036024 152 -CTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-IKVYGG-I---NAPYVWAHF-PGRKSWD 223 (272)
Q Consensus 152 -~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~---~~~~~~i~l-~~~~~~~ 223 (272)
..+.++++.....++.++++..... ..+.+.++.++..+++++.+.+.+ ++.... . ......+.+ .+.+..+
T Consensus 231 ~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~ 310 (361)
T TIGR01366 231 KNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAAT 310 (361)
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHH
Confidence 1334556666554555555532222 357788999999999999999986 554431 1 111122233 3556666
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 224 VFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+...| +++||.+.++. ...+.+.+|+|. +++.+|+++++++|+++
T Consensus 311 v~~~L-~~~gI~i~~~~--~~l~~~~vRis~~~~~t~~di~~l~~al~~~ 357 (361)
T TIGR01366 311 VAKIL-RANGIVDTEPY--RKLGRNQLRVAMFPAIDPDDVEALTECVDWV 357 (361)
T ss_pred HHHHH-HHCCCeeccCc--cccCCCcEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 66666 45599997764 223356899995 56999999999999875
No 251
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.63 E-value=2e-14 Score=123.51 Aligned_cols=207 Identities=17% Similarity=0.142 Sum_probs=149.2
Q ss_pred CCceEEEEecCCCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
.++.++++-.-+...|...++. .++++.++|++||+++|+||++.++...|...........+|.+ ++||.+| .
T Consensus 221 ~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDiv----t~aK~ig-~ 295 (447)
T COG0160 221 EEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV----TLAKSLG-G 295 (447)
T ss_pred CceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEE----Eeccccc-C
Confidence 3566666666688888776555 48999999999999999999999988777555555555455643 6899999 6
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--G 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g 200 (272)
|+.+|.++..++. .+ +..-....++..|+++..++.+.++.... +.+.++.++.-+++++.|.++ .
T Consensus 296 G~Pl~avv~r~ei--------~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~---e~L~~~a~~~G~~l~~~L~~l~~~ 363 (447)
T COG0160 296 GLPLSAVVGRAEI--------MD-WPPGGHGGTFGGNPVACAAALAVLDVIEE---ENLLERAAELGEYLRDRLEELQEK 363 (447)
T ss_pred CCceeEEeccHHh--------cc-cCCcccCCCCCcCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999988 44 54445555577999999999999884333 367777777888888888765 2
Q ss_pred CeEecC--CCceEEEeecCC------C---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHH
Q 036024 201 IKVYGG--INAPYVWAHFPG------R---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRR 267 (272)
Q Consensus 201 ~~~~~~--~~~~~~~i~l~~------~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~ 267 (272)
..+.+. .-|.++-+++.. . .......+++++ |+.+..+..+ .+.+||. +..++++++++++.
T Consensus 364 ~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~G~~----~nviRi~PPL~is~e~~d~~l~i 438 (447)
T COG0160 364 HPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTCGPH----GNVLRILPPLTISDEELDEGLDI 438 (447)
T ss_pred cCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEeccCCC----CcEEEEeCCcccCHHHHHHHHHH
Confidence 223332 136677777641 1 123455556555 9888654433 4689999 56699999999999
Q ss_pred HHHhC
Q 036024 268 LEALF 272 (272)
Q Consensus 268 l~~~l 272 (272)
|.++|
T Consensus 439 l~~al 443 (447)
T COG0160 439 LEEAL 443 (447)
T ss_pred HHHHH
Confidence 98764
No 252
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.63 E-value=1.3e-13 Score=119.19 Aligned_cols=170 Identities=14% Similarity=0.124 Sum_probs=104.2
Q ss_pred cccccccCccc-chHHh---cccc-eeEEeecCCCCCcccCCCCCC-CceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEV---GKYC-NIEYLECGPGNNFFPDLKGTS-RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~---~~~g-~~~~~~~~~~~~~~~dl~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. ....+ ...| +++.+..+.+ .+.-.+ .+ ++|+|++.+|+||||.+++ +++|+++|+++
T Consensus 93 D~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~d~~-~l~~~i--~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~ 166 (385)
T PRK08574 93 DRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYPSTE-DIIEAI--KEGRTKLVFIETMTNPTLKVID---VPEVAKAAKEL 166 (385)
T ss_pred CEEEEcCCCchhHHHHHHHhhccCcEEEEECCCHH-HHHHhc--CccCceEEEEECCCCCCCEecC---HHHHHHHHHHc
Confidence 55666655444 33332 4456 6666543321 111111 14 7899999999999999988 78999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc-eeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR-LGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|...... .++ ... ..+++.|++|.++.+|-. .|++++.++.+ .+.+.........
T Consensus 167 gi~livD~t~a~~~~~---~~l-~~G----aDivv~S~sK~l~g~~d~~gG~vi~~~~~~-------~~~~~~~~~~~g~ 231 (385)
T PRK08574 167 GAILVVDNTFATPLLY---RPL-RHG----ADFVVHSLTKYIAGHNDVVGGVAVAWSGEF-------LEELWEWRRRLGT 231 (385)
T ss_pred CCEEEEECCCCccccC---Chh-hhC----CcEEEeeCceeecCCCCceeEEEEECcHHH-------HHHHHHHHHhcCC
Confidence 9999999999642211 122 221 238999999999756654 47666644332 4444444443333
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..++.....+.+- .+.+..+.++..+++..+.+.|+++
T Consensus 232 ~~~p~~a~l~l~~-----l~tL~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 232 IMQPFEAYLVLRG-----LKTLEVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred CCCHHHHHHHHcc-----cCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 3333322222222 2334566777788999999999876
No 253
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.63 E-value=4.3e-14 Score=122.56 Aligned_cols=204 Identities=15% Similarity=0.089 Sum_probs=135.1
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++...++..|... +++.+++|.++|++||+++|+||++.++...|...........+| +.+++|.+| .
T Consensus 178 ~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD----i~t~gK~lg-~ 252 (395)
T PRK03715 178 DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD----IMTLGKGIG-G 252 (395)
T ss_pred CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc----eeeehhhhh-C
Confidence 4566666666677777765 688899999999999999999999997544443222222222344 347899998 7
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|..+|.++++++.. .+.......+++.++++..++.+.++.... +...++.+++.+++++.|+++
T Consensus 253 G~p~~av~~~~~i~---------~~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~ 320 (395)
T PRK03715 253 GVPLAALLAKAEVA---------VFEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEE 320 (395)
T ss_pred CcceEEEEEccccc---------cccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 88999998888772 111111233434677777777777763222 456778888888888888764
Q ss_pred -CCeEecCCCceEEEeecCCCChHHHHHHHHHhc---CeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 200 -GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKT---HITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 200 -g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~---gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
++.-.. ..|.++.+.+..... ..+.+.+.+. ||.+.+.. .+.+|++. ..|++|+++++++|++++
T Consensus 321 ~~i~~vr-G~Glm~~i~l~~~~~-~~~~~~~~~~~~~Gi~~~~~~------~~~lR~~p~l~~t~~ei~~~~~~l~~~l 391 (395)
T PRK03715 321 RGLEGER-GEGLLRALLLGKDIG-PQIVEKARDMQPDGLLLNAPR------PNLLRFMPALNVTTEEIDQMIAMLRSVL 391 (395)
T ss_pred CCcCeEE-cceeEEEEEecCchH-HHHHHHHHhccCCCEEEeecC------CCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 443233 247777788764212 2233333444 99986432 35799995 569999999999998764
No 254
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.62 E-value=7.4e-14 Score=120.33 Aligned_cols=243 Identities=16% Similarity=0.171 Sum_probs=138.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++.++.+. ....+...| +++.++++++ ++.+|++. .+++|+|+ |+||+|...+ +++|.++|++
T Consensus 72 d~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~-~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~ 144 (376)
T TIGR02379 72 DEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANK 144 (376)
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHH
Confidence 66777776655 556667788 9999999876 57777433 26788876 5678899876 8899999999
Q ss_pred cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|+++|+|++|+.+. +.+. .+..+. + +...|| +|.+. +|.+.|+++++++.+ .+.+..++..
T Consensus 145 ~~i~vIeDaa~~~g~~~~~~--~~g~~~---~--~~~fSf~~~K~l~-~g~~gG~v~~~~~~~-------~~~~~~~~~~ 209 (376)
T TIGR02379 145 HQLFVIEDAAQGVMSTYKGR--ALGSIG---H--LGTFSFHETKNYT-SGGEGGALLINDQAF-------IERAEIIREK 209 (376)
T ss_pred CCCEEEEECccccCCccCCc--ccCCCC---C--EEEEeCCCCCcCc-ccCCceEEEECCHHH-------HHHHHHHHHh
Confidence 999999999998654 3332 222221 1 223333 38885 777889988876542 3344333321
Q ss_pred cc-----------------CCcchHH--HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---C-CeEec-CCC-
Q 036024 154 CF-----------------NGASNIA--QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---G-IKVYG-GIN- 208 (272)
Q Consensus 154 ~~-----------------~~~~~~~--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~-~~~- 208 (272)
.. .+.+.-. ..|+....+ ...+++..++-++..+...+.|+++ + +.... +.+
T Consensus 210 g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~q---L~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~ 286 (376)
T TIGR02379 210 GTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQ---LEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGC 286 (376)
T ss_pred CCCCccccccCCCcceeeeecccCCccHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCC
Confidence 10 0111111 111111111 1333444455555555566666553 2 22221 111
Q ss_pred --c-eEEEeecCC-CChHHHHHHHHHhcCeEeeCCC----CCC------C-CC---------CCeEEEEcc--CCHHHHH
Q 036024 209 --A-PYVWAHFPG-RKSWDVFAEILEKTHITTVPGS----GFG------P-GG---------EEYIRISGF--GHRESIL 262 (272)
Q Consensus 209 --~-~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~----~~~------~-~~---------~~~~R~s~~--~~~~~i~ 262 (272)
. .+.++.++. .+..++...| +++||...+.. ... . .+ ...+.+.+. .+++|++
T Consensus 287 ~~~~~~~~i~~~~~~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~ 365 (376)
T TIGR02379 287 QHNAHMFYIKLKDEDDRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQA 365 (376)
T ss_pred eeeeEEEEEEECCcCCHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHH
Confidence 1 234566653 2345555555 55599876322 110 0 00 234555543 3899999
Q ss_pred HHHHHHHHhC
Q 036024 263 EASRRLEALF 272 (272)
Q Consensus 263 ~~l~~l~~~l 272 (272)
+.++.|++++
T Consensus 366 ~i~~~i~~~~ 375 (376)
T TIGR02379 366 RVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHh
Confidence 9999998753
No 255
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=8.1e-14 Score=121.80 Aligned_cols=178 Identities=21% Similarity=0.250 Sum_probs=109.3
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...++..| +++.++......+.-.+ .+++++|++++|+||||.+++ +++|+++|+++
T Consensus 104 D~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai--~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~ 178 (431)
T PRK08248 104 DEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAI--TDKTKALFAETIGNPKGDVLD---IEAVAAIAHEH 178 (431)
T ss_pred CEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc
Confidence 55666654322 334566788 98888874211121112 257899999999999999988 78999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-c-c---------cCC------
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-L-F---------SSG------ 140 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~-~---------~~~------ 140 (272)
++++|+|++|... .. ..++ .+ +..+++.|++|.+|.+|.++|.+++.+.. . . +.-
T Consensus 179 gi~vIvD~t~a~~-~~--~~pl-~~----gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (431)
T PRK08248 179 GIPLIVDNTFASP-YL--LRPI-EH----GADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGL 250 (431)
T ss_pred CCEEEEeCCCCcc-cc--CChh-Hc----CCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccc
Confidence 9999999998631 11 1222 22 22388999999999899999997774321 0 0 000
Q ss_pred ---cch------HHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 141 ---FPV------INDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 141 ---~~~------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..+ ...............++.. +++...+.+.+..+.++.++++..+.+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~-----a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~ 313 (431)
T PRK08248 251 VYTDAVGEAAYITKARVQLLRDLGAALSPFN-----SFLLLQGLETLHLRMERHSENALAVAKFLEEH 313 (431)
T ss_pred hhhhhhchhhHHHHHHHHHHHhcCCCCCHHH-----HHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 000 0000011111112122221 22222344556778888999999999999987
No 256
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.60 E-value=1.5e-13 Score=120.25 Aligned_cols=207 Identities=14% Similarity=0.120 Sum_probs=136.4
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
.++.++++-..+...|... +++.++++.++|++||+++|+||++.++...+...........+|. + +++|.+| .
T Consensus 223 ~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDi--v--t~gK~lg-~ 297 (442)
T TIGR03372 223 DDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDI--L--CLAKALG-G 297 (442)
T ss_pred CcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCe--e--eehhhhc-C
Confidence 3455566555566667755 5777999999999999999999999875444432222233334452 2 4899998 7
Q ss_pred c-cceeEEEecccccccCCcchHHHHH--hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFN--RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
| +.+|.++++++. .+.+. .....++++.++++..|+.+.++.... +...++.+++-+++++.|+++
T Consensus 298 G~~Pigavv~~~~i--------~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l 366 (442)
T TIGR03372 298 GVMPIGATIATEAV--------FSVLFDNPFLHTTTFGGNPLACAAALATINELLE---KNLPAQAAIKGDFLLDGFQQL 366 (442)
T ss_pred CcccceEEEecHHH--------HHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 8 689999988776 33332 223345555788888888888873322 234556666677777777654
Q ss_pred ----C-C-eEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024 200 ----G-I-KVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEA 270 (272)
Q Consensus 200 ----g-~-~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~ 270 (272)
+ . .-.. ..|.++.+.+... ....+...++++ ||.+.+.. + +.+.+|+.. ..|++|+++++++|++
T Consensus 367 ~~~~~~~i~~vR-G~Gl~~giel~~~~~~~~i~~~l~~~-Gvl~~~~~---~-~~~~lr~~Ppl~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 367 AAEYPDLIIEAR-GKGLLMAIEFRDNEIGYAFAKELFQQ-NILVAGTL---N-NAKSIRIEPPLTITIEQCALVIKAAKD 440 (442)
T ss_pred HHhCCCceEEEe-cceEEEEEEeCChHHHHHHHHHHHHC-CcEEeecC---C-CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 2 1 1122 2577888888632 234556666655 99996432 1 136789884 5699999999999998
Q ss_pred hC
Q 036024 271 LF 272 (272)
Q Consensus 271 ~l 272 (272)
+|
T Consensus 441 ~~ 442 (442)
T TIGR03372 441 AL 442 (442)
T ss_pred hC
Confidence 75
No 257
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=1.3e-13 Score=121.19 Aligned_cols=204 Identities=18% Similarity=0.109 Sum_probs=132.7
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.+|++-..+...|... +++.+++|.++|++||+++|+||++.++...+.......+...+| ++ ++||.+| .
T Consensus 220 ~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pD--iv--t~~K~l~-~ 294 (441)
T PRK05769 220 EEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPD--II--TLAKAIA-G 294 (441)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCC--EE--EEccccc-C
Confidence 3455555544466667754 567799999999999999999999997654443322233332344 22 5899998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-- 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-- 200 (272)
|+++|+++++++.. ... ......+++.+++++.++.+.++.. .+ ...++.+++.++|++.|+++.
T Consensus 295 G~p~gav~~~~~i~--------~~~-~~~~~~T~~g~p~~~aaa~a~L~~l-~~---~~~~~~~~~g~~l~~~L~~l~~~ 361 (441)
T PRK05769 295 GLPLGAVIGRAELM--------FLP-PGSHANTFGGNPVAAAAALATLEEL-EE---GLLENAQKLGEYLRKELKELKEK 361 (441)
T ss_pred CcccEEEEEehhhh--------hcC-CCCCCCCCCcCHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999988773 111 1122334456788888888887622 11 566778888888888887642
Q ss_pred CeEe--cCCCceEEEeecCCC-------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024 201 IKVY--GGINAPYVWAHFPGR-------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE 269 (272)
Q Consensus 201 ~~~~--~~~~~~~~~i~l~~~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~ 269 (272)
..+. ....|.++.+.+... ....+...++++ ||.+.+. +...+||+. ..|++|+++++++++
T Consensus 362 ~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-Gil~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~ 434 (441)
T PRK05769 362 YEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKR-GLLLLGA------GKSAIRIIPPLIITEEEADIGLEILE 434 (441)
T ss_pred CCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhC-CcEEecC------CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 2221 112466666666321 122344455554 9998653 246789984 459999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
+++
T Consensus 435 ~~l 437 (441)
T PRK05769 435 EAI 437 (441)
T ss_pred HHH
Confidence 764
No 258
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.60 E-value=2e-13 Score=117.92 Aligned_cols=243 Identities=18% Similarity=0.134 Sum_probs=142.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+++. +...+...| +++.++++++ ++.+|++. .+++|+|+++| ++|...+ +++|.++|++
T Consensus 72 d~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~---~~~i~~la~~ 144 (375)
T PRK11706 72 DEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITPKTRAIVPVH---YAGVACE---MDTIMALAKK 144 (375)
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCCCCeEEEEeC---CCCCccC---HHHHHHHHHH
Confidence 56777776666 667777888 9999999876 56666433 26789988764 6898755 8899999999
Q ss_pred cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|+++|+|++|+.+. +.+ .++..+. + +-+.||+ |.++ +|.+.++++.++++ .+++...+..
T Consensus 145 ~~i~vIeD~a~a~g~~~~~--~~~g~~~---~--~~~~Sf~~~K~l~-~g~gG~~~~~~~~~--------~~~~~~~~~~ 208 (375)
T PRK11706 145 HNLFVVEDAAQGVMSTYKG--RALGTIG---H--IGCFSFHETKNYT-AGEGGALLINDPAL--------IERAEIIREK 208 (375)
T ss_pred cCCEEEEECccccccccCC--eeeecCc---C--EEEEeCCCCcccc-ccCCeEEEECCHHH--------HHHHHHHHHc
Confidence 999999999998755 232 2222221 1 3444554 9997 68777777666665 3333222211
Q ss_pred -----------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC----CeEec-CCC---
Q 036024 154 -----------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG----IKVYG-GIN--- 208 (272)
Q Consensus 154 -----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~--- 208 (272)
...+.+........++.. ...+.+++..++-+++.+.+.+.|+.+. +.+.. +.+
T Consensus 209 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~-~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 287 (375)
T PRK11706 209 GTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLW-AQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKH 287 (375)
T ss_pred CCCcchhhccCCCcceeeecccccCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCce
Confidence 001122222221222221 1123346666667777778888887652 33221 211
Q ss_pred -ceEEEeecCC-CChHHHHHHHHHhcCeEeeCCC----CC------CC--C--------CCCeEEEEcc--CCHHHHHHH
Q 036024 209 -APYVWAHFPG-RKSWDVFAEILEKTHITTVPGS----GF------GP--G--------GEEYIRISGF--GHRESILEA 264 (272)
Q Consensus 209 -~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~----~~------~~--~--------~~~~~R~s~~--~~~~~i~~~ 264 (272)
..+.++.++. ....++...|. ++||.+.... .. +. . ....+-+.+. .+++|++..
T Consensus 288 ~~~~~~~~~~~~~~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i 366 (375)
T PRK11706 288 NAHMFYIKLRDLEDRSALINFLK-EAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTV 366 (375)
T ss_pred eeEEEEEEECCcCCHHHHHHHHH-HCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHH
Confidence 2356677763 34455555554 5599875321 00 00 0 0233444443 378999999
Q ss_pred HHHHHHh
Q 036024 265 SRRLEAL 271 (272)
Q Consensus 265 l~~l~~~ 271 (272)
++.|+++
T Consensus 367 ~~~i~~~ 373 (375)
T PRK11706 367 IDTILEF 373 (375)
T ss_pred HHHHHHH
Confidence 9998875
No 259
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.60 E-value=1.8e-13 Score=117.79 Aligned_cols=168 Identities=18% Similarity=0.233 Sum_probs=108.2
Q ss_pred cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++.++.+. ... .+...| ++..++...+ .++++ .+++|+|++++|+||+|.. .++++|+++|+
T Consensus 90 D~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~----e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~ 162 (377)
T TIGR01324 90 DHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIG----EDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAAR 162 (377)
T ss_pred CEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCH----HHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHH
Confidence 55665554443 222 235567 7666654322 12332 2689999999999999877 56999999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++|+++|+|++|...... .++ .+ +.-++++|++|.+| .++...|+++++++. .+.+.......
T Consensus 163 ~~g~~livD~t~a~g~~~---~pl-~~----gaDivv~S~tK~l~G~~d~~gG~v~~~~~~--------~~~l~~~~~~~ 226 (377)
T TIGR01324 163 NPGIVIMIDNTWAAGLLF---KPL-EH----GVDISIQAGTKYLVGHSDIMIGTVVANART--------WDQLREHSYLM 226 (377)
T ss_pred HcCCEEEEECCCcccccc---Ccc-cc----CceEEEecCceeccCCCCceEEEEEeCHHH--------HHHHHHHHHHh
Confidence 999999999999853221 111 22 22389999999996 345678988887765 34443333333
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
....++.... .++ .+.+.+..+.++.++++..+.+.|+++
T Consensus 227 G~~l~p~~a~---~~~--rgl~tl~~R~~~~~~~a~~la~~L~~~ 266 (377)
T TIGR01324 227 GQMVDADDAY---TTL--RGLRTLGVRLKQHQESSLAIAKWLSEQ 266 (377)
T ss_pred CCCCCHHHHH---HHH--hhhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 3223332222 222 333556677888899999999999986
No 260
>PRK05939 hypothetical protein; Provisional
Probab=99.59 E-value=9.7e-14 Score=120.23 Aligned_cols=178 Identities=17% Similarity=0.134 Sum_probs=108.5
Q ss_pred cccccccCccc----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..+.+. +...+...| +++.++......+..-+ .+++|+|++++|+||||.+ .++++|+++|+++|
T Consensus 87 d~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l~~~l--~~~tklV~vesp~NptG~v---~dl~~I~~la~~~g 161 (397)
T PRK05939 87 DHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNVAAAI--RPNTRMVFVETIANPGTQV---ADLAGIGALCRERG 161 (397)
T ss_pred CEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHHHHhC--CCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcC
Confidence 55666655332 223456778 88888764221222112 2689999999999999988 46999999999999
Q ss_pred CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccc--------cCC------cchH
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF--------SSG------FPVI 144 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~--------~~~------~~~~ 144 (272)
+++|+|++|.... ......+ +..+++.|+||.++..|.++|++++.+.... ... ....
T Consensus 162 i~livD~t~a~~~----~~~~~~~----gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
T PRK05939 162 LLYVVDNTMTSPW----LFRPKDV----GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGL 233 (397)
T ss_pred CEEEEECCccccc----ccCcccc----CCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHH
Confidence 9999999986311 0111111 2349999999999878999999887543210 000 0000
Q ss_pred HHHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 145 NDFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 145 ~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..+... ........++ .. +++...+.+.+..+.++..+++..+.+.|+.+
T Consensus 234 ~~~~~~~~~~~G~~~~p--~~---a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~ 284 (397)
T PRK05939 234 TQIRKKGLRDMGATLSS--EA---AHRIAIGAETLALRVDRSCSNALALAQFLEAH 284 (397)
T ss_pred HHHHHHHHHhcCCCCCH--HH---HHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 011111 1111111222 22 22222344555667777788999999999987
No 261
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.59 E-value=3.5e-13 Score=118.96 Aligned_cols=232 Identities=15% Similarity=0.081 Sum_probs=139.5
Q ss_pred EeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCcc
Q 036024 27 YLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIY 100 (272)
Q Consensus 27 ~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 100 (272)
++..+.+ +..+|+++ ..++++|++. .++ +|+..+ +++|.++|+++|+++++|++|.....+....+ .
T Consensus 160 ~y~~~~~-~g~iD~d~Le~~l~~~~pklIv~~-~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~-~ 232 (475)
T PLN03226 160 PYRLDES-TGLIDYDKLEKKAMLFRPKLIIAG-ASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAA-S 232 (475)
T ss_pred eeeecCC-CCCcCHHHHHHHHhhcCCeEEEEe-cCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCC-C
Confidence 4445544 44456333 1467766553 332 566665 77899999999999999999985444332211 0
Q ss_pred ccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCc------chHHHHHhhhh-hccCCcchHHHHHHHHhccc
Q 036024 101 EIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGF------PVINDFNRIIC-TCFNGASNIAQAGGLACLSS 172 (272)
Q Consensus 101 ~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~ 172 (272)
... . .-++++|++|++ |..| |++.++++....... .+...+..... ....+++.....++...+..
T Consensus 233 p~~-~--~Div~~t~hK~L~GP~G---g~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~ 306 (475)
T PLN03226 233 PFE-Y--CDVVTTTTHKSLRGPRG---GMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQ 306 (475)
T ss_pred CCC-C--CeEEEecCcccccCCCc---eEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHH
Confidence 011 1 128899999999 5445 888887654211000 01111111111 12223344444444444543
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEEeecC--CCChHHHHHHHHHhcCeEeeCCCCCC---CCC
Q 036024 173 EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVWAHFP--GRKSWDVFAEILEKTHITTVPGSGFG---PGG 246 (272)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~ 246 (272)
......++.++++.++.++|.+.|.+.|+++..+. ....+++.+. +.+. ......|++.||.+..+.-++ +-.
T Consensus 307 i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~-~~~~~~L~~~~I~~nk~~~p~~~~~~~ 385 (475)
T PLN03226 307 AMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTG-SRVEKVLDLAHITLNKNAVPGDSSALV 385 (475)
T ss_pred HhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCH-HHHHHHHHHCCCEECCCCCCCCcccCC
Confidence 22233467789999999999999999999987642 3567778874 3344 445566777899998765322 223
Q ss_pred CCeEEEEc------cCCHHHHHHHHHHHHHhC
Q 036024 247 EEYIRISG------FGHRESILEASRRLEALF 272 (272)
Q Consensus 247 ~~~~R~s~------~~~~~~i~~~l~~l~~~l 272 (272)
++.+|++. ..+++|++++.+.|.++|
T Consensus 386 ~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~ 417 (475)
T PLN03226 386 PGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAV 417 (475)
T ss_pred CCCcccCcHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 56789862 236888998888887653
No 262
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.59 E-value=2.8e-13 Score=117.72 Aligned_cols=240 Identities=15% Similarity=0.128 Sum_probs=147.2
Q ss_pred chHHhcccc-eeEEeec-CCCCCcccCCCCC-----C---CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024 15 LEDEVGKYC-NIEYLEC-GPGNNFFPDLKGT-----S---RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~-~~~~~~~~dl~~~-----~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D 84 (272)
....+...| +++.++. ..++.+.+|++.+ + ++.++++++|+ |+.....+++++|.++|++||+++++|
T Consensus 164 ~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvD 241 (444)
T TIGR03531 164 CIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVN 241 (444)
T ss_pred HHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEE
Confidence 445667778 8898885 2334687775442 2 55666666665 444445578999999999999999999
Q ss_pred ccCCccccCCCCCCc--cccCCCCCceEEEecCccccCCCccceeEEE-ecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024 85 SAYAAYVTDGCPRSI--YEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLFSSGFPVINDFNRIICTCFNGASNI 161 (272)
Q Consensus 85 ~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (272)
++|+..... ...+ .... ...-.+++.|++|.+..||. |+++ .+++.+ .+.+...... ...+.+
T Consensus 242 aAyg~~~~~--~~~~~~~g~~-~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el-------~~~i~~~y~g--~~~~s~ 307 (444)
T TIGR03531 242 NAYGLQSNK--YMELINKAIK-VGRVDAVVSSTDKNFMVPVG--GAIIYSFDENF-------IQEISKSYPG--RASASP 307 (444)
T ss_pred CcCcCcChh--hhhhhhcccc-ccCCCeEEEeCccCCCCCCC--EEEEEECCHHH-------HHHHHHhccC--CCCChH
Confidence 999852211 0111 1111 00113678899999987765 5544 534332 3344332211 224456
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCC-ceEEEeecC---CCChHHHHHHHHHhcC
Q 036024 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGIN-APYVWAHFP---GRKSWDVFAEILEKTH 233 (272)
Q Consensus 162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~-~~~~~i~l~---~~~~~~~~~~ll~~~g 233 (272)
.+.+...++. .+.+.++++.++..++++++.+.|+++ |.++..... ..-+.+.+. +.+..++...|..+ +
T Consensus 308 ~~~~~~~ll~-~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~-~ 385 (444)
T TIGR03531 308 SLDVLITLLS-LGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSR-R 385 (444)
T ss_pred HHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhC-C
Confidence 6776666665 566788999999999999999999875 667664322 233444444 44566666666555 5
Q ss_pred eE----eeCCC-------C---CCCCC----CCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 234 IT----TVPGS-------G---FGPGG----EEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 234 i~----v~~g~-------~---~~~~~----~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
|. |.||. . |+... ..++-++ +..+++|++.++++|++.+
T Consensus 386 v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 386 VTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred CCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 52 33554 2 22211 1233333 3558999999999999864
No 263
>PRK07678 aminotransferase; Validated
Probab=99.58 E-value=1.9e-13 Score=120.39 Aligned_cols=212 Identities=14% Similarity=0.097 Sum_probs=135.3
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++-..+.-.|.+ .+++.++++.++|++||+++|.||++.+|...+...........+|.+ +++|.+| .
T Consensus 212 ~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv----t~gK~lg-g 286 (451)
T PRK07678 212 ETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII----TMAKGIT-S 286 (451)
T ss_pred CceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE----Eeecccc-c
Confidence 455666665445555666 466779999999999999999999998775544332233333345532 6799998 6
Q ss_pred c-cceeEEEecccccccCCcchHHHHHh------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNR------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (272)
| +.+|.++++++. .+.+.. +...++++.++++..++.+.++.... +...++.+++.++|++.
T Consensus 287 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~ 355 (451)
T PRK07678 287 AYLPLSATAVKKEI--------YEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN---ENLIERSAQLGELLLEQ 355 (451)
T ss_pred CCcceeEEEEcHHH--------HHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence 7 689999999887 343331 23455666888888888888873322 23455666666666666
Q ss_pred HHh----CCCeEecCCCceEEEeecCCC-------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHH
Q 036024 196 LAS----LGIKVYGGINAPYVWAHFPGR-------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRE 259 (272)
Q Consensus 196 L~~----~g~~~~~~~~~~~~~i~l~~~-------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~ 259 (272)
|++ .++...-...|.++.+.+... + ...+...++++ ||.+.+....-+.+...+|++. ..|++
T Consensus 356 l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~-Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~ 434 (451)
T PRK07678 356 LKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEK-GLIIGKNGDTVAGYNNVLTLSPPLVISSE 434 (451)
T ss_pred HHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHC-CcEEeecCccccCCCCEEEEECCCcCCHH
Confidence 644 232211112455666666310 1 12345555555 9999753211123346799984 55999
Q ss_pred HHHHHHHHHHHhC
Q 036024 260 SILEASRRLEALF 272 (272)
Q Consensus 260 ~i~~~l~~l~~~l 272 (272)
|+++++++++++|
T Consensus 435 eid~~~~~l~~~l 447 (451)
T PRK07678 435 EIAFIVGTLKTAL 447 (451)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 264
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.58 E-value=2.1e-13 Score=120.11 Aligned_cols=206 Identities=14% Similarity=0.146 Sum_probs=137.2
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-..+...|... |++.++++.++|++||+++|+||++.++...|...........+| ++ +++|.+| .|
T Consensus 231 ~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD--iv--t~gK~lg-gG 305 (459)
T PRK11522 231 DVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPD--IL--CLAKALG-GG 305 (459)
T ss_pred cEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCC--EE--Eechhhh-CC
Confidence 445555555566677754 566799999999999999999999986543343222222333344 22 7899998 77
Q ss_pred -cceeEEEecccccccCCcchHHHHH--hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024 124 -VRLGWTVVPEELLFSSGFPVINDFN--RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL- 199 (272)
Q Consensus 124 -~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 199 (272)
+.+|.+++.++. .+.+. .....++++.++++..++.+.++.... +...++.+++.++|++.|+++
T Consensus 306 ~~Pigav~~~~~i--------~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~ 374 (459)
T PRK11522 306 VMPIGATIATEEV--------FSVLFDNPFLHTTTFGGNPLACAAALATINVLLE---QNLPAQAEQKGDYLLDGFRQLA 374 (459)
T ss_pred CccceeEEEcHHH--------HHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHH
Confidence 689999998877 33332 223445555688888888888873332 345677888888888888765
Q ss_pred -CCe-E---ecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 200 -GIK-V---YGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 200 -g~~-~---~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
... + .. ..|.++.+.+.... ...+...+++ +||.+.+.. .+...+|+.. ..+++|+++++++|+++
T Consensus 375 ~~~~~~i~~Vr-G~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~----~~~~~lr~~Ppl~~t~~~id~~l~~l~~~ 448 (459)
T PRK11522 375 REYPDLVQEAR-GKGMLMAIEFVDNEIGYNFASEMFR-QRVLVAGTL----NNAKTIRIEPPLTLTIEQCEQVLKAARKA 448 (459)
T ss_pred HhCCCceeeEE-eceeEEEEEecCchHHHHHHHHHHH-CCeEEEecC----CCCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 221 1 22 24777778876422 3345555555 499997532 1246899884 56999999999999876
Q ss_pred C
Q 036024 272 F 272 (272)
Q Consensus 272 l 272 (272)
+
T Consensus 449 l 449 (459)
T PRK11522 449 L 449 (459)
T ss_pred H
Confidence 4
No 265
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.58 E-value=3.6e-13 Score=115.42 Aligned_cols=151 Identities=18% Similarity=0.192 Sum_probs=99.0
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
+++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... ..++ .... | +++.|++|.++..|
T Consensus 135 ~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~---~~pl-~~ga--D--ivv~S~tK~l~g~~ 203 (364)
T PRK07269 135 EDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY---QRPI-ELGA--D--IVLHSATKYLSGHN 203 (364)
T ss_pred cCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc---CCch-hhCC--c--EEEecCceeccCCC
Confidence 68999999999999998875 99999999999999999999754221 1222 2221 2 89999999997333
Q ss_pred -cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 036024 124 -VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI 201 (272)
Q Consensus 124 -~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 201 (272)
.-.|+++++++.+ .+.+...+.......++.....+...+ +.+..+.++.++++..+.+.|+.+ .+
T Consensus 204 d~~gG~v~~~~~~l-------~~~~~~~~~~~G~~~s~~~a~l~~~~L-----~tL~~r~~~~~~na~~~a~~L~~~p~v 271 (364)
T PRK07269 204 DVLAGVVVTNDLEL-------YEKLFYNLNTTGAVLSPFDSYLLMRGL-----KTLSLRMERSTANAQEVVAFLKKSPAV 271 (364)
T ss_pred cccceEEEeCcHHH-------HHHHHHHHHHhCCCCCHHHHHHHHcCC-----CcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 2358878765442 344443332222334444333333333 345778888899999999999987 33
Q ss_pred -eEecCCCceEEEeecC
Q 036024 202 -KVYGGINAPYVWAHFP 217 (272)
Q Consensus 202 -~~~~~~~~~~~~i~l~ 217 (272)
.+..|..|..+.+.+.
T Consensus 272 ~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 272 KEVLYTGKGGMISFKVA 288 (364)
T ss_pred cEEeCCCcCcEEEEEEC
Confidence 4543334445555554
No 266
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.58 E-value=2.1e-13 Score=119.24 Aligned_cols=205 Identities=12% Similarity=0.054 Sum_probs=135.8
Q ss_pred CCceEEEEecC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSP-NNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.++++-.. +...|.. .+++.+++|.++|++||+++|+||++.++...|...........+| ++ +++|.++
T Consensus 205 ~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD--iv--~~gK~l~- 279 (429)
T PRK06173 205 DEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD--IM--CIGKALT- 279 (429)
T ss_pred CcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCC--EE--Eeehhhh-
Confidence 45666666542 6777776 6788899999999999999999999977543333222223333344 33 3899997
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHHh-----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFNR-----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (272)
.| ..++.++.+++. .+.+.. +...++++.++++..++.+.++.... +...++.+++.++|++.
T Consensus 280 gG~~p~~a~~~~~~i--------~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~ 348 (429)
T PRK06173 280 GGYLTLSATITTEAI--------AQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE---SPWQQNIQRIEAQLKQE 348 (429)
T ss_pred CCccccceEEecHHH--------HHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence 77 468888888776 333321 22333444677888877777763222 23467788888888888
Q ss_pred HHhC-CCeEecC--CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024 196 LASL-GIKVYGG--INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE 269 (272)
Q Consensus 196 L~~~-g~~~~~~--~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~ 269 (272)
|+++ +...... ..|.++.+.+... ....+...++++ ||.+.+.. +.+||. +..+++|+++++++|+
T Consensus 349 L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~-Gi~v~~~g-------~~l~~~Ppl~it~~ei~~~~~~l~ 420 (429)
T PRK06173 349 LAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVEH-GIWVRPFG-------KLVYIMPPFIISPDELSQLTSGLL 420 (429)
T ss_pred HHHhhcCCCeeeeeccceEEEEEeCCcccHHHHHHHHHHC-CeEEEecC-------CEEEEeCCccCCHHHHHHHHHHHH
Confidence 8764 3332221 2477777888643 334555555554 99997531 478998 5679999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
++|
T Consensus 421 ~~l 423 (429)
T PRK06173 421 RVL 423 (429)
T ss_pred HHH
Confidence 864
No 267
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.58 E-value=1.8e-14 Score=120.38 Aligned_cols=178 Identities=14% Similarity=0.023 Sum_probs=105.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCc----ccCCCC-------CCCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNF----FPDLKG-------TSRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~----~~dl~~-------~~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..+... ....+...| ++++++.+.+.++ .+|++. .++++++++++| ||||.+++ +++|
T Consensus 100 d~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I 175 (294)
T cd00615 100 DKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKI 175 (294)
T ss_pred CEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHH
Confidence 45555544333 444556677 8888887655432 344222 257899999998 69999987 8899
Q ss_pred HHHHHHcCCEEEEcccCCcc-ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEE-EecccccccCCcchHHHHH
Q 036024 71 VEFARNNGSIIIFDSAYAAY-VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT-VVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~-~~~~~~~~~~~~~~~~~~~ 148 (272)
+++|+++|+++++|++|+.. .+.+. .+.... ..+..+++.|++|++ +|++.|++ ..+.+... ...+.
T Consensus 176 ~~~~~~~g~~livDeA~~~~~~~~~~-~~~~~~--~~~~div~~S~hK~l--~g~~~~~~l~~~~~~~~------~~~~~ 244 (294)
T cd00615 176 VEEAHHRGLPVLVDEAHGAHFRFHPI-LPSSAA--MAGADIVVQSTHKTL--PALTQGSMIHVKGDLVN------PDRVN 244 (294)
T ss_pred HHHHHhcCCeEEEECcchhhhccCcc-cCcchh--hcCCcEEEEchhccc--chHhHHHHHHhCCCcCC------HHHHH
Confidence 99999999999999999742 23221 111111 123459999999986 56665554 44444211 22333
Q ss_pred hhhhhc-cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024 149 RIICTC-FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 149 ~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
...... +.+++.....++..++. ....+.++..++..++.+.+++.+.
T Consensus 245 ~~~~~~~ttsps~~~~asl~~a~~-~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 245 EALNLHQSTSPSYLILASLDVARA-MMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHCCCCcHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 222222 22233333333333332 2223335567778888888888775
No 268
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.58 E-value=2.5e-13 Score=117.17 Aligned_cols=171 Identities=15% Similarity=0.181 Sum_probs=104.9
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+...| +++.++......+.-.+ .+++++|++.+|+||||.+.+ +++|+++|+++
T Consensus 89 d~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai--~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~ 163 (380)
T PRK06176 89 DHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAI--KPNTKALYLETPSNPLLKITD---LAQCASVAKDH 163 (380)
T ss_pred CEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhc--CcCceEEEEECCCCCCceecC---HHHHHHHHHHc
Confidence 55666655332 234456677 77777653111111111 268999999999999999977 88999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
++++|+|++|...... .++ .+.. | +++.|++|.++.++ .-.|+++++++.+ .+.+...+.....
T Consensus 164 gi~vivD~t~a~~~~~---~p~-~~ga--D--ivv~S~tK~l~g~~d~~gG~vv~~~~~~-------~~~~~~~~~~~G~ 228 (380)
T PRK06176 164 GLLTIVDNTFATPYYQ---NPL-LLGA--D--IVVHSGTKYLGGHSDVVAGLVTTNNEAL-------AQEIAFFQNAIGG 228 (380)
T ss_pred CCEEEEECCccccccC---Ccc-ccCC--C--EEEecCceeccCCccceeeEEEecHHHH-------HHHHHHHHHHhcC
Confidence 9999999999853322 122 2221 2 89999999997554 3457777655432 3444433333222
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..++.... +...+.+.+..+.++.+++...+.+.|+..
T Consensus 229 ~~~~~~~~-----l~~~gl~tl~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 229 VLGPQDSW-----LLQRGIKTLGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred CCCHHHHH-----HHHhccCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 22322222 111222344556677778888888888876
No 269
>PLN02509 cystathionine beta-lyase
Probab=99.57 E-value=3e-13 Score=118.63 Aligned_cols=169 Identities=18% Similarity=0.265 Sum_probs=105.9
Q ss_pred cccccccCccc-ch----HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LE----DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +. ..+...| +++.++... . .++++ .+++|+|++++|+||||.+ .++++|+++|+
T Consensus 172 D~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d---~-e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk 244 (464)
T PLN02509 172 EEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTN---L-DEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAH 244 (464)
T ss_pred CEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCC---H-HHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHH
Confidence 55666555444 33 2234567 777775431 1 11222 3688999999999999987 66999999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++|+++|+|++|...... .++ .... .+++.|++|.++.+| .-.|+++++++.+ ...+.......
T Consensus 245 ~~g~~lIVD~A~a~~~~~---~pl-~~ga----Divv~S~tK~l~G~gdv~gG~v~~~~~~l-------~~~~~~~~~~~ 309 (464)
T PLN02509 245 AQGALVLVDNSIMSPVLS---RPL-ELGA----DIVMHSATKFIAGHSDVMAGVLAVKGEKL-------AKEVYFLQNSE 309 (464)
T ss_pred HcCCEEEEECCccccccC---Chh-hcCC----cEEEecCcccccCCCccceeEEEeccHHH-------HHHHHHHHHhc
Confidence 999999999998643221 122 1211 289999999887433 3357777655542 23322222222
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
....++.. +++...+.+.+..+.++.+++++.+.+.|+++
T Consensus 310 g~~l~p~~-----A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 310 GSGLAPFD-----CWLCLRGIKTMALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred CCCcCHHH-----HHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 22223222 22222334566778899999999999999986
No 270
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.56 E-value=1.1e-12 Score=112.93 Aligned_cols=205 Identities=15% Similarity=0.137 Sum_probs=125.9
Q ss_pred cccccccCccc-ch----HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LE----DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +. ..++..| ++..++.+....+.-.+ .+++|+|++++|+||++.+ .++++|+++|+++
T Consensus 104 D~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al--~~~TklV~lesPsNP~l~v---~dl~~I~~la~~~ 178 (395)
T PRK05967 104 DHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLM--RPNTKVVHTEAPGSNTFEM---QDIPAIAEAAHRH 178 (395)
T ss_pred CEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhc--CcCceEEEEECCCCCCCcH---HHHHHHHHHHHHh
Confidence 55666655444 33 3457788 88887654221121112 2679999999999998655 7799999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|....+ ..+..+.. | +++.|.+|.++ .++...|+++.+++. .+.+.........
T Consensus 179 g~~vvVD~t~a~p~~----~~pl~~Ga--D--ivv~S~tKy~~Gh~d~~~G~v~~~~~~--------~~~l~~~~~~~G~ 242 (395)
T PRK05967 179 GAIVMMDNTWATPLY----FRPLDFGV--D--ISIHAATKYPSGHSDILLGTVSANEKC--------WPQLLEAHGTLGL 242 (395)
T ss_pred CCEEEEECCccCcee----cChhHcCC--C--EEEEecccccCCCCCeeEEEEEcCHHH--------HHHHHHHHHHcCC
Confidence 999999999975221 12223322 2 99999999874 456777877766543 3333322222222
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEecC----------------CCceEEEeecCC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYGG----------------INAPYVWAHFPG 218 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----------------~~~~~~~i~l~~ 218 (272)
..++.. +++...+.+.+.-+.++..+++..+.+.|+++ .+ ++..| ..|..+.+.+++
T Consensus 243 ~~~p~d-----a~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK05967 243 CAGPDD-----TYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAA 317 (395)
T ss_pred CCCHHH-----HHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 233332 22332444566778888899999999999986 33 22222 124567788863
Q ss_pred C--ChHHHHHHHHHhcCe
Q 036024 219 R--KSWDVFAEILEKTHI 234 (272)
Q Consensus 219 ~--~~~~~~~~ll~~~gi 234 (272)
. ++.+...++++.-.+
T Consensus 318 ~~~~~~~~~~~f~~~l~l 335 (395)
T PRK05967 318 GPEKGKAKAHAFLDALEI 335 (395)
T ss_pred CCcccHHHHHHHHHhCCc
Confidence 2 134445555555443
No 271
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.55 E-value=2e-13 Score=108.79 Aligned_cols=228 Identities=16% Similarity=0.134 Sum_probs=148.0
Q ss_pred cccceeEEeecCCCCCcccCCCC-------------CCCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcc
Q 036024 20 GKYCNIEYLECGPGNNFFPDLKG-------------TSRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDS 85 (272)
Q Consensus 20 ~~~g~~~~~~~~~~~~~~~dl~~-------------~~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~ 85 (272)
+.++.+.+.++.++++...|++. .|.+++|.+-|-+|-+| .++|.+.+.++.++|+++++.+..|.
T Consensus 116 s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DG 195 (384)
T KOG1368|consen 116 SQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDG 195 (384)
T ss_pred hhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecch
Confidence 34455566666666565555333 26789999987755555 99999999999999999999999999
Q ss_pred cCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHH
Q 036024 86 AYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAG 165 (272)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 165 (272)
+.-+-..-....++..+....|. +.+ .+||.+|+| +|-+++.+..+ ++....++.....+.-..+..|
T Consensus 196 ARi~NAavasgV~vk~i~~~fDS-Vsi-CLSKglgAP---VGSViVG~k~F-------I~kA~~~RKalGGGmRQsGvLa 263 (384)
T KOG1368|consen 196 ARIFNAAVASGVPVKKICSAFDS-VSI-CLSKGLGAP---VGSVIVGSKDF-------IDKARHFRKALGGGMRQSGVLA 263 (384)
T ss_pred hhhhhHHHHcCCCHHHHHHhhhh-hhh-hhhccCCCC---cccEEEccHHH-------HHHHHHHHHHhcCchhHHHHHH
Confidence 98764433345566655433332 222 589999866 57655544443 4444444443333344444444
Q ss_pred HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecC-CCceEEEeecC--CCChHHHHHHHHHhcCeEeeCCCC
Q 036024 166 GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGG-INAPYVWAHFP--GRKSWDVFAEILEKTHITTVPGSG 241 (272)
Q Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v~~g~~ 241 (272)
++++...... -...++-.+++..+.+.++..+ +.+.-+ -.++++.+.+. ..+.++++..+ +++||.+.++.
T Consensus 264 aaaLval~~~---~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~-~k~gi~lm~~~- 338 (384)
T KOG1368|consen 264 AAALVALDEN---VPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFL-EKNGILLMGGA- 338 (384)
T ss_pred HHHHHHhhcc---hHHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHH-HHCCeEEeecc-
Confidence 4444431111 2244556667777777777764 777655 46778777774 45667777766 55599998876
Q ss_pred CCCCCCCeEEEEcc--CCHHHHHHHHHHHH
Q 036024 242 FGPGGEEYIRISGF--GHRESILEASRRLE 269 (272)
Q Consensus 242 ~~~~~~~~~R~s~~--~~~~~i~~~l~~l~ 269 (272)
+..+|+.+. .++++++..+..+.
T Consensus 339 -----s~r~Rivlh~Qvt~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 339 -----SRRIRIVLHHQVTDEDVEYVKSVLS 363 (384)
T ss_pred -----ccceEEEEEEecCHHHHHHHHHHHH
Confidence 446898874 48999998888884
No 272
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.54 E-value=5.8e-13 Score=116.35 Aligned_cols=203 Identities=13% Similarity=0.035 Sum_probs=132.2
Q ss_pred CceEEEEec-CCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCS-PNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++.+|++-. .+.-.|.. .+++.+++|.++|++|++++|+||++.++...|...........+| ++ +++|.+| .
T Consensus 204 ~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PD--i~--t~gK~l~-g 278 (428)
T PRK07986 204 EIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPD--IL--CLGKALT-G 278 (428)
T ss_pred cEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCC--EE--Eechhhh-C
Confidence 444555544 25555654 4668899999999999999999999977643343222222333344 22 5899997 7
Q ss_pred c-cceeEEEecccccccCCcchHHHHHh-----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNR-----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 196 (272)
| +.+|.++++++. .+.+.. +....+++.++++..++.+.++.... +...++.+++.+++++.|
T Consensus 279 G~~p~~av~~~~~i--------~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~---~~~~~~~~~~g~~l~~~l 347 (428)
T PRK07986 279 GTMTLSATLTTREV--------AETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES---GDWQQQVAAIEAQLREEL 347 (428)
T ss_pred CcccCcchhchHHH--------HHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHH
Confidence 7 588888888877 444432 12334455778888888777763222 235677777777888877
Q ss_pred HhC-CCeE---ecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024 197 ASL-GIKV---YGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE 269 (272)
Q Consensus 197 ~~~-g~~~---~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~ 269 (272)
+++ .... .. ..|.+..+.+... ....+...+++ +|+.+.+.. +.+|+. +..+++|+++++++|.
T Consensus 348 ~~l~~~~~i~~vR-g~Gl~~~ve~~~~~~~~~~~~~l~~-~Gl~~~~~g-------~~i~~~Ppl~it~~ei~~~~~~l~ 418 (428)
T PRK07986 348 APLRDAPMVADVR-VLGAIGVVETTRPVNMAALQRFFVE-QGVWIRPFG-------KLIYLMPPYIILPEQLQRLTAAVN 418 (428)
T ss_pred HHHhcCCCEEeEe-ccceEEEEEeCCcccHHHHHHHHHH-CCcEEEecC-------CEEEEeCCCCCCHHHHHHHHHHHH
Confidence 764 2111 11 1366777777532 23445555554 599997631 478997 6679999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
++|
T Consensus 419 ~~l 421 (428)
T PRK07986 419 RAV 421 (428)
T ss_pred HHH
Confidence 764
No 273
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.54 E-value=7.7e-13 Score=117.67 Aligned_cols=204 Identities=11% Similarity=0.027 Sum_probs=132.7
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.+|++-..+...|.+. +++.+++|.++|++||+++|+||++.++..-+...........+| +.+++|.+| .|
T Consensus 260 ~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PD----ivtlgK~lg-gG 334 (504)
T PLN02760 260 TIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPD----LVSLAKALS-SA 334 (504)
T ss_pred ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCc----EEEeccccc-CC
Confidence 444555544466667654 677799999999999999999999977644443322222333344 357899998 66
Q ss_pred -cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024 124 -VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195 (272)
Q Consensus 124 -~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (272)
+.+|.++++++. .+.+.. .....+++.++++..++.+.++.... +...++.+++.++|++.
T Consensus 335 ~~PigAv~~~~~i--------~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~ 403 (504)
T PLN02760 335 YMPIGAVLVSPEI--------SDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE---RNIPEHVNKIAPRFQDG 403 (504)
T ss_pred ccccceEeecHHH--------HhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence 489999998877 333322 22345556788888888888873322 34567777777777777
Q ss_pred HHhC---CCeEecCCCceEEEeecCC-CC-----------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCH
Q 036024 196 LASL---GIKVYGGINAPYVWAHFPG-RK-----------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHR 258 (272)
Q Consensus 196 L~~~---g~~~~~~~~~~~~~i~l~~-~~-----------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~ 258 (272)
|+++ ++...--..|.++-+.+.. .. ...+...++++ ||.+.+.. ..+|++ +..++
T Consensus 404 L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g-------~~lrl~Ppl~it~ 475 (504)
T PLN02760 404 IKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKR-GMLVRVAG-------DNIMMSPPLIITP 475 (504)
T ss_pred HHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhC-CcEEEecC-------CEEEEECCCCCCH
Confidence 7664 2211111235666666632 11 22344555555 99986521 468999 45799
Q ss_pred HHHHHHHHHHHHhC
Q 036024 259 ESILEASRRLEALF 272 (272)
Q Consensus 259 ~~i~~~l~~l~~~l 272 (272)
+|+++++++|+++|
T Consensus 476 eeid~~~~~l~~al 489 (504)
T PLN02760 476 EEVDELISIYGKAL 489 (504)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 274
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=1.3e-13 Score=115.52 Aligned_cols=208 Identities=20% Similarity=0.210 Sum_probs=146.1
Q ss_pred EEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC--CCceEEEecCccccCCCcc
Q 036024 48 IIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA--REVAIEISSFSKFSGFTGV 124 (272)
Q Consensus 48 ~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~ 124 (272)
++++. .--..-|.+. ++.++++++++++++++.||+|+....+..+.....+.+. .+..|.+++|.|++|..|
T Consensus 278 i~iivegiysmEg~iv---~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G- 353 (519)
T KOG1357|consen 278 ILICVEGIYSMEGTIV---DLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG- 353 (519)
T ss_pred eeeeeccceeccCeec---ccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc-
Confidence 44444 4444666664 4899999999999999999999987776666666666433 355699999999999888
Q ss_pred ceeEEEecccccccCCcchHHHHHhhh---hhccCCcchHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024 125 RLGWTVVPEELLFSSGFPVINDFNRII---CTCFNGASNIAQAGGLACLS---SEGLEAVHSVVDYYKENTKILIDTLAS 198 (272)
Q Consensus 125 r~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~~~l~~~L~~ 198 (272)
|++.++++. ++.++... ......+++++|+....+-. .++....++..+++++++++++..|..
T Consensus 354 --Gyiagsk~l--------id~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~ 423 (519)
T KOG1357|consen 354 --GYIAGSKEL--------IDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQK 423 (519)
T ss_pred --ceecCcHHH--------HhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhc
Confidence 999999888 33332221 12233356666665544443 233466788889999999999999999
Q ss_pred CCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024 199 LGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEA 270 (272)
Q Consensus 199 ~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~ 270 (272)
.|+.+++..+++.+-+.+- ......+..+++++ +|.++-..... |.-.+..|++. ..++|+++++++.+.+
T Consensus 424 ~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~ 498 (519)
T KOG1357|consen 424 MGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDR 498 (519)
T ss_pred CcEEEecCCCCCcceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhh
Confidence 9999999888876544442 22444666677777 66665444333 44466778886 4489999999998765
No 275
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.53 E-value=5.3e-13 Score=109.72 Aligned_cols=230 Identities=16% Similarity=0.084 Sum_probs=144.1
Q ss_pred cccceeEEeecCCCCCcccCCCC-----------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 20 GKYCNIEYLECGPGNNFFPDLKG-----------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 20 ~~~g~~~~~~~~~~~~~~~dl~~-----------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
+..+...+++..+..+..+++++ ..++.++++.+.+|.-|.++|++++++|.++|+++++.+..|.+..
T Consensus 94 ~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~ 173 (342)
T COG2008 94 EFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARL 173 (342)
T ss_pred HHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHH
Confidence 33445566666664455555332 2345555555666688999999999999999999999999999986
Q ss_pred ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH--HHH
Q 036024 89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ--AGG 166 (272)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~a~ 166 (272)
+...-...+++.++...-| ++..++||..++|+ |.++..+..+ ++++..++.......+.... ...
T Consensus 174 ~nA~valg~~~~~~~~~~D--~v~~~~tK~g~~~~---gAiv~gn~~~-------~~~a~~~rK~~Ggl~~k~r~laA~~ 241 (342)
T COG2008 174 ANALVALGVALKTIKSYVD--SVSFCLTKGGGAPV---GAIVFGNRDF-------AKRARRWRKRAGGLMRKARFLAAQG 241 (342)
T ss_pred HHHHHHcCCCHHHHHhhCC--EEEEecccCCccee---eeEEEcCHHH-------HHHHHHHHHHhcccHhhhhHHHHHH
Confidence 5333222355556543333 45557899998776 7766655443 44554444333222222222 223
Q ss_pred HHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCC
Q 036024 167 LACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGP 244 (272)
Q Consensus 167 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~ 244 (272)
...|++..+ ...-++-.++++.|.+.+... |+++..|..++.+++.++... ........+...|+.+.+++
T Consensus 242 ~~~l~~~~~---~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i~~l~~~~~~~~~~~~~~~~~---- 314 (342)
T COG2008 242 LYALEDDVW---RLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAIEALRLAGALFYRGVLIGAHG---- 314 (342)
T ss_pred HHHHhccHH---HHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHHHHHHHhhchhheeeeeccCCC----
Confidence 344443333 233345556689999999954 999998888999999998421 11122222333355553322
Q ss_pred CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 245 GGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 245 ~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
..+||.. ..+++++++++..++.+
T Consensus 315 ---~~vRfvts~a~~~edv~~~~~~~~~~ 340 (342)
T COG2008 315 ---EIVRFVTSWATSEEDVDELVAAIKAL 340 (342)
T ss_pred ---ceEEEEeeccCCHHHHHHHHHHHHHh
Confidence 3688774 56899999999999875
No 276
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.53 E-value=1.2e-12 Score=114.94 Aligned_cols=204 Identities=17% Similarity=0.160 Sum_probs=130.8
Q ss_pred CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.+|++-..+...|.. .+++.+++|.++|++||+++|+||++.++...|...........+| + -+++|.+| .|
T Consensus 215 ~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD--i--vt~gK~l~-gG 289 (442)
T PRK13360 215 TIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD--L--LTCAKGLT-NG 289 (442)
T ss_pred cEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc--e--eeeeeccc-cC
Confidence 44455554446666776 4677799999999999999999999976644443322222222344 2 27899997 66
Q ss_pred -cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024 124 -VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195 (272)
Q Consensus 124 -~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (272)
+.+|.++++++.. +.+.. ....++++.++++..++.+.++.... +...++.+++.+++++.
T Consensus 290 ~~P~gav~~~~~i~--------~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~ 358 (442)
T PRK13360 290 AIPMGAVFVSSEIH--------DAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER---EGLLTRAARLAPYWEDA 358 (442)
T ss_pred ccceEEEEEcHHHH--------HHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence 6899988888773 32221 12334555788888888887763222 24667778888888888
Q ss_pred HHhCC-CeEecC--CCceEEEeecCC------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHH
Q 036024 196 LASLG-IKVYGG--INAPYVWAHFPG------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEA 264 (272)
Q Consensus 196 L~~~g-~~~~~~--~~~~~~~i~l~~------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~ 264 (272)
|+++. ...... ..|.+.-+.+.. ....++...++++ ||.+.++ .+.+||+ +..|++|++++
T Consensus 359 l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~-Gvl~~~~-------~~~lr~~Ppl~~t~~eid~~ 430 (442)
T PRK13360 359 LHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEK-GLMIRYT-------GDILALSPPLIIEEAQIDEL 430 (442)
T ss_pred HHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHC-CcEEEec-------CCEEEEeCCCccCHHHHHHH
Confidence 87652 211111 124444444421 1123556666655 9999653 2469999 56799999999
Q ss_pred HHHHHHhC
Q 036024 265 SRRLEALF 272 (272)
Q Consensus 265 l~~l~~~l 272 (272)
+++|++++
T Consensus 431 ~~~l~~~l 438 (442)
T PRK13360 431 FDILAQAL 438 (442)
T ss_pred HHHHHHHH
Confidence 99998764
No 277
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=9.1e-13 Score=115.13 Aligned_cols=78 Identities=31% Similarity=0.425 Sum_probs=63.0
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
+++++|++++|+||||.+++ +++|.++|+++++++|+|++|...... .++ ... . .+++.|++|.+|.+|
T Consensus 142 ~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~---~p~-~~g--a--Divv~S~tK~l~G~g 210 (425)
T PRK06084 142 ERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC---RPF-EHG--A--DIVVHSLTKYIGGHG 210 (425)
T ss_pred cCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---Chh-hcC--C--CEEEECchhcccccc
Confidence 67899999999999999988 899999999999999999999742211 122 221 1 299999999998788
Q ss_pred cceeEEEec
Q 036024 124 VRLGWTVVP 132 (272)
Q Consensus 124 ~r~G~~~~~ 132 (272)
.++|.+++.
T Consensus 211 ~~~gG~v~~ 219 (425)
T PRK06084 211 TSIGGIVVD 219 (425)
T ss_pred cceeEEEEe
Confidence 898887775
No 278
>PRK05965 hypothetical protein; Provisional
Probab=99.53 E-value=1.3e-12 Score=115.37 Aligned_cols=205 Identities=11% Similarity=0.057 Sum_probs=135.5
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++-..+...|.. .+++.+++|.++|++||+++|.||+..++...+...........+|.+ +++|.+| .
T Consensus 214 ~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gKgl~-g 288 (459)
T PRK05965 214 DNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM----TVAKGLT-S 288 (459)
T ss_pred CceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE----Eechhhc-c
Confidence 456666666556666764 566779999999999999999999999875554333333333345533 4799998 8
Q ss_pred c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
| +.+|.++++++. .+.+.. .....+++.++++..|+.+.++.... +...++.+++.+++.+
T Consensus 289 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~g~~l~~ 357 (459)
T PRK05965 289 GYVPMGAVLMSDHV--------YQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE---GGLLANGQKAGPRFAA 357 (459)
T ss_pred CCcceeEEEEcHHH--------HHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence 8 499999999888 333321 23445666888888888888763322 3455666777777777
Q ss_pred HHHhC---CC-eEecCCCceEEEeecCC-C------C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024 195 TLASL---GI-KVYGGINAPYVWAHFPG-R------K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG 256 (272)
Q Consensus 195 ~L~~~---g~-~~~~~~~~~~~~i~l~~-~------~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~ 256 (272)
.|+++ +. .-.. ..|.++-+++.. . + ...+...+++ .|+.+.+. +.+.+|+. +..
T Consensus 358 ~l~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gll~~~~------g~~~i~~~PpL~i 429 (459)
T PRK05965 358 GLDALRAHPLVGDVR-GRGLLGALELVADKATKTPFDAALDPADRIFDRAYA-NGLVFRAF------GDGVLGFAPALCC 429 (459)
T ss_pred HHHhhccCCCEEEEe-ecceEEEEEEeccccccCCCCchhHHHHHHHHHHHh-CCeEEEec------CCcEEEEECCCcC
Confidence 77664 21 1112 246666666631 1 0 1234444444 59999642 24678888 566
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
+++|+++++++|.++|
T Consensus 430 t~~ei~~~~~~l~~~l 445 (459)
T PRK05965 430 TEGEFDLIFERTRKTL 445 (459)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 279
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=1.1e-12 Score=114.63 Aligned_cols=204 Identities=12% Similarity=0.055 Sum_probs=133.9
Q ss_pred CCceEEEEec-CCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCS-PNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.++++-- .+...|.. .+++.+++|.++|++|++++|+||++.++...+...........+|. + +++|.++
T Consensus 199 ~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi--~--t~gK~l~- 273 (422)
T PRK05630 199 ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDI--M--CVGKALT- 273 (422)
T ss_pred hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCe--e--eeechhh-
Confidence 3556666654 26677775 45678999999999999999999999876433332222223334442 2 7899996
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHHh------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFNR------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
.| ..+|+++++++. .+.+.. +....+++.++++..++.+.++.... +...++.+++.++|++
T Consensus 274 gG~~p~~av~~~~~i--------~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~---~~~~~~~~~~g~~l~~ 342 (422)
T PRK05630 274 GGFMSFAATLCTDKV--------AQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET---GMWRKQVKRIEAELIA 342 (422)
T ss_pred cCccccceeeccHHH--------HHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh---CcHHHHHHHHHHHHHH
Confidence 67 478999998887 343321 12344556788888888887763322 2345577777777777
Q ss_pred HHHhCC----CeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHH
Q 036024 195 TLASLG----IKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRR 267 (272)
Q Consensus 195 ~L~~~g----~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~ 267 (272)
.|+.+. +.-.. ..|.++-+++... ....+...+++ +|+.+.+. + +.+||. +..+++|+++++++
T Consensus 343 ~L~~l~~~~~v~~vR-g~Gl~~~ie~~~~~~~~~~~~~~~~-~Gl~~~~~------g-~~l~~~PpL~it~~~i~~~~~~ 413 (422)
T PRK05630 343 GLSPLAHLPGVADVR-VLGAIGVVEMEQPVDMEEATQAAVD-HGVWLRPF------G-RLVYVMPPYITTSEQIAQICAA 413 (422)
T ss_pred HHHHhhcCCCeeeee-ccccEEEEEECCcccHHHHHHHHHH-CCeEEEec------C-CEEEEECCccCCHHHHHHHHHH
Confidence 776541 11111 2477777888632 23455555555 49999652 1 578888 46799999999999
Q ss_pred HHHhC
Q 036024 268 LEALF 272 (272)
Q Consensus 268 l~~~l 272 (272)
|+++|
T Consensus 414 l~~al 418 (422)
T PRK05630 414 LAAAV 418 (422)
T ss_pred HHHHH
Confidence 98875
No 280
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=9.4e-13 Score=116.14 Aligned_cols=205 Identities=12% Similarity=0.062 Sum_probs=131.5
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
+++.+|++-..++..+...+++.+++|.++|++||+++|.||++.++...|.......+...+|. + +++|.+| .|
T Consensus 228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDi--v--~~gKgl~-gG 302 (459)
T PRK06082 228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDI--L--CIGKGLG-GG 302 (459)
T ss_pred CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCE--E--Eeccccc-CC
Confidence 34555555444655555778888999999999999999999999976444432222233334452 2 3899998 77
Q ss_pred -cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 124 -VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 124 -~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
..+|.++++++.. ..+......++++.++++..++.+.++.... +...++.+++.++|++.|+++
T Consensus 303 ~~P~~av~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~ 371 (459)
T PRK06082 303 LVPIAAMITKDKYN--------TAAQISLGHYTHEKSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMRERLLEMKAK 371 (459)
T ss_pred CCcceEEEEcHHHH--------hhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhh
Confidence 4899999887762 1111111114555788888888887763222 345667777777777777664
Q ss_pred -CCe-EecCCCceEEEeecCCC------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHH
Q 036024 200 -GIK-VYGGINAPYVWAHFPGR------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASR 266 (272)
Q Consensus 200 -g~~-~~~~~~~~~~~i~l~~~------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~ 266 (272)
++. -.. ..|.++.+++... . ...+...++++ |+.+.+.. .+.+|++ +..+++|++++++
T Consensus 372 ~~~i~~vr-G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~------~~~i~~~Ppl~it~~eid~~~~ 443 (459)
T PRK06082 372 YPLIGDVR-GIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNN-GLSFKVSQ------GNVIQLSPPLIITREELTQALA 443 (459)
T ss_pred CCCeeeee-eccceeEEEEccCccccCccHHHHHHHHHHHHhC-CCEEEecC------CCEEEEeCCCccCHHHHHHHHH
Confidence 321 122 2466666776411 1 12344555554 99987531 3679998 4569999999999
Q ss_pred HHHHhC
Q 036024 267 RLEALF 272 (272)
Q Consensus 267 ~l~~~l 272 (272)
++++++
T Consensus 444 ~l~~~l 449 (459)
T PRK06082 444 ILEEAI 449 (459)
T ss_pred HHHHHH
Confidence 998764
No 281
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=1.4e-12 Score=114.89 Aligned_cols=207 Identities=12% Similarity=0.054 Sum_probs=131.5
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
.++.++++--.+...|.. .+++.+++|.++|++|++++|+||++.++...+.......+...+| +++ ++|.+| .
T Consensus 221 ~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD--iv~--~gK~l~-g 295 (457)
T PRK05639 221 DEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPD--LII--FGKGVA-S 295 (457)
T ss_pred CceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCC--EEE--echhhc-C
Confidence 456666665446666774 4677899999999999999999999987544443222222333444 222 899998 7
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|..+|+++++++.. + +.......+.+.++++..|+.+.++.... +...++.+++.++|++.|+++
T Consensus 296 G~pi~av~~~~~i~--------~-~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~ 363 (457)
T PRK05639 296 GMGLSGVIGRKELM--------D-LTSGSALLTPAANPVISAAAEATLEIIEE---ENLLKNALKVGEFIKKRLLEMKES 363 (457)
T ss_pred CCcceeEEehHHHH--------h-hcCCCcccCCCcCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 88899999988873 2 11111223445777777777777763222 344566666777777777663
Q ss_pred -CCeEecCCCceEEEeecCC-C---C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024 200 -GIKVYGGINAPYVWAHFPG-R---K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE 269 (272)
Q Consensus 200 -g~~~~~~~~~~~~~i~l~~-~---~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~ 269 (272)
++...-...|.++.+.+.. . + ...+...++++ |+.+.+.. ...+.+||. +..|++|+++++++|+
T Consensus 364 ~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~g----~~~~~lr~~Ppl~it~~~id~~~~~l~ 438 (457)
T PRK05639 364 FEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFEL-GLILPSYG----MFGNVIRITPPLVITKEIAEKGLEIME 438 (457)
T ss_pred CCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhC-CeEEeecC----CCCCEEEEeCCCccCHHHHHHHHHHHH
Confidence 3221111245666666531 0 1 22345555555 99996531 124689999 4569999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
+++
T Consensus 439 ~~l 441 (457)
T PRK05639 439 RAI 441 (457)
T ss_pred HHH
Confidence 764
No 282
>PLN02271 serine hydroxymethyltransferase
Probab=99.52 E-value=3.6e-12 Score=111.87 Aligned_cols=235 Identities=15% Similarity=0.123 Sum_probs=146.8
Q ss_pred eeEEeecCCCCCcccC---CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC-C
Q 036024 24 NIEYLECGPGNNFFPD---LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC-P 96 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~d---l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~ 96 (272)
+.++++++++ ...+| +++ .+++|+|++....|| ..++ .+++.++|+++|+++++|.+|........ .
T Consensus 272 ~~vpY~~d~~-~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~ 345 (586)
T PLN02271 272 ESLPYKVNPQ-TGYIDYDKLEEKALDFRPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKEC 345 (586)
T ss_pred EEEEcccccc-cCccCHHHHHHHhhhcCCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcC
Confidence 4556667644 33344 333 478999999887888 4455 88889999999999999999974333322 2
Q ss_pred CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC------------CcchHHHHHhhhhhccC-CcchHHH
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS------------GFPVINDFNRIICTCFN-GASNIAQ 163 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~~ 163 (272)
.+.... .| ++.+|.+|++ .|-|.|.+..+++..... ...+.+.+.....+... ++.....
T Consensus 346 ~sP~~~---aD--vvt~TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~I 418 (586)
T PLN02271 346 VNPFDY---CD--IVTSTTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHI 418 (586)
T ss_pred CCCCcC---Cc--EEEeCCcccC--CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHH
Confidence 111111 12 8999999998 334458877765421100 00123333333322222 2222333
Q ss_pred HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCC
Q 036024 164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSG 241 (272)
Q Consensus 164 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~ 241 (272)
.+....+........++..+++.+|++.|.+.|.+.|+++... -+...+++++.... +....++.|++.||.++--.-
T Consensus 419 AalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~i 498 (586)
T PLN02271 419 AALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAI 498 (586)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccC
Confidence 4344444422223448889999999999999999999998653 34667889997432 457788889999999854333
Q ss_pred CC---CCCCCeEEEEc------cCCHHHHHHHHHHHHHh
Q 036024 242 FG---PGGEEYIRISG------FGHRESILEASRRLEAL 271 (272)
Q Consensus 242 ~~---~~~~~~~R~s~------~~~~~~i~~~l~~l~~~ 271 (272)
++ +..++.+|++. ...++|+++..+.|.++
T Consensus 499 P~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~ 537 (586)
T PLN02271 499 FGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRA 537 (586)
T ss_pred CCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHH
Confidence 32 22357899994 12467777766666554
No 283
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.52 E-value=1.1e-12 Score=114.68 Aligned_cols=205 Identities=14% Similarity=0.114 Sum_probs=126.4
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.+|++-......|... +++.+++|.++|++||+++|+||++.++ ..+...........+| ++ +++|.+| .
T Consensus 200 ~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PD--i~--~~gK~lg-g 273 (433)
T PRK00615 200 HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPD--IT--VYGKILG-G 273 (433)
T ss_pred CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCC--eE--EEccccc-C
Confidence 3455555544466667755 4677999999999999999999999866 2332111122222344 22 4899998 7
Q ss_pred ccceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH--
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA-- 197 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~-- 197 (272)
|+.+|+++++++. .+.+.. ....++.+.+++...|+.+.++.... +...++++++.+++.+.|+
T Consensus 274 G~p~~av~~~~~i--------~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~---~~~~~~~~~~g~~l~~~l~~~ 342 (433)
T PRK00615 274 GLPAAAVVAHKSI--------MDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE---QGFYTQLSTLEQNFLSPIEEM 342 (433)
T ss_pred CcceeeeeecHHH--------HhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHH
Confidence 7888999998887 343321 11223444677888888887763322 2345566666666655554
Q ss_pred --hCCCeEecCCCceEEEeecCCCC--------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHH
Q 036024 198 --SLGIKVYGGINAPYVWAHFPGRK--------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESI 261 (272)
Q Consensus 198 --~~g~~~~~~~~~~~~~i~l~~~~--------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i 261 (272)
+.|+.+.....|.++.+.+.... ...+...++++ ||.+.|.... .. =+|...+++|+
T Consensus 343 ~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~-----~~-~ls~~ht~~di 415 (433)
T PRK00615 343 IRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSPFE-----AS-FLSSAHSMENL 415 (433)
T ss_pred HHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCcccc-----cc-ceecCCCHHHH
Confidence 44554332224556666664210 12455556555 9999765411 11 25666799999
Q ss_pred HHHHHHHHHhC
Q 036024 262 LEASRRLEALF 272 (272)
Q Consensus 262 ~~~l~~l~~~l 272 (272)
+++++++++++
T Consensus 416 d~~~~a~~~~~ 426 (433)
T PRK00615 416 DYAQNVLIDSL 426 (433)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 284
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.52 E-value=5e-12 Score=118.92 Aligned_cols=253 Identities=11% Similarity=0.045 Sum_probs=160.4
Q ss_pred cccccCccc--chHHhcccc-eeEEeecCCCCCcccC-CCC-C----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 6 SVIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 6 ~~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
+++.+.+.+ ....+...| +++.+|.+.++..+++ +++ . +++++|++++|+|-+|...+ +++|+++|++
T Consensus 618 ~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~ 694 (993)
T PLN02414 618 VCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHD 694 (993)
T ss_pred EEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHH
Confidence 444444444 555566678 9999999865433333 222 1 36889999999999998854 9999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcchH-H---HHH
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPVI-N---DFN 148 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~~-~---~~~ 148 (272)
+|+.+++|.++...... ...+..+..+ ++.+|.+|.|+.| |--+|.+.+.+.+....--+.. . ...
T Consensus 695 ~Galv~vDgAq~~a~~~--l~~p~~~GaD----~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~ 768 (993)
T PLN02414 695 NGGQVYMDGANMNAQVG--LTSPGFIGAD----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPR 768 (993)
T ss_pred cCCEEEEEecCHHhccC--cCCccccCCC----EEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCccc
Confidence 99999999998641111 1222333222 8899999977522 3448999888766421111100 0 011
Q ss_pred hhhhhccCC------cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCce--EEEeecC--
Q 036024 149 RIICTCFNG------ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAP--YVWAHFP-- 217 (272)
Q Consensus 149 ~~~~~~~~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~--~~~i~l~-- 217 (272)
+.......+ .+.....++...+..-+.+.+++..++...+++++++.|++. ++.+.++.+.. =+.+.++
T Consensus 769 r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l 848 (993)
T PLN02414 769 PEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPF 848 (993)
T ss_pred ccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEecccc
Confidence 111110111 122333445555666677888899999999999999999873 44444432221 1223443
Q ss_pred ----CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 218 ----GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 218 ----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+.+..++.++|+ ++||.... ..| + ..+.+|++. +.+++|+|+++++|+++
T Consensus 849 ~~~~g~~~~di~krL~-d~Gihapt-~~~-p-v~~~lmiepTE~~skeelDrf~~al~~i 904 (993)
T PLN02414 849 KNTAGIEPEDVAKRLM-DYGFHAPT-MSW-P-VPGTLMIEPTESESKAELDRFCDALISI 904 (993)
T ss_pred ccccCCCHHHHHHHHH-HcCcEEee-ecc-c-cCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence 245578888888 66998644 334 3 378899995 66999999999998764
No 285
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.52 E-value=1.8e-12 Score=113.99 Aligned_cols=205 Identities=18% Similarity=0.208 Sum_probs=132.8
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
.++.++++-..+...|... +++.+++|.++|+++|+++|+||++.++...|...........+| +-+++|.++ .
T Consensus 217 ~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD----i~~~gK~l~-g 291 (445)
T PRK09221 217 STIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD----IITFAKGLT-N 291 (445)
T ss_pred CcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC----EEEeccccc-c
Confidence 3455666655576777754 566799999999999999999999986544443322223333344 237899997 5
Q ss_pred c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
| ..+|.++++++.. +.+.. .....+++.++++..++.+.++.... +...++.+++.+++++
T Consensus 292 G~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~ 360 (445)
T PRK09221 292 GAIPMGAVIASDEIY--------DAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE---EDLFERAAELAPYFED 360 (445)
T ss_pred CcccceeeEEcHHHH--------HhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence 6 6789988888773 32211 12334555788887777777763322 2456788888888888
Q ss_pred HHHhC-CCeEec--CCCceEEEeecCC--C----ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHH
Q 036024 195 TLASL-GIKVYG--GINAPYVWAHFPG--R----KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILE 263 (272)
Q Consensus 195 ~L~~~-g~~~~~--~~~~~~~~i~l~~--~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~ 263 (272)
.|+++ +..... ...|.+..+.+.. . ....+...++++ ||.+.++ .+.+||+ +..+++|+++
T Consensus 361 ~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~-------~~~lr~~Ppl~~t~~eid~ 432 (445)
T PRK09221 361 AVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEK-GLLVRYT-------GDTIALSPPLIIEKAQIDE 432 (445)
T ss_pred HHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHC-CeEEeec-------CCEEEEECCccCCHHHHHH
Confidence 88775 222111 1134555555532 1 123455666555 9999653 2479999 5679999999
Q ss_pred HHHHHHHhC
Q 036024 264 ASRRLEALF 272 (272)
Q Consensus 264 ~l~~l~~~l 272 (272)
++++|+++|
T Consensus 433 ~~~~l~~~l 441 (445)
T PRK09221 433 LVDALGDAL 441 (445)
T ss_pred HHHHHHHHH
Confidence 999998864
No 286
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.51 E-value=1.5e-12 Score=113.98 Aligned_cols=204 Identities=12% Similarity=0.019 Sum_probs=132.2
Q ss_pred CceEEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++.+|++-.. ++-.|. .++.+.+++|.++|++|++++|+||++.++...+........+..+| ++ +++|.++ .
T Consensus 207 ~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD--i~--~~gK~l~-g 281 (427)
T TIGR00508 207 EIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD--IL--CVGKALT-G 281 (427)
T ss_pred cEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC--EE--Eechhhh-c
Confidence 4445555432 555565 44789999999999999999999999977644443222222322344 23 3799997 7
Q ss_pred cc-ceeEEEecccccccCCcchHHHHHhh-----hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 036024 123 GV-RLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196 (272)
Q Consensus 123 g~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 196 (272)
|+ .++.++.++++ .+.+... ....++..++++..++.+.++.... +...++.+++.++|++.|
T Consensus 282 G~~p~~a~~~~~~~--------~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L 350 (427)
T TIGR00508 282 GYMTLSATVTTDKV--------AQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE---GEWQKQVSAIENQLKREL 350 (427)
T ss_pred CcccceEEEEcHHH--------HHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHH
Confidence 74 67888887776 4444321 1223334677888877777762222 234678888888888888
Q ss_pred HhCCCe-EecC--CCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024 197 ASLGIK-VYGG--INAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEA 270 (272)
Q Consensus 197 ~~~g~~-~~~~--~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~ 270 (272)
++++.. .... ..|.++.+.+.. .....+..+++++ ||.+.+.. ..+|++. ..+++|++++++++++
T Consensus 351 ~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~-Gv~~~~~~-------~~l~~~ppl~~t~~~id~~~~~l~~ 422 (427)
T TIGR00508 351 SPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVEQ-GVWIRPFG-------KLIYVMPPYIITTEQLQKLTAALIE 422 (427)
T ss_pred HHhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHHHC-CeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 876321 1111 136667777753 2345666666665 99996532 3689974 4799999999999988
Q ss_pred hC
Q 036024 271 LF 272 (272)
Q Consensus 271 ~l 272 (272)
+|
T Consensus 423 ~l 424 (427)
T TIGR00508 423 AL 424 (427)
T ss_pred HH
Confidence 75
No 287
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.51 E-value=2.3e-12 Score=111.45 Aligned_cols=241 Identities=15% Similarity=0.095 Sum_probs=138.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...+...| +++.++++++ ++.+|++. .+++|+|+ |+||+|...+ +++|.++|++
T Consensus 74 d~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~-~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~ 146 (379)
T PRK11658 74 DEVITPSLTWVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGER 146 (379)
T ss_pred CEEEECCCcHHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHH
Confidence 56777665554 556677788 9999999866 56566333 26788877 5567898865 8899999999
Q ss_pred cCCEEEEcccCCc-cccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc-
Q 036024 77 NGSIIIFDSAYAA-YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC- 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (272)
+|+++|+|++|.. ..+.+. .+... . +.+.||++...+++.+.|+++.+++.+ .+++.......
T Consensus 147 ~gi~vi~D~a~a~g~~~~~~--~~g~~----g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~-------~~~~~~~~~~G~ 211 (379)
T PRK11658 147 YGIPVIEDAAHAVGTYYKGR--HIGAR----G--TAIFSFHAIKNITCAEGGLVVTDDDEL-------ADRLRSLKFHGL 211 (379)
T ss_pred cCCeEEEECCCccCCeECCe--ecCCC----C--CEEEeCCCCCcCcccCceEEEECCHHH-------HHHHHHHHHcCC
Confidence 9999999999984 223221 12111 1 124455533333455678888764442 22332221100
Q ss_pred ---------------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EecCCC----
Q 036024 155 ---------------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK-VYGGIN---- 208 (272)
Q Consensus 155 ---------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~---- 208 (272)
..........|+....+. ..+++..++-+++.+.+++.|+++++. +..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql---~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~ 288 (379)
T PRK11658 212 GVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQL---AKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQH 288 (379)
T ss_pred CcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCce
Confidence 000111222333333332 445777788888888888999877533 222211
Q ss_pred ce-EEEeecC----CCChHHHHHHHHHhcCeEeeCCCCCCC------------C---------CCCeEEEEcc--CCHHH
Q 036024 209 AP-YVWAHFP----GRKSWDVFAEILEKTHITTVPGSGFGP------------G---------GEEYIRISGF--GHRES 260 (272)
Q Consensus 209 ~~-~~~i~l~----~~~~~~~~~~ll~~~gi~v~~g~~~~~------------~---------~~~~~R~s~~--~~~~~ 260 (272)
.+ ...+.++ +.+..++...| ++.||.+.. .|.+ . ....+.+.+. .++++
T Consensus 289 ~~~~~~~~~~~~~~~~~r~~~~~~L-~~~gI~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~ 365 (379)
T PRK11658 289 AWHLFIIRVDEERCGISRDALMEAL-KERGIGTGL--HFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDAD 365 (379)
T ss_pred eEEEEEEEECCccccCCHHHHHHHH-HHCCCCCcc--cCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHH
Confidence 22 2233443 22445566655 455988652 1211 0 0233444443 47899
Q ss_pred HHHHHHHHHHhC
Q 036024 261 ILEASRRLEALF 272 (272)
Q Consensus 261 i~~~l~~l~~~l 272 (272)
+++.++.|++++
T Consensus 366 ~~~i~~~i~~~~ 377 (379)
T PRK11658 366 VDRVITALQQIA 377 (379)
T ss_pred HHHHHHHHHHHH
Confidence 999999998763
No 288
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.50 E-value=3.7e-12 Score=111.12 Aligned_cols=254 Identities=15% Similarity=0.093 Sum_probs=154.7
Q ss_pred ccccCccc--chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-
Q 036024 7 VIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN- 77 (272)
Q Consensus 7 ~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~- 77 (272)
++.+..-+ +...++..| +++.+|.+++ ++.+|++. .+++.+|+++..||.||.+-| +++|+++|+++
T Consensus 141 ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~-~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i~~I~~i~~~~~ 216 (431)
T TIGR01788 141 LVMGSNVQVCWEKFARYFDVELREVPMDPG-RYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---VKALNDALDEYN 216 (431)
T ss_pred EEEcCcchHHHHHHHHHcCceeEEEecCCC-ceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---HHHHHHHHHHHH
Confidence 44444333 555666678 9999999874 45555433 267888999999999999977 89999999999
Q ss_pred -----CCEEEEcccCCcccc----CCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccc-cccCCcchHHH
Q 036024 78 -----GSIIIFDSAYAAYVT----DGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEEL-LFSSGFPVIND 146 (272)
Q Consensus 78 -----~~~vi~D~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~-~~~~~~~~~~~ 146 (272)
++++.+|.+|+.+.. +..+..+. . ...-.+.-|.+|.+ |..| +|+++..+.. ....+..-.+.
T Consensus 217 ~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~---~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~y 290 (431)
T TIGR01788 217 AKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-L---PRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNY 290 (431)
T ss_pred hhhCCCceEEEecccHHHHHHHhCCCchhhcC-C---CCceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccc
Confidence 999999999995432 22111111 1 11225666889976 6556 7988887642 11100000001
Q ss_pred HHhhhhhccCCcchHHHHH--HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC-CCceEEEeecCC----
Q 036024 147 FNRIICTCFNGASNIAQAG--GLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG-INAPYVWAHFPG---- 218 (272)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~a--~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~i~l~~---- 218 (272)
+...........+..+-.+ ....+...+...+++..++..+.++++.+.|++. ++++..+ .....+.+++++
T Consensus 291 l~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~ 370 (431)
T TIGR01788 291 LGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADP 370 (431)
T ss_pred cCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCC
Confidence 1100000011111111111 2222333445677888999999999999999988 5888875 456667777763
Q ss_pred -CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 219 -RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 219 -~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
.+..++...|. +.|+.+..-.... ..+...+|+++. .+++.+++++..|+.+
T Consensus 371 ~~~~~~l~~~L~-~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~ 426 (431)
T TIGR01788 371 GYTLYDLSHRLR-ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAA 426 (431)
T ss_pred CcCHHHHHHHHH-HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 34456566555 5598753322111 223456899973 3677888888888765
No 289
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.50 E-value=2.1e-12 Score=113.73 Aligned_cols=204 Identities=15% Similarity=0.107 Sum_probs=134.9
Q ss_pred CCceEEEEec-CCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCS-PNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.+|++-- .+...|.. .+++.+++|.++|++||+++|.||++.++...+.......+...+|.+ +++|.+|
T Consensus 220 ~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDiv----t~gKgl~- 294 (453)
T PRK06943 220 GKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFL----CLSKGIS- 294 (453)
T ss_pred CceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeE----eeehhhc-
Confidence 4566666654 36666774 577889999999999999999999998875444333333333345533 4699998
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHHh------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFNR------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
.| +.+|.++++++. .+.+.. ....++++.++++..++.+.++.... +...++.+++-+++.+
T Consensus 295 gG~~Pi~av~~~~ei--------~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~ 363 (453)
T PRK06943 295 GGYLPLSLVLSRDAI--------FAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE---DDVLARNARKSARLRA 363 (453)
T ss_pred cCcccceEEEEcHHH--------HHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence 78 589999999887 333321 12344555788888888888873322 3345566666667777
Q ss_pred HHHhC----CCeEecCCCceEEEeecC-CCC-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHH
Q 036024 195 TLASL----GIKVYGGINAPYVWAHFP-GRK-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESIL 262 (272)
Q Consensus 195 ~L~~~----g~~~~~~~~~~~~~i~l~-~~~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~ 262 (272)
.|+++ ++.-.. ..|.++-+++. +.+ ...+...++++ ||.+.+.. +.+||+ +..|++|++
T Consensus 364 ~L~~l~~~~~v~~vr-G~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~-Gll~~~~g-------~~l~~~Ppl~it~~eid 434 (453)
T PRK06943 364 ALAPLAAHPQVRHLR-QRGTIFAFDVALDGDAARTFSRRFFEAALER-ELLLRPIG-------TTVYLMPPYVLDDDEIA 434 (453)
T ss_pred HHHHHhcCCCEEeEe-ccccEEEEEEccCCCcchHHHHHHHHHHHHC-CcEEEecC-------CEEEEeCCCcCCHHHHH
Confidence 77654 222222 24666667774 211 12345555554 99986531 358998 677999999
Q ss_pred HHHHHHHHhC
Q 036024 263 EASRRLEALF 272 (272)
Q Consensus 263 ~~l~~l~~~l 272 (272)
+++++|+++|
T Consensus 435 ~~~~~l~~al 444 (453)
T PRK06943 435 WLAERTRATL 444 (453)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 290
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.50 E-value=2.3e-12 Score=110.17 Aligned_cols=245 Identities=13% Similarity=0.082 Sum_probs=157.9
Q ss_pred cccccccCccc-ch-HHhcccc-e-eEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LE-DEVGKYC-N-IEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~-~~~~~~g-~-~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.+++.+.|+. +. ..++.+| . +..+..++...+.++ ++. -+.+++++....||+..+ +++++..+ ++
T Consensus 84 ~~vLv~g~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~---~~~v~~vhnETSTGv~np---v~~i~~~~--~~ 155 (374)
T TIGR01365 84 VDVLAWESFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF---KNDVVFTWNGTTSGVRVP---NGDFIPAD--RE 155 (374)
T ss_pred CeEEEECHHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC---CCCEEEecCCCchheecc---cccccccc--CC
Confidence 45777787777 56 8888888 5 777776655555444 332 134678899999999987 44544322 58
Q ss_pred CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc--------chHHH----
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF--------PVIND---- 146 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~--------~~~~~---- 146 (272)
+++|+|.+-+. ++.+..+... -+++.|..|++|+|+ -+++++++++.+.+... +..+.
T Consensus 156 ~lliVDavSs~---g~~~l~~d~i------Dv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~ 225 (374)
T TIGR01365 156 GLTICDATSAA---FAQDLDYHKL------DVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGG 225 (374)
T ss_pred CcEEEEccchh---cCCCCChhHC------cEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhcccccc
Confidence 99999999764 3333333322 288888999998643 26778887777532110 11110
Q ss_pred -H-Hhhh-hhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-CeEecC----CCceEEEeecC
Q 036024 147 -F-NRII-CTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-IKVYGG----INAPYVWAHFP 217 (272)
Q Consensus 147 -~-~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~----~~~~~~~i~l~ 217 (272)
+ .... ..+.++++....+++..++.....+ .++.+.++++++++.+++.++++| +.+... .+.....+.++
T Consensus 226 ~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~ 305 (374)
T TIGR01365 226 KLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVV 305 (374)
T ss_pred chhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeC
Confidence 0 0111 2345567777777777777533332 579999999999999999999998 666652 12233445554
Q ss_pred C--C-----C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024 218 G--R-----K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE 269 (272)
Q Consensus 218 ~--~-----~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~ 269 (272)
. . + ..++...+ ++.||.+.+|.. ......|||+. ..+.+|++.++..|+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~i~~G~~--~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 306 DPAIDALDEDAQADFAKELISTL-EKEGVAYDIGSY--RDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred CccccccccchhhHHHHHHHHHH-HHCCEEEecccc--ccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 2 2 1 34555554 555999987763 23347899994 348999999999886
No 291
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.50 E-value=4.5e-12 Score=108.18 Aligned_cols=231 Identities=15% Similarity=0.149 Sum_probs=137.4
Q ss_pred eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024 24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP 96 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~ 96 (272)
+.++++++++ ...+|.++ ..+||+|++-...+|- +-+.+++.++|++.|++++.|-+|. +++.++..
T Consensus 143 ~~~~y~~d~~-~~~ID~d~l~~~a~~~kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~ 216 (399)
T PF00464_consen 143 ESVPYPVDPD-TGLIDYDELEKLAKEHKPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLF 216 (399)
T ss_dssp EEEEEEB-TT-TSSB-HHHHHHHHHHH--SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS
T ss_pred EEEeeeeecC-CCeECHHHHHHHHhhcCCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehhee
Confidence 7889999976 56667444 2689999997555442 2458999999999999999999996 56666654
Q ss_pred CCccccCCCCCceEEEecCccccCCCccceeEEEecccc--cccC----CcchHHHHHhhhhhccCCcchHHHHHHH-Hh
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL--LFSS----GFPVINDFNRIICTCFNGASNIAQAGGL-AC 169 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~ 169 (272)
+++... .| ++.+|.+|++ +|-|.|.+.++... +... ...+.+.+.+...+...+.+.....|+. ..
T Consensus 217 ~~P~~~---AD--vvt~sThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAva 289 (399)
T PF00464_consen 217 PNPFPY---AD--VVTGSTHKTL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVA 289 (399)
T ss_dssp --GCCT---SS--EEEEESSGGG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHH
T ss_pred cCcccc---ce--EEEeeccccc--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHH
Confidence 444333 22 8999999999 66677988888110 0000 0112556655554444433444333333 33
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC---C
Q 036024 170 LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG---P 244 (272)
Q Consensus 170 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~---~ 244 (272)
+.+-.....++..+++-+|++.|.+.|.+.|+++... -++..+|+++... .+...+.+.|++.||.++.-.-.+ +
T Consensus 290 l~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~ 369 (399)
T PF00464_consen 290 LKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSP 369 (399)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTT
T ss_pred HhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCC
Confidence 3332234558899999999999999999999999753 3467889999632 244557778899999986422221 1
Q ss_pred CCCCeEEEEc------cCCHHHHHHHHHH
Q 036024 245 GGEEYIRISG------FGHRESILEASRR 267 (272)
Q Consensus 245 ~~~~~~R~s~------~~~~~~i~~~l~~ 267 (272)
.....+|++. ...++|+.+.-+.
T Consensus 370 ~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 370 FVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp TT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred CCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 2256899994 2257777776543
No 292
>PRK06105 aminotransferase; Provisional
Probab=99.50 E-value=3e-12 Score=113.11 Aligned_cols=204 Identities=11% Similarity=-0.001 Sum_probs=131.3
Q ss_pred CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.+|++-..+...|.. .+++.+++|.++|++||+++|+||++.++...+...........+| +-+++|.+| .|
T Consensus 218 ~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PD----i~~~gK~lg-gG 292 (460)
T PRK06105 218 TIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPD----ILVMSKQLS-SS 292 (460)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCC----eeeeecccc-cC
Confidence 45555555446666765 5788899999999999999999999977644443323223333444 226899998 66
Q ss_pred -cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024 124 -VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195 (272)
Q Consensus 124 -~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (272)
+.+|.++++++. .+.+.. ....++++.++++..++.+.++.... ++..++.+++.++|++.
T Consensus 293 ~~P~~av~~~~~i--------~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~ 361 (460)
T PRK06105 293 YQPLSAVLMNEKV--------YDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQAR 361 (460)
T ss_pred cccceEEEEcHHH--------HHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHH
Confidence 589999998877 344332 11334556788888877777763322 34566777777777777
Q ss_pred HHhC---CCeEecCCCceEEEeecCCC-------C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCH
Q 036024 196 LASL---GIKVYGGINAPYVWAHFPGR-------K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHR 258 (272)
Q Consensus 196 L~~~---g~~~~~~~~~~~~~i~l~~~-------~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~ 258 (272)
|+++ ++...-..-|.+.-+++... + ...+...++ ++||.+.+. .+.+|++ +..++
T Consensus 362 L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~-~~Gvl~~~~-------g~~i~l~Ppl~it~ 433 (460)
T PRK06105 362 LRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAH-EHGVISRAM-------GDTLAFCPPLIITA 433 (460)
T ss_pred HHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHH-HCCeEEEec-------CCEEEEECCCccCH
Confidence 7664 21111112466666666310 0 123444454 459999763 1478998 45599
Q ss_pred HHHHHHHHHHHHhC
Q 036024 259 ESILEASRRLEALF 272 (272)
Q Consensus 259 ~~i~~~l~~l~~~l 272 (272)
+|+++++++|.++|
T Consensus 434 ~eid~~~~~l~~~l 447 (460)
T PRK06105 434 AQVDEMVDRFGRAL 447 (460)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 293
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.50 E-value=2.7e-12 Score=113.35 Aligned_cols=206 Identities=15% Similarity=0.035 Sum_probs=132.1
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-..+.-.|.+. +++.++++.++|+++|+++|.||+..++...+.......+...+|.+ +++|.+| .|
T Consensus 231 ~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv----~~gKglg-gG 305 (464)
T PRK06938 231 LPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV----VLSKAIG-GS 305 (464)
T ss_pred ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEE----Eeecccc-CC
Confidence 455665544355557654 58889999999999999999999999875444322222333345533 4699998 88
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 199 (272)
+.+|.++++++. . .+......++++.++++..|+.+.++.... ++..++.+++-+++++.|+++
T Consensus 306 ~PlsAv~~~~~~-~--------~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~---~~l~~~~~~~G~~l~~~L~~l~~~~ 373 (464)
T PRK06938 306 LPLAVVVYREWL-D--------TWQPGAHAGTFRGNQMAMAAGSATLRYIKE---HRLAEHAAAMGERLREHLRQLQRDY 373 (464)
T ss_pred CceEEEeehhHh-h--------ccCCCCCCCCCCcCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999987653 1 111122445566888888888888873322 345556666666666666654
Q ss_pred CCeEecCCCceEEEeecCCC------------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHH
Q 036024 200 GIKVYGGINAPYVWAHFPGR------------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESIL 262 (272)
Q Consensus 200 g~~~~~~~~~~~~~i~l~~~------------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~ 262 (272)
++...-...|.++.+++... + ...+...+++ +|+.+.++..+ .+.+||. +..|++|++
T Consensus 374 ~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~g~~----~~~l~~~Ppl~it~~eid 448 (464)
T PRK06938 374 PQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR-RGLILELGGRH----GSVVRFLPPLIITAEQID 448 (464)
T ss_pred CCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-CCeEEeecCCC----CCEEEEECCCccCHHHHH
Confidence 32111112466666766311 0 1234445555 59999764321 3578987 456999999
Q ss_pred HHHHHHHHhC
Q 036024 263 EASRRLEALF 272 (272)
Q Consensus 263 ~~l~~l~~~l 272 (272)
+++++++++|
T Consensus 449 ~~~~~l~~~l 458 (464)
T PRK06938 449 EVAEIFAEAV 458 (464)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 294
>PRK07482 hypothetical protein; Provisional
Probab=99.50 E-value=4.5e-12 Score=111.98 Aligned_cols=207 Identities=12% Similarity=0.001 Sum_probs=134.0
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.+|++-..+...|.. .+++.+++|.++|++||+++|.||++.++...+...........+|.+ +++|.+| .
T Consensus 219 ~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gKgl~-g 293 (461)
T PRK07482 219 DTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLI----TVAKGLT-S 293 (461)
T ss_pred CcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEE----EEccccc-c
Confidence 345666665446666776 467789999999999999999999999875444333333333345533 4799998 7
Q ss_pred cc-ceeEEEecccccccCCcchHHHHH-------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 123 GV-RLGWTVVPEELLFSSGFPVINDFN-------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 123 g~-r~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
|. .+|.++++++. .+.+. ......+++.++++..|+.+.++.... +...++.+++.+++.+
T Consensus 294 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~---~~l~~~~~~~g~~l~~ 362 (461)
T PRK07482 294 AYAPLSGSIVGEKV--------WDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILER---ENLVGNAAEVGAYFRA 362 (461)
T ss_pred CccccceeeecHHH--------HHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHH
Confidence 85 89998888876 33332 122345566888888888888873322 2344556666666666
Q ss_pred HHHhC----CCeEecCCCceEEEeecCC-C------C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024 195 TLASL----GIKVYGGINAPYVWAHFPG-R------K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG 256 (272)
Q Consensus 195 ~L~~~----g~~~~~~~~~~~~~i~l~~-~------~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~ 256 (272)
.|+++ ++...-...|.++.+++.. . + ...+...++++ ||.+.++. +.+.+|+. +..
T Consensus 363 ~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~~-----~~~~i~~~Ppl~i 436 (461)
T PRK07482 363 RLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALER-GVIARAMP-----HGDILGFAPPLVL 436 (461)
T ss_pred HHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHC-CcEEecCC-----CCCEEEEeCCCCC
Confidence 66543 3221111246676777741 1 0 12345555555 99986421 13568887 567
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
+++|+++++++|+++|
T Consensus 437 t~~ei~~~~~~l~~~l 452 (461)
T PRK07482 437 TRAEADEIVAIAKDAV 452 (461)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 295
>PRK07480 putative aminotransferase; Validated
Probab=99.49 E-value=2.9e-12 Score=112.95 Aligned_cols=203 Identities=11% Similarity=0.027 Sum_probs=129.7
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
.++.+|++-..+...|.. .+++.+++|.++|++||+++|.||++.++...+...........+|. -+++|.+| .
T Consensus 218 ~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDi----v~~gK~l~-g 292 (456)
T PRK07480 218 DNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDL----MTIAKGLT-S 292 (456)
T ss_pred CcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCe----eeeehhhc-c
Confidence 355566665456666775 46667999999999999999999999876444433333333334452 36799998 7
Q ss_pred cc-ceeEEEecccccccCCcchHHHHH----hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHH-HHHHHHHHHHH
Q 036024 123 GV-RLGWTVVPEELLFSSGFPVINDFN----RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYY-KENTKILIDTL 196 (272)
Q Consensus 123 g~-r~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~-~~~~~~l~~~L 196 (272)
|. .+|.++++++. .+.+. .+...++++.++++..|+.+.++.... +...++. +++.+++++.|
T Consensus 293 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~~g~~l~~~l 361 (456)
T PRK07480 293 GYIPMGAVGVGDRV--------AEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD---EGIVERVRDDTGPYLQKRL 361 (456)
T ss_pred CCccceEEEEcHHH--------HHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHH
Confidence 74 89999998877 34331 123445666888888888888873222 2344455 35555666666
Q ss_pred HhC---CC--eEecCCCceEEEeecCCC--------C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCC
Q 036024 197 ASL---GI--KVYGGINAPYVWAHFPGR--------K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGH 257 (272)
Q Consensus 197 ~~~---g~--~~~~~~~~~~~~i~l~~~--------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~ 257 (272)
+++ ++ .+.+ .|.+.-+++... . ...+...+++ .||.+.+. .+.+|++. ..+
T Consensus 362 ~~l~~~~~i~~vrG--~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~-------~~~l~~~Ppl~it 431 (456)
T PRK07480 362 RELADHPLVGEVRG--VGLVGAIELVKDKATRERFEAGGGVGTICRDHCFA-NGLIMRAV-------GDRMIISPPLVIT 431 (456)
T ss_pred HHhhcCCCeeeEEe--ecceEEEEEeccccccccCcchhhHHHHHHHHHHH-CCcEEeec-------CCEEEEECCCCCC
Confidence 543 32 2222 466666666310 1 1233444555 49998642 14688884 459
Q ss_pred HHHHHHHHHHHHHhC
Q 036024 258 RESILEASRRLEALF 272 (272)
Q Consensus 258 ~~~i~~~l~~l~~~l 272 (272)
++|+++++++|+++|
T Consensus 432 ~~eid~~~~~l~~al 446 (456)
T PRK07480 432 HAEIDELVEKARKAL 446 (456)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 296
>PRK07481 hypothetical protein; Provisional
Probab=99.49 E-value=4.1e-12 Score=111.97 Aligned_cols=205 Identities=16% Similarity=0.103 Sum_probs=132.2
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.+|++-..+.-.|.. .+++.+++|.++|+++|+++|.||++.++...+...........+|.+ +++|.+| .
T Consensus 212 ~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gKgl~-g 286 (449)
T PRK07481 212 DTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIM----CLAKGIT-S 286 (449)
T ss_pred CcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEE----EEeeccc-C
Confidence 456666666556666775 466779999999999999999999999765444322222233344532 4699998 7
Q ss_pred c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
| +.+|.++++++. .+.+.. .....+++.++++..|+.+.++.... +...++.+++.+++++
T Consensus 287 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~ 355 (449)
T PRK07481 287 GYVPLGATMVNARI--------ADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR---EDLPANAAKRGAYLLE 355 (449)
T ss_pred CCcCceEEEEcHHH--------HHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHH
Confidence 7 589999998877 344422 12344555788888888888763322 3455666666777777
Q ss_pred HHHhC----CCeEecCCCceEEEeecCCC-------C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024 195 TLASL----GIKVYGGINAPYVWAHFPGR-------K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG 256 (272)
Q Consensus 195 ~L~~~----g~~~~~~~~~~~~~i~l~~~-------~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~ 256 (272)
.|+++ ++...-...|.++.+.+... + ...+...++++ |+.+.+.. ..+|++ +..
T Consensus 356 ~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~g-------~~i~l~Ppl~i 427 (449)
T PRK07481 356 GLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAREN-GVLVRPSG-------TKIILSPPLVI 427 (449)
T ss_pred HHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhC-CeEEEecC-------CEEEEECCCCC
Confidence 77664 32111112466666666311 1 12344455554 99997632 248888 556
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
|++|+++++++|+++|
T Consensus 428 t~~eid~~~~~l~~~l 443 (449)
T PRK07481 428 QREDVDRIVDALDAGL 443 (449)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 297
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.49 E-value=1.3e-12 Score=115.34 Aligned_cols=203 Identities=17% Similarity=0.206 Sum_probs=128.0
Q ss_pred CceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-......|.+.+ ++.+++|.++|++||+++|+||++.++ ..+.......+...+| +.+++|.+| .|
T Consensus 246 ~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PD----i~t~gK~lg-gG 319 (474)
T PLN02482 246 EIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPD----LTTLGKVIG-GG 319 (474)
T ss_pred ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCC----EEEecchhh-CC
Confidence 4555555544666776655 678999999999999999999999876 3332222222233344 237899998 88
Q ss_pred cceeEEEecccccccCCcchHHHHH---hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFN---RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 199 (272)
+.+|.++++++. .+.+. ......+++.++++..|+.+.++.... +...++++++.++|++.|.++
T Consensus 320 ~Pigav~g~~ei--------~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~ 388 (474)
T PLN02482 320 LPVGAYGGRREI--------MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAG 388 (474)
T ss_pred CceEEEEEcHHH--------HHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH
Confidence 999999888877 34432 122334444677887777777763222 346667777777777777664
Q ss_pred ---CCeEe-cCCCceEEEeecC--C---------CC---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHH
Q 036024 200 ---GIKVY-GGINAPYVWAHFP--G---------RK---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESI 261 (272)
Q Consensus 200 ---g~~~~-~~~~~~~~~i~l~--~---------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i 261 (272)
|..+. ....+++ .+.+. . .+ ...+...++++ ||++.|.. +. .+ + +++..|++|+
T Consensus 389 ~~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~~~~~~-~~---~~-~-psl~ht~~dI 460 (474)
T PLN02482 389 KKAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGMLEE-GVYLAPSQ-FE---AG-F-TSLAHTEEDI 460 (474)
T ss_pred HhcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHHHHC-CeEEeccC-CC---CC-c-CCCCCCHHHH
Confidence 44443 2223433 23221 0 01 12455556655 99997632 11 11 1 5667799999
Q ss_pred HHHHHHHHHhC
Q 036024 262 LEASRRLEALF 272 (272)
Q Consensus 262 ~~~l~~l~~~l 272 (272)
+++++++++++
T Consensus 461 d~~l~al~~~l 471 (474)
T PLN02482 461 DFTIAAAERVL 471 (474)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 298
>PLN02452 phosphoserine transaminase
Probab=99.49 E-value=3.2e-12 Score=109.19 Aligned_cols=241 Identities=12% Similarity=0.133 Sum_probs=158.2
Q ss_pred ccccCccc-chHHhcccc-eeEEeecCCCCCc--ccC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 7 VIVGQAGD-LEDEVGKYC-NIEYLECGPGNNF--FPD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 7 ~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~--~~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
+..+.|+. +...++++| ..+... .+..++ .++ ++..++++.+.+++.+..||+.+. +++++. ++
T Consensus 101 ~~~G~fg~r~~~~a~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~hnETstGv~~~--~~~~i~------~~ 171 (365)
T PLN02452 101 VVTGSWSKKAAKEAKKYCKTNVIAS-GKDEKYTKIPSVSEWELTPDAKFVHICANETIHGVEFK--DYPDVG------NV 171 (365)
T ss_pred EECCHHHHHHHHHHHHhCCCcEEEe-cCCCCCCCCCChHHcCCCCCCcEEEECCCCCCCcEecC--cccccC------CC
Confidence 34456666 777888888 333332 222222 233 333467899999999999999643 244443 38
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcch--HHHHHhhh--hhcc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV--INDFNRII--CTCF 155 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~ 155 (272)
++|+|.+... ++.+..+..+. +...|..|.+|.+| +|.++++++.+....... .-++.... ....
T Consensus 172 ~lvVDa~Ss~---g~~pidv~~~~------v~~~saqK~lGP~G--l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~ 240 (365)
T PLN02452 172 PLVADMSSNF---LSKPVDVSKYG------VIYAGAQKNVGPSG--VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLY 240 (365)
T ss_pred eEEEECCccc---cCcccCHHHcC------EEEEecccccCCCC--eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCcc
Confidence 9999999875 23234444442 34468999999888 788999888864321110 11111111 2233
Q ss_pred CCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeEe--cC--CCceEEEeecCCCChHHHHHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASL-GIKVY--GG--INAPYVWAHFPGRKSWDVFAEIL 229 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~--~~~~~~~i~l~~~~~~~~~~~ll 229 (272)
.+++....+++.++++....+ .++.+.++.+++++++++.|++. |+... .+ ...+.+.+.+++....+.+.+.+
T Consensus 241 ~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~ 320 (365)
T PLN02452 241 NTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEA 320 (365)
T ss_pred CChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCchhHHHHHHHH
Confidence 568888888888888744433 57999999999999999999985 76211 11 24567778887644555566666
Q ss_pred HhcCeEeeCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 230 EKTHITTVPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
++.|+...+|+.- -+.+|+|+++ +.++++.+++.++++
T Consensus 321 ~~~g~~~~~G~r~----~gg~R~s~yna~~~~~v~~L~~~m~~f 360 (365)
T PLN02452 321 AKAGMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDF 360 (365)
T ss_pred HHCCCcccCCccc----cCceEEECcCCCCHHHHHHHHHHHHHH
Confidence 7779999998743 2349999755 889999999988764
No 299
>PRK07036 hypothetical protein; Provisional
Probab=99.49 E-value=3.9e-12 Score=112.46 Aligned_cols=205 Identities=14% Similarity=0.059 Sum_probs=132.6
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCcc-ccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIY-EIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.++++-..+...|.. .+++.+++|.++|++||+++|.||++.++...+...... .+...+|. -+++|.+|
T Consensus 219 ~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDi----vt~gK~l~- 293 (466)
T PRK07036 219 DNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDI----ITFAKGLT- 293 (466)
T ss_pred CceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCE----EEEccccc-
Confidence 456666666556666775 467779999999999999999999998764444322222 22334452 25799998
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI 193 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 193 (272)
.| +.+|.++++++. .+.+.. +...++++.++++..++.+.++.... +...++.+++.++|+
T Consensus 294 gG~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~---~~l~~~~~~~g~~l~ 362 (466)
T PRK07036 294 SGYQPLGAVIISERL--------LDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER---EGLCEHVREVGPYFE 362 (466)
T ss_pred cCccccEEEEEcHHH--------HHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHH
Confidence 78 489999998887 333321 22334556788888888888863322 345566777777777
Q ss_pred HHHHhC---CCeEecCCCceEEEeecCCC--------C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024 194 DTLASL---GIKVYGGINAPYVWAHFPGR--------K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG 256 (272)
Q Consensus 194 ~~L~~~---g~~~~~~~~~~~~~i~l~~~--------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~ 256 (272)
+.|+++ ++...-...|.++.+++... . ...+...++++ ||.+.+.. +.+|++ +..
T Consensus 363 ~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~-------~~~~l~Ppl~i 434 (466)
T PRK07036 363 ERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQER-GLLVRPLE-------HLCVLSPPLII 434 (466)
T ss_pred HHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHC-CcEEeecC-------CEEEEeCCCcC
Confidence 777654 22111112466677777311 0 12344455554 99987531 467888 556
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
|++|+++++++|+++|
T Consensus 435 t~~~id~~~~~l~~al 450 (466)
T PRK07036 435 TRAQIDEIVAILRAAI 450 (466)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 300
>PRK06917 hypothetical protein; Provisional
Probab=99.48 E-value=4.8e-12 Score=111.40 Aligned_cols=211 Identities=13% Similarity=0.082 Sum_probs=132.9
Q ss_pred CceEEEEecCCC-cccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSPNN-PTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p~n-ptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++.++++--.+. ..|. ..+++.+++|.++|+++|+++|.||++.++...+.......+...+|. -+++|.+| .
T Consensus 199 ~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi----~~~gK~l~-~ 273 (447)
T PRK06917 199 HIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI----MTLGKGLG-A 273 (447)
T ss_pred ceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE----EEeeehhc-c
Confidence 456666653343 3344 557888999999999999999999999876434432222233334452 36799998 7
Q ss_pred cc-ceeEEEecccccccCCcchHHHHHh----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024 123 GV-RLGWTVVPEELLFSSGFPVINDFNR----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 123 g~-r~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
|. .+|.++++++. .+.+.. ....++++.++++..++.+.++.... +...++.+++.++|++.|+
T Consensus 274 G~~Pi~a~~~~~~i--------~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~ 342 (447)
T PRK06917 274 GYTPIAATVVSDRV--------MEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK---HNLPEKAAEKGEYLIKGLQ 342 (447)
T ss_pred CCcceEEEEEcHHH--------HHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHH
Confidence 85 89999998877 333322 12234555788888888888863222 3455677777777777776
Q ss_pred hC----CCeEecCCCceEEEeecCC--------CC----hHHHHHHHHHhcCeEeeCCCC-CCCCCCCeEEEE--ccCCH
Q 036024 198 SL----GIKVYGGINAPYVWAHFPG--------RK----SWDVFAEILEKTHITTVPGSG-FGPGGEEYIRIS--GFGHR 258 (272)
Q Consensus 198 ~~----g~~~~~~~~~~~~~i~l~~--------~~----~~~~~~~ll~~~gi~v~~g~~-~~~~~~~~~R~s--~~~~~ 258 (272)
++ ++...-...|.++.+.+.. .. ...+...++++ ||.+.+... ......+.+|++ +..|+
T Consensus 343 ~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~ 421 (447)
T PRK06917 343 KVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKN-GLLLYPAVAGQDGKEGDAVIIAPPMTITY 421 (447)
T ss_pred HHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhC-CcEEEecccccCCCCCCEEEEECCCcCCH
Confidence 64 3211111245666666621 01 22344455554 999976421 111124678998 45799
Q ss_pred HHHHHHHHHHHHhC
Q 036024 259 ESILEASRRLEALF 272 (272)
Q Consensus 259 ~~i~~~l~~l~~~l 272 (272)
+|+++++++|+++|
T Consensus 422 ~eid~~~~~l~~~l 435 (447)
T PRK06917 422 SELDELLSIFAKSV 435 (447)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 301
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=3.3e-12 Score=112.05 Aligned_cols=202 Identities=16% Similarity=0.184 Sum_probs=128.7
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-..++..|.+. +++.+++|.++|+++|+++|.||++.++- .+...........+|. -+++|.+| .|
T Consensus 200 ~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~R-t~~~~a~~~~gv~PDi----vt~gK~lg-gG 273 (428)
T PRK12389 200 EVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR-FMYGGAQDLLGVEPDL----TALGKIIG-GG 273 (428)
T ss_pred cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCcchhhHHhCCCCCe----eeechhhc-CC
Confidence 455555555576778655 57779999999999999999999998762 2211111122333442 37899998 88
Q ss_pred cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-- 198 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-- 198 (272)
+.+|.++++++. .+.+.. ....++++.++++..|+.+.++.... +...++.+++.+++++.|++
T Consensus 274 ~Pi~av~~~~~i--------~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~ 342 (428)
T PRK12389 274 LPIGAYGGRKDI--------MEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ---EGVYEKLDRLGAMLEEGILEAA 342 (428)
T ss_pred CceeEEeEHHHH--------HhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHH
Confidence 999999888877 333321 22334555788888888888873322 23556677777777777765
Q ss_pred --CCC--eEecCCCceEEEeecCC--C---------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHH
Q 036024 199 --LGI--KVYGGINAPYVWAHFPG--R---------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRES 260 (272)
Q Consensus 199 --~g~--~~~~~~~~~~~~i~l~~--~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~ 260 (272)
.++ .+... .|++ -+.+.. . + ...+...+++ +||.+.+.. .+.+.+++..+++|
T Consensus 343 ~~~~~~~~v~r~-~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~~~~~l~~t~e~ 413 (428)
T PRK12389 343 EKHGITITINRL-KGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLMLN-QGINLAPSK------YEAWFLTTAHTEED 413 (428)
T ss_pred HhCCCCEEEEec-CcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHHH-CCcEeecCC------CCCeeecCCCCHHH
Confidence 343 33332 3433 344421 0 1 1234444544 599997742 22356777789999
Q ss_pred HHHHHHHHHHhC
Q 036024 261 ILEASRRLEALF 272 (272)
Q Consensus 261 i~~~l~~l~~~l 272 (272)
++++++++++++
T Consensus 414 id~~~~~l~~~l 425 (428)
T PRK12389 414 IEETLEAVDRAF 425 (428)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 302
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=7.2e-12 Score=110.73 Aligned_cols=204 Identities=12% Similarity=0.068 Sum_probs=129.0
Q ss_pred CCceEEEEec-CCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCS-PNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.++++-- .++-.|. ..+++.++++.++|+++|+++|.||++.++...+...........+|.+ +++|.+|
T Consensus 235 ~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv----~~gKgl~- 309 (472)
T PRK08742 235 GEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLL----CLSKGLT- 309 (472)
T ss_pred CceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEE----EEccccc-
Confidence 4555555553 2666676 4577889999999999999999999999876555433333333345533 4699998
Q ss_pred Ccc-ceeEEEecccccccCCcchHHHHH------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TGV-RLGWTVVPEELLFSSGFPVINDFN------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 122 ~g~-r~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
.|. .+|.++++++. .+.+. .....++++.++++..|+.+.++.... +...++.++..+++++
T Consensus 310 gG~~Plaav~~~~ei--------~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~---~~l~~~~~~~g~~l~~ 378 (472)
T PRK08742 310 GGFLPLSAVLATQQL--------YDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD---DDVIARNQPTAARMTQ 378 (472)
T ss_pred CCCCCcceeeccHHH--------HHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHH
Confidence 784 89999998887 33332 112344555788888888888873222 2233444444444444
Q ss_pred HHHh---CCC-eEecCCCceEEEeecCC-CC-------h----HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024 195 TLAS---LGI-KVYGGINAPYVWAHFPG-RK-------S----WDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG 256 (272)
Q Consensus 195 ~L~~---~g~-~~~~~~~~~~~~i~l~~-~~-------~----~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~ 256 (272)
.++. +++ .-.. ..|.++-+++.. .. . ..+...++++ ||.+.+. + +.+||. +..
T Consensus 379 ~~~~~~~~~~i~dvR-G~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~------g-~vi~~~PpL~i 449 (472)
T PRK08742 379 LAAQIGEHPHVADVR-QAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALAR-GVVLRPL------G-DVLYWMPPYCV 449 (472)
T ss_pred HHHHHhcCCCeeeEe-ccceEEEEEeccCccccccCCchhHHHHHHHHHHHHC-CeEEEec------C-CEEEEECCCCC
Confidence 4433 332 1122 246677777631 10 1 2344455554 9999752 1 479998 566
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
+++|+++++++|+++|
T Consensus 450 t~~ei~~~~~~l~~~l 465 (472)
T PRK08742 450 DEAQLALLADTTRHAI 465 (472)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 303
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.47 E-value=9.7e-12 Score=108.89 Aligned_cols=115 Identities=24% Similarity=0.346 Sum_probs=78.0
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+...| +++.++.+....+.--+ .+++++|++++|+||||.+++ +++|+++|+++
T Consensus 103 d~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai--~~~tklV~vesp~NptG~v~d---l~~I~~la~~~ 177 (427)
T PRK05994 103 DEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAI--TPRTKAIFIESIANPGGTVTD---IAAIAEVAHRA 177 (427)
T ss_pred CEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc
Confidence 45565554433 233456678 88888764211111112 267999999999999999987 88999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV 131 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~ 131 (272)
++++|+|+++.... . ..++ .+. .| +++.|++|.+|.+|-.+|.+++
T Consensus 178 gi~livD~a~a~~~-~--~~pl-~~g--aD--ivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 178 GLPLIVDNTLASPY-L--IRPI-EHG--AD--IVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred CCEEEEECCccccc-c--CCcc-ccC--Cc--EEEEcCccccCCCCCcEEEEEE
Confidence 99999999997421 1 1122 221 22 8899999999866666676565
No 304
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.47 E-value=1.7e-11 Score=106.82 Aligned_cols=176 Identities=16% Similarity=0.157 Sum_probs=104.6
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. +...+...| ++..+....+ ++ +++ .+++|+|++.+|+||++.+.+ +++|+++|
T Consensus 101 D~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d----~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA 173 (432)
T PRK06702 101 DHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLT----ADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAA 173 (432)
T ss_pred CEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCC----HHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHH
Confidence 56666665443 122357788 8888865311 11 222 378999999999999999987 99999999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcc-----ccCCCccce-----eEEEecccccccCC----
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSK-----FSGFTGVRL-----GWTVVPEELLFSSG---- 140 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-----~~g~~g~r~-----G~~~~~~~~~~~~~---- 140 (272)
+++|+++|+|+++.. +....+..... -|++.|+|| ..+++|.++ +|...+...+.+.-
T Consensus 174 ~~~gi~livD~T~~t----P~~~~pl~~GA----DIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~ 245 (432)
T PRK06702 174 KELEVPFIVDNTLAT----PYLCQAFEHGA----NIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYH 245 (432)
T ss_pred HHcCCEEEEECCCCc----hhhCChhhcCC----CEEEEccccccCCCcceeceEEEeCCCccccccccccccccccccc
Confidence 999999999999852 10011112211 299999999 555555554 44443222211100
Q ss_pred ----------cchHH-HHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 141 ----------FPVIN-DFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 141 ----------~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
..+.. .............++.....+...++ .++.+.++.++++..+.+.|+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~-----Tl~lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 246 GVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLE-----TLHLRMERHSENALAVAKWLADH 310 (432)
T ss_pred ccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccC-----cHHHHHHHHHHHHHHHHHHHHhC
Confidence 00000 11111122223355554444444443 34566677789999999999987
No 305
>PRK06062 hypothetical protein; Provisional
Probab=99.47 E-value=6.7e-12 Score=110.60 Aligned_cols=203 Identities=17% Similarity=0.147 Sum_probs=128.3
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.+|++-..+...|... +++.+++|.++|+++|+++|+||++.++...+...........+| +-+++|.+| .
T Consensus 213 ~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD----i~t~gK~lg-g 287 (451)
T PRK06062 213 STIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD----LITFAKGVN-S 287 (451)
T ss_pred CceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC----eeeechhhh-c
Confidence 3455666654465567664 677799999999999999999999997643332212222333445 336899998 7
Q ss_pred cc-ceeEEEecccccccCCcchHHHHHh--hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHH-HHHHHHHHh
Q 036024 123 GV-RLGWTVVPEELLFSSGFPVINDFNR--IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENT-KILIDTLAS 198 (272)
Q Consensus 123 g~-r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~-~~l~~~L~~ 198 (272)
|. .+|.++++++. .+.+.. +...++++.++++..++.+.++.... +...++.+++. +++++.|++
T Consensus 288 G~~Pigav~~~~~i--------~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~G~~~l~~~L~~ 356 (451)
T PRK06062 288 GYVPLGGVAISEAI--------AATFADRPYPGGLTYSGHPLACAAAVATINAMEE---EGIVENAARIGAEVLGPGLRE 356 (451)
T ss_pred CCcCcEEEEEcHHH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 84 89999998877 444432 12334556778888888888863322 23445555554 456666655
Q ss_pred C----CC--eEecCCCceEEEeecCCC---------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--c
Q 036024 199 L----GI--KVYGGINAPYVWAHFPGR---------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--F 255 (272)
Q Consensus 199 ~----g~--~~~~~~~~~~~~i~l~~~---------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~ 255 (272)
+ +. .+.+ .|.++.+.+... ....+...+++ +||.+.+. .+.+|++. .
T Consensus 357 l~~~~~~v~~vrG--~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gvl~~~~-------~~~lrl~ppl~ 426 (451)
T PRK06062 357 LAERHPSVGEVRG--LGVFWALELVADRETREPLAPYGASSAAMAAVKAACKE-RGLLPFVN-------GNRIHVVPPCT 426 (451)
T ss_pred HHhcCCcEEeEec--cccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHH-CCcEEeec-------CCEEEEECCcc
Confidence 3 32 2222 355555665310 02245555554 49998642 24689984 6
Q ss_pred CCHHHHHHHHHHHHHhC
Q 036024 256 GHRESILEASRRLEALF 272 (272)
Q Consensus 256 ~~~~~i~~~l~~l~~~l 272 (272)
.+++|+++++++|+++|
T Consensus 427 ~t~~eid~~~~~l~~~l 443 (451)
T PRK06062 427 VTEDEVREGLAILDAAL 443 (451)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 69999999999998764
No 306
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=7.3e-12 Score=110.67 Aligned_cols=204 Identities=13% Similarity=0.074 Sum_probs=133.9
Q ss_pred CCceEEEEec-CCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCS-PNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.++++-- .+...|. ..+++.+++|.++|+++|+++|.||++.++...+.......+...+|.+ +++|.+|
T Consensus 213 ~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv----~~gKgl~- 287 (466)
T PRK07030 213 DEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL----CLSKALT- 287 (466)
T ss_pred CceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE----eeehhcc-
Confidence 4555666554 2555666 4566779999999999999999999998775444332223333345533 4699998
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHH-------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFN-------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI 193 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 193 (272)
.| +.+|.++++++. .+.+. ......+++.++++..|+.+.++.... +...++.+++-++++
T Consensus 288 gG~~Pi~av~~~~ei--------~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~---~~l~~~~~~~G~~l~ 356 (466)
T PRK07030 288 GGYLPLAAVLTTDTV--------YQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ---DNVIENNRALARRMA 356 (466)
T ss_pred CCcccceEEEecHHH--------HHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHH
Confidence 88 489999998887 33332 123445556788888888888873322 345566677777777
Q ss_pred HHHHhC---C-CeEecCCCceEEEeecCC-CC-----------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--cc
Q 036024 194 DTLASL---G-IKVYGGINAPYVWAHFPG-RK-----------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GF 255 (272)
Q Consensus 194 ~~L~~~---g-~~~~~~~~~~~~~i~l~~-~~-----------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~ 255 (272)
+.|+++ . +.-.. ..|.++.+++.. .. ...+..+++++ |+.+.+. ...+|+. +.
T Consensus 357 ~~L~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~-------g~~i~~~Ppl~ 427 (466)
T PRK07030 357 EATAHLADHPHVAEVR-QTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALER-GALLRPL-------GSVVYFLPPYV 427 (466)
T ss_pred HHHHHHhcCCCEEEeE-eceeEEEEEeccCccccccCcchhHHHHHHHHHHHHC-CeEEEec-------CCEEEEECCcc
Confidence 777664 2 11122 246667777631 10 12344555555 9999652 1468887 46
Q ss_pred CCHHHHHHHHHHHHHhC
Q 036024 256 GHRESILEASRRLEALF 272 (272)
Q Consensus 256 ~~~~~i~~~l~~l~~~l 272 (272)
.+++|+++++++|+++|
T Consensus 428 it~~eid~~~~~l~~al 444 (466)
T PRK07030 428 ITPEQIDFLAEVASEGI 444 (466)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 69999999999998864
No 307
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.46 E-value=1.5e-11 Score=106.61 Aligned_cols=242 Identities=14% Similarity=0.058 Sum_probs=141.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----C----CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----T----SRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++.++.+. +...+...| +++.++++++ .+.+|++. . +++++|+++ |++|...+ +++|.+
T Consensus 70 d~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~---~~~i~~ 142 (380)
T TIGR03588 70 DRVWTTPITFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVD---MQAIAA 142 (380)
T ss_pred CEEEeCCcchHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCC---HHHHHH
Confidence 56777766544 666677788 9999999765 45555332 1 467888865 46888765 899999
Q ss_pred HHHHcCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024 73 FARNNGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
+|+++++++|+|++|+... +.+. .+... ...| +.+.|++ |.++.+ ..|+++.+++.+ .+.+..
T Consensus 143 l~~~~~~~lI~D~a~a~g~~~~~~--~~g~~-~~~d--~~~~S~~~~K~~~~~--~GG~v~~~~~~~-------~~~~~~ 208 (380)
T TIGR03588 143 LAKKHGLKIIEDASHALGAEYGGK--PVGNC-RYAD--ATVFSFHPVKIITTA--EGGAVTTNDEEL-------AERMRL 208 (380)
T ss_pred HHHHcCCEEEEECCCcccCccCCE--eCCCc-cccc--eEEEecCCCCccccc--CceEEEECCHHH-------HHHHHH
Confidence 9999999999999998642 2321 12110 0123 6666665 888633 357777765542 333322
Q ss_pred hhhhcc-------------------------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE
Q 036024 150 IICTCF-------------------------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKV 203 (272)
Q Consensus 150 ~~~~~~-------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 203 (272)
...... ...+.+ .++....+ ...+++..++-+++.+++.+.|+++ ++..
T Consensus 209 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l--~aa~g~~q---L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~ 283 (380)
T TIGR03588 209 LRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDI--QAALGLSQ---LKKLDRFVAKRREIAARYDRLLKDLPYFTP 283 (380)
T ss_pred HHHCCCCCCcccccccccCcceeeeeccccccCccHH--HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCccC
Confidence 211110 001111 11111111 2335677788888889999999887 4443
Q ss_pred ecCC-C---ceE-EEeecC---CCChHHHHHHHHHhcCeEeeCCCCCC-------C--C-C---------CCeEEEEcc-
Q 036024 204 YGGI-N---APY-VWAHFP---GRKSWDVFAEILEKTHITTVPGSGFG-------P--G-G---------EEYIRISGF- 255 (272)
Q Consensus 204 ~~~~-~---~~~-~~i~l~---~~~~~~~~~~ll~~~gi~v~~g~~~~-------~--~-~---------~~~~R~s~~- 255 (272)
..+. . .++ ..+.++ +....++...| ++.||.+......- . . . ...+++.+.
T Consensus 284 ~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~ 362 (380)
T TIGR03588 284 LTIPLGSKSAWHLYPILLDQEFGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHP 362 (380)
T ss_pred CCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCC
Confidence 3321 1 222 222333 23455666655 55699886432110 0 0 0 255777753
Q ss_pred -CCHHHHHHHHHHHHHhC
Q 036024 256 -GHRESILEASRRLEALF 272 (272)
Q Consensus 256 -~~~~~i~~~l~~l~~~l 272 (272)
.+++|++..++.|+++|
T Consensus 363 ~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 363 ALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 48999999999999875
No 308
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=6.3e-12 Score=111.02 Aligned_cols=203 Identities=15% Similarity=0.083 Sum_probs=133.4
Q ss_pred CCceEEEEec-CCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCS-PNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.++++-- .+...|.. .+++.+++|.++|+++|+++|.||++.++...+...........+|.+ +++|.+|
T Consensus 222 ~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv----~~gK~l~- 296 (460)
T PRK06916 222 EEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM----TAGKGLT- 296 (460)
T ss_pred CcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee----eeehhhh-
Confidence 4566666654 36666765 588889999999999999999999998764444332222333345532 5799998
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHH-------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFN-------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI 193 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 193 (272)
.| +.+|.++++++. .+.+. ......+++.++++..++.+.++.... +...++.+++.++++
T Consensus 297 gG~~Pi~av~~~~ei--------~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~ 365 (460)
T PRK06916 297 GGYLPIAITVTTDEI--------YNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK---TNLIEQVARKTEYVA 365 (460)
T ss_pred cCccccceeeecHHH--------HHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHH
Confidence 78 589999999887 33332 122334555788888888888763222 345567777777888
Q ss_pred HHHHhC---C-C-eEecCCCceEEEeecCCC--------C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--c
Q 036024 194 DTLASL---G-I-KVYGGINAPYVWAHFPGR--------K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--G 254 (272)
Q Consensus 194 ~~L~~~---g-~-~~~~~~~~~~~~i~l~~~--------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~ 254 (272)
+.|+++ . + .+.+ .|.++-+.+... . ...+...++++ ||.+.+.. +.+|+. +
T Consensus 366 ~~l~~l~~~~~v~~vrG--~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g-------~~l~~~Ppl 435 (460)
T PRK06916 366 TQLEDLFALKHVGDIRQ--LGLMVGIELVKNKETKEPFEWTERVGVQVCKRSREL-GMLTRPLG-------NTIVFMPPL 435 (460)
T ss_pred HHHHHhhcCCCeEEeec--CCceeeEEeecccccccCCCchhhHHHHHHHHHHHC-CeEEEecC-------CEEEEeCCc
Confidence 888765 2 1 1222 355555655311 0 12445555554 99997631 468877 5
Q ss_pred cCCHHHHHHHHHHHHHhC
Q 036024 255 FGHRESILEASRRLEALF 272 (272)
Q Consensus 255 ~~~~~~i~~~l~~l~~~l 272 (272)
..+++|+++++++|+++|
T Consensus 436 ~it~~~id~~~~~l~~~l 453 (460)
T PRK06916 436 ASTIDELDEMLRILYKAI 453 (460)
T ss_pred ccCHHHHHHHHHHHHHHH
Confidence 669999999999998764
No 309
>PRK02769 histidine decarboxylase; Provisional
Probab=99.45 E-value=1.3e-11 Score=106.25 Aligned_cols=234 Identities=15% Similarity=0.084 Sum_probs=149.5
Q ss_pred chHHhcccc-eeEEeecCCCCCcccC-CCC-C-C---CceEEEEecCCCccccCCCHHHHHHHHHHHHHcC---CEEEEc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T-S---RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG---SIIIFD 84 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~-~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~---~~vi~D 84 (272)
....++.+| +.+.++.++++...++ +++ + + ++.+|+++.++|+||.+-| +++|+++|+++| +++++|
T Consensus 123 v~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVD 199 (380)
T PRK02769 123 VSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHAD 199 (380)
T ss_pred HHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEE
Confidence 445666778 7778888754333333 222 1 3 3888999999999999976 888999999998 699999
Q ss_pred ccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH
Q 036024 85 SAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ 163 (272)
Q Consensus 85 ~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (272)
.+++.+..... ..+..... .+...+..|.+|.+|.| ..+|.++.+++.+..... -.+.+.....+...+-+....
T Consensus 200 aA~gg~~~p~~~~~~~~d~~--~~vDsis~s~HK~~~~P-~g~G~l~~r~~~~~~~~~-~~~yl~~~d~t~~GSR~g~~~ 275 (380)
T PRK02769 200 AALSGMILPFVNNPPPFSFA--DGIDSIAISGHKFIGSP-MPCGIVLAKKKYVERISV-DVDYIGSRDQTISGSRNGHTA 275 (380)
T ss_pred ecccceeecccCccccCCcc--CCCCEEEECCcccCCCC-CCcEEEEEehhhhhhccc-CccccCCCCCCccCCCCcHHH
Confidence 99987544311 11111111 12236777999988733 448998888766322110 011111111111222334445
Q ss_pred HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCC
Q 036024 164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG 243 (272)
Q Consensus 164 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~ 243 (272)
.++...+...+....++..++..+.++++.+.|++.|+++......+.+.+..+. .++ . + |..+.+.
T Consensus 276 l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~---~~~----~-~-~w~l~~~---- 342 (380)
T PRK02769 276 LLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS---ERI----W-K-KWHLATS---- 342 (380)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC---HHH----H-h-CeeEccc----
Confidence 5566666655667779999999999999999999999998776667777666553 122 2 3 5555432
Q ss_pred CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 244 PGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 244 ~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
...+|+.+ ..+++.++++++.|...
T Consensus 343 ---~~~~hi~~~~~~~~~~~~~f~~dl~~~ 369 (380)
T PRK02769 343 ---GNQAHIITMPHHNKQQIDSLIDELIFD 369 (380)
T ss_pred ---CCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 23788886 34888899999888754
No 310
>PRK07483 hypothetical protein; Provisional
Probab=99.45 E-value=1.4e-11 Score=108.32 Aligned_cols=211 Identities=12% Similarity=0.075 Sum_probs=133.4
Q ss_pred CCceEEEEecCCC-ccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSPNN-PTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p~n-ptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++.+|++-..+. -.| ...+++.+++|.++|++||+++|.||++.++...+...........+|.+ +++|.+|
T Consensus 198 ~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gK~l~- 272 (443)
T PRK07483 198 DTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLV----TIAKGLG- 272 (443)
T ss_pred CceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCee----eehhhhc-
Confidence 3555666654343 234 45677889999999999999999999998775444322222333345533 5799998
Q ss_pred Ccc-ceeEEEecccccccCCcchHHHHHh----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TGV-RLGWTVVPEELLFSSGFPVINDFNR----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196 (272)
Q Consensus 122 ~g~-r~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 196 (272)
.|. .+|.++++++. .+.+.. +...++++.++++..++.+.++.... +...++.+++.++|++.|
T Consensus 273 gG~~Pi~av~~~~~i--------~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~L 341 (443)
T PRK07483 273 AGYQPIGAVLASDRI--------YDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE---DGLLANVRARGEQLRARL 341 (443)
T ss_pred cCccccEEEEEcHHH--------HHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHH
Confidence 885 89999998887 343421 12334556788888888888863322 345566666667777776
Q ss_pred HhC----CC-eEecCCCceEEEeecCCC-------C-----hHHHHHHHHHhcCeEeeCCCCC-CCCCCCeEEEE--ccC
Q 036024 197 ASL----GI-KVYGGINAPYVWAHFPGR-------K-----SWDVFAEILEKTHITTVPGSGF-GPGGEEYIRIS--GFG 256 (272)
Q Consensus 197 ~~~----g~-~~~~~~~~~~~~i~l~~~-------~-----~~~~~~~ll~~~gi~v~~g~~~-~~~~~~~~R~s--~~~ 256 (272)
+++ +. .-.. ..|.++-+++... + ...+...++++ |+.+.+.... .....+.+||. +..
T Consensus 342 ~~l~~~~~~i~~vR-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~~~~~~~~~~~~l~~~PpL~i 419 (443)
T PRK07483 342 RERLGQHPHVGDIR-GRGLFVGVELVADRATKAPFDPALKLHARIKREAMAR-GLMVYPMGGTIDGVRGDHVLLAPPFII 419 (443)
T ss_pred HHHHhcCCCeeeEe-ecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC-CcEEEecCccccCCCCCEEEEECCCCC
Confidence 543 31 1122 2455666666311 1 12345555555 9999764211 00113579998 567
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
+++|+++++++|+++|
T Consensus 420 t~~eid~~~~~l~~~l 435 (443)
T PRK07483 420 TAAQIDEIVERLGDAI 435 (443)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 311
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.45 E-value=8.1e-12 Score=110.26 Aligned_cols=206 Identities=16% Similarity=0.117 Sum_probs=128.9
Q ss_pred CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-..+.-.|.. .+++.++++.++|++||+++|.||+..++...+...........+|.+ +++|.+| .|
T Consensus 225 ~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDiv----t~gK~l~-gG 299 (459)
T PRK06931 225 KPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDII----VMSKAVG-GG 299 (459)
T ss_pred ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEE----Eeccccc-CC
Confidence 45566664345555664 567889999999999999999999999875444322222333345532 5799998 78
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 199 (272)
+.+|.++.+++. +.+.......+++.++++..++.+.++.... +...++.+++.++|++.|+++
T Consensus 300 ~Pi~av~~~~~~---------~~~~~~~~~~T~~gnpla~aaala~L~~l~~---~~l~~~~~~~G~~l~~~L~~l~~~~ 367 (459)
T PRK06931 300 LPLAVLGIKKEF---------DAWQPGGHTGTFRGNQLAMATGLTTLKILKE---ENLAQNAAERGEWLKAQLAELQKRY 367 (459)
T ss_pred cceeeeeeHHHH---------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999987776543 1121223445556888888888888873222 234455566666666666553
Q ss_pred CCeEecCCCceEEEeecCCC------------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHH
Q 036024 200 GIKVYGGINAPYVWAHFPGR------------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESIL 262 (272)
Q Consensus 200 g~~~~~~~~~~~~~i~l~~~------------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~ 262 (272)
++...--..|.++.+++... + ...+...+++ .|+.+.++... .+.+|+. +..+++|++
T Consensus 368 ~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~----~~~l~~~Ppl~it~~eid 442 (459)
T PRK06931 368 PCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFE-NGLLLERGGRN----GNVVRLLPPLLITQAECE 442 (459)
T ss_pred CCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHH-CCcEEeecCCC----CCEEEEECCCCcCHHHHH
Confidence 32111112466666666311 0 1234444554 49999764321 3568877 456999999
Q ss_pred HHHHHHHHhC
Q 036024 263 EASRRLEALF 272 (272)
Q Consensus 263 ~~l~~l~~~l 272 (272)
+++++|+++|
T Consensus 443 ~~~~~l~~~l 452 (459)
T PRK06931 443 EFIDRFEQAL 452 (459)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 312
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.44 E-value=4.4e-12 Score=111.38 Aligned_cols=202 Identities=9% Similarity=0.007 Sum_probs=126.6
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC--CCceEEEecCccccC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA--REVAIEISSFSKFSG 120 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g 120 (272)
+++.++++-..+...|... +++.+++|.++|++||+++|+||++.++...+........+.. +|. .+++|.+|
T Consensus 250 ~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi----~t~gK~lg 325 (464)
T TIGR00699 250 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDM----VTFSKKFQ 325 (464)
T ss_pred CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCE----EEehhhhc
Confidence 3566666665576778776 6788999999999999999999999876543322122222211 442 46899996
Q ss_pred CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG 200 (272)
Q Consensus 121 ~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 200 (272)
.| |+++..+ .+ .........++++.++++..++.+.++.... +...++.+++.++|++.|+++.
T Consensus 326 -~g---G~~~~~~-~~--------~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~ 389 (464)
T TIGR00699 326 -TA---GYFFHDP-AF--------RPNKPYRQFNTWMGDPSRALILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQ 389 (464)
T ss_pred -cC---Cccccch-hc--------cCCCCcccccCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence 32 4433332 21 1111222344555777877777777763222 3455666666677777776541
Q ss_pred --Ce-----EecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHH
Q 036024 201 --IK-----VYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEA 270 (272)
Q Consensus 201 --~~-----~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~ 270 (272)
.. +.+...|.++-++++... ...+...++++ |+.+.+. +.+.+||. +..+++|+++++++|++
T Consensus 390 ~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~-Gvl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~ 462 (464)
T TIGR00699 390 KKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNN-GVNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISK 462 (464)
T ss_pred HhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHC-CcEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 22 222135777778876322 34455555555 9999653 24679998 46699999999999998
Q ss_pred hC
Q 036024 271 LF 272 (272)
Q Consensus 271 ~l 272 (272)
++
T Consensus 463 ~~ 464 (464)
T TIGR00699 463 II 464 (464)
T ss_pred hC
Confidence 75
No 313
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.44 E-value=1.9e-12 Score=109.75 Aligned_cols=227 Identities=17% Similarity=0.205 Sum_probs=142.4
Q ss_pred eeEEeecCCCCCcccCCCCC-CCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC-CCCCCcc
Q 036024 24 NIEYLECGPGNNFFPDLKGT-SRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIY 100 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~-~~~~~~~ 100 (272)
.++.+|.++-..++.-+++. +++.+|++- -..|..=+...++.++.|.++|+++++++|.||+...|... +....+.
T Consensus 178 ~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~ 257 (432)
T COG0001 178 HTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYY 257 (432)
T ss_pred cEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccccc
Confidence 45555555332222223333 577777776 33555333556677999999999999999999999876544 2222222
Q ss_pred ccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHH
Q 036024 101 EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180 (272)
Q Consensus 101 ~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 180 (272)
.+ .+| +.++.|.+| .|+.+|.+.++.+.++. ........+..+.+.++++..|..+.++..... +.
T Consensus 258 gi--~PD----lttlGKiIG-GGlP~ga~gGr~eiM~~-----~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~--~~ 323 (432)
T COG0001 258 GV--EPD----LTTLGKIIG-GGLPIGAFGGRAEIMEQ-----LAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE--EG 323 (432)
T ss_pred Cc--Ccc----hhhhhhhhc-CCcceeeeccHHHHHhh-----hCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc--cc
Confidence 22 334 447999999 99999999999988431 223445556677778888888888888732221 12
Q ss_pred HHHHHHHHHHHHHHHHHh----CCCeEecCC-CceEEEeecC----C-----C----ChHHHHHHHHHhcCeEeeCCCCC
Q 036024 181 VVDYYKENTKILIDTLAS----LGIKVYGGI-NAPYVWAHFP----G-----R----KSWDVFAEILEKTHITTVPGSGF 242 (272)
Q Consensus 181 ~~~~~~~~~~~l~~~L~~----~g~~~~~~~-~~~~~~i~l~----~-----~----~~~~~~~~ll~~~gi~v~~g~~~ 242 (272)
..+++.+..+.|++.|++ .|+.+.... +++|...--+ + . .-..++..++++ ||++.|+. |
T Consensus 324 ~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~-~ 401 (432)
T COG0001 324 VYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQ-F 401 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCcc-c
Confidence 455566666666666655 466554332 3444222211 0 0 123355577777 99998754 2
Q ss_pred CCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 243 GPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 243 ~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+.++ +|...+++++++.+++++++
T Consensus 402 ----ea~f-lS~ahte~di~~~~~a~~~~ 425 (432)
T COG0001 402 ----EAGF-LSTAHTEEDIDRTLEAADEA 425 (432)
T ss_pred ----ccee-eecccCHHHHHHHHHHHHHH
Confidence 2334 77778999999999988765
No 314
>PRK12403 putative aminotransferase; Provisional
Probab=99.43 E-value=3.2e-11 Score=106.55 Aligned_cols=204 Identities=12% Similarity=0.032 Sum_probs=126.8
Q ss_pred CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-..+...|.. .+++.+++|.++|++||+++|.||++.++...+.......+...+| ++ +++|.+| .|
T Consensus 222 ~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PD--iv--~~gK~lg-gG 296 (460)
T PRK12403 222 NVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPD--TL--SIAKGLT-SG 296 (460)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCC--eE--EEccccc-cc
Confidence 44455554446666765 4677799999999999999999999987654443323233333344 22 4899998 78
Q ss_pred c-ceeEEEecccccccCCcchHHHHHh----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHH-HHHHHHHHHHH
Q 036024 124 V-RLGWTVVPEELLFSSGFPVINDFNR----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK-ENTKILIDTLA 197 (272)
Q Consensus 124 ~-r~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~L~ 197 (272)
. .+|.++++++. .+.+.. +...++++.++++..++.+.++.... +...++.+ ++.+++++.|+
T Consensus 297 ~~Piga~v~~~~i--------~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~---~~l~~~~~~~~g~~l~~~L~ 365 (460)
T PRK12403 297 YVPMGGLVLSKRI--------AEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRD---EGVVTRVKDDTGPYLQRCLR 365 (460)
T ss_pred ccceEEEEECHHH--------HHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence 4 89998888776 333321 12334555788888888888873322 22455554 56666666665
Q ss_pred hC----CCeEecCCCceEEEeecCCC------Ch------HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHH
Q 036024 198 SL----GIKVYGGINAPYVWAHFPGR------KS------WDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRE 259 (272)
Q Consensus 198 ~~----g~~~~~~~~~~~~~i~l~~~------~~------~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~ 259 (272)
++ ++...-...|.++.+++... .. ..+...++++ |+.+.+.. +.+|++ +..|++
T Consensus 366 ~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~~-------~~~~l~Ppl~it~~ 437 (460)
T PRK12403 366 EVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEE-GVIIRSTL-------GRMIMAPALVAGRA 437 (460)
T ss_pred HHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhC-CEEEEecC-------CEEEEECCCCCCHH
Confidence 43 32211112466666666311 01 1122333444 99996421 357888 455999
Q ss_pred HHHHHHHHHHHhC
Q 036024 260 SILEASRRLEALF 272 (272)
Q Consensus 260 ~i~~~l~~l~~~l 272 (272)
|++++++.|+++|
T Consensus 438 eid~~~~~l~~al 450 (460)
T PRK12403 438 EIDELVDKTRIAV 450 (460)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998864
No 315
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.43 E-value=1.7e-11 Score=107.84 Aligned_cols=203 Identities=14% Similarity=0.124 Sum_probs=124.0
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++...+...|.. .+++.+++|.++|++||+++|.||++.++...+.......++..+|. + +++|.++ .
T Consensus 224 ~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDi--v--~~gK~l~-~ 298 (443)
T PRK08297 224 HDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDI--V--AFGKKTQ-V 298 (443)
T ss_pred CcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCE--E--Eeccccc-c
Confidence 456666665445555654 67888999999999999999999999876544432222223334453 2 4799885 2
Q ss_pred ccceeEEEecccccccCCcchHH-HHH-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024 123 GVRLGWTVVPEELLFSSGFPVIN-DFN-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 199 (272)
|.++..++... ... .+. .....++++.++++..++.+.++.... ++..++.+++.+++++.|+++
T Consensus 299 ----~a~l~~~~i~~-----~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~ 366 (443)
T PRK08297 299 ----CGIMAGRRVDE-----VEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEE---DGLVENAARQGEYLLARLEELA 366 (443)
T ss_pred ----cceecchHHHH-----hhhhhccCccccCCCCCccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence 33334433210 010 110 112334555788888888877763222 234555666666666666553
Q ss_pred ---C-C--eEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHH
Q 036024 200 ---G-I--KVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEA 270 (272)
Q Consensus 200 ---g-~--~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~ 270 (272)
+ + .+.+ .|.++.+.++... ...+...+++ +||.+.|+. ...+||+ +..+++|+++++++|++
T Consensus 367 ~~~~~~~~~vrg--~G~~~~i~~~~~~~~~~~~~~l~~-~Gvl~~~~~------~~~lr~~P~l~~t~~eid~~l~~l~~ 437 (443)
T PRK08297 367 AEFPAVVSNVRG--RGLMCAFDLPTTADRDEVIRRLWE-EGVLVLPCG------ERSIRFRPALTVTTEEIDAAIDALRR 437 (443)
T ss_pred HHCCCcceeeec--cceEEEEEecCHHHHHHHHHHHHH-CCEEEecCC------CCeEEEECCccCCHHHHHHHHHHHHH
Confidence 2 2 2233 4777778886422 2355666664 599997643 3568885 56799999999999987
Q ss_pred hC
Q 036024 271 LF 272 (272)
Q Consensus 271 ~l 272 (272)
++
T Consensus 438 ~l 439 (443)
T PRK08297 438 AL 439 (443)
T ss_pred HH
Confidence 64
No 316
>PRK06148 hypothetical protein; Provisional
Probab=99.42 E-value=1.6e-11 Score=117.63 Aligned_cols=205 Identities=17% Similarity=0.128 Sum_probs=134.0
Q ss_pred CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++.++++-..+.-.|. ..+++.++++.++|+++|+++|.||++.++...|. ..........+|. -+++|.+| .
T Consensus 784 ~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDi----vt~gK~lg-g 858 (1013)
T PRK06148 784 GPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDI----VTMGKPIG-N 858 (1013)
T ss_pred ceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcce----eeeccccc-C
Confidence 4555655544444454 55778899999999999999999999987754442 2222223334453 36799998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 199 (272)
|+.+|.++++++. .+.+..- ...++++.++++..|+.+.++.... +...++.+++.++|++.|+++
T Consensus 859 G~Plgav~~~~ei--------~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~ 927 (1013)
T PRK06148 859 GHPMGAVVTTREI--------ADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED---EDLQRNALEIGNYLLAGLRELQD 927 (1013)
T ss_pred CcceEEEEEcHHH--------HhhccCCCccccCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998877 3333221 1235556888888888888873322 345566777777777777664
Q ss_pred --CC--eEecCCCceEEEeecCCC-----C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHH
Q 036024 200 --GI--KVYGGINAPYVWAHFPGR-----K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEA 264 (272)
Q Consensus 200 --g~--~~~~~~~~~~~~i~l~~~-----~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~ 264 (272)
++ .+.+ .|.++-+++... . ...+...+++ +||.+.+.... .+.+||. +..++++++++
T Consensus 928 ~~~~i~~VrG--~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~g~~----~~vlr~~Ppl~it~~~id~~ 1000 (1013)
T PRK06148 928 RFDIIGDVRG--MGLFLGIELVTDRKTKAPATAIARYVKNGARE-RGILIGTEGPH----DNVLKIRPPLIFSRADADHL 1000 (1013)
T ss_pred hCCCceEEee--eceEEEEEecCCccccCccHHHHHHHHHHHHh-CCeEEeccCCC----CCEEEEeCCccCCHHHHHHH
Confidence 32 2222 466666766421 1 1234555555 59999764211 3678888 45699999999
Q ss_pred HHHHHHhC
Q 036024 265 SRRLEALF 272 (272)
Q Consensus 265 l~~l~~~l 272 (272)
+++|+++|
T Consensus 1001 l~~l~~~l 1008 (1013)
T PRK06148 1001 LEVLDDVL 1008 (1013)
T ss_pred HHHHHHHH
Confidence 99998764
No 317
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.41 E-value=2.7e-11 Score=103.09 Aligned_cols=180 Identities=20% Similarity=0.281 Sum_probs=117.5
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
+...++++| ++.++....+....-.+.. +++|+|++-+|.|||-.+.+ +.+|+++|+++++.+|+|+.+....+.
T Consensus 119 ~~~~l~~~gi~~~~~d~~~~~~~~~~~~~-~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q 194 (396)
T COG0626 119 FEKILQKFGVEVTFVDPGDDEALEAAIKE-PNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQ 194 (396)
T ss_pred HHHHHHhcCeEEEEECCCChHHHHHHhcc-cCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccccc
Confidence 456667788 8887776544222212222 68999999999999988865 999999999999999999999853222
Q ss_pred CCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhh-hccCCcchHHHHHHHHhcc
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIIC-TCFNGASNIAQAGGLACLS 171 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~ 171 (272)
. + ..+.. | |++.|.+|.+| ....=.|.++++++.. .+.+..... ......++.. +++.
T Consensus 195 ~---P-L~~Ga--D--IVvhSaTKyl~GHsDvl~G~v~~~~~~~-------~~~~~~~~~~~~G~~l~p~d-----A~l~ 254 (396)
T COG0626 195 R---P-LELGA--D--IVVHSATKYLGGHSDVLGGVVLTPNEEL-------YELLFFAQRANTGAVLSPFD-----AWLL 254 (396)
T ss_pred C---h-hhcCC--C--EEEEeccccccCCcceeeeEEecChHHH-------HHHHHHHHHhhcCCCCCHHH-----HHHH
Confidence 1 1 22221 2 99999999886 4455567666666662 333322222 1222233332 2333
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEecCC----------------CceEEEeecCC
Q 036024 172 SEGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYGGI----------------NAPYVWAHFPG 218 (272)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~----------------~~~~~~i~l~~ 218 (272)
..+.+.+.-+.++..+++..+.+.|++. .+ +++.|. .|..+.+.+.+
T Consensus 255 lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 255 LRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 3444566778899999999999999986 33 233332 45677888875
No 318
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.41 E-value=7.8e-12 Score=101.12 Aligned_cols=206 Identities=15% Similarity=0.134 Sum_probs=146.0
Q ss_pred CCceEEEEecCCCccccCCCH-HHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQ-NQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~-~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++.+++++---+..-|++.|+ ..+++..++|.+||+++|.||++.++...|.......-...+| +++ +.|+++-.
T Consensus 206 ~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PD--ivi--lgKalSGG 281 (427)
T KOG1402|consen 206 PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPD--IVI--LGKALSGG 281 (427)
T ss_pred CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCC--eEE--EeccccCC
Confidence 555566555558888987665 4589999999999999999999998877765333322222344 333 67888733
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
=..++.++++++. ...+......++++.++++..++.+.++-..+ +.+.++.++.-+.|+..|..+.-+
T Consensus 282 ~~Pvsavl~~~~i--------m~~~~pgeHgsTyggNpLg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~~ 350 (427)
T KOG1402|consen 282 VYPVSAVLADDDI--------MLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQKK 350 (427)
T ss_pred eeeeEEEEecHHH--------HhccCCCccccccCCChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcccc
Confidence 3457777888877 44566666777888999999999888874333 667777788888899999887322
Q ss_pred ------EecCCCceEEEeecC-----CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024 203 ------VYGGINAPYVWAHFP-----GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE 269 (272)
Q Consensus 203 ------~~~~~~~~~~~i~l~-----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~ 269 (272)
.... .|+++.+.+. +.+.-+.+..+ ++.|+...|-+ .+.+||+ +..+++|+++.++.++
T Consensus 351 ~p~~v~~VRG-rGl~~ai~i~~~~~~~~~aw~~cl~l-k~~g~LAkptH------~~IiRfaPPL~I~e~dl~eg~e~i~ 422 (427)
T KOG1402|consen 351 FPHVVKEVRG-RGLLNAIVINPSKTSGQDAWDVCLAL-KENGLLAKPTH------GNIIRFAPPLVISEEDLREGIEAIE 422 (427)
T ss_pred ccchhheeec-cceEEEEEeccccccchhHHHHHHcc-cccccccCCCC------CCeEEecCCcccCHHHHHHHHHHHH
Confidence 2332 5777777664 22334444444 55598887755 5689999 5679999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
+.+
T Consensus 423 k~i 425 (427)
T KOG1402|consen 423 KTI 425 (427)
T ss_pred HHh
Confidence 764
No 319
>PRK06149 hypothetical protein; Provisional
Probab=99.41 E-value=1.8e-11 Score=117.14 Aligned_cols=206 Identities=16% Similarity=0.112 Sum_probs=132.6
Q ss_pred CceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++.++++-..+...| ...+++.+++|.++|++||+++|.||++.++...|. ..........+|. + +++|.+| .
T Consensus 744 ~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDi--v--t~gK~lg-~ 818 (972)
T PRK06149 744 GLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDI--I--TMAKGMG-N 818 (972)
T ss_pred ceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCE--E--Eeccccc-C
Confidence 444555543344444 556778899999999999999999999977644332 1122223333442 2 7899998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 199 (272)
|..+|+++++++. .+.+... ...++.+.++++..|+.+.++.... +...++.+++-++|++.|+++
T Consensus 819 G~Pl~av~~~~~i--------~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~ 887 (972)
T PRK06149 819 GHPLGAVITRREI--------AEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE---EKLQENARRVGDHLKARLEALAD 887 (972)
T ss_pred CeeeEEEEEcHHH--------HhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999887 3333321 1123345788888888888863322 345566666667777777664
Q ss_pred --CC-eEecCCCceEEEeecCC------CC---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHH
Q 036024 200 --GI-KVYGGINAPYVWAHFPG------RK---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEAS 265 (272)
Q Consensus 200 --g~-~~~~~~~~~~~~i~l~~------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l 265 (272)
++ .... ..|.++-+++.. .. ...+...++++ ||.+.+.. . ..+.+||. +..+++++++++
T Consensus 888 ~~~~i~~vr-G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~-Gvl~~~~g---~-~~~vl~~~Ppl~it~~~id~~~ 961 (972)
T PRK06149 888 RHPLIGAVH-GMGLYLGVELVRDRQTLEPATEETAAICDRLLEL-GVIMQPTG---D-HLNILKIKPPLCLDRESADFFV 961 (972)
T ss_pred hCCCeEEEe-ecceEEEEEEecCcccCCCChHHHHHHHHHHHhC-CeEEeecC---C-CCCEEEEECCCcCCHHHHHHHH
Confidence 32 2222 246677777631 11 23455566655 99997642 1 13678987 467999999999
Q ss_pred HHHHHhC
Q 036024 266 RRLEALF 272 (272)
Q Consensus 266 ~~l~~~l 272 (272)
++|+++|
T Consensus 962 ~~l~~~l 968 (972)
T PRK06149 962 DMLDRVL 968 (972)
T ss_pred HHHHHHH
Confidence 9998864
No 320
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.40 E-value=5.8e-11 Score=102.27 Aligned_cols=190 Identities=15% Similarity=0.141 Sum_probs=117.9
Q ss_pred Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc--CCEEEEcccCCccccCC
Q 036024 18 EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN--GSIIIFDSAYAAYVTDG 94 (272)
Q Consensus 18 ~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~vi~D~~~~~~~~~~ 94 (272)
.+++.| ++..++......+.--++ +++|+|++.+|.||||.+.+ +++|+++|+++ ++++++|.++....
T Consensus 121 ~l~~~Gi~v~~vd~~d~~~l~~~l~--~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~--- 192 (395)
T PRK08114 121 ILSKLGVTTTWFDPLIGADIAKLIQ--PNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGV--- 192 (395)
T ss_pred HHHhcCcEEEEECCCCHHHHHHhcC--CCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccc---
Confidence 356788 888887542222221122 67999999999999999977 99999999998 49999999997421
Q ss_pred CCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc
Q 036024 95 CPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE 173 (272)
Q Consensus 95 ~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 173 (272)
...+..+..+ +++.|.+|.++ .+..-.|.++.+++. .+.+...........++.. +++...
T Consensus 193 -~~~pl~~GaD----ivv~S~tKyl~Ghsdv~~G~v~~~~~~--------~~~l~~~~~~~G~~~~p~~-----a~l~~r 254 (395)
T PRK08114 193 -LFKALDFGID----ISIQAGTKYLVGHSDAMIGTAVANARC--------WEQLRENSYLMGQMVDADT-----AYMTSR 254 (395)
T ss_pred -ccCHHHcCCc----EEEEcCcccccCCCcceeEEEEcCHHH--------HHHHHHHHHhccCCCCHHH-----HHHHHc
Confidence 1222333222 99999999775 344567866665544 3333322222222233332 233334
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCC-C-eEecC----------------CCceEEEeecCCCChHHHHHHHHHhcC
Q 036024 174 GLEAVHSVVDYYKENTKILIDTLASLG-I-KVYGG----------------INAPYVWAHFPGRKSWDVFAEILEKTH 233 (272)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~----------------~~~~~~~i~l~~~~~~~~~~~ll~~~g 233 (272)
+.+.+.-+.++..+++..+.+.|+++. + +++.| ..|..+.+.+++..+.+...++++.-.
T Consensus 255 gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~ 332 (395)
T PRK08114 255 GLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFS 332 (395)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCC
Confidence 445567788999999999999999872 2 22221 235567778864212344445555433
No 321
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.40 E-value=4.8e-11 Score=104.79 Aligned_cols=204 Identities=13% Similarity=0.091 Sum_probs=121.3
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++...+...|.. .+++.+++|.++|++||+++|+||++.++...|...........+|. + +++|.+. .
T Consensus 217 ~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi--~--~~gK~~~-~ 291 (431)
T TIGR03251 217 HDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDI--V--AFGKKTQ-V 291 (431)
T ss_pred CcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCE--E--EecccCc-c
Confidence 466777776556666765 57788999999999999999999999976554432222233334453 2 4788862 2
Q ss_pred ccceeEEEecccccccCCcchHH-HHH-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024 123 GVRLGWTVVPEELLFSSGFPVIN-DFN-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 199 (272)
+ |++.. ++... +.. .+. .....++++.++++..++.+.++.... +...++.+++.+++++.|+++
T Consensus 292 ~---g~~~~-~~i~~-----~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~ 359 (431)
T TIGR03251 292 C---GIMAG-RRVDE-----VADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEE---ERLVDNARVQGAHLLARLHELA 359 (431)
T ss_pred c---eEEec-chHHH-----hhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence 2 55543 32200 011 010 011233455777888877777763222 123344555555555555442
Q ss_pred ---C-CeEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024 200 ---G-IKVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL 271 (272)
Q Consensus 200 ---g-~~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~ 271 (272)
+ +.......|.++.+.++... ...+...++ ++||.+.|.. ...+|++ +..+++|+++++++|+++
T Consensus 360 ~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~-~~Gvl~~~~g------~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 360 AEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLY-REGVLLLGCG------ERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred HhCccceecccccceeEEEEeCCHHHHHHHHHHHH-hCCeEEecCC------CCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 2 22211224677778886432 234555665 4599997642 3568887 567999999999999763
No 322
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.39 E-value=2.4e-11 Score=102.68 Aligned_cols=143 Identities=16% Similarity=0.172 Sum_probs=96.1
Q ss_pred HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
..++.-| +++++|++.++-..++ ++. .++|+++.+++.+|.+|+++| +++|+++|+++++.+++|.+++-
T Consensus 149 ~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav--- 222 (428)
T KOG1549|consen 149 RALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV--- 222 (428)
T ss_pred HHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc---
Confidence 4556677 9999999844323333 222 389999999999999999998 99999999999999999999985
Q ss_pred CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc--cc-cCCcchHHHHHhhhhhccCCcchHHHHHHHHh
Q 036024 93 DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL--LF-SSGFPVINDFNRIICTCFNGASNIAQAGGLAC 169 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 169 (272)
+..+..+.++..+ ++..|.+|.+|+|| +|++.+++.. +. .+....-.+.+.+...+-.++.......+.++
T Consensus 223 G~i~vDV~eln~D----~~s~s~HK~ygp~~--iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~ 296 (428)
T KOG1549|consen 223 GKIPVDVQELNAD----FLSISAHKIYGPPG--IGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEF 296 (428)
T ss_pred CCccccHHHcCch----heeeecccccCCCc--ceEEEEccCCCcccccCcccCCccccccccCCcCchhhhhhHHHHHH
Confidence 3334455555432 77788999999999 9999998622 11 11111112334444444444444555545555
Q ss_pred cc
Q 036024 170 LS 171 (272)
Q Consensus 170 l~ 171 (272)
+.
T Consensus 297 ~~ 298 (428)
T KOG1549|consen 297 VN 298 (428)
T ss_pred HH
Confidence 54
No 323
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=1.1e-10 Score=97.12 Aligned_cols=229 Identities=17% Similarity=0.172 Sum_probs=152.1
Q ss_pred eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024 24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP 96 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~ 96 (272)
+.++++++.+ ...+|.++ ..+||+|+.=...+|-- -+.+++.++|++.|+++++|.+|. +++.++..
T Consensus 140 ~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~SaY~r~-----id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~ 213 (413)
T COG0112 140 NVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGGSAYSRP-----IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVH 213 (413)
T ss_pred EeEecccccc-cCccCHHHHHHHHHHhCCCEEEECccccccc-----cCHHHHHHHHHHhCceEEehHHHHHHHHhcccC
Confidence 7788899866 44445333 37899998854444432 238999999999999999999996 56666654
Q ss_pred CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHH-hcccccH
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLA-CLSSEGL 175 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~l~~~~~ 175 (272)
++..... + ++.+|-+|++ +|-|-|.+.++++.+ .+.+.+...+...+.+.....|+.+ ++.+-..
T Consensus 214 p~P~~~A---d--vVTtTTHKTl--rGPrGG~Il~~~eel-------~kkin~aVFPg~qggpl~HviAakaVa~~Eal~ 279 (413)
T COG0112 214 PNPLPHA---D--VVTTTTHKTL--RGPRGGIILTNDEEL-------AKKINSAVFPGLQGGPLMHVIAAKAVAFKEALE 279 (413)
T ss_pred CCCCCcc---c--eEeCCcccCC--CCCCceEEEeccHHH-------HHHhhhhcCCccCCChHHHHHHHHHHHHHHHcC
Confidence 4333321 2 8999999998 566778888886332 5667665544444333333332222 2222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCC-CC---CCCCCe
Q 036024 176 EAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSG-FG---PGGEEY 249 (272)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~-~~---~~~~~~ 249 (272)
-..++..+++-+|++.|.+.|.+.|+++... -+...+.+++.. ..+....+.+|++.||.++--.- |. +-.+..
T Consensus 280 p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSG 359 (413)
T COG0112 280 PEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSG 359 (413)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCcc
Confidence 3447888999999999999999999998763 235567788872 23456678888999999853222 22 233678
Q ss_pred EEEEc------cCCHHHHHHHHHHHHHhC
Q 036024 250 IRISG------FGHRESILEASRRLEALF 272 (272)
Q Consensus 250 ~R~s~------~~~~~~i~~~l~~l~~~l 272 (272)
+|++. .-.++|+.+.-+.|.++|
T Consensus 360 IRiGtpa~TtrG~~e~e~~~Ia~~I~~vl 388 (413)
T COG0112 360 IRIGTPAVTTRGFGEAEMEEIADLIADVL 388 (413)
T ss_pred ceeccHHHhhcCCCHHHHHHHHHHHHHHH
Confidence 99994 114678888777776653
No 324
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.38 E-value=7.1e-11 Score=101.10 Aligned_cols=195 Identities=14% Similarity=0.141 Sum_probs=125.7
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++...+...|... +++.++++.++|++||+++|+||++.++ ..+...........+|.+ +++|.+| .
T Consensus 161 ~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv----~~gK~lg-g 234 (364)
T PRK04013 161 KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIV----TMGKGIG-N 234 (364)
T ss_pred CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEE----Eeccccc-C
Confidence 4677777776666666644 5677999999999999999999999977 444433333333344522 5699998 7
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
|+.+|.++.+.+.. . ....++++.++++..|+.+.++....+ ...++.++. +. .+...-+.
T Consensus 235 G~P~~a~~~~~~~~--------~----~~~~~T~~gnp~~~aaa~a~l~~i~~~---~l~~~~~~~---l~-~l~~~~v~ 295 (364)
T PRK04013 235 GVPVSLTLTNFDVE--------R----GKHGSTFGGNPLACKAVAVTLRILRRE---RLVEKAGEK---FI-EIKGERVV 295 (364)
T ss_pred CceeEEEEeccccc--------C----CCcCCCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHH---HH-HhccCcce
Confidence 89999988876651 1 124456668888888888888733331 122222221 21 22211111
Q ss_pred EecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 203 VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 203 ~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
-.. ..|.++-+++.. ....+...++++ |+.+.+. +.+.+||. +..+++|+++++++|++++
T Consensus 296 ~vR-G~Gl~~gve~~~-~~~~i~~~~~~~-Gll~~~~------g~~vlr~~Ppl~it~~~i~~~~~~l~~~l 358 (364)
T PRK04013 296 TTR-GRGLMIGIVLKK-PVGKYVEELQNR-GYLVHTA------GQRVIRLLPPLIISKDTMEEAKSAIEGVI 358 (364)
T ss_pred eee-eCcEEEEEEeCC-cHHHHHHHHHhC-CcEEeeC------CCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 122 246777777753 234555555554 9998653 24679998 4569999999999998764
No 325
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.38 E-value=7.5e-11 Score=100.04 Aligned_cols=242 Identities=17% Similarity=0.144 Sum_probs=160.6
Q ss_pred cccccCccc-chHHhcccceeEEeecCCCCCc--ccC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 6 SVIVGQAGD-LEDEVGKYCNIEYLECGPGNNF--FPD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~--~~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
++..+.|+. +...++++|++..+...+..++ .++ ++..++.+.+.+++.+..||+.++ ++.+.+++
T Consensus 98 ~~~tG~fg~r~~~ea~~~g~v~~~~~~~~~~~~~~p~~~~~~~~~d~~~v~~t~NETstGv~~~--------~~~~~~~~ 169 (364)
T PRK12462 98 YVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAELDWDARAPFRHYVSNETVEGLQFP--------DAAGLPDS 169 (364)
T ss_pred EEeCCHHHHHHHHHHHhcCCceEecCcCCCCCCcCCCHHHhccCCCCcEEEEccCCCCceEecC--------cccccCCC
Confidence 355666666 7778888885544442222222 333 222357889999999999999986 22333689
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCC---cchHHHHHhhh--hhc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG---FPVINDFNRII--CTC 154 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~---~~~~~~~~~~~--~~~ 154 (272)
++|+|.+-.. ...+..+..+ | ++..+..|++|.|| ++.++.+++.+.... +.+.+ +.... ..+
T Consensus 170 llvvD~sS~~---~s~pid~~~~----d--vi~agsQKnlgP~G--ltvvivs~~al~~~~~~~p~~ld-y~~~~~~~s~ 237 (364)
T PRK12462 170 PLIADMSSDF---MSRPFDVEAY----G--MVYAHAQKNLGPAG--VTVAIIRRALLERVPDTLPPMLD-FRTHVEHRSN 237 (364)
T ss_pred eEEEEcCchh---hCCCCChHHc----c--EEEeeccccCCCCc--eEEEEECHHHHhhccccCCchhh-HHHHHhcCCC
Confidence 9999999764 2223444444 1 77778899999888 677888887754322 22222 22222 234
Q ss_pred cCCcchHHHHHHHHhcccccHH--HHHHHHHHHHHHHHHHHHHHHhCC-CeEec----CCCceEEEeecCCCChHHHHHH
Q 036024 155 FNGASNIAQAGGLACLSSEGLE--AVHSVVDYYKENTKILIDTLASLG-IKVYG----GINAPYVWAHFPGRKSWDVFAE 227 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~----~~~~~~~~i~l~~~~~~~~~~~ 227 (272)
.++++....+++...++....+ .++.+.++.+++++.+++.+.... +.... ..+-+.+.+.+++..-++.+..
T Consensus 238 ~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~ 317 (364)
T PRK12462 238 YNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPRLDTLFKE 317 (364)
T ss_pred CCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHHHHHHHHH
Confidence 5578899999888888755444 789999999999999999999883 44332 1234556677765444455555
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
.++++|+.-..|+.- -+.+|.|+++ +.|.++.+++-++++
T Consensus 318 ~a~~~gl~~lkGhr~----vgg~Ras~yna~~~e~v~~L~~fm~~f 359 (364)
T PRK12462 318 QSTEAGFCGLSGHRS----IGGIRASLYNAVSEQAVSRLCAFLKDF 359 (364)
T ss_pred HHHHCCCccccCCcc----cCceEEEcCCCCCHHHHHHHHHHHHHH
Confidence 567779988766522 4669999866 788888888877654
No 326
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.37 E-value=1.2e-10 Score=101.89 Aligned_cols=162 Identities=19% Similarity=0.222 Sum_probs=98.3
Q ss_pred Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 18 EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 18 ~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
.+.+.| +++.++ +.+ .++ +++ .+++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|+++.....
T Consensus 128 ~l~~~Gi~v~~vd-d~~---d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~- 199 (436)
T PRK07812 128 TLPKLGIEVSFVE-DPD---DLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL- 199 (436)
T ss_pred HhhcCeEEEEEEC-CCC---CHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-
Confidence 345677 777774 222 122 222 268899999999999999987 89999999999999999999864111
Q ss_pred CCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccccccc-CC----------------------cchHHHHH-h
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS-SG----------------------FPVINDFN-R 149 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~-~~----------------------~~~~~~~~-~ 149 (272)
..++ .+. .| +++.|++|.+|..|--+|.+++.+..+.- .. +.++.... .
T Consensus 200 --~~pl-~~G--aD--ivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (436)
T PRK07812 200 --IRPL-EHG--AD--IVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQ 272 (436)
T ss_pred --CCch-hcC--CC--EEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHH
Confidence 1122 221 12 77899999998777667776664322100 00 00000111 0
Q ss_pred hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
.........++. . +++...+.+.+..+.++..+++..+.+.|+++
T Consensus 273 ~~~~~G~~l~p~--~---a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~ 317 (436)
T PRK07812 273 LLRDLGSAISPF--N---AFLIAQGLETLSLRIERHVANAQRVAEFLEAR 317 (436)
T ss_pred HHHhcCCCCCHH--H---HHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 111112222222 1 22222344556778889999999999999987
No 327
>PRK07046 aminotransferase; Validated
Probab=99.37 E-value=7.1e-11 Score=104.06 Aligned_cols=201 Identities=13% Similarity=0.048 Sum_probs=123.1
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
.++.+|++--.+...|.. .+++.++++.++|+++|+++|.||++. +..+... ....+...+|.+ +++|.+| .
T Consensus 217 ~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg-~~~~~gv~PDi~----t~gK~lg-g 289 (453)
T PRK07046 217 GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGG-YTRAHGLEPDFL----VVGKPIA-G 289 (453)
T ss_pred CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcc-hhHHhCCCccce----eehhhhc-C
Confidence 455556654334444544 455779999999999999999999987 3222111 112223234422 5899998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHh---------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNR---------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI 193 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 193 (272)
|+.+|.++++++. .+.+.. ....++++.++++..|+.+.++.... ++..++.+++.++++
T Consensus 290 G~Pi~av~g~~~i--------~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~ 358 (453)
T PRK07046 290 GVPCAVYGFSAEL--------AERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT---EAAYAHMLALAARLA 358 (453)
T ss_pred CCcceeeeehHHH--------HHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHH
Confidence 9999999998887 444431 11233555788888888888763222 224455555555555
Q ss_pred HHHHh----CCC--eEecCCCceEEEeecC-C-C----------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEE
Q 036024 194 DTLAS----LGI--KVYGGINAPYVWAHFP-G-R----------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRI 252 (272)
Q Consensus 194 ~~L~~----~g~--~~~~~~~~~~~~i~l~-~-~----------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~ 252 (272)
+.|++ .++ .+.+. +. .+.+.+. + . + ...+...++++ ||.+.|. .+.+++
T Consensus 359 ~~L~~l~~~~~~~~~v~g~-G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~-------~~~~~~ 428 (453)
T PRK07046 359 AGLRAVIARHGLPWHVTRV-GA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNR-GVLITPF-------HNMMLV 428 (453)
T ss_pred HHHHHHHHhCCCCeEEEEe-Cc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHC-CCEEecc-------cCcEEE
Confidence 55554 443 33442 33 3334331 1 0 1 12344555565 9998752 235788
Q ss_pred EccCCHHHHHHHHHHHHHhC
Q 036024 253 SGFGHRESILEASRRLEALF 272 (272)
Q Consensus 253 s~~~~~~~i~~~l~~l~~~l 272 (272)
+...+++|++++++++++++
T Consensus 429 ~p~~t~~did~~~~~~~~~l 448 (453)
T PRK07046 429 CPATTAADVDRLVAAFDACL 448 (453)
T ss_pred eCCCCHHHHHHHHHHHHHHH
Confidence 87779999999999998764
No 328
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.37 E-value=1.4e-10 Score=108.20 Aligned_cols=245 Identities=11% Similarity=0.028 Sum_probs=150.9
Q ss_pred chHHhcccc-eeEEeecCCCCCcccC-CCC-C----CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
....++..| +++.++.+.++..+++ +++ . .++++|++++|+| +|..- +++++|+++|+++|..+++|.++
T Consensus 591 nPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e--~~I~eI~~iah~~G~~v~VDgAq 667 (939)
T TIGR00461 591 NPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFE--PTIQHACDIVHSFGGQVYLDGAN 667 (939)
T ss_pred CHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceec--ccHHHHHHHHHHcCCEEEEEecC
Confidence 445577789 9999999755444443 222 1 4888999999999 78763 23999999999999999999998
Q ss_pred CccccCCCCCCccccCCCCCceEEEecCccccCC----CccceeEEEecccccccCCcchH-HHH------Hhh-hhhcc
Q 036024 88 AAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF----TGVRLGWTVVPEELLFSSGFPVI-NDF------NRI-ICTCF 155 (272)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~r~G~~~~~~~~~~~~~~~~~-~~~------~~~-~~~~~ 155 (272)
...... ......+. --++.+|.+|.|+. .|--+|.+.+.+.+....--+.. ... ... .....
T Consensus 668 ~~al~~--l~~Pg~~G----aDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~ 741 (939)
T TIGR00461 668 MNAQVG--LTSPGDLG----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAA 741 (939)
T ss_pred hhhCCC--CCCccccC----CCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcccccccccc
Confidence 541111 11122222 12889999997652 34447999888765321100000 000 000 01111
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceE---EEeecC------CCChHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPY---VWAHFP------GRKSWDVF 225 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~---~~i~l~------~~~~~~~~ 225 (272)
.+.+.....++...+..-+.+.+++..+..-.+++++.+.|.+ ++++..+. .+.+ +.++++ +....++.
T Consensus 742 ~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIa 820 (939)
T TIGR00461 742 PYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVA 820 (939)
T ss_pred ccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHH
Confidence 1222222333444455556677888889999999999999988 55554432 2221 445555 35677888
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
++|++. |+..-. ..|...+.-.+|.+-..+++|+|++++++.++
T Consensus 821 krL~d~-G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I 864 (939)
T TIGR00461 821 KRLQDY-GFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAI 864 (939)
T ss_pred HHHHhC-Ceeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHH
Confidence 888777 987533 33332233345556667899999999988653
No 329
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.36 E-value=3e-11 Score=103.78 Aligned_cols=190 Identities=19% Similarity=0.294 Sum_probs=113.8
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC-CEEEEcccCCccccCC
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG-SIIIFDSAYAAYVTDG 94 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~-~~vi~D~~~~~~~~~~ 94 (272)
..+...| ++..++......+.--++ +++++|++-+|.||+..+.+ +++|+++|+++| +++++|+.+......
T Consensus 113 ~~l~~~gv~v~~~d~~d~~~l~~~l~--~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~- 186 (386)
T PF01053_consen 113 ELLPRFGVEVTFVDPTDLEALEAALR--PNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ- 186 (386)
T ss_dssp HCHHHTTSEEEEESTTSHHHHHHHHC--TTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC-
T ss_pred hhhcccCcEEEEeCchhHHHHHhhcc--ccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeee-
Confidence 3455677 777776643222221122 58999999999999988755 999999999998 999999999752111
Q ss_pred CCCCccccCCCCCceEEEecCccccC-CCccceeEEEecc--cccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcc
Q 036024 95 CPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPE--ELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLS 171 (272)
Q Consensus 95 ~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 171 (272)
.+ ..+.. | +++.|++|.++ ....-.|.+++++ ++ .+.+...........++.... +.
T Consensus 187 --~p-L~~Ga--D--ivv~S~TKyl~Ghsdv~~G~vv~~~~~~~--------~~~l~~~~~~~G~~~~p~da~-----ll 246 (386)
T PF01053_consen 187 --NP-LELGA--D--IVVHSATKYLSGHSDVMGGAVVVNGSSEL--------YDRLREFRRLLGATLSPFDAW-----LL 246 (386)
T ss_dssp ---G-GGGT---S--EEEEETTTTTTTSSSE-EEEEEESSHHHH--------HHHHHHHHHHHT-B--HHHHH-----HH
T ss_pred --cc-CcCCc--e--EEEeeccccccCCcceeeEEEEECchhhh--------hhhhcchhhhcCccchHHHHH-----HH
Confidence 12 22221 2 99999999885 4444467777765 33 444544443333323332222 22
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC----------------CCceEEEeecCCCChHHHHHHHHHhcC
Q 036024 172 SEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG----------------INAPYVWAHFPGRKSWDVFAEILEKTH 233 (272)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~i~l~~~~~~~~~~~ll~~~g 233 (272)
..+.+.+.-+.++..+++..+.+.|+++ .+. +..| ..|..+.+.+++.. +...++++.-.
T Consensus 247 ~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~--~~~~~f~~~l~ 324 (386)
T PF01053_consen 247 LRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE--EAARRFLDALK 324 (386)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH--HHHHHHHHH-S
T ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch--hhhHhHHhhhh
Confidence 2334556778899999999999999997 332 3322 23447888887532 33444444444
Q ss_pred e
Q 036024 234 I 234 (272)
Q Consensus 234 i 234 (272)
+
T Consensus 325 l 325 (386)
T PF01053_consen 325 L 325 (386)
T ss_dssp S
T ss_pred h
Confidence 3
No 330
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.35 E-value=2e-10 Score=98.87 Aligned_cols=188 Identities=18% Similarity=0.217 Sum_probs=114.4
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
+...+...| +++.++.++...+.++. +++|+|++.+|.|||+.+.+ +++|+++|++++ +++|.++... +.
T Consensus 120 ~~~~~~~~Gi~v~fvd~~~~~~~~l~~---~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~ 190 (384)
T PRK06434 120 FNKVLKTLGIHVDYIDTDRLNSLDFDP---SNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YN 190 (384)
T ss_pred HHHHHHhcCcEEEEECCCChhheeecC---CCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-cc
Confidence 335667788 99999987644555442 36899999999999998855 999999999998 4679997421 11
Q ss_pred CCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS 172 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 172 (272)
..++ .... | +++.|.+|.++.+| .-.|.++++++.+ .+.+...........+.. . +++..
T Consensus 191 --~~pl-~~ga--D--ivv~S~tK~i~G~~d~~gG~vv~~~~~~-------~~~~~~~~~~~G~~~~~~--~---A~l~~ 251 (384)
T PRK06434 191 --QNPL-DLGA--D--VVIHSATKYISGHSDVVMGVAGTNNKSI-------FNNLVERRKTLGSNPDPI--Q---AYLAL 251 (384)
T ss_pred --CCch-hcCC--C--EEEeecccccCCCCCceEEEEecCcHHH-------HHHHHHHHHhcCCCCCHH--H---HHHHH
Confidence 1222 2222 2 88999999996433 3356666655432 333333322222222322 2 12222
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEecC----------CCceEEEeecCCCChHHHHHHHHHhcC
Q 036024 173 EGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYGG----------INAPYVWAHFPGRKSWDVFAEILEKTH 233 (272)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----------~~~~~~~i~l~~~~~~~~~~~ll~~~g 233 (272)
.+.+.+..+.++.++++..+.+.|+.+ .+ ++..| ..|..+.+.+++ .+...++++.-.
T Consensus 252 ~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~---~~~~~~f~~~l~ 321 (384)
T PRK06434 252 RGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS---MEDVHKFIRNLE 321 (384)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC---HHHHHHHHHhCC
Confidence 233445777888899999999999987 23 23222 235567788864 233444444433
No 331
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.33 E-value=1.5e-10 Score=101.47 Aligned_cols=100 Identities=18% Similarity=0.294 Sum_probs=72.3
Q ss_pred hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCC
Q 036024 19 VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR 97 (272)
Q Consensus 19 ~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~ 97 (272)
+.+.| +++.++.+....+.--+ .+++|+|++.+|+||||.+.+ +++|+++|+++|+++|+|.++..... ..
T Consensus 124 l~~~Gi~v~~vd~~d~~~l~~~i--~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~---~~ 195 (433)
T PRK08134 124 LRRFGIETTFVKPGDIDGWRAAI--RPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL---LR 195 (433)
T ss_pred HhhCCeEEEEECCCCHHHHHHhc--CCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc---CC
Confidence 45678 88888875111111112 278999999999999999987 89999999999999999999864221 12
Q ss_pred CccccCCCCCceEEEecCccccCCCccceeEEEe
Q 036024 98 SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV 131 (272)
Q Consensus 98 ~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~ 131 (272)
++ .+.. -+++.|.+|.+|.+|-.+|.+++
T Consensus 196 pl-~~Ga----D~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 196 PF-EHGA----DLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred ch-hcCC----CEEEeccccccCCCCCceEEEEE
Confidence 22 2322 28899999999877776777655
No 332
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.32 E-value=1.4e-10 Score=100.06 Aligned_cols=212 Identities=12% Similarity=0.101 Sum_probs=132.3
Q ss_pred CceEEEEecCCC-ccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc-c-cc----C--CCCCCc----cccCCCCCceEE
Q 036024 45 RTDIIFFCSPNN-PTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA-Y-VT----D--GCPRSI----YEIPGAREVAIE 111 (272)
Q Consensus 45 ~~~~i~~~~p~n-ptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~-~-~~----~--~~~~~~----~~~~~~~~~~i~ 111 (272)
+++++.+.+++| ..|+.+|.++++++.++|++||+.+++|.++.. - .+ . -...++ .++....| .+
T Consensus 170 ~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD--~~ 247 (450)
T TIGR02618 170 KIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD--GC 247 (450)
T ss_pred ccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc--EE
Confidence 455788888877 458999999999999999999999999999874 1 11 0 112344 22222223 57
Q ss_pred EecCccccCCC-ccceeEEEecccccccCCcchHHHHHhhhhh--ccC---CcchHHHHHHHHhcccccHHHHHHHHHHH
Q 036024 112 ISSFSKFSGFT-GVRLGWTVVPEELLFSSGFPVINDFNRIICT--CFN---GASNIAQAGGLACLSSEGLEAVHSVVDYY 185 (272)
Q Consensus 112 ~~s~sK~~g~~-g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 185 (272)
..|..|..+.| | |+++.+++.+ .++.+..... ... +.+.....|+...+.+... ....++-
T Consensus 248 ~~S~~Kd~~~~~G---G~l~~~d~~l-------~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r 314 (450)
T TIGR02618 248 TMSGKKDCLVNIG---GFLCMNDDEM-------FQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHR 314 (450)
T ss_pred EEeeccCCCCCCc---eEEEeCCHHH-------HHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHH
Confidence 88999998866 5 7777555553 4444433211 111 1122233333333432221 1233444
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCceEEEeecC---------CCChHHHHHHHHHhcCeEeeCCCCCC----CCC------
Q 036024 186 KENTKILIDTLASLGIKVYGGINAPYVWAHFP---------GRKSWDVFAEILEKTHITTVPGSGFG----PGG------ 246 (272)
Q Consensus 186 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~---------~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~------ 246 (272)
.++.++|.+.|.+.|+.+..|.+|..++++.. .-....+..+|..+.||.-.--..+. +.+
T Consensus 315 ~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~ 394 (450)
T TIGR02618 315 VKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRP 394 (450)
T ss_pred HHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCC
Confidence 45688999999999999987888999999753 12455677788888888754322221 111
Q ss_pred -CCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 247 -EEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 247 -~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
-..+|+++- -|.++++...+++..+
T Consensus 395 ~~el~rlaiprr~yt~~h~~~v~~~~~~~ 423 (450)
T TIGR02618 395 KLELVRLTIPRRVYTYAHMDVVADGIIKL 423 (450)
T ss_pred ccceeeeccccccccHhHHHHHHHHHHHH
Confidence 257999972 2777888777777653
No 333
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.31 E-value=2.6e-10 Score=105.89 Aligned_cols=240 Identities=14% Similarity=0.125 Sum_probs=141.5
Q ss_pred HHhcccc-eeEEeecCCCCCcccC-CCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPD-LKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
..+...| +++.++.++++...++ +++. +++.++++++|++-++. .+++++|+++|+++|+.+++|.++..
T Consensus 606 asa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv~vDgA~~~ 682 (954)
T PRK12566 606 ASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQVYMDGANLN 682 (954)
T ss_pred HHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEEEEEeeChh
Confidence 4466778 9999999865433333 2221 46666777777765543 36699999999999999999999863
Q ss_pred cccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccc---cccC-CcchHHHHHhhh-hhccCCcch
Q 036024 90 YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEEL---LFSS-GFPVINDFNRII-CTCFNGASN 160 (272)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~---~~~~-~~~~~~~~~~~~-~~~~~~~~~ 160 (272)
...+ ...+..+..+ ++.++.+|+|+.| |.-+|.+.+.+.+ +... .........+.. .....+.+.
T Consensus 683 -a~~~-l~~Pg~~GAD----i~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa 756 (954)
T PRK12566 683 -AQVG-LARPADIGAD----VSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSA 756 (954)
T ss_pred -hccC-CCChhhcCCC----EEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchH
Confidence 1111 1112333322 8999999988633 3335655555522 1100 000000000011 111112222
Q ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCce---EEEeec---C---CCChHHHHHHHHH
Q 036024 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAP---YVWAHF---P---GRKSWDVFAEILE 230 (272)
Q Consensus 161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---~~~i~l---~---~~~~~~~~~~ll~ 230 (272)
....++...+..-+.+ +++.......+++++.+.|.+. ++.+.++ .+. -+.+.+ + +.+..++..+|+
T Consensus 757 ~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~-~~~~~hEfii~~~~l~~~~g~~~~dvakRL~- 833 (954)
T PRK12566 757 SILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYRGR-NERVAHECILDLRPLKAQTGISEEDVAKRLM- 833 (954)
T ss_pred HHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCC-CCCeeeEEEEEccccccccCCCHHHHHHHHH-
Confidence 2234445555555555 6777777788999999999873 4444222 222 122333 2 245577888888
Q ss_pred hcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 231 KTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 231 ~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
++||.... ..| +. .+.+|++. +.+++|+|+++++|+++
T Consensus 834 d~Gihapt-~~f-Pv-~~~LmIepTE~eskeEIDrf~eAL~~I 873 (954)
T PRK12566 834 DYGFHAPT-MSF-PV-PGTLMVEPTESESKAELDRFVEAMLSI 873 (954)
T ss_pred HCCcEEeE-Eee-cc-CCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence 66998643 333 43 77899995 67999999999998765
No 334
>PLN02880 tyrosine decarboxylase
Probab=99.30 E-value=3.2e-10 Score=100.77 Aligned_cols=248 Identities=14% Similarity=0.004 Sum_probs=148.4
Q ss_pred chHHhcccc----eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 15 LEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 15 ~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
....+.-+| .++.+|.+.++++..|++.+ ..+-+|+-+-...+||.+-| +++|+++|+++|+
T Consensus 194 v~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~i 270 (490)
T PLN02880 194 LQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNGM 270 (490)
T ss_pred HHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcCC
Confidence 345555566 37899998655666664432 12334555577999999966 9999999999999
Q ss_pred EEEEcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHhhh------
Q 036024 80 IIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNRII------ 151 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~~~------ 151 (272)
++.+|.+|+++...- .... .+.+...--.+..+++|.++ ...-+|.+..++... ...+..-.+.+....
T Consensus 271 wlHVDaA~gg~~~~~~~~~~--~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~ 347 (490)
T PLN02880 271 WFHVDAAYAGSACICPEYRH--YIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSV 347 (490)
T ss_pred EEEEehhhHHHHHhCHHHHH--HhcCchhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCC
Confidence 999999999754321 1110 11221111266778999886 556789888875321 000000000110000
Q ss_pred -hhccCC---cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC--Ch---
Q 036024 152 -CTCFNG---ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR--KS--- 221 (272)
Q Consensus 152 -~~~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~--~~--- 221 (272)
.....+ +.......+...++..+.+.+.++.++.-+.++++.+.+++. ++++..+.....+.+++++. +.
T Consensus 348 ~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~ 427 (490)
T PLN02880 348 VDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNG 427 (490)
T ss_pred CChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhH
Confidence 000000 000001112222444556666777777779999999999876 89988876666777777531 11
Q ss_pred ----HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC---CHHHHHHHHHHHHHh
Q 036024 222 ----WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG---HRESILEASRRLEAL 271 (272)
Q Consensus 222 ----~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~---~~~~i~~~l~~l~~~ 271 (272)
..+..+|.++..+.+.+.. -.+..++|+++.+ ++++++.+++.|+++
T Consensus 428 ~~~n~~l~~~l~~~g~~~v~~t~---~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~ 481 (490)
T PLN02880 428 NKLNHDLLDAVNSSGKIFISHTV---LSGKYVLRFAVGAPLTEERHVTAAWKVLQDE 481 (490)
T ss_pred HHHHHHHHHHHHhCCCEEEEEEE---ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 3456666666677775433 2346799999633 678999999988764
No 335
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.30 E-value=3.5e-10 Score=105.30 Aligned_cols=207 Identities=14% Similarity=0.115 Sum_probs=134.2
Q ss_pred CceEEEEecC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSP-NNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++.++++--. +.-.|+.+ +++.+++|.++|++||+++|.||++.+|...|.......+...+|.+ +++|.++ .
T Consensus 584 ~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi----~~gKgLt-g 658 (817)
T PLN02974 584 HIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIA----CYAKLLT-G 658 (817)
T ss_pred CEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEE----eeccccc-C
Confidence 4555555432 67778875 67779999999999999999999999886666544444444455533 5899998 8
Q ss_pred c-cceeEEEecccccccCCcchHHHHH------hhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFN------RIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILID 194 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~ 194 (272)
| +.+|.++++++.. +.+. .+....+++.++++..|+.+.++.... +..+...+..++..+++.+
T Consensus 659 G~~Plaa~l~~~~I~--------~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~ 730 (817)
T PLN02974 659 GLVPLAATLATEEVF--------EAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDE 730 (817)
T ss_pred CCCccEEEEEcHHHH--------HhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 8 6899999998883 3332 223456777889999888888873222 2223344444444444444
Q ss_pred HH----HhCC-CeEecCCCceEEEeecCCCC---------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCH
Q 036024 195 TL----ASLG-IKVYGGINAPYVWAHFPGRK---------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHR 258 (272)
Q Consensus 195 ~L----~~~g-~~~~~~~~~~~~~i~l~~~~---------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~ 258 (272)
.| .++. +.-.. .-|.+..+++.... ...+...++.+.||.++|.. +.+|+. +..++
T Consensus 731 ~l~~~l~~~p~V~~VR-g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-------nvi~l~pP~~i~~ 802 (817)
T PLN02974 731 ELVRAISSLPNVERVV-SLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-------NVVYLMCGPTTSP 802 (817)
T ss_pred HHHHHHhhCCCeeEEE-eeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-------CEEEEeCCCCCCH
Confidence 44 3332 21122 24667777774211 12344555525699998732 467875 46799
Q ss_pred HHHHHHHHHHHHhC
Q 036024 259 ESILEASRRLEALF 272 (272)
Q Consensus 259 ~~i~~~l~~l~~~l 272 (272)
++++++++.+.+.|
T Consensus 803 e~l~~~~~~l~~~~ 816 (817)
T PLN02974 803 ETCTRLLRKVYRRL 816 (817)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 336
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.29 E-value=3.7e-11 Score=91.71 Aligned_cols=120 Identities=17% Similarity=0.123 Sum_probs=84.3
Q ss_pred cccccccC-cccch-HHhcccc-eeEEeecCCCCCcccC---C---CCCCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQ-AGDLE-DEVGKYC-NIEYLECGPGNNFFPD---L---KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~-~~~~~-~~~~~~g-~~~~~~~~~~~~~~~d---l---~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.+++..+ ++... ..+...| +++.++.+.+.....+ + ...++++++++++++||+|...+ .++|.++|
T Consensus 42 ~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~ 118 (170)
T cd01494 42 DEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIA 118 (170)
T ss_pred CEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHH
Confidence 34455443 33444 6667778 9999988765443332 1 12378899999999999999987 58889999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP 132 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~ 132 (272)
+++|+++|+|++|..+...... .... ..+..+++.|++|.+|. .++|+++++
T Consensus 119 ~~~~~~li~D~a~~~~~~~~~~---~~~~-~~~~d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 119 KEYGILLLVDAASAGGASPAPG---VLIP-EGGADVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred HHcCCEEEEecccccccccccc---cccc-cccCCEEEEEcccccCC--CceEEEEeC
Confidence 9999999999999976655322 1111 12234888999999984 568998753
No 337
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.28 E-value=9e-10 Score=104.25 Aligned_cols=238 Identities=14% Similarity=0.098 Sum_probs=145.9
Q ss_pred ccccccc-Ccccch----HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVG-QAGDLE----DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~-~~~~~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|+|++.. .+|... ..++..| +++.++.+.+ ++ ..++..+++.+| |.+|.+.+ +++|+++|+++
T Consensus 166 ~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d------~~-~~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~ 234 (954)
T PRK05367 166 NRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA------LD-HDDVFGVLLQYP-GTSGEVRD---YTALIAAAHAR 234 (954)
T ss_pred CEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC------CC-cccEEEEEEecC-CCCeeecc---HHHHHHHHHHc
Confidence 4555544 344433 4456788 9999987542 11 135545555565 68999965 99999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccc-----cCCCccceeEEEecccccccCCcchHHH------
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKF-----SGFTGVRLGWTVVPEELLFSSGFPVIND------ 146 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-----~g~~g~r~G~~~~~~~~~~~~~~~~~~~------ 146 (272)
|+++++|-...-+.. ..++.++..+ |+++|..|. +|-|| .|++.+++++.+..-.++...
T Consensus 235 Gal~~vda~~~Al~~---l~~pge~GaD----i~vgs~qkfg~P~g~GGP~--aGflavr~~~~r~lpgrivG~s~d~~g 305 (954)
T PRK05367 235 GALVAVAADLLALTL---LTPPGEMGAD----IAVGSAQRFGVPMGFGGPH--AAYFAVRDAYKRSMPGRIVGVSVDAAG 305 (954)
T ss_pred CCEEEEEehhhhccC---CCChhhcCCC----EEEeeCcccCCCCCCCCCC--EEEEEECHHHHhhCCCCeeeeecccCC
Confidence 999999875422111 2233444322 899999997 55455 899999887753322222210
Q ss_pred ---HH----------hhhhhccCCcchHHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceE
Q 036024 147 ---FN----------RIICTCFNGASNIAQAGGLACL--SSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPY 211 (272)
Q Consensus 147 ---~~----------~~~~~~~~~~~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 211 (272)
+. ++...+++-+...+..++.+.+ ...+...+++..++...++.++.+.|++.|+++..+.....
T Consensus 306 ~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~ 385 (954)
T PRK05367 306 NPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDT 385 (954)
T ss_pred CcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCe
Confidence 00 1111111111111122222221 11233567888999999999999999888888765433334
Q ss_pred EEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024 212 VWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE 269 (272)
Q Consensus 212 ~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~ 269 (272)
+.+.++ .+..++.++|+++ ||.+.. . ..+.+|+|+ .+|++|++++++.|.
T Consensus 386 ~~~~~~-~~~~~i~~~l~~~-gi~~~~---~---~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 386 LTVEVG-GDAAAVLARALAA-GINLRR---V---DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred EEEeCC-CCHHHHHHHHHHC-Cceecc---c---cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 555554 3566777777666 998832 1 145799996 568999999999985
No 338
>PLN03032 serine decarboxylase; Provisional
Probab=99.27 E-value=1.1e-09 Score=93.79 Aligned_cols=242 Identities=13% Similarity=0.061 Sum_probs=148.4
Q ss_pred cccccCccc--chHHhcccc-eeEEeecCCCCCcccC-CCCC--C---CceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 6 SVIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT--S---RTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 6 ~~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~--~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
+++.+...+ ....++.+| +++.+|.+.++.+.++ +++. + ++.+++++..+|+||.+-| +++|+++|++
T Consensus 113 ~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~ 189 (374)
T PLN03032 113 ILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKE 189 (374)
T ss_pred EEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHH
Confidence 344454444 445666677 8888898766544444 3221 2 4667888889999999955 8899999999
Q ss_pred cC-----CEEEEcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 77 NG-----SIIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 77 ~~-----~~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
++ +++.+|.+++.+...- ...+..... .....+.-|.+|.+|.| ..+|.++..++.+... ..-...+..
T Consensus 190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~--~~vDSis~s~HK~~g~P-~g~G~ll~r~~~~~~~-~~~~~Yl~~- 264 (374)
T PLN03032 190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR--KPIGSVSVSGHKFLGCP-MPCGVALTRKKHVKAL-SQNVEYLNS- 264 (374)
T ss_pred hCCCCCCeeEEEEccchhhhhhccCCCcccCCC--cCCcEEEECcccccCCC-cCeEEEEEEchhhHhh-ccCCcccCC-
Confidence 86 5899999997643221 001111111 11225566889988833 4489988887663210 000111111
Q ss_pred hhhccC-CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024 151 ICTCFN-GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL 229 (272)
Q Consensus 151 ~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll 229 (272)
...+.. +=+.....++...+...+.+.+.++.++..++++++.+.|++.++.+......+.+.+..+. ... +
T Consensus 265 ~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~f~~~~--~~~----~- 337 (374)
T PLN03032 265 RDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVVFERPM--DEA----F- 337 (374)
T ss_pred CCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEEEcCCC--cHh----H-
Confidence 111111 11222333344455556667889999999999999999999998887665566666666552 111 2
Q ss_pred HhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHH
Q 036024 230 EKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEA 270 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~ 270 (272)
.+ |..+.+ . ...+|+.+. .+++.+++++..|++
T Consensus 338 ~~-~w~l~~-~------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 338 IK-KWQLAC-E------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred hh-eeeecc-c------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 23 555542 1 247888863 478899999998875
No 339
>PLN02590 probable tyrosine decarboxylase
Probab=99.25 E-value=6.6e-10 Score=99.16 Aligned_cols=248 Identities=13% Similarity=0.015 Sum_probs=148.7
Q ss_pred chHHhcccc----eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 15 LEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 15 ~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
....+.-+| +++.+|.+.++++..|++.+ ..+-+|+-+-...+||.+ +++++|+++|++|++
T Consensus 242 v~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai---Dpl~~Ia~i~~~~g~ 318 (539)
T PLN02590 242 FRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV---DPLVPLGNIAKKYGI 318 (539)
T ss_pred HHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCC
Confidence 334555544 48889998655666664442 123344555678899988 669999999999999
Q ss_pred EEEEcccCCccccC-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHh--------
Q 036024 80 IIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNR-------- 149 (272)
Q Consensus 80 ~vi~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~-------- 149 (272)
++.+|.+|+++..- +....+ +.+.+.---+.-.++|.+. ...-+|.+++.+.. +...+..-.+.+..
T Consensus 319 WlHVDaA~GG~al~~~~~r~~--~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~ 395 (539)
T PLN02590 319 WLHVDAAYAGNACICPEYRKF--IDGIENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTV 395 (539)
T ss_pred eEEEecchhhhhhcChhhHHH--hcCCccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccC
Confidence 99999999975532 211111 1122111134447899886 55678888887642 11111000111110
Q ss_pred --hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CC----
Q 036024 150 --IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RK---- 220 (272)
Q Consensus 150 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~---- 220 (272)
....+...+-......+...++..+.+.+.++.++.-+.+++|.+.+++. ++++..+..-..+.+++.+ .+
T Consensus 396 ~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~ 475 (539)
T PLN02590 396 VNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQC 475 (539)
T ss_pred CCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHH
Confidence 00000110111222223344444556788999999999999999999887 7998876666666666642 11
Q ss_pred ---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC---CHHHHHHHHHHHHHh
Q 036024 221 ---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG---HRESILEASRRLEAL 271 (272)
Q Consensus 221 ---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~---~~~~i~~~l~~l~~~ 271 (272)
..++.+++.+...+.+.+.. -.+..++|+++.+ ++++++++++.|.+.
T Consensus 476 ~~ln~~l~~~l~~~G~~~vs~t~---~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 476 NERNRELLAAVNSTGKIFISHTA---LSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred HHHHHHHHHHHHhCCCEEEEeeE---ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 12455555555444444322 2446789999743 788999999998764
No 340
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.24 E-value=3.3e-10 Score=93.82 Aligned_cols=201 Identities=17% Similarity=0.142 Sum_probs=136.5
Q ss_pred ceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024 46 TDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV 124 (272)
Q Consensus 46 ~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 124 (272)
+.+++.-.-+.-.|.+ +++..+++..++|+++|.++|.||+..++...|......+.+..+|.+ |++|.+| .|.
T Consensus 213 vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv----TmAKgiG-nG~ 287 (442)
T KOG1404|consen 213 VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIV----TMAKGIG-NGF 287 (442)
T ss_pred eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHH----HHHhhcc-CCC
Confidence 3444444556666654 556679999999999999999999999887666444444444445544 8999999 889
Q ss_pred ceeEEEecccccccCCcchHHHHHhhh-hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CC
Q 036024 125 RLGWTVVPEELLFSSGFPVINDFNRII-CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GI 201 (272)
Q Consensus 125 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~ 201 (272)
.+|.++..++. .+-+.... ...+.+.++++..+..++++-..+ +.+.+..++...+|.+.|.++ ..
T Consensus 288 Pl~AVvtt~EI--------a~v~~~~~~~fnTyggnP~a~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h 356 (442)
T KOG1404|consen 288 PLGAVVTTPEI--------ADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKH 356 (442)
T ss_pred cceeeecCHHH--------HHHHHhccccccccCCCchhHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999988 44444444 556667888888888888874333 555666777778888888876 33
Q ss_pred eEecC--CCceEEEeecCC----------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHH
Q 036024 202 KVYGG--INAPYVWAHFPG----------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRR 267 (272)
Q Consensus 202 ~~~~~--~~~~~~~i~l~~----------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~ 267 (272)
.+.+. .-|.++-+++-. .....+.++ ++++|+.+.-|..++ ..+|++ ++.|+||++-+...
T Consensus 357 ~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~-cke~Gvlvg~g~i~G----~vfriaPPlciT~edi~f~~~~ 431 (442)
T KOG1404|consen 357 PIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQ-CKELGVLVGKGGIHG----NVFRIAPPLCITKEDIDFAVEY 431 (442)
T ss_pred CceeecccceeEEEEEEecccCCCCCcchHHHHHHHHH-HHHhCeeeecccccc----eEEEecCCeeccHHHHHHHHHH
Confidence 33332 135555555421 112234444 456699996666443 389999 57799998655553
No 341
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.24 E-value=3.4e-09 Score=91.80 Aligned_cols=213 Identities=13% Similarity=0.138 Sum_probs=133.3
Q ss_pred CceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc----cc---CC-CCCCcc----ccCCCCCceEE
Q 036024 45 RTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAAY----VT---DG-CPRSIY----EIPGAREVAIE 111 (272)
Q Consensus 45 ~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~----~~---~~-~~~~~~----~~~~~~~~~i~ 111 (272)
+++++.+.+++|.. |+.+|.++++++.++|++||+.+++|.++... .- .+ ...++. ++....| ..
T Consensus 177 ~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD--~~ 254 (460)
T PRK13237 177 NIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYAD--GC 254 (460)
T ss_pred ccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCc--EE
Confidence 45567778888887 79999999999999999999999999998732 10 00 112322 1111222 66
Q ss_pred EecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh---h--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHH
Q 036024 112 ISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC---T--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK 186 (272)
Q Consensus 112 ~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 186 (272)
..|++|.++.+- -|+++.+++.+ .++++...- . +..+.+.--..|++.-+.+... ....++--
T Consensus 255 t~S~~K~~~~~~--GG~i~t~D~eL-------~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri 322 (460)
T PRK13237 255 TMSGKKDCLVNI--GGFLAMNDEEL-------FDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRV 322 (460)
T ss_pred EEeCCCCCCCCC--ceEEEECCHHH-------HHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHH
Confidence 778999997551 38888877663 445544421 1 1112222233333333432222 13334444
Q ss_pred HHHHHHHHHHHhCCCeEecCCCceEEEeecC---------CCChHHHHHHHHHhcCeEeeCCCCC--C--CCC-------
Q 036024 187 ENTKILIDTLASLGIKVYGGINAPYVWAHFP---------GRKSWDVFAEILEKTHITTVPGSGF--G--PGG------- 246 (272)
Q Consensus 187 ~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~---------~~~~~~~~~~ll~~~gi~v~~g~~~--~--~~~------- 246 (272)
++.++|.+.|.+.|+.+..|.+|..++++.. .-....+..+|..+.||...--..+ + +.+
T Consensus 323 ~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~ 402 (460)
T PRK13237 323 GQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPK 402 (460)
T ss_pred HHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCc
Confidence 5678999999999999998888988888642 2245667788888888876422222 1 111
Q ss_pred CCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 247 EEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 247 ~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
-..+|+++- -|.++++...+++..+
T Consensus 403 ~el~rlaiprr~yt~~h~~~v~~~~~~~ 430 (460)
T PRK13237 403 LELVRLTIPRRVYTYAHMDVVADSVIKL 430 (460)
T ss_pred cceeeeccccccccHHHHHHHHHHHHHH
Confidence 257999972 2777888777776543
No 342
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.23 E-value=8.6e-10 Score=94.79 Aligned_cols=210 Identities=14% Similarity=0.055 Sum_probs=136.4
Q ss_pred CceEEEEecC--CCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 45 RTDIIFFCSP--NNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 45 ~~~~i~~~~p--~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+.-+-++.-| +..+|+.+++. .++++.++|++||+++|.||+-.+|...|....-......+|.+ +++|.++-
T Consensus 213 ~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~----~~aKGLT~ 288 (449)
T COG0161 213 ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDIL----CLAKGLTG 288 (449)
T ss_pred ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCee----eecccccc
Confidence 3334444445 54478776655 48999999999999999999999887766544444444455643 57888863
Q ss_pred CccceeEEEecccccccCCcchHHH-HHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVIND-FNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L 199 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~ 199 (272)
.=+.+|.++++++..... .+. ...+....+++.++++..|+++.++.... +...++.++...++.+.|.. +
T Consensus 289 GY~Pl~a~l~~~~I~~~~----~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~---e~l~~~~~~~~~~l~~~L~~~l 361 (449)
T COG0161 289 GYLPLSAVLTSDRIYEAF----SDGDAGAFMHGHTYSGNPLACAAALANLDILEE---EDLLERVAEIGAYLQAGLQAAL 361 (449)
T ss_pred cchhhHhHhhhHHHHHHH----hcccCCeeccCCccccCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHhc
Confidence 445577777777773211 111 23345667777899998888888874333 44556667777777777776 2
Q ss_pred -CCeEecC--CCceEEEeecCC-CC--------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHH
Q 036024 200 -GIKVYGG--INAPYVWAHFPG-RK--------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEAS 265 (272)
Q Consensus 200 -g~~~~~~--~~~~~~~i~l~~-~~--------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l 265 (272)
+-...+. .-|.+..+++.. .. ....+...+.+.|+.++|.. ..+=++ +..|++|+++++
T Consensus 362 ~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g-------~~i~~~PPliit~~eid~l~ 434 (449)
T COG0161 362 ADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG-------DVIYLMPPLIITREEIDELV 434 (449)
T ss_pred ccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC-------CEEEEcCCccCCHHHHHHHH
Confidence 2222221 246777777752 11 13344455555599999862 244455 467999999999
Q ss_pred HHHHHhC
Q 036024 266 RRLEALF 272 (272)
Q Consensus 266 ~~l~~~l 272 (272)
+++++++
T Consensus 435 ~~l~~al 441 (449)
T COG0161 435 DALREAL 441 (449)
T ss_pred HHHHHHH
Confidence 9998764
No 343
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.23 E-value=4.6e-10 Score=98.64 Aligned_cols=202 Identities=16% Similarity=0.193 Sum_probs=115.4
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccc-cCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYE-IPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.+|++ -| -.|...+.+.+++|.++|++|++++|+||++.++... ...... +...+| +.+++|.+| .|
T Consensus 187 ~~aavi~-Ep--v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~--~~g~~~~~gv~PD----i~t~gK~lg-gG 256 (431)
T PRK06209 187 RIACVIL-EP--ATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH--MRGAQKLYGIVPD----LSCFGKALG-NG 256 (431)
T ss_pred CEEEEEE-cc--ccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC--cchhhHHhCCCcc----eeeehhhhc-CC
Confidence 3444444 34 2344677889999999999999999999999765322 111222 222333 357899998 78
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----C
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS----L 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 199 (272)
+.+|+++++++............-..+...++.+++++...++.+.++.... +...++.+++.+++++.|++ +
T Consensus 257 ~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~~~~~~ 333 (431)
T PRK06209 257 FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD---EDVIERLHEQGAKLAAGVNEAAAEH 333 (431)
T ss_pred cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8899999988773210000000000111234444666777777777663222 22455666666666666654 4
Q ss_pred CCe--EecCCCceEEEeec--C--CCChH----HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024 200 GIK--VYGGINAPYVWAHF--P--GRKSW----DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269 (272)
Q Consensus 200 g~~--~~~~~~~~~~~i~l--~--~~~~~----~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~ 269 (272)
++. +.+ .+.++....+ . +.... .+..+++++ ||.+. .++++...+++++++++++|+
T Consensus 334 ~~~~~vr~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~p-----------~l~is~~ht~~dId~~l~~l~ 400 (431)
T PRK06209 334 GLQDHVRV-SGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRR-GVLMP-----------SLVVSYAHGDADIERTIDAVH 400 (431)
T ss_pred CCCeEEEe-ecceEEEEEecCCcccCCcHHHHHHHHHHHHHC-Ccccc-----------cccccccCCHHHHHHHHHHHH
Confidence 443 222 2222222221 1 11111 344555555 98761 256776679999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
+++
T Consensus 401 ~~l 403 (431)
T PRK06209 401 GAL 403 (431)
T ss_pred HHH
Confidence 764
No 344
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.21 E-value=3e-09 Score=100.79 Aligned_cols=242 Identities=12% Similarity=0.049 Sum_probs=141.2
Q ss_pred hHHhcccc-eeEEeecCCCCCcccC-CCC----C-CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG----T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
...++..| +++.++.+.++...+| ++. . .++.+|++++|++-.+... ++++|+++|+++|+++++|.++.
T Consensus 604 p~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~---~I~eI~~i~h~~G~~v~VDgA~~ 680 (954)
T PRK05367 604 PASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEE---TIREICEIVHEHGGQVYLDGANM 680 (954)
T ss_pred HHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecC---CHHHHHHHHHHcCCEEEEECcCh
Confidence 45567788 9999999866444443 221 1 3567787888887644333 49999999999999999999996
Q ss_pred ccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcchHHHHHhhh-hhccCCcchH--
Q 036024 89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPVINDFNRII-CTCFNGASNI-- 161 (272)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-- 161 (272)
.....- .....+.. | ++.+|.+|+|+.| |--+|.+.+.+.+.. .++.-........ ......++..
T Consensus 681 ~al~~l--~~pg~~GA--D--i~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p-~lpg~~v~~~~~~~~~g~v~ta~~g~ 753 (954)
T PRK05367 681 NAQVGL--ARPGDIGA--D--VSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAP-FLPGHPVQIAGGETGIGAVSAAPFGS 753 (954)
T ss_pred hhccCC--CChhhcCC--C--EEEecCcccCCCCcCCCCCceEEEeecccccc-cCCCCccCcCCCCCCcCcchhHHHHH
Confidence 322221 11122221 2 8888999997522 333778887754421 1110000000000 0011111222
Q ss_pred --HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC--ceEEEeec---C---CCChHHHHHHHHH
Q 036024 162 --AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN--APYVWAHF---P---GRKSWDVFAEILE 230 (272)
Q Consensus 162 --~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--~~~~~i~l---~---~~~~~~~~~~ll~ 230 (272)
...++...+...+.+.+++..++.-.+++++.+.|++. .+.+.++.+ ..=+.+.+ + +....++.++| .
T Consensus 754 al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL-~ 832 (954)
T PRK05367 754 ASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRL-I 832 (954)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHH-H
Confidence 22223334444566777788888889999999999874 333333211 00122333 3 24557777777 5
Q ss_pred hcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 231 KTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 231 ~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
++|+.... ..| +. .+.+|++. +.+++|+++++++++++
T Consensus 833 d~G~~~~t-~~~-pv-~~~l~i~ptE~~s~~elDr~~~al~~i 872 (954)
T PRK05367 833 DYGFHAPT-MSF-PV-AGTLMVEPTESESKAELDRFCDAMIAI 872 (954)
T ss_pred HCCCeEee-cCC-cc-CCEEEEEeeecCCHHHHHHHHHHHHHH
Confidence 55998754 223 32 67788885 66899999999998764
No 345
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.21 E-value=1.4e-09 Score=91.87 Aligned_cols=157 Identities=18% Similarity=0.245 Sum_probs=100.3
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC 95 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~ 95 (272)
......| +...+.++.-.++.--++ ++++++++-+|.||+..+.+ +++|.++|+++|+++|+|+.+......
T Consensus 135 ~~~~~~gie~~~vd~~~~~~~~~~i~--~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~-- 207 (409)
T KOG0053|consen 135 KFLPKFGGEGDFVDVDDLKKILKAIK--ENTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ-- 207 (409)
T ss_pred HHHHHhCceeeeechhhHHHHHHhhc--cCceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc--
Confidence 3344556 667776665433332233 47999999999999999966 999999999999999999999853211
Q ss_pred CCCccccCCCCCceEEEecCccccC-CCccceeEEEec-ccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc
Q 036024 96 PRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE 173 (272)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 173 (272)
....+. .| |++.|.+|.+| ....=.|.++.+ .++ ..++...........++....-.. .
T Consensus 208 --~pL~lG--AD--IV~hSaTKyi~Ghsdvi~G~iv~n~~~~--------~~~l~~~~~~lg~~~~p~~~~ll~-----R 268 (409)
T KOG0053|consen 208 --DPLPLG--AD--IVVHSATKYIGGHSDVIGGSVVLNSEEL--------ASRLKFLQEDLGWCEDPFDLFLLS-----R 268 (409)
T ss_pred --ChhhcC--CC--EEEEeeeeeecCCcceeeeEEecCcHHH--------HHHHHHHHHHhcCCCCHHHHHHHh-----c
Confidence 111221 22 99999999986 344545777776 333 555555554444445555433222 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 174 GLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
+.+.+.-+.++..+++..+.+.|+..
T Consensus 269 glktl~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 269 GLKTLHLRINKHSENALKIALLLEAH 294 (409)
T ss_pred CcchhhhhHHHHHHHHHHHHHHhhhC
Confidence 23333445566667766677777764
No 346
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.20 E-value=5.4e-09 Score=91.62 Aligned_cols=163 Identities=17% Similarity=0.223 Sum_probs=97.0
Q ss_pred HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
..+.+.| +++.++ ++. .++ +++ .+++++|++.++.||+|.+.+ +++|+++|+++|+++++|.++.....
T Consensus 127 ~~l~~~Gi~v~~vd-~~~---d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~ 199 (437)
T PRK05613 127 VTLNRLGIEVTFVE-NPD---DPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL 199 (437)
T ss_pred HHHHhcCeEEEEEC-CCC---CHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc
Confidence 3456778 888887 222 122 222 267899998899999998877 99999999999999999999864221
Q ss_pred CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe-ccccc--c------------c----C----CcchHH----
Q 036024 93 DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV-PEELL--F------------S----S----GFPVIN---- 145 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~-~~~~~--~------------~----~----~~~~~~---- 145 (272)
..+ ..+.. -+++.|++|.++..|--+|-+++ +.+.. . . . ...+..
T Consensus 200 ---~~p-~~~Ga----Divv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (437)
T PRK05613 200 ---VRP-LELGA----DVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFG 271 (437)
T ss_pred ---cCh-HHhCC----CEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHH
Confidence 111 22221 28899999998755544444444 32210 0 0 0 000000
Q ss_pred --HHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 146 --DFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 146 --~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
.............++.. +++...+.+.+..+.++..+++..+.+.|+++
T Consensus 272 ~~~~~~~~~~~G~~~~p~~-----a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~h 322 (437)
T PRK05613 272 LKARAGLLRDTGATLSPFN-----AWVTAQGLDTLSLRLERHNENAIKVAEFLNNH 322 (437)
T ss_pred HHHHHHHHHhcCCCCCHHH-----HHHHHcccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 00111112222233332 22222344556778888999999999999987
No 347
>PRK15029 arginine decarboxylase; Provisional
Probab=99.19 E-value=3.9e-09 Score=97.18 Aligned_cols=141 Identities=12% Similarity=0.063 Sum_probs=91.0
Q ss_pred EEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc-cCCCCCCcccc-----CCCCCceEEEecCccccCC
Q 036024 48 IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGCPRSIYEI-----PGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 48 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~ 121 (272)
++++++|++ -|.+.+ +++|+++|+++++.+++||+|+... +.+..+....+ ....-.++++.|.+|+++
T Consensus 315 avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~- 389 (755)
T PRK15029 315 YCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN- 389 (755)
T ss_pred EEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhccc-
Confidence 899999984 588866 8999999999999999999997533 33221111222 101122489999999995
Q ss_pred CccceeEEEeccc--ccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHh
Q 036024 122 TGVRLGWTVVPEE--LLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLAS 198 (272)
Q Consensus 122 ~g~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 198 (272)
+-.+.+++..... .+. .+++........+++++....|++......... ..++..+...+....+++.+..
T Consensus 390 alTQaS~LHv~~~~~~id------~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~ 463 (755)
T PRK15029 390 ALSQASYIHVREGRGAIN------FSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMAR 463 (755)
T ss_pred chhhhhhheeCCCccccC------HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 3334556666443 221 356666666666667777777676666533332 3456667777777778877765
Q ss_pred C
Q 036024 199 L 199 (272)
Q Consensus 199 ~ 199 (272)
+
T Consensus 464 ~ 464 (755)
T PRK15029 464 L 464 (755)
T ss_pred c
Confidence 4
No 348
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.18 E-value=8.7e-09 Score=90.61 Aligned_cols=118 Identities=17% Similarity=0.137 Sum_probs=79.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...+...| +++.++++.+ .+.+|++. .+++++|+++++ +|.. .++++|.++|++
T Consensus 112 d~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~-~~~id~~~le~~i~~~tkaVi~~~~---~G~p---~dl~~I~~la~~ 184 (438)
T PRK15407 112 DEVITVAAGFPTTVNPIIQNGLVPVFVDVELP-TYNIDASLLEAAVSPKTKAIMIAHT---LGNP---FDLAAVKAFCDK 184 (438)
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHcCcCCeEEEEeCC---CCCh---hhHHHHHHHHHH
Confidence 56777766665 666677788 8888888754 55566433 378899999864 4443 458999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEeccccc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELL 136 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~ 136 (272)
+++++|+|++|+....-. ...+..+. + +.+.|| +|.+. .|- .|+++++++.+
T Consensus 185 ~gi~vIeDaa~a~G~~~~-g~~~G~~g---d--~~~fSf~~~k~~~-~ge-GG~l~t~d~~l 238 (438)
T PRK15407 185 HNLWLIEDNCDALGSTYD-GRMTGTFG---D--IATLSFYPAHHIT-MGE-GGAVFTNDPLL 238 (438)
T ss_pred CCCEEEEECccchhhhcC-CeeeeccC---c--eEEEeCCCCCCcc-ccC-ceEEEECCHHH
Confidence 999999999998543221 22233332 2 445566 47675 333 49999988774
No 349
>PRK04311 selenocysteine synthase; Provisional
Probab=99.17 E-value=6.2e-09 Score=91.66 Aligned_cols=235 Identities=14% Similarity=0.085 Sum_probs=131.7
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCcc--c--cCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPT--G--HAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~npt--G--~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
......| +++.++.+.... .-|+++ .++++++++++++||+ | ... ++++|+++|+++|+++++|...+.
T Consensus 186 ~~~~~~G~~l~~v~~~~~t~-~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~---dl~eI~~lak~~gi~vivD~gsG~ 261 (464)
T PRK04311 186 DVMRQAGARLVEVGTTNRTH-LRDYEQAINENTALLLKVHTSNYRIEGFTKEV---SLAELAALGKEHGLPVVYDLGSGS 261 (464)
T ss_pred HHHHHCCcEEEEECCCCCCC-HHHHHHhcCccCeEEEEEcCCCccccccCCcC---CHHHHHHHHHHcCCeEEEECCCcc
Confidence 3456778 888887643211 112222 3789999999999983 4 333 499999999999999999996443
Q ss_pred cc----cC-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHH
Q 036024 90 YV----TD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA 164 (272)
Q Consensus 90 ~~----~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (272)
+. ++ +..+.+..... .+--++++|.+|.+|.| ..|++++++++ ++.+.+...............
T Consensus 262 l~~~~~~gl~~~p~~~~~l~-~GaDiv~fSg~K~LgGp--~~G~i~g~~~l--------i~~l~~~~~~r~lr~dk~~l~ 330 (464)
T PRK04311 262 LVDLSQYGLPDEPTVQELLA-AGVDLVTFSGDKLLGGP--QAGIIVGKKEL--------IARLKKHPLKRALRVDKLTLA 330 (464)
T ss_pred cccchhccCCCCCchhhHHh-cCCcEEEecCcccccCC--ceEEEEEcHHH--------HHHHhhchhHHHHhcchHHHH
Confidence 21 11 01111222110 11228999999998744 48999998877 344432111111112223333
Q ss_pred HHHHhcc---ccc--------HHHHHHHHHHHHHHHHHHHHHHHhC---CC--eEecC----CC---------ceEEEee
Q 036024 165 GGLACLS---SEG--------LEAVHSVVDYYKENTKILIDTLASL---GI--KVYGG----IN---------APYVWAH 215 (272)
Q Consensus 165 a~~~~l~---~~~--------~~~~~~~~~~~~~~~~~l~~~L~~~---g~--~~~~~----~~---------~~~~~i~ 215 (272)
+..+.+. +.. .+.+....++.+++++.+.+.|+.. ++ .+... .+ +..+.+.
T Consensus 331 ~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~ 410 (464)
T PRK04311 331 ALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLT 410 (464)
T ss_pred HHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEe
Confidence 3333332 111 1234445577888899999999875 22 33321 01 1223333
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 216 FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
..+....+ ..+.|++....|..- ...+.+.+.+. ..++|++.+.++|++++
T Consensus 411 ~~~~~~~~-l~~~lr~~~~~i~~r-----~~~~~~~ld~r~~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 411 PKDRSLEA-LAARLRLLPPPVIGR-----IEDGRLLLDLRTLEEEDEERLAAALLEAL 462 (464)
T ss_pred CCCCCHHH-HHHHHhcCCCCEEEE-----EECCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 33334444 444556644333211 12567778874 47888888888887753
No 350
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.17 E-value=2.3e-09 Score=88.60 Aligned_cols=172 Identities=17% Similarity=0.236 Sum_probs=110.2
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
+...++++| ++..+..++-..|...++ +++|+|++-+-.||.+.+++ +++|+++|+++++++|+|..+..
T Consensus 118 f~~tl~~~Gi~v~fvd~~d~~~~~~aI~--~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~at---- 188 (426)
T COG2873 118 FSHTLKRLGIEVRFVDPDDPENFEAAID--ENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFAT---- 188 (426)
T ss_pred HHHHHHhcCcEEEEeCCCCHHHHHHHhC--cccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCc----
Confidence 566778999 998888775434444344 79999999999999999977 99999999999999999999874
Q ss_pred CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC-------CcchHHHHHhhhhhccCCcchHHHHHH
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-------GFPVINDFNRIICTCFNGASNIAQAGG 166 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~ 166 (272)
+ -+.+... .+--|++.|++|.+|--|.-+|-+++..-.++-. +......+........++...+...+-
T Consensus 189 --p-yl~rP~~-hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r 264 (426)
T COG2873 189 --P-YLCRPIE-HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKAR 264 (426)
T ss_pred --c-eecchhh-cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHH
Confidence 1 1111110 1112999999999987788888877754332111 000011111111111122222222322
Q ss_pred HHhcc--------------cccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 167 LACLS--------------SEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 167 ~~~l~--------------~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
...++ ..+.+.+.-+.++..+|+..+.+.|+.+
T Consensus 265 ~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~H 311 (426)
T COG2873 265 VQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENH 311 (426)
T ss_pred HHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcC
Confidence 22222 2233556667788899999999999986
No 351
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.15 E-value=4.8e-09 Score=93.70 Aligned_cols=236 Identities=13% Similarity=0.073 Sum_probs=133.3
Q ss_pred eeEEeecCCCCCcccC-CCC-C-----CCceEEEEe--cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC-
Q 036024 24 NIEYLECGPGNNFFPD-LKG-T-----SRTDIIFFC--SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD- 93 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~d-l~~-~-----~~~~~i~~~--~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~- 93 (272)
+++.+|.+.++.+.++ +++ . .+++.++++ ..++.||.+-| +++|+++|+++|+++.+|.+|+....-
T Consensus 235 ~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~ 311 (522)
T TIGR03799 235 NLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLS 311 (522)
T ss_pred cEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhC
Confidence 5888999765444444 322 1 345566555 55779999966 999999999999999999999853321
Q ss_pred CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh-----hh-hhccCCcchHHHHHHH
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR-----II-CTCFNGASNIAQAGGL 167 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~a~~ 167 (272)
.....+ +.+...--.+..+.+|.++ ...-+|.++..+....+.+......+.. .. ...-.+-+..+ ..+.
T Consensus 312 ~~~r~~--l~gle~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw 387 (522)
T TIGR03799 312 NTYRHL--LKGIERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVY 387 (522)
T ss_pred HHHHHH--hcCchhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHH
Confidence 111111 1221111267779999664 2244888888654321111110001100 00 00111112222 1234
Q ss_pred HhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCC----------------h-------HH
Q 036024 168 ACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRK----------------S-------WD 223 (272)
Q Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~----------------~-------~~ 223 (272)
..++..+...++++.++..+.++++.+.|++. ++++..+..-..+.+++.... . ..
T Consensus 388 ~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~ 467 (522)
T TIGR03799 388 AGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKF 467 (522)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHH
Confidence 44444455677999999999999999999887 899887655555555642100 0 12
Q ss_pred HHHHHHHhcCeEeeCCCCCC-----CCCCCeEEEEccC---CHHHHHHHHHH
Q 036024 224 VFAEILEKTHITTVPGSGFG-----PGGEEYIRISGFG---HRESILEASRR 267 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~g~~~~-----~~~~~~~R~s~~~---~~~~i~~~l~~ 267 (272)
+..++.++ |.......... ..+...+|+++.+ ++++++.+++.
T Consensus 468 i~~~~~~~-G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 468 IQKRQREA-GKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred HHHHHHhc-CCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 33334444 54443311111 1123569999744 68888888765
No 352
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.14 E-value=2.4e-09 Score=84.78 Aligned_cols=235 Identities=16% Similarity=0.189 Sum_probs=147.0
Q ss_pred cccccCcccchHH--hcccc-eeEEeecCCCCCcccCCCC-----------C-CCceEEEEecCCCccccCCCHHHHHHH
Q 036024 6 SVIVGQAGDLEDE--VGKYC-NIEYLECGPGNNFFPDLKG-----------T-SRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 6 ~~~~~~~~~~~~~--~~~~g-~~~~~~~~~~~~~~~dl~~-----------~-~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
.++++...+|... +.+.| ++..+|-.....+.++++. . .++.+.++++|...-|.+ .+.+++
T Consensus 102 ~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dakkv 178 (382)
T COG1103 102 WVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAKKV 178 (382)
T ss_pred EEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhHHH
Confidence 3455555555543 35577 9999996655555555443 1 457888999998888887 569999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
+++|+++++.+++..+|.- +--+.+..+...+ ++++|-+|+++++ -.+|.+..+.++. +..-+.
T Consensus 179 a~ic~e~gvPlllN~AYt~---Grmpvs~ke~g~D----FiVgSGHKsmAAs-~PiGvl~~~eE~a--------e~V~r~ 242 (382)
T COG1103 179 AKICREYGVPLLLNCAYTV---GRMPVSGKEIGAD----FIVGSGHKSMAAS-APIGVLAMSEEWA--------EIVLRR 242 (382)
T ss_pred HHHHHHcCCceEeecceee---ccccccccccCCC----EEEecCccchhcc-CCeeEEeehhHHH--------HHHHhh
Confidence 9999999999999999975 2224455555322 9999999999754 4799999988883 222111
Q ss_pred h-------h--h---ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEec--CCCceEEEee
Q 036024 151 I-------C--T---CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYG--GINAPYVWAH 215 (272)
Q Consensus 151 ~-------~--~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~--~~~~~~~~i~ 215 (272)
. . . +..+.+.....|. + +....--++++.--+++++|.+.|+++| +.-.+ |.....+.+.
T Consensus 243 Sg~~~~~KEvellGCT~rGapivTlmAS---f--P~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fe 317 (382)
T COG1103 243 SGRAFPKKEVELLGCTVRGAPIVTLMAS---F--PHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFE 317 (382)
T ss_pred cccccccceeeeecccccCchHHHHHhc---C--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeec
Confidence 1 0 0 1222333322222 1 1122224566777788999999999984 65543 2233344444
Q ss_pred cCCC---------ChHHHHHHHHHhcCeE-eeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024 216 FPGR---------KSWDVFAEILEKTHIT-TVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL 271 (272)
Q Consensus 216 l~~~---------~~~~~~~~ll~~~gi~-v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~ 271 (272)
-|.. ..--+..+| ++.||. +.|| ...++.+|.+ .+.|+++..+++++++
T Consensus 318 tp~f~eIakk~~r~gyFlY~EL-K~RgI~GI~~G------~Tk~~K~svyGl~~Eqve~V~~afkeI 377 (382)
T COG1103 318 TPVFHEIAKKHKRKGYFLYEEL-KKRGIHGIQPG------QTKYFKLSVYGLSWEQVEYVVDAFKEI 377 (382)
T ss_pred CchHHHHHHhCcCCceeeHHHH-HhcCccccccC------ceeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 4421 111123334 444653 2333 3678999964 5999999999998875
No 353
>PLN02263 serine decarboxylase
Probab=99.13 E-value=2.5e-08 Score=87.19 Aligned_cols=244 Identities=13% Similarity=0.039 Sum_probs=149.4
Q ss_pred cccccCccc--chHHhcccc-eeEEeecCCCCCcccC-CCC-C----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 6 SVIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 6 ~~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
+++.+...+ ....++-+| +++.+|.++++.+.++ +++ . ..+-+|+.+-.+.++|.+ +++++|.++|++
T Consensus 180 vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~ 256 (470)
T PLN02263 180 ILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEE 256 (470)
T ss_pred EEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHH
Confidence 444454444 557777788 9999999755444443 222 1 123455556789999998 669999999999
Q ss_pred cCC-----EEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 77 NGS-----IIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 77 ~~~-----~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
+|+ ++.+|.+|+++..... ..+.... .....-+.-+.+|.++ ....+|.++..+..+.. +..-.+.+...
T Consensus 257 ~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df--~~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~~~-~~~~~~Yl~~~ 332 (470)
T PLN02263 257 CGFSQDRFYIHCDGALFGLMMPFVKRAPKVTF--KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINV-LSSNVEYLASR 332 (470)
T ss_pred cCCccCCeeEEEeccchhhHhhhcccccccCC--CcCccEEEECCccccC-CCcCEEEEEEehhhHhh-hccChHhhCCC
Confidence 997 9999999987654211 1111111 1111133447799887 55778998888765311 11111222111
Q ss_pred hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHH
Q 036024 151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILE 230 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~ 230 (272)
......+=+......+...++..+.+.+.++.++..++++++.+.|++.|+........+.+.+.-+. + +. ..
T Consensus 333 d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~p~--~-~~----~~ 405 (470)
T PLN02263 333 DATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPK--D-EE----FV 405 (470)
T ss_pred CCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEecCc--h-HH----hh
Confidence 11111111111223344555566678889999999999999999999998887665566666666542 1 11 22
Q ss_pred hcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 231 KTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 231 ~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
+ |..+.+- ...+++.+. .+++.++++++.|++.
T Consensus 406 ~-gW~L~~~-------~~~~Hivvmphv~~~~id~fi~DL~~~ 440 (470)
T PLN02263 406 R-RWQLACQ-------GNIAHVVVMPSVTIEKLDYFLKELVEK 440 (470)
T ss_pred c-ceEEccC-------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3 6666431 235788863 3788899999988764
No 354
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.12 E-value=1.2e-08 Score=96.67 Aligned_cols=239 Identities=11% Similarity=0.044 Sum_probs=142.6
Q ss_pred ccccccc-Ccccc----hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVG-QAGDL----EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~-~~~~~----~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|+|++.. .+|.+ ...++..| +++.++.+... .. ..++-.+++.+| |.+|.+.+ +++|+++|+++
T Consensus 193 ~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~-----~~-~~~v~~vlvq~P-~~~G~v~d---v~~I~~~ah~~ 262 (993)
T PLN02414 193 KKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD-----YS-SGDVCGVLVQYP-ATDGEVLD---YAEFVKNAHAN 262 (993)
T ss_pred CEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc-----cc-cCceEEEEEecC-CCCeEEcC---HHHHHHHHHHc
Confidence 4466644 44443 34445678 88888875421 01 123333443344 46899966 99999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC---CCccceeEEEecccccccCCc-chHHH-------
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG---FTGVRLGWTVVPEELLFSSGF-PVIND------- 146 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g---~~g~r~G~~~~~~~~~~~~~~-~~~~~------- 146 (272)
|+++++ .++.. .... -.++.++..+ |++++..|..+ ..|-+.|++.+++++.+ ..+ +++..
T Consensus 263 GaL~iV-aad~l-al~~-l~~pge~GAD----i~vgsgqKwg~P~G~GGP~aGflavr~~~~r-~~PgriVG~s~d~~g~ 334 (993)
T PLN02414 263 GVKVVM-ATDLL-ALTM-LKPPGEWGAD----IVVGSAQRFGVPMGYGGPHAAFLATSQEYKR-LMPGRIIGVSVDSSGK 334 (993)
T ss_pred CCEEEE-EECHH-HhcC-CCCHhhccCc----EEEECCCccccCCCCCCCCeeEEEECHHHHh-hCCCcccCcccCCCCC
Confidence 999999 44432 1111 1133444322 88999999762 23455899999887743 222 11110
Q ss_pred --H------Hhh-hhhccCCcchHHHHHHHHhcc-----cccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEE
Q 036024 147 --F------NRI-ICTCFNGASNIAQAGGLACLS-----SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYV 212 (272)
Q Consensus 147 --~------~~~-~~~~~~~~~~~~~~a~~~~l~-----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 212 (272)
+ +.. ...-..+++.-+..++.+.+. ..+...+++..++..+++.++++.|...|+++..+.....+
T Consensus 335 ~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~v 414 (993)
T PLN02414 335 PALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTV 414 (993)
T ss_pred cccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeE
Confidence 0 000 000111233323333333332 12224568888999999999999999889888665333345
Q ss_pred EeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024 213 WAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE 269 (272)
Q Consensus 213 ~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~ 269 (272)
.+.++ +..++..+|.++ ||.+.... .+.+|+|+ .+|++||+++++.|.
T Consensus 415 t~~~~--~~~~v~~~L~~~-gI~l~~~~------~~~lrvs~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 415 KVKCS--DADAIADAAAKV-GINLRVVD------ANTVTVSFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred EEecC--CHHHHHHHHHHC-CCeeEEec------CCeEEEEeeccCCHHHHHHHHHHHc
Confidence 55664 456777777655 99775321 35699996 669999999999985
No 355
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.11 E-value=4.2e-08 Score=83.31 Aligned_cols=244 Identities=18% Similarity=0.151 Sum_probs=137.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++++-++. =.......| +.+.+.++++ -+.+|.+. .+++|+|+..+-- |... +.++|.++|++
T Consensus 75 DeVI~ps~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVhl~---G~~~---dm~~i~~la~~ 147 (374)
T COG0399 75 DEVIVPSFTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVHLA---GQPC---DMDAIMALAKR 147 (374)
T ss_pred CEEEecCCchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEehhc---cCCC---CHHHHHHHHHH
Confidence 45555554444 234445567 9999999977 56666433 3779999988552 4443 49999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
||++||+|.+++....-. ...+.++. + +-+.|| .|.++ +| --|.++++++.+ .+..+.++...
T Consensus 148 ~~l~vIEDaAqa~Ga~y~-gk~vGt~G---d--~~~fSF~~~K~it-tg-EGGav~tnd~el-------a~k~~~lr~hG 212 (374)
T COG0399 148 HGLPVIEDAAQAHGATYK-GKKVGSFG---D--IGAFSFHATKNLT-TG-EGGAVVTNDEEL-------AEKARSLRNHG 212 (374)
T ss_pred cCCeEEEEcchhccCeec-Cccccccc---c--eEEEEecCCCCcc-cc-CceEEEeCCHHH-------HHHHHHHHHhC
Confidence 999999999998533221 12233332 1 555566 59997 55 568888888764 33333332111
Q ss_pred c--------------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCc----e-EEEe
Q 036024 155 F--------------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINA----P-YVWA 214 (272)
Q Consensus 155 ~--------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~----~-~~~i 214 (272)
. .........|+....+. +.+++..++=++..+...+.|+++ ++.+.....+ + ...+
T Consensus 213 ~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL---~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i 289 (374)
T COG0399 213 LSRDAVFKYLHEELGYNYRLTEIQAAIGLAQL---ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTI 289 (374)
T ss_pred cCCCccccceeeecccccCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEE
Confidence 1 11222223333333332 333555555566667777777766 3444332222 2 2333
Q ss_pred ecCCC-ChHHHHHHHHHhcCe----EeeCCCCCC--------C-C--------CCCeEEEEcc--CCHHHHHHHHHHHHH
Q 036024 215 HFPGR-KSWDVFAEILEKTHI----TTVPGSGFG--------P-G--------GEEYIRISGF--GHRESILEASRRLEA 270 (272)
Q Consensus 215 ~l~~~-~~~~~~~~ll~~~gi----~v~~g~~~~--------~-~--------~~~~~R~s~~--~~~~~i~~~l~~l~~ 270 (272)
.++.. ...+.+...|++.|| +..|..... + . ....+++-++ .+++++++.++.|++
T Consensus 290 ~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~ 369 (374)
T COG0399 290 LVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKE 369 (374)
T ss_pred EecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 44432 333445555566544 444432220 0 0 1345666653 489999999999987
Q ss_pred hC
Q 036024 271 LF 272 (272)
Q Consensus 271 ~l 272 (272)
++
T Consensus 370 ~~ 371 (374)
T COG0399 370 VL 371 (374)
T ss_pred Hh
Confidence 64
No 356
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.05 E-value=1.9e-08 Score=91.76 Aligned_cols=237 Identities=14% Similarity=0.052 Sum_probs=138.6
Q ss_pred HHhcccc-eeEEeecCCC-CCc----c-----cC-----CCCCCCce---EEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 17 DEVGKYC-NIEYLECGPG-NNF----F-----PD-----LKGTSRTD---IIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~-~~~----~-----~d-----l~~~~~~~---~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
+.+...| ..++++...+ .|+ . ++ +++.++.+ .+++++|+ .-|.+.+ +++|++.|+.+
T Consensus 250 haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~ 325 (714)
T PRK15400 250 HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVK 325 (714)
T ss_pred HHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCC
Confidence 3455566 7788766542 111 1 11 22234444 78888885 6699977 77778888776
Q ss_pred CCEEEEcccCCccc-cCCCCCCcccc-CCC--CCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 78 GSIIIFDSAYAAYV-TDGCPRSIYEI-PGA--REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 78 ~~~vi~D~~~~~~~-~~~~~~~~~~~-~~~--~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+ +++||+|+.+. +.+..++...+ .+. .+.++++.|.+|.++ +=.+.+++...... . .+++......
T Consensus 326 ~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~-alTQaS~LHvkg~v-d------~~~~n~a~~m 395 (714)
T PRK15400 326 S--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA-AFSQASMIHVKGDV-N------EETFNEAYMM 395 (714)
T ss_pred C--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhccc-chhHHhHHHHcCCC-C------HHHHHHHHHH
Confidence 6 78999998543 22221111222 111 245699999999985 33334455443332 1 3566666666
Q ss_pred ccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-C------CeEecCCC-----------------
Q 036024 154 CFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-G------IKVYGGIN----------------- 208 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~~----------------- 208 (272)
..+++++....|++.....-.. ...++..+...+....+++.|.++ + +++..++.
T Consensus 396 ~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whg 475 (714)
T PRK15400 396 HTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHG 475 (714)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccC
Confidence 6666777777666666553222 234667777788888888888765 4 55543220
Q ss_pred ------------ceEEEeecCCC----------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHH
Q 036024 209 ------------APYVWAHFPGR----------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASR 266 (272)
Q Consensus 209 ------------~~~~~i~l~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~ 266 (272)
..=+.+..++. -+...+.+.|+++||.+.-...+ .-.+-+++..++++++++++
T Consensus 476 f~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~----~iLfl~s~g~t~~~~~~L~~ 551 (714)
T PRK15400 476 FKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPY----NLLFLFSIGIDKTKALSLLR 551 (714)
T ss_pred cccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCC----eEEEEeCCCCCHHHHHHHHH
Confidence 00133333321 12344555568889998654422 22445666779999888888
Q ss_pred HHHHh
Q 036024 267 RLEAL 271 (272)
Q Consensus 267 ~l~~~ 271 (272)
+|.++
T Consensus 552 aL~~f 556 (714)
T PRK15400 552 ALTDF 556 (714)
T ss_pred HHHHH
Confidence 87653
No 357
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.02 E-value=1.1e-08 Score=89.93 Aligned_cols=222 Identities=15% Similarity=0.155 Sum_probs=138.4
Q ss_pred ccccCccc--chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCce--EEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 7 VIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTD--IIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 7 ~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~--~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
++.+...+ +...++.+| +...+|+.+. ....|++.+ +++- +|+-+-++.+||.+ +++++|.++|++
T Consensus 160 ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi~~ia~ia~~ 235 (460)
T COG0076 160 IVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDIEELADIAEE 235 (460)
T ss_pred EEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CCHHHHHHHHHH
Confidence 44444444 667888899 9999999886 555663331 2222 37777899999998 679999999999
Q ss_pred cCCEEEEcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHh--hhh
Q 036024 77 NGSIIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNR--IIC 152 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~--~~~ 152 (272)
+++++.+|.+++++...- .+.... ..+.+...-+.-+++|... ...-+||++..++. +.+.+. ....+.. -..
T Consensus 236 ~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~g~-aP~~~G~il~rd~e~l~~~~~-~~~~yl~~~~~~ 312 (460)
T COG0076 236 YGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKYGL-APIGCGVVLFRDEEALRRILI-FADYYLPGGGIP 312 (460)
T ss_pred cCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccccC-CCCCceEEEEECHHHhhhhhh-cccccCCCCCcC
Confidence 999999999999766532 111111 1122222355668999664 55668999998873 221110 0111111 000
Q ss_pred hccCCcchH--HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCCCC--hHHHHHH
Q 036024 153 TCFNGASNI--AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPGRK--SWDVFAE 227 (272)
Q Consensus 153 ~~~~~~~~~--~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~~~--~~~~~~~ 227 (272)
......+.+ ...+....+...+.+.+.++.++..+.++++.+.|++.| +++..+...+.+.++.++.. ..+...+
T Consensus 313 ~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~ 392 (460)
T COG0076 313 NFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSER 392 (460)
T ss_pred ceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHH
Confidence 001111112 222333344445567779999999999999999999996 99988668888888886422 2333333
Q ss_pred HHHhcCeEe
Q 036024 228 ILEKTHITT 236 (272)
Q Consensus 228 ll~~~gi~v 236 (272)
+ ++.|..+
T Consensus 393 ~-~~~gw~v 400 (460)
T COG0076 393 L-DRRGWQV 400 (460)
T ss_pred H-HhcCcee
Confidence 3 3336665
No 358
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.01 E-value=2.9e-08 Score=90.68 Aligned_cols=216 Identities=11% Similarity=-0.021 Sum_probs=127.6
Q ss_pred ceEEEEecCCCccccCCCHHHHHHHHHH-HHHcCCEEEEcccCCccc-cCCC----CCCccccCCCCCceEEEecCcccc
Q 036024 46 TDIIFFCSPNNPTGHAATQNQLEQLVEF-ARNNGSIIIFDSAYAAYV-TDGC----PRSIYEIPGAREVAIEISSFSKFS 119 (272)
Q Consensus 46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~-~~~~~~~vi~D~~~~~~~-~~~~----~~~~~~~~~~~~~~i~~~s~sK~~ 119 (272)
.|++++++|+ .-|.+.+ +++|++. |+.++ .+++||+|+.+. +.+. +....+...+..-++++.|.+|.+
T Consensus 283 ~k~vvit~pT-YdG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL 357 (720)
T PRK13578 283 FRLAVIQLGT-YDGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ 357 (720)
T ss_pred ceEEEEECCC-Ccceeec---HHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc
Confidence 5899999998 4588877 7888887 56677 999999998543 2221 111122222233469999999999
Q ss_pred CCCccceeEEEecccccccCCcch-HHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHH-
Q 036024 120 GFTGVRLGWTVVPEELLFSSGFPV-INDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTL- 196 (272)
Q Consensus 120 g~~g~r~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L- 196 (272)
+ +=.+.+++...+..++.....+ .+++........+++++....|++.....-.. ...++..+...+....+++.|
T Consensus 358 ~-alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~ 436 (720)
T PRK13578 358 A-GFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLIL 436 (720)
T ss_pred h-hhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 5 4344566666554421000000 24566666666666777777777766442222 234666777777777788877
Q ss_pred HhC-CCeEecCC-------------------------------------------CceEEEeecCCCC---h--------
Q 036024 197 ASL-GIKVYGGI-------------------------------------------NAPYVWAHFPGRK---S-------- 221 (272)
Q Consensus 197 ~~~-g~~~~~~~-------------------------------------------~~~~~~i~l~~~~---~-------- 221 (272)
+.. ++++..++ +..=+.+..++.+ +
T Consensus 437 ~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gip 516 (720)
T PRK13578 437 ARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIP 516 (720)
T ss_pred HhCCCeeecccccccccccccCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCcc
Confidence 443 55544210 0001334444433 1
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
...+.+.|+++||.+.-...+ .-.+-+|+..+++++++++++|.++
T Consensus 517 g~~l~~~L~e~gI~~E~~d~~----~vL~l~s~g~t~~~~~~Lv~aL~~f 562 (720)
T PRK13578 517 ATILANYLRENGIVPEKCDLN----SILFLLTPAEDMAKLQQLVAMLARF 562 (720)
T ss_pred HHHHHHHHHHcCCEEEecCCC----eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 244555554449998654433 2345566777999998888888753
No 359
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.01 E-value=1.7e-09 Score=92.97 Aligned_cols=153 Identities=15% Similarity=0.146 Sum_probs=98.5
Q ss_pred CCCceE---EEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc-ccCCCCCCccccCCC---CCceEEEecC
Q 036024 43 TSRTDI---IFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY-VTDGCPRSIYEIPGA---REVAIEISSF 115 (272)
Q Consensus 43 ~~~~~~---i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~---~~~~i~~~s~ 115 (272)
.++.|. +++++|++ -|.+.+ +++|+++|++++..+++||+|+.. .+.+-+.+...+..+ ...++++.|.
T Consensus 163 ~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~ 238 (417)
T PF01276_consen 163 HPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQST 238 (417)
T ss_dssp CTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEH
T ss_pred CccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccccCCCCccchhhccCccccccceeeeech
Confidence 456555 99999984 588866 999999999999999999999843 333222232223211 2357999999
Q ss_pred ccccCCCccceeEEEecccc-cccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHH
Q 036024 116 SKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILI 193 (272)
Q Consensus 116 sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~ 193 (272)
+|.++ +-.+.+++....+. +. .+++.........++++....|......... ....+++.+...++.+.++
T Consensus 239 HKtL~-altQts~lh~~~~~~v~------~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R 311 (417)
T PF01276_consen 239 HKTLP-ALTQTSMLHVKGDRIVD------HERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFR 311 (417)
T ss_dssp HHHSS-S-TT-EEEEEETCCCTT------HHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred hhccc-ccccceEEEecCCCccc------HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99996 44556777777764 32 5666666666655667777777777666444 4555778888888888999
Q ss_pred HHHH---hC-CCeEecC
Q 036024 194 DTLA---SL-GIKVYGG 206 (272)
Q Consensus 194 ~~L~---~~-g~~~~~~ 206 (272)
+.++ +. ++++..+
T Consensus 312 ~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 312 KKINRLNDIWGFKVLGP 328 (417)
T ss_dssp HHHHHHCCT-SSEESS-
T ss_pred HHHHhcCCCceEecCCc
Confidence 9984 33 5665443
No 360
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.00 E-value=9.8e-09 Score=88.45 Aligned_cols=237 Identities=18% Similarity=0.169 Sum_probs=135.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++++-++. ....+...| +++.++++++ .+.+|++. .+++|+|+++|.. |... ++++|.++|++
T Consensus 66 deVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~h~~---G~~~---d~~~i~~~~~~ 138 (363)
T PF01041_consen 66 DEVIVPAYTFPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVVHLF---GNPA---DMDAIRAIARK 138 (363)
T ss_dssp SEEEEESSS-THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE-GG---GB------HHHHHHHHHH
T ss_pred ceEecCCCcchHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEecCC---CCcc---cHHHHHHHHHH
Confidence 56666665555 667888888 9999999977 77778554 2788999998653 4443 59999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+|+++|+|.+++....-. ...+.... + +.+.|| +|.+. .| ..|+++++++.+ .+.+..+....
T Consensus 139 ~~i~lIeD~a~a~g~~~~-g~~~G~~g---d--~~~fSf~~~K~i~-~g-eGG~v~~~~~~~-------~~~~~~~~~~g 203 (363)
T PF01041_consen 139 HGIPLIEDAAQAFGARYK-GRPVGSFG---D--IAIFSFHPTKIIT-TG-EGGAVVTNDPEL-------AERARALRNHG 203 (363)
T ss_dssp TT-EEEEE-TTTTT-EET-TEETTSSS---S--EEEEESSTTSSS--SS-S-EEEEESTHHH-------HHHHHHHTBTT
T ss_pred cCCcEEEccccccCceeC-CEeccCCC---C--ceEecCCCCCCCc-CC-CCeeEEecHHHH-------HHHhhhhhccC
Confidence 999999999998643221 12222221 2 666676 58885 32 248888877663 33333322111
Q ss_pred -----------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-CCCc----e-
Q 036024 155 -----------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG-GINA----P- 210 (272)
Q Consensus 155 -----------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~----~- 210 (272)
....+.+ .|+....+ .+.+++..++-+++.+.+.+.|... ++.... +... +
T Consensus 204 ~~~~~~~~~~~~~~~g~n~rm~~~--~AAigl~Q---L~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~ 278 (363)
T PF01041_consen 204 RSRDAFRRYRHELPPGYNFRMSEL--QAAIGLAQ---LKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYY 278 (363)
T ss_dssp EETSECSTTEESSSS--B-B-BHH--HHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCES
T ss_pred cCccccccccccccCCcccccHHH--HHHHHHHH---HHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccc
Confidence 1112222 22222222 2344666777778888999999887 554432 2221 1
Q ss_pred EEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCC---------------C--------CCeEEEEc--cCCHHHHH
Q 036024 211 YVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPG---------------G--------EEYIRISG--FGHRESIL 262 (272)
Q Consensus 211 ~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~---------------~--------~~~~R~s~--~~~~~~i~ 262 (272)
.+.+.+++. ...++...|.++ ||...+... .+. . ...+.+.+ ..++++++
T Consensus 279 ~f~i~~~~~~~~~rd~l~~~L~~~-GI~~~~~~~-~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~ 356 (363)
T PF01041_consen 279 RFPIRLPDEALADRDELVEALRAR-GIETRPHYP-KPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVD 356 (363)
T ss_dssp SEEEEETCCGCSTHHHHHHHHHHT-TBEEBCSTS-SCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHH
T ss_pred cccccccccccchHHHHHHHHHHC-CCccccccc-CchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHH
Confidence 234445532 445555555555 999987542 110 0 12455554 34788898
Q ss_pred HHHHHHH
Q 036024 263 EASRRLE 269 (272)
Q Consensus 263 ~~l~~l~ 269 (272)
+..+.|+
T Consensus 357 ~I~~~ir 363 (363)
T PF01041_consen 357 YIAEAIR 363 (363)
T ss_dssp HHHHHHH
T ss_pred HHhhccC
Confidence 8888774
No 361
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=98.96 E-value=1.6e-07 Score=82.63 Aligned_cols=231 Identities=15% Similarity=0.101 Sum_probs=125.8
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCcc--c--cCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPT--G--HAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~npt--G--~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
...+..| +++.++.+.... .-|+++ .++++++++.+++||+ | ...+ +++|+++|+++|+++++|...+.
T Consensus 181 ~~~~~~G~~~~~v~~~~~~~-l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~ 256 (454)
T TIGR00474 181 DVMEQSGAKLVEVGTTNRTH-LKDYEDAITENTALLLKVHTSNYRIVGFTEEVS---IAELVALGREHGLPVMEDLGSGS 256 (454)
T ss_pred HHHHHcCCEEEEeCCCCCCC-HHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcc
Confidence 4556678 888887643211 112322 3789999999999995 5 3444 99999999999999999976433
Q ss_pred cccCC-----CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHH
Q 036024 90 YVTDG-----CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA 164 (272)
Q Consensus 90 ~~~~~-----~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (272)
+...+ ..+.+..... .+--++++|.+|.+|.| ..|+++++++++ +.+.+...............
T Consensus 257 l~~~~~~gl~~~p~~~~~~~-~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i--------~~l~~~~l~r~lr~~k~~la 325 (454)
T TIGR00474 257 LVDLSRYGLPDEPTVQEVIA-AGVDLVTFSGDKLLGGP--QAGIIVGKKELI--------ERLKKNPLTRALRVDKLTLA 325 (454)
T ss_pred cccchhccCCCCcccccHhH-cCCCEEEecCccccCCC--eEEEEEECHHHH--------HhhhhchhHHHHhhChHHHH
Confidence 21100 0111111110 11128999999998645 479999988773 22211111000012122222
Q ss_pred HHHHhcc-----------cccHHHHHHHHHHHHHHHHHHHHHHHhC---CC--eEecCC----C---------ceEEEee
Q 036024 165 GGLACLS-----------SEGLEAVHSVVDYYKENTKILIDTLASL---GI--KVYGGI----N---------APYVWAH 215 (272)
Q Consensus 165 a~~~~l~-----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~--~~~~~~----~---------~~~~~i~ 215 (272)
+..+.+. ....+.+....+..++++..+.+.|+.. ++ ++.... + +..+.+.
T Consensus 326 ~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~ 405 (454)
T TIGR00474 326 ALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLT 405 (454)
T ss_pred HHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEe
Confidence 2222221 1122344555567778888888888763 33 332211 1 2223333
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHH
Q 036024 216 FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRL 268 (272)
Q Consensus 216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l 268 (272)
..+....++. +.+++....|..- ...+.+.+.+. ..++|++.++++|
T Consensus 406 ~~~~~~~~l~-~~lr~~~~~ii~r-----~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 406 PDGLSAEKLE-ARLRELPPPIIGR-----IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred cCCCCHHHHH-HHHhcCCCCEEEE-----EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 3343444544 4556655433321 12567777764 3778888877765
No 362
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=98.93 E-value=2e-10 Score=95.15 Aligned_cols=176 Identities=16% Similarity=0.118 Sum_probs=101.5
Q ss_pred cc-eeEEeecCCCCCcccC-CCC--------CCCceEEEEecCCCc-cccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 22 YC-NIEYLECGPGNNFFPD-LKG--------TSRTDIIFFCSPNNP-TGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 22 ~g-~~~~~~~~~~~~~~~d-l~~--------~~~~~~i~~~~p~np-tG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
.| ++++++.+.++.+.++ ++. .+++++|++++|+|. -|++++.+++++|.++|+++|+.++.|.+.-+-
T Consensus 91 ~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~ 170 (290)
T PF01212_consen 91 SGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLAN 170 (290)
T ss_dssp TTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHH
T ss_pred cCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHH
Confidence 56 8888888764455554 222 257899999999876 488999999999999999999999999997543
Q ss_pred ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH-----HH
Q 036024 91 VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ-----AG 165 (272)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~a 165 (272)
.......++.++....| ++..|++|.+|+++ -+.++.+++++.. ...+.+...........+.. .+
T Consensus 171 a~~~~~~~~~e~~~~~D--~v~~~~tK~~g~~~--Gavl~~~~~~i~~-----~~~~~k~~gg~~~~~G~~~a~~~~~~~ 241 (290)
T PF01212_consen 171 AAAALGVSLAEIAAGAD--SVSFGGTKNGGAPG--GAVLAGNKEFIAK-----ARRQRKRLGGGMRQAGVLAAAELYQFA 241 (290)
T ss_dssp HHCHHHHHHHHHHTTSS--EEEEETTSTT-SSS--EEEEEESHHHHHH-----HHHHHHHHTHHHHHTTHHHHHHHHHHH
T ss_pred hhhcccccHHHHhhhCC--EEEEEEEccccccc--ceEEEechHHHHH-----HHHHHHHhccCeeecceeeeechhhHH
Confidence 32211234444432333 55668999998765 2455566665321 11111111111100111211 12
Q ss_pred HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceE
Q 036024 166 GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPY 211 (272)
Q Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 211 (272)
+...++ .. .....+-.++.+.+.+.|+.+|..+..+..++.
T Consensus 242 ~l~~l~-~~----~~~~~~~~~~A~~La~~l~~~~~~~~~~~~tn~ 282 (290)
T PF01212_consen 242 ALRALE-LW----LERARHANAMAKRLAAGLEALGGVLPRPVETNQ 282 (290)
T ss_dssp HHCHEE-CS----HHHHHCHHHHHHCHHHCHHEECEEEETTSS-HH
T ss_pred HHHHHH-hh----HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCcE
Confidence 222222 11 445577778899999999998877766655443
No 363
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.90 E-value=4.9e-09 Score=89.29 Aligned_cols=140 Identities=18% Similarity=0.202 Sum_probs=90.8
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.++++-.-+...|.. ++++.+++|.++|+++|+++|.||++.++...+.........-.+|. + +++|.++ .
T Consensus 176 ~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDi--v--~~gK~l~-g 250 (339)
T PF00202_consen 176 DEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDI--V--TFGKGLG-G 250 (339)
T ss_dssp GGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSE--E--EEEGGGG-T
T ss_pred CcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcc--c--ccccchh-h
Confidence 556666665445555654 45677999999999999999999999987655544433444444553 2 3579998 7
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
|+.+|.++.+++. .+.+......++.+.++++..++.+.++.... +...++.+++.++|++.|+++
T Consensus 251 G~p~sav~~~~~i--------~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~---~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 251 GLPISAVLGSEEI--------MEAFQPGSHGSTFGGNPLSCAAALATLEILEE---EDLLERVRELGERLREGLREL 316 (339)
T ss_dssp TSSEEEEEEEHHH--------HTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccccchh--------hccccccccccccccchHhhhhhhhHHHhhcc---HHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999988 33333333445555788888888888873222 224445555555555555543
No 364
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.89 E-value=3.1e-07 Score=75.93 Aligned_cols=234 Identities=17% Similarity=0.124 Sum_probs=147.2
Q ss_pred EEeecCCCCCc-ccC-CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCCCCc
Q 036024 26 EYLECGPGNNF-FPD-LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCPRSI 99 (272)
Q Consensus 26 ~~~~~~~~~~~-~~d-l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~~~~ 99 (272)
.|+.+++..|+ +.| +++ +=++|+|+.=...++ ..++ -.++.++|.+.+++++.|.+|. +++..+.-++.
T Consensus 165 mPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~--R~~D---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsP 239 (477)
T KOG2467|consen 165 MPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSAYS--RLID---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSP 239 (477)
T ss_pred CceeeCCCCCceehHHHHHHHHhcCCcEEEeccccch--hhcc---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCc
Confidence 46666666453 333 443 246777776433333 2333 5677778888999999999995 66666655555
Q ss_pred cccCCCCCceEEEecCccccCCCccceeEEEecccccccC-------CcchHHHHHhhh-hhccCCcchHHHHHHHHhcc
Q 036024 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-------GFPVINDFNRII-CTCFNGASNIAQAGGLACLS 171 (272)
Q Consensus 100 ~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~ 171 (272)
.+.- | |+..+-+|.+ .|-|-|.+.-..-..... .-.+.+.+.... .....++....+.+++-+|.
T Consensus 240 Fey~---D--iVTTTTHKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALk 312 (477)
T KOG2467|consen 240 FEYC---D--IVTTTTHKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALK 312 (477)
T ss_pred cccc---c--eeeccccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHH
Confidence 5542 2 8888999987 566667766544332111 111222333222 22233455555565666665
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCC---CC
Q 036024 172 SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGP---GG 246 (272)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~ 246 (272)
....-..++..+++.+|.+.|.+.|.+.|.++... .+...+.+++. ...+...++..++..+|.++--..++. -.
T Consensus 313 Qa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~ 392 (477)
T KOG2467|consen 313 QAMTPEFKEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALS 392 (477)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccC
Confidence 44445558889999999999999999999998653 34556777886 223456678888888998865554542 23
Q ss_pred CCeEEEEc-c-C----CHHHHHHHHHHHHHh
Q 036024 247 EEYIRISG-F-G----HRESILEASRRLEAL 271 (272)
Q Consensus 247 ~~~~R~s~-~-~----~~~~i~~~l~~l~~~ 271 (272)
++.+|++. . + .++||.+..+-|.++
T Consensus 393 PgGiRiGtPAmTsRG~~e~df~~v~~fi~~a 423 (477)
T KOG2467|consen 393 PGGIRIGTPAMTSRGFGEEDFEKVADFIDRA 423 (477)
T ss_pred CCceeccchhhcccCccHHHHHHHHHHHHHH
Confidence 78899983 1 1 377887777766554
No 365
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.88 E-value=5.5e-08 Score=81.41 Aligned_cols=142 Identities=18% Similarity=0.171 Sum_probs=100.6
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
.+.++++---+...|..+ +++.+..|...|+++++++|.||++.++..-+.......+...+| +.++.|.+| .|
T Consensus 206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD----I~t~aK~L~-gG 280 (433)
T KOG1401|consen 206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD----ITTVAKPLG-GG 280 (433)
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc----ceeehhhcc-CC
Confidence 466666665577777654 567799999999999999999999998765554332222333445 337899998 99
Q ss_pred cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
+.+|+.+++++. .+.+.. +....+++.++++..++...+..... +++++..++-++.++.+.+.+...
T Consensus 281 lPigA~~v~~kV--------~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~ 352 (433)
T KOG1401|consen 281 LPIGATGVRDKV--------AEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKT 352 (433)
T ss_pred ceeEEEeehHHH--------HhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999988 344432 33467777888998888888874333 555666666666666666666654
No 366
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.88 E-value=4.7e-07 Score=82.86 Aligned_cols=206 Identities=12% Similarity=0.056 Sum_probs=122.6
Q ss_pred ceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE-EEcccCCccc-cCCCCCCccccC---CCCCceEEEecCccccC
Q 036024 46 TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII-IFDSAYAAYV-TDGCPRSIYEIP---GAREVAIEISSFSKFSG 120 (272)
Q Consensus 46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v-i~D~~~~~~~-~~~~~~~~~~~~---~~~~~~i~~~s~sK~~g 120 (272)
++++++++|+ .-|.+.+ +++|++.| ++.+ ++||+|+.+. +.+...+...+. +.+..++++.|.+|.++
T Consensus 298 p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~ 370 (713)
T PRK15399 298 PVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLA 370 (713)
T ss_pred ceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhcccc
Confidence 3688888885 6699987 66666666 5655 6999998543 222111112221 22233577999999995
Q ss_pred CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 121 ~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
+=.+.+++...... . .+++........+++++....|++.....-.. ...++..+...+....+++.+...
T Consensus 371 -alTQaS~iHvk~~v-d------~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~ 442 (713)
T PRK15399 371 -AFSQASLIHIKGEY-D------EETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRL 442 (713)
T ss_pred -ccchheeeeecCCC-C------HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 43445666665432 1 35666666666666777777766666653332 234666777777777788877664
Q ss_pred -C------CeEecCC-----------------------------CceEEEeecC-----------CCChHHHHHHHHHhc
Q 036024 200 -G------IKVYGGI-----------------------------NAPYVWAHFP-----------GRKSWDVFAEILEKT 232 (272)
Q Consensus 200 -g------~~~~~~~-----------------------------~~~~~~i~l~-----------~~~~~~~~~~ll~~~ 232 (272)
+ +++..++ +..=+.+..+ +... ..+.+.|+++
T Consensus 443 ~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g-~~l~~~L~e~ 521 (713)
T PRK15399 443 REESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPA-ALVAKFLDER 521 (713)
T ss_pred cccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccCCCCH-HHHHHHHHHc
Confidence 2 3444321 0011334333 2233 3455556777
Q ss_pred CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
||.+.-...+ .-.+-+++..++++++++++.|.++
T Consensus 522 gI~~E~~d~~----~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 522 GIVVEKTGPY----NLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred CCEEEecCCC----eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9998654432 2344566677999998888887653
No 367
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.88 E-value=3.1e-07 Score=86.30 Aligned_cols=226 Identities=12% Similarity=0.074 Sum_probs=133.0
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC 95 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~ 95 (272)
..++..| +++.++++ +++..-++.++++.+|| -.|.+. ++++|++++++.|++++++ +.- ..-..
T Consensus 172 t~a~~~g~~v~~~~~~-------~l~~~~~~~~v~~q~Pn-~~G~ie---d~~~i~~~~h~~gal~~~~-ad~--~al~l 237 (939)
T TIGR00461 172 TRAKPFGIEVIVVDCS-------DIKKAVDVFGCLLQYPA-TDGSIL---DYKQLIDALHSHKSLVSVA-ADL--MALTL 237 (939)
T ss_pred HHHHhcCcEEEEEcHH-------HHhhcCCEEEEEEECCC-CCeEEe---cHHHHHHHHHHcCCEEEEE-ech--HHhCC
Confidence 3456778 88887653 23322256677777886 678874 6999999999999999984 221 11111
Q ss_pred CCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcch-------------------HH-HHHhhh
Q 036024 96 PRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPV-------------------IN-DFNRII 151 (272)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~-------------------~~-~~~~~~ 151 (272)
..++.++..+ |++++ +|.||.| |--.|++.+++++.+..=-++ .+ .+++.+
T Consensus 238 l~~Pge~GaD----i~vg~-~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRek 312 (939)
T TIGR00461 238 LTPPGHYGAD----IVLGS-SQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDK 312 (939)
T ss_pred cCCHHHcCCc----EEeeC-CCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccc
Confidence 2233333221 55655 4445432 444677777666542100000 00 111111
Q ss_pred hhccCCcchHHHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024 152 CTCFNGASNIAQAGGLAC--LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL 229 (272)
Q Consensus 152 ~~~~~~~~~~~~~a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll 229 (272)
.++.. +..-+..|..+. +...+.+.++++.++...++.++.+.|.+.|+++..+.--.-+.+.++..+..++..+++
T Consensus 313 AtSNI-Ct~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~fF~~~~v~~~~~~~~~i~~~~~ 391 (939)
T TIGR00461 313 ATSNI-CTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINKTWFDTLTVKVGNGISSELLKAAE 391 (939)
T ss_pred cCcch-hHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCccceEEEEeCCCCHHHHHHHHH
Confidence 11111 111222221112 233455778899999999999999999999998877522122445554345667777776
Q ss_pred HhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024 230 EKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE 269 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~ 269 (272)
++ ||.+... ..+.+++|+ .+|++|++.+++.+.
T Consensus 392 ~~-gi~l~~~------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 392 EF-NINLRAV------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred HC-CCeeeec------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 66 9997542 245789997 568999999999884
No 368
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.87 E-value=3.7e-07 Score=78.77 Aligned_cols=227 Identities=16% Similarity=0.161 Sum_probs=118.1
Q ss_pred Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC
Q 036024 18 EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP 96 (272)
Q Consensus 18 ~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~ 96 (272)
.+...| +++.++.+++ +... .+++.++++.+|| -.|.+ +++++|.++++++|+++++ .+.- ... +.-
T Consensus 174 ~a~~~g~~iv~~~~~~~-~~~d----~~~~a~v~vq~Pn-~~G~~---ed~~~i~~~~h~~gal~~~-~ad~-~aL-~~l 241 (429)
T PF02347_consen 174 YAAPLGIEIVEVPLDED-GTTD----DDDTAAVMVQNPN-TFGVF---EDIKEIADIAHAAGALVIV-GADP-NAL-GGL 241 (429)
T ss_dssp HCCHCCEEEEEE-BBTT-CSB-----STTEEEEEEESS--TTSB-----THHHHHHHHHHTT-EEEE-CGGC-CGC-CTC
T ss_pred hhhhCCeEEEEeccccc-CCcc----ccCeEEEEeecCC-CCceE---eeHHHHHHHHHHcCCEEEE-ecCH-HHH-hCc
Confidence 556678 9999998765 3332 4789999999998 56877 4499999999999999887 3321 111 213
Q ss_pred CCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccC------------Ccc-----h--HH-HHHhhhh
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSS------------GFP-----V--IN-DFNRIIC 152 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~------------~~~-----~--~~-~~~~~~~ 152 (272)
.++.++..+ |++++ +|.||.| |--.|++.+.+++++.. .++ + .+ .+++.+.
T Consensus 242 ~~Pge~GAD----I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKA 316 (429)
T PF02347_consen 242 KSPGEYGAD----IVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKA 316 (429)
T ss_dssp --GGGGT-S----EEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCS
T ss_pred CChhhcCcc----EEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccch
Confidence 334444322 66877 8887744 55588998888875311 000 0 00 1122222
Q ss_pred hccCCcchHHH-HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHH
Q 036024 153 TCFNGASNIAQ-AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILE 230 (272)
Q Consensus 153 ~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~ 230 (272)
++...++.... .++...+...+.+.+++..++...++.++.+.|++. +..+..+.---++....+. ....++++
T Consensus 317 tSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~----~~~~~l~~ 392 (429)
T PF02347_consen 317 TSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD----KEVEELLK 392 (429)
T ss_dssp TT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-----HHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc----HHHHHHHH
Confidence 33322222222 223333444666888999999999999999999997 4333332112234333332 22333554
Q ss_pred hcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHH
Q 036024 231 KTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRL 268 (272)
Q Consensus 231 ~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l 268 (272)
+ ++.-. ..+.....+.+-+++. .+++|++++++.|
T Consensus 393 ~-~~~~g--l~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 393 R-GIEGG--LNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp T-T------EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred H-HHhcC--CCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 4 44331 1112222447778873 3789999988764
No 369
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=6.5e-08 Score=80.45 Aligned_cols=210 Identities=13% Similarity=0.105 Sum_probs=134.7
Q ss_pred eEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCC--CceEEEecCccccCCCc
Q 036024 47 DIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAR--EVAIEISSFSKFSGFTG 123 (272)
Q Consensus 47 ~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~g~~g 123 (272)
+-.++. .---+||...+ +.+|+++..+|...+|+||.++....+..+..+.+..+.+ +.-++++|++-+++..|
T Consensus 234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G 310 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG 310 (467)
T ss_pred eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence 444444 44567899888 9999999999999999999999766665455554443332 44488999999997555
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK 202 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 202 (272)
|+.++..-... ..++.....-.+...++....|+...+.. .++..++.+.+++....+.+.|+.. ++.
T Consensus 311 ---gFc~G~~~i~~------hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~~ 379 (467)
T KOG1358|consen 311 ---GFCAGKSFIAD------HQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGFI 379 (467)
T ss_pred ---ceeecceeeEe------eeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCceE
Confidence 77777443321 12222222212222333333334443331 2333668888999999999999987 788
Q ss_pred EecCCCceEEEeecCC-----CCh----HHHHHHHHHhcCeEeeCCCCCC----CCCCCeEEEEcc--CCHHHHHHHHHH
Q 036024 203 VYGGINAPYVWAHFPG-----RKS----WDVFAEILEKTHITTVPGSGFG----PGGEEYIRISGF--GHRESILEASRR 267 (272)
Q Consensus 203 ~~~~~~~~~~~i~l~~-----~~~----~~~~~~ll~~~gi~v~~g~~~~----~~~~~~~R~s~~--~~~~~i~~~l~~ 267 (272)
+.+...++.+.+.+.. .+. ++++...+.+ |+.+.-...-- ..-+..+|+++. .++||++++...
T Consensus 380 v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ 458 (467)
T KOG1358|consen 380 VSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAEL 458 (467)
T ss_pred EecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHH
Confidence 9888788888888863 122 2344555555 77775332221 011457999974 389999999998
Q ss_pred HHHh
Q 036024 268 LEAL 271 (272)
Q Consensus 268 l~~~ 271 (272)
+++.
T Consensus 459 ik~~ 462 (467)
T KOG1358|consen 459 IKEV 462 (467)
T ss_pred HHHH
Confidence 8764
No 370
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.81 E-value=8.1e-07 Score=75.71 Aligned_cols=221 Identities=15% Similarity=0.157 Sum_probs=133.9
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH-cCCEEEEcccC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN-NGSIIIFDSAY 87 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~~vi~D~~~ 87 (272)
|....+..+ ++..+|+++. .+..|+.+ .+++.+++.+-|+.|+|.. +++++|.++..+ +++.+.+|.+-
T Consensus 183 ~eK~a~yf~v~l~~V~~~~~-~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~ 258 (491)
T KOG1383|consen 183 FEKAARYFEVELREVPLDEG-DYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACL 258 (491)
T ss_pred HHHHHhhEEEEEEeeecccc-ceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccC
Confidence 556666677 8999999874 88888665 3788999999999999988 789999999988 99999999999
Q ss_pred CccccCCCCCCccccC-CCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHhhhhhccCCcchHHHHH
Q 036024 88 AAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRIICTCFNGASNIAQAG 165 (272)
Q Consensus 88 ~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 165 (272)
+.|...-.......++ +.+...-.-.+-+| +|+.---+||++=++.. ...++....+.......+.+...|..+..+
T Consensus 259 GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~v 337 (491)
T KOG1383|consen 259 GGFINPAGYLNEEEFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQV 337 (491)
T ss_pred ccccccccccCccccccCCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHH
Confidence 9887641111221221 11111112223356 44332236886654433 222222223333333333222223233222
Q ss_pred HHHhcc--cccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCC
Q 036024 166 GLACLS--SEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGF 242 (272)
Q Consensus 166 ~~~~l~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~ 242 (272)
+..+.. ..+++...+..+++.+..+.+++.+++. ++.+.+...-.++...-...+.-++ ..++++.|--+. +..+
T Consensus 338 a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~el-sd~l~~~GW~ln-alq~ 415 (491)
T KOG1383|consen 338 AAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFEL-SDLLRKKGWILN-ALQF 415 (491)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhh-hHHHHhcCcCcc-ccCC
Confidence 332222 3556777888999999999999999998 8888886443333333334344444 445566587774 4433
No 371
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.78 E-value=9.4e-07 Score=72.14 Aligned_cols=209 Identities=13% Similarity=0.120 Sum_probs=132.3
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~ 122 (272)
.++.++++++.|+-||+.++ +.+|-+++++++++++.|=+|+-... +..+..... -+-+++--|-+. -|
T Consensus 165 dd~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav---p~~Lh~~ga----DfaigcsyKYLNgGP 234 (407)
T COG3844 165 DDVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV---PVDLHAAGA----DFAIGCSYKYLNGGP 234 (407)
T ss_pred cceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc---ceeecccCC----CeeeeeeceeccCCC
Confidence 67889999999999999987 89999999999999999999985221 223333322 267777778663 25
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhh---------------hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHH
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRII---------------CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKE 187 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 187 (272)
|. .+++.+.+...+.....+..-|.... .....+.+..+..++...|.....-.+.+.|++--.
T Consensus 235 Ga-pa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSla 313 (407)
T COG3844 235 GA-PAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLA 313 (407)
T ss_pred CC-ceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhH
Confidence 43 44555555543333332222221111 111122344444444444442223347889999999
Q ss_pred HHHHHHHHHHhC----CCeEecCCC----ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cC
Q 036024 188 NTKILIDTLASL----GIKVYGGIN----APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FG 256 (272)
Q Consensus 188 ~~~~l~~~L~~~----g~~~~~~~~----~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~ 256 (272)
..++|.+.++.. ++++..|.+ |..+.+..+ ...+....|.++ ||..- ...++.+||.+ ++
T Consensus 314 LTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--~~~~V~qaLi~r-GVigD------~R~P~vlRfgftPlY~ 384 (407)
T COG3844 314 LTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--HGYQVMQALIDR-GVIGD------FREPDVLRFGFTPLYV 384 (407)
T ss_pred HHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC--cHHHHHHHHHHc-Ccccc------ccCCCeeeecCcccee
Confidence 999999999875 677766543 667777776 344555555555 98642 22367899995 56
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
+-+|+=.+++.|.++|
T Consensus 385 ~~~DVw~AV~~L~evL 400 (407)
T COG3844 385 SFVDVWDAVDALEEVL 400 (407)
T ss_pred chhHHHHHHHHHHHHH
Confidence 7778777777776653
No 372
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.67 E-value=3.3e-07 Score=79.00 Aligned_cols=203 Identities=13% Similarity=0.091 Sum_probs=117.1
Q ss_pred cccccCccc--chHHhcccc-eeEEeecCCCCCcccC-CCCC-------CCce-EEEEecCCCccccCCCHHHHHHHHHH
Q 036024 6 SVIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT-------SRTD-IIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 6 ~~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~-------~~~~-~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
+++.+...+ ....+.-+| .++.+|.++++.+.++ +++. ..+- +|+.+..+..||.+ +++++|.++
T Consensus 143 ~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~---D~l~~i~~i 219 (373)
T PF00282_consen 143 VIYVSEQAHYSIEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI---DPLEEIADI 219 (373)
T ss_dssp EEEEETTS-THHHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB----SHHHHHHH
T ss_pred ccccccccccHHHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccc---cCHHHHhhh
Confidence 344444344 557778889 9999999985444444 3321 1222 45556779999998 779999999
Q ss_pred HHHcCCEEEEcccCCcccc-CCCCCC-ccccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHhh
Q 036024 74 ARNNGSIIIFDSAYAAYVT-DGCPRS-IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNRI 150 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~-~~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~~ 150 (272)
|+++++++.+|.+|++... .+.... ...+ +.-.-+.-+++|.++ ....+|+++..+... ......-.+.+...
T Consensus 220 ~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi---~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~ 295 (373)
T PF00282_consen 220 CEKYNIWLHVDAAYGGSALLSPEYRHLLFGI---ERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGND 295 (373)
T ss_dssp HHHCT-EEEEEETTGGGGGGHCTTGGGGTTG---GGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S
T ss_pred ccccceeeeeccccccccccccccccccccc---ccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhccc
Confidence 9999999999999997222 121111 2222 211133447899998 446789988877652 11110000111100
Q ss_pred ---------hhhccCCcchHHHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeec
Q 036024 151 ---------ICTCFNGASNIAQAGGLA--CLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHF 216 (272)
Q Consensus 151 ---------~~~~~~~~~~~~~~a~~~--~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l 216 (272)
....+...+. ...++.. .++..+.+.+.++.++..+.++++.+.|++. ++++..+.....+.+++
T Consensus 296 ~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 296 DRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp -SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred ccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 0011111222 3333333 3334555778999999999999999999998 68887766666666554
No 373
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.65 E-value=1.8e-06 Score=74.50 Aligned_cols=203 Identities=15% Similarity=0.134 Sum_probs=124.1
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc-cc-------CCCCCCcccc----CCCCCceEEEecCccccCCC
Q 036024 55 NNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY-VT-------DGCPRSIYEI----PGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 55 ~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~-~~-------~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~ 122 (272)
|.--|+.+|.+.++++.++|++||+.++.|.+-.+- .+ .-...++.++ ....| .+..|+||.+|+|
T Consensus 194 N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD--svt~slsKglgAp 271 (467)
T TIGR02617 194 NSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD--MLAMSAKKDAMVP 271 (467)
T ss_pred ecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC--EEEEEcCCCCCCc
Confidence 444688999999999999999999999999876531 21 1113444433 12233 5566899999977
Q ss_pred -ccceeEEEecccccccCCcchHHHHHhhh-----hhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHH
Q 036024 123 -GVRLGWTVVPEELLFSSGFPVINDFNRII-----CTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDT 195 (272)
Q Consensus 123 -g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~ 195 (272)
| |+++++++.+.+ +........ ..+..+.+.--..|++.-|.+... +++..+ -...++|.+.
T Consensus 272 vG---g~Lag~d~~~~~----l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~r----i~qv~yl~~~ 340 (467)
T TIGR02617 272 MG---GLLCFKDDSFFD----VYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYR----INQVQYLVNG 340 (467)
T ss_pred cc---ceEEecchhHHH----HHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHH----HHHHHHHHHH
Confidence 5 677777762100 111211111 122334555555555545553322 333333 3445788899
Q ss_pred HHhCCCeEecCCCceEEEeec----C-----CCChHHHHHHHHHhcCeEeeCCCCCC----CC-------CCCeEEEEcc
Q 036024 196 LASLGIKVYGGINAPYVWAHF----P-----GRKSWDVFAEILEKTHITTVPGSGFG----PG-------GEEYIRISGF 255 (272)
Q Consensus 196 L~~~g~~~~~~~~~~~~~i~l----~-----~~~~~~~~~~ll~~~gi~v~~g~~~~----~~-------~~~~~R~s~~ 255 (272)
|.+.|+.+.. .+|..++++- | .-....+..+|-.+.||...--..+. +. .-..+|+++-
T Consensus 341 L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~Rlaip 419 (467)
T TIGR02617 341 LEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIP 419 (467)
T ss_pred HHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccc
Confidence 9999998887 6888887753 2 23455677888888888743322221 11 1367999972
Q ss_pred ---CCHHHHHHHHHHHHHh
Q 036024 256 ---GHRESILEASRRLEAL 271 (272)
Q Consensus 256 ---~~~~~i~~~l~~l~~~ 271 (272)
-|.++++...+++..+
T Consensus 420 Rrvyt~~h~d~v~~~~~~~ 438 (467)
T TIGR02617 420 RATYTQTHMDFIIEAFKHV 438 (467)
T ss_pred cccccHhHHHHHHHHHHHH
Confidence 2778888887777653
No 374
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.60 E-value=1.3e-05 Score=68.09 Aligned_cols=254 Identities=13% Similarity=0.092 Sum_probs=149.0
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
.|+|++.-.+ ....++..| ++|+++.++++..++| ++. .+++.+++++||| -.|. -.+++.+|+++.+++|.
T Consensus 159 ~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPs-T~Gv--FE~~I~ei~~ivH~~Gg 235 (496)
T COG1003 159 ICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPS-TLGV--FEEDIREICEIVHEAGG 235 (496)
T ss_pred EEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCc-cccc--chhhHHHHHHHHHHcCC
Confidence 3444444333 667778889 9999999988777666 333 3788899998887 3453 45889999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcch-----HHHHH--
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPV-----INDFN-- 148 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~-----~~~~~-- 148 (272)
.++.|.+.-.-..+- .....+. -. |+=--++|+|+.| |--+|=+.+...+.. .++.- ...+.
T Consensus 236 ~vY~DGANlNA~vG~--~rPGd~G---~D-V~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~p-fLP~p~~~~~~~~y~~~ 308 (496)
T COG1003 236 QVYYDGANLNAIVGL--ARPGDMG---FD-VVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAP-FLPGPVVYHDVGEYRLD 308 (496)
T ss_pred EEEecCcchhhhhcc--ccccccc---cc-eEEeecccccccCCCCCCCCCCceehHhhccc-cCCCCcccCCCcccccc
Confidence 999999986433221 1111221 11 3333468887533 333565665544421 11110 00000
Q ss_pred --h----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCce-EEEeecC---
Q 036024 149 --R----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAP-YVWAHFP--- 217 (272)
Q Consensus 149 --~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~i~l~--- 217 (272)
. .+...++ .+......+...+..-+.+.+++.-+.---+++++.+.|+.. .+.+.+..... =+.+...
T Consensus 309 ~~~~~s~g~~~a~~-Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~ 387 (496)
T COG1003 309 YDGKKSIGVSAAPY-GSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLK 387 (496)
T ss_pred CCCCccceeecccc-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEeechHhH
Confidence 0 0111222 233333334444454555666777777777889999999973 22222211111 1334443
Q ss_pred ---CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 218 ---GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 218 ---~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+....++.++|++- |+.. |--+|...-.+.+-+=. +.+++++|++++++.++
T Consensus 388 ~~~Gv~~~DvAKrLlD~-GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I 444 (496)
T COG1003 388 KETGVRALDVAKRLLDY-GFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAI 444 (496)
T ss_pred hhcCCcHHHHHHHHHhc-CCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHH
Confidence 56788899998866 9876 44445422245555543 34688999999888764
No 375
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.47 E-value=2e-06 Score=71.63 Aligned_cols=185 Identities=12% Similarity=0.136 Sum_probs=104.6
Q ss_pred hHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHc--CCEEEEcccCC
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNN--GSIIIFDSAYA 88 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~--~~~vi~D~~~~ 88 (272)
.+.++.+| ....+++.+++.+..| +++ .+++|++++. +-.+.+=-.++.+++++++++.++. ++++++|.+|+
T Consensus 121 ~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG 200 (403)
T PF06838_consen 121 PGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYG 200 (403)
T ss_dssp SSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTT
T ss_pred CCChHHhCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 34567889 9999999988777666 332 2789999998 6666677778999999999999775 89999999999
Q ss_pred ccccCCCCCCccccCCCCCceEEEecCccccCCCcc--ceeEEEecccccccCCcchHHHHHhhhhhccCC-cchHHHHH
Q 036024 89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV--RLGWTVVPEELLFSSGFPVINDFNRIICTCFNG-ASNIAQAG 165 (272)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~--r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a 165 (272)
.|+-...|.. ...+ ++.||+-|+.| .|+ --||+++..++ ++...........+ --..+..-
T Consensus 201 EFvE~~EP~~---vGAD----l~aGSLIKNpG-GgiAptGGYIaGr~~l--------Ve~~a~RLTaPGiG~e~G~t~~~ 264 (403)
T PF06838_consen 201 EFVETQEPTE---VGAD----LMAGSLIKNPG-GGIAPTGGYIAGRKDL--------VERAAYRLTAPGIGKEVGATLGT 264 (403)
T ss_dssp TTTSSS-GGG---GT-S----EEEEETTSGGG-TTT-SS-EEEEESHHH--------HHHHHHHHS-TTTGGGSS--TTT
T ss_pred eeccccCccc---cchh----heeccceeCCC-CCccCcCCEEechHHH--------HHHHHhhhcCCccccccccCcch
Confidence 9875543332 2112 99999999887 322 24999999998 44444333211110 00000000
Q ss_pred HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----CceEEEeecCC
Q 036024 166 GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAPYVWAHFPG 218 (272)
Q Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~i~l~~ 218 (272)
...+++ .. -....+...--+-+......++++|+++.+.. .-.+..+.+..
T Consensus 265 ~R~~~Q-Gl-FlAP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~~ 319 (403)
T PF06838_consen 265 NRLMFQ-GL-FLAPHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELGS 319 (403)
T ss_dssp HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-SS
T ss_pred HHHHHh-HH-hhchHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECCC
Confidence 111111 11 11234444444555666667788899987743 23567777763
No 376
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.30 E-value=3.7e-05 Score=62.32 Aligned_cols=200 Identities=15% Similarity=0.160 Sum_probs=124.1
Q ss_pred cCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe
Q 036024 53 SPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV 131 (272)
Q Consensus 53 ~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~ 131 (272)
+-+.-.|+++|+.. .+++++..+.+|.+.|.||+..+|..-|......+. ++.+--+-++.|-+| .|..++.++.
T Consensus 217 slQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~---y~fiPDIVtmgKpmG-NGhPVa~Vat 292 (452)
T KOG1403|consen 217 SLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQT---YNFIPDIVTMGKPMG-NGHPVAAVAT 292 (452)
T ss_pred HHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhh---hccccchheecccCC-CCCeeeEEec
Confidence 55778899888776 699999999999999999999876655443222222 122223347899999 9999999888
Q ss_pred cccccccCCcchHHHHHh--hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCC
Q 036024 132 PEELLFSSGFPVINDFNR--IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGI 207 (272)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~ 207 (272)
.++. ...+.. .....+++.++.+.++..+++..-.. +.+.++-++.-+.+...|.++ -.++.+.-
T Consensus 293 tkeI--------A~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~---E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv 361 (452)
T KOG1403|consen 293 TKEI--------AQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCED---ENLQEHAQQVGEKLEVLLRRLKQKHECIGDV 361 (452)
T ss_pred cHHH--------HHHhccccceehhccCCCchhHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHhhhccceecc
Confidence 8877 444433 22445667888888888888874333 334444444455555555544 23344432
Q ss_pred --CceEEEeecCC---------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024 208 --NAPYVWAHFPG---------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL 271 (272)
Q Consensus 208 --~~~~~~i~l~~---------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~ 271 (272)
-|.|+-+++-. ........+|-+.++|.+..-. | ..+.+.|- ++-++++.++.+..|+++
T Consensus 362 RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG---P-h~NilKiKPPmCFneena~e~v~~ld~i 434 (452)
T KOG1403|consen 362 RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG---P-HRNILKIKPPMCFNEENADEFVLGLDEI 434 (452)
T ss_pred ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCC---C-CCceeecCCCcccChhhHHHHHHHHHHH
Confidence 36677676621 1223356677788889885422 2 24445554 233566666655555544
No 377
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.28 E-value=3.9e-05 Score=63.53 Aligned_cols=197 Identities=15% Similarity=0.159 Sum_probs=111.1
Q ss_pred eEEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCc--cccCCCCCceEEEecCccccCCC
Q 036024 47 DIIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSI--YEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 47 ~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
-+-+++-| +...|. --|++..++|.++|++|++.+|+||++.+....|..-.- ..++..+| +-+|||-+- .
T Consensus 272 VaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD----~vTFSKK~q-~ 346 (484)
T KOG1405|consen 272 VAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPD----VVTFSKKFQ-T 346 (484)
T ss_pred eEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCcc----ceehhhhhh-c
Confidence 33444445 555553 357788999999999999999999999875444432211 12222223 337999884 6
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-- 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-- 200 (272)
| || .-.+++.- -+.++.+- ++.+-+.-. ..+.++++.... +.+.++.+..-+.|..+|.++.
T Consensus 347 g---Gf-fh~~~frp------n~pYrifN--TWmGdP~k~-lll~~vv~~I~~---~~Ll~n~~~vG~~l~~gL~~Lq~~ 410 (484)
T KOG1405|consen 347 G---GF-FHDEEFRP------NEPYRIFN--TWMGDPSKN-LLLEEVVQEIKR---EDLLNNVAHVGKALLKGLLELQAK 410 (484)
T ss_pred C---cc-ccCcccCC------CchHHHhh--hhcCChHHH-HHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 65 33333311 12333222 222222221 112333332221 5566667777777888887752
Q ss_pred ----CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024 201 ----IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL 271 (272)
Q Consensus 201 ----~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~ 271 (272)
+.-... .|.|+..+++.....+.+...++..|+.+.. |+ ...+||- +.-++...+-+++++.+.
T Consensus 411 ~p~~~~~~RG-rGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GG---Cg---~~siRfRPsLvf~~~Ha~i~l~~~~k~ 480 (484)
T KOG1405|consen 411 YPGKINNLRG-RGTFIAWDCPSGSIRDKLILIARLNGVNLGG---CG---DKSIRFRPSLVFRKHHADIFLDIFDKI 480 (484)
T ss_pred Cchhhhcccc-cceEEEEeCCChHHHHHHHHHHHHcCceecc---cc---cceeeeccceeehhhhHHHHHHHHHHH
Confidence 222232 5788989999655566666677777888742 32 3345555 433565666666666654
No 378
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.24 E-value=4.8e-05 Score=63.22 Aligned_cols=215 Identities=16% Similarity=0.196 Sum_probs=128.8
Q ss_pred CCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc----cccCCC----CCCccccC----CCCCceE
Q 036024 44 SRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA----YVTDGC----PRSIYEIP----GAREVAI 110 (272)
Q Consensus 44 ~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~----~~~~~~----~~~~~~~~----~~~~~~i 110 (272)
.++..|+++ ..|...|+-.|-+.++++.++|++|++.++.|.+... |.-... ..++.++. ...| -
T Consensus 184 ~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD--~ 261 (471)
T COG3033 184 DNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD--G 261 (471)
T ss_pred ccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh--h
Confidence 456667776 7788999999999999999999999999999976531 111100 12222220 0111 1
Q ss_pred EEecCccccCC-CccceeEEEecccccccCCcchHHHHHhhh-----hhccCCcchHHHHHHHHhccccc-HHHHHHHHH
Q 036024 111 EISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVINDFNRII-----CTCFNGASNIAQAGGLACLSSEG-LEAVHSVVD 183 (272)
Q Consensus 111 ~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~ 183 (272)
..-|.-|..-. -| |+++..++..++ +....+-.. ..+..+.+.-...+++.-|.+.. ..|+..+..
T Consensus 262 ~~mS~KKD~lvnmG---Gfl~~~D~~~fD----vy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~ 334 (471)
T COG3033 262 CTMSAKKDGLVNMG---GFLCFKDDSFFD----VYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVA 334 (471)
T ss_pred heeeccccceeccc---cEEEecCccHHH----HHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHH
Confidence 23355563311 23 777777764211 111111111 12333344444555555554332 255555554
Q ss_pred HHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC---------CCChHHHHHHHHHhcCeEeeCCCCCCCC---------
Q 036024 184 YYKENTKILIDTLASLGIKVYGGINAPYVWAHFP---------GRKSWDVFAEILEKTHITTVPGSGFGPG--------- 245 (272)
Q Consensus 184 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~---------~~~~~~~~~~ll~~~gi~v~~g~~~~~~--------- 245 (272)
| .++|.++|++.|+.+..|.+|.-++++.. .-..+.+..+|.++.||...--..|...
T Consensus 335 Q----v~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~ 410 (471)
T COG3033 335 Q----VQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQH 410 (471)
T ss_pred H----HHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccC
Confidence 4 46788999999999998888988888753 1245567788889999988655555311
Q ss_pred --CCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 246 --GEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 246 --~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
....+|+++- -|.+.++...+.++++
T Consensus 411 ~~~~elvRltipRrtYt~~HmD~V~~a~~~l 441 (471)
T COG3033 411 PPPAELVRLTIPRRTYTQTHMDFVIEAFKAL 441 (471)
T ss_pred CCchheeeEeccccccchhHHHHHHHHHHHH
Confidence 1257999972 2677777777666543
No 379
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.10 E-value=0.00019 Score=63.77 Aligned_cols=152 Identities=14% Similarity=0.097 Sum_probs=96.0
Q ss_pred CCCc-eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 43 TSRT-DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 43 ~~~~-~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
.+.. |+++++||+ --|.+.. +++|.+.+.++++++.+|++|..........+-... ....+++..|.+|.++
T Consensus 163 ~~~~~k~~vitnpT-YdGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~--~~~~~~~tqS~HK~l~- 235 (557)
T COG1982 163 HPDAEKLAVITNPT-YDGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL--NGGADFVTQSTHKLLA- 235 (557)
T ss_pred ChhhheeEEEecCc-cceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCcchhh--hcCceEEEechhhhhh-
Confidence 3566 889998887 4588877 888888898999999999999743222211111111 1344699999999996
Q ss_pred CccceeEEEeccc-ccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH----HHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TGVRLGWTVVPEE-LLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL----EAVHSVVDYYKENTKILIDTL 196 (272)
Q Consensus 122 ~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~L 196 (272)
+..+..++...+. .+. .+++........++++.....|++.+.+.... +..++..+..-+.++.+++..
T Consensus 236 alSQaS~iHv~~~~~~~------~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~ 309 (557)
T COG1982 236 ALSQASMIHVKDGRAVN------HERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLI 309 (557)
T ss_pred hhhhhHHHhhCCCccCC------HHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555666666652 211 45666666666666777777777777442222 222223444455556666666
Q ss_pred HhC-CCeEecCC
Q 036024 197 ASL-GIKVYGGI 207 (272)
Q Consensus 197 ~~~-g~~~~~~~ 207 (272)
.+. ++.+..+.
T Consensus 310 ~~~~~~~~~~~~ 321 (557)
T COG1982 310 NEIGFFPVLQPE 321 (557)
T ss_pred HhcCCeeecccc
Confidence 665 56665543
No 380
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.03 E-value=0.0028 Score=54.23 Aligned_cols=231 Identities=16% Similarity=0.195 Sum_probs=128.2
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
..++-.| +++.++.++.. |++. ..++-.+++.+|+ -.|. ...++++|.+.++.+++++++= .+
T Consensus 183 Tra~~~g~~i~~~~~~d~~----~l~~~~~~~~~gv~vQyP~-~~G~--~~~d~~~l~~~~h~~~al~~v~---aD---- 248 (450)
T COG0403 183 TRAEGLGIEIEVVDADDLD----DLESADDGDVFGVLVQYPN-TFGI--VEEDLRALIEAAHSAGALVIVA---AD---- 248 (450)
T ss_pred hhcccCceEEEEeccchhh----hhhhccccCeEEEEEecCC-CCCc--cchhHHHHHHHHhhcCCEEEEE---ec----
Confidence 4445566 77777766221 1222 3577888988888 5562 2367999999999999887752 11
Q ss_pred CCCCCccccCCCCCceEEEecCccc---cCCCccceeEEEecccccccC-----------------CcchHH---HHHhh
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKF---SGFTGVRLGWTVVPEELLFSS-----------------GFPVIN---DFNRI 150 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~---~g~~g~r~G~~~~~~~~~~~~-----------------~~~~~~---~~~~~ 150 (272)
+-...+...++..+--|++|+.+.. +|+.|-.+||+.+.+++.+.. ...+.. .+++-
T Consensus 249 plaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRRe 328 (450)
T COG0403 249 PLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRRE 328 (450)
T ss_pred hhHhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhh
Confidence 1011122222222223888887652 233466788888887775210 011111 11222
Q ss_pred hhhccCCcchHHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceE--EEeecCCCChHHH
Q 036024 151 ICTCFNGASNIAQAGGLACL--SSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPY--VWAHFPGRKSWDV 224 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~--~~i~l~~~~~~~~ 224 (272)
+.++...++.. ..|..+.+ .-.+.+.++++.++..++..++.+.|++. |+++... .+| +.++++......+
T Consensus 329 KATSNICTnQa-LlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~~~~~l 405 (450)
T COG0403 329 KATSNICTNQA-LLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEEVAEAL 405 (450)
T ss_pred ccchhhhHHHH-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchhHHHHH
Confidence 22222222221 11111111 13455788999999999999999999966 5777764 444 4455543122222
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 225 FAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
..+ ....|+.+..- ...++=+++ ..++++++.+++.+...
T Consensus 406 ~~~-~~~~G~~L~~~------~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 406 LAA-AIAGGINLRRV------DADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred HHH-HHhcCCceeee------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 222 23336665421 234566776 34789999999888653
No 381
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.00 E-value=0.00018 Score=60.07 Aligned_cols=201 Identities=12% Similarity=0.097 Sum_probs=123.8
Q ss_pred EEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcccee
Q 036024 48 IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLG 127 (272)
Q Consensus 48 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G 127 (272)
-+.++..+.-+|+-++. ...+. .+.++|.|.+-.-+.. +..+..++ ++..+..|.+|..| ++
T Consensus 147 yv~~~~NeTi~Gv~v~~--~p~~~-----~~~~~v~D~SS~ilsr---~iDvsk~d------viyagaQKnlGpaG--lt 208 (365)
T COG1932 147 YVHFCWNETISGVEVPE--LPDIG-----SDGLLVADASSAILSR---PIDVSKYD------VIYAGAQKNLGPAG--LT 208 (365)
T ss_pred EEEEecCCcccceEccC--CCCCC-----CCceEEEecccHHhcC---CCChhHcc------eEEEehhhccCccc--eE
Confidence 36667667777887662 11111 1278888877654321 22233331 77789999999888 78
Q ss_pred EEEecccccccCCc----chHHHH-HhhhhhccCCcchHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024 128 WTVVPEELLFSSGF----PVINDF-NRIICTCFNGASNIAQAGGLACLSS-EGLEAVHSVVDYYKENTKILIDTLASLGI 201 (272)
Q Consensus 128 ~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 201 (272)
.++.+++.+.+.-. ...... ......+.++++..+.+.+...++. .....++.+.++-+++++.|.+.+.+.++
T Consensus 209 vvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~f 288 (365)
T COG1932 209 VVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDF 288 (365)
T ss_pred EEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 88888888543311 111111 1222456667777777766666652 22245788889999999999999998754
Q ss_pred eEec----CCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 202 KVYG----GINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 202 ~~~~----~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
.... ..+-+.+.+.+.+. -+..++..+. ++|+..--|+. -.+.+|+|+++ +.|+++.++.-++.+
T Consensus 289 y~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae-~~gl~~lkGhr----~vgGmRasiynA~~~e~veaL~~fm~~f 360 (365)
T COG1932 289 YRNLVAKANRSRMNVTFTLVDAELDKGFVAEAE-AAGLIYLKGHR----SVGGLRASIYNAVPLEDVEALTDFMDWF 360 (365)
T ss_pred cccccchhhccceeEEEEcCcHHHHHHHHHHHH-HcCCceecccc----CCCceeeeeecCCCHHHHHHHHHHHHHH
Confidence 3221 22345677777643 3445555554 44766655631 13559999866 678888888777654
No 382
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.96 E-value=0.00089 Score=63.41 Aligned_cols=204 Identities=12% Similarity=0.078 Sum_probs=118.0
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC---
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG--- 120 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g--- 120 (272)
.++-.+++.+|| -.|.+ +++++|.+++++.|+++++ .+.- +... .-.+..++.. -|++|+ ++.||
T Consensus 207 ~~~~~v~vq~P~-~~G~i---~d~~~i~~~~h~~gal~~~-~~d~-laL~-ll~~Pge~GA----DI~vG~-~Q~fGvp~ 274 (954)
T PRK12566 207 HAVFGALLQYPD-THGEI---RDLRPLIDQLHGQQALACV-AADL-LSLL-VLTPPGELGA----DVVLGS-TQRFGVPM 274 (954)
T ss_pred CCEEEEEEECCC-CceEE---ccHHHHHHHHHHcCCEEEE-EeCH-HHHh-CCCChhhcCC----cEEeeC-CCcCCCCC
Confidence 367788888887 56877 5699999999999988662 2211 1111 1222333322 266775 34343
Q ss_pred -CCccceeEEEeccccccc-----------------CCcchHHH---HHhhhhhccCCcchHHHHHHHHhc-ccccHHHH
Q 036024 121 -FTGVRLGWTVVPEELLFS-----------------SGFPVIND---FNRIICTCFNGASNIAQAGGLACL-SSEGLEAV 178 (272)
Q Consensus 121 -~~g~r~G~~~~~~~~~~~-----------------~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~l-~~~~~~~~ 178 (272)
..|--.|++.+.+++.+. ....+..+ +++-+.++...++..-...+..+. .-.+.+.+
T Consensus 275 ~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl 354 (954)
T PRK12566 275 GYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGL 354 (954)
T ss_pred CCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHH
Confidence 235557888887776421 11111111 122222233222222222222222 12345778
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEecCCCceE--EEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--
Q 036024 179 HSVVDYYKENTKILIDTLASLGIKVYGGINAPY--VWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-- 254 (272)
Q Consensus 179 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-- 254 (272)
++..++...++.++.+.|.+.|+++... .+| +.+.+.. ...++..+.++. ||-++-- +.+.+.+|+
T Consensus 355 ~~ia~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~~~-~~~~~~~~a~~~-~~n~r~~------~~~~~~~s~de 424 (954)
T PRK12566 355 KRIAQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEVGG-AQAAIIESAEAA-RINLRIL------GRGRLGVSLDE 424 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEccC-CHHHHHHHHHHC-CCeeEEe------CCCeEEEEeCC
Confidence 8899999999999999999999887654 344 4444421 344555555444 8877532 245788888
Q ss_pred cCCHHHHHHHHHHHH
Q 036024 255 FGHRESILEASRRLE 269 (272)
Q Consensus 255 ~~~~~~i~~~l~~l~ 269 (272)
..+.+|+..++..+.
T Consensus 425 ~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 425 TCDEATVARLFDIFL 439 (954)
T ss_pred CCCHHHHHHHHHHhc
Confidence 447889999988873
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.86 E-value=0.0018 Score=55.15 Aligned_cols=242 Identities=11% Similarity=0.038 Sum_probs=112.8
Q ss_pred hcccc-eeEEeecCCCCC-cccCCCC--------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 19 VGKYC-NIEYLECGPGNN-FFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 19 ~~~~g-~~~~~~~~~~~~-~~~dl~~--------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
....| +++.+|...+++ ...|++. -++..+.++++.+---+... +++++|+++|++||+..++..+|+
T Consensus 118 i~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYg 195 (389)
T PF05889_consen 118 IERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYG 195 (389)
T ss_dssp HHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTT
T ss_pred HHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchh
Confidence 34456 777777654322 2222221 14556777776654444442 469999999999999999999997
Q ss_pred ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHH
Q 036024 89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLA 168 (272)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 168 (272)
-=.. .-...+.........-+++.|.-|.|- -+.--+.+.++.+. ++...........+..+..-....+.
T Consensus 196 vQ~~-~~~~~i~~a~~~GRvda~vqS~dkNF~-VPvGgai~As~~~~-------~i~~vs~~YpGRas~sp~ld~~itLl 266 (389)
T PF05889_consen 196 VQSS-KCMHLIQQAWRVGRVDAFVQSTDKNFM-VPVGGAIMASFDPS-------GILAVSKEYPGRASASPSLDLFITLL 266 (389)
T ss_dssp TT-H-HHHHHHHHHHHHSTCSEEEEEHHHHHC-EESSHEEEEESSHH-------HHHHHHHTSHSHBTSHHHHHHHHHHH
T ss_pred hhHH-HHHHHHHHHHhcCCcceeeeecCCCEE-ecCCCcEEEecCHH-------HHHHHHHHhhhhhhcccchHHHHHHH
Confidence 4000 000000000000111278889999884 32222334444433 24455444433333233333322222
Q ss_pred hcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCC------ChHHHHHHHHHhcCeE----e
Q 036024 169 CLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGR------KSWDVFAEILEKTHIT----T 236 (272)
Q Consensus 169 ~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~------~~~~~~~~ll~~~gi~----v 236 (272)
.+-..++ ..+.++.+.+....+.+++.-++.+-++.. |.....+.+.++.. +...+..+|..+ ||. +
T Consensus 267 ~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R-~VsG~RvV 345 (389)
T PF05889_consen 267 SLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKR-GVSGIRVV 345 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHT-TEESSEEE
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhC-Ccccceee
Confidence 2222222 233333334444444444444444544432 22333445555421 124455555544 654 2
Q ss_pred eCCCCCC-----CCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 237 VPGSGFG-----PGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 237 ~~g~~~~-----~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
.|+..+. .-...++-++ +..++||++.++++|++++
T Consensus 346 ~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i 388 (389)
T PF05889_consen 346 TPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKII 388 (389)
T ss_dssp ETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHH
T ss_pred ccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 2222111 1113677773 4669999999999999864
No 384
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=97.81 E-value=0.00032 Score=59.72 Aligned_cols=139 Identities=21% Similarity=0.139 Sum_probs=86.5
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCC--CCCCCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDL--KGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl--~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
..+..+..| +++.+-.... -...|. .-.+++++++-+ ++|.+--..++ .++++++|+++++++++|..-+..
T Consensus 124 v~d~~~~aG~~l~EvG~tn~-t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~ 199 (395)
T COG1921 124 VPDIIRLAGAKLVEVGTTNR-THLKDYELAINENTALLLKVHSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGAL 199 (395)
T ss_pred hhHHHHHcCCEEEEecccCc-CCHHHHHHHhccCCeeEEEEeecccccccccc---HHHHHHHHHHcCCCEEEecCCccc
Confidence 566677777 7777766533 111222 224677776655 44442222233 788999999999999999998765
Q ss_pred ccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHh
Q 036024 91 VTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLAC 169 (272)
Q Consensus 91 ~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 169 (272)
+... ......... .| +++.|-.|.+| |.+-|.+++.+++ ++.+.+.-.............++.+.
T Consensus 200 v~~e~~l~~~la~G--aD--LV~~SgdKllg--GPqaGii~GkKel--------I~~lq~~~l~Ralrv~K~tla~l~~a 265 (395)
T COG1921 200 VDKEPDLREALALG--AD--LVSFSGDKLLG--GPQAGIIVGKKEL--------IEKLQSHPLKRALRVDKETLAALEAA 265 (395)
T ss_pred cccccchhHHHhcC--CC--EEEEecchhcC--CCccceEechHHH--------HHHHHhhhhhhhhhcCcHhHHHHHHH
Confidence 4311 112222222 12 88889999996 4468999999999 55555544444444666666666666
Q ss_pred cc
Q 036024 170 LS 171 (272)
Q Consensus 170 l~ 171 (272)
++
T Consensus 266 Le 267 (395)
T COG1921 266 LE 267 (395)
T ss_pred HH
Confidence 65
No 385
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00061 Score=58.54 Aligned_cols=248 Identities=14% Similarity=0.014 Sum_probs=126.3
Q ss_pred hHHhcccc-eeEEeecCCCCCcccC-CCCC-------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPD-LKGT-------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~-------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~ 86 (272)
+..+.-.| ++..++.+.+.++..| +.+. .-+-.+++.+.. .||. -.-+++.+|..+|+++++++.+|.+
T Consensus 196 eka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-TT~~-ca~D~l~elg~Vc~~~glWLHVDAA 273 (511)
T KOG0628|consen 196 EKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG-TTSS-CAFDELEELGPVCREEGLWLHVDAA 273 (511)
T ss_pred HHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-Cccc-cccccHHHhcchhhhcCEEEEeehh
Confidence 33333445 7888888875555555 2221 223333433432 3333 3457899999999999999999999
Q ss_pred CCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH-HHHHhhh-----hhccCC-c
Q 036024 87 YAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI-NDFNRII-----CTCFNG-A 158 (272)
Q Consensus 87 ~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~-~ 158 (272)
|++-.+.- ....+..--...| -+-.-.||.+- --.-+.-++..+........++- -.+.... ...+.. +
T Consensus 274 YAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~~~-vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqip 350 (511)
T KOG0628|consen 274 YAGSAFICPEFRYLMRGIEYAD--SFNFNPHKWLL-VNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIP 350 (511)
T ss_pred hccccccCHHHHHHhhcchhhc--cccCChhheeE-EeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccc
Confidence 99644331 1111111100111 11123456442 22223333333221000000000 0000000 000000 1
Q ss_pred chHHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHhcC
Q 036024 159 SNIAQAGGLACL--SSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTH 233 (272)
Q Consensus 159 ~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~g 233 (272)
-.-...++..++ +..+.+.+++..++.-+.++.+.+.+.+- -+++..+..--.+.+++. +...+.+..++-....
T Consensus 351 l~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~ne~Ll~~in~~g~ 430 (511)
T KOG0628|consen 351 LGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEINEALLNRLNSSGR 430 (511)
T ss_pred cccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHHHHHHHHHHHhcCc
Confidence 111112222222 23333444444455555555565555543 577776655445667776 4556788888888888
Q ss_pred eEeeCCCCCCCCCCCeEEEEccC---CHHHHHHHHHHHHHh
Q 036024 234 ITTVPGSGFGPGGEEYIRISGFG---HRESILEASRRLEAL 271 (272)
Q Consensus 234 i~v~~g~~~~~~~~~~~R~s~~~---~~~~i~~~l~~l~~~ 271 (272)
|.+.|.+ ..+.-.+|++++. +.++++++.+.|.+.
T Consensus 431 i~l~~~~---l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~ 468 (511)
T KOG0628|consen 431 IHLVPAS---LHGKFVLRFAVCSPLTNESDIDEAWKIIFEA 468 (511)
T ss_pred EEEEEee---ecceEEEEEEecCCCCcHHHHHHHHHHHHHH
Confidence 9998876 4456789999743 678899998888754
No 386
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.66 E-value=0.00017 Score=60.74 Aligned_cols=171 Identities=18% Similarity=0.121 Sum_probs=51.3
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
+..+..| +++.+-.... -..-|.++ .+++.+++-.+++|..-+-+ ..-.++++++++++|++++++|-.-+.+..
T Consensus 106 ~vm~~sGa~lvEVGttN~-t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~d 184 (367)
T PF03841_consen 106 DVMRQSGARLVEVGTTNR-THLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVD 184 (367)
T ss_dssp --------------------------------------------------------HHHHHHHHHT--EEEE-TTHHHHH
T ss_pred cccccccccccccccccc-cccccccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcC
Confidence 4445555 6666655422 11223333 37888888888777732211 112489999999999999999976632211
Q ss_pred ----C-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHH
Q 036024 93 ----D-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGL 167 (272)
Q Consensus 93 ----~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 167 (272)
+ +..+++...... +--+++.|-.|.+|-| +.|.+++..++ ++.+...-.............++.
T Consensus 185 l~~~gl~~Ep~v~~~~~~-GaDlV~fSGdKlLGGP--QaGiI~Gkk~l--------I~~lk~~pl~RalrvdK~tla~L~ 253 (367)
T PF03841_consen 185 LSPYGLPDEPTVQEYLAA-GADLVTFSGDKLLGGP--QAGIIVGKKEL--------IEKLKKHPLGRALRVDKLTLAALE 253 (367)
T ss_dssp HHTT----------CCCC-T-SEEEEETTSSSSS---S-EEEEEEHHH--------HHHHHHHHHTTT-B--HHHHHHHH
T ss_pred cccccCccccHHHHHhhc-CCCEEEEECCCcCCCC--CeEEEEeCHHH--------HHHHhhCCCcceEeeCHHHHHHHH
Confidence 1 112333333211 2228888999999755 47999999999 555654444444446666666666
Q ss_pred Hhccccc-----------HHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 168 ACLSSEG-----------LEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 168 ~~l~~~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
+.++... .+.+.+..+.++++++.+.+.|...
T Consensus 254 atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 254 ATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp HHHHH--------------------------------------
T ss_pred HHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 6555211 1335555667777777777777664
No 387
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.59 E-value=0.00083 Score=57.21 Aligned_cols=233 Identities=14% Similarity=0.172 Sum_probs=128.1
Q ss_pred eeEEeecCCCCCcccC-CCCC-----CC-ceEEEEe--cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc-cccC
Q 036024 24 NIEYLECGPGNNFFPD-LKGT-----SR-TDIIFFC--SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA-YVTD 93 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~d-l~~~-----~~-~~~i~~~--~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~-~~~~ 93 (272)
.++.++.++.+.+.+| +++. .+ ---.+++ .-..--|.. +++..|+++|++|++++.+|.++++ +...
T Consensus 223 ~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWmHvDAAwGGglLmS 299 (510)
T KOG0629|consen 223 HCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWMHVDAAWGGGLLMS 299 (510)
T ss_pred eeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEEEeecccccccccC
Confidence 7888999887666666 4441 11 0112232 335556665 6799999999999999999999986 3333
Q ss_pred CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH-----------hhhhhccCCcchHH
Q 036024 94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN-----------RIICTCFNGASNIA 162 (272)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 162 (272)
........-....+ -+.=+.+|.+| ..++++......+-+ +.+.. +....+.-+.....
T Consensus 300 ~k~R~kl~Giera~--SvtwnpHK~~g-aplqCsa~l~r~~gl-------l~~Cn~~~A~YLFq~dK~YdvS~DTgdK~i 369 (510)
T KOG0629|consen 300 RKHRHKLTGIERAN--SVTWNPHKLMG-APLQCSAFLTREEGL-------LQRCNQMSAIYLFQQDKFYDVSYDTGDKAI 369 (510)
T ss_pred hhhHhhccCccccC--ceeecHHHhhc-CcchhhHHHHHHHHH-------HHhhcccchhhhhccCceeecccccccchh
Confidence 32222211111112 22235689998 667888766665542 11111 01111111222222
Q ss_pred HHH-------HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE-ec--CCCceEE-EeecC---C-CC------
Q 036024 163 QAG-------GLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKV-YG--GINAPYV-WAHFP---G-RK------ 220 (272)
Q Consensus 163 ~~a-------~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~--~~~~~~~-~i~l~---~-~~------ 220 (272)
|.. ..-+....+....++..+++-++++++.+.|++. |... .. |+..+++ |...+ . ..
T Consensus 370 QCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~ 449 (510)
T KOG0629|consen 370 QCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDS 449 (510)
T ss_pred hcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhh
Confidence 321 1122234455667889999999999999999998 4333 22 3323332 32221 1 01
Q ss_pred -----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC---CHHHHHHHHHHHHHh
Q 036024 221 -----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG---HRESILEASRRLEAL 271 (272)
Q Consensus 221 -----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~---~~~~i~~~l~~l~~~ 271 (272)
....-.+++++ |-... |...-...++++|.-+++ +.++++-+++.|.++
T Consensus 450 rL~kVaPkIK~~Mm~~-Gt~Mi-~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 450 RLVKVAPKIKERMMKK-GTTMI-GYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred HHHhhCcHHHHHHHhc-cceee-EecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 11234455666 44332 222122336789988644 677888888887653
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.57 E-value=0.0009 Score=54.54 Aligned_cols=112 Identities=17% Similarity=0.300 Sum_probs=77.4
Q ss_pred HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHc--CCEEEEcccCCc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNN--GSIIIFDSAYAA 89 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~--~~~vi~D~~~~~ 89 (272)
+.++..| ....+|+..++-.+.+ ++. .+++|+|.+. +-.+..=-.++.+++++++++.++. ++++++|.+|+.
T Consensus 133 gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE 212 (416)
T COG4100 133 GSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE 212 (416)
T ss_pred ccHHHhCcceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence 4456677 7778888766544444 221 4889999997 3333333347788999999999875 799999999999
Q ss_pred cccCCCCCCccccCCCCCceEEEecCccccCCCcc--ceeEEEeccccc
Q 036024 90 YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV--RLGWTVVPEELL 136 (272)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~--r~G~~~~~~~~~ 136 (272)
|+-...|..+ .. | +..+|+-|.-| .|+ --||+.+.++++
T Consensus 213 FvE~~EPt~v---Ga--D--liAGSLIKNpG-GgiaktGGYiaGk~~~v 253 (416)
T COG4100 213 FVEEKEPTHV---GA--D--LIAGSLIKNPG-GGIAKTGGYIAGKAELV 253 (416)
T ss_pred hhhccCcccc---ch--h--hhccceeeCCC-CceeeccceeechHHHH
Confidence 8866544332 11 1 78899999887 332 248888888884
No 389
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.30 E-value=0.018 Score=47.39 Aligned_cols=210 Identities=13% Similarity=0.040 Sum_probs=117.3
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
..+.+++++..+..||+.++ +.+|-..-+..|+++=.|-+|+. +..+..+..++.+ +-.=..-|-+....
T Consensus 213 DeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv---gNVpL~LHdWgVD----FACWCSYKYlnaGa 282 (465)
T KOG3846|consen 213 DEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV---GNVPLQLHDWGVD----FACWCSYKYLNAGA 282 (465)
T ss_pred CeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh---cCCceEEeecCCc----eEEEeeecccccCC
Confidence 56777888899999999998 77777666777999999999874 3334455555432 22222345442111
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhh-----------------hccCCcchHHHHHHHHhcccccHHHHHHHHHHHH
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIIC-----------------TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK 186 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 186 (272)
-.+|-+.+.+....+.++++...|..-.. ...+.++.+...++..-++....-.+++.|++-.
T Consensus 283 GgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~ 362 (465)
T KOG3846|consen 283 GGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSL 362 (465)
T ss_pred CccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhh
Confidence 12455556565555555555554422211 1222344444444444444222233455555444
Q ss_pred HHHHHHHHHHHhC-C-----------CeEecCC----CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeE
Q 036024 187 ENTKILIDTLASL-G-----------IKVYGGI----NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYI 250 (272)
Q Consensus 187 ~~~~~l~~~L~~~-g-----------~~~~~~~----~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~ 250 (272)
-...++...++.. | +.+..|. .|-.+.+.+.. +....+.+|-++ |+..- ...++.+
T Consensus 363 lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-p~~~vfqeL~kr-Gv~~D------kR~PNvI 434 (465)
T KOG3846|consen 363 LLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-PTPKVFQELHKR-GVIGD------KRRPNVI 434 (465)
T ss_pred hHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC-CchHHHHHHHHc-Ceecc------ccCCCce
Confidence 4444554444432 3 2222222 23344444442 334666776555 88763 2336789
Q ss_pred EEE---ccCCHHHHHHHHHHHHHh
Q 036024 251 RIS---GFGHRESILEASRRLEAL 271 (272)
Q Consensus 251 R~s---~~~~~~~i~~~l~~l~~~ 271 (272)
|++ ++++-.|+..++..|.++
T Consensus 435 RvAPvpLYN~f~Dvy~f~n~L~e~ 458 (465)
T KOG3846|consen 435 RVAPVPLYNTFSDVYIFVNALNEA 458 (465)
T ss_pred EeecchhhccHHHHHHHHHHHHHH
Confidence 998 578888888888887765
No 390
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.16 E-value=0.054 Score=49.76 Aligned_cols=189 Identities=11% Similarity=0.001 Sum_probs=100.7
Q ss_pred ccccCccc--chHHhcccc----eeEEeecCCCCCcccC-CCC-C-----C--CceEEEEecCCCccccCCCHHHHHHHH
Q 036024 7 VIVGQAGD--LEDEVGKYC----NIEYLECGPGNNFFPD-LKG-T-----S--RTDIIFFCSPNNPTGHAATQNQLEQLV 71 (272)
Q Consensus 7 ~~~~~~~~--~~~~~~~~g----~~~~~~~~~~~~~~~d-l~~-~-----~--~~~~i~~~~p~nptG~~~~~~~l~~l~ 71 (272)
++.+...+ +...+.-+| .++.+|++.+..+.++ +++ + . ++-+|+-+-.+..+|.+=+ +++|+
T Consensus 225 vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp---l~eI~ 301 (608)
T TIGR03811 225 WLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG---IDKIV 301 (608)
T ss_pred EEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC---HHHHH
Confidence 44444434 445555555 4899999866555554 322 1 1 2233455577889999844 66666
Q ss_pred HHH---HHcCC--EEEEcccCCccc---c-CCC--CCCc-------------------------cccCCCCCceEEEecC
Q 036024 72 EFA---RNNGS--IIIFDSAYAAYV---T-DGC--PRSI-------------------------YEIPGAREVAIEISSF 115 (272)
Q Consensus 72 ~~~---~~~~~--~vi~D~~~~~~~---~-~~~--~~~~-------------------------~~~~~~~~~~i~~~s~ 115 (272)
++| +++++ ++.+|.+|+++. + +.. ..+. ..+.+.+.---+.-.+
T Consensus 302 ~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDp 381 (608)
T TIGR03811 302 ALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDP 381 (608)
T ss_pred HHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCc
Confidence 666 77887 699999999753 1 100 0110 0111122111334478
Q ss_pred ccccCCCccceeEEEecccccccCCcchHHHHHhhh-------hhccCCcchHHHHHHH--Hhcccc--cHHHHHHHHHH
Q 036024 116 SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII-------CTCFNGASNIAQAGGL--ACLSSE--GLEAVHSVVDY 184 (272)
Q Consensus 116 sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~--~~l~~~--~~~~~~~~~~~ 184 (272)
+|.+. ....+|.++..+....+....-...+.... .......+.++..|+. ..++.. +.+.+.++.++
T Consensus 382 HK~g~-~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~ 460 (608)
T TIGR03811 382 HKMGY-IPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGA 460 (608)
T ss_pred ccccc-cCCCeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99876 446788888876543211111011111000 0001112222222222 222222 55677889999
Q ss_pred HHHHHHHHHHHHHhC
Q 036024 185 YKENTKILIDTLASL 199 (272)
Q Consensus 185 ~~~~~~~l~~~L~~~ 199 (272)
.-+.++++.+.|..+
T Consensus 461 ~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 461 SIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999884
No 391
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.14 E-value=0.1 Score=42.60 Aligned_cols=234 Identities=15% Similarity=0.140 Sum_probs=130.3
Q ss_pred chHHhcccc--eeEEeecCCC-CCcccC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 15 LEDEVGKYC--NIEYLECGPG-NNFFPD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 15 ~~~~~~~~g--~~~~~~~~~~-~~~~~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
....++++| ..+..++... .+-.|| .+..++.+.+++|....--|+-++.-. .-.-+++.+|.|.+--
T Consensus 112 A~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~da~yvyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSn 185 (370)
T KOG2790|consen 112 AAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNPDASYVYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSN 185 (370)
T ss_pred HHHHHHhhCCceEEeccccccccCcCCChhhcccCCCccEEEEecCceeeceecCCCC------CCCCCCceEEEecccc
Confidence 445667788 3343333322 123344 222477788888866666677655222 1123578888887654
Q ss_pred ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcc---hHHHHHhhh--hhccCCcchHHH
Q 036024 89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP---VINDFNRII--CTCFNGASNIAQ 163 (272)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~ 163 (272)
.+. . +..+... -++..+..|.+|+.|+. .++..++++-..... .. .+.... .....+++..+.
T Consensus 186 flS-r--pvDvsk~------gvi~aGAQKN~G~aG~T--vvivr~dllg~~~~~tP~v~-dyk~~~~NnSlyNTpP~f~i 253 (370)
T KOG2790|consen 186 FLS-R--PVDVSKF------GVIFAGAQKNVGPAGVT--VVIVRKDLLGNALDITPSVL-DYKIMDKNNSLYNTPPCFGI 253 (370)
T ss_pred hhc-C--Cccchhc------ceEEeccccccCccccE--EEEEehhhhcccccCCcccc-ceeeeccccccccCCCeeee
Confidence 322 1 1122222 16677889999988853 356666664221111 00 111000 122334555555
Q ss_pred HHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC----CceEEEeecC-CCChHHHHHHHHHhcCeEe
Q 036024 164 AGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-GIKVYGGI----NAPYVWAHFP-GRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 164 ~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v 236 (272)
++.--.++.... ..++++.+.-.++.+.+.+.+... |+-..+-+ +-+.+.+++. ..-..++.....+++=+.+
T Consensus 254 y~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~L 333 (370)
T KOG2790|consen 254 YVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQL 333 (370)
T ss_pred eehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhcc
Confidence 544444442111 345778888899999999999886 76554322 2345666665 3344566677666744444
Q ss_pred eCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 237 VPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 237 ~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
. |+ ..-+.+|-|+++ +.++++++..-++++
T Consensus 334 K-Gh----RSVGGiRASlYNAisv~~~q~L~~~m~~F 365 (370)
T KOG2790|consen 334 K-GH----RSVGGIRASLYNAISVEEVQKLAAFMKEF 365 (370)
T ss_pred c-cc----cccccchhhhhccccHHHHHHHHHHHHHH
Confidence 2 33 225789999865 788888877776653
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=95.40 E-value=0.58 Score=42.79 Aligned_cols=238 Identities=13% Similarity=0.067 Sum_probs=124.2
Q ss_pred chHHhcccc-eeEEeecCCCCCcccC-CCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
....+++.| +++++..+.++++... +.. .++..+++++.|+.- |+ -.+.+++++++.++||.-|+.|.+.
T Consensus 643 NPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~-Gv--fE~~i~d~cd~iHehGGQVYlDGAN 719 (1001)
T KOG2040|consen 643 NPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GV--FEEGIDDICDIIHEHGGQVYLDGAN 719 (1001)
T ss_pred ChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEeccccc-cc--ccccHHHHHHHHHhcCCEEEecCCC
Confidence 556778888 9999999876554332 222 256778888887632 43 3467999999999999999999876
Q ss_pred CccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcc--hHHH--------HHhhhhh
Q 036024 88 AAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFP--VIND--------FNRIICT 153 (272)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~--~~~~--------~~~~~~~ 153 (272)
-.- ...+....+.... +.=--++|+|..| |--+|=+.+...+.. .++. +.+. +......
T Consensus 720 MNA-----qVGlc~pGd~GaD-V~HLNLHKTFcIPHGGGGPg~gPIgVK~HLap-fLP~HpVvs~~~~~~~~~~gsVsaa 792 (1001)
T KOG2040|consen 720 MNA-----QVGLCRPGDIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSPGRPEDTSPVGSVSAA 792 (1001)
T ss_pred ccc-----eecccCCcccccc-ceeecccceeeecCCCCCCCCCccchhhhccc-cCCCCCccCCCCCCCCCCccceecc
Confidence 421 1122222111111 2222467776433 333455444433310 0000 0000 1111111
Q ss_pred ccCCcc-hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceE---EEeecC------CCChH
Q 036024 154 CFNGAS-NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPY---VWAHFP------GRKSW 222 (272)
Q Consensus 154 ~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~---~~i~l~------~~~~~ 222 (272)
.+.+.. .+...+-.+++...+ ++..-+.---+++++.+.|+.. .+-+.+. .+.. +.+++. +.+..
T Consensus 793 P~Gsa~ILpISwaYikmMG~~G---L~~as~~AiLNaNYMakRLe~hYkil~~~~-~~~vaHEFIlD~r~fK~~agieav 868 (1001)
T KOG2040|consen 793 PWGSALILPISWAYIKMMGSGG---LKDASKIAILNANYMAKRLESHYKILFRGE-NGLVAHEFILDLRPFKKTAGIEAV 868 (1001)
T ss_pred CCCcceeehhHHHHHHHhcccc---cchhhHHHhhhhHHHHHHHhhccceeEecC-CcceeeeeeeechhhccccCCcHH
Confidence 111011 112233333333333 3444455556778899999885 3333333 2221 334553 46677
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEA 270 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~ 270 (272)
+...+| .++|.-.-..++.- .+.+-+-- +.+++|+|++++++-.
T Consensus 869 DvAKRL-~DYgFHaPTmswPV---~gtLMIEPTESE~k~ElDRfcdAliS 914 (1001)
T KOG2040|consen 869 DVAKRL-MDYGFHAPTMSWPV---AGTLMIEPTESEDKAELDRFCDALIS 914 (1001)
T ss_pred HHHHHH-HhccCCCCcccccc---CCceEeccCccccHHHHHHHHHHHHH
Confidence 877776 46687653333221 45555553 3357789998887643
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=92.49 E-value=5 Score=37.07 Aligned_cols=84 Identities=11% Similarity=0.071 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceE--EEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE
Q 036024 176 EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPY--VWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253 (272)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s 253 (272)
..++++.+++....-.|...|+..|-++... .+| +-+.+.+ ..++...+.+++ +|-++- + ..+.+-++
T Consensus 391 ~gL~~IArrvh~~T~~l~~~l~~aghel~~k--~fFDTLkI~~~~-s~~~~l~rA~~~-~iNlr~---~---ed~tigvs 460 (1001)
T KOG2040|consen 391 HGLKEIARRVHNLTLILAEGLKNAGHELQHK--PFFDTLKIRCGC-SAEEVLDRAAKR-QINLRL---V---EDGTIGVS 460 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhccc--cccceEEEEecC-cHHHHHHHHHhh-cCceEE---e---ecCceEEe
Confidence 6678899999999999999999888666553 244 3344444 566777776666 565532 1 25677788
Q ss_pred c--cCCHHHHHHHHHHHH
Q 036024 254 G--FGHRESILEASRRLE 269 (272)
Q Consensus 254 ~--~~~~~~i~~~l~~l~ 269 (272)
+ ..+++|++.++..+.
T Consensus 461 lDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 461 LDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ecccccHHHHHHHHHHHc
Confidence 7 346888998888764
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=90.13 E-value=0.22 Score=40.26 Aligned_cols=59 Identities=15% Similarity=0.204 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.+++|..+|..|++.-++..+|+.-. ...-..+..-......-.++.|+-|.|-.|
T Consensus 172 ~pd~leaiaaica~~diphivnnayglqs-ee~i~~iaa~~~~grida~vqsldknf~vp 230 (432)
T KOG3843|consen 172 SPDNLEAIAAICAAHDIPHIVNNAYGLQS-EECIHKIAAAAECGRIDAFVQSLDKNFMVP 230 (432)
T ss_pred CCchHHHHHHHHHccCchhhhccccccch-HHHHHHHHHHhhhccHHHHHHHhhhcceee
Confidence 45789999999999999999999997421 110011111111111225678999999754
No 395
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=88.85 E-value=1.2 Score=37.94 Aligned_cols=69 Identities=16% Similarity=0.133 Sum_probs=50.3
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEE-EecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIF-FCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~-~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+.+..+.++ ++....+.++.+|.+.++..|+..-.- ......+.|..++.+++++|++-|+++++-||-
T Consensus 23 ~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 23 YIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGSTEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHHhCCcEEEEEeecCCcceeeecCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 345667788 899999998889998877644322110 112234567789999999999999999999883
No 396
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=88.03 E-value=0.95 Score=38.08 Aligned_cols=68 Identities=19% Similarity=0.125 Sum_probs=48.9
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEE-ecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFF-CSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+.+..+.++ ++..+.+.++.+|.++++..|...-.-- .++ .+.|..++++++++|++.|+++|+-||-
T Consensus 21 ~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 21 TIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 345667788 9999999999899888666443211100 122 2445579999999999999999999883
No 397
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=87.11 E-value=1.3 Score=38.19 Aligned_cols=69 Identities=17% Similarity=0.192 Sum_probs=49.6
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEE------------EecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIF------------FCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~------------~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
..+..+.++ ++..+.+.++.+|.++++..|....+- ......|.|..++.+++++|++.|+++|+-|
T Consensus 23 ~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~V 102 (357)
T cd06563 23 FIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITV 102 (357)
T ss_pred HHHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEE
Confidence 345567788 889999998889998877644321110 0111335567899999999999999999998
Q ss_pred EE
Q 036024 82 IF 83 (272)
Q Consensus 82 i~ 83 (272)
|-
T Consensus 103 IP 104 (357)
T cd06563 103 IP 104 (357)
T ss_pred EE
Confidence 83
No 398
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=85.85 E-value=1.7 Score=37.34 Aligned_cols=65 Identities=15% Similarity=0.116 Sum_probs=49.0
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+.+..+.++ ++..+++.++.+|.++++..|...-. -...++..++.+++++|++.|+++++.||-
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~----ga~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 23 TIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKK----GAYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhc----cCcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 345566788 88999999998999987765542210 112346678999999999999999999983
No 399
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=85.40 E-value=2.4 Score=35.80 Aligned_cols=62 Identities=19% Similarity=0.227 Sum_probs=47.4
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
+.+..+.++ ++....+.++.+|.++++..|...- .. ..|..++.+++++|++.|+++|+.||
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~-----~g-~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 23 QLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQ-----KA-SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHHHHHHhCCeEEEEEEecCCCceeecCCCccccc-----cC-CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 345567788 8899999888899998776554221 11 13556899999999999999999888
No 400
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=83.01 E-value=0.68 Score=39.72 Aligned_cols=68 Identities=22% Similarity=0.273 Sum_probs=46.7
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+.+..+.++ ++..+++.++.+|.+++...+...-.--..++.+ |..++++++++|++.|+++|+-||-
T Consensus 23 ~id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 23 LIDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAYRPSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HHHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTESTTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HHHHHHHcCCcEEEEEEecCCCCccccCCCccccccCccccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 445667788 9999999988899988766543221111111113 4489999999999999999999883
No 401
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=82.24 E-value=3.8 Score=36.53 Aligned_cols=68 Identities=16% Similarity=0.227 Sum_probs=48.8
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceE--EE-----------E----ecC--CCccccCCCHHHHHHHHHHH
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDI--IF-----------F----CSP--NNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~--i~-----------~----~~p--~nptG~~~~~~~l~~l~~~~ 74 (272)
+.+..+.++ ++..+++.++.+|.++++..|...- -+ . ..+ ..+.+..++.+++++|++.|
T Consensus 27 ~Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA 106 (445)
T cd06569 27 LLDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYA 106 (445)
T ss_pred HHHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHH
Confidence 445567788 9999999999999998776543211 00 0 011 12345678999999999999
Q ss_pred HHcCCEEE
Q 036024 75 RNNGSIII 82 (272)
Q Consensus 75 ~~~~~~vi 82 (272)
+++++.||
T Consensus 107 ~~rgI~VI 114 (445)
T cd06569 107 KARHIEVI 114 (445)
T ss_pred HHcCCEEE
Confidence 99999988
No 402
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=74.37 E-value=5.4 Score=36.96 Aligned_cols=40 Identities=28% Similarity=0.433 Sum_probs=32.5
Q ss_pred cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024 53 SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC 95 (272)
Q Consensus 53 ~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~ 95 (272)
.|++.-| ++++++++++.|++.|+-||+|=+|..|..++.
T Consensus 205 Ap~sryG---tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 205 APTSRYG---TPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred cccccCC---CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 3444444 679999999999999999999999998766543
No 403
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=73.29 E-value=16 Score=24.73 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=42.0
Q ss_pred chHHhcccc-eeEEeecCCCCCcccC---CC-CCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPD---LK-GTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDS 85 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~d---l~-~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~ 85 (272)
|...++.+| +.+.. ..+++.... ++ .+.++.+|++. |+. .+-+-...+-+.|++++++++.=.
T Consensus 15 ~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~~aD~VIv~-----t~~-vsH~~~~~vk~~akk~~ip~~~~~ 82 (97)
T PF10087_consen 15 YKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIKKADLVIVF-----TDY-VSHNAMWKVKKAAKKYGIPIIYSR 82 (97)
T ss_pred HHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcCCCCEEEEE-----eCC-cChHHHHHHHHHHHHcCCcEEEEC
Confidence 888889999 77777 334344333 23 24677888773 333 244557889999999998887543
No 404
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=69.66 E-value=8 Score=36.04 Aligned_cols=37 Identities=24% Similarity=0.459 Sum_probs=29.6
Q ss_pred EecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 51 FCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 51 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
-++|+.|++. .++++++++.|++.|+-||+|-++-+.
T Consensus 218 ~~~p~~~~~~---~~efk~lV~~~H~~Gi~VilDvV~NH~ 254 (605)
T TIGR02104 218 STNPYDPATR---IRELKQMIQALHENGIRVIMDVVYNHT 254 (605)
T ss_pred hcCCCccchH---HHHHHHHHHHHHHCCCEEEEEEEcCCc
Confidence 3456666553 488999999999999999999998653
No 405
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=66.09 E-value=9.3 Score=28.34 Aligned_cols=68 Identities=21% Similarity=0.358 Sum_probs=42.5
Q ss_pred cccccccCcccchHHhcccc-eeEEeecCCCCCc-----ccC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGDLEDEVGKYC-NIEYLECGPGNNF-----FPD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~-----~~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
++|++.+.|.++...++..+ ++..+..+++... ..+ .+.++++.+++++ |+++--..++.|++.|
T Consensus 12 ~~V~~VG~f~P~~~~l~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~l~~aD~viiT------GsTlvN~Ti~~iL~~~ 85 (147)
T PF04016_consen 12 DKVGMVGYFQPLVEKLKERGAEVRVFDLNPDNIGEEPGDVPDEDAEEILPWADVVIIT------GSTLVNGTIDDILELA 85 (147)
T ss_dssp SEEEEES--HCCHHHHCCCCSEEEEEESSGGG--SSCT-EEGGGHHHHGGG-SEEEEE------CHHCCTTTHHHHHHHT
T ss_pred CEEEEEcCcHHHHHHHhcCCCCEEEEECCCCCCCCCCCcCCHHHHHHHHccCCEEEEE------eeeeecCCHHHHHHhC
Confidence 56889998877777777666 9999999873211 111 1115888999986 3333333399999999
Q ss_pred HHc
Q 036024 75 RNN 77 (272)
Q Consensus 75 ~~~ 77 (272)
++.
T Consensus 86 ~~~ 88 (147)
T PF04016_consen 86 RNA 88 (147)
T ss_dssp TTS
T ss_pred ccC
Confidence 843
No 406
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=63.03 E-value=9.8 Score=32.37 Aligned_cols=72 Identities=14% Similarity=0.215 Sum_probs=44.1
Q ss_pred CcccchHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 11 QAGDLEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 11 ~~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
-|+.|++.+.+-. .+++++...-...+.-...+..-|.+++-- |. .++.++.++|++.|++.++. +.|..+.
T Consensus 60 ~y~syEeLakd~~vDvVyi~~~~~qH~evv~l~l~~~K~VL~EK---Pl--a~n~~e~~~iveaA~~rgv~-~meg~~~ 132 (351)
T KOG2741|consen 60 AYGSYEELAKDPEVDVVYISTPNPQHYEVVMLALNKGKHVLCEK---PL--AMNVAEAEEIVEAAEARGVF-FMEGLWW 132 (351)
T ss_pred cccCHHHHhcCCCcCEEEeCCCCccHHHHHHHHHHcCCcEEecc---cc--cCCHHHHHHHHHHHHHcCcE-EEeeeee
Confidence 3455777777776 777777764434333322233334455533 33 35778999999999998844 4455443
No 407
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=60.71 E-value=19 Score=30.57 Aligned_cols=66 Identities=20% Similarity=0.170 Sum_probs=42.9
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEE-----------EecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIF-----------FCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~-----------~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
+.+..+.++ ++..+.+.+ +|.+.++..+...-.- ......+.+-.++.+++++|++.|+++|+-||
T Consensus 22 ~id~ma~~K~N~lhlHltD--~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 22 IIKTMSWYKMNDLQLHLND--NLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred HHHHHHHcCCceEEEeecC--CcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 345566778 888888875 5555544322211100 01112345667899999999999999999888
No 408
>smart00642 Aamy Alpha-amylase domain.
Probab=59.46 E-value=14 Score=28.08 Aligned_cols=27 Identities=26% Similarity=0.406 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||.|-+.-.
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 358999999999999999999988764
No 409
>PHA02678 hypothetical protein; Provisional
Probab=58.98 E-value=17 Score=23.84 Aligned_cols=54 Identities=13% Similarity=0.116 Sum_probs=32.3
Q ss_pred ceeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH----cCCEEEEcccCCc
Q 036024 23 CNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN----NGSIIIFDSAYAA 89 (272)
Q Consensus 23 g~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~----~~~~vi~D~~~~~ 89 (272)
|+.+.-|.+..-.++. .-..+.+.+++.||+ ..+|+..+.- ..+++++|-.+.+
T Consensus 26 gk~l~fps~nS~tf~~--~I~~d~~svLLVNPT-----------~~qLl~~~~~~~~~~~~~~~~~~~~~~ 83 (89)
T PHA02678 26 GRPLGPGSTPTMEYED--SVPRDARALLLVNPT-----------AGQLAAVAAGAPAGVRVLVLVDVARCD 83 (89)
T ss_pred CCCcCCCCCCceeecc--ccCcccceEEEECCC-----------HHHHHHhhcCCCCCcEEEEEEEeeeec
Confidence 3555555554322332 223688899998776 5556655532 2467788888875
No 410
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=57.79 E-value=28 Score=34.95 Aligned_cols=39 Identities=18% Similarity=0.350 Sum_probs=30.2
Q ss_pred EEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 48 IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 48 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.-+=++|++|.+. .++++++++.|++.|+-||.|-+|-+
T Consensus 541 ~~Ygtdp~dp~~r---i~EfK~LV~alH~~GI~VILDVVyNH 579 (1111)
T TIGR02102 541 GMYSEDPKDPELR---IAEFKNLINEIHKRGMGVILDVVYNH 579 (1111)
T ss_pred cccccCCcCcccc---HHHHHHHHHHHHHCCCEEEEeccccc
Confidence 3344456666553 48899999999999999999999864
No 411
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=57.44 E-value=23 Score=30.46 Aligned_cols=46 Identities=13% Similarity=0.122 Sum_probs=32.5
Q ss_pred CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 036024 40 LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDS 85 (272)
Q Consensus 40 l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~ 85 (272)
+.+.+.+..|+..-++.|.|.+|+.+++.++.+.++++|+.+-+=|
T Consensus 20 irQ~~Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~vIE 65 (351)
T PF03786_consen 20 IRQQPGVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLSVIE 65 (351)
T ss_dssp HCTSTTEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEEEEE
T ss_pred HHHhcCCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 4455678888888899999999999999999999999997766543
No 412
>COG3525 Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism]
Probab=56.48 E-value=24 Score=32.89 Aligned_cols=68 Identities=19% Similarity=0.221 Sum_probs=52.3
Q ss_pred hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEE-------------ecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFF-------------CSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~-------------~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
....+..+ +.-..++..+.+|.+.+...|+..-|-. ..| ++-|--++.++++++++.+..+++.+
T Consensus 284 Id~laa~Kln~~hlHLtddegwrleIk~~PkLT~iga~R~~de~~~Pq~g~~p-e~~ggfytqd~~relv~yAsar~Itv 362 (732)
T COG3525 284 IDQLAAHKLNVLHLHLTDDEGWRLEIKRYPKLTTIGAWRIPDEPDLPQLGYGP-ERMGGFYTQDDIRELVAYASARQITV 362 (732)
T ss_pred HHHHHHhhcceEEEeeccCcceeeccccCCccccccccccCCCcCCcccccCc-ccccCcccHHHHHHHHHHHhhcCcee
Confidence 34456677 8888999999999999888664332222 122 67788899999999999999999999
Q ss_pred EEc
Q 036024 82 IFD 84 (272)
Q Consensus 82 i~D 84 (272)
|.+
T Consensus 363 iPe 365 (732)
T COG3525 363 IPE 365 (732)
T ss_pred cCC
Confidence 966
No 413
>PLN03244 alpha-amylase; Provisional
Probab=55.57 E-value=21 Score=34.13 Aligned_cols=40 Identities=18% Similarity=0.226 Sum_probs=32.2
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 54 PNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 54 p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
.--|+...-++++++++++.|++.|+-||.|-+|..+..+
T Consensus 430 fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 430 FFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred ccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 3345555667899999999999999999999999765543
No 414
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=54.38 E-value=10 Score=31.76 Aligned_cols=25 Identities=32% Similarity=0.646 Sum_probs=21.3
Q ss_pred HHHHHHHHHH-HHcCCEEEEcccCCc
Q 036024 65 NQLEQLVEFA-RNNGSIIIFDSAYAA 89 (272)
Q Consensus 65 ~~l~~l~~~~-~~~~~~vi~D~~~~~ 89 (272)
.++++|++|| +..+..||.||+|.-
T Consensus 159 sRl~ql~~W~g~dfdgvivfDEcH~a 184 (303)
T PF13872_consen 159 SRLDQLVDWCGEDFDGVIVFDECHKA 184 (303)
T ss_pred chHHHHHHHHhcCCCceEEeccchhc
Confidence 5689999999 446899999999973
No 415
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=51.85 E-value=13 Score=23.22 Aligned_cols=29 Identities=28% Similarity=0.483 Sum_probs=22.1
Q ss_pred EEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 49 IFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 49 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
.+.....-|.|.+ +.+.++.|++++++|+
T Consensus 9 ~~~v~~~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 9 FYMVRIRIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp EEEEEEB-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred EEEEEEeCCCEEE-CHHHHHHHHHHHHHhC
Confidence 3344455577886 8899999999999987
No 416
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=50.65 E-value=41 Score=28.79 Aligned_cols=57 Identities=14% Similarity=0.234 Sum_probs=35.9
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccC
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIP 103 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~ 103 (272)
-+|+=+-++|.+ |...+.++..++++-+++.|.-+++|=.|+++..++. ...+..+.
T Consensus 40 ~vRlRvwv~P~~--~g~~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~~P~aW~ 97 (332)
T PF07745_consen 40 AVRLRVWVNPYD--GGYNDLEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQNKPAAWA 97 (332)
T ss_dssp EEEEEE-SS-TT--TTTTSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B--TTCT
T ss_pred eEEEEeccCCcc--cccCCHHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCCCCccCC
Confidence 345545555555 4668989999999999999999999999998776654 33334443
No 417
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=49.52 E-value=55 Score=20.39 Aligned_cols=59 Identities=12% Similarity=0.206 Sum_probs=34.9
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFD 84 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D 84 (272)
+...+++.| ++.......+ .++. +...+++.+|... ++ ++++++|.++.++-|-++|+|
T Consensus 10 ~~~~L~~~g~~v~~~~~~~~-----~l~~--~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRKPYE-----ALEA--DDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEecccHH-----HhCC--CCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 556667777 6554433211 2222 3344555555422 33 588999999998777777764
No 418
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=48.53 E-value=19 Score=29.79 Aligned_cols=28 Identities=21% Similarity=0.312 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
.++++++++.|+++|+.||+|-+.-+..
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhhccccccceEEEeeeccccc
Confidence 5899999999999999999998876433
No 419
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=47.74 E-value=36 Score=31.36 Aligned_cols=31 Identities=26% Similarity=0.374 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 61 AATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 61 ~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
.-++++++++++.|+++|+.||+|-++-+..
T Consensus 156 ~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 156 YGGPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 3356899999999999999999999987543
No 420
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=45.75 E-value=25 Score=31.74 Aligned_cols=28 Identities=18% Similarity=0.220 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.+++++|++.|+++|+.||+|-+.-+.
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~NH~ 106 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLNHK 106 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccc
Confidence 4689999999999999999999887543
No 421
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=45.64 E-value=29 Score=21.31 Aligned_cols=35 Identities=17% Similarity=0.421 Sum_probs=23.0
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 54 PNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 54 p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
+..|++..++.+++++..+-..+.+.+.+.++.|.
T Consensus 25 ~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Yk 59 (60)
T PF08672_consen 25 PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSYK 59 (60)
T ss_dssp -GGG--TT--HHHHHHHHHHHHHTTSEE--TTEEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEEe
Confidence 44577888999999999998888888888877763
No 422
>PLN02877 alpha-amylase/limit dextrinase
Probab=45.20 E-value=68 Score=31.73 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
...+++++++.|++.|+-||.|-+|-+..
T Consensus 464 RI~efk~mV~~lH~~GI~VImDVVyNHt~ 492 (970)
T PLN02877 464 RIIEFRKMVQALNRIGLRVVLDVVYNHLH 492 (970)
T ss_pred hHHHHHHHHHHHHHCCCEEEEEECCcccc
Confidence 34789999999999999999999997644
No 423
>COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism]
Probab=43.33 E-value=40 Score=29.34 Aligned_cols=40 Identities=23% Similarity=0.273 Sum_probs=32.4
Q ss_pred eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 036024 47 DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 47 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~ 86 (272)
|.+++...+.||-..-..+..+.|.++|+++|+..+.|.-
T Consensus 58 k~~~~~DH~vPt~~~~~a~~~~~lr~~~ke~Gi~~~~~~g 97 (423)
T COG0065 58 KTVATFDHNVPTPDIKAAEQQKELRENAKEFGIVNFYDVG 97 (423)
T ss_pred ceEEEecCCCCCccHHHHHHHHHHHHHHHHhCCeeeecCC
Confidence 4555557788888888888899999999999988877655
No 424
>TIGR02064 dsrA sulfite reductase, dissimilatory-type alpha subunit. This model describes the alpha subunit of sulfite reductase.
Probab=42.30 E-value=36 Score=29.94 Aligned_cols=37 Identities=19% Similarity=0.218 Sum_probs=31.3
Q ss_pred CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 43 TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 43 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
-|..+-.+..-.+-|.|..++.+.+++|++++++|+.
T Consensus 75 ~p~~~~~~tvRv~~P~G~~~tteqLR~LaDiaekYGs 111 (402)
T TIGR02064 75 FPGVAEFHTVRVAQPSGKFYSTDYLRQLCDVWEKYGS 111 (402)
T ss_pred CCCcCeEEEEEEecCCCCCCCHHHHHHHHHHHHHhCC
Confidence 3566677777778899999999999999999999963
No 425
>PLN02960 alpha-amylase
Probab=41.29 E-value=46 Score=32.39 Aligned_cols=38 Identities=18% Similarity=0.279 Sum_probs=31.1
Q ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 56 NPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 56 nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
-|++..-++++++++++.|++.|+-||.|-++..+..+
T Consensus 457 a~~~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d 494 (897)
T PLN02960 457 AVSSRFGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 494 (897)
T ss_pred CcccccCCHHHHHHHHHHHHHCCCEEEEEecccccCCc
Confidence 35555667899999999999999999999998765443
No 426
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=39.71 E-value=31 Score=22.73 Aligned_cols=23 Identities=26% Similarity=0.458 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCEEEEcccCCc
Q 036024 67 LEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
-++|.++|+++++.++.|..-..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LAr 51 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLVD 51 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHHH
Confidence 68999999999999999976543
No 427
>PRK12313 glycogen branching enzyme; Provisional
Probab=39.06 E-value=56 Score=30.76 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=27.0
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 60 HAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 60 ~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
..-++++++++++.|+++|+.||.|-++-+..
T Consensus 215 ~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~ 246 (633)
T PRK12313 215 RYGTPEDFMYLVDALHQNGIGVILDWVPGHFP 246 (633)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 34457899999999999999999998886543
No 428
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=38.85 E-value=53 Score=28.83 Aligned_cols=42 Identities=14% Similarity=0.339 Sum_probs=32.7
Q ss_pred CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 43 TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 43 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+++.++++++ .+--|..-+ .++++++|++.|.++++|---.+
T Consensus 141 l~~~~~vVLS--DY~KG~L~~---~q~~I~~ar~~~~pVLvDPKg~D 182 (467)
T COG2870 141 LKSFDALVLS--DYAKGVLTN---VQKMIDLAREAGIPVLVDPKGKD 182 (467)
T ss_pred hhcCCEEEEe--ccccccchh---HHHHHHHHHHcCCcEEECCCCcc
Confidence 4788999997 444577643 89999999999999999944433
No 429
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=38.69 E-value=51 Score=31.63 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=27.3
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 60 HAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 60 ~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
..-++++++++++.|+++|+.||.|-++....
T Consensus 295 ~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~ 326 (758)
T PLN02447 295 RSGTPEDLKYLIDKAHSLGLRVLMDVVHSHAS 326 (758)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 33457999999999999999999999987654
No 430
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=38.12 E-value=66 Score=19.56 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=29.8
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
..+.. +.+.||.+...+ ..-..+++..++++.++++++|.+.
T Consensus 20 ~if~a-L~~~~I~v~~~~------~Se~~is~~v~~~~~~~av~~Lh~~ 61 (64)
T cd04937 20 KIVGA-LSKEGIEILQTA------DSHTTISCLVSEDDVKEAVNALHEA 61 (64)
T ss_pred HHHHH-HHHCCCCEEEEE------cCccEEEEEEcHHHHHHHHHHHHHH
Confidence 44444 466699886433 2346788888899999999998765
No 431
>PLN00196 alpha-amylase; Provisional
Probab=37.82 E-value=40 Score=29.96 Aligned_cols=27 Identities=26% Similarity=0.342 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||.|-+.-+
T Consensus 90 t~~elk~Lv~~aH~~GIkVilDvV~NH 116 (428)
T PLN00196 90 NEAQLKSLIEAFHGKGVQVIADIVINH 116 (428)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccC
Confidence 458899999999999999999987754
No 432
>cd04908 ACT_Bt0572_1 N-terminal ACT domain of a novel protein composed almost entirely of two tandem ACT domains. Included in this CD is the N-terminal ACT domain of a novel protein composed almost entirely of two tandem ACT domains as seen in the uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related ACT domains. These tandem ACT domain proteins belong to the superfamily of ACT regulatory domains.
Probab=37.41 E-value=97 Score=18.88 Aligned_cols=40 Identities=20% Similarity=0.081 Sum_probs=21.3
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHH
Q 036024 225 FAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEAS 265 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l 265 (272)
...++.++|+-+.....+...+...+|+.+ ...+...+.+
T Consensus 18 v~~~l~~~~inI~~i~~~~~~~~~~~rl~~-~~~~~~~~~L 57 (66)
T cd04908 18 VTEILSEAGINIRALSIADTSEFGILRLIV-SDPDKAKEAL 57 (66)
T ss_pred HHHHHHHCCCCEEEEEEEecCCCCEEEEEE-CCHHHHHHHH
Confidence 345566668877544333333357788876 3333443333
No 433
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=37.01 E-value=34 Score=29.47 Aligned_cols=20 Identities=25% Similarity=0.323 Sum_probs=17.3
Q ss_pred HHHHHHHHHHcCCEEEEccc
Q 036024 67 LEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~ 86 (272)
--+|.++|++||+.+++|-.
T Consensus 298 AlkIreiA~e~~Ipi~enpp 317 (363)
T COG1377 298 ALKIREIAKEHGIPIIENPP 317 (363)
T ss_pred HHHHHHHHHHcCCceecChH
Confidence 46899999999999999944
No 434
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=36.94 E-value=26 Score=30.32 Aligned_cols=20 Identities=30% Similarity=0.350 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCEEEEccc
Q 036024 67 LEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~ 86 (272)
-.+|.++|++||+.+++|-.
T Consensus 300 A~~Ir~~A~e~~VPiven~p 319 (358)
T PRK13109 300 ALKIREIAEENGIPVIEDKP 319 (358)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 58899999999999999944
No 435
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=36.93 E-value=61 Score=30.36 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=26.8
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 60 HAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 60 ~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
..-++++++++++.|++.|+.||.|-++-+..
T Consensus 201 ~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~ 232 (613)
T TIGR01515 201 RFGTPDDFMYFVDACHQAGIGVILDWVPGHFP 232 (613)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecccCcC
Confidence 44457899999999999999999998886543
No 436
>PF14085 DUF4265: Domain of unknown function (DUF4265)
Probab=35.84 E-value=1.6e+02 Score=20.81 Aligned_cols=44 Identities=18% Similarity=0.345 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHh
Q 036024 187 ENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEK 231 (272)
Q Consensus 187 ~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~ 231 (272)
+..+.+++.|+++|..+-.... .++.+++|...+-+....+|.+
T Consensus 65 ~~~~~v~~~l~~lG~~~E~~~~-~~lav~VP~~~~~~~i~~~L~~ 108 (117)
T PF14085_consen 65 DDIEAVREELEALGCTVEGFSE-RMLAVDVPPSVDFDAIKDYLDR 108 (117)
T ss_pred hhHHHHHHHHHHcCCeEEccCC-CEEEEEECCCCCHHHHHHHHHh
Confidence 4566777888888888877655 7788899855444444444443
No 437
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=35.77 E-value=93 Score=26.34 Aligned_cols=41 Identities=22% Similarity=0.485 Sum_probs=27.8
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
+..+++++ -+=|.| ++.+...+|+++|++.++.+++|.+..
T Consensus 129 ~~d~Vvls-GSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 129 SDDIVVLS-GSLPPG--VPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred cCCEEEEe-CCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 33444444 344555 466778888888888888888887654
No 438
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=35.69 E-value=94 Score=19.16 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=29.6
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+.+..| .+.||.+..-+ .+..-.++++..++++.+++++.|.+.
T Consensus 20 ki~~~L-~~~~I~v~~i~----~~~s~~~is~~V~~~~~~~av~~Lh~~ 63 (66)
T cd04915 20 RGLAAL-AEAGIEPIAAH----QSMRNVDVQFVVDRDDYDNAIKALHAA 63 (66)
T ss_pred HHHHHH-HHCCCCEEEEE----ecCCeeEEEEEEEHHHHHHHHHHHHHH
Confidence 444444 55588873211 113457899878899999999999875
No 439
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=35.26 E-value=75 Score=19.38 Aligned_cols=42 Identities=10% Similarity=0.045 Sum_probs=29.1
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
..+..| .+.+|.+..- +..-.++++..++++.++++++|.+.
T Consensus 19 ~~~~~L-~~~~i~~i~~------~~s~~~is~vv~~~d~~~av~~LH~~ 60 (63)
T cd04920 19 PALEVF-GKKPVHLVSQ------AANDLNLTFVVDEDQADGLCARLHFQ 60 (63)
T ss_pred HHHHHH-hcCCceEEEE------eCCCCeEEEEEeHHHHHHHHHHHHHH
Confidence 444444 4557777432 23457899878899999999999875
No 440
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=34.80 E-value=29 Score=23.19 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCEEEEcccCC
Q 036024 67 LEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
-++|++.|++|++.+..|..-.
T Consensus 34 Ae~II~~Ake~~Vpi~edp~Lv 55 (92)
T COG2257 34 AEKIIEKAKEHGVPIQEDPLLV 55 (92)
T ss_pred HHHHHHHHHHcCCCcccCHHHH
Confidence 6999999999999999997654
No 441
>PRK05402 glycogen branching enzyme; Provisional
Probab=34.60 E-value=72 Score=30.62 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=28.0
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 57 PTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 57 ptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
|....-++++++++++.|++.|+.||.|-++-+.
T Consensus 307 i~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~ 340 (726)
T PRK05402 307 PTSRFGTPDDFRYFVDACHQAGIGVILDWVPAHF 340 (726)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 3344456799999999999999999999888654
No 442
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=34.45 E-value=61 Score=31.86 Aligned_cols=54 Identities=17% Similarity=0.231 Sum_probs=37.2
Q ss_pred CcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 35 NFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 35 ~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
+|..|+-.---+..-|-++|+ |. -...+++++++.|++.|+.||.|-+|-+...
T Consensus 378 NWGYDP~~y~aPegSYatdp~---g~-~Ri~Efk~mV~alH~~Gi~VIlDVVyNHt~~ 431 (898)
T TIGR02103 378 NWGYDPFHYTVPEGSYATDPE---GP-ARIKEFREMVQALNKTGLNVVMDVVYNHTNA 431 (898)
T ss_pred CCCCCCcccCCcChhhccCCC---Cc-hHHHHHHHHHHHHHHCCCEEEEEeecccccc
Confidence 577775543334444555553 32 2457899999999999999999999976443
No 443
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=34.24 E-value=54 Score=26.61 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=30.3
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC-EEEEcccCC
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS-IIIFDSAYA 88 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~-~vi~D~~~~ 88 (272)
++++|-+ |.+.+.+..+.+++.+++++. .+++|-+..
T Consensus 67 ~~~aiki-------G~l~~~~~~~~i~~~~~~~~~~~vVlDPv~~ 104 (254)
T TIGR00097 67 PVDAAKT-------GMLASAEIVEAVARKLREYPVRPLVVDPVMV 104 (254)
T ss_pred CCCEEEE-------CCcCCHHHHHHHHHHHHhcCCCcEEECCccc
Confidence 4566664 898899999999999999998 699997643
No 444
>PF13113 DUF3970: Protein of unknown function (DUF3970)
Probab=34.12 E-value=58 Score=19.87 Aligned_cols=20 Identities=25% Similarity=0.308 Sum_probs=14.9
Q ss_pred EEEccCCHHHHHHHHHHHHH
Q 036024 251 RISGFGHRESILEASRRLEA 270 (272)
Q Consensus 251 R~s~~~~~~~i~~~l~~l~~ 270 (272)
|+-+..+++||.++++.|.+
T Consensus 3 qVRl~G~~eEi~~fi~~~~~ 22 (60)
T PF13113_consen 3 QVRLSGTKEEIEEFIKSFEK 22 (60)
T ss_pred eEEecCCHHHHHHHHHhhhh
Confidence 34445678899999988865
No 445
>TIGR03793 TOMM_pelo TOMM propeptide domain. This model represents a domain that is conserved among a large number of putative thiazole/oxazole-modified microcins (TOMM). Oddly, most of this seqence region appears homologous to nitrile hydratase subunits. This family is expanded especially in Pelotomaculum thermopropionicum SI.
Probab=34.00 E-value=69 Score=20.84 Aligned_cols=25 Identities=24% Similarity=0.501 Sum_probs=19.6
Q ss_pred ceEEEEecCCCccccCCCHHHHHHHH
Q 036024 46 TDIIFFCSPNNPTGHAATQNQLEQLV 71 (272)
Q Consensus 46 ~~~i~~~~p~nptG~~~~~~~l~~l~ 71 (272)
+...++.-|.+|.| -++.++|.+++
T Consensus 51 ~~~~~lVlP~~P~~-~lse~~L~~va 75 (77)
T TIGR03793 51 PTVLYLVLPVNPDI-ELTDEQLDAVA 75 (77)
T ss_pred CCeEEEEecCCCCC-CCCHHHHHHhh
Confidence 44566777999999 88988887765
No 446
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. Two classes of GATase domains have been identified [, ]: class-I (also known as trpG-type or triad) and class-II (also known as purF-type or Ntn). Class-I (or type 1) GATase domains have been found in the following enzymes: The second component of anthranilate synthase (AS) []. AS catalyzes the biosynthesis of anthranilate from chorismate and glutamine. AS is generally a dimeric enzyme: the first component can synthesize anthranilate using ammonia rather than glutamine, whereas component II provides the GATase activity []. In some bacteria and in fungi the GATase component of AS is part of a multifunctional protein that also catalyzes other steps of the biosynthesis of tryptophan. The second component of 4-amino-4-deoxychorismate (ADC) synthase, a dimeric prokaryotic enzyme that functions in the pathway that catalyzes the biosynthesis of para-aminobenzoate (PABA) from chorismate and glutamine. The second component (gene pabA) provides the GATase activity []. CTP synthase. CTP synthase catalyzes the final reaction in the biosynthesis of pyrimidine, the ATP-dependent formation of CTP from UTP and glutamine. CTP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the C-terminal section []. GMP synthase (glutamine-hydrolyzing). GMP synthase catalyzes the ATP-dependent formation of GMP from xanthosine 5'-phosphate and glutamine. GMP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the N-terminal section [, ]. Glutamine-dependent carbamoyl-phosphate synthase (GD-CPSase); an enzyme involved in both arginine and pyrimidine biosynthesis and which catalyzes the ATP-dependent formation of carbamoyl phosphate from glutamine and carbon dioxide. In bacteria GD-CPSase is composed of two subunits: the large chain (gene carB) provides the CPSase activity, while the small chain (gene carA) provides the GATase activity. In yeast the enzyme involved in arginine biosynthesis is also composed of two subunits: CPA1 (GATase), and CPA2 (CPSase). In most eukaryotes, the first three steps of pyrimidine biosynthesis are catalyzed by a large multifunctional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals). The GATase domain is located at the N-terminal extremity of this polyprotein []. Phosphoribosylformylglycinamidine synthase, an enzyme that catalyzes the fourth step in the de novo biosynthesis of purines. In some species of bacteria and rchaea, FGAM synthase II is composed of two subunits: a small chain (gene purQ) which provides the GATase activity and a large chain (gene purL) which provides the aminator activity. In eukaryotes and Gram-negative bacteria a single polypeptide (large type of purL) contains a FGAM synthethase domain and the GATase as the C-terminal domain []. Imidazole glycerol phosphate synthase subunit hisH, an enzyme that catalyzes the fifth step in the biosynthesis of histidine. A triad of conserved Cys-His-Glu forms the active site, wherein the catalytic cysteine is essential for the amidotransferase activity [, ]. Different structures show that the active site Cys of type 1 GATase is located at the tip of a nucleophile elbow.; PDB: 1I7S_D 1I7Q_D 3UOW_B 1GPM_C 1O1Y_A 2VXO_A 2VPI_B 1OX5_B 1OX6_B 1OX4_B ....
Probab=33.85 E-value=61 Score=24.83 Aligned_cols=62 Identities=18% Similarity=0.193 Sum_probs=43.1
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
..+.++..| ++..++.+.+..-..+ .+.+...++++ .|.++.- .+...++++.+.+.+..++
T Consensus 13 l~~~l~~~~~~~~v~~~~~~~~~~~~--~~~~~d~iii~Gg~~~~~d----~~~~~~~i~~~~~~~~Pil 76 (192)
T PF00117_consen 13 LVRALRELGIDVEVVRVDSDFEEPLE--DLDDYDGIIISGGPGSPYD----IEGLIELIREARERKIPIL 76 (192)
T ss_dssp HHHHHHHTTEEEEEEETTGGHHHHHH--HTTTSSEEEEECESSSTTS----HHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHCCCeEEEEECCCchhhhhh--hhcCCCEEEECCcCCcccc----ccccccccccccccceEEE
Confidence 567778888 8888887753111111 24677888888 7777765 5678888888888787776
No 447
>PRK10785 maltodextrin glucosidase; Provisional
Probab=33.32 E-value=50 Score=30.81 Aligned_cols=27 Identities=15% Similarity=0.311 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.+++++|++.|++.|+.||+|-++-+
T Consensus 224 t~~df~~Lv~~aH~rGikVilD~V~NH 250 (598)
T PRK10785 224 GDAALLRLRHATQQRGMRLVLDGVFNH 250 (598)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 357899999999999999999988653
No 448
>PLN02361 alpha-amylase
Probab=33.01 E-value=52 Score=28.97 Aligned_cols=27 Identities=11% Similarity=0.126 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.+|.|-+.-+
T Consensus 74 t~~el~~li~~~h~~gi~vi~D~V~NH 100 (401)
T PLN02361 74 SEHLLKSLLRKMKQYNVRAMADIVINH 100 (401)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEcccc
Confidence 468999999999999999999977643
No 449
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=32.50 E-value=58 Score=25.83 Aligned_cols=65 Identities=12% Similarity=0.164 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL 135 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~ 135 (272)
.+..+++.++|++|++.+++++-...-. .+.++..+.+- | .-+.-..|.++ +++.+|+-+-+.+.
T Consensus 51 ~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGVHlGq~----D--~~~~~ar~~~~-~~~iIG~S~h~~ee 116 (211)
T COG0352 51 LALAEKLRALCQKYGVPLIINDRVDLALAVGADGVHLGQD----D--MPLAEARELLG-PGLIIGLSTHDLEE 116 (211)
T ss_pred HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEEEcCCc----c--cchHHHHHhcC-CCCEEEeecCCHHH
Confidence 4567899999999999999997665211 11111111111 1 11223456776 88888876654444
No 450
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=32.34 E-value=53 Score=26.70 Aligned_cols=57 Identities=21% Similarity=0.217 Sum_probs=36.8
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccC--CCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA--ATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~--~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
....++..| +.+.+|+..+ .+. +.+|.+.. -..+.++++++.|+++|+.+|+|-...
T Consensus 26 ~~~~~~~~G~n~VRi~v~~~-~~~----------------~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~ 85 (281)
T PF00150_consen 26 DFDQLKALGFNTVRIPVGWE-AYQ----------------EPNPGYNYDETYLARLDRIVDAAQAYGIYVILDLHNA 85 (281)
T ss_dssp HHHHHHHTTESEEEEEEEST-STS----------------TTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEES
T ss_pred HHHHHHHCCCCEEEeCCCHH-Hhc----------------CCCCCccccHHHHHHHHHHHHHHHhCCCeEEEEeccC
Confidence 556778888 8888888753 222 11111100 122568999999999999999986654
No 451
>PRK09108 type III secretion system protein HrcU; Validated
Probab=31.88 E-value=33 Score=29.60 Aligned_cols=20 Identities=20% Similarity=0.082 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCEEEEccc
Q 036024 67 LEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~ 86 (272)
-.+|.++|+++|+.+++|-.
T Consensus 293 A~~Ir~~A~e~~VPvven~p 312 (353)
T PRK09108 293 ALALRRHAHALGIPIVGNPP 312 (353)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 58899999999999999944
No 452
>PRK14706 glycogen branching enzyme; Provisional
Probab=31.66 E-value=84 Score=29.67 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=28.3
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 57 PTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 57 ptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
|+...-++++++++++.|++.|+-||.|-++..+.
T Consensus 209 ~~~~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~ 243 (639)
T PRK14706 209 PTSRLGTPEDFKYLVNHLHGLGIGVILDWVPGHFP 243 (639)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEecccccC
Confidence 33444457999999999999999999998887543
No 453
>PRK14705 glycogen branching enzyme; Provisional
Probab=31.66 E-value=77 Score=32.34 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=30.5
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 55 NNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 55 ~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
.-|++..-++++++++++.|++.|+-||+|=++.++.
T Consensus 805 ~ap~~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~ 841 (1224)
T PRK14705 805 FAPTSRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFP 841 (1224)
T ss_pred CCcCcccCCHHHHHHHHHHHHHCCCEEEEEeccccCC
Confidence 3355555578999999999999999999999987653
No 454
>COG2923 DsrF Uncharacterized protein involved in the oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=31.59 E-value=64 Score=22.84 Aligned_cols=42 Identities=19% Similarity=0.326 Sum_probs=30.6
Q ss_pred EEEecCCCccccCCCHHHHHHHHHH---HHHcCCEEEEcccCCcc
Q 036024 49 IFFCSPNNPTGHAATQNQLEQLVEF---ARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 49 i~~~~p~nptG~~~~~~~l~~l~~~---~~~~~~~vi~D~~~~~~ 90 (272)
+.+..-+.|-|..+..+-++.+... +.+.++++|.|.+++-.
T Consensus 4 ~afvf~~aP~Gs~~~rEgLda~la~~a~~~~~~vffi~DGV~~L~ 48 (118)
T COG2923 4 LAFVFRTAPHGSEAGREGLDAALATSAFSLETGVFFIGDGVFQLL 48 (118)
T ss_pred EEEEEecCCCccHHHHhHHHHHHHHhhcccccceEEEccchhhhc
Confidence 3344456688998888888777654 34568999999999853
No 455
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism]
Probab=31.55 E-value=3.4e+02 Score=23.36 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=26.8
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
.+.++=++-| +.+.-+++.+++++.++++|.|=.|.
T Consensus 49 G~dIVRvtv~--------~~e~A~A~~~Ik~~~~vPLVaDiHf~ 84 (361)
T COG0821 49 GCDIVRVTVP--------DMEAAEALKEIKQRLNVPLVADIHFD 84 (361)
T ss_pred CCCEEEEecC--------CHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 3455555433 34678899999999999999997765
No 456
>PF15366 DUF4597: Domain of unknown function (DUF4597)
Probab=31.01 E-value=26 Score=20.87 Aligned_cols=14 Identities=29% Similarity=0.593 Sum_probs=10.2
Q ss_pred ecCCCccccCCCHH
Q 036024 52 CSPNNPTGHAATQN 65 (272)
Q Consensus 52 ~~p~nptG~~~~~~ 65 (272)
+.|-.|||+.++.+
T Consensus 27 iTPPTPTg~~lpRD 40 (62)
T PF15366_consen 27 ITPPTPTGMMLPRD 40 (62)
T ss_pred ecCCCCCceecccc
Confidence 34667999998833
No 457
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=30.81 E-value=37 Score=29.71 Aligned_cols=21 Identities=5% Similarity=0.044 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCEEEEcccC
Q 036024 67 LEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~ 87 (272)
-.+|.++|++||+.+++|-.-
T Consensus 298 A~~Ir~~A~e~~VPiven~pL 318 (386)
T PRK12468 298 ALRIRELGAEHRIPLLEAPPL 318 (386)
T ss_pred HHHHHHHHHHcCCcEEeCHHH
Confidence 588999999999999999543
No 458
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=30.68 E-value=1.5e+02 Score=19.48 Aligned_cols=35 Identities=11% Similarity=0.216 Sum_probs=24.0
Q ss_pred CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 43 TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 43 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
.+...+|+++.|+. ++..+.++-+++|++.++.++
T Consensus 23 ~~~~g~ivVTTPq~-----la~~dv~r~~~~~~~~~vpil 57 (81)
T PF10609_consen 23 LPIDGAIVVTTPQE-----LALADVRRAIDMFRKLNVPIL 57 (81)
T ss_dssp H--SEEEEEE-CCC-------HHHHHHHHHHHHCTT-EEE
T ss_pred CCCCeEEEEeCCHH-----HHHHHHHHHHHHHHhcCCCcE
Confidence 46667899988874 466779999999999988765
No 459
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.65 E-value=2.4e+02 Score=23.49 Aligned_cols=15 Identities=7% Similarity=0.060 Sum_probs=10.3
Q ss_pred HHHHHHHhcCeEeeC
Q 036024 224 VFAEILEKTHITTVP 238 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~ 238 (272)
.+..+.+++|+.+..
T Consensus 186 af~Y~~~~yGl~~~~ 200 (287)
T cd01137 186 AFSYFAKAYGLKEAY 200 (287)
T ss_pred cHHHHHHHcCCeEee
Confidence 356677788887654
No 460
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=30.54 E-value=35 Score=29.50 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
.+++++|+++|++++..+++|=.-.
T Consensus 46 ~~~~~~l~~~a~~~~~~v~~Disp~ 70 (357)
T PF05913_consen 46 LERLKELLKLAKELGMEVIADISPK 70 (357)
T ss_dssp HHHHHHHHHHHHHCT-EEEEEE-CC
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHH
Confidence 3778999999999999999997644
No 461
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=30.51 E-value=67 Score=26.00 Aligned_cols=39 Identities=18% Similarity=0.332 Sum_probs=28.6
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.++++|.+ |.+.+.+.++.|.++.++++..+|+|-+..+
T Consensus 59 ~~~~aiki-------G~l~~~~~v~~i~~~l~~~~~~vV~DPVm~~ 97 (246)
T PF08543_consen 59 MKFDAIKI-------GYLGSAEQVEIIADFLKKPKIPVVLDPVMGD 97 (246)
T ss_dssp SC-SEEEE--------S-SSHHHHHHHHHHHHHTTTEEEEE---EE
T ss_pred ccccEEEE-------cccCCchhhhhHHHHHhccCCCEEEeccccc
Confidence 46677776 8888999999999999989999999988764
No 462
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=30.42 E-value=1.3e+02 Score=26.40 Aligned_cols=41 Identities=12% Similarity=0.124 Sum_probs=34.7
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D 84 (272)
.....|+..-++-|.|.+|+.++++++.+.++++|+.+=+=
T Consensus 22 ~G~~giV~al~~~p~gevW~~~~i~~~k~~ie~~GL~~~vv 62 (394)
T TIGR00695 22 AGATGIVTALHHIPNGEVWEKEEIRKRKEYIESAGLHWSVV 62 (394)
T ss_pred cCCcceeecCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 56677777778889999999999999999999998776553
No 463
>TIGR02050 gshA_cyan_rel uncharacterized enzyme. This family represents a division of a larger family, the other branch of which is predicted to act as glutamate--cysteine ligase (the first of two enzymes in glutathione biosynthesis) in the cyanobacteria. Species containing this protein, however, are generally not believe to make glutathione, and the function is unknown.
Probab=30.28 E-value=2.1e+02 Score=23.81 Aligned_cols=90 Identities=10% Similarity=0.128 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc
Q 036024 176 EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF 255 (272)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~ 255 (272)
..+.+.++.+.+.++.+.+.+++.|..+......++.-..-....+..-...+.+++|-...-.-.| .-++-+++
T Consensus 55 ~~~~~l~~~l~~~~~~l~~~a~~~g~~l~~~G~hP~~~~~~~~~~~~~RY~~m~~~~g~~~~~~~~~----g~hVhv~v- 129 (287)
T TIGR02050 55 TTLAEAAAQIRAVRARLVQAASDHGLRICGAGTHPFARWRRQEVADNPRYQRLLERYGYVARQQLVF----GLHVHVGV- 129 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCccCCCCcHHHHHHHHHHHHHHHHhHcee----eEEEEeCC-
Confidence 4567888999999999999999999888764332331111113344555666666655321111111 12333443
Q ss_pred CCHHHHHHHHHHHHH
Q 036024 256 GHRESILEASRRLEA 270 (272)
Q Consensus 256 ~~~~~i~~~l~~l~~ 270 (272)
.+.++..+.+.++..
T Consensus 130 ~d~~~~i~~~n~l~~ 144 (287)
T TIGR02050 130 PSPDDAVAVLNRLLP 144 (287)
T ss_pred CCHHHHHHHHHHHHH
Confidence 257777777776653
No 464
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.28 E-value=2.2e+02 Score=23.60 Aligned_cols=53 Identities=21% Similarity=0.264 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC--Ce--EecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024 179 HSVVDYYKENTKILIDTLASLG--IK--VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP 238 (272)
Q Consensus 179 ~~~~~~~~~~~~~l~~~L~~~g--~~--~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~ 238 (272)
.+..+.|++|.+.+.+.|.++. ++ +.....-.++ ... ..+..+++++|+.+.+
T Consensus 146 P~~~~~y~~N~~~~~~~L~~l~~~~~~~~~~~~~~~~v--~~H-----~af~Yl~~~~gl~~~~ 202 (286)
T cd01019 146 PDNAATYAANLEAFNARLAELDATIKERLAPVKTKPFF--VFH-----DAYGYFEKRYGLTQAG 202 (286)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEE--Eec-----ccHHHHHHHcCCceee
Confidence 4455677777777777776652 11 1111111122 221 2466778888887643
No 465
>cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Bacterial Aconitase-like catalytic domain. Aconitase (aconitate hydratase or citrate hydrolyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediate product during the course of the reaction. This distinct subfamily is found only in bacteria and Archaea. Its exact characteristics are not known.
Probab=30.14 E-value=1.8e+02 Score=25.43 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=26.4
Q ss_pred eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 47 DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 47 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
+.+++...+-|+...-..+..+.+.++|+++++.++
T Consensus 29 ~~~~~~DH~~p~~~~~~a~~~~~lr~~a~~~gi~~~ 64 (380)
T cd01585 29 LSVSYVDHNTLQTDFENADDHRFLQTVAARYGIYFS 64 (380)
T ss_pred CeEEEeCCCCCCCChHHHHHHHHHHHHHHHcCCEEE
Confidence 555555566666655566788999999999998644
No 466
>PRK08156 type III secretion system protein SpaS; Validated
Probab=29.81 E-value=34 Score=29.61 Aligned_cols=21 Identities=14% Similarity=0.170 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCEEEEcccC
Q 036024 67 LEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~ 87 (272)
-.+|.++|++||+.+++|-.-
T Consensus 286 A~~IreiA~e~~VPiven~pL 306 (361)
T PRK08156 286 ALAVRAYAEKVGVPVVRDIKL 306 (361)
T ss_pred HHHHHHHHHHCCCCEeeCHHH
Confidence 588999999999999999443
No 467
>KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms]
Probab=29.53 E-value=1.3e+02 Score=22.05 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=22.4
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D 84 (272)
.+-|-++..+|+|.| +...++-.++||+..++-
T Consensus 15 ~~MrFLIThnPtnaT--------ln~fieELkKygvttvVR 47 (173)
T KOG2836|consen 15 KNMRFLITHNPTNAT--------LNKFIEELKKYGVTTVVR 47 (173)
T ss_pred cceEEEEecCCCchh--------HHHHHHHHHhcCCeEEEE
Confidence 344555555676665 777777778899887753
No 468
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=28.55 E-value=1.6e+02 Score=28.14 Aligned_cols=40 Identities=15% Similarity=0.365 Sum_probs=31.7
Q ss_pred eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 47 DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 47 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
..-|.++|. |.+.+ .+++.+++.+++.|+-||.|-+|=+-
T Consensus 251 ~~~Yss~p~-p~~~i---~EfK~mV~~lHkaGI~VILDVVfNHT 290 (697)
T COG1523 251 EGRYASNPE-PATRI---KEFKDMVKALHKAGIEVILDVVFNHT 290 (697)
T ss_pred CccccCCCC-cchHH---HHHHHHHHHHHHcCCEEEEEEeccCc
Confidence 345666666 66655 67999999999999999999999653
No 469
>PRK03906 mannonate dehydratase; Provisional
Probab=28.38 E-value=1.4e+02 Score=26.14 Aligned_cols=40 Identities=10% Similarity=-0.033 Sum_probs=34.7
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
..+..|+..-++-|.|.+|+.+++.++.+.++++|+.+=+
T Consensus 22 ~G~~~iv~~l~~~~~g~~W~~~~i~~~~~~ie~~Gl~~~v 61 (385)
T PRK03906 22 PGATGIVTALHDIPVGEVWPVEEILARKAEIEAAGLEWSV 61 (385)
T ss_pred CCCCceeecCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 6677787777889999999999999999999999876655
No 470
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]
Probab=27.83 E-value=81 Score=25.98 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=27.5
Q ss_pred ccccCCCHHHHHHHHHHHHHcC-CEEEEcccCC
Q 036024 57 PTGHAATQNQLEQLVEFARNNG-SIIIFDSAYA 88 (272)
Q Consensus 57 ptG~~~~~~~l~~l~~~~~~~~-~~vi~D~~~~ 88 (272)
=||++.+.+-++.+++..++++ ..+|+|-+..
T Consensus 77 KtGML~~~eiie~va~~l~~~~~~~vV~DPVmv 109 (263)
T COG0351 77 KTGMLGSAEIIEVVAEKLKKYGIGPVVLDPVMV 109 (263)
T ss_pred EECCcCCHHHHHHHHHHHHhcCCCcEEECceEE
Confidence 4699999999999999999998 7788887764
No 471
>PRK09505 malS alpha-amylase; Reviewed
Probab=26.78 E-value=76 Score=30.19 Aligned_cols=29 Identities=31% Similarity=0.379 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|+++|+.||+|-+.-+..
T Consensus 290 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 318 (683)
T PRK09505 290 TEADLRTLVDEAHQRGIRILFDVVMNHTG 318 (683)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCCc
Confidence 46899999999999999999998775433
No 472
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=26.48 E-value=78 Score=29.15 Aligned_cols=26 Identities=27% Similarity=0.418 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
+.++++++++.|+++|+.||+|-+.-
T Consensus 73 t~~~~~~lv~~ah~~gi~vilD~v~N 98 (543)
T TIGR02403 73 TMADFEELVSEAKKRNIKIMLDMVFN 98 (543)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 45899999999999999999996654
No 473
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=26.45 E-value=38 Score=17.68 Aligned_cols=10 Identities=50% Similarity=0.860 Sum_probs=8.3
Q ss_pred cCCCccccCC
Q 036024 53 SPNNPTGHAA 62 (272)
Q Consensus 53 ~p~nptG~~~ 62 (272)
++.||+|..+
T Consensus 19 s~~~P~G~~W 28 (32)
T PF06462_consen 19 SPSNPEGTSW 28 (32)
T ss_pred CCCCCCCCCc
Confidence 7899999875
No 474
>PRK12568 glycogen branching enzyme; Provisional
Probab=26.17 E-value=1.1e+02 Score=29.32 Aligned_cols=32 Identities=19% Similarity=0.290 Sum_probs=27.2
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 61 AATQNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 61 ~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
.-++++++++++.|++.|+-||.|-++..+..
T Consensus 315 ~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~ 346 (730)
T PRK12568 315 HGSPDGFAQFVDACHRAGIGVILDWVSAHFPD 346 (730)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeccccCCc
Confidence 34578999999999999999999999876543
No 475
>PF11909 NdhN: NADH-quinone oxidoreductase cyanobacterial subunit N; InterPro: IPR020874 NAD(P)H-quinone oxidoreductase (NDH-1) shuttles electrons from an unknown electron donor, via FMN and iron-sulphur (Fe-S) centres, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. It couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. NDH-1 can be composed of about 15 different subunits, although different subcomplexes with different compositions have been identified which probably have different functions. This entry represents subunit N. ; GO: 0016655 oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor, 0055114 oxidation-reduction process, 0016020 membrane
Probab=26.08 E-value=1.9e+02 Score=21.42 Aligned_cols=26 Identities=15% Similarity=0.386 Sum_probs=21.1
Q ss_pred cccCCCHHHHHHHHHHHHHc-CCEEEE
Q 036024 58 TGHAATQNQLEQLVEFARNN-GSIIIF 83 (272)
Q Consensus 58 tG~~~~~~~l~~l~~~~~~~-~~~vi~ 83 (272)
-|.++|..+++-|+.+|++. .+.||+
T Consensus 112 EG~vLS~~El~~L~~Lp~~ePrvKvVv 138 (154)
T PF11909_consen 112 EGQVLSRQELEYLCNLPQREPRVKVVV 138 (154)
T ss_pred eccccCHHHHHHHHhccccCCCeEEEE
Confidence 48899999999999999765 555554
No 476
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=25.67 E-value=92 Score=24.44 Aligned_cols=33 Identities=33% Similarity=0.461 Sum_probs=25.0
Q ss_pred EEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 48 IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 48 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+-++|---|+.|.... ..++.++|++|++.++.
T Consensus 158 a~VicEi~~~dG~mar---~~~~~~fa~~h~l~~it 190 (203)
T COG0108 158 AGVICEIMNDDGTMAR---LPELEEFAKEHGLPVIT 190 (203)
T ss_pred cEEEEEEeCCCccccC---hHHHHHHHHHcCCcEEE
Confidence 4455555667899877 77788889999998874
No 477
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=25.62 E-value=93 Score=24.79 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=30.3
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHc-CCEEEEcccCC
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-GSIIIFDSAYA 88 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~vi~D~~~~ 88 (272)
++++|.+ |.+.+++..+.+.++++++ +..+++|-+..
T Consensus 68 ~~~~i~~-------G~l~~~~~~~~i~~~~~~~~~~~vv~Dpv~~ 105 (242)
T cd01169 68 PVDAIKI-------GMLGSAEIIEAVAEALKDYPDIPVVLDPVMV 105 (242)
T ss_pred CCCEEEE-------CCCCCHHHHHHHHHHHHhCCCCcEEECCcee
Confidence 5566666 8888889999999999987 88999997654
No 478
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=25.53 E-value=1.2e+02 Score=28.84 Aligned_cols=29 Identities=17% Similarity=0.330 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|++.|+.||.|-++-+..
T Consensus 243 ~~~efk~LV~~~H~~GI~VIlDvV~NHt~ 271 (688)
T TIGR02100 243 QVAEFKTMVRALHDAGIEVILDVVYNHTA 271 (688)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCcc
Confidence 56899999999999999999999986543
No 479
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=25.34 E-value=1e+02 Score=25.98 Aligned_cols=70 Identities=20% Similarity=0.179 Sum_probs=41.8
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
|...++.-. .++.+..+.......-+..+..-|-|++--|- ..+.++.++|+++|++.++.+.+.-.+..
T Consensus 59 ~~~ll~~~~iD~V~Iatp~~~H~e~~~~AL~aGkhVl~EKPl-----a~t~~ea~~l~~~a~~~~~~l~v~~~~Rf 129 (342)
T COG0673 59 LEELLADPDIDAVYIATPNALHAELALAALEAGKHVLCEKPL-----ALTLEEAEELVELARKAGVKLMVGFNRRF 129 (342)
T ss_pred HHHHhcCCCCCEEEEcCCChhhHHHHHHHHhcCCEEEEcCCC-----CCCHHHHHHHHHHHHHcCCceeeehhhhc
Confidence 444444444 44444444333333333333444555554442 24568899999999999999998877764
No 480
>cd04923 ACT_AK-LysC-DapG-like_2 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the second and fourth, of four, ACT domains present in cyanobacteria AK. Also included are the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (B. subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.28 E-value=1.3e+02 Score=17.67 Aligned_cols=43 Identities=26% Similarity=0.272 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+.+.. +.++||.+..-+ . ...++++..++++.+++++.|.+.+
T Consensus 19 ~i~~~-L~~~~i~v~~i~---~---s~~~is~~v~~~~~~~~~~~l~~~l 61 (63)
T cd04923 19 KMFKA-LAEAGINIEMIS---T---SEIKISCLVDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHH-HHHCCCCEEEEE---c---cCCeEEEEEeHHHHHHHHHHHHHHh
Confidence 44444 456588775433 1 1256777778889999988887653
No 481
>PRK12412 pyridoxal kinase; Reviewed
Probab=25.23 E-value=91 Score=25.56 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=30.3
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE-EEEcccCC
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI-IIFDSAYA 88 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~-vi~D~~~~ 88 (272)
++++|.+ |.+.+.+..+.+++++++++.. +++|-+..
T Consensus 72 ~~~~iki-------G~l~~~~~v~~i~~~~~~~~~~~vv~DPv~~ 109 (268)
T PRK12412 72 GVDALKT-------GMLGSVEIIEMVAETIEKHNFKNVVVDPVMV 109 (268)
T ss_pred CCCEEEE-------CCCCCHHHHHHHHHHHHhcCCCCEEECcCee
Confidence 3566664 8888999999999999998876 88997754
No 482
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=24.87 E-value=1e+02 Score=28.29 Aligned_cols=28 Identities=21% Similarity=0.306 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.+++++|++.|+++|+.||.|-+.-+.
T Consensus 74 t~~df~~Lv~~ah~~Gi~vilD~V~NH~ 101 (539)
T TIGR02456 74 TIDDFKDFVDEAHARGMRVIIDLVLNHT 101 (539)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcC
Confidence 3489999999999999999999777643
No 483
>KOG2656 consensus DNA methyltransferase 1-associated protein-1 [Chromatin structure and dynamics; Transcription]
Probab=24.83 E-value=86 Score=27.25 Aligned_cols=24 Identities=4% Similarity=0.153 Sum_probs=20.7
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 60 HAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 60 ~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
..|+.++.+.|.++|+++++.+++
T Consensus 131 n~WskeETD~LF~lck~fDLRf~V 154 (445)
T KOG2656|consen 131 NSWSKEETDYLFDLCKRFDLRFFV 154 (445)
T ss_pred ccccHHHHHHHHHHHHhcCeeEEE
Confidence 569999999999999999876553
No 484
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=24.81 E-value=88 Score=28.90 Aligned_cols=27 Identities=30% Similarity=0.511 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||+|-+.-+
T Consensus 79 t~~d~~~lv~~~h~~gi~vilD~V~NH 105 (551)
T PRK10933 79 TLDDFDELVAQAKSRGIRIILDMVFNH 105 (551)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 358899999999999999999977654
No 485
>COG5561 Predicted metal-binding protein [Function unknown]
Probab=24.28 E-value=1.7e+02 Score=19.67 Aligned_cols=43 Identities=19% Similarity=0.232 Sum_probs=28.4
Q ss_pred CCeEecCCCceEEE-eecCCCChHHHHHHHHHhcCeEeeCCCCC
Q 036024 200 GIKVYGGINAPYVW-AHFPGRKSWDVFAEILEKTHITTVPGSGF 242 (272)
Q Consensus 200 g~~~~~~~~~~~~~-i~l~~~~~~~~~~~ll~~~gi~v~~g~~~ 242 (272)
|.+...-..+++.. ..+|-...+++.....++.||.|.-|.++
T Consensus 56 gaeaihfasCml~~~PkCpy~~~eei~Kk~ie~~~i~Vv~gTH~ 99 (101)
T COG5561 56 GAEAIHFASCMLAFKPKCPYASAEEIAKKEIEKMGIKVVMGTHF 99 (101)
T ss_pred ccceeeeeeeeeccCCCCCccCHHHHHHHHHHHhCCcEEeecce
Confidence 44444433444444 44455566788888999999999888765
No 486
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=24.22 E-value=3.2e+02 Score=23.07 Aligned_cols=15 Identities=7% Similarity=0.120 Sum_probs=10.8
Q ss_pred HHHHHHHhcCeEeeC
Q 036024 224 VFAEILEKTHITTVP 238 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~ 238 (272)
.+..+.+++|+...+
T Consensus 212 af~Yf~~~ygl~~~~ 226 (311)
T PRK09545 212 AYGYFEKHYGLTPLG 226 (311)
T ss_pred hHHHHHHhCCCceee
Confidence 467778888887643
No 487
>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed
Probab=24.20 E-value=3.5e+02 Score=23.66 Aligned_cols=75 Identities=8% Similarity=0.066 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-cC-C
Q 036024 183 DYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-FG-H 257 (272)
Q Consensus 183 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~~-~ 257 (272)
+.+.++.+.+.+...++ .++.++.+++-++.+-.. .....+.+..| ++.|+.+ +.+|+.. .. +
T Consensus 248 ~~~~k~~~k~~~~~~~~~~~e~y~~~dAd~~IV~~GSt~~~~keAv~~l-r~~G~kv-----------g~l~~~~~~PfP 315 (375)
T PRK09627 248 KLIDRLFNKIESHQDEIEEYEEYMLDDAEILIIAYGSVSLSAKEAIKRL-REEGIKV-----------GLFRPITLWPSP 315 (375)
T ss_pred HHHHHHHHHHHHHhhhcCCceeeCCCCCCEEEEEeCCCHHHHHHHHHHH-HhcCCeE-----------EEEEeCeEECCC
Confidence 33333334444433332 244555445556666665 22334555544 4447765 3577663 33 5
Q ss_pred HHHHHHHHHHHH
Q 036024 258 RESILEASRRLE 269 (272)
Q Consensus 258 ~~~i~~~l~~l~ 269 (272)
.+++.++++..+
T Consensus 316 ~~~i~~~l~~~k 327 (375)
T PRK09627 316 AKKLKEIGDKFE 327 (375)
T ss_pred HHHHHHHHhcCC
Confidence 667877776544
No 488
>cd06169 BMC Bacterial Micro-Compartment (BMC) domain. Bacterial micro-compartments are primitive protein-based organelles that sequester specific metabolic pathways in bacterial cells. The prototypical bacterial microcompartment is the carboxysome shell, a bacterial polyhedral organelle which increase the efficiency of CO2 fixation by encapsulating RuBisCO and carbonic anhydrase. They can be divided into two types: alpha-type carboxysomes (alpha-cyanobacteria and proteobacteria) and beta-type carboxysomes (beta-cyanobacteria). In addition to these proteins there are several homologous shell proteins including those found in pdu organelles involved in coenzyme B12-dependent degradation of 1,2-propanediol and eut organelles involved in the cobalamin-dependent degradation of ethanolamine. Structure evidence shows that several carboxysome shell proteins and their homologs (Csos1A, CcmK1,2,4, and PduU) exist as hexamers which might further assemble into extended, tightly packed layers hypo
Probab=24.03 E-value=1.8e+02 Score=17.72 Aligned_cols=50 Identities=10% Similarity=-0.001 Sum_probs=35.3
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.-......+|..++.+.--....+ .++.++-+..+.++++.+++..++++
T Consensus 13 ~i~aaD~a~KaA~V~l~~~~~~~~--~g~~~~~i~G~~s~V~~A~~a~~~~~ 62 (62)
T cd06169 13 AIVAADAAVKAADVELVGIERAGG--GGLVTLIIRGDVSAVKAAVEAAEQAA 62 (62)
T ss_pred HHHHHHHHhhhcCeEEEEEEecCC--CcEEEEEEEECHHHHHHHHHHHHhhC
Confidence 345667788888888754332222 57777888788899999999887653
No 489
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=24.01 E-value=1e+02 Score=21.24 Aligned_cols=22 Identities=32% Similarity=0.472 Sum_probs=16.2
Q ss_pred CCHHHHHHHHHHHHHcCCEEEE
Q 036024 62 ATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 62 ~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
.+.++.++|.+.+++++..+.+
T Consensus 97 ~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 97 LTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SSHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHHHHHHHHHHHHHhCCEEEE
Confidence 3667788888888888777654
No 490
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=23.74 E-value=1.2e+02 Score=23.16 Aligned_cols=31 Identities=19% Similarity=0.437 Sum_probs=26.2
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 59 GHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 59 G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
|..++.+.++.|.++.++.+++|+.|.=|.+
T Consensus 30 Gs~i~~~~i~~i~~~~~~rgVIIfTDpD~~G 60 (174)
T TIGR00334 30 GSALKDETINLIKKAQKKQGVIILTDPDFPG 60 (174)
T ss_pred CCccCHHHHHHHHHHhhcCCEEEEeCCCCch
Confidence 5556888899999999999999999977654
No 491
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=23.29 E-value=1.2e+02 Score=25.52 Aligned_cols=56 Identities=18% Similarity=0.125 Sum_probs=36.9
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
..+.++.++ +...+.+... +.. +..+.. .+.+..++++++++|.+.|+++++-||-
T Consensus 22 ~id~ma~~k~N~l~lhl~D~--f~~--~~~p~~---------~~~~~~yT~~ei~ei~~yA~~~gI~vIP 78 (301)
T cd06565 22 LLRLLALLGANGLLLYYEDT--FPY--EGEPEV---------GRMRGAYTKEEIREIDDYAAELGIEVIP 78 (301)
T ss_pred HHHHHHHcCCCEEEEEEecc--eec--CCCccc---------ccCCCCcCHHHHHHHHHHHHHcCCEEEe
Confidence 345566777 7777777542 322 221211 1224458999999999999999999884
No 492
>COG5319 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.15 E-value=2.9e+02 Score=19.89 Aligned_cols=60 Identities=17% Similarity=0.130 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC--CCeEec-CCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCC
Q 036024 177 AVHSVVDYYKENTKILIDTLASL--GIKVYG-GINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG 243 (272)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~ 243 (272)
.+.+..+++++|++++-+.+.+- -+.+.. ++.|. -+..+.+-...|+++ ||.+.|--.|.
T Consensus 76 ~~~~~~r~vreNad~VGekFaeEARkiHygea~eRGI------~GeaS~eEa~aL~Ed-Gvei~PLpv~p 138 (142)
T COG5319 76 KMREAVRHVRENADYVGEKFAEEARKIHYGEADERGI------YGEASHEEAKALAED-GVEIAPLPVFP 138 (142)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhhccCCccccc------cCcCCHHHHHHHHHc-CceeccCCCCC
Confidence 45778889999999998888763 222211 11221 223445667888888 99999876553
No 493
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=23.09 E-value=4.7e+02 Score=22.24 Aligned_cols=37 Identities=24% Similarity=0.273 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH---hCCCeEecCCCceEEEe
Q 036024 178 VHSVVDYYKENTKILIDTLA---SLGIKVYGGINAPYVWA 214 (272)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~L~---~~g~~~~~~~~~~~~~i 214 (272)
.+...+...+|.+.+.+.|. +.|+.++.-.+..+-+.
T Consensus 40 ~~~l~~l~~~Nl~~l~~~L~~n~~~~I~f~RisS~l~P~a 79 (312)
T TIGR00629 40 KEAVLTLGKANLRDTMKTLHWNIGHGIPFYRFSSSIFPFA 79 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcEEecCccccCcC
Confidence 35555666666666666664 45888877545444333
No 494
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=23.09 E-value=74 Score=26.96 Aligned_cols=28 Identities=14% Similarity=0.097 Sum_probs=22.1
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 59 GHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 59 G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
|..++ +++++.+|++.++++++|-.|..
T Consensus 196 ~k~~s---l~evL~lc~e~~iP~v~D~hHh~ 223 (312)
T TIGR00629 196 DVTWT---VEDLLPVCEELNIPFVLDFHHHN 223 (312)
T ss_pred CCcCC---HHHHHHHHHhcCCCEEEEhHHhh
Confidence 44456 78889999999999999966654
No 495
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=22.95 E-value=99 Score=25.05 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=26.4
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 57 PTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 57 ptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
-|-.+++.+.+++.+++|++||+.+.....+..
T Consensus 33 Gt~~l~~~~~l~eki~la~~~~V~v~~GGtl~E 65 (237)
T TIGR03849 33 GTSALIDRDIVKEKIEMYKDYGIKVYPGGTLFE 65 (237)
T ss_pred ceEeeccHHHHHHHHHHHHHcCCeEeCCccHHH
Confidence 445667778899999999999999988865543
No 496
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion]
Probab=22.92 E-value=1.2e+02 Score=29.05 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=28.2
Q ss_pred EEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 49 IFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 49 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
-|.+-|+.|.|.+ .+++|.+|+++++++++..+
T Consensus 552 TysvvPrm~GG~~-~~~~L~~Iadva~ky~l~~v 584 (793)
T COG1251 552 TYSVVPRMPGGVT-NPEELRAIADVAEKYNLPTV 584 (793)
T ss_pred eEEEeccccCccc-CHHHHHHHHHHHHHhCccee
Confidence 5556799898876 66999999999999999986
No 497
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism]
Probab=22.72 E-value=1.4e+02 Score=28.39 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC
Q 036024 65 NQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA 105 (272)
Q Consensus 65 ~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 105 (272)
.+++++++-++..|+.|+.|-+|....- +...++..+++.
T Consensus 311 ~efK~lVd~aHs~GI~VlLDVV~sHaa~-n~~d~l~~fdGi 350 (757)
T KOG0470|consen 311 NEFKELVDKAHSLGIEVLLDVVHSHAAK-NSKDGLNMFDGI 350 (757)
T ss_pred HHHHHHHHHHhhCCcEEehhhhhhhccc-CcCCcchhccCc
Confidence 4999999999999999999999987554 333344445444
No 498
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=22.71 E-value=86 Score=21.07 Aligned_cols=41 Identities=27% Similarity=0.366 Sum_probs=28.4
Q ss_pred HHHHHHhcCeEeeCCCCCCC--CCCCeEEEEccCCHHHHHHHH
Q 036024 225 FAEILEKTHITTVPGSGFGP--GGEEYIRISGFGHRESILEAS 265 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~~--~~~~~~R~s~~~~~~~i~~~l 265 (272)
...+.+++||.-.|...+.. ++....|+.-..+.+++.+.+
T Consensus 61 ~~~~~~~~~i~~~Pti~~~~~~~g~~~~~~~G~~~~~~l~~~l 103 (104)
T cd02953 61 ITALLKRFGVFGPPTYLFYGPGGEPEPLRLPGFLTADEFLEAL 103 (104)
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCCCCcccccccCHHHHHHHh
Confidence 35667788988888776654 455556776566888877665
No 499
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=22.61 E-value=3.5e+02 Score=24.08 Aligned_cols=60 Identities=20% Similarity=0.094 Sum_probs=44.0
Q ss_pred HHhcccceeEEeecCCCCCcccCCCCCCCceEEEEe--cCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 17 DEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFC--SPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 17 ~~~~~~g~~~~~~~~~~~~~~~dl~~~~~~~~i~~~--~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
-.++.-|....+|.+..+||..|+.--...+++-+. +.+| -.++++.+++-.+-|++.|.
T Consensus 164 fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~---f~itv~alE~A~~~A~~~~~ 225 (471)
T KOG0256|consen 164 FCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNG---FQITVEALEAALNQARKLGL 225 (471)
T ss_pred HHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCC---ccccHHHHHHHHHHHHHhCC
Confidence 344666788889999999998887765566666664 4454 45788899998888888754
No 500
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=22.45 E-value=2.5e+02 Score=23.75 Aligned_cols=51 Identities=18% Similarity=0.315 Sum_probs=32.0
Q ss_pred CCceEEEEecC--CCc---cccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCC
Q 036024 44 SRTDIIFFCSP--NNP---TGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG 94 (272)
Q Consensus 44 ~~~~~i~~~~p--~np---tG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~ 94 (272)
.-+|+-+-++| +|- .|-.-+.+..-+|++-|++.+..++.|=.|+++..++
T Consensus 78 NyvRlRvwndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFHYSDfwaDP 133 (403)
T COG3867 78 NYVRLRVWNDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFHYSDFWADP 133 (403)
T ss_pred CeEEEEEecCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeeccchhhccCh
Confidence 34566666666 222 2333333334455555566799999999999887764
Done!