Query 036024
Match_columns 272
No_of_seqs 114 out of 1622
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 14:34:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036024.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036024hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ei9_A LL-diaminopimelate amin 100.0 1.1E-41 3.8E-46 298.1 25.8 267 4-270 143-423 (432)
2 3qgu_A LL-diaminopimelate amin 100.0 8.6E-41 2.9E-45 293.8 26.8 269 4-272 156-437 (449)
3 1b5p_A Protein (aspartate amin 100.0 1.5E-39 5.2E-44 280.5 25.1 256 4-272 116-382 (385)
4 3asa_A LL-diaminopimelate amin 100.0 6.9E-39 2.4E-43 277.7 23.9 265 4-272 119-390 (400)
5 2o1b_A Aminotransferase, class 100.0 1.4E-38 4.6E-43 276.3 23.4 259 4-272 134-400 (404)
6 3jtx_A Aminotransferase; NP_28 100.0 6.9E-38 2.4E-42 270.9 26.0 257 4-272 121-395 (396)
7 1gd9_A Aspartate aminotransfer 100.0 3.4E-38 1.2E-42 272.2 22.8 261 4-272 112-383 (389)
8 3h14_A Aminotransferase, class 100.0 1E-37 3.5E-42 269.5 25.8 255 4-271 116-378 (391)
9 2dou_A Probable N-succinyldiam 100.0 9.7E-38 3.3E-42 268.3 24.4 256 4-272 112-375 (376)
10 3b46_A Aminotransferase BNA3; 100.0 1.4E-38 4.8E-43 279.7 19.2 260 4-271 143-443 (447)
11 2x5d_A Probable aminotransfera 100.0 4.7E-38 1.6E-42 273.5 21.5 260 4-272 124-395 (412)
12 3fvs_A Kynurenine--oxoglutarat 100.0 7.2E-38 2.5E-42 273.0 20.0 261 4-272 116-419 (422)
13 3ihj_A Alanine aminotransferas 100.0 8.2E-38 2.8E-42 277.9 20.3 259 4-271 182-489 (498)
14 3ezs_A Aminotransferase ASPB; 100.0 1.6E-37 5.4E-42 266.8 20.4 253 4-272 109-372 (376)
15 3dyd_A Tyrosine aminotransfera 100.0 7.1E-37 2.4E-41 267.3 23.9 264 4-272 143-421 (427)
16 1u08_A Hypothetical aminotrans 100.0 2.6E-37 8.7E-42 266.6 20.5 257 4-270 116-385 (386)
17 3nra_A Aspartate aminotransfer 100.0 6.5E-37 2.2E-41 265.6 22.9 260 4-272 127-402 (407)
18 3e2y_A Kynurenine-oxoglutarate 100.0 4.3E-37 1.5E-41 267.0 21.7 260 4-271 110-409 (410)
19 1yiz_A Kynurenine aminotransfe 100.0 6.9E-37 2.4E-41 267.4 22.4 261 4-272 126-426 (429)
20 1o4s_A Aspartate aminotransfer 100.0 8.7E-37 3E-41 263.6 22.5 254 4-272 126-386 (389)
21 2r2n_A Kynurenine/alpha-aminoa 100.0 1.5E-36 5E-41 265.2 23.9 258 4-272 133-421 (425)
22 3tcm_A Alanine aminotransferas 100.0 6.6E-37 2.3E-41 272.4 21.7 259 4-271 183-490 (500)
23 3aow_A Putative uncharacterize 100.0 1.3E-36 4.5E-41 267.1 23.2 257 4-272 165-442 (448)
24 3piu_A 1-aminocyclopropane-1-c 100.0 9.9E-37 3.4E-41 267.0 21.4 260 4-272 136-429 (435)
25 2o0r_A RV0858C (N-succinyldiam 100.0 9.8E-37 3.4E-41 265.1 21.1 260 4-272 111-393 (411)
26 3kax_A Aminotransferase, class 100.0 1.9E-36 6.6E-41 260.5 22.2 260 4-272 107-382 (383)
27 3fdb_A Beta C-S lyase, putativ 100.0 6.5E-37 2.2E-41 263.0 18.5 255 4-272 106-373 (377)
28 3dzz_A Putative pyridoxal 5'-p 100.0 2.6E-36 8.9E-41 260.4 21.9 260 4-272 110-386 (391)
29 4dq6_A Putative pyridoxal phos 100.0 5.1E-36 1.8E-40 258.5 23.4 260 4-272 115-390 (391)
30 1j32_A Aspartate aminotransfer 100.0 2E-36 7E-41 261.0 20.9 257 4-271 115-383 (388)
31 1iay_A ACC synthase 2, 1-amino 100.0 5E-36 1.7E-40 261.9 23.4 259 4-272 133-424 (428)
32 1xi9_A Putative transaminase; 100.0 1.5E-36 5E-41 263.6 19.6 257 4-272 126-400 (406)
33 3k7y_A Aspartate aminotransfer 100.0 3.3E-37 1.1E-41 266.8 14.4 250 4-272 123-402 (405)
34 2gb3_A Aspartate aminotransfer 100.0 2.6E-35 8.9E-40 256.0 26.2 257 4-272 127-399 (409)
35 3ele_A Amino transferase; RER0 100.0 1.2E-35 4.2E-40 257.0 23.8 255 4-272 125-393 (398)
36 3l8a_A METC, putative aminotra 100.0 6.8E-36 2.3E-40 260.6 21.4 260 4-272 144-419 (421)
37 3op7_A Aminotransferase class 100.0 6.8E-36 2.3E-40 256.7 20.8 254 4-272 106-368 (375)
38 2z61_A Probable aspartate amin 100.0 1.3E-35 4.5E-40 254.4 22.0 251 4-272 114-368 (370)
39 2x5f_A Aspartate_tyrosine_phen 100.0 9.8E-36 3.3E-40 260.3 21.2 254 4-272 138-426 (430)
40 3g0t_A Putative aminotransfera 100.0 9.2E-36 3.2E-40 260.8 20.9 264 5-271 135-433 (437)
41 1v2d_A Glutamine aminotransfer 100.0 2.3E-35 7.8E-40 253.9 23.0 254 4-272 103-368 (381)
42 1bw0_A TAT, protein (tyrosine 100.0 2.1E-35 7.2E-40 257.0 22.8 261 4-272 129-410 (416)
43 1c7n_A Cystalysin; transferase 100.0 9.7E-36 3.3E-40 257.7 20.5 260 4-272 114-390 (399)
44 3ftb_A Histidinol-phosphate am 100.0 2.2E-34 7.5E-39 245.9 26.5 251 4-270 99-359 (361)
45 1fg7_A Histidinol phosphate am 100.0 1.8E-34 6.3E-39 246.3 25.6 247 4-272 101-355 (356)
46 3ppl_A Aspartate aminotransfer 100.0 1.6E-35 5.4E-40 258.8 19.3 259 3-272 133-417 (427)
47 2zy4_A L-aspartate beta-decarb 100.0 1.2E-35 4.2E-40 266.1 19.0 261 4-271 195-518 (546)
48 3f6t_A Aspartate aminotransfer 100.0 1.6E-35 5.3E-40 265.2 18.9 263 4-272 194-522 (533)
49 3d6k_A Putative aminotransfera 100.0 3.8E-35 1.3E-39 256.0 19.6 256 5-271 133-414 (422)
50 3ffh_A Histidinol-phosphate am 100.0 1.9E-34 6.6E-39 246.5 23.5 249 4-272 109-363 (363)
51 1d2f_A MALY protein; aminotran 100.0 6.7E-35 2.3E-39 251.8 20.5 257 4-272 112-386 (390)
52 1lc5_A COBD, L-threonine-O-3-p 100.0 8.5E-34 2.9E-38 242.8 27.1 250 4-272 99-357 (364)
53 1vp4_A Aminotransferase, putat 100.0 4.7E-35 1.6E-39 255.6 19.2 257 4-272 134-415 (425)
54 3ly1_A Putative histidinol-pho 100.0 2.3E-34 7.9E-39 245.2 22.6 249 4-272 93-349 (354)
55 2zyj_A Alpha-aminodipate amino 100.0 9.6E-35 3.3E-39 251.4 19.2 258 4-272 116-390 (397)
56 4eu1_A Mitochondrial aspartate 100.0 4.7E-35 1.6E-39 254.4 16.1 252 4-272 132-408 (409)
57 3get_A Histidinol-phosphate am 100.0 1.3E-34 4.6E-39 247.7 18.3 248 4-272 107-364 (365)
58 3ez1_A Aminotransferase MOCR f 100.0 2.2E-34 7.4E-39 251.2 19.3 258 4-272 125-412 (423)
59 2zc0_A Alanine glyoxylate tran 100.0 8.6E-34 2.9E-38 246.1 21.4 257 4-271 123-400 (407)
60 7aat_A Aspartate aminotransfer 100.0 2.6E-34 9E-39 248.9 16.9 251 4-272 124-400 (401)
61 3rq1_A Aminotransferase class 100.0 7.9E-34 2.7E-38 247.2 19.8 250 4-272 127-412 (418)
62 3g7q_A Valine-pyruvate aminotr 100.0 2.7E-33 9.1E-38 243.7 22.3 226 35-272 167-410 (417)
63 3euc_A Histidinol-phosphate am 100.0 3.6E-33 1.2E-37 239.0 22.7 245 4-272 110-365 (367)
64 3fkd_A L-threonine-O-3-phospha 100.0 1.9E-33 6.5E-38 239.3 20.7 245 4-271 90-338 (350)
65 4f4e_A Aromatic-amino-acid ami 100.0 3.3E-34 1.1E-38 249.9 16.3 251 4-272 144-419 (420)
66 3fsl_A Aromatic-amino-acid ami 100.0 2.4E-34 8.3E-39 248.7 15.3 251 4-272 122-397 (397)
67 3bwn_A AT1G70560, L-tryptophan 100.0 4.3E-34 1.5E-38 247.0 16.3 238 5-272 121-384 (391)
68 1ajs_A Aspartate aminotransfer 100.0 5.6E-34 1.9E-38 247.7 15.8 251 4-272 131-408 (412)
69 3b1d_A Betac-S lyase; HET: PLP 100.0 2.5E-36 8.5E-41 261.0 0.0 260 4-272 114-390 (392)
70 3hdo_A Histidinol-phosphate am 100.0 5.2E-32 1.8E-36 231.3 26.3 243 4-271 107-351 (360)
71 3meb_A Aspartate aminotransfer 100.0 1.5E-33 5.2E-38 247.6 16.5 253 4-272 146-441 (448)
72 4h51_A Aspartate aminotransfer 100.0 1.9E-33 6.4E-38 243.6 16.2 253 4-272 138-414 (420)
73 2q7w_A Aspartate aminotransfer 100.0 1.1E-33 3.7E-38 244.5 13.9 251 4-272 121-396 (396)
74 3t18_A Aminotransferase class 100.0 1E-32 3.5E-37 239.8 19.6 239 4-261 126-399 (413)
75 1uu1_A Histidinol-phosphate am 100.0 2.9E-32 1E-36 230.7 21.9 236 4-272 98-335 (335)
76 3if2_A Aminotransferase; YP_26 100.0 3.6E-32 1.2E-36 238.5 22.9 242 19-272 168-437 (444)
77 3p1t_A Putative histidinol-pho 100.0 2.5E-31 8.4E-36 224.9 25.6 241 4-272 91-334 (337)
78 1yaa_A Aspartate aminotransfer 100.0 7.6E-33 2.6E-37 240.6 15.3 249 4-271 125-407 (412)
79 2ay1_A Aroat, aromatic amino a 100.0 9.1E-33 3.1E-37 238.7 12.0 250 4-271 118-392 (394)
80 3cq5_A Histidinol-phosphate am 100.0 2.4E-30 8.3E-35 221.7 23.5 239 4-271 117-364 (369)
81 2hox_A ALLIIN lyase 1; cystein 100.0 9.4E-31 3.2E-35 228.4 15.2 239 4-272 156-422 (427)
82 3a2b_A Serine palmitoyltransfe 100.0 1.3E-29 4.6E-34 219.1 16.5 250 4-271 128-388 (398)
83 1vjo_A Alanine--glyoxylate ami 100.0 3.4E-28 1.2E-32 209.9 17.6 246 4-272 110-392 (393)
84 2dr1_A PH1308 protein, 386AA l 100.0 2.2E-27 7.5E-32 204.1 21.4 254 4-271 96-375 (386)
85 3tqx_A 2-amino-3-ketobutyrate 100.0 2.6E-28 8.7E-33 210.9 15.5 253 4-272 128-393 (399)
86 2bwn_A 5-aminolevulinate synth 100.0 7.9E-28 2.7E-32 208.2 17.7 250 4-272 133-397 (401)
87 1eg5_A Aminotransferase; PLP-d 100.0 3.5E-27 1.2E-31 202.5 20.4 248 4-271 90-372 (384)
88 1iug_A Putative aspartate amin 100.0 1.1E-26 3.8E-31 197.2 23.1 251 4-271 76-344 (352)
89 1bs0_A Protein (8-amino-7-oxon 100.0 1.9E-27 6.6E-32 204.6 16.7 251 4-271 124-383 (384)
90 2w8t_A SPT, serine palmitoyltr 100.0 2.8E-27 9.6E-32 206.6 17.4 251 4-271 149-411 (427)
91 1fc4_A 2-amino-3-ketobutyrate 99.9 1.6E-27 5.4E-32 206.3 13.9 248 4-271 130-393 (401)
92 1kmj_A Selenocysteine lyase; p 99.9 3.5E-26 1.2E-30 197.8 20.7 245 4-271 114-401 (406)
93 3zrp_A Serine-pyruvate aminotr 99.9 2.5E-26 8.7E-31 197.2 18.9 254 4-272 78-360 (384)
94 1m32_A 2-aminoethylphosphonate 99.9 7.9E-26 2.7E-30 192.8 20.6 252 4-272 81-362 (366)
95 3ffr_A Phosphoserine aminotran 99.9 1.2E-25 4.1E-30 191.5 21.2 231 16-272 99-361 (362)
96 2z9v_A Aspartate aminotransfer 99.9 9.8E-26 3.4E-30 194.3 20.8 246 4-271 84-367 (392)
97 3nnk_A Ureidoglycine-glyoxylat 99.9 2.8E-26 9.6E-31 198.8 16.8 245 4-271 89-386 (411)
98 3f9t_A TDC, L-tyrosine decarbo 99.9 5.5E-26 1.9E-30 195.7 18.3 251 3-272 123-395 (397)
99 3isl_A Purine catabolism prote 99.9 9.4E-26 3.2E-30 195.8 19.8 247 4-271 87-386 (416)
100 1t3i_A Probable cysteine desul 99.9 1E-25 3.5E-30 195.8 19.7 245 4-271 119-409 (420)
101 2huf_A Alanine glyoxylate amin 99.9 6.3E-26 2.2E-30 195.5 17.9 244 4-271 95-379 (393)
102 3kgw_A Alanine-glyoxylate amin 99.9 6.1E-26 2.1E-30 195.4 17.8 236 16-272 114-385 (393)
103 2ch1_A 3-hydroxykynurenine tra 99.9 3.6E-26 1.2E-30 197.3 16.3 245 4-271 94-379 (396)
104 2ord_A Acoat, acetylornithine 99.9 7.7E-27 2.6E-31 201.8 11.6 204 44-272 182-394 (397)
105 3lws_A Aromatic amino acid bet 99.9 2.9E-26 1E-30 195.3 14.9 233 20-272 109-356 (357)
106 2yrr_A Aminotransferase, class 99.9 9.7E-26 3.3E-30 191.3 17.9 252 4-272 75-350 (353)
107 4eb5_A Probable cysteine desul 99.9 1.5E-25 5.1E-30 192.3 19.2 247 4-271 89-369 (382)
108 1elu_A L-cysteine/L-cystine C- 99.9 3E-25 1E-29 190.9 20.5 250 4-271 102-388 (390)
109 3ruy_A Ornithine aminotransfer 99.9 3.9E-26 1.3E-30 197.0 14.6 204 44-272 181-391 (392)
110 1e5e_A MGL, methionine gamma-l 99.9 2.5E-25 8.7E-30 192.8 19.6 237 4-271 102-391 (404)
111 2eh6_A Acoat, acetylornithine 99.9 1.5E-25 5E-30 192.1 17.5 202 44-272 171-375 (375)
112 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 6.7E-27 2.3E-31 200.1 8.8 240 4-271 94-366 (371)
113 3cai_A Possible aminotransfera 99.9 5.9E-25 2E-29 190.3 21.1 245 4-271 114-405 (406)
114 3f0h_A Aminotransferase; RER07 99.9 3.4E-25 1.2E-29 189.9 18.9 247 4-272 96-371 (376)
115 4hvk_A Probable cysteine desul 99.9 2.4E-25 8.3E-30 190.7 17.9 250 4-271 89-369 (382)
116 3kki_A CAI-1 autoinducer synth 99.9 9.1E-26 3.1E-30 195.8 15.1 245 4-272 144-401 (409)
117 4adb_A Succinylornithine trans 99.9 1.9E-25 6.4E-30 193.5 16.3 205 44-272 182-397 (406)
118 3pj0_A LMO0305 protein; struct 99.9 2.8E-25 9.4E-30 189.4 16.9 233 21-272 111-359 (359)
119 2dkj_A Serine hydroxymethyltra 99.9 9.7E-25 3.3E-29 189.0 19.9 247 4-271 110-384 (407)
120 3lvm_A Cysteine desulfurase; s 99.9 8.3E-25 2.9E-29 190.4 18.8 252 4-272 114-396 (423)
121 2bkw_A Alanine-glyoxylate amin 99.9 2E-24 6.7E-29 185.6 18.5 251 4-272 87-381 (385)
122 1sff_A 4-aminobutyrate aminotr 99.9 3.1E-25 1.1E-29 193.3 13.1 205 44-271 198-420 (426)
123 3vax_A Putative uncharacterize 99.9 7.3E-25 2.5E-29 189.3 15.2 252 5-272 111-397 (400)
124 2aeu_A Hypothetical protein MJ 99.9 3.7E-24 1.3E-28 183.7 16.0 246 4-271 99-367 (374)
125 1v72_A Aldolase; PLP-dependent 99.9 1.2E-23 4E-28 178.9 16.6 243 4-272 84-350 (356)
126 2pb2_A Acetylornithine/succiny 99.9 4.5E-24 1.5E-28 185.9 14.1 205 44-272 200-415 (420)
127 1wyu_B Glycine dehydrogenase s 99.9 3E-23 1E-27 183.4 18.5 254 5-271 158-437 (474)
128 2fyf_A PSAT, phosphoserine ami 99.9 5.5E-23 1.9E-27 177.7 19.5 225 18-271 137-394 (398)
129 2c0r_A PSAT, phosphoserine ami 99.9 1.3E-23 4.6E-28 179.2 15.3 244 4-271 93-357 (362)
130 1vef_A Acetylornithine/acetyl- 99.9 1.1E-23 3.7E-28 181.9 14.8 206 44-272 184-394 (395)
131 1svv_A Threonine aldolase; str 99.9 1.2E-23 4.1E-28 178.9 14.1 243 4-272 91-355 (359)
132 3i4j_A Aminotransferase, class 99.9 7.6E-23 2.6E-27 178.6 19.4 209 46-272 191-425 (430)
133 1w23_A Phosphoserine aminotran 99.9 1.8E-23 6E-28 178.2 14.5 230 17-271 108-356 (360)
134 2rfv_A Methionine gamma-lyase; 99.9 6.3E-23 2.2E-27 177.4 18.2 240 4-271 104-396 (398)
135 1jg8_A L-ALLO-threonine aldola 99.9 2E-23 6.9E-28 177.0 14.7 238 4-271 78-342 (347)
136 3mad_A Sphingosine-1-phosphate 99.9 1E-22 3.5E-27 181.7 19.3 254 4-271 193-465 (514)
137 1zod_A DGD, 2,2-dialkylglycine 99.9 1.7E-23 5.7E-28 182.9 13.4 207 45-271 203-428 (433)
138 1qz9_A Kynureninase; kynurenin 99.9 1.4E-22 4.8E-27 175.9 18.9 224 23-271 146-398 (416)
139 2ez2_A Beta-tyrosinase, tyrosi 99.9 6.7E-23 2.3E-27 180.2 17.0 239 15-271 126-427 (456)
140 3nx3_A Acoat, acetylornithine 99.9 1.5E-22 5.3E-27 174.7 18.2 206 44-272 178-392 (395)
141 1ibj_A CBL, cystathionine beta 99.9 8.2E-23 2.8E-27 179.6 16.1 241 4-272 172-459 (464)
142 2oat_A Ornithine aminotransfer 99.9 7E-23 2.4E-27 179.3 15.5 206 44-272 222-436 (439)
143 3mc6_A Sphingosine-1-phosphate 99.9 2E-22 6.7E-27 179.2 18.6 253 4-271 159-433 (497)
144 3n5m_A Adenosylmethionine-8-am 99.9 1.8E-22 6.2E-27 177.3 17.5 210 44-272 214-449 (452)
145 2eo5_A 419AA long hypothetical 99.9 1.1E-22 3.7E-27 177.1 15.2 194 48-271 214-414 (419)
146 1pff_A Methionine gamma-lyase; 99.9 5.6E-22 1.9E-26 167.2 18.8 240 4-272 38-331 (331)
147 3ecd_A Serine hydroxymethyltra 99.9 8.7E-22 3E-26 171.3 20.4 229 24-272 146-394 (425)
148 1s0a_A Adenosylmethionine-8-am 99.9 4.8E-22 1.6E-26 173.5 18.4 203 45-272 204-421 (429)
149 1z7d_A Ornithine aminotransfer 99.9 1E-22 3.6E-27 177.9 14.2 204 44-271 211-425 (433)
150 3h7f_A Serine hydroxymethyltra 99.9 1E-21 3.5E-26 172.3 20.0 228 24-272 159-411 (447)
151 1ax4_A Tryptophanase; tryptoph 99.9 3.8E-22 1.3E-26 175.9 16.7 248 6-271 125-437 (467)
152 2vi8_A Serine hydroxymethyltra 99.9 1.4E-21 4.9E-26 168.9 20.0 246 4-271 110-383 (405)
153 3gbx_A Serine hydroxymethyltra 99.9 8.6E-22 2.9E-26 171.0 18.6 224 24-272 144-393 (420)
154 3n0l_A Serine hydroxymethyltra 99.9 2.8E-21 9.7E-26 167.7 21.7 247 4-272 112-386 (417)
155 3gju_A Putative aminotransfera 99.9 7.1E-22 2.4E-26 174.0 17.7 209 44-272 220-453 (460)
156 3a9z_A Selenocysteine lyase; P 99.9 9.3E-22 3.2E-26 171.7 18.2 235 19-271 144-424 (432)
157 3dxv_A Alpha-amino-epsilon-cap 99.9 2.9E-22 9.9E-27 175.3 14.7 206 44-272 200-422 (439)
158 3oks_A 4-aminobutyrate transam 99.9 8.7E-22 3E-26 172.9 16.4 206 45-272 226-448 (451)
159 3l44_A Glutamate-1-semialdehyd 99.9 7.1E-22 2.4E-26 172.6 15.5 204 45-272 202-427 (434)
160 1b9h_A AHBA synthase, protein 99.9 2.6E-21 8.8E-26 166.6 18.7 243 4-271 79-384 (388)
161 4ffc_A 4-aminobutyrate aminotr 99.9 7.6E-22 2.6E-26 173.4 15.6 207 44-272 223-446 (453)
162 1rv3_A Serine hydroxymethyltra 99.9 4.4E-21 1.5E-25 169.8 19.5 232 25-271 166-427 (483)
163 1cs1_A CGS, protein (cystathio 99.9 2.7E-20 9.2E-25 160.2 23.7 236 4-271 92-383 (386)
164 3e9k_A Kynureninase; kynurenin 99.9 4.7E-21 1.6E-25 168.9 18.3 246 6-272 158-458 (465)
165 3tfu_A Adenosylmethionine-8-am 99.9 1.8E-21 6.1E-26 171.1 15.4 204 44-272 232-450 (457)
166 3dod_A Adenosylmethionine-8-am 99.9 2.7E-21 9.2E-26 169.7 16.5 203 45-272 210-440 (448)
167 1mdo_A ARNB aminotransferase; 99.9 7.2E-21 2.5E-25 163.9 18.8 237 4-271 80-382 (393)
168 3fq8_A Glutamate-1-semialdehyd 99.9 1.7E-21 5.9E-26 169.8 14.1 204 45-272 199-424 (427)
169 1n8p_A Cystathionine gamma-lya 99.9 6.9E-21 2.4E-25 164.3 17.6 241 4-271 94-391 (393)
170 3ndn_A O-succinylhomoserine su 99.9 1E-20 3.5E-25 164.2 18.6 241 4-271 121-412 (414)
171 2epj_A Glutamate-1-semialdehyd 99.9 9.3E-22 3.2E-26 171.9 12.1 204 45-272 203-428 (434)
172 3ke3_A Putative serine-pyruvat 99.9 3.1E-21 1.1E-25 165.7 15.1 217 44-271 134-372 (379)
173 1qgn_A Protein (cystathionine 99.9 2.2E-20 7.4E-25 163.1 20.5 237 4-271 154-441 (445)
174 3a8u_X Omega-amino acid--pyruv 99.9 3.5E-21 1.2E-25 169.0 15.2 204 45-272 219-444 (449)
175 4a6r_A Omega transaminase; tra 99.9 5.6E-21 1.9E-25 168.2 16.5 203 46-272 220-446 (459)
176 2oga_A Transaminase; PLP-depen 99.9 1.2E-20 4.1E-25 163.1 18.2 239 4-271 104-392 (399)
177 4e77_A Glutamate-1-semialdehyd 99.9 3.9E-21 1.3E-25 167.7 14.7 202 47-272 201-426 (429)
178 2z67_A O-phosphoseryl-tRNA(SEC 99.9 1.8E-21 6.3E-26 171.1 12.6 246 6-272 179-455 (456)
179 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.2E-20 4.2E-25 165.3 17.7 237 4-271 97-349 (446)
180 3qhx_A Cystathionine gamma-syn 99.9 4.3E-20 1.5E-24 159.3 20.9 238 4-267 106-390 (392)
181 3i5t_A Aminotransferase; pyrid 99.9 7E-21 2.4E-25 168.2 16.1 204 44-272 220-451 (476)
182 3cog_A Cystathionine gamma-lya 99.9 4.1E-20 1.4E-24 160.0 20.6 240 4-271 106-398 (403)
183 2dgk_A GAD-beta, GADB, glutama 99.9 1.1E-20 3.8E-25 166.0 17.2 255 5-271 142-430 (452)
184 3acz_A Methionine gamma-lyase; 99.9 7.8E-20 2.7E-24 157.5 21.9 206 4-238 99-330 (389)
185 1gc0_A Methionine gamma-lyase; 99.9 6.6E-20 2.3E-24 158.5 21.1 241 4-271 105-397 (398)
186 3k28_A Glutamate-1-semialdehyd 99.9 7.7E-21 2.6E-25 165.9 15.0 202 45-272 200-424 (429)
187 2cjg_A L-lysine-epsilon aminot 99.9 9.6E-21 3.3E-25 166.2 15.6 206 44-272 230-445 (449)
188 2e7u_A Glutamate-1-semialdehyd 99.9 3.5E-21 1.2E-25 167.8 12.5 201 48-272 201-424 (424)
189 2cy8_A D-phgat, D-phenylglycin 99.9 4.8E-21 1.6E-25 168.3 13.4 205 45-271 201-431 (453)
190 2po3_A 4-dehydrase; external a 99.8 2.3E-19 7.9E-24 156.3 23.3 238 4-271 91-382 (424)
191 2cb1_A O-acetyl homoserine sul 99.8 2.4E-19 8.2E-24 155.6 23.0 243 4-270 96-411 (412)
192 3hmu_A Aminotransferase, class 99.8 1.2E-20 4E-25 166.6 14.8 204 45-272 223-449 (472)
193 3dr4_A Putative perosamine syn 99.8 1.8E-19 6.2E-24 155.2 19.7 243 4-272 97-390 (391)
194 3hbx_A GAD 1, glutamate decarb 99.8 5.7E-20 1.9E-24 163.4 16.7 255 5-271 156-440 (502)
195 2oqx_A Tryptophanase; lyase, p 99.8 2.6E-20 8.8E-25 164.2 13.8 211 45-271 183-438 (467)
196 2fnu_A Aminotransferase; prote 99.8 4E-19 1.4E-23 151.9 20.4 237 4-271 75-368 (375)
197 1wyu_A Glycine dehydrogenase ( 99.8 1.8E-18 6.2E-23 151.3 24.6 247 4-272 151-437 (438)
198 2fq6_A Cystathionine beta-lyas 99.8 1.3E-18 4.5E-23 150.9 21.7 240 4-271 122-414 (415)
199 3uwc_A Nucleotide-sugar aminot 99.8 3.1E-19 1.1E-23 152.7 16.9 240 4-272 79-368 (374)
200 2c81_A Glutamine-2-deoxy-scyll 99.8 1.8E-19 6.3E-24 156.6 14.9 240 4-271 83-410 (418)
201 3ri6_A O-acetylhomoserine sulf 99.8 9.8E-19 3.4E-23 152.2 17.4 248 4-271 122-428 (430)
202 2a7v_A Serine hydroxymethyltra 99.8 8.6E-18 2.9E-22 148.0 21.7 233 25-271 178-437 (490)
203 1js3_A DDC;, DOPA decarboxylas 99.8 1.1E-18 3.8E-23 154.6 16.1 242 15-271 195-470 (486)
204 2qma_A Diaminobutyrate-pyruvat 99.8 8E-18 2.7E-22 149.5 19.8 243 15-271 215-492 (497)
205 3frk_A QDTB; aminotransferase, 99.8 1.5E-18 5.2E-23 148.5 14.4 240 4-271 77-364 (373)
206 3nyt_A Aminotransferase WBPE; 99.8 2.8E-17 9.7E-22 140.3 21.2 237 4-270 76-359 (367)
207 3nmy_A Xometc, cystathionine g 99.8 1.5E-17 5.1E-22 143.6 17.7 228 4-256 106-382 (400)
208 1o69_A Aminotransferase; struc 99.8 1.6E-17 5.3E-22 143.4 16.9 236 4-271 73-383 (394)
209 2okj_A Glutamate decarboxylase 99.8 2.5E-17 8.6E-22 146.5 18.2 244 15-271 202-498 (504)
210 3e77_A Phosphoserine aminotran 99.8 2.9E-17 9.9E-22 140.0 17.7 240 7-271 109-371 (377)
211 1ohv_A 4-aminobutyrate aminotr 99.8 1.2E-17 4.3E-22 147.2 15.7 198 45-271 258-467 (472)
212 2yky_A Beta-transaminase; tran 99.6 5.1E-20 1.7E-24 161.3 0.0 202 44-272 232-457 (465)
213 3i16_A Aluminum resistance pro 99.7 1.5E-17 5E-22 144.3 13.6 181 17-218 142-341 (427)
214 3k40_A Aromatic-L-amino-acid d 99.7 2.6E-17 9E-22 145.2 15.1 242 15-271 195-467 (475)
215 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 5.4E-16 1.8E-20 135.5 23.2 245 4-272 111-433 (437)
216 2ctz_A O-acetyl-L-homoserine s 99.7 9.5E-17 3.2E-21 139.6 18.1 244 4-272 98-420 (421)
217 3jzl_A Putative cystathionine 99.7 1.2E-17 4.3E-22 144.2 12.4 177 18-218 128-324 (409)
218 3ht4_A Aluminum resistance pro 99.7 1.3E-17 4.4E-22 145.2 11.7 205 4-230 108-343 (431)
219 3vp6_A Glutamate decarboxylase 99.7 6.3E-17 2.1E-21 144.1 16.1 238 15-271 205-501 (511)
220 1c4k_A Protein (ornithine deca 99.7 1.8E-15 6.2E-20 139.0 24.1 254 4-271 214-562 (730)
221 4e1o_A HDC, histidine decarbox 99.7 7.2E-17 2.4E-21 142.7 13.8 243 15-271 201-474 (481)
222 3hvy_A Cystathionine beta-lyas 99.7 4.8E-17 1.6E-21 141.1 12.0 175 17-218 143-341 (427)
223 3m5u_A Phosphoserine aminotran 99.7 6E-16 2.1E-20 131.4 17.4 239 7-271 98-356 (361)
224 2jis_A Cysteine sulfinic acid 99.7 6.9E-16 2.3E-20 137.6 17.3 246 14-271 215-511 (515)
225 2vyc_A Biodegradative arginine 99.7 1.6E-15 5.4E-20 140.4 19.3 248 4-271 246-601 (755)
226 3ju7_A Putative PLP-dependent 99.7 1.4E-15 4.8E-20 130.4 17.4 243 4-272 79-372 (377)
227 3qm2_A Phosphoserine aminotran 99.7 1.7E-15 5.9E-20 129.7 15.6 238 8-271 122-381 (386)
228 3b8x_A WBDK, pyridoxamine 5-ph 99.6 5.3E-14 1.8E-18 120.9 21.3 240 4-269 81-390 (390)
229 4atq_A 4-aminobutyrate transam 99.6 7.1E-14 2.4E-18 122.1 15.3 207 45-272 226-452 (456)
230 3n75_A LDC, lysine decarboxyla 99.6 7.5E-14 2.6E-18 127.4 15.9 249 4-271 236-556 (715)
231 4ao9_A Beta-phenylalanine amin 99.6 5.3E-14 1.8E-18 122.5 14.2 200 44-272 219-443 (454)
232 3ou5_A Serine hydroxymethyltra 99.5 4.4E-12 1.5E-16 108.3 19.4 234 24-271 177-437 (490)
233 4a0g_A Adenosylmethionine-8-am 99.5 4.3E-14 1.5E-18 131.8 7.4 212 45-272 594-825 (831)
234 4e3q_A Pyruvate transaminase; 99.5 6.6E-13 2.2E-17 116.5 14.0 203 45-272 236-465 (473)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.1 2E-09 6.9E-14 92.4 15.5 240 15-272 175-458 (501)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.0 2.2E-08 7.4E-13 86.6 15.3 241 15-271 157-439 (450)
237 1yht_A DSPB; beta barrel, hydr 79.5 3.4 0.00012 34.6 5.9 68 15-82 38-112 (367)
238 2yl5_A Beta-N-acetylhexosamini 79.5 3.4 0.00012 35.6 6.0 66 15-82 30-112 (442)
239 2gjx_A Beta-hexosaminidase alp 78.3 3 0.0001 36.6 5.4 66 15-83 167-233 (507)
240 3gh5_A HEX1, beta-hexosaminida 73.9 2.6 8.9E-05 37.1 3.8 69 15-83 204-274 (525)
241 3l5o_A Uncharacterized protein 73.3 1.3 4.3E-05 35.4 1.5 68 4-77 142-212 (270)
242 1jak_A Beta-N-acetylhexosamini 71.8 3.4 0.00011 36.3 4.0 69 15-83 179-249 (512)
243 3rcn_A Beta-N-acetylhexosamini 70.8 2.2 7.4E-05 37.8 2.5 68 15-82 160-241 (543)
244 2yl6_A Beta-N-acetylhexosamini 70.8 3.1 0.00011 35.7 3.5 66 15-82 27-109 (434)
245 3ozo_A N-acetylglucosaminidase 68.4 5.8 0.0002 35.3 4.7 64 15-82 209-273 (572)
246 1bqc_A Protein (beta-mannanase 67.1 10 0.00036 30.4 5.8 47 17-86 39-86 (302)
247 1now_A Beta-hexosaminidase bet 66.5 3.7 0.00013 36.0 3.1 65 15-83 173-238 (507)
248 1hjs_A Beta-1,4-galactanase; 4 62.4 9.9 0.00034 31.2 4.8 37 55-91 50-86 (332)
249 1fob_A Beta-1,4-galactanase; B 60.6 12 0.00039 30.8 4.9 37 55-91 50-86 (334)
250 2whl_A Beta-mannanase, baman5; 56.0 20 0.00069 28.5 5.6 48 17-87 38-86 (294)
251 2h1q_A Hypothetical protein; Z 55.4 4.5 0.00015 32.3 1.5 67 4-76 142-211 (270)
252 4gqr_A Pancreatic alpha-amylas 54.3 9.8 0.00034 32.7 3.7 28 63-90 75-102 (496)
253 1x7f_A Outer surface protein; 53.2 7.5 0.00026 32.7 2.5 73 44-132 53-128 (385)
254 3jug_A Beta-mannanase; TIM-bar 51.5 27 0.00092 28.8 5.7 25 64-88 86-110 (345)
255 1c7s_A Beta-N-acetylhexosamini 49.7 6.8 0.00023 36.7 1.9 68 15-82 333-417 (858)
256 1g94_A Alpha-amylase; beta-alp 47.2 14 0.00048 31.6 3.4 29 63-91 63-91 (448)
257 2ya0_A Putative alkaline amylo 45.9 14 0.00047 34.0 3.3 26 64-89 254-279 (714)
258 3bzy_B ESCU; auto cleavage pro 45.3 15 0.0005 23.4 2.4 21 67-87 29-49 (83)
259 2e8y_A AMYX protein, pullulana 44.1 11 0.00036 34.7 2.3 27 64-90 315-341 (718)
260 1ht6_A AMY1, alpha-amylase iso 43.5 19 0.00065 30.3 3.7 28 63-90 67-94 (405)
261 2p0o_A Hypothetical protein DU 43.0 7.6 0.00026 32.5 1.0 57 64-133 49-105 (372)
262 1ud2_A Amylase, alpha-amylase; 42.9 19 0.00065 31.1 3.7 28 63-90 79-106 (480)
263 1lwj_A 4-alpha-glucanotransfer 42.8 25 0.00084 30.0 4.3 27 63-89 68-94 (441)
264 3bh4_A Alpha-amylase; calcium, 42.5 20 0.00067 31.0 3.7 28 63-90 77-104 (483)
265 1mxg_A Alpha amylase; hyperthe 41.9 21 0.0007 30.5 3.7 27 63-89 85-111 (435)
266 1wky_A Endo-beta-1,4-mannanase 41.9 49 0.0017 28.5 6.0 25 63-87 70-94 (464)
267 1hvx_A Alpha-amylase; hydrolas 41.7 20 0.00069 31.3 3.7 28 63-90 80-107 (515)
268 1wpc_A Glucan 1,4-alpha-maltoh 41.6 21 0.0007 30.9 3.7 28 63-90 81-108 (485)
269 4aie_A Glucan 1,6-alpha-glucos 41.2 21 0.0007 31.3 3.7 27 63-89 78-104 (549)
270 2guy_A Alpha-amylase A; (beta- 40.0 23 0.00077 30.6 3.7 27 64-90 97-123 (478)
271 3npg_A Uncharacterized DUF364 39.9 6.1 0.00021 31.1 0.0 69 4-78 117-191 (249)
272 1gcy_A Glucan 1,4-alpha-maltot 39.7 30 0.001 30.3 4.5 29 63-91 91-119 (527)
273 1wza_A Alpha-amylase A; hydrol 39.4 32 0.0011 29.7 4.5 27 63-89 80-106 (488)
274 1jae_A Alpha-amylase; glycosid 39.2 20 0.00068 30.9 3.2 27 64-90 74-100 (471)
275 2z1k_A (NEO)pullulanase; hydro 39.2 30 0.001 29.7 4.3 27 63-89 95-121 (475)
276 2dh2_A 4F2 cell-surface antige 39.0 26 0.00091 29.7 3.9 27 64-90 81-107 (424)
277 2vt1_B Surface presentation of 38.7 21 0.00072 23.2 2.4 21 67-87 29-49 (93)
278 3dhu_A Alpha-amylase; structur 37.8 26 0.00089 29.9 3.7 27 63-89 82-108 (449)
279 1j0h_A Neopullulanase; beta-al 36.9 34 0.0012 30.5 4.4 29 63-91 221-249 (588)
280 3ayr_A Endoglucanase; TIM barr 36.7 68 0.0023 26.5 6.0 55 16-88 68-126 (376)
281 2ya1_A Putative alkaline amylo 36.7 21 0.00073 34.2 3.2 26 64-89 561-586 (1014)
282 2aaa_A Alpha-amylase; glycosid 36.5 34 0.0012 29.5 4.2 29 63-91 96-124 (484)
283 3t7y_A YOP proteins translocat 35.8 21 0.00071 23.5 2.1 21 67-87 44-64 (97)
284 1ua7_A Alpha-amylase; beta-alp 35.7 29 0.001 29.3 3.6 29 63-91 73-101 (422)
285 1ea9_C Cyclomaltodextrinase; h 35.2 41 0.0014 29.9 4.6 30 62-91 216-245 (583)
286 3c01_E Surface presentation of 34.6 22 0.00076 23.4 2.1 21 67-87 29-49 (98)
287 1wzl_A Alpha-amylase II; pullu 34.5 40 0.0014 30.0 4.4 28 63-90 218-245 (585)
288 2wc7_A Alpha amylase, catalyti 33.7 31 0.0011 29.8 3.6 26 64-89 102-127 (488)
289 1zja_A Trehalulose synthase; s 33.2 41 0.0014 29.6 4.3 28 63-90 78-105 (557)
290 3bc9_A AMYB, alpha amylase, ca 32.7 34 0.0012 30.6 3.7 28 63-90 207-234 (599)
291 1x0p_A Hypothetical protein TL 32.5 36 0.0012 24.0 3.1 82 46-133 4-100 (143)
292 1ur4_A Galactanase; hydrolase, 32.4 77 0.0026 26.7 5.6 32 62-93 86-117 (399)
293 2ki0_A DS119; beta-alpha-beta, 32.4 30 0.001 17.0 1.8 19 63-81 13-31 (36)
294 1m53_A Isomaltulose synthase; 32.2 44 0.0015 29.6 4.3 27 63-89 91-117 (570)
295 3faw_A Reticulocyte binding pr 32.0 27 0.00093 32.9 3.0 26 64-89 369-394 (877)
296 3edf_A FSPCMD, cyclomaltodextr 31.9 45 0.0015 29.8 4.3 27 63-89 197-223 (601)
297 2hfn_A Synechocystis photorece 31.3 39 0.0013 24.2 3.1 81 46-132 7-102 (153)
298 1cyg_A Cyclodextrin glucanotra 31.0 37 0.0013 30.9 3.7 26 64-89 111-136 (680)
299 1d3c_A Cyclodextrin glycosyltr 31.0 37 0.0013 30.9 3.7 29 63-91 114-142 (686)
300 3bmv_A Cyclomaltodextrin gluca 31.0 37 0.0013 30.9 3.7 28 64-91 116-143 (683)
301 1qho_A Alpha-amylase; glycosid 30.9 37 0.0013 30.9 3.7 26 64-89 107-132 (686)
302 4aef_A Neopullulanase (alpha-a 30.9 47 0.0016 29.9 4.3 27 63-89 284-310 (645)
303 2epl_X N-acetyl-beta-D-glucosa 30.8 1.1E+02 0.0039 27.5 6.7 56 15-83 107-163 (627)
304 3pzt_A Endoglucanase; alpha/be 30.8 31 0.0011 28.1 2.9 24 64-87 104-127 (327)
305 1uok_A Oligo-1,6-glucosidase; 30.6 49 0.0017 29.2 4.3 27 63-89 77-103 (558)
306 2ze0_A Alpha-glucosidase; TIM 30.2 37 0.0013 30.0 3.4 27 63-89 77-103 (555)
307 7a3h_A Endoglucanase; hydrolas 29.9 35 0.0012 27.3 3.1 25 64-88 79-103 (303)
308 1tvn_A Cellulase, endoglucanas 29.6 39 0.0013 26.7 3.3 24 65-88 79-102 (293)
309 3aj7_A Oligo-1,6-glucosidase; 29.5 52 0.0018 29.3 4.3 28 63-90 86-113 (589)
310 3vgf_A Malto-oligosyltrehalose 29.5 42 0.0014 29.7 3.7 29 63-91 166-194 (558)
311 3m07_A Putative alpha amylase; 29.1 63 0.0021 29.0 4.8 29 63-91 201-229 (618)
312 1m7x_A 1,4-alpha-glucan branch 29.1 60 0.002 29.1 4.7 29 62-90 202-230 (617)
313 4aee_A Alpha amylase, catalyti 28.7 50 0.0017 30.1 4.1 27 63-89 310-336 (696)
314 2zic_A Dextran glucosidase; TI 28.6 51 0.0018 28.9 4.1 27 63-89 77-103 (543)
315 1g01_A Endoglucanase; alpha/be 28.5 41 0.0014 27.8 3.3 23 65-87 90-112 (364)
316 2bhu_A Maltooligosyltrehalose 27.7 63 0.0022 28.9 4.5 29 63-91 191-219 (602)
317 1tks_A 3,4-dihydroxy-2-butanon 27.4 70 0.0024 24.1 4.0 34 47-83 161-194 (204)
318 3vup_A Beta-1,4-mannanase; TIM 27.4 44 0.0015 26.5 3.3 23 65-87 90-112 (351)
319 3czg_A Sucrose hydrolase; (alp 27.2 48 0.0016 29.9 3.7 28 63-90 154-181 (644)
320 1g5a_A Amylosucrase; glycosylt 27.1 48 0.0017 29.8 3.7 27 63-89 161-187 (628)
321 3k1d_A 1,4-alpha-glucan-branch 26.8 64 0.0022 29.6 4.4 31 61-91 309-339 (722)
322 1egz_A Endoglucanase Z, EGZ, C 26.8 47 0.0016 26.2 3.3 23 65-87 77-99 (291)
323 3n9k_A Glucan 1,3-beta-glucosi 26.5 46 0.0016 28.0 3.3 52 17-86 80-134 (399)
324 2cks_A Endoglucanase E-5; carb 26.0 45 0.0015 26.6 3.0 23 65-87 80-102 (306)
325 1ji1_A Alpha-amylase I; beta/a 25.3 61 0.0021 29.1 4.1 29 63-91 237-269 (637)
326 1h4p_A Glucan 1,3-beta-glucosi 25.3 50 0.0017 27.8 3.3 55 17-88 80-137 (408)
327 3zss_A Putative glucanohydrola 25.3 55 0.0019 29.9 3.7 26 63-88 319-344 (695)
328 3aml_A OS06G0726400 protein; s 24.9 75 0.0025 29.4 4.5 31 62-92 248-278 (755)
329 4hty_A Cellulase; (alpha/beta) 24.8 52 0.0018 27.0 3.3 23 65-87 121-143 (359)
330 2wsk_A Glycogen debranching en 24.5 55 0.0019 29.6 3.6 29 63-91 240-268 (657)
331 3b1s_B Flagellar biosynthetic 29.9 16 0.00056 23.4 0.0 23 67-89 29-51 (87)
332 1bf2_A Isoamylase; hydrolase, 23.9 87 0.003 28.8 4.8 28 64-91 272-299 (750)
333 2vr5_A Glycogen operon protein 23.9 80 0.0028 28.9 4.6 28 64-91 266-293 (718)
334 3qr3_A Endoglucanase EG-II; TI 23.5 62 0.0021 26.5 3.4 59 16-89 49-108 (340)
335 1h1n_A Endo type cellulase ENG 23.1 64 0.0022 25.7 3.4 55 16-88 37-95 (305)
336 2jli_A YSCU, YOP proteins tran 22.7 46 0.0016 22.9 2.1 22 67-88 73-94 (123)
337 3ucq_A Amylosucrase; thermosta 22.4 66 0.0023 29.1 3.7 27 63-89 159-185 (655)
338 1qwg_A PSL synthase;, (2R)-pho 22.3 76 0.0026 24.8 3.5 34 56-89 46-79 (251)
339 1ceo_A Cellulase CELC; glycosy 22.3 63 0.0021 26.1 3.3 57 17-88 35-92 (343)
340 3h74_A Pyridoxal kinase; PSI-I 22.2 1E+02 0.0035 24.3 4.4 38 45-89 74-112 (282)
341 3o63_A Probable thiamine-phosp 22.1 77 0.0026 24.6 3.5 43 44-87 55-105 (243)
342 3nco_A Endoglucanase fncel5A; 22.0 77 0.0026 25.4 3.7 25 64-88 81-105 (320)
343 3bzs_A ESCU; auto cleavage pro 21.9 48 0.0017 23.2 2.1 22 67-88 83-104 (137)
344 1qnr_A Endo-1,4-B-D-mannanase; 21.8 56 0.0019 26.3 2.9 23 64-86 89-111 (344)
345 2wan_A Pullulanase; hydrolase, 21.5 79 0.0027 30.0 4.1 29 64-92 531-559 (921)
346 4hhu_A OR280; engineered prote 21.5 1.9E+02 0.0066 19.4 5.6 49 179-229 52-101 (170)
347 3ndz_A Endoglucanase D; cellot 21.4 84 0.0029 25.6 3.9 60 15-89 47-107 (345)
348 3civ_A Endo-beta-1,4-mannanase 21.4 1.4E+02 0.0047 24.5 5.1 25 62-86 94-118 (343)
349 3bdk_A D-mannonate dehydratase 21.0 1.8E+02 0.006 24.4 5.7 43 43-85 42-84 (386)
350 3l55_A B-1,4-endoglucanase/cel 20.8 93 0.0032 25.6 4.0 58 15-89 57-115 (353)
351 1gjw_A Maltodextrin glycosyltr 20.6 83 0.0028 28.3 3.9 29 64-92 181-209 (637)
352 1ece_A Endocellulase E1; glyco 20.6 71 0.0024 26.0 3.3 65 16-87 50-117 (358)
353 1edg_A Endoglucanase A; family 20.5 85 0.0029 25.9 3.8 58 16-89 67-125 (380)
354 2jlj_A YSCU, YOP proteins tran 20.4 54 0.0018 23.2 2.1 22 67-88 82-103 (144)
355 2c0h_A Mannan endo-1,4-beta-ma 20.4 72 0.0025 25.8 3.3 22 64-85 90-111 (353)
356 3mio_A DHBP synthase, 3,4-dihy 20.1 1E+02 0.0035 23.2 3.7 26 55-83 169-194 (206)
No 1
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1.1e-41 Score=298.09 Aligned_cols=267 Identities=67% Similarity=1.176 Sum_probs=229.6
Q ss_pred cccccccCccc-chHHhcccc-------------eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-------------NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-------------~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..|.+. |...+...| +++++|++.++++..|+++.++++++++++||||||.+++.+++++
T Consensus 143 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~~~~~~~l~~ 222 (432)
T 3ei9_A 143 VTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQ 222 (432)
T ss_dssp CCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhhCCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 66777777666 666655555 4789999877788888888889999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
|+++|+++|+++|+||+|.++.+++.+.++..+.+..+++++++|+||.+|++|+|+||++++++.+......+.+.+..
T Consensus 223 l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 302 (432)
T 3ei9_A 223 LVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNR 302 (432)
T ss_dssp HHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHH
Confidence 99999999999999999999888776667777665567889999999999999999999999988743333444566766
Q ss_pred hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024 150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL 229 (272)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll 229 (272)
.......+++.++|.++.+++.+...+++++++++++++++++.+.|+++|+++.++.+++|+|+.+++.+..+++..++
T Consensus 303 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 382 (432)
T 3ei9_A 303 IICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEIL 382 (432)
T ss_dssp HHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEEECTTSCHHHHHHHHH
T ss_pred HhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEEECCCCCHHHHHHHHH
Confidence 66666667899999999999875555788999999999999999999999999988778999999999767788889999
Q ss_pred HhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 230 EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
+++||.+.||+.|++.+.+++|++++.+++++++++++|++
T Consensus 383 ~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~ 423 (432)
T 3ei9_A 383 EKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQ 423 (432)
T ss_dssp HHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHH
T ss_pred HHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHH
Confidence 88899999999999877899999998899999999999986
No 2
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=8.6e-41 Score=293.85 Aligned_cols=269 Identities=57% Similarity=1.055 Sum_probs=231.0
Q ss_pred cccccccCccc-chHHhcccc-e----------eEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-N----------IEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLV 71 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~----------~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~ 71 (272)
|.|++..|.+. |...+...| + ++.+|+++++++.+|+++.+++++|++++||||||.+++.+++++|+
T Consensus 156 d~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~ 235 (449)
T 3qgu_A 156 PTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELV 235 (449)
T ss_dssp SCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHH
Confidence 66777777766 778888888 7 99999998878888888778999999999999999999999999999
Q ss_pred HHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 72 EFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 72 ~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
++|+++|+++|+||+|.++.+++. +.++..+....+++++++|+||.+|++|+|+||++++++.+......+...+...
T Consensus 236 ~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 315 (449)
T 3qgu_A 236 NFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRV 315 (449)
T ss_dssp HHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHH
T ss_pred HHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHH
Confidence 999999999999999999888753 4466666555678899999999999999999999999888543222333455555
Q ss_pred hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHH
Q 036024 151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILE 230 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~ 230 (272)
......+.+.++|.++.+++.+...+++++++++++++++++.+.|+++|+++..+++++++|+.+++.+..+++..|++
T Consensus 316 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 395 (449)
T 3qgu_A 316 MTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFPGKPSWDVFAEILE 395 (449)
T ss_dssp HHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEEEECTTSCHHHHHHHHHH
T ss_pred hhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEEECCCCCHHHHHHHHHH
Confidence 66666678999999999999865557889999999999999999999999999988889999999986567788889998
Q ss_pred hcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 231 KTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 231 ~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++||.+.||+.|++.+.+++|+++..+++++++++++|++++
T Consensus 396 ~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~ 437 (449)
T 3qgu_A 396 RCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAY 437 (449)
T ss_dssp HHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 889999999999887789999998889999999999998763
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.5e-39 Score=280.52 Aligned_cols=256 Identities=23% Similarity=0.327 Sum_probs=214.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| +++.+|+++++++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 116 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~ 195 (385)
T 1b5p_A 116 DEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVE 195 (385)
T ss_dssp CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 56777777666 888888889 9999999865567666332 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+|+++|+||+|.++.+++...++..+.. +++++++|+||.+|++|+|+||+++++++ ++.+.........
T Consensus 196 ~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~i~~~s~SK~~~~~G~RiG~~~~~~~~--------~~~l~~~~~~~~~ 265 (385)
T 1b5p_A 196 HDFYLVSDEIYEHLLYEGEHFSPGRVAP--EHTLTVNGAAKAFAMTGWRIGYACGPKEV--------IKAMASVSRQSTT 265 (385)
T ss_dssp TTCEEEEECTTTTCBSSSCCCCGGGTCT--TTEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHHTTTC
T ss_pred cCCEEEEEccchhcccCCCCCCHHHcCC--CCEEEEEechhhcCCcccceEEEEeCHHH--------HHHHHHHHhhccC
Confidence 9999999999999887653345555533 77899999999999999999999998877 6666666655555
Q ss_pred CcchHHHHHHHHhcccc--cHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--CCChHHHHHHHHHhc
Q 036024 157 GASNIAQAGGLACLSSE--GLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKT 232 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~ 232 (272)
+++.+.|.++.++++.. ..+++++.+++++++++.+.+.|+++|+++..+++++++|+.++ +.+..++...|+ ++
T Consensus 266 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~ 344 (385)
T 1b5p_A 266 SPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL-EA 344 (385)
T ss_dssp SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHH-HT
T ss_pred CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHH-HC
Confidence 68889999888888641 34678899999999999999999988998888888899999986 346677777777 56
Q ss_pred CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
||.+.||+.|+. ++++|+|+..+++++++++++|++++
T Consensus 345 gv~v~~g~~f~~--~~~iRis~~~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 345 GVAVVPGTDFAA--FGHVRLSYATSEENLRKALERFARVL 382 (385)
T ss_dssp TEECEESGGGTC--TTEEEEECCSCHHHHHHHHHHGGGGC
T ss_pred CeEEecccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999999975 67999999889999999999998864
No 4
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=6.9e-39 Score=277.75 Aligned_cols=265 Identities=40% Similarity=0.690 Sum_probs=211.2
Q ss_pred cccccccCccc-chHHhcccc-e-eEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-N-IEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~-~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 80 (272)
|.|++..|.+. +...++..| + ++++|+++++++..|+++.++++++++++||||||.+++.+++++|+++|+++|++
T Consensus 119 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 198 (400)
T 3asa_A 119 QTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEIL 198 (400)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCE
T ss_pred CEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCE
Confidence 56777766655 777778888 8 99999987767877877667899999999999999999999999999999999999
Q ss_pred EEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh-hhhhccCCc
Q 036024 81 IIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR-IICTCFNGA 158 (272)
Q Consensus 81 vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 158 (272)
+|+||+|.++.+++. +.++..+....+++++++|+||.+|++|+|+||++++++........ +..+.. .......+.
T Consensus 199 li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 277 (400)
T 3asa_A 199 ILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGA 277 (400)
T ss_dssp EEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCC
T ss_pred EEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhh-HHHHHHHHhccCccCC
Confidence 999999998877653 34555554335678999999999999999999999988773111000 122222 222233458
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEee-cC-CCChHHHHHHHHHhcCeEe
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAH-FP-GRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~-l~-~~~~~~~~~~ll~~~gi~v 236 (272)
+.++|.++.+++... ++++.+++++++++++.+.|++.|+++.++.+++++|+. ++ +.+..++...+++++||.+
T Consensus 278 ~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v 354 (400)
T 3asa_A 278 SIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAI 354 (400)
T ss_dssp CHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHTTCEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEEC
T ss_pred ChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEE
Confidence 889999888888754 567888999999999999999989999887789999999 77 3455577888888789999
Q ss_pred eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.||+.|++.+.+++|+++..+++++++++++|++++
T Consensus 355 ~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~ 390 (400)
T 3asa_A 355 TPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAP 390 (400)
T ss_dssp EEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC--
T ss_pred eChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHH
Confidence 999999766678999998789999999999998764
No 5
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.4e-38 Score=276.30 Aligned_cols=259 Identities=25% Similarity=0.345 Sum_probs=217.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.++ +++.+|++.+ ++++++++++|+||||.+++.+++++|+++|++
T Consensus 134 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 212 (404)
T 2o1b_A 134 DYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKG 212 (404)
T ss_dssp CEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTT
T ss_pred CEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHH
Confidence 56777666555 878888888 999999987 4777776654 468999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+|+++|+||+|.++.+++.+.++..+.+..+++++++|+||.+|++|+|+||+++++++ ++.+.........
T Consensus 213 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~~~~~ 284 (404)
T 2o1b_A 213 TDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDM--------IQALKKYQTHTNA 284 (404)
T ss_dssp SSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHH--------HHHHHHHHHHHCC
T ss_pred cCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHH--------HHHHHHHHhhccC
Confidence 99999999999998876544555555433467899999999999899999999998877 5666666655556
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeE
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHIT 235 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~ 235 (272)
+.+.+.|.++.++++.. .+++++.+++++++++.+.+.|+++|+++..+++++++|+.++ +.+..++..++++++||.
T Consensus 285 ~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~ 363 (404)
T 2o1b_A 285 GMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSIL 363 (404)
T ss_dssp CCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEE
T ss_pred CCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEE
Confidence 68999999999888753 6778999999999999999999998998888878889999997 445667788888767999
Q ss_pred eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+.||..|+..+.+++|+++..+++++++++++|++++
T Consensus 364 v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~~l 400 (404)
T 2o1b_A 364 VAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELA 400 (404)
T ss_dssp CEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGG
T ss_pred EeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 9999998765578999999778899999999998864
No 6
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=6.9e-38 Score=270.86 Aligned_cols=257 Identities=23% Similarity=0.354 Sum_probs=215.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...+...| +++.+|++ +.++.+|++.+ ++++++++++||||||.+++.+++++|+++|++
T Consensus 121 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~ 199 (396)
T 3jtx_A 121 PAIVSPNPFYQIYEGATLLGGGEIHFANCP-APSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDK 199 (396)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEECC-TTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCcHhHHHHHHHcCCEEEEeecC-CCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHH
Confidence 57777777666 777888889 99999995 44887786654 578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCC-CCCCccc----cCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024 77 NGSIIIFDSAYAAYVTDG-CPRSIYE----IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII 151 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~-~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
+|+++|+||+|.++.+++ .+.+... +....+++++++|+||.+|++|+|+||+++++++ .+.+....
T Consensus 200 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~ 271 (396)
T 3jtx_A 200 YGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAEL--------LKNFLLYR 271 (396)
T ss_dssp HCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHH--------HHHHHHHH
T ss_pred cCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHH--------HHHHHHHH
Confidence 999999999999988776 3333322 1223577899999999999999999999998877 66777666
Q ss_pred hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHh
Q 036024 152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEK 231 (272)
Q Consensus 152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~ 231 (272)
.....+.+.+.|.++.+++.. .+++++.+++++++++.+.+.|.+. +.+..+++++++|+.++..+..++...|+++
T Consensus 272 ~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (396)
T 3jtx_A 272 TYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPDGDDLAFARNLWQK 348 (396)
T ss_dssp HHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT-SCCCCCSSSSEEEEECTTSCHHHHHHHHHHH
T ss_pred hhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCCeeEEEEEECCCCCHHHHHHHHHHH
Confidence 666667899999999888874 4677899999999999999999986 5666777899999999876777888888888
Q ss_pred cCeEeeCCCCCCC------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGP------GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~------~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||+.|+. .+.+++|+++..+++++++++++|++++
T Consensus 349 ~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 349 AAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp HCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred CCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 8999999999975 3578999999889999999999999875
No 7
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=3.4e-38 Score=272.21 Aligned_cols=261 Identities=26% Similarity=0.355 Sum_probs=216.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.++++++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 112 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~ 191 (389)
T 1gd9_A 112 EEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVE 191 (389)
T ss_dssp CEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 56667666555 777888888 9999999865567666443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+|+++|+||+|.++.+++. ..++..+.+..+++++++|+||.+|++|+|+||+++++++ .+.+........
T Consensus 192 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~~ 263 (389)
T 1gd9_A 192 HDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI--------IERMVKFQMYNA 263 (389)
T ss_dssp TTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHTTTT
T ss_pred cCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHH--------HHHHHHHHhhhc
Confidence 9999999999999887764 4566666544567899999999999899999999998877 666766665555
Q ss_pred CCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--CCChHHHHHHHHHhc
Q 036024 156 NGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKT 232 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~ 232 (272)
.+.+.+.|.++.++++.... +++++++++++++++.+.+.|+++|+++..+++++++|+.++ +.+..++...|++++
T Consensus 264 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 343 (389)
T 1gd9_A 264 TCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEA 343 (389)
T ss_dssp CSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhC
Confidence 66889999999888874221 378999999999999999999998988888877889999987 456677778887567
Q ss_pred CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
||.+.||..|+..+.+++|+++..+++++++++++|++++
T Consensus 344 gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~~ 383 (389)
T 1gd9_A 344 RVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVL 383 (389)
T ss_dssp CEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999999988765678999999889999999999998753
No 8
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=1e-37 Score=269.47 Aligned_cols=255 Identities=29% Similarity=0.374 Sum_probs=216.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCC--CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTS--RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|.|++..|.+. +...++..| +++.+|.++++++.+|++.+. +++++++++||||||.+++.+++++|+++|+++|+
T Consensus 116 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~ 195 (391)
T 3h14_A 116 DRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGA 195 (391)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTSCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred CEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhcCCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 56777776666 778888899 999999998777877744321 78999999999999999999999999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (272)
++|+||+|.++.+++.+.+...+ .+++++++|+||.+|++|+|+||+++++++ .+.+.........+++
T Consensus 196 ~li~De~~~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~~~~~~~~ 264 (391)
T 3h14_A 196 SFISDEIYHGIEYEAKAVTALEL---TDECYVINSFSKYFSMTGWRVGWMVVPEDQ--------VRVVERIAQNMFICAP 264 (391)
T ss_dssp EEEEECTTTTCBSSSCCCCGGGT---CSSSEEEEESSSTTCCTTSCCEEEECCGGG--------HHHHHHHHHHTTCCCC
T ss_pred EEEEECcchhcccCCCCcChhhc---CCCEEEEEechhccCCccceeEEEEeCHHH--------HHHHHHHHhhhccCCC
Confidence 99999999998887755555443 467899999999999999999999999887 6677777766677788
Q ss_pred hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecC--CCChHHHHHHHHHhcCeEe
Q 036024 160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFP--GRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v 236 (272)
.+.+.++.+++. ..+++++.+++++++++.+.+.|+++|+.. ..+++++++|+.++ +.+..++...+++++||.+
T Consensus 265 ~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 342 (391)
T 3h14_A 265 HASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAV 342 (391)
T ss_dssp HHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEE
Confidence 999998888887 557889999999999999999999887654 46667899999987 4467788888888889999
Q ss_pred eCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 237 VPGSGFGP-GGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 237 ~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
.||+.|+. .+.+++|+++..+++++++++++|+++
T Consensus 343 ~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~ 378 (391)
T 3h14_A 343 TPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAF 378 (391)
T ss_dssp EEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHH
T ss_pred cCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 99999986 567899999988999999999999876
No 9
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=9.7e-38 Score=268.29 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=213.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|. +.++.+|++.+ ++++++++++||||||.+++.+++++|+++|++
T Consensus 112 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 189 (376)
T 2dou_A 112 DLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARK 189 (376)
T ss_dssp CEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHH
Confidence 56777776655 777788888 9999998 34777776654 468999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+|+++|+||+|.++.+++.+.++....+..+++++++|+||.+|++|+|+||+++++++ .+.+.........
T Consensus 190 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~~~ 261 (376)
T 2dou_A 190 HGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEA--------LARLERVKGVIDF 261 (376)
T ss_dssp TTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHH--------HHHHHHHHHHHCC
T ss_pred cCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHH--------HHHHHHHHHhccc
Confidence 99999999999998876644455554444567899999999999899999999998877 6666666655555
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeE
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHIT 235 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~ 235 (272)
+.+.+.|.++.++++. ..+++++.+++++++++.+.+.|+++ +.+..+.+++++|+.++ +.+..++...|+++ ||.
T Consensus 262 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~ 338 (376)
T 2dou_A 262 NQYAGVLRMGVEALKT-PKEVVRGYARVYRERALGMAEALKGV-LSLLPPRATMYLWGRLPEGVDDLEFGLRLVER-GVA 338 (376)
T ss_dssp CSCHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHHHHHHHHTTT-SEECCCCBSSEEEEECCTTCCHHHHHHHHHHT-TEE
T ss_pred CCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHh-cCccCCCeeEEEEEECCCCCCHHHHHHHHHHC-CEE
Confidence 6788999999998875 35778999999999999999999998 88887778889999997 44566778888777 999
Q ss_pred eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus 339 v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 339 LAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp CEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred EcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 9999988765578999999779999999999999875
No 10
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-38 Score=279.68 Aligned_cols=260 Identities=18% Similarity=0.275 Sum_probs=213.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCC----------CcccCCCC-----CCCceEEEEecCCCccccCCCHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGN----------NFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQ 66 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~----------~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~ 66 (272)
|.|++..|++. |...++..| +++.+|+++++ +|.+|++. .++++++++++||||||.+++.++
T Consensus 143 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 222 (447)
T 3b46_A 143 DEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREE 222 (447)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHH
Confidence 66777777776 788888888 99999987653 46666333 267899999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEcccCCccccCCCCCCcccc-CCCCCceEEEecCccccCCCccceeEEEe-cccccccCCcchH
Q 036024 67 LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVV-PEELLFSSGFPVI 144 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~-~~~~~~~~~~~~~ 144 (272)
+++|+++|++||+++|+||+|.++.+++...++..+ .+..+++++++|+||.+|++|+|+||+++ ++++ +
T Consensus 223 l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l--------~ 294 (447)
T 3b46_A 223 LTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAEL--------L 294 (447)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHH--------H
T ss_pred HHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHH--------H
Confidence 999999999999999999999998887644455554 22346789999999999999999999999 7777 5
Q ss_pred HHHHhhhhhccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC----
Q 036024 145 NDFNRIICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR---- 219 (272)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~---- 219 (272)
+.+.........+.+.+.|.++.++++... .+++++++++++++++.+.+.|+++|+++..+++++|+|++++..
T Consensus 295 ~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~ 374 (447)
T 3b46_A 295 SYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPE 374 (447)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCCT
T ss_pred HHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCcc
Confidence 666655555556688899998888887432 367889999999999999999999899988888899999999742
Q ss_pred ------------ChHHHHHHHHHhcCeEeeCCCCCCCC-----CCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 220 ------------KSWDVFAEILEKTHITTVPGSGFGPG-----GEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 220 ------------~~~~~~~~ll~~~gi~v~~g~~~~~~-----~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+..++..+|++++||.+.||+.|+.. +.+++|+++..+++++++++++|+++
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 375 DYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLL 443 (447)
T ss_dssp TCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred ccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence 34567777887779999999988743 26899999988999999999999764
No 11
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.7e-38 Score=273.52 Aligned_cols=260 Identities=25% Similarity=0.453 Sum_probs=214.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.++++++.+|++.+ ++++++++++||||||.+++.+++++|+++|++
T Consensus 124 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 203 (412)
T 2x5d_A 124 DTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQ 203 (412)
T ss_dssp CEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 56777666655 777788888 99999998765766553331 678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+|+++|+||+|.++.+.+. ..++..+....+++++++|+||.+|++|+|+||+++++++ ++.+........
T Consensus 204 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~~ 275 (412)
T 2x5d_A 204 YDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL--------VSALARIKSYHD 275 (412)
T ss_dssp HTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHH--------HHHHHHHHHHHC
T ss_pred cCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHH--------HHHHHHHHhhhc
Confidence 9999999999999887543 4456665433577899999999999999999999998877 566666665555
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-C---ChHHHHHHHHHh
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-R---KSWDVFAEILEK 231 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~---~~~~~~~~ll~~ 231 (272)
.+.+.+.|.++.+++... .+++++++++++++++++.+.|+++|+++..+++++++|+.++. . +..++...|+++
T Consensus 276 ~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 354 (412)
T 2x5d_A 276 YGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQD 354 (412)
T ss_dssp CCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHH
Confidence 668899999999888743 46789999999999999999999888888887778899999973 3 566778888777
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus 355 ~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l 395 (412)
T 2x5d_A 355 AKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMF 395 (412)
T ss_dssp HCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 79999999998765678999999889999999999998763
No 12
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=7.2e-38 Score=272.98 Aligned_cols=261 Identities=20% Similarity=0.265 Sum_probs=217.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCC----C------CCcccCCCC-----CCCceEEEEecCCCccccCCCHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP----G------NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQ 66 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~----~------~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~ 66 (272)
|.|++..|.+. |...++..| +++++|+++ + .++.+|++. .++++++++++||||||.+++.++
T Consensus 116 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~ 195 (422)
T 3fvs_A 116 DEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREE 195 (422)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred CEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHH
Confidence 56677666655 888888889 999999986 2 245566433 267899999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH
Q 036024 67 LEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN 145 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~ 145 (272)
+++|+++|+++|+++|+||+|.++.+++. ..++..+....+++++++|+||.+|++|+|+||+++++++ ++
T Consensus 196 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~--------~~ 267 (422)
T 3fvs_A 196 LELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI--------MK 267 (422)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHH--------HH
T ss_pred HHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHH--------HH
Confidence 99999999999999999999999888764 4566666555678999999999999999999999999887 66
Q ss_pred HHHhhhhhccCCcchHHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-
Q 036024 146 DFNRIICTCFNGASNIAQAGGLACLSS------EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG- 218 (272)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~- 218 (272)
.+.........+.+.+.|.++.+++.. ...+++++++++++++++.+.+.|+++|+.+..+++++++|+.++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 347 (422)
T 3fvs_A 268 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDF 347 (422)
T ss_dssp HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHHH
T ss_pred HHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechhh
Confidence 666666666667889999999988874 2346788999999999999999999999998888899999999852
Q ss_pred ---CC----------hHHHHHHHHHhcCeEeeCCCCCCC-----CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 219 ---RK----------SWDVFAEILEKTHITTVPGSGFGP-----GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 219 ---~~----------~~~~~~~ll~~~gi~v~~g~~~~~-----~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.. ..++...+++++||.+.||+.|+. .+.+++|++++.+++++++++++|++++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l 419 (422)
T 3fvs_A 348 KRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWK 419 (422)
T ss_dssp HHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 11 457788888888999999999863 4578999999889999999999998763
No 13
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.2e-38 Score=277.89 Aligned_cols=259 Identities=18% Similarity=0.195 Sum_probs=209.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-----CceEEEEecCCCccccCCCHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-----RTDIIFFCSPNNPTGHAATQNQLEQLV 71 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-----~~~~i~~~~p~nptG~~~~~~~l~~l~ 71 (272)
|.|++..|.+. |...++..| ++++++++++++|.+|++.+ + ++++|+++|||||||.+++.+++++|+
T Consensus 182 d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~ 261 (498)
T 3ihj_A 182 TGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVI 261 (498)
T ss_dssp EEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHH
Confidence 46778777666 888888889 99999999888898886653 1 589999999999999999999999999
Q ss_pred HHHHHcCCEEEEcccCCccccCCC--CCCccccCC-------CCCceEEEecCcccc-CCCccceeEEEe---ccccccc
Q 036024 72 EFARNNGSIIIFDSAYAAYVTDGC--PRSIYEIPG-------AREVAIEISSFSKFS-GFTGVRLGWTVV---PEELLFS 138 (272)
Q Consensus 72 ~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~-------~~~~~i~~~s~sK~~-g~~g~r~G~~~~---~~~~~~~ 138 (272)
++|+++++++|+||+|+.+.+++. ..++..+.. ...++++++|+||.+ |++|+|+||+++ ++++
T Consensus 262 ~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l--- 338 (498)
T 3ihj_A 262 HFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEI--- 338 (498)
T ss_dssp HHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHH---
T ss_pred HHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHH---
Confidence 999999999999999999988753 445544311 123479999999999 789999999984 5555
Q ss_pred CCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc-----c----HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC
Q 036024 139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE-----G----LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN 208 (272)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 208 (272)
++.+..... ....++.++|.++..++..+ . .++.+++++.++++++.+.+.|+++ |+++..+++
T Consensus 339 -----~~~l~~~~~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~g 412 (498)
T 3ihj_A 339 -----KGQLVKLLS-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQG 412 (498)
T ss_dssp -----HHHHHHHHH-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCB
T ss_pred -----HHHHHHHHh-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCe
Confidence 566665554 34458889999888888741 1 1345678899999999999999998 999999999
Q ss_pred ceEEEeecC------------CCChHHH-HHHHHHhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 209 APYVWAHFP------------GRKSWDV-FAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 209 ~~~~~i~l~------------~~~~~~~-~~~ll~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
++|+|+.+. +..+.++ +.++++++||.+.||+.|+. .++.++|+++..+++++++++++|+++
T Consensus 413 g~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~ 489 (498)
T 3ihj_A 413 AMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDF 489 (498)
T ss_dssp SSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHH
T ss_pred EEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHH
Confidence 999998764 2233443 67888888999999999984 567899999988999999999999875
No 14
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=1.6e-37 Score=266.84 Aligned_cols=253 Identities=19% Similarity=0.207 Sum_probs=212.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|.|++..|.+. +...++..| +++++|.++++++.+++++. ++++++++++||||||.+++.+++++|+++|+++|+
T Consensus 109 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 188 (376)
T 3ezs_A 109 PTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDF 188 (376)
T ss_dssp CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred CEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCc
Confidence 67777777666 788888889 99999999876776655442 578999999999999999999999999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCC-----CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPG-----AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++|+||+|.++.+++.+.++..... ..+++++++|+||.+|++|+|+||+++++++ .+.+.......
T Consensus 189 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~~~ 260 (376)
T 3ezs_A 189 ILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRL--------LEKYKAFRAYL 260 (376)
T ss_dssp EEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHH--------HHHHHHHHTTT
T ss_pred EEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHH--------HHHHHHHHhhh
Confidence 9999999999888775555544321 3577899999999999999999999998877 66777666666
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI 234 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi 234 (272)
..+.+.+.+.++.+++.. .+++++.+++++++++.+.+.|+ ++. .+.+++++|+.++ +..++...|++++||
T Consensus 261 ~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~--~~~--~~~~~~~~~~~~~--~~~~~~~~l~~~~gi 332 (376)
T 3ezs_A 261 GYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK--NTL--IYPYSFYVYLPVQ--NGENFAKTLYQNEGI 332 (376)
T ss_dssp CCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--TCC--CCSBSSEEEEECS--CHHHHHHHHHHHHCC
T ss_pred cCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--CCC--CCCcceEEEEECC--CHHHHHHHHHHhCCE
Confidence 667899999999998875 35578899999999999999998 665 5568999999998 567788888875699
Q ss_pred EeeCCCCCC--CCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFG--PGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~--~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.||+.|+ ..+.+++|+++..+++++++++++|++++
T Consensus 333 ~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 372 (376)
T 3ezs_A 333 ITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYR 372 (376)
T ss_dssp BCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred EEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 999999998 45678999999779999999999998763
No 15
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=7.1e-37 Score=267.33 Aligned_cols=264 Identities=17% Similarity=0.271 Sum_probs=213.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.+++.++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 143 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 222 (427)
T 3dyd_A 143 QNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAAR 222 (427)
T ss_dssp CEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Confidence 56777777666 778888899 9999999876677777443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+|+++|+||+|.++.+++.. .++..+. ...++++++|+||.||++|+|+||++++++... ..+.+.+.+...... .
T Consensus 223 ~~~~~i~Deay~~~~~~g~~~~~~~~~~-~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~-~~~~i~~~l~~~~~~-~ 299 (427)
T 3dyd_A 223 QCVPILADEIYGDMVFSDCKYEPLATLS-TDVPILSCGGLAKRWLVPGWRLGWILIHDRRDI-FGNEIRDGLVKLSQR-I 299 (427)
T ss_dssp TTCCEEEECTTTTCBCSSCCCCCGGGGC-SSCCEEEEEESTTTSSCGGGCCEEEEEECSTTS-SHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEEcCchhhccCCCcCccHHHhC-CCCcEEEEeeccccCCCcCcceEEEEecCcchh-hHHHHHHHHHHHHhc-c
Confidence 99999999999998887643 3444443 235679999999999999999999999863200 001124455444333 3
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC------CCChHHHHHHH
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP------GRKSWDVFAEI 228 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~------~~~~~~~~~~l 228 (272)
.+++.++|.++.+++.....+++++++++++++++.+.+.|+++ |+.+..+++++|+|+.++ ..+..+++.++
T Consensus 300 ~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l 379 (427)
T 3dyd_A 300 LGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERL 379 (427)
T ss_dssp CCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHH
Confidence 55899999999999986566788999999999999999999998 899888888999999886 24567888888
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++++||.+.||+.|+. ++++|+++..+++++++++++|++++
T Consensus 380 ~~~~gV~v~~g~~~~~--~~~iRis~~~~~e~i~~~l~~l~~~l 421 (427)
T 3dyd_A 380 VAEQSVHCLPATCFEY--PNFIRVVITVPEVMMLEACSRIQEFC 421 (427)
T ss_dssp HHHHCEECEEGGGGTC--TTEEEEESCSCHHHHHHHHHHHHHHH
T ss_pred HHHCCEEEECCcccCC--CCeEEEEECCCHHHHHHHHHHHHHHH
Confidence 8777999999998864 68999999889999999999998763
No 16
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=2.6e-37 Score=266.57 Aligned_cols=257 Identities=19% Similarity=0.278 Sum_probs=211.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.+++ ++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 116 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~ 194 (386)
T 1u08_A 116 DEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAG 194 (386)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTT
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHH
Confidence 56677666555 778888888 9999999765 45556433 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+|+++|+||+|.++.+++. ..++..+.+..+++++++|+||.+|++|+|+||+++++++ .+.+........
T Consensus 195 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~~ 266 (386)
T 1u08_A 195 HEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPI--------SAEIRKVHQYLT 266 (386)
T ss_dssp SCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHH--------HHHHHHHHHHHT
T ss_pred cCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHH--------HHHHHHHHHhhc
Confidence 9999999999999887653 3344444222467899999999999899999999998877 566666555445
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---CChHHHHHHHHHhc
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---RKSWDVFAEILEKT 232 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~ 232 (272)
.+.+.+.|.++.++++.. .+++++.+++++++++++.+.|+++|+++..+++++++|+.++. .+..++...+++++
T Consensus 267 ~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~ 345 (386)
T 1u08_A 267 FSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEH 345 (386)
T ss_dssp SSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHS
T ss_pred cCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhC
Confidence 567888898888888743 56788999999999999999999989998888778999999985 35677777788777
Q ss_pred CeEeeCCCCCCC--CCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024 233 HITTVPGSGFGP--GGEEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 233 gi~v~~g~~~~~--~~~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
||.+.||..|+. .+++++|+++..+++++++++++|++
T Consensus 346 gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 346 GVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp CEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred CEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 999999988864 35789999998899999999999976
No 17
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=6.5e-37 Score=265.57 Aligned_cols=260 Identities=18% Similarity=0.237 Sum_probs=215.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCC----CCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP----GNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~----~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..|.+. +...++..| +++.+|.+. +.++.+|++.+ ++++++++++||||||.+++.+++++|++
T Consensus 127 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~ 206 (407)
T 3nra_A 127 DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAA 206 (407)
T ss_dssp CEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHH
Confidence 56777766665 777888888 999999853 23555664442 47899999999999999999999999999
Q ss_pred HHHHcCCEEEEcccCCccccCCCC-CCccccC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCP-RSIYEIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~-~~~~~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
+|+++|+++|+||+|..+.+++.. .++..+. ...+++++++|+||.+|++|+|+||+++++++ ++.+...
T Consensus 207 ~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~ 278 (407)
T 3nra_A 207 LAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAI--------IARMEKL 278 (407)
T ss_dssp HHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHH--------HHHHHHH
T ss_pred HHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHH--------HHHHHHH
Confidence 999999999999999998887643 3455554 45678899999999999999999999998877 6677766
Q ss_pred hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CChHHHHHH
Q 036024 151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RKSWDVFAE 227 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ 227 (272)
......+++.+.+.++.+++.. ...++++.+++++++++++.+.|+++ ++.+..+++++++|+.++. .+..++...
T Consensus 279 ~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (407)
T 3nra_A 279 QAIVSLRAAGYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKI 357 (407)
T ss_dssp HHHHTSSSCHHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHH
T ss_pred HhhhccCCChHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHH
Confidence 6666666788888888888773 33567888899999999999999998 8998888788999999974 466777788
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|++++||.+.||+.|++.+.+++|+++..+++++++++++|++++
T Consensus 358 l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~ 402 (407)
T 3nra_A 358 LRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLV 402 (407)
T ss_dssp HHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 877789999999999887889999999889999999999998763
No 18
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=4.3e-37 Score=267.04 Aligned_cols=260 Identities=20% Similarity=0.272 Sum_probs=215.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCC---------CCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP---------GNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQL 67 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~---------~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l 67 (272)
|.|++..|.+. |...+...| +++.+++++ +.++.+|++. .++++++++++||||||.+++++++
T Consensus 110 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l 189 (410)
T 3e2y_A 110 DEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQEL 189 (410)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHH
Confidence 56777776665 778888888 999999873 1345555332 2678999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH
Q 036024 68 EQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND 146 (272)
Q Consensus 68 ~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~ 146 (272)
++|+++|+++|+++|+||+|.++.+++. ..++..+....+++++++|+||.+|++|+|+||++++++. ++.
T Consensus 190 ~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~--------~~~ 261 (410)
T 3e2y_A 190 QVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHL--------IKH 261 (410)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHH--------HHH
T ss_pred HHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHH--------HHH
Confidence 9999999999999999999999888764 4466666656688999999999999999999999999887 666
Q ss_pred HHhhhhhccCCcchHHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-
Q 036024 147 FNRIICTCFNGASNIAQAGGLACLSS------EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR- 219 (272)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~- 219 (272)
+.........+.+.+.|.++.+++.+ ...+++++++++++++++.+.+.|+++|+.+..+++++++|+.++..
T Consensus 262 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 341 (410)
T 3e2y_A 262 LQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLG 341 (410)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGC
T ss_pred HHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhh
Confidence 76666666667899999999988873 23467889999999999999999999999998888999999988521
Q ss_pred ---C--------hHHHHHHHHHhcCeEeeCCCCCCCC-----CCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 220 ---K--------SWDVFAEILEKTHITTVPGSGFGPG-----GEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 220 ---~--------~~~~~~~ll~~~gi~v~~g~~~~~~-----~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+ ..+++.++++++||.+.||+.|+.. +.+++|++++.+++++++++++|+++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 342 ADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAW 409 (410)
T ss_dssp CCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHHHTC
T ss_pred cccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHhc
Confidence 1 2377788888889999999998642 36899999988999999999999874
No 19
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=6.9e-37 Score=267.45 Aligned_cols=261 Identities=20% Similarity=0.305 Sum_probs=213.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCC--------CcccCCCC-----CCCceEEEEecCCCccccCCCHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGN--------NFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLE 68 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~--------~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~ 68 (272)
|.|++..|.+. +...++..| +++.+|.+++. ++.+|++. .++++++++++|+||||.++++++++
T Consensus 126 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~ 205 (429)
T 1yiz_A 126 DEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELE 205 (429)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHH
Confidence 56777666555 777788888 99999998653 45556443 26789999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH
Q 036024 69 QLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF 147 (272)
Q Consensus 69 ~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~ 147 (272)
+|+++|+++|+++|+||+|.++.+++. ..++..+.+..++++++.|+||.+|++|+|+||+++++++ ++.+
T Consensus 206 ~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l 277 (429)
T 1yiz_A 206 VVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEAL--------LKNL 277 (429)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHH--------HHHH
T ss_pred HHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHH--------HHHH
Confidence 999999999999999999999887653 3455555434567899999999999899999999998877 5666
Q ss_pred HhhhhhccCCcchHHHHHHHHhccc-----cc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC--
Q 036024 148 NRIICTCFNGASNIAQAGGLACLSS-----EG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-- 219 (272)
Q Consensus 148 ~~~~~~~~~~~~~~~~~a~~~~l~~-----~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-- 219 (272)
.........+.+.+.|.++.++++. .. .+++++.+++++++++.+.+.|+++|+.+..+++++++|+.++..
T Consensus 278 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~ 357 (429)
T 1yiz_A 278 QMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDS 357 (429)
T ss_dssp HHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSSCT
T ss_pred HHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccccc
Confidence 6655555666888999989888875 22 467889999999999999999998899988877899999999752
Q ss_pred -----------ChHHHHHHHHHhcCeEeeCCCCCCCC-----CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 220 -----------KSWDVFAEILEKTHITTVPGSGFGPG-----GEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 220 -----------~~~~~~~~ll~~~gi~v~~g~~~~~~-----~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+..++..+|++++||.+.||+.|+.. +.+++|+++..+++++++++++|++++
T Consensus 358 ~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 358 KVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWK 426 (429)
T ss_dssp TTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHS
T ss_pred cccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 34567777877779999999888642 268999999889999999999999875
No 20
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=8.7e-37 Score=263.64 Aligned_cols=254 Identities=24% Similarity=0.359 Sum_probs=210.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.++++++.+|++. .++++++++++|+||||.+++.+++++|+++|++
T Consensus 126 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~ 205 (389)
T 1o4s_A 126 DEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKK 205 (389)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 56677666555 778888888 9999999865566666433 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
+|+++|+||+|.++.+++...++..+....+++++++|+||.+|++|+|+||+++++++ .+.+.........
T Consensus 206 ~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~--------~~~l~~~~~~~~~ 277 (389)
T 1o4s_A 206 RNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKV--------ATAVSKIQSHTTS 277 (389)
T ss_dssp HTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHHHHTC
T ss_pred cCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHH--------HHHHHHHhhhccc
Confidence 99999999999988876544566666443567899999999999899999999998877 5666666655555
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v 236 (272)
+++.+.|.++.+++... .++.+++++++++++.+.|+++|+++..+.+++++|+.++ .+..++...|++++||.+
T Consensus 278 ~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v 352 (389)
T 1o4s_A 278 CINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVR-GDDVKFCERLLEEKKVAL 352 (389)
T ss_dssp SCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECS-SCHHHHHHHHHHHHCEEC
T ss_pred CCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCC-CCHHHHHHHHHHHCCEEE
Confidence 67888999888888754 4788899999999999999998988887778889999987 456777888875669999
Q ss_pred eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.||..|+. ++++|+++..+++++++++++|++++
T Consensus 353 ~~g~~f~~--~~~~Ris~~~~~~~l~~~l~~l~~~l 386 (389)
T 1o4s_A 353 VPGSAFLK--PGFVRLSFATSIERLTEALDRIEDFL 386 (389)
T ss_dssp EEGGGGTC--TTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred eCchhcCC--CCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 99998875 46999999889999999999998763
No 21
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.5e-36 Score=265.17 Aligned_cols=258 Identities=21% Similarity=0.296 Sum_probs=208.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--------------CCCceEEEEe-cCCCccccCCCHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--------------TSRTDIIFFC-SPNNPTGHAATQN 65 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--------------~~~~~~i~~~-~p~nptG~~~~~~ 65 (272)
|.|++..|.+. |...++..| +++.+|++++ ++.+| +++ .+++++++++ +||||||.+++.+
T Consensus 133 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~ 211 (425)
T 2r2n_A 133 DNVLLDEPAYSGTLQSLHPLGCNIINVASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSE 211 (425)
T ss_dssp CEEEEESSCCHHHHHHHGGGTCEEEEECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHH
T ss_pred CEEEEeCCCcHHHHHHHHHcCCEEEEeCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHH
Confidence 66777777666 888888889 9999998754 44443 221 1368888874 9999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH
Q 036024 66 QLEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI 144 (272)
Q Consensus 66 ~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~ 144 (272)
++++|+++|+++|+++|+||+|.++.+++. ..++..+. ..+++++++|+||.+| +|+|+||+++++++ +
T Consensus 212 ~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l--------~ 281 (425)
T 2r2n_A 212 RKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMD-VDGRVIRADSFSKIIS-SGLRIGFLTGPKPL--------I 281 (425)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGC-TTSCEEEEEESTTTTC-STTCCEEEEEEHHH--------H
T ss_pred HHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccC-CCCCEEEEccchhhcc-CccceEEEecCHHH--------H
Confidence 999999999999999999999999887653 44566654 3468899999999998 99999999999887 6
Q ss_pred HHHHhhhhhccCCcchHHHHHHHHhcccc---c-HHHHHHHHHHHHHHHHHHHHHHHhC--CC-eEecCCCceEEEeecC
Q 036024 145 NDFNRIICTCFNGASNIAQAGGLACLSSE---G-LEAVHSVVDYYKENTKILIDTLASL--GI-KVYGGINAPYVWAHFP 217 (272)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~-~~~~~~~~~~~~~~~~~l~~~L~~~--g~-~~~~~~~~~~~~i~l~ 217 (272)
+.+.........+++.++|.++.++++.. . .++++++++.++++++.+.+.|++. |+ .+..+++|+|+|+.++
T Consensus 282 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~ 361 (425)
T 2r2n_A 282 ERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVK 361 (425)
T ss_dssp HHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEET
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeC
Confidence 67776666666678999999999998752 1 3678899999999999999999884 76 5667788999999998
Q ss_pred C-CChHHHHHHHHHhcCeEeeCCCCCCCC---CCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 218 G-RKSWDVFAEILEKTHITTVPGSGFGPG---GEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 218 ~-~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
. .+..+++.+.+.++||.+.||+.|+.. +.+++|++++ .+++++++++++|++++
T Consensus 362 ~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l 421 (425)
T 2r2n_A 362 GINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLI 421 (425)
T ss_dssp TCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 5 345554455556679999999999753 3589999986 69999999999998763
No 22
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=6.6e-37 Score=272.36 Aligned_cols=259 Identities=17% Similarity=0.197 Sum_probs=209.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..|.+. |...++..| +++.++++++++|.+|++.+ + ++++|++++||||||.+++.+++++|
T Consensus 183 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i 262 (500)
T 3tcm_A 183 DGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDI 262 (500)
T ss_dssp EEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHH
Confidence 56777777776 888888889 99999999888888886552 1 78999999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCC--CCCccc----cC--CCCCceEEEecCcccc-CCCccceeEEEe---ccccccc
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGC--PRSIYE----IP--GAREVAIEISSFSKFS-GFTGVRLGWTVV---PEELLFS 138 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~----~~--~~~~~~i~~~s~sK~~-g~~g~r~G~~~~---~~~~~~~ 138 (272)
+++|+++++++|+||+|+++.+++. ..++.. +. ....++++++|+||.+ |++|+|+||+++ ++++
T Consensus 263 ~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~--- 339 (500)
T 3tcm_A 263 VKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPV--- 339 (500)
T ss_dssp HHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTH---
T ss_pred HHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHH---
Confidence 9999999999999999999888643 334332 21 1224579999999999 899999999998 6666
Q ss_pred CCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc---------cHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC
Q 036024 139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE---------GLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN 208 (272)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 208 (272)
++.+..... ....++.++|.++..++... ..++.++++++++++++.+.+.|+++ |+.+..+++
T Consensus 340 -----~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g 413 (500)
T 3tcm_A 340 -----REQIYKIAS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEG 413 (500)
T ss_dssp -----HHHHHHHHH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCB
T ss_pred -----HHHHHHHHh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCe
Confidence 566655554 34558889999888888732 22567888899999999999999998 999999999
Q ss_pred ceEEEeecCC------------C-ChHHHHHHHHHhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 209 APYVWAHFPG------------R-KSWDVFAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 209 ~~~~~i~l~~------------~-~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
++|+|+.+.- . .+..++.++++++||.+.||+.|+. .+.+++|+++..+++++++++++|+++
T Consensus 414 ~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~ 490 (500)
T 3tcm_A 414 AMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVF 490 (500)
T ss_dssp TTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHH
T ss_pred EEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
Confidence 9999976541 1 1233456788888999999999984 567899999988889999999999875
No 23
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.3e-36 Score=267.07 Aligned_cols=257 Identities=18% Similarity=0.291 Sum_probs=210.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--------CCCceEEE-EecCCCccccCCCHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--------TSRTDIIF-FCSPNNPTGHAATQNQLEQLV 71 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--------~~~~~~i~-~~~p~nptG~~~~~~~l~~l~ 71 (272)
|.|++..|.+. +...++..| +++.+|.+++ ++.+| +++ .+++++++ +++||||||.+++.+++++|+
T Consensus 165 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~ 243 (448)
T 3aow_A 165 DIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLL 243 (448)
T ss_dssp CEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHH
Confidence 56777777665 778888889 9999999765 44443 322 13788886 469999999999999999999
Q ss_pred HHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 72 EFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 72 ~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
++|+++|+++|+||+|.++.+++. ..++..+. ..+++++++||||.+| +|+|+||+++++++ ++.+...
T Consensus 244 ~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~-~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l--------~~~l~~~ 313 (448)
T 3aow_A 244 ELASEYDFIVVEDDPYGELRYSGNPEKKIKALD-NEGRVIYLGTFSKILA-PGFRIGWMVGDPGI--------IRKMEIA 313 (448)
T ss_dssp HHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGC-TTSCEEEEEESTTTTC-GGGCCEEEEECHHH--------HHHHHHH
T ss_pred HHHHHcCCEEEEECCCccccCCCCCCcCHHhcC-CCCCEEEEccchhhcc-ccccEEEEEeCHHH--------HHHHHHH
Confidence 999999999999999999888654 34555653 3467899999999999 99999999999877 5666665
Q ss_pred hhhccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhC---CCeEecCCCceEEEeecC-CCChHHHH
Q 036024 151 ICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASL---GIKVYGGINAPYVWAHFP-GRKSWDVF 225 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~i~l~-~~~~~~~~ 225 (272)
......+++.+.|.++.+++.... .++++++++.++++++.+.+.|++. |+.+..+.+|+|+|+.++ +.+..++.
T Consensus 314 ~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~~~~~l~ 393 (448)
T 3aow_A 314 KQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKML 393 (448)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTCCHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCCCHHHHH
Confidence 555555678999999999998542 3778999999999999999999875 788888888999999998 45667788
Q ss_pred HHHHHhcCeEeeCCCCCCCC--CCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 226 AEILEKTHITTVPGSGFGPG--GEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~~--~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
..++++ ||.+.||..|++. +++++|+++.. +++++++++++|++++
T Consensus 394 ~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l 442 (448)
T 3aow_A 394 ERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETI 442 (448)
T ss_dssp HHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHH
T ss_pred HHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 888877 9999999988753 46899999865 7899999999998763
No 24
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=9.9e-37 Score=266.98 Aligned_cols=260 Identities=20% Similarity=0.292 Sum_probs=210.6
Q ss_pred cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..|.+. +...+. ..| ++++++.++++++.+|++.+ +++++|++++||||||.+++.+++++
T Consensus 136 d~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 215 (435)
T 3piu_A 136 EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYL 215 (435)
T ss_dssp CEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHH
Confidence 66777776665 666666 678 99999999877777775542 37899999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCCC-CCccccCCC---------CCceEEEecCccccCCCccceeEEEecccccccC
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEIPGA---------REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS 139 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~---------~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~ 139 (272)
|+++|+++|+++|+||+|.++.+++.. .++..+... ++++++++|+||.+|++|+|+||++++++.+
T Consensus 216 l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~--- 292 (435)
T 3piu_A 216 LLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMV--- 292 (435)
T ss_dssp HHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHH---
T ss_pred HHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHH---
Confidence 999999999999999999987776542 333333222 6788999999999999999999999966542
Q ss_pred CcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC
Q 036024 140 GFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP 217 (272)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~ 217 (272)
.+.+..... ..+.+.+.+.++.+++..... +++++.+++++++++++.+.|++.|+++..+++++++|+.++
T Consensus 293 ----~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~ 366 (435)
T 3piu_A 293 ----VAAATKMSS--FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMR 366 (435)
T ss_dssp ----HHHHHHHGG--GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECG
T ss_pred ----HHHHHHHhh--cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcc
Confidence 444443322 334778888888888875443 467888999999999999999999999988888899999997
Q ss_pred CC-------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 218 GR-------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 218 ~~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
.. ...++..++++++||.+.||+.|++.+++++|+++.. +++++++++++|++++
T Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l 429 (435)
T 3piu_A 367 HLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV 429 (435)
T ss_dssp GGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred cccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 42 3456778888888999999999988788999999976 8999999999998763
No 25
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.8e-37 Score=265.10 Aligned_cols=260 Identities=23% Similarity=0.267 Sum_probs=211.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCC-CCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG-NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|.+. +...++..| +++.+|.+++ .++.+|++. .++++++++++|+||||.+++.+++++|+++|+
T Consensus 111 d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~ 190 (411)
T 2o0r_A 111 SEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAV 190 (411)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 56777766555 777888888 9999998754 345566443 257899999999999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
++|+++|+||+|.++.+++. ..++..+....+++++++|+||.+|++|+|+||+++++++ .+.+.......
T Consensus 191 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~ 262 (411)
T 2o0r_A 191 AANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAEL--------IAGVRAAKQYL 262 (411)
T ss_dssp HTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHH--------HHHHHHHHHHH
T ss_pred HcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHH--------HHHHHHHHhhc
Confidence 99999999999999887653 3455555434567899999999999999999999998777 55665555444
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---CChHHHHHHHHHh
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---RKSWDVFAEILEK 231 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~ 231 (272)
..+.+.+.|.++.++++.. .+++++++++++++++++.+.|++.|+++..+++++++|+.++. .+..++..+++++
T Consensus 263 ~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 341 (411)
T 2o0r_A 263 SYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEK 341 (411)
T ss_dssp TSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 4557778888888888643 67788999999999999999999889998888788899999974 4567778888877
Q ss_pred cCeEeeCCCCCCC-C----------CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGP-G----------GEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~-~----------~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||+.|.. . +.+++|+++..+++++++++++|++++
T Consensus 342 ~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~ 393 (411)
T 2o0r_A 342 VGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLA 393 (411)
T ss_dssp HSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGG
T ss_pred CCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 7999999988843 2 467899999889999999999998763
No 26
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=1.9e-36 Score=260.49 Aligned_cols=260 Identities=18% Similarity=0.250 Sum_probs=214.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCC-cccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNN-FFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~-~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|.+. +...++..| +++.+|.+++++ |.+|++. .++++++++++||||||.+++.+++++|+++|+
T Consensus 107 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~ 186 (383)
T 3kax_A 107 ESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCT 186 (383)
T ss_dssp CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHH
T ss_pred CEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHH
Confidence 66777777666 777888888 999999985443 6666443 368999999999999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCC-CCCccccCCC-CCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhh
Q 036024 76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPGA-REVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~ 152 (272)
++|+++|+||+|.++.+++. ..++..+... .+++++++|+||.+|++|+|+||++++ +++ .+.+.....
T Consensus 187 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--------~~~~~~~~~ 258 (383)
T 3kax_A 187 KYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKL--------RQAFTSIQY 258 (383)
T ss_dssp HHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH--------HHHHHHHHH
T ss_pred HCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHH--------HHHHHHHHh
Confidence 99999999999999887764 3455555321 367899999999999999999999985 444 556655554
Q ss_pred h-ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecCC--CChHHHHHH
Q 036024 153 T-CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFPG--RKSWDVFAE 227 (272)
Q Consensus 153 ~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ 227 (272)
. ...+++.+++.++.+++.. ..+++++.+++++++++++.+.|++. |+++..+++++++|+.++. .+..++...
T Consensus 259 ~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (383)
T 3kax_A 259 RQGFHGLNIFAYTAMQSAYTE-CNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDERTKL 337 (383)
T ss_dssp HTTCCCCCHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCCCHHHHHHH
T ss_pred hcccCCCCHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccCCCHHHHHHH
Confidence 3 3346888999988888874 45778999999999999999999984 8999988888999999973 567788888
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|++++||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus 338 l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 338 LEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp HHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred HHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 876779999999999877789999999889999999999998864
No 27
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=6.5e-37 Score=263.01 Aligned_cols=255 Identities=19% Similarity=0.268 Sum_probs=211.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.+++ +|++.+ ++++++++++||||||.+++.+++++|+++|++
T Consensus 106 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~ 181 (377)
T 3fdb_A 106 SKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHR 181 (377)
T ss_dssp CCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 66777766666 778888889 9999999865 453331 568999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCC--CCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|+++|+||+|.++.+++ ...++..+.. .+++++++|+||.+|++|+|+||+++++ ++ .+.+......
T Consensus 182 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~--------~~~~~~~~~~ 252 (377)
T 3fdb_A 182 YDARVLVDEIHAPLVFDGQHTVAAGVSDTA-ASVCITITAPSKAWNIAGLKCAQIIFSNPSD--------AEHWQQLSPV 252 (377)
T ss_dssp TTCEEEEECTTGGGBSSSCCCCGGGSCHHH-HHHEEEEECSTTTTTCGGGCCEEEECCSHHH--------HHHHHHSCHH
T ss_pred cCCEEEEEcccchhhcCCCCCcccHHHccC-CCcEEEEEeChHhccCcchhheEEEeCCHHH--------HHHHHHHHHh
Confidence 999999999999988776 2334444322 4678999999999999999999988854 44 5666666555
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecCCC-ChHHHHHHHHH
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFPGR-KSWDVFAEILE 230 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~ 230 (272)
...+.+.+++.++.+++.. ..+++++++++++++++++.+.|++. |+++..+++++++|+.++.. .+.++...+++
T Consensus 253 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (377)
T 3fdb_A 253 IKDGASTLGLIAAEAAYRY-GTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIEGSPSEFFIE 331 (377)
T ss_dssp HHCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCCSCHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCCHHHHHHHHH
Confidence 5567899999988888874 35778999999999999999999985 89999988888999999852 34577888888
Q ss_pred hcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 231 KTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 231 ~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus 332 ~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l 373 (377)
T 3fdb_A 332 KAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAV 373 (377)
T ss_dssp HHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 889999999999876789999999889999999999998763
No 28
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=2.6e-36 Score=260.38 Aligned_cols=260 Identities=16% Similarity=0.273 Sum_probs=214.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. +...++..| +++.+|.+ .++.|.+|++. .++++++++++||||||.+++++++++|+++|
T Consensus 110 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 189 (391)
T 3dzz_A 110 DQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELC 189 (391)
T ss_dssp CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHH
T ss_pred CeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHH
Confidence 56777776666 777888888 99999996 34456666443 16899999999999999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhh
Q 036024 75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRII 151 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (272)
+++|+++|+||+|.++.+.+. ..++..+.. .+++++++.|+||.+|++|+|+||++++ +++ .+.+....
T Consensus 190 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~--------~~~~~~~~ 261 (391)
T 3dzz_A 190 AKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDL--------RARAEESF 261 (391)
T ss_dssp HHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHH--------HHHHHHHH
T ss_pred HHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHH--------HHHHHHHH
Confidence 999999999999999887763 455555542 2578999999999999999999999998 555 55665554
Q ss_pred h-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecC--CCChHHHHH
Q 036024 152 C-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFP--GRKSWDVFA 226 (272)
Q Consensus 152 ~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~ 226 (272)
. ....+.+.+++.++.+++.. ..+++++.+++++++++++.+.|++ + |+.+..+.+++++|+.++ +.+..++..
T Consensus 262 ~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (391)
T 3dzz_A 262 FLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCK 340 (391)
T ss_dssp HHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHH
T ss_pred HhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHH
Confidence 3 33445888888888888874 4577899999999999999999998 4 899998888999999997 356778888
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.|++++||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus 341 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 386 (391)
T 3dzz_A 341 YLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGV 386 (391)
T ss_dssp HHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 8876679999999999877789999999889999999999998763
No 29
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=5.1e-36 Score=258.52 Aligned_cols=260 Identities=18% Similarity=0.274 Sum_probs=213.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecC--CCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG--PGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~--~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|.+. +...++..| +++.+|.+ .+++|.+|++. +.+++++++++|+||||.+++++++++|+++|+
T Consensus 115 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 194 (391)
T 4dq6_A 115 DKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICL 194 (391)
T ss_dssp CEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHH
T ss_pred CEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhcCCEEEEECCCCCCCcCcCHHHHHHHHHHHH
Confidence 56777776666 778888889 99999998 45567777544 223899999999999999999999999999999
Q ss_pred HcCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhh
Q 036024 76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~ 152 (272)
++|+++|+||+|.++.+++. ..++..+.. ..+++++++|+||.+|++|+|+||+++++ ++ .+.+.....
T Consensus 195 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~--------~~~~~~~~~ 266 (391)
T 4dq6_A 195 KHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKD--------YKLLDDAFT 266 (391)
T ss_dssp HTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHH--------HHHHHHHHH
T ss_pred HcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHH--------HHHHHHHHH
Confidence 99999999999999887754 334444431 13678999999999999999999999987 55 556655543
Q ss_pred -hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecC--CCChHHHHHH
Q 036024 153 -TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFP--GRKSWDVFAE 227 (272)
Q Consensus 153 -~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ 227 (272)
....+++.+++.++.+++.. ..+++++.+++++++++++.+.|++ + |+.+..+++++++|+.++ +.+..++...
T Consensus 267 ~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (391)
T 4dq6_A 267 RIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDEELESI 345 (391)
T ss_dssp HTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCHHHHHHH
T ss_pred hhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCHHHHHHH
Confidence 23446788888888888874 4567899999999999999999988 4 899998888899999997 4567788888
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|++++||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus 346 l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 346 LVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp HHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 877779999999999877789999999889999999999998864
No 30
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=2e-36 Score=261.04 Aligned_cols=257 Identities=25% Similarity=0.376 Sum_probs=210.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...++..| +++.+|.+++.++.+|++. .++++++++++|+||||.+++.+++++|+++|++
T Consensus 115 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~ 194 (388)
T 1j32_A 115 DEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVE 194 (388)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 56777766555 777788888 9999999865566666443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+|+++|+||+|.++.+++. ..++..+.. ..+++++++|+||.+|++|+|+||+++++++ .+.+.......
T Consensus 195 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~ 266 (388)
T 1j32_A 195 AGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPL--------VKAATKIQGHS 266 (388)
T ss_dssp HTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHH--------HHHHHHHHHTT
T ss_pred cCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHH--------HHHHHHHHhhc
Confidence 9999999999999887653 234444431 1356799999999999899999999998877 56666666555
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHh
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEK 231 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~ 231 (272)
..+++.+.|.++.+++.. ..+++++.+++++++++++.+.|+++ |+++..+.+++++|+.++ +.+..++...|+++
T Consensus 267 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 345 (388)
T 1j32_A 267 TSNVCTFAQYGAIAAYEN-SQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQ 345 (388)
T ss_dssp TCSCCHHHHHHHHHHHHS-CSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCCCCCHHHHHHHHHHh
Confidence 566888899888888873 34677889999999999999999998 898888878889999886 34667788888776
Q ss_pred cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+||.+.||..|+. ++++|+++..+++++++++++|+++
T Consensus 346 ~gi~v~~g~~~~~--~~~iRis~~~~~~~i~~~~~~l~~~ 383 (388)
T 1j32_A 346 HQVATVPGAAFGA--DDCIRLSYATDLDTIKRGMERLEKF 383 (388)
T ss_dssp HCEECEEGGGGTC--TTBEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCEEEeChhhhCC--CCcEEEEecCCHHHHHHHHHHHHHH
Confidence 7999999998865 5789999988999999999999875
No 31
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=5e-36 Score=261.94 Aligned_cols=259 Identities=20% Similarity=0.268 Sum_probs=205.9
Q ss_pred cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..|.+. |...+. ..| +++++|.+.+.++.+|++.+ ++++++++++||||||.+++.+++++
T Consensus 133 d~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 212 (428)
T 1iay_A 133 DAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKS 212 (428)
T ss_dssp CEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHH
Confidence 56777776666 655444 577 99999997665676664431 36899999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCC-------CCceEEEecCccccCCCccceeEEEec-ccccccCC
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGA-------REVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSG 140 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~-------~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~ 140 (272)
|+++|+++|+++|+||+|.++.+++. ..++..+... .++++++.|+||.+|++|+|+||++++ ++.
T Consensus 213 l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~----- 287 (428)
T 1iay_A 213 VLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDV----- 287 (428)
T ss_dssp HHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHH-----
T ss_pred HHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHH-----
Confidence 99999999999999999998776643 2344444322 578899999999999999999999995 444
Q ss_pred cchHHHHHhhhhhccCCcchHHHHHHHHhccccc--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC
Q 036024 141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEG--LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG 218 (272)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~ 218 (272)
++.+..... ..+.+.++|.++.+++.... .+++++.+++++++++++.+.|+++|+++..+++|+|+|+.++.
T Consensus 288 ---~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~ 362 (428)
T 1iay_A 288 ---VNCARKMSS--FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRP 362 (428)
T ss_dssp ---HHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGG
T ss_pred ---HHHHHHHHh--cccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechh
Confidence 445544322 24578899999999998643 25778899999999999999999989888777789999999974
Q ss_pred C-------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 219 R-------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 219 ~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
. ...++...|++++||.+.||..|+..+++++|+++. .+++++++++++|++++
T Consensus 363 ~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l 424 (428)
T 1iay_A 363 LLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFV 424 (428)
T ss_dssp GCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred hcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 2 234667777777799999999887655789999986 69999999999998763
No 32
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.5e-36 Score=263.62 Aligned_cols=257 Identities=25% Similarity=0.321 Sum_probs=209.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.+++.++.+|++. .++++++++++|+||||.+++.+++++|+++|++
T Consensus 126 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~ 205 (406)
T 1xi9_A 126 DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGE 205 (406)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHH
Confidence 56677666555 777778888 9999999764567666443 2578999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCc-eEEEecCccccCCCccceeEEE--ecc----cccccCCcchHHHHHh
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREV-AIEISSFSKFSGFTGVRLGWTV--VPE----ELLFSSGFPVINDFNR 149 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~g~~g~r~G~~~--~~~----~~~~~~~~~~~~~~~~ 149 (272)
+|+++|+||+|.++.+++...++..+. .++ +++++|+||.+|++|+|+||++ +++ ++ ++.+..
T Consensus 206 ~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l--------~~~l~~ 275 (406)
T 1xi9_A 206 YEIPVISDEIYDLMTYEGEHISPGSLT--KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEV--------REAIDR 275 (406)
T ss_dssp HTCCEEEECTTTTCBSSSCCCCHHHHC--SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHH--------HHHHHH
T ss_pred cCCEEEEEcCccccccCCCCCCHHHcC--CCceEEEEeccccccCCCccEEEEEEEecCchhHHHH--------HHHHHH
Confidence 999999999999988754445566663 566 8999999999998999999999 777 55 556655
Q ss_pred hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC---CCChHHHH
Q 036024 150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP---GRKSWDVF 225 (272)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~---~~~~~~~~ 225 (272)
..... .+.+.+.|.++.++++.. .+++++++++++++++++.+.|+++ |+.+..+++++++|+.++ +.+..++.
T Consensus 276 ~~~~~-~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 353 (406)
T 1xi9_A 276 LARIR-LCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFV 353 (406)
T ss_dssp HHHHT-CCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSCSSHHHHH
T ss_pred HHHhh-cCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCCCCHHHHH
Confidence 54444 568888999888888633 4557889999999999999999988 888887777889998887 34567777
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
..+++++||.+.||..|+..+.+++|+++..+++++++++++|++++
T Consensus 354 ~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l 400 (406)
T 1xi9_A 354 LDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFM 400 (406)
T ss_dssp HHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 78875669999999988765578999999889999999999998753
No 33
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=3.3e-37 Score=266.85 Aligned_cols=250 Identities=14% Similarity=0.163 Sum_probs=193.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------CCCceEEEEecC-CCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------TSRTDIIFFCSP-NNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|++. |...++..| +++++|+..++++.+|++. .++++++++++| |||||.+++.+++++|+++
T Consensus 123 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~ 202 (405)
T 3k7y_A 123 ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEI 202 (405)
T ss_dssp CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHH
T ss_pred CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 78889888888 888999999 9999999544467777543 245678888855 9999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCCCC---CCccccCCCCCceEEEecCccccCCCccceeEEEe--c-ccccccCCcchHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCP---RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--P-EELLFSSGFPVINDF 147 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~-~~~~~~~~~~~~~~~ 147 (272)
|+++++++|+||+|.++.+++.. .++..+....+++++++||||+||++|+|+||+++ + ++... ++...+
T Consensus 203 ~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~----~~~~~l 278 (405)
T 3k7y_A 203 VLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKK----IVFNNL 278 (405)
T ss_dssp HHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHH----HHHHHH
T ss_pred HHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHH----HHHHHH
Confidence 99999999999999998876421 12333333457899999999999999999999865 2 33310 112233
Q ss_pred HhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHH----hCC----CeEecCCCceEEEe
Q 036024 148 NRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLA----SLG----IKVYGGINAPYVWA 214 (272)
Q Consensus 148 ~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~----~~g----~~~~~~~~~~~~~i 214 (272)
..........++.++|.++..++.+.. .++++++++.++++++.+.+.|+ ++| +++..+++|+|+|+
T Consensus 279 ~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~ 358 (405)
T 3k7y_A 279 CFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFV 358 (405)
T ss_dssp HHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEEC
T ss_pred HHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEec
Confidence 333334444567889998888887532 25678888999999999999999 776 67888899999999
Q ss_pred ecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 215 HFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 215 ~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
.++. +++.+| +++||.+.||. |||++. +++++++++++|++++
T Consensus 359 ~l~~----~~~~~L-~~~gV~v~p~~----------Ris~a~~~~~~i~~~~~~i~~~~ 402 (405)
T 3k7y_A 359 PLLA----KIAEHL-KTHHIYIINNG----------RINVSGITKNNVDYIADKICLSL 402 (405)
T ss_dssp GGGG----GGTTTT-TTTTEECCTTS----------EEEGGGCCTTHHHHHHHHHHHHH
T ss_pred CCCH----HHHHHH-HHCCEeecCCC----------eEEEeccCHHHHHHHHHHHHHHH
Confidence 8863 445666 88899998842 999964 7899999999998763
No 34
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.6e-35 Score=256.02 Aligned_cols=257 Identities=22% Similarity=0.251 Sum_probs=209.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcc-cC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFF-PD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~-~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...++..| +++.+|.++++++. ++ +++ .++++++++++|+||||.+++.+++++|+++|+++
T Consensus 127 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~ 206 (409)
T 2gb3_A 127 DEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERH 206 (409)
T ss_dssp CEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHc
Confidence 56777766555 777788888 99999998644655 33 333 25789999999999999999999999999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+||+|.++.+++...++ +.+..+++++++|+||.+|++|+|+||+++++ ++ .+.+........
T Consensus 207 ~~~li~Dea~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l--------~~~l~~~~~~~~- 275 (409)
T 2gb3_A 207 GLFLIVDEVYSEIVFRGEFASA--LSIESDKVVVIDSVSKKFSACGARVGCLITRNEEL--------ISHAMKLAQGRL- 275 (409)
T ss_dssp TCEEEEECTTTTCBCSSCCCCG--GGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHH--------HHHHHHHHHHSC-
T ss_pred CCEEEEECcccccccCCCCCCc--cccCCCCEEEEecchhccCCccceEEEEEECcHHH--------HHHHHHHHhccC-
Confidence 9999999999988776543443 22234567999999999999999999999998 66 566665555444
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecCCCChHHHHHHHHHh----
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFPGRKSWDVFAEILEK---- 231 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~~~~~~~~~~~ll~~---- 231 (272)
+.+.+.+.++.++++. ...++++++++++++++++.+.|+++|+.+ ..+.+++++|+.+++.+..++...|+++
T Consensus 276 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 354 (409)
T 2gb3_A 276 APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMD 354 (409)
T ss_dssp CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBT
T ss_pred CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccc
Confidence 6888999988888864 467788999999999999999999889888 7777889999999755667777888777
Q ss_pred -cCeEeeCCCCCCC---CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 232 -THITTVPGSGFGP---GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 232 -~gi~v~~g~~~~~---~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+||.+.||..|+. .+.+++|+++..+++++++++++|++++
T Consensus 355 ~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l 399 (409)
T 2gb3_A 355 GETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGL 399 (409)
T ss_dssp TEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred cCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 6999999998864 3468999999889999999999998753
No 35
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.2e-35 Score=257.01 Aligned_cols=255 Identities=21% Similarity=0.300 Sum_probs=202.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. |...++..| +++.+|++++ ++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 125 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~ 203 (398)
T 3ele_A 125 DEFITIAPYFPEYKVFVNAAGARLVEVPADTE-HFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEK 203 (398)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECCCTT-TSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEEecCCc-CCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 77888777666 778888889 9999999865 66667443 2679999999999999999999999999999999
Q ss_pred ------cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 77 ------NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 77 ------~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
+|+++|+||+|.++.+++...+.. ....+++++++|+||.+|++|+|+||++++++.... ..+...+...
T Consensus 204 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~--~~~~~~~~~~ 279 (398)
T 3ele_A 204 KSKEIGRPIFIIADEPYREIVYDGIKVPFV--TKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDK--AELYAAVCGA 279 (398)
T ss_dssp HHHHHTSCCEEEEECTTTTCBCTTCCCCCG--GGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTH--HHHHHHHHHH
T ss_pred hhhccCCCeEEEEeccccccccCCCCcCCh--HhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhH--HHHHHHHHHH
Confidence 999999999999988876433221 123467899999999999999999999999886320 1123333333
Q ss_pred hhh-ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024 151 ICT-CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL 229 (272)
Q Consensus 151 ~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll 229 (272)
... ...+++.+.|.++.+++.... .+++++++++++.+.|+++|+.+..+++++++|+.++..+..++...+
T Consensus 280 ~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 352 (398)
T 3ele_A 280 GRALGYVCAPSLFQKMIVKCQGATG------DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALEDDSNAFCEKA- 352 (398)
T ss_dssp HHHTTCCCSCHHHHHHHTTCTTCCC------CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSSSCHHHHHHHH-
T ss_pred hhhccccCCCHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCCCCHHHHHHHH-
Confidence 322 244577788888887776433 457888999999999998899999888889999999865666666655
Q ss_pred HhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 230 EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+++||.+.||+.|+. ++++|++++.+++++++++++|++++
T Consensus 353 ~~~gi~v~~g~~~~~--~~~iRis~~~~~e~i~~~l~~l~~~l 393 (398)
T 3ele_A 353 KEEDVLIVAADGFGC--PGWVRISYCVDREMIKHSMPAFEKIY 393 (398)
T ss_dssp HTTTEECEESGGGTC--TTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HHCCEEEeCccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 566999999998875 57999999889999999999998763
No 36
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=6.8e-36 Score=260.62 Aligned_cols=260 Identities=18% Similarity=0.278 Sum_probs=216.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|.+. +...+...| +++.+|++ .++++.+|++.+ ++++++++++||||||.+++++++++|+++|
T Consensus 144 d~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~ 223 (421)
T 3l8a_A 144 DAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELC 223 (421)
T ss_dssp EEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHH
Confidence 56776666555 777888888 99999987 455677775442 6899999999999999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhh
Q 036024 75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRII 151 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (272)
+++|+++|+||+|.++.+.+. ..++..+.. ..++++++.|+||.+|++|+|+||++++ +++ .+.+....
T Consensus 224 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l--------~~~~~~~~ 295 (421)
T 3l8a_A 224 KKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESL--------RRKFQYRQ 295 (421)
T ss_dssp HHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHH--------HHHHHHHH
T ss_pred HHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHH--------HHHHHHHH
Confidence 999999999999999888764 345555532 3477899999999999899999999998 555 55665554
Q ss_pred -hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CChHHHHHH
Q 036024 152 -CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RKSWDVFAE 227 (272)
Q Consensus 152 -~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ 227 (272)
.....+.+.+++.++.+++.. ..+++++.+++++++++++.+.|+++ ++.+..++++++.|++++. .+..++...
T Consensus 296 ~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 374 (421)
T 3l8a_A 296 LANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEK 374 (421)
T ss_dssp HHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHH
T ss_pred HhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHH
Confidence 334446888999988888873 56778999999999999999999986 8999998889999999973 466788888
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|++++||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus 375 l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 419 (421)
T 3l8a_A 375 LQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVF 419 (421)
T ss_dssp HHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred HHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 888889999999999877789999999889999999999999875
No 37
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=6.8e-36 Score=256.65 Aligned_cols=254 Identities=20% Similarity=0.296 Sum_probs=211.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|++++++|.+|++. .+++++|++++||||||.+++.+++++|+++|++
T Consensus 106 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~ 185 (375)
T 3op7_A 106 DHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASE 185 (375)
T ss_dssp CEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHT
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 66777777666 777888889 9999999877788777554 2689999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
||+++|+||+|..+.+.+ ..++... .+++++++|+||.+|++|+|+||+++++++ .+.+.........
T Consensus 186 ~~~~li~De~~~~~~~~~-~~~~~~~---~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l--------~~~~~~~~~~~~~ 253 (375)
T 3op7_A 186 VGAYILSDEVYRSFSELD-VPSIIEV---YDKGIAVNSLSKTYSLPGIRIGWVAANHQV--------TDILRDYRDYTMI 253 (375)
T ss_dssp TTCEEEEECCSCCCSSSC-CCCHHHH---CTTEEEEEESSSSSSCGGGCCEEEECCHHH--------HHHHTTTGGGTTS
T ss_pred cCCEEEEEcccccccccC-CCchhhh---cCCEEEEeEChhhcCCcccceEEEEeCHHH--------HHHHHHHHhhhcc
Confidence 999999999999877652 2233332 456799999999999999999999997777 6677766666666
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI 234 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi 234 (272)
+++.+.+.++...+. ...+++++.++.++++++.+.+.|++. ++.+..+.+++++|+.++ +.+..+++.++++++||
T Consensus 254 ~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 332 (375)
T 3op7_A 254 CAGVFDDLVAQLALA-HYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGV 332 (375)
T ss_dssp CCCHHHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCE
T ss_pred CCCcHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCE
Confidence 678888888888777 344677888999999999999999987 788888888888999887 44667888888877799
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.||+.|+. .+++|+++..+.+++++++++|++++
T Consensus 333 ~v~~g~~~~~--~~~iRi~~~~~~~~i~~~l~~l~~~l 368 (375)
T 3op7_A 333 LLVPGNRFER--DGYVRLGFACEQETLIKGLEKLSQFL 368 (375)
T ss_dssp ECEEGGGGTC--TTEEEECCCSCHHHHHHHHHHHHHHH
T ss_pred EEeChhhhCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999998875 68999999888899999999998763
No 38
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.3e-35 Score=254.45 Aligned_cols=251 Identities=25% Similarity=0.402 Sum_probs=204.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|.|++..|.+. +...++..| +++.+|.+.+ . +++ .++++++++++||||||.+++.+ |+++|+++|+
T Consensus 114 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~d~~-~----l~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~ 184 (370)
T 2z61_A 114 DEVLIQNPCYPCYKNFIRFLGAKPVFCDFTVE-S----LEEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIP 184 (370)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECSSHH-H----HHHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCS
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEeCCCHH-H----HHHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCC
Confidence 56777766655 777788888 8888882211 1 221 24789999999999999999966 9999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (272)
++|+||+|.++.+++.+.++..+.+..+++++++|+||.+|++|+|+||+++++++ .+.+.........+.+
T Consensus 185 ~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~~~~~~~~~ 256 (370)
T 2z61_A 185 YIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEI--------IEAILKLQQNLFISAP 256 (370)
T ss_dssp EEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHHHHTSSSC
T ss_pred EEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHH--------HHHHHHHHhhcccCCC
Confidence 99999999998877655566666445577899999999999899999999999877 6666666655555688
Q ss_pred hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024 160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG 239 (272)
Q Consensus 160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g 239 (272)
.+.|.++.++++....+++++.+++++++++++.+.|+++|+++..+++++++|+.++. +..++...|++++||.+.||
T Consensus 257 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g 335 (370)
T 2z61_A 257 TISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGE-DGREFAYKLLKEKFVALTPG 335 (370)
T ss_dssp HHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSS-CHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCC-CHHHHHHHHHHhCCEEEeCc
Confidence 99999888888741356788999999999999999999989888887788999999986 66777788875669999999
Q ss_pred CCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 240 SGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 240 ~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+.|+..+.+++|+++..+++++++++++|++++
T Consensus 336 ~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~~~l 368 (370)
T 2z61_A 336 IGFGSKGKNYIRISYANSYENIKEGLERIKEFL 368 (370)
T ss_dssp GGGCGGGSSBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 988754578999999889999999999998763
No 39
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=9.8e-36 Score=260.27 Aligned_cols=254 Identities=13% Similarity=0.138 Sum_probs=205.7
Q ss_pred cccccccCccc-chHHhcc-cc-eeEEeecCCCCCcccCCCCC-----C---CceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGK-YC-NIEYLECGPGNNFFPDLKGT-----S---RTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~-~g-~~~~~~~~~~~~~~~dl~~~-----~---~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..|.+. +...++. .| +++.+|+++++ +.+|++.+ + +++++++++||||||.+++.+++++|++
T Consensus 138 d~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 216 (430)
T 2x5f_A 138 DTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVE 216 (430)
T ss_dssp CEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHH
Confidence 66777776665 7788888 88 99999987643 55564442 2 7899999999999999999999999999
Q ss_pred HHHH-----cCCEEEEcccCCccccCCC-CCCcc-ccCCCCCc---eEEEecCccccCCCccceeEEEe---cccccccC
Q 036024 73 FARN-----NGSIIIFDSAYAAYVTDGC-PRSIY-EIPGAREV---AIEISSFSKFSGFTGVRLGWTVV---PEELLFSS 139 (272)
Q Consensus 73 ~~~~-----~~~~vi~D~~~~~~~~~~~-~~~~~-~~~~~~~~---~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~~~ 139 (272)
+|++ +|+++|+||+|.++.+++. ..++. .+.+..++ +++++|+||.+|++|+|+||+++ ++++
T Consensus 217 ~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~---- 292 (430)
T 2x5f_A 217 AIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTT---- 292 (430)
T ss_dssp HHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHH----
T ss_pred HHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHH----
Confidence 9999 9999999999999887654 33444 55433566 89999999999989999999999 7766
Q ss_pred CcchHHHHHhhhhh----ccCCcchHHHHHHHHhcc-cccH-HHHHHHHHHHHHHHHHHHHHHH----hCCCeEecCCCc
Q 036024 140 GFPVINDFNRIICT----CFNGASNIAQAGGLACLS-SEGL-EAVHSVVDYYKENTKILIDTLA----SLGIKVYGGINA 209 (272)
Q Consensus 140 ~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~l~-~~~~-~~~~~~~~~~~~~~~~l~~~L~----~~g~~~~~~~~~ 209 (272)
.+.+...... ...+++.+.|.++.++++ +..+ +++++.+++++++++.+.+.|+ +.|+++..++++
T Consensus 293 ----~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g 368 (430)
T 2x5f_A 293 ----KEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSG 368 (430)
T ss_dssp ----HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBS
T ss_pred ----HHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCce
Confidence 5555554443 556689999999999997 6522 4455699999999999999998 668888888788
Q ss_pred eEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 210 PYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 210 ~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
+++|+.+++.+..++...|++++||.+.|| +++++|+++. .+++++++++++|++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g------~~~~iRis~~~~~~e~i~~~~~~l~~~l 426 (430)
T 2x5f_A 369 YFMAIKVHDVDPEALRKHLIDKYSIGVIAL------NATDIRIAFSCVEKDDIPHVFDSIAKAI 426 (430)
T ss_dssp SEEEEEESSSCHHHHHHHHHHHHCEECEEC------SSSEEEEEGGGSCGGGHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHhCCEEEecC------CCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence 899999985566778888887569999997 3679999987 78999999999998763
No 40
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=9.2e-36 Score=260.78 Aligned_cols=264 Identities=18% Similarity=0.150 Sum_probs=209.3
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
.|++..|.+. +...++..| +++.+++++ .++.+|++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 135 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~ 213 (437)
T 3g0t_A 135 GTLFIDPGFNLNKLQCRILGQKFESFDLFE-YRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATK 213 (437)
T ss_dssp CEEEEESCCHHHHHHHHHHTCCCEEEEGGG-GCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHhHHHHHHHcCCEEEEEeecC-CCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 6777766665 778888889 999999984 366666332 3688999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCc-------cccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH---
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSI-------YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND--- 146 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~--- 146 (272)
+|+++|+||+|+++.+++ ..++ ..+.+..+++++++|+||.+|++|+|+||++++++++.+....+...
T Consensus 214 ~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 292 (437)
T 3g0t_A 214 HDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGR 292 (437)
T ss_dssp TTCEEEEECTTTTCCTTS-CCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSC
T ss_pred CCcEEEEEcchhhcccCC-CcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccc
Confidence 999999999999877763 2233 44443467889999999999999999999999987732000000000
Q ss_pred -------HHhhhhhccCCcchHHHHHHHHhccccc--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEe------cC-CCce
Q 036024 147 -------FNRIICTCFNGASNIAQAGGLACLSSEG--LEAVHSVVDYYKENTKILIDTLASLGIKVY------GG-INAP 210 (272)
Q Consensus 147 -------~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~------~~-~~~~ 210 (272)
+.........+.+.+++.++.+++.... ..++++.+++++++++.+.+.|+++|+.+. .+ .+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 372 (437)
T 3g0t_A 293 LRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGF 372 (437)
T ss_dssp SBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSS
T ss_pred cchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeE
Confidence 5444555556688999999999887432 122789999999999999999999999888 34 7899
Q ss_pred EEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHh
Q 036024 211 YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEAL 271 (272)
Q Consensus 211 ~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~ 271 (272)
++|+.+++.+..++...|.++ ||.+.|+..|+...++++|+++.. +++++++++++|+++
T Consensus 373 ~~~~~~~~~~~~~l~~~L~~~-gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~ 433 (437)
T 3g0t_A 373 YFTVGYKGMDSSKLIEKFVRY-GMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQML 433 (437)
T ss_dssp EEEEEETTCCHHHHHHHHHHT-TEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHHHc-CeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHH
Confidence 999999866777888887766 999999999876555889999865 899999999999875
No 41
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=2.3e-35 Score=253.93 Aligned_cols=254 Identities=24% Similarity=0.323 Sum_probs=206.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecC--CCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG--PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~--~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. +...++..| +++.+|.+ ++ ++.+|++. .++++++++++|+||||.+++.+++++|+++|
T Consensus 103 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~ 181 (381)
T 1v2d_A 103 DEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLA 181 (381)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHH
Confidence 55666666555 777788888 99999986 33 34555332 26789999999999999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+++|+++|+||+|.++.++..+.++..+ ..+++++++|+||.+|++|+|+||+++++++ ++.+.......
T Consensus 182 ~~~~~~li~De~~~~~~~g~~~~~~~~~--~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~~~~ 251 (381)
T 1v2d_A 182 RAHDLFLISDEVYDELYYGERPRRLREF--APERTFTVGSAGKRLEATGYRVGWIVGPKEF--------MPRLAGMRQWT 251 (381)
T ss_dssp HHTTCEEEEECTTTTCBSSSCCCCHHHH--CTTTEEEEEEHHHHTTCGGGCCEEEECCTTT--------HHHHHHHHHHH
T ss_pred HHcCCEEEEEcCccccccCCCCCCHHHh--cCCCEEEEeechhhcCCcccceEEEEeCHHH--------HHHHHHHHhhc
Confidence 9999999999999988773334455554 3467899999999999899999999998877 56666555544
Q ss_pred cCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcC
Q 036024 155 FNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTH 233 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~g 233 (272)
..+.+.+.|.++.+++.... .+++++.+++++++++++.+.|++.|+++..+++++++|+.++..+ +.++++++|
T Consensus 252 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~----~~~~l~~~g 327 (381)
T 1v2d_A 252 SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWD----AFRLVEEAR 327 (381)
T ss_dssp TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTCC----HHHHHHHTC
T ss_pred ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChHh----HHHHHHhCC
Confidence 55678889988888887432 3577889999999999999999999999988877899999998542 566677779
Q ss_pred eEeeCCCCCCC--CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 234 ITTVPGSGFGP--GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 234 i~v~~g~~~~~--~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|.+.||..|+. .+.+++|+++..+++++++++++|++++
T Consensus 328 i~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l~~~l 368 (381)
T 1v2d_A 328 VALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVV 368 (381)
T ss_dssp EECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred EEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 99999998874 3468999999779999999999998864
No 42
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=2.1e-35 Score=257.01 Aligned_cols=261 Identities=20% Similarity=0.315 Sum_probs=206.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|++++.++.+|++. .++++++++++|+||||.+++.+++++|+++|++
T Consensus 129 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 208 (416)
T 1bw0_A 129 DYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEE 208 (416)
T ss_dssp CEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHH
Confidence 56777776665 888888889 9999998766566667443 2578899999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-----CCCccccCCCCCceEEEecCccccCCCccceeEEEeccc--ccccCCcchHHHHHh
Q 036024 77 NGSIIIFDSAYAAYVTDGC-----PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE--LLFSSGFPVINDFNR 149 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~--~~~~~~~~~~~~~~~ 149 (272)
+|+++|+||+|.++.+++. ..++..+. ..+++++++|+||.++++|+|+||++++++ .+. .+...+..
T Consensus 209 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~----~~~~~~~~ 283 (416)
T 1bw0_A 209 LRLPLFSDEIYAGMVFKGKDPNATFTSVADFE-TTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGP----SFLEGLKR 283 (416)
T ss_dssp HTCCEEEECTTTTCBCCSSCTTCCCCCTTSSC-CSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCH----HHHHHHHH
T ss_pred cCCEEEEEccccccccCCCCCCCCccCHHHcc-CCCcEEEEecchhhCCCCCceEEEEEeeCchhhHH----HHHHHHHH
Confidence 9999999999999877653 23444432 234679999999999889999999999875 311 11222222
Q ss_pred hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC------CChH
Q 036024 150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG------RKSW 222 (272)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~------~~~~ 222 (272)
.. ....+.+.+.|.++.++++.....++++.+++++++++++.+.|+++ |+.+..+.+++++|+.++. .+..
T Consensus 284 ~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (416)
T 1bw0_A 284 VG-MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDV 362 (416)
T ss_dssp HH-HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHH
T ss_pred Hh-ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcCCCCCHH
Confidence 21 12345888999999999875456778899999999999999999988 8888877789999998862 3566
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++...+++++||.+.||+.|+. ++++|+++..+++++++++++|++++
T Consensus 363 ~~~~~l~~~~gi~v~~g~~f~~--~~~iRis~~~~~e~l~~~l~~l~~~l 410 (416)
T 1bw0_A 363 EFFEKLLEEENVQVLPGTIFHA--PGFTRLTTTRPVEVYREAVERIKAFC 410 (416)
T ss_dssp HHHHHHHHHHCEECEEGGGGTC--TTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEecccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 7777787677999999998864 57999999888999999999998763
No 43
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=9.7e-36 Score=257.69 Aligned_cols=260 Identities=16% Similarity=0.195 Sum_probs=208.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCC-CCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP-GNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|.+. +...+...| +++.+|.++ +++|.+|++. .++++++++++||||||.+++.+++++|+++|
T Consensus 114 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~ 193 (399)
T 1c7n_A 114 DGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIV 193 (399)
T ss_dssp CEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHH
T ss_pred CEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHH
Confidence 56777776655 777888888 999999863 3345566433 16789999999999999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHHhhh
Q 036024 75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFNRII 151 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~ 151 (272)
+++|+++|+||+|.++.+++. ..++..+.. ..+++++++|+||.+|++|+|+||++++++ + .+.+....
T Consensus 194 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--------~~~l~~~~ 265 (399)
T 1c7n_A 194 LKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDI--------RERFTKSR 265 (399)
T ss_dssp HHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH--------HHHHHHHH
T ss_pred HHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHH--------HHHHHHHH
Confidence 999999999999999887653 344544421 136789999999999999999999999754 5 55665555
Q ss_pred hhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecCC--CChHHHHH
Q 036024 152 CTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFPG--RKSWDVFA 226 (272)
Q Consensus 152 ~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~ 226 (272)
.... .+.+.+++.++.+++... .+++++.+++++++++++.+.|++ + |+.+..+.+++++|+.++. .+..++..
T Consensus 266 ~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (399)
T 1c7n_A 266 DATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAMEE 344 (399)
T ss_dssp HHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHHH
T ss_pred hhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHHHH
Confidence 4432 357888999888888743 577899999999999999999998 6 8888888788888999973 46677777
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.|++++||.+.||+.|++.+++++|+++..+++++++++++|++++
T Consensus 345 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l 390 (399)
T 1c7n_A 345 FMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKAL 390 (399)
T ss_dssp HHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHH
Confidence 7776779999999998765678999999888899999999998753
No 44
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=2.2e-34 Score=245.85 Aligned_cols=251 Identities=17% Similarity=0.264 Sum_probs=202.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|.|++..|.+. +...++..| +++.+|+++++++.++ +++ ..+++++++++||||||.+++.+++++|+++|+++|+
T Consensus 99 d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 178 (361)
T 3ftb_A 99 EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKK 178 (361)
T ss_dssp SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTTCSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCC
Confidence 67777776665 778888889 9999999987777764 322 2228999999999999999999999999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEE-ecccccccCCcchHHHHHhhhhhccCCc
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLFSSGFPVINDFNRIICTCFNGA 158 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (272)
++|+||+|.++.++ ...+.....+..+++++++|+||.+|++|+|+||++ .++++ .+.+..... ..+.
T Consensus 179 ~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~--------~~~~~~~~~--~~~~ 247 (361)
T 3ftb_A 179 TIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEI--------AAKIKAKQN--PWNI 247 (361)
T ss_dssp EEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHH--------HHHHHTTSC--TTCS
T ss_pred EEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHH--------HHHHHhhCC--CCCC
Confidence 99999999988876 444555554556788999999999999999999998 66666 556655444 3458
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v 236 (272)
+.+++.++.+++++ .+++++.+++++++++++.+.|+++ ++. +.++ .+.++|+.+++.+..++...|.++ ||.+
T Consensus 248 ~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~-gi~v 323 (361)
T 3ftb_A 248 NCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSP-HANFVLCRLENISGEKLYDSLLKE-DIVI 323 (361)
T ss_dssp CHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC-SSSEEEEEESSSCHHHHHHHHHTT-TEEC
T ss_pred CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCC-CCeEEEEEcCCCCHHHHHHHHHHC-CeEE
Confidence 88999999999984 4778999999999999999999998 787 6664 677899999875677777777776 9999
Q ss_pred eCCCCCCCCCCCeEEEEccCCHHH---HHHHHHHHHH
Q 036024 237 VPGSGFGPGGEEYIRISGFGHRES---ILEASRRLEA 270 (272)
Q Consensus 237 ~~g~~~~~~~~~~~R~s~~~~~~~---i~~~l~~l~~ 270 (272)
.||+.|+..+++++|+++. ++++ +.++++++.+
T Consensus 324 ~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 324 RRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp EECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred eeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 9999998777899999986 4444 5555555444
No 45
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.8e-34 Score=246.28 Aligned_cols=247 Identities=22% Similarity=0.274 Sum_probs=195.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..|.+. |...++..| +++.+|+++ ++.+|++. ..+++++++++||||||.+++.+++++|+++|+ +
T Consensus 101 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~ 177 (356)
T 1fg7_A 101 DAILYCPPTYGMYSVSAETIGVECRTVPTLD--NWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-G 177 (356)
T ss_dssp CEEEECSSSCTHHHHHHHHHTCEEEECCCCT--TSCCCHHHHHTSCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-T
T ss_pred CEEEEeCCChHHHHHHHHHcCCEEEEeeCCC--CCCCCHHHHHHHhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-C
Confidence 67788776665 888888888 999999874 34455332 237899999999999999999999999999999 9
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (272)
++++|+||+|.++.. ..++..+....+++++++|+||.+|++|+|+||+++++++ ++.+...... .+
T Consensus 178 ~~~li~De~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~~--~~ 244 (356)
T 1fg7_A 178 KAIVVADEAYIEFCP---QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV--------INLLMKVIAP--YP 244 (356)
T ss_dssp TCEEEEECTTGGGSG---GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH--------HHHHHHHSCS--SC
T ss_pred CCEEEEEccchhhcC---CCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH--------HHHHHHhcCC--CC
Confidence 999999999998762 1233333333467899999999999999999999998877 5556544332 35
Q ss_pred cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v 236 (272)
.+.++|.++.+++.+...+++++.+++++++++++.+.|++++ +....+.+++|+|+.++ +..++...| .++||.+
T Consensus 245 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L-~~~gI~v 321 (356)
T 1fg7_A 245 LSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--ASSAVFKSL-WDQGIIL 321 (356)
T ss_dssp SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--THHHHHHHH-HHTTEEC
T ss_pred CCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC--CHHHHHHHH-HHCCEEE
Confidence 8889999999999854444588999999999999999999986 22334457899999997 556677777 5669999
Q ss_pred eC-CCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 237 VP-GSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 237 ~~-g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+ |..|+. .+++|+++. +++++++++++|++++
T Consensus 322 ~~~g~~~~~--~~~iRis~~-~~~e~~~~~~~l~~~~ 355 (356)
T 1fg7_A 322 RDQNKQPSL--SGCLRITVG-TREESQRVIDALRAEQ 355 (356)
T ss_dssp EECTTSTTC--TTEEEEECC-CHHHHHHHHHHHHTCC
T ss_pred EECCCCCCC--CCeEEEEeC-CHHHHHHHHHHHHhhc
Confidence 99 887764 469999986 6889999999998763
No 46
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.6e-35 Score=258.75 Aligned_cols=259 Identities=12% Similarity=0.085 Sum_probs=207.2
Q ss_pred ccccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC---CCCceEEEEe-cCCCccccCCCHHHHHHHHHHH-
Q 036024 3 IDSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG---TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFA- 74 (272)
Q Consensus 3 ~d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~---~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~- 74 (272)
-|.|++..|.+. |...++..| +++++|++++ ++.+| +++ .+++++++++ +||||||.+++.+++++|+++|
T Consensus 133 gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~ 211 (427)
T 3ppl_A 133 TVKWICPVPGYDRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMET 211 (427)
T ss_dssp CCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT-EECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCC
T ss_pred CCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC-CCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHh
Confidence 377888888777 888888999 9999999865 44443 322 2678999877 8899999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCCCCC---Ccccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPR---SIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~---~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~ 148 (272)
+++|+++|+||+|.++.+++.+. ++..+ .+..+++++++||||. +++|+|+||+++++++ ++.+.
T Consensus 212 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~~~~~~l--------~~~~~ 282 (427)
T 3ppl_A 212 AAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFFLTSAEN--------RKWYT 282 (427)
T ss_dssp SSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEEECCHHH--------HHHHH
T ss_pred hcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEEEcCHHH--------HHHHH
Confidence 99999999999999877765432 33333 2356789999999999 5699999999999887 67777
Q ss_pred hhhhhccCCcchHHHHHHHHhccc-cc-HHHHHHHHHHHHHHHHHHHHHHHh----C-CCeEecCCCceEEEeecCCCCh
Q 036024 149 RIICTCFNGASNIAQAGGLACLSS-EG-LEAVHSVVDYYKENTKILIDTLAS----L-GIKVYGGINAPYVWAHFPGRKS 221 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~-~~-~~~~~~~~~~~~~~~~~l~~~L~~----~-g~~~~~~~~~~~~~i~l~~~~~ 221 (272)
........+++.+.|.++.+++.. .. .+++++.++.++++++.+.+.|.+ + ++.+..+++|+|+|+.++..+.
T Consensus 283 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~ 362 (427)
T 3ppl_A 283 GHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTA 362 (427)
T ss_dssp HHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTTCH
T ss_pred HHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcchH
Confidence 777666777899999999999986 22 377889999999999999888865 2 5778788899999999986555
Q ss_pred HHHHHHHHHhcCeEeeC-CCCCCC---CCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 222 WDVFAEILEKTHITTVP-GSGFGP---GGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 222 ~~~~~~ll~~~gi~v~~-g~~~~~---~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
.++.. +++++||.+.| |..|+. .+++++|+++.. +++++++++++|++++
T Consensus 363 ~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l 417 (427)
T 3ppl_A 363 SRVAE-LAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCV 417 (427)
T ss_dssp HHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHH
Confidence 55554 55666999999 555542 357899999866 7899999999998763
No 47
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.2e-35 Score=266.10 Aligned_cols=261 Identities=20% Similarity=0.253 Sum_probs=196.3
Q ss_pred cccccccCccc-chHH--hcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDE--VGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~--~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|++. |... +...| ++++++.+++++|.+|++.+ ++++++++++||||||.+++.+++++|+++|
T Consensus 195 d~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a 274 (546)
T 2zy4_A 195 DKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIV 274 (546)
T ss_dssp CEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHH
T ss_pred CEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHH
Confidence 56788877766 6654 34456 89999998887888885442 6789999999999999999999999999999
Q ss_pred --HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc-ccccCCcc--------h
Q 036024 75 --RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFP--------V 143 (272)
Q Consensus 75 --~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~--------~ 143 (272)
++++++||+||+|.++.++ +.++... ..+++++++||||.+|++|+|+||++++++ ++...... +
T Consensus 275 ~~~~~~~~ii~De~y~~~~~~--~~s~~~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l 350 (546)
T 2zy4_A 275 AEHRPDLMILTDDVYGTFADD--FQSLFAI--CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVAL 350 (546)
T ss_dssp HHTCTTCEEEEECTTGGGSTT--CCCHHHH--CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHH
T ss_pred HhccCCcEEEEeCcchhhccc--CcCHHHh--CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHH
Confidence 7889999999999988753 4455444 246889999999999999999999999886 42110000 0
Q ss_pred HHHHHh--------------------hhhhccCCcchHHHHHH-----HHhcccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024 144 INDFNR--------------------IICTCFNGASNIAQAGG-----LACLSSEGLEAVHSVVDYYKENTKILIDTLAS 198 (272)
Q Consensus 144 ~~~~~~--------------------~~~~~~~~~~~~~~~a~-----~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 198 (272)
...+.. .......+.+.+.|.++ .+++. ....+.+++++.++++++.+.+.|.
T Consensus 351 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~-~~~~~~~~~r~~~~~r~~~l~~~L~- 428 (546)
T 2zy4_A 351 DHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMD-EADEYKHTLKQLIRRRETTLYRELG- 428 (546)
T ss_dssp HHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHHGGGT-
T ss_pred HHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 000110 00122335677777753 23444 3357788999999999999999996
Q ss_pred CCCeEecCCCceEEEeecCC-----------------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHH
Q 036024 199 LGIKVYGGINAPYVWAHFPG-----------------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRES 260 (272)
Q Consensus 199 ~g~~~~~~~~~~~~~i~l~~-----------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~ 260 (272)
.++.+.++++++|+|++++. .++.+.+.++++++||.+.||+.|+. +.+++|+++.. ++++
T Consensus 429 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~-~~~~iRis~~~~~~e~ 507 (546)
T 2zy4_A 429 MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGS-NRPSGRASLANLNEYE 507 (546)
T ss_dssp SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTC-SSCEEEEESSSSCHHH
T ss_pred CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCC-CCCeEEEEeccCCHHH
Confidence 56666677889999999852 13455667778888999999999986 46889999876 8889
Q ss_pred HHHHHHHHHHh
Q 036024 261 ILEASRRLEAL 271 (272)
Q Consensus 261 i~~~l~~l~~~ 271 (272)
+++++++|+++
T Consensus 508 i~~~~~~l~~~ 518 (546)
T 2zy4_A 508 YAAIGRALRKM 518 (546)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 48
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.6e-35 Score=265.20 Aligned_cols=263 Identities=19% Similarity=0.184 Sum_probs=207.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCC--CCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP--GNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~--~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|.+. |...+...| +++.++++. +.++.+|++. .++++++++++||||||.+++.+++++|+++|
T Consensus 194 d~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la 273 (533)
T 3f6t_A 194 DKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAV 273 (533)
T ss_dssp CEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHH
T ss_pred CEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 66777777666 777777788 899998875 5567777544 26899999999999999999999999999999
Q ss_pred H-HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc-----ccccCC--------
Q 036024 75 R-NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-----LLFSSG-------- 140 (272)
Q Consensus 75 ~-~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-----~~~~~~-------- 140 (272)
+ ++++++|+||+|.++.++ ..++... ..+++++++||||.+|++|+|+||++++++ ++....
T Consensus 274 ~~~~~~~li~De~y~~~~~~--~~~~~~~--~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~ 349 (533)
T 3f6t_A 274 EKNPKLMIISDEVYGAFVPN--FKSIYSV--VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLH 349 (533)
T ss_dssp HHCTTCEEEEECTTGGGSTT--CCCHHHH--SGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHH
T ss_pred HhCCCCEEEEcCCccccccC--ccCHhhc--CCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHH
Confidence 9 689999999999987764 3344444 347889999999999999999999999887 211100
Q ss_pred ----------------cchHHHHHhhhhhccCCcchHHHHH----HHHhcc-----cccHHHHHHHHHHHHHHHHHHHHH
Q 036024 141 ----------------FPVINDFNRIICTCFNGASNIAQAG----GLACLS-----SEGLEAVHSVVDYYKENTKILIDT 195 (272)
Q Consensus 141 ----------------~~~~~~~~~~~~~~~~~~~~~~~~a----~~~~l~-----~~~~~~~~~~~~~~~~~~~~l~~~ 195 (272)
.++.+.+.........+++.+.|.+ +...+. ....++++++++.++++++.+.+.
T Consensus 350 ~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~ 429 (533)
T 3f6t_A 350 KRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDA 429 (533)
T ss_dssp HHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 0011222334445556678888887 445554 234578899999999999999999
Q ss_pred HHhCCCeEecCCCceEEEeecCC-----------------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-C
Q 036024 196 LASLGIKVYGGINAPYVWAHFPG-----------------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-H 257 (272)
Q Consensus 196 L~~~g~~~~~~~~~~~~~i~l~~-----------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~ 257 (272)
|. .++.+..+++++|+|+.++. .++.+++.++++++||.+.||+.|+. +.+++|+|++. +
T Consensus 430 L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~-~~~~iRls~a~~~ 507 (533)
T 3f6t_A 430 MQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGA-KPGELRVSQANLP 507 (533)
T ss_dssp HT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECS-STTEEEEESSSSC
T ss_pred cC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCC-CCCEEEEEEeeCC
Confidence 98 88888888899999999863 35668888899888999999999986 36899999974 8
Q ss_pred HHHHHHHHHHHHHhC
Q 036024 258 RESILEASRRLEALF 272 (272)
Q Consensus 258 ~~~i~~~l~~l~~~l 272 (272)
++++++++++|++++
T Consensus 508 ~e~i~~~i~~L~~~l 522 (533)
T 3f6t_A 508 TEDYALIGKQVLELL 522 (533)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998763
No 49
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=3.8e-35 Score=255.99 Aligned_cols=256 Identities=14% Similarity=0.100 Sum_probs=199.5
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--C-CCceEEE-EecCCCccccCCCHHHHHHHHHHHH-H
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--T-SRTDIIF-FCSPNNPTGHAATQNQLEQLVEFAR-N 76 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~-~~~~~i~-~~~p~nptG~~~~~~~l~~l~~~~~-~ 76 (272)
.|++..|.+. |...++..| +++++|++++ ++.+| +++ . +++++++ +++||||||.+++.+++++|+++|+ +
T Consensus 133 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~ 211 (422)
T 3d6k_A 133 KWLCPVPGYDRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAA 211 (422)
T ss_dssp EEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSS
T ss_pred EEEEeCCccHHHHHHHHHcCCEEEecCCCCC-CCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhc
Confidence 4777777666 888888889 9999999865 44333 222 1 3788888 5699999999999999999999999 9
Q ss_pred cCCEEEEcccCCc--cccCCC-CCCcccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 77 NGSIIIFDSAYAA--YVTDGC-PRSIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 77 ~~~~vi~D~~~~~--~~~~~~-~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
+|+++|+||+|.+ +..++. ..++..+ .+..+++++++||||. +.||+|+||+++++++ ++.+...
T Consensus 212 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~l--------~~~l~~~ 282 (422)
T 3d6k_A 212 PDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKEN--------IEWYASH 282 (422)
T ss_dssp TTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHHH--------HHHHHHH
T ss_pred cCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHHH--------HHHHHHH
Confidence 9999999999985 443321 2344222 2345789999999999 5699999999999877 6677776
Q ss_pred hhhccCCcchHHHHHHHHhccccc--HHHHHHHHHHHHHHHHHHHHHHHh----CC-CeEecCCCceEEEeecCCCChHH
Q 036024 151 ICTCFNGASNIAQAGGLACLSSEG--LEAVHSVVDYYKENTKILIDTLAS----LG-IKVYGGINAPYVWAHFPGRKSWD 223 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~~~~~~~~~~i~l~~~~~~~ 223 (272)
......+++.++|.++.+++.+.+ .+++++.++.++++++.+.+.|.+ +| +.+..+++|+|+|+.++..+. +
T Consensus 283 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~-~ 361 (422)
T 3d6k_A 283 ANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTA-S 361 (422)
T ss_dssp HHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTCH-H
T ss_pred HHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCCH-H
Confidence 666666789999999999998622 367888999999999988888865 33 677777889999999985444 4
Q ss_pred HHHHHHHhcCeEeeC-CCCCC--C-CCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024 224 VFAEILEKTHITTVP-GSGFG--P-GGEEYIRISGF-GHRESILEASRRLEAL 271 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~-g~~~~--~-~~~~~~R~s~~-~~~~~i~~~l~~l~~~ 271 (272)
.+.++++++||.+.| |..|. . .+.+++|+|+. .+++++++++++|+++
T Consensus 362 ~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~ 414 (422)
T 3d6k_A 362 RVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATC 414 (422)
T ss_dssp HHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Confidence 445566777999999 55564 1 24689999997 5999999999999875
No 50
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=1.9e-34 Score=246.54 Aligned_cols=249 Identities=18% Similarity=0.249 Sum_probs=202.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..+.+. +...++..| +++.+|.+++.++.+| +++ .++++++++++||||||.+++.+++.+|++.|++ |
T Consensus 109 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~-~ 187 (363)
T 3ffh_A 109 TNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPS-D 187 (363)
T ss_dssp CEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT-T
T ss_pred CEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC-C
Confidence 56777666555 778888889 9999999864333333 222 2689999999999999999999999999988877 9
Q ss_pred CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA 158 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (272)
+++|+||+|.++.+ +...+........+++++++|+||.+|++|+|+||+++++++ .+.+..... ..+.
T Consensus 188 ~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~--~~~~ 256 (363)
T 3ffh_A 188 VLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI--------IRQLNIVRP--PFNT 256 (363)
T ss_dssp SEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHH--------HHHHHHTCC--SCCC
T ss_pred cEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHH--------HHHHHHhCC--CCCC
Confidence 99999999998877 444444444445678999999999999999999999998877 566655544 4458
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-LGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV 237 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~ 237 (272)
+.+.+.++.+++.. .+++++.+++++++++++.+.|++ .|+++.++ .+.|+|+.++. +..++...|.++ ||.+.
T Consensus 257 ~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~~-~~~~~~~~l~~~-gi~v~ 331 (363)
T 3ffh_A 257 TSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPA-NGNFVLIDLGI-EAGTIFSYLEKN-GYITR 331 (363)
T ss_dssp BHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC-CSSEEEEECSS-CHHHHHHHHHHT-TEECE
T ss_pred CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCC-CCeEEEEECCC-CHHHHHHHHHHC-CeEEE
Confidence 89999999999874 367899999999999999999999 69998765 67889999986 566777777655 99999
Q ss_pred CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+|+.|+. ++++|+++. +++++++++++|++++
T Consensus 332 ~g~~~~~--~~~iRis~~-~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 332 SGAALGF--PTAVRITIG-KEEDNSAVIALLEKLL 363 (363)
T ss_dssp ETTTTTC--TTEEEEECC-CHHHHHHHHHHHHHHC
T ss_pred eCccCCC--CCeEEEECC-CHHHHHHHHHHHHHhC
Confidence 9998875 689999986 8999999999999875
No 51
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=6.7e-35 Score=251.77 Aligned_cols=257 Identities=16% Similarity=0.238 Sum_probs=204.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCC-CcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGN-NFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~-~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|.+. +...++..| +++.+|+++++ +|.+|++.+ ++++++++++||||||.+++.+++++|+++|
T Consensus 112 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 191 (390)
T 1d2f_A 112 EGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLC 191 (390)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHH
T ss_pred CEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHH
Confidence 56777766555 777888888 99999987653 455664431 3789999999999999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCCC-CCCccccCCCC-CceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhh
Q 036024 75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAR-EVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRII 151 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~-~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~ 151 (272)
+++|+++|+||+|.++.+++. ..++..+.... + . ++|+||.+|++|+|+||+++++ ++ .+.+....
T Consensus 192 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d--~-~~s~sK~~~~~G~r~G~~~~~~~~~--------~~~~~~~~ 260 (390)
T 1d2f_A 192 ERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWA--L-LTSGSKSFNIPALTGAYGIIENSSS--------RDAYLSAL 260 (390)
T ss_dssp HHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEE--E-EECSHHHHTCGGGCCEEEEECSHHH--------HHHHHHHH
T ss_pred HHcCCEEEEEccccccccCCCCCcCHHHcchhhHh--h-ccCccHhhcccChhheEEEECCHHH--------HHHHHHHH
Confidence 999999999999999887653 33444443211 3 3 9999999999999999999864 45 55555544
Q ss_pred h-hcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecCC--CChHHHH
Q 036024 152 C-TCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFPG--RKSWDVF 225 (272)
Q Consensus 152 ~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~~--~~~~~~~ 225 (272)
. ... .+.+.+++.++.+++.. ..+++++.+++++++++.+.+.|++ + |+.+..+.+++++|+.++. .+..++.
T Consensus 261 ~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 339 (390)
T 1d2f_A 261 KGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ 339 (390)
T ss_dssp HTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHH
T ss_pred hhhcccCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHH
Confidence 4 233 35788888888888873 3567889999999999999999998 5 8888887778888999974 4667777
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
..|++++||.+.||+.|++.+++++|+++..+++++++++++|++++
T Consensus 340 ~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l 386 (390)
T 1d2f_A 340 KALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAI 386 (390)
T ss_dssp HHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 77776679999999998755578999999888899999999998763
No 52
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=8.5e-34 Score=242.75 Aligned_cols=250 Identities=17% Similarity=0.244 Sum_probs=198.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.++++++.+ ++. .++++++++++||||||.+++.+++++|+++|++
T Consensus 99 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 177 (364)
T 1lc5_A 99 RRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKS 177 (364)
T ss_dssp SEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhh
Confidence 56777766555 888888889 999999986446654 332 2678999999999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEE-ecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+|+++|+||+|.++.+++ .+.....+..+++++++|+||.+|++|+|+||++ +++++ .+.+..... .
T Consensus 178 ~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--------~~~l~~~~~--~ 245 (364)
T 1lc5_A 178 LNINLILDEAFIDFIPHE--TGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAA--------MARMRRQQM--P 245 (364)
T ss_dssp HTCEEEEECTTGGGSTTC--CCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHH--------HHHHHHHSC--T
T ss_pred cCcEEEEECcChhhccCc--cchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHH--------HHHHHHhCC--C
Confidence 999999999999877652 2223332334678999999999999999999999 77776 555554433 3
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI 234 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi 234 (272)
.+.+.+++.++.++++. .+++++.+++++++++++.+.|+++ |+.+.+ ..++|+|+.++. ...++...|.++ ||
T Consensus 246 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~g~~~~~~~~~-~~~~l~~~l~~~-gi 320 (364)
T 1lc5_A 246 WSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYP-GRANYLLLRCER-EDIDLQRRLLTQ-RI 320 (364)
T ss_dssp TCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECC-CSSSEEEEEESC-TTCCHHHHHHTT-TE
T ss_pred CCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECC-CCCeEEEEECCC-cHHHHHHHHHHC-Cc
Confidence 45888999999999985 4678899999999999999999988 888775 467888998874 234566777655 99
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.+.||+.|+..+.+++|+++. ++++++++++.|++++
T Consensus 321 ~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 357 (364)
T 1lc5_A 321 LIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNVL 357 (364)
T ss_dssp ECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC
T ss_pred EEeeCcccCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence 999999987555789999975 5778888888887653
No 53
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4.7e-35 Score=255.65 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=206.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC-C---------CCceEEE-EecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T---------SRTDIIF-FCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~---------~~~~~i~-~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..|.+. +...++..| +++.+|.+++ ++.+| +++ + +++++|+ +++||||||.+++.+++++
T Consensus 134 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~ 212 (425)
T 1vp4_A 134 SYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKA 212 (425)
T ss_dssp CEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHH
Confidence 56777766655 778888888 9999998765 43333 222 1 2688885 6799999999999999999
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~ 148 (272)
|+++|+++|+++|+||+|.++.+++.. .++..+. ..+++++++|+||.+| +|+|+||+++++++ ++.+.
T Consensus 213 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~--------~~~l~ 282 (425)
T 1vp4_A 213 LVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG-GPERVVLLNTFSKVLA-PGLRIGMVAGSKEF--------IRKIV 282 (425)
T ss_dssp HHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH-CTTTEEEEEESTTTTC-GGGCEEEEECCHHH--------HHHHH
T ss_pred HHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhC-CCCCEEEEeccccccc-cccceEEEeeCHHH--------HHHHH
Confidence 999999999999999999998876543 4555543 2457899999999999 99999999999877 56666
Q ss_pred hhhhhccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEecCCCceEEEeecC-CCCh
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASL-----GIKVYGGINAPYVWAHFP-GRKS 221 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~i~l~-~~~~ 221 (272)
........+.+.++|.++.++++... .+++++.+++++++++.+.+.|++. |+.+..+.+++++|+.++ +.+.
T Consensus 283 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 362 (425)
T 1vp4_A 283 QAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDT 362 (425)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCT
T ss_pred HHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCCH
Confidence 55555445578899999999998543 3678889999999999999999875 688887778999999998 3455
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCC--CCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 222 WDVFAEILEKTHITTVPGSGFGPG--GEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 222 ~~~~~~ll~~~gi~v~~g~~~~~~--~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
.++...|+++ ||.+.||+.|+.. +.+++|+++.. +++++++++++|++++
T Consensus 363 ~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l 415 (425)
T 1vp4_A 363 WEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVV 415 (425)
T ss_dssp TTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 6778888877 9999999988643 46899999865 7999999999998753
No 54
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=2.3e-34 Score=245.18 Aligned_cols=249 Identities=19% Similarity=0.223 Sum_probs=200.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.+++.++.++ +++ .++++++++++||||||.+++.+++++|+++| +
T Consensus 93 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~ 171 (354)
T 3ly1_A 93 AQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASK-P 171 (354)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTC-C
T ss_pred CeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-C
Confidence 56777776666 778888889 9999999865344333 222 16899999999999999999999999999999 8
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCC-CceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAR-EVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
+|+++|+||+|.++.+++...+........ +++++++|+||.+|++|+|+||+++++++ .+.+......
T Consensus 172 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~~-- 241 (354)
T 3ly1_A 172 ANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTV--------IALMGRYVAG-- 241 (354)
T ss_dssp TTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHH--------HHHHGGGTTC--
T ss_pred CCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHH--------HHHHHHhcCC--
Confidence 999999999999888776544444432223 77899999999999999999999998877 5666655544
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT 235 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~ 235 (272)
.+.+.+.+.++.+++... +++++.+++++++++++.+.|+++|+.+.++ .++|+|+.++. +..++...|.+ +||.
T Consensus 242 ~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~l~~-~gi~ 316 (354)
T 3ly1_A 242 EKINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPYLPS-EGNFVFHQLVV-PLKDYQTHMAD-AGVL 316 (354)
T ss_dssp SCCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-CSSEEEEECSS-CHHHHHHHHHH-TTEE
T ss_pred CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCeECCC-CceEEEEECCC-CHHHHHHHHHH-CCEE
Confidence 468899999999998843 7789999999999999999999888888754 67889999986 56666666665 5999
Q ss_pred eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+. |..++ ..+++|+++. +++++++++++|++++
T Consensus 317 v~-g~~~~--~~~~iRis~~-~~~~i~~~~~~l~~~l 349 (354)
T 3ly1_A 317 IG-RAFPP--ADNWCRISLG-TPQEMQWVADTMREFR 349 (354)
T ss_dssp CC-CCCTT--CTTEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred Ee-ecCCC--CCCEEEEEcC-CHHHHHHHHHHHHHHH
Confidence 98 76543 4789999985 7899999999998763
No 55
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=9.6e-35 Score=251.41 Aligned_cols=258 Identities=21% Similarity=0.276 Sum_probs=205.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCC---CCceEEE-EecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT---SRTDIIF-FCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~---~~~~~i~-~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|.+++ ++.++ +++. +++++++ +++||||||.+++.+++++|+++|++
T Consensus 116 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~ 194 (397)
T 2zyj_A 116 SPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVME 194 (397)
T ss_dssp CEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHH
Confidence 56777666555 777888888 9999998764 43332 2221 3788875 57999999999999999999999999
Q ss_pred cCCEEEEcccCCccccCCC-CCCccccCCC--CCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGA--REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|+++|+||+|.++.+++. ..++..+... .+++++++|+||.+| +|+|+||+++++++ .+.+......
T Consensus 195 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~--------~~~l~~~~~~ 265 (397)
T 2zyj_A 195 RGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEA--------LQKLVQAKQG 265 (397)
T ss_dssp HTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHH--------HHHHHHHHHH
T ss_pred cCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHH--------HHHHHHHHHh
Confidence 9999999999999887654 3455555311 157899999999999 99999999999777 5666655544
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---CCeEecCCCceEEEeecC-CCChHHHHHHHH
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---GIKVYGGINAPYVWAHFP-GRKSWDVFAEIL 229 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll 229 (272)
...+++.++|.++.++++....+++++.+++++++++.+.+.|++. |+.+..+.+++++|+.++ +.+..++...|.
T Consensus 266 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 345 (397)
T 2zyj_A 266 ADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRAL 345 (397)
T ss_dssp HHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHH
Confidence 4455788999999999885423678899999999999999999875 788877778999999997 445667777777
Q ss_pred HhcCeEeeCCCCCCCC--CCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 230 EKTHITTVPGSGFGPG--GEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~--~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
++ ||.+.||..|+.. +++++|+++.. +++++++++++|++++
T Consensus 346 ~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l 390 (397)
T 2zyj_A 346 EE-NVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRAL 390 (397)
T ss_dssp HT-TEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred HC-CCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 77 9999999988743 46899999865 7999999999998753
No 56
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=4.7e-35 Score=254.35 Aligned_cols=252 Identities=15% Similarity=0.089 Sum_probs=196.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-------C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-------S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-------~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|.+. |...++..| +++++|+..+.++.+|++.+ + +++++++++||||||.+++.+++++|+++
T Consensus 132 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~ 211 (409)
T 4eu1_A 132 NRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDV 211 (409)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHH
Confidence 67888777776 888888899 99999986555677775432 2 44566668999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEE--EecccccccCCcchHHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT--VVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~--~~~~~~~~~~~~~~~~~~~ 148 (272)
|+++|+++|+||+|.++.+++. ..++..+.+..+++++++|+||++|++|+|+||+ +++++.. ...+.+.+.
T Consensus 212 ~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~---~~~l~~~~~ 288 (409)
T 4eu1_A 212 IKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEE---AKRLVSQLA 288 (409)
T ss_dssp HHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHH---HHHHHHHHH
T ss_pred HHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHH---HHHHHHHHH
Confidence 9999999999999999887752 2344444334567899999999999999999997 5554320 001145555
Q ss_pred hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCC
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGR 219 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~ 219 (272)
........+++.+.|.++.+++.+.. .++.++++++++++++++.+.|+++| +.+..+++++++|+.++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-- 366 (409)
T 4eu1_A 289 LLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLT-- 366 (409)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCC--
T ss_pred HHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCC--
Confidence 55555556678899999998888542 35678899999999999999999987 77777889999997664
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
.+++.++++++||.+.|| .|++++ .+++++++++++|++++
T Consensus 367 --~~~~~~ll~~~gv~v~p~----------~Ri~~~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 367 --REQVELLRSEYHIYMTLN----------GRAAVSGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp --HHHHHHHHHHHCEECCTT----------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred --HHHHHHHHHcCCEEEcCC----------CEEEEEecCHhhHHHHHHHHHHHh
Confidence 366788888889999874 388875 47778999999998763
No 57
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.3e-34 Score=247.70 Aligned_cols=248 Identities=18% Similarity=0.282 Sum_probs=200.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..|.+. +...++..| +++.+|++ +.++ +|++. .++++++++++||||||.+++.+++.+|+++| +
T Consensus 107 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~ 183 (365)
T 3get_A 107 NAFLQAGVTFAMYEIYAKQCGAKCYKTQSI-THNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGV-N 183 (365)
T ss_dssp CEEEECSSCCTHHHHHHHHHTCEEEECSSS-SCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTS-C
T ss_pred CEEEEeCCChHHHHHHHHHcCCEEEEEecC-CCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-C
Confidence 56777776666 777888888 99999983 3355 66443 27899999999999999999999999999998 5
Q ss_pred cCCEEEEcccCCcccc--C-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYVT--D-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~--~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|+++|+||+|.++.+ . +.+.+.....+..+++++++|+||.+|++|+|+||+++++++ .+.+......
T Consensus 184 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~~~ 255 (365)
T 3get_A 184 EDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANI--------ISAFYKLRAP 255 (365)
T ss_dssp TTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHH--------HHHHHHHSCT
T ss_pred CCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHH--------HHHHHHhcCC
Confidence 7999999999998874 3 333344333233467899999999999999999999998777 5566554443
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcC
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTH 233 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~g 233 (272)
.+.+.+.+.++.+++.. .+++++.+++++++++++.+.|+++|+++.++ .+.|+|+.++..+..++...|.++ |
T Consensus 256 --~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-g 329 (365)
T 3get_A 256 --FNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKHNIKIIDS-YTNFITYFFDEKNSTDLSEKLLKK-G 329 (365)
T ss_dssp --TCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC-SSSEEEEECSSSCHHHHHHHHHTT-T
T ss_pred --CCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEECCC-CCeEEEEECCCCCHHHHHHHHHHC-C
Confidence 34888999999999884 37789999999999999999999999988765 677899999865566666666655 9
Q ss_pred eEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 234 ITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 234 i~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|.+.||+.|+ .+++|+++. +++++++++++|++++
T Consensus 330 i~v~~g~~~~---~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 330 IIIRNLKSYG---LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp EECEECGGGT---CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred EEEEECccCC---CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 9999999887 689999986 8999999999998764
No 58
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=2.2e-34 Score=251.19 Aligned_cols=258 Identities=15% Similarity=0.161 Sum_probs=203.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEe-cCCCccccCCCHHHHHHHHHHH-
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFA- 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~- 74 (272)
|.|++..|.+. |...++..| +++++|++.+ ++.+| +++ .+++++++++ +||||||.+++.+++++|+++|
T Consensus 125 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~ 203 (423)
T 3ez1_A 125 PKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQA 203 (423)
T ss_dssp CEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCC
T ss_pred CEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC-CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 77888877766 778888899 9999999865 44443 222 3688999876 8999999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCC-C---CCCcccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH
Q 036024 75 RNNGSIIIFDSAYAAYVTDG-C---PRSIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF 147 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~-~---~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~ 147 (272)
+++|+++|+||+|..+.+.+ . ..++..+ .+..+++++++|+||.+ ++|+|+||+++++++ ++.+
T Consensus 204 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~G~r~G~~~~~~~~--------~~~~ 274 (423)
T 3ez1_A 204 AAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKIT-FAGAGLGFVASSEDN--------IRWL 274 (423)
T ss_dssp SSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTS-CSSSSCEEEEECHHH--------HHHH
T ss_pred hccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhc-cCCcceEEEEeCHHH--------HHHH
Confidence 99999999999999654443 2 2233332 13467899999999994 699999999999887 6777
Q ss_pred HhhhhhccCCcchHHHHHHHHhccc--cc-HHHHHHHHHHHHHHHHHHHHHHHh----CC--CeEecCCCceEEEeecCC
Q 036024 148 NRIICTCFNGASNIAQAGGLACLSS--EG-LEAVHSVVDYYKENTKILIDTLAS----LG--IKVYGGINAPYVWAHFPG 218 (272)
Q Consensus 148 ~~~~~~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~~~l~~~L~~----~g--~~~~~~~~~~~~~i~l~~ 218 (272)
.........+++.+.|.++.+++.+ .. .+++++.++.++++++.+.+.|.+ +| +.+..+++++|+|+.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (423)
T 3ez1_A 275 SKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAE 354 (423)
T ss_dssp HHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESS
T ss_pred HHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCC
Confidence 7777777777999999999999886 32 267788888888888888777765 45 777788889999999986
Q ss_pred CChHHHHHHHHHhcCeEeeC-CCCCCC---CCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 219 RKSWDVFAEILEKTHITTVP-GSGFGP---GGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~-g~~~~~---~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
.+. +.+.++++++||.+.| |+.|+. .+++++|+++.. +++++++++++|++++
T Consensus 355 ~~~-~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l 412 (423)
T 3ez1_A 355 PVA-DRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACI 412 (423)
T ss_dssp SCH-HHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHH
T ss_pred CcH-HHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 544 4455556677999999 666653 357899999865 8999999999998763
No 59
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=8.6e-34 Score=246.09 Aligned_cols=257 Identities=21% Similarity=0.270 Sum_probs=204.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--------CCCceEEE-EecCCCccccCCCHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--------TSRTDIIF-FCSPNNPTGHAATQNQLEQLV 71 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--------~~~~~~i~-~~~p~nptG~~~~~~~l~~l~ 71 (272)
|.|++..|.+. +...++..| +++.+|.+++ ++.++ +++ .+++++|+ +++|+||||.+++.+++++|+
T Consensus 123 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~ 201 (407)
T 2zc0_A 123 DVVITENPSYINTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALL 201 (407)
T ss_dssp CEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHcCCEEEEcccCCC-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHH
Confidence 56777766655 777778888 9999998764 43333 221 13788875 569999999999999999999
Q ss_pred HHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 72 EFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 72 ~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
++|+++|+++|+||+|..+.+++. ..++..+. ..+++++++|+||.+| +|+|+||+++++++ .+.+...
T Consensus 202 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~--------~~~~~~~ 271 (407)
T 2zc0_A 202 EIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD-NEGRVIVAGTLSKVLG-TGFRIGWIIAEGEI--------LKKVLMQ 271 (407)
T ss_dssp HHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC-SSCCEEEEEESTTTTC-TTSCCEEEECCHHH--------HHHHHHH
T ss_pred HHHHHcCCEEEEECCCcccccCCCCCCChhhcC-CCCCEEEEcccccccC-CCcceEEEecCHHH--------HHHHHHH
Confidence 999999999999999998877654 24455553 2357899999999999 99999999998776 5666665
Q ss_pred hhhccCCcchHHHHHHHHhccccc-H-HHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecC-CCChHHHH
Q 036024 151 ICTCFNGASNIAQAGGLACLSSEG-L-EAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFP-GRKSWDVF 225 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~-~~~~~~~~ 225 (272)
......+++.+.|.++.++++... . +++++.+++++++++++.+.|++. ++.+..+.+++++|+.++ +.+..++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 351 (407)
T 2zc0_A 272 KQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGISFA 351 (407)
T ss_dssp HTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCCHHHHH
T ss_pred HHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCCHHHHH
Confidence 555555678899999998887532 2 467788999999999999999874 688777778899999997 45667778
Q ss_pred HHHHHhcCeEeeCCCCCCCC--CCCeEEEEccC-CHHHHHHHHHHHHHh
Q 036024 226 AEILEKTHITTVPGSGFGPG--GEEYIRISGFG-HRESILEASRRLEAL 271 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~~--~~~~~R~s~~~-~~~~i~~~l~~l~~~ 271 (272)
..|++++||.+.||+.|+.. +.+++|+++.. +++++++++++|+++
T Consensus 352 ~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~ 400 (407)
T 2zc0_A 352 NELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKL 400 (407)
T ss_dssp HHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 88877779999999988753 46899999865 789999999999875
No 60
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=2.6e-34 Score=248.93 Aligned_cols=251 Identities=14% Similarity=0.114 Sum_probs=193.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCC-------C-CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLK-------G-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~-------~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|.+. |...++..| +++++|++.+.++.+|++ + .++++++++++||||||.+++.+++++|+++
T Consensus 124 d~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~ 203 (401)
T 7aat_A 124 RDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASV 203 (401)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 66777777666 888888899 999999865445555543 2 2577899999999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEEEec---ccccccCCcchHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP---EELLFSSGFPVINDF 147 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~---~~~~~~~~~~~~~~~ 147 (272)
|+++|+++|+||+|.++.+++. ..++..+....+++++++|+||.+|++|+|+||++++ ++.. ..+...+
T Consensus 204 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~----~~~~~~~ 279 (401)
T 7aat_A 204 VKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEA----KRVESQL 279 (401)
T ss_dssp HHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHH----HHHHHHH
T ss_pred HHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHH----HHHHHHH
Confidence 9999999999999999887652 2223333234577899999999999999999998873 2210 1124555
Q ss_pred HhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCC
Q 036024 148 NRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPG 218 (272)
Q Consensus 148 ~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~ 218 (272)
..........++..+|.++..++.+.. .+++++++++++++++++.+.|+++| +.+..+++++++|+.++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~- 358 (401)
T 7aat_A 280 KILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK- 358 (401)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC-
T ss_pred HHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC-
Confidence 555555555677788888877776432 35678899999999999999999875 67777888999998774
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
.+.+..+++++||.+.|+ +|++++ .+++++++++++|++++
T Consensus 359 ---~~~~~~ll~~~gi~v~~~----------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 359 ---PEQVERLTKEFSIYMTKD----------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp ---HHHHHHHHHHHCEECCTT----------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhCCEeccCC----------CeEEeccCChhhHHHHHHHHHHHh
Confidence 456678888889999653 699985 36667999999998763
No 61
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=7.9e-34 Score=247.24 Aligned_cols=250 Identities=15% Similarity=0.164 Sum_probs=194.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC---------CCce-EEEEecC-CCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT---------SRTD-IIFFCSP-NNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~---------~~~~-~i~~~~p-~nptG~~~~~~~l~~l 70 (272)
|.|++..|.+. |...+...| +++++|+++++ +.+|++.+ ++++ ++++++| |||||.+++.+++++|
T Consensus 127 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l 205 (418)
T 3rq1_A 127 DEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSI 205 (418)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred CEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 66777777766 888888899 99999996553 55564431 1566 7788899 9999999999999999
Q ss_pred HHHHH------HcCCEEEEcccCCccccCCCC-CCc-cccCCCCCc--eEEEecCccccCCCccceeEEEe---cccccc
Q 036024 71 VEFAR------NNGSIIIFDSAYAAYVTDGCP-RSI-YEIPGAREV--AIEISSFSKFSGFTGVRLGWTVV---PEELLF 137 (272)
Q Consensus 71 ~~~~~------~~~~~vi~D~~~~~~~~~~~~-~~~-~~~~~~~~~--~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~ 137 (272)
+++|+ ++++++|+||+|.++.+.+.. .++ ....+..++ +++++|+||.+|++|+|+||+++ ++++
T Consensus 206 ~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~-- 283 (418)
T 3rq1_A 206 LNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEI-- 283 (418)
T ss_dssp HHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHH--
T ss_pred HHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHH--
Confidence 99999 899999999999988766431 222 223333444 58999999999999999999998 6666
Q ss_pred cCCcchHHHHHhhhhh----ccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC
Q 036024 138 SSGFPVINDFNRIICT----CFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN 208 (272)
Q Consensus 138 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 208 (272)
++.+...... .+..++.++|.++.+++.+.. .++.++++++++++++.+.+.|+++|+++..+++
T Consensus 284 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 357 (418)
T 3rq1_A 284 ------ADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRG 357 (418)
T ss_dssp ------HHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCS
T ss_pred ------HHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence 4555443322 234578899999999888542 2455677889999999999999988999988888
Q ss_pred ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 209 APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 209 ~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
++|+|+.++ +..++.. .++++||.+.||. +++|++++ .+++++++++++|++++
T Consensus 358 ~~~~~~~~~--~~~~~~~-~l~~~gi~v~~g~-------~~iRis~~~~~~~~i~~~~~~l~~~l 412 (418)
T 3rq1_A 358 GFFITIPTD--SANAICE-ELKKEHIYVIALA-------NGIRIAACGIPKCQMTGLAEKIYNAM 412 (418)
T ss_dssp SSEEEEECT--THHHHHH-HHHHTTEECEECS-------SEEEEEGGGSCHHHHTTHHHHHHHHH
T ss_pred eEEEEcCCC--CHHHHHH-HHHhCCEEEecCC-------CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999885 4556665 4566799999973 67999986 49999999999998763
No 62
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=2.7e-33 Score=243.66 Aligned_cols=226 Identities=18% Similarity=0.254 Sum_probs=179.4
Q ss_pred CcccCCCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEE
Q 036024 35 NFFPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIE 111 (272)
Q Consensus 35 ~~~~dl~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~ 111 (272)
++.+|++. .++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+..+...... .....+++++
T Consensus 167 ~~~~d~~~l~~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~~~i~ 244 (417)
T 3g7q_A 167 KYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEA--RPLWNPNIIL 244 (417)
T ss_dssp EEECCGGGCCCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCC--CCCCCTTEEE
T ss_pred ccccCHHHhccccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccccccc--ccCCCCCEEE
Confidence 34455433 367899999999999999999999999999999999999999999863322111111 1123567899
Q ss_pred EecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHH-HHHHHHHHH
Q 036024 112 ISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHS-VVDYYKENT 189 (272)
Q Consensus 112 ~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~-~~~~~~~~~ 189 (272)
++|+|| ++.+|+|+||+++++++ .+.+.........+++.++|.++.+++..... ++..+ +++++++++
T Consensus 245 ~~s~sK-~~~~G~r~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 315 (417)
T 3g7q_A 245 CMSLSK-LGLPGSRCGIIIANDKT--------ITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRV 315 (417)
T ss_dssp EEESGG-GTCTTSCCEEEECCHHH--------HHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHH
T ss_pred EEechh-ccCCCcceEEEEeCHHH--------HHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 999999 57899999999998887 67777777666677889999999999986554 44444 778899999
Q ss_pred HHHHHHHHhC----CCeEecCCCceEEEeecCC--CChHHHHHHHHHhcCeEeeCCCCCCCCC-------CCeEEEEccC
Q 036024 190 KILIDTLASL----GIKVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHITTVPGSGFGPGG-------EEYIRISGFG 256 (272)
Q Consensus 190 ~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~v~~g~~~~~~~-------~~~~R~s~~~ 256 (272)
+.+.+.|.+. |+.+..+++++++|+.++. .+..++...+ .++||.+.||+.|++.. .+++|+|+..
T Consensus 316 ~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~ 394 (417)
T 3g7q_A 316 QQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP 394 (417)
T ss_dssp HHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS
T ss_pred HHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEEEEecC
Confidence 9999888763 5888888889999999984 4666766666 55699999999987543 5799999977
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
+++++++++++|++++
T Consensus 395 ~~~~i~~~~~~l~~~l 410 (417)
T 3g7q_A 395 EPDKIEAGVKILAEEI 410 (417)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998763
No 63
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=3.6e-33 Score=238.99 Aligned_cols=245 Identities=16% Similarity=0.229 Sum_probs=199.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...++..| +++.+|.+++ +.+|++.+ + +++++++++||||||.+++.+++++|+++|+
T Consensus 110 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~ 187 (367)
T 3euc_A 110 AKVMAPVPGFVMYAMSAQFAGLEFVGVPLRAD--FTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQ 187 (367)
T ss_dssp CEEEEEESCSCCSCHHHHTTTCEEEEEECCTT--SCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTB
T ss_pred CEEEEcCCCHHHHHHHHHHcCCeEEEecCCCC--CCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhh
Confidence 56777766655 778888889 9999999864 44453331 3 7999999999999999999999999999999
Q ss_pred Hc--CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 76 NN--GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 76 ~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
++ |+++|+||+|.++...+ .. ... +..+++++++|+||. +++|+|+||+++++++ .+.+.....
T Consensus 188 ~~~~~~~li~De~~~~~~~~~-~~--~~~-~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~--------~~~~~~~~~- 253 (367)
T 3euc_A 188 GSVCRSLVVVDEAYQPFAQES-WM--SRL-TDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQW--------LEQLDKVRP- 253 (367)
T ss_dssp TTSCBCEEEEECTTCCSSSCC-SG--GGG-GTCTTEEEEEECCCT-TSCSCCEEEEEECHHH--------HHHHGGGCC-
T ss_pred hcCCCcEEEEeCcchhhcccc-hH--HHH-hhCCCEEEEecchhh-cccccCceeeeeCHHH--------HHHHHHhCC-
Confidence 99 99999999999866332 11 122 234678999999999 8899999999998877 555554433
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhc
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKT 232 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~ 232 (272)
..+.+.+.+.++.++++. .+++++.+++++++++++.+.|+++ |+.+.+ ..++++|+.++ +..++...| +++
T Consensus 254 -~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~--~~~~l~~~l-~~~ 326 (367)
T 3euc_A 254 -PYNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFP-SAANFLLARVP--DAAQTFDRL-LAR 326 (367)
T ss_dssp -SSCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECC-CSSSEEEEECS--CHHHHHHHH-HTT
T ss_pred -CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCeEEEEECC--CHHHHHHHH-HHC
Confidence 345889999999999985 6678999999999999999999998 898655 57889999998 556666665 556
Q ss_pred CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
||.+.+|+.|+....+++|+++. +++++++++++|++++
T Consensus 327 gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 327 KVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASL 365 (367)
T ss_dssp TEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred CeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHh
Confidence 99999999887667899999986 8999999999999875
No 64
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.9e-33 Score=239.30 Aligned_cols=245 Identities=19% Similarity=0.283 Sum_probs=191.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeec-CCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLEC-GPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~-~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 80 (272)
|.|++..|.+. +...++..| +++.+|. ++++++.+ ++++++++++||||||.+++.+++++|++.|+++ +
T Consensus 90 d~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~--~ 162 (350)
T 3fkd_A 90 SRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF-----SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDT--T 162 (350)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC-----TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTS--E
T ss_pred CEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc-----CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCC--E
Confidence 66777777666 778888889 9999999 65445544 6899999999999999999999999988888655 9
Q ss_pred EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcch
Q 036024 81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160 (272)
Q Consensus 81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (272)
+|+||+|.++.+.+... .... ...+++++++|+||.+|++|+|+||+++++++ .+.+..... ..+.+.
T Consensus 163 li~Dea~~~~~~~~~~~-~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~~--~~~~~~ 230 (350)
T 3fkd_A 163 FVLDQSYVSFTTEEVIR-PADI-KGRKNLVMVYSFSHAYGIPGLRIGYIVANKDF--------MKRVAAFST--PWAVNA 230 (350)
T ss_dssp EEEECTTTTSCSSCCCC-GGGG-TTCSSEEEEEESHHHHSCGGGCCEEEECCHHH--------HHHHHTTCC--TTCSCH
T ss_pred EEEECchhhhccCcchh-hHHh-hcCCCEEEEecCchhccCcchheEeEEeCHHH--------HHHHHHhCC--CCCCCH
Confidence 99999999887665332 2222 24577899999999999999999999997777 566655543 345888
Q ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG 239 (272)
Q Consensus 161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g 239 (272)
+.+.++.++++... .+.++.++.. ++++.+.+.|+++ |+.+.++ .+.++|+.++..+..++...|.+++||.+.||
T Consensus 231 ~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g 307 (350)
T 3fkd_A 231 LAIEAAKFILIHPA-QFTLPIRKWQ-RNTVDFITALNRLDGVEVHPS-GTTFFLLRLKKGTAAELKKYMLEEYNMLIRDA 307 (350)
T ss_dssp HHHHHHHHHHHCTT-TTCCCHHHHH-HHHHHHHHHHHHSTTEEECCC-SSSEEEEEESSSCHHHHHHHHHHTTCEECEEC
T ss_pred HHHHHHHHHHhCHH-HHHHHHHHHH-HHHHHHHHHHhcCCCcEECCC-CCcEEEEECCCCCHHHHHHHHHHHCCEEEEeC
Confidence 99999999888543 2223344444 8899999999988 8888664 67888999985567778888877579999999
Q ss_pred CCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 240 SGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 240 ~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+.|+..+.+++|+++. +++++++++++|+++
T Consensus 308 ~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~ 338 (350)
T 3fkd_A 308 SNFRGLDESYVRITTQ-RPAQNQLFIKALETF 338 (350)
T ss_dssp TTSTTCCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHH
Confidence 9998777899999985 666777777766654
No 65
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=3.3e-34 Score=249.87 Aligned_cols=251 Identities=16% Similarity=0.154 Sum_probs=194.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------C-CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|.+. |...++..| +++++|...+.++.+|++. . ++++++++++||||||.+++.+++++|+++
T Consensus 144 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~ 223 (420)
T 4f4e_A 144 AKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEV 223 (420)
T ss_dssp CCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 67788877776 888888899 9999999433356666432 1 567888889999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCCC--CCCccccCCCCCceEEEecCccccCCCccceeEEEe--cc-cccccCCcchHHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGC--PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PE-ELLFSSGFPVINDFN 148 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~-~~~~~~~~~~~~~~~ 148 (272)
|+++|+++|+||+|.++.+++. ..++..+.+..+++++++|+||.+|++|+|+||+++ ++ +.+. ++...+.
T Consensus 224 ~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~----~~~~~~~ 299 (420)
T 4f4e_A 224 VKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAA----RVLSQLK 299 (420)
T ss_dssp HHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHH----HHHHHHH
T ss_pred HHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHH----HHHHHHH
Confidence 9999999999999999888742 234444444567889999999999999999999875 22 3210 1122333
Q ss_pred hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCCC
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPGR 219 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~~ 219 (272)
.........++.++|.++..++.+.. .+++++++++++++++.+.+.|+++ |+.+..+++|+|+|+.++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-- 377 (420)
T 4f4e_A 300 RVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT-- 377 (420)
T ss_dssp HHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC--
T ss_pred HHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC--
Confidence 33334555578889998888887543 4678999999999999999999987 678887889999998874
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
.+.+.++++++||.+.|+ .|++++. +++++++++++|++++
T Consensus 378 --~~~~~~~l~~~gI~v~~~----------~Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 378 --SAQVDRLREEFGIYAVST----------GRICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp --HHHHHHHHHHHCEECCTT----------SEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhCCEEecCC----------CeEEEecCCHHHHHHHHHHHHHHh
Confidence 255677777779999874 2999865 7888999999998863
No 66
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=2.4e-34 Score=248.68 Aligned_cols=251 Identities=15% Similarity=0.149 Sum_probs=193.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------C-CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|.+. |...++..| +++.+|...+.++.+|++. . ++++++++++||||||.+++.+++++|+++
T Consensus 122 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~ 201 (397)
T 3fsl_A 122 SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEI 201 (397)
T ss_dssp CCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHH
T ss_pred CeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence 66777777665 888888899 9999999544456666433 1 567788888999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCC--CCCCccccCCCCCceEEEecCccccCCCccceeEEEecc---cccccCCcchHHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE---ELLFSSGFPVINDFN 148 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~---~~~~~~~~~~~~~~~ 148 (272)
|+++|+++|+||+|.++.+++ ...++..+.+..+++++++|+||.+|++|+|+||++++. +.+. ++...+.
T Consensus 202 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~----~~~~~~~ 277 (397)
T 3fsl_A 202 LKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAG----RVLGQLK 277 (397)
T ss_dssp HHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHH----HHHHHHH
T ss_pred HHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHH----HHHHHHH
Confidence 999999999999999988763 223444444456788999999999999999999997632 2210 0112222
Q ss_pred hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCCC
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPGR 219 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~~ 219 (272)
.........++.++|.++..++.+.. .+++++++++++++++.+.+.|+++ |+.+..+++++|+|+.++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-- 355 (397)
T 3fsl_A 278 ATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS-- 355 (397)
T ss_dssp HHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC--
T ss_pred HHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC--
Confidence 22233455568888988888887542 4678899999999999999999987 688888888999998874
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
.+.+.++++++||.+.||. |+++.. +++++++++++|++++
T Consensus 356 --~~~~~~~l~~~gi~v~~g~----------Ris~~~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 356 --AAQVDRLREEFGVYLIASG----------RMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp --HHHHHHHHHTTCEECCTTC----------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred --HHHHHHHHHhCCEEECCCC----------eEEEEecCHhhHHHHHHHHHhhC
Confidence 2456777788899998863 999865 7888999999999875
No 67
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=4.3e-34 Score=246.98 Aligned_cols=238 Identities=18% Similarity=0.209 Sum_probs=185.6
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
.|++..|.+. |...++..| +++.++++.+ ++. .+++|++++++||||||.+++ +|++.++.+++++|
T Consensus 121 ~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~-----~~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii 189 (391)
T 3bwn_A 121 SVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-GFD-----KKGPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVI 189 (391)
T ss_dssp EEEECSSCCTHHHHHHHTTCBTTEEEEEEST-TCC-----CCSCEEEEEESSCTTTCCCCC-----CCC-----CCCEEE
T ss_pred eEEEcCCCchhHHHHHHHcCCeEEEecCCHH-HcC-----CCCCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEE
Confidence 7888887777 888888889 9999998764 444 257899999999999999996 35542222339999
Q ss_pred EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe-cccccccCCcchHHHHHhhhhhccCCcchH
Q 036024 83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV-PEELLFSSGFPVINDFNRIICTCFNGASNI 161 (272)
Q Consensus 83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (272)
+||+|.+ +...++.. ..+++++++||||.+|++|+|+||+++ ++++ ++.+.........+++.+
T Consensus 190 ~De~y~~----~~~~~l~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l--------~~~l~~~~~~~~~~~~~~ 254 (391)
T 3bwn_A 190 HDFAYYW----PHYTPITR---RQDHDIMLFTFSKITGHAGSRIGWALVKDKEV--------AKKMVEYIIVNSIGVSKE 254 (391)
T ss_dssp EECTTCS----TTTSCCCC---CBCCSEEEEEHHHHHSCGGGCEEEEEECCHHH--------HHHHHHHHHHHHSSCCHH
T ss_pred EeCCCCC----CCCCcccc---CCCCeEEEEechhhcCCCccceEEEEecCHHH--------HHHHHHHhcccccCCCHH
Confidence 9999984 21223322 356789999999999999999999997 6666 666766665545668999
Q ss_pred HHHHHHHhccccc---------HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC-------------CCceEEEeecCC
Q 036024 162 AQAGGLACLSSEG---------LEAVHSVVDYYKENTKILIDTLASL-GIKVYGG-------------INAPYVWAHFPG 218 (272)
Q Consensus 162 ~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-------------~~~~~~~i~l~~ 218 (272)
+|.++.+++.+.. .++++++++.++++++.+.+.|+++ |+++..+ ++|+|+|+.++.
T Consensus 255 ~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~ 334 (391)
T 3bwn_A 255 SQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE 334 (391)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS
T ss_pred HHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc
Confidence 9999999998542 4678999999999999999999988 6666543 345689999974
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
. +.+.++++++||.+.||+.|+. +++++|+|++.+++++++++++|++++
T Consensus 335 ~---~~~~~~l~~~gV~v~pg~~fg~-~~~~iRis~~~~~e~i~~~~~~L~~~~ 384 (391)
T 3bwn_A 335 E---TDLVSELRRHKVMSRAGERCGS-DKKHVRVSMLSREDVFNVFLERLANMK 384 (391)
T ss_dssp S---CCHHHHHHHTTEECEEGGGGTC-CTTEEEEESCSCHHHHHHHHHHHHSCC
T ss_pred H---HHHHHHHHHCCEEEccCCCCCC-CCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 2 3456667778999999999975 568999999889999999999998764
No 68
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=5.6e-34 Score=247.72 Aligned_cols=251 Identities=16% Similarity=0.142 Sum_probs=196.9
Q ss_pred cccccccCccc-chHHhcccc-e-eEEeecCCCCCcccCCCCC--------CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-N-IEYLECGPGNNFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~-~~~~~~~~~~~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..|.+. |...+...| + ++.+|.++++++.+|++.+ ++++++++++||||||.+++.+++++|++
T Consensus 131 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~ 210 (412)
T 1ajs_A 131 TPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAS 210 (412)
T ss_dssp SCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHH
T ss_pred CeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHH
Confidence 77888877666 888888888 8 9999986444666664431 36678888999999999999999999999
Q ss_pred HHHHcCCEEEEcccCCccccCC---CCCCccccCCCCCceEEEecCccccCCCccceeEEEe---cccccccCCcchHHH
Q 036024 73 FARNNGSIIIFDSAYAAYVTDG---CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV---PEELLFSSGFPVIND 146 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~~~~~~~~~~ 146 (272)
+|+++|+++|+||+|.++.+++ ...++..+....+++++++|+||.+|.+|+|+||+++ +++... .+.+.
T Consensus 211 ~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~----~~~~~ 286 (412)
T 1ajs_A 211 VMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSIL----RVLSQ 286 (412)
T ss_dssp HHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHH----HHHHH
T ss_pred HHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHH----HHHHH
Confidence 9999999999999999887764 3334444433457789999999999978999999998 665311 11344
Q ss_pred HHhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecC
Q 036024 147 FNRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFP 217 (272)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~ 217 (272)
+......+..+++.++|.++.++++... .+++++.+++++++++++.+.|++++ +.+..+.+++++|+.++
T Consensus 287 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (412)
T 1ajs_A 287 MQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN 366 (412)
T ss_dssp HHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC
T ss_pred HHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC
Confidence 4443334444468899999999888543 35788999999999999999999886 77777788999998764
Q ss_pred CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024 218 GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF 272 (272)
Q Consensus 218 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l 272 (272)
.+.+..+++++||.+.|+ +|+++. .+++++++++++|++++
T Consensus 367 ----~~~~~~~l~~~gv~v~~~----------~Ris~~~~~~~~i~~~~~~l~~~l 408 (412)
T 1ajs_A 367 ----PKQVEYLINQKHIYLLPS----------GRINMCGLTTKNLDYVATSIHEAV 408 (412)
T ss_dssp ----HHHHHHHHHTTCEECCTT----------SEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCEEecCC----------cEEEeeeCCHHHHHHHHHHHHHHH
Confidence 466777888889999763 599987 48999999999998763
No 69
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=2.5e-36 Score=261.00 Aligned_cols=260 Identities=16% Similarity=0.241 Sum_probs=206.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCC-CcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGN-NFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~-~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..|.+. +...+...| +++.+|.++++ +|.+|++.+ ++++++++++||||||.+++.+++++|+++|
T Consensus 114 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~ 193 (392)
T 3b1d_A 114 EAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLC 193 (392)
Confidence 56777666555 777778888 99999986433 355564432 5788999999999999999999999999999
Q ss_pred HHcCCEEEEcccCCccccCCC-CCCccccCCC-CCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHHhhh
Q 036024 75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGA-REVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFNRII 151 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~ 151 (272)
+++|+++|+||+|.++.+++. ..++..+... .+++++++|+||.+|++|+|+||++++++ + ++.+....
T Consensus 194 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--------~~~~~~~~ 265 (392)
T 3b1d_A 194 QKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTL--------CAQFKHQQ 265 (392)
Confidence 999999999999999887653 3344444322 56789999999999999999999999765 5 44454444
Q ss_pred hhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecCC--CChHHHHH
Q 036024 152 CTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFPG--RKSWDVFA 226 (272)
Q Consensus 152 ~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~ 226 (272)
.... .+.+.++|.++.+++.. ..++++++++.++++++.+.+.|++ + ++.+..+++++++|+.++. .+..++..
T Consensus 266 ~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 344 (392)
T 3b1d_A 266 LVNNHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFT 344 (392)
Confidence 3332 34678888888888874 3467889999999999999999987 5 8888888888888999874 35566777
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.|++++||.+.||..|++.+++++|+++..+++++++++++|++++
T Consensus 345 ~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l 390 (392)
T 3b1d_A 345 LLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCL 390 (392)
Confidence 7776679999999999866678999999888899999999998764
No 70
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=5.2e-32 Score=231.30 Aligned_cols=243 Identities=19% Similarity=0.262 Sum_probs=191.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
|.|++..|.+. +...++..| +++.+|.+++..+ .++.+..+++++++++|+||||.+++. ++|.++|+++|+++
T Consensus 107 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~l~~~~~~~~v~i~~p~nptG~~~~~---~~l~~l~~~~~~~l 182 (360)
T 3hdo_A 107 EEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI-AGFPERYEGKVFFLTTPNAPLGPSFPL---EYIDELARRCAGML 182 (360)
T ss_dssp CEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB-TTCCSSBCSSEEEEESSCTTTCCCCCH---HHHHHHHHHBSSEE
T ss_pred CEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH-HHHHhhcCCCEEEEeCCCCCCCCCcCH---HHHHHHHHHCCCEE
Confidence 66777777665 778888889 9999999765444 234444567899999999999999995 55666778899999
Q ss_pred EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024 82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (272)
|+||+|.++... +........+++++++|+||.+|++|+|+||+++++++ .+.+..... ..+.+.+
T Consensus 183 i~De~~~~~~~~----~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~--~~~~~~~ 248 (360)
T 3hdo_A 183 VLDETYAEFAES----NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEV--------IAALDKIRD--HYNLDRL 248 (360)
T ss_dssp EEECTTGGGSSC----CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHH--------HHHHHHHSC--SCCSCHH
T ss_pred EEECChHhhCCc----chhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHH--------HHHHHHhCC--CCCCCHH
Confidence 999999986322 12222223467899999999999999999999998777 566655443 3458899
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG 241 (272)
Q Consensus 162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~ 241 (272)
++.++.++++. .+++++.+++++++++++.+.|+++|+.+.++ .+.++|+.+++.+..++...|.+ +||.+.++..
T Consensus 249 ~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~ 324 (360)
T 3hdo_A 249 AQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGYDVIPS-QGNYLFATPPDRDGKRVYDGLYA-RKVLVRHFSD 324 (360)
T ss_dssp HHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC-SSSEEEEECTTCCHHHHHHHHHH-TTEECBCCCS
T ss_pred HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCC-CccEEEEECCCCCHHHHHHHHHH-CCEEEEECCC
Confidence 99999999884 46778999999999999999999999888764 67889999887667777766654 5999999875
Q ss_pred CCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 242 FGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
+..++++|+++. +++++++++++|+++
T Consensus 325 --~~~~~~iRis~~-~~~e~~~l~~al~~~ 351 (360)
T 3hdo_A 325 --PLLAHGMRISIG-TREEMEQTLAALKEI 351 (360)
T ss_dssp --TTTTTSEEEECC-CHHHHHHHHHHHHHH
T ss_pred --CCCCCEEEEEcC-CHHHHHHHHHHHHHH
Confidence 344689999986 889999999999864
No 71
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=1.5e-33 Score=247.65 Aligned_cols=253 Identities=16% Similarity=0.145 Sum_probs=197.2
Q ss_pred cccccccCccc-chHHhc----ccc-eeEEeecCCCC-CcccCCCCC--------CCceEEEEecCCCccccCCCHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVG----KYC-NIEYLECGPGN-NFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLE 68 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~----~~g-~~~~~~~~~~~-~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~ 68 (272)
|.|++..|.+. +...++ ..| +++.+|....+ ++.+|++.+ ++++++++++||||||.+++.++++
T Consensus 146 d~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~ 225 (448)
T 3meb_A 146 AEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWK 225 (448)
T ss_dssp CCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHH
T ss_pred CEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHH
Confidence 67888887776 778888 888 99999994343 566775442 3467778889999999999999999
Q ss_pred HHHHHHHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEE--Ee--------cccc
Q 036024 69 QLVEFARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT--VV--------PEEL 135 (272)
Q Consensus 69 ~l~~~~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~--~~--------~~~~ 135 (272)
+|+++|+++|+++|+||+|+++.+++. ..++..+....+++++++|+||.+|++|+|+||+ ++ +++.
T Consensus 226 ~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~ 305 (448)
T 3meb_A 226 ELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA 305 (448)
T ss_dssp HHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH
T ss_pred HHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH
Confidence 999999999999999999999887651 2233333223567899999999999999999998 66 4431
Q ss_pred cccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhC---C------C
Q 036024 136 LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASL---G------I 201 (272)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~---g------~ 201 (272)
. ...+.+.+..........++.++|.++..++.+.. .+++++++++++++++.+.+.|+++ + +
T Consensus 306 ~---~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~ 382 (448)
T 3meb_A 306 L---SAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTW 382 (448)
T ss_dssp H---HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCC
T ss_pred H---HHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCccccc
Confidence 0 01125566655556666688899999999988543 1568899999999999999999987 3 5
Q ss_pred eEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 202 KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 202 ~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
.+..+++++|+|+.++ .+++..+++++||++.||+ .|+|++. +++++++++++|++++
T Consensus 383 ~~~~~~~g~~~~~~~~----~~~~~~ll~~~gV~v~~G~---------gRis~a~~~~~~i~~~~~~l~~~l 441 (448)
T 3meb_A 383 DHILTAIGMFTFTGLT----PEHVDYLKEKWSIYLVKAG---------GRMSMCGLTESNCDYVAEAIHDAV 441 (448)
T ss_dssp THHHHCCSSEEECCCC----HHHHHHHHHHHCEEECSGG---------GEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred ceeCCCceEEEecCCC----HHHHHHHHHhCCEEEeCCC---------cEEEEecCCHHHHHHHHHHHHHHH
Confidence 5667788999998874 4778888888899999875 2999866 8888999999998763
No 72
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=1.9e-33 Score=243.63 Aligned_cols=253 Identities=13% Similarity=0.096 Sum_probs=193.7
Q ss_pred cccccccCccc-chHHhcccc-ee-EEeecCCCCCcccCCCC--------CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NI-EYLECGPGNNFFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~-~~~~~~~~~~~~~dl~~--------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..|+|. |...++..| +. ..++......+.+|.+. .++++++++++||||||.+++.+++++|++
T Consensus 138 d~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~ 217 (420)
T 4h51_A 138 TPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIAS 217 (420)
T ss_dssp SCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHH
T ss_pred CEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 67899999998 888899988 64 44555444455555322 356677777899999999999999999999
Q ss_pred HHHHcCCEEEEcccCCccccCCCCC---CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPR---SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
+|+++++++|+|++|.++.+++... .+.......++++++.||||.++++|+|+||++++.+.... ..++..++..
T Consensus 218 ~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~ 296 (420)
T 4h51_A 218 LMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDS 296 (420)
T ss_dssp HHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHH
T ss_pred HHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHH
Confidence 9999999999999999998875321 12222233467899999999999999999999998776321 2223444555
Q ss_pred hhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCC
Q 036024 150 IICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRK 220 (272)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~ 220 (272)
........++..+|.++..++.+.. .++++.++++++++++.+.+.|.++| |.+..++.|+|.|+.+.
T Consensus 297 ~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls--- 373 (420)
T 4h51_A 297 LIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS--- 373 (420)
T ss_dssp HHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC---
T ss_pred hhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC---
Confidence 5566677788999998888887543 25688899999999999999999985 45556778999998764
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
. +.++ +|+++||++.|+. |||++. ++++++++.++|.+++
T Consensus 374 ~-e~v~-~L~e~~Vy~~~~g----------Ris~Agl~~~ni~~~a~aI~~vv 414 (420)
T 4h51_A 374 K-AQCE-YCQNHNIFITVSG----------RANMAGLTHETALMLAQTINDAV 414 (420)
T ss_dssp H-HHHH-HHHHTTEECCTTC----------EEEGGGCCHHHHHHHHHHHHHHH
T ss_pred H-HHHH-HHHhCCEEEcCCC----------EEEeccCCHHHHHHHHHHHHHHH
Confidence 2 4454 5577899997642 999864 8999999999998763
No 73
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.1e-33 Score=244.50 Aligned_cols=251 Identities=14% Similarity=0.176 Sum_probs=191.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------C-CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|.+. |...++..| +++.+|.++++++.+|++. . ++++++++++||||||.+++.+++++|+++
T Consensus 121 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~ 200 (396)
T 2q7w_A 121 KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQL 200 (396)
T ss_dssp CEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 56777776665 888888888 9999998643355556333 1 246778888999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCC--CCCCccccCCCCCceEEEecCccccCCCccceeEEEe---cccccccCCcchHHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV---PEELLFSSGFPVINDFN 148 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~~~~~~~~~~~~ 148 (272)
|+++|+++|+||+|.++.+++ ...++..+....+++++++|+||.+|++|+|+||+++ +++.+. .+.+.+.
T Consensus 201 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~----~~~~~~~ 276 (396)
T 2q7w_A 201 SVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVD----RAFSQMK 276 (396)
T ss_dssp HHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHH----HHHHHHH
T ss_pred HHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHH----HHHHHHH
Confidence 999999999999999887753 2234443432346789999999999999999999987 342210 1144444
Q ss_pred hhhhhccCCcchHHHHHHHHhcccc----c-HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCC
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSE----G-LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGR 219 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~----~-~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~ 219 (272)
........+++.++|.++.++++.. . .+++++.+++++++++.+.+.|++++ +++..+++++++|+.++
T Consensus 277 ~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-- 354 (396)
T 2q7w_A 277 AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT-- 354 (396)
T ss_dssp HHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC--
T ss_pred HHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCC--
Confidence 3333444456889999999888754 1 36778899999999999999999986 77777788999998774
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272 (272)
Q Consensus 220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l 272 (272)
.+.+.++++++||.+.|| +|+++.. +++++++++++|++++
T Consensus 355 --~~~~~~~l~~~gv~v~~~----------~Ris~~~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 355 --KEQVLRLREEFGVYAVAS----------GRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp --HHHHHHHHHHHCEECCTT----------CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred --HHHHHHHHHhcCeeecCC----------ceEEEeecCHHHHHHHHHHHHhcC
Confidence 245667777779999763 6999864 8999999999999875
No 74
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1e-32 Score=239.84 Aligned_cols=239 Identities=19% Similarity=0.296 Sum_probs=185.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C----Cce-EEEEecC-CCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S----RTD-IIFFCSP-NNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~----~~~-~i~~~~p-~nptG~~~~~~~l~~l 70 (272)
|.|++..|++. |...++..| +++.+|+.+++ +.+|++.+ + +++ ++++++| |||||.+++.+++++|
T Consensus 126 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l 204 (413)
T 3t18_A 126 DPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEV 204 (413)
T ss_dssp CEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred CEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 66777777666 888888899 99999986553 55564432 1 677 7777899 9999999999999999
Q ss_pred HHHHH------HcCCEEEEcccCCccccCCCC-CCcc-ccCCCCCc--eEEEecCccccCCCccceeEEEe---cccccc
Q 036024 71 VEFAR------NNGSIIIFDSAYAAYVTDGCP-RSIY-EIPGAREV--AIEISSFSKFSGFTGVRLGWTVV---PEELLF 137 (272)
Q Consensus 71 ~~~~~------~~~~~vi~D~~~~~~~~~~~~-~~~~-~~~~~~~~--~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~ 137 (272)
+++|+ ++|+++|+||+|.++.+.+.. .++. ...+..++ +++++|+||.+|++|+|+||+++ ++++
T Consensus 205 ~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~-- 282 (413)
T 3t18_A 205 ITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEI-- 282 (413)
T ss_dssp HHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHH--
T ss_pred HHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHH--
Confidence 99999 899999999999998877642 2332 33333444 48999999999999999999998 6666
Q ss_pred cCCcchHHHHHhhhhh----ccCCcchHHHHHHHHhccccc----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc
Q 036024 138 SSGFPVINDFNRIICT----CFNGASNIAQAGGLACLSSEG----LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA 209 (272)
Q Consensus 138 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 209 (272)
++.+...... .+..++.++|.++.+++.+.. .++.+++++.++++++.+.+.|+++|+++..++++
T Consensus 283 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 356 (413)
T 3t18_A 283 ------IEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENKLTMIPYFGG 356 (413)
T ss_dssp ------HHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSS
T ss_pred ------HHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCce
Confidence 4555444322 234478899999998887543 25667888999999999999999999999888889
Q ss_pred eEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHH
Q 036024 210 PYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESI 261 (272)
Q Consensus 210 ~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i 261 (272)
+++|+.+. +..++...| +++||.+.|| .+++|+++.. +++++
T Consensus 357 ~~~~~~~~--~~~~~~~~l-~~~gv~v~~g-------~~~iRis~~~~~~~~~ 399 (413)
T 3t18_A 357 FFTFIPTD--KAFDIVKDL-EKENIFTIPS-------AKGIRVAICGVGEEKI 399 (413)
T ss_dssp SCEEEECS--CHHHHHHHH-HHTTEECEEC-------SSEEEECTTTSCGGGH
T ss_pred EEEEeCCC--CHHHHHHHH-HhCCEEEecC-------CCceEEEEeeCCHHHH
Confidence 99998874 556666655 6669999997 4689999864 55554
No 75
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=2.9e-32 Score=230.70 Aligned_cols=236 Identities=19% Similarity=0.242 Sum_probs=184.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
|.|++. |.+. +...++..| +++.+|.++ ++.+|++.+++++++++++||||||.+++.+++++|+++| + ++
T Consensus 98 d~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~---~-~l 170 (335)
T 1uu1_A 98 RSVFFP-PTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTG---A-FV 170 (335)
T ss_dssp EEEECS-SSCHHHHHHHHHHTCEEEECCCCT--TSCCCCCCCCTTEEEEEESSCTTTCCCCCHHHHHHHHHTT---C-EE
T ss_pred CcEEEC-CCcHHHHHHHHHcCCeEEEeccCC--CCCCCHHHcCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC---C-EE
Confidence 566777 5444 777788888 999998863 4566766667899999999999999999988888888877 7 89
Q ss_pred EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024 82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (272)
|+||+|.++... +.....+..+++++++|+||.+|++|+|+||+++++++ ++.+..... ..+.+.+
T Consensus 171 i~De~~~~~~~~----~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~--~~~~~~~ 236 (335)
T 1uu1_A 171 ALDEAYYEFHGE----SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKF--------IDAYNRVRL--PFNVSYV 236 (335)
T ss_dssp EEECTTHHHHCC----CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHH--------HHHHHHHSC--TTCSCHH
T ss_pred EEECcchhhcch----hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHH--------HHHHHHhcC--CCCcCHH
Confidence 999999976532 22222123467899999999999999999999998777 555554433 2468899
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG 241 (272)
Q Consensus 162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~ 241 (272)
+|.++.++++. .++.++.+++++++++++.+.|+++|+.+.+ .+++|+|+.++..+..++...|.++ ||.+.|
T Consensus 237 ~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~--- 309 (335)
T 1uu1_A 237 SQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITD-SRGNFVFVFMEKEEKERLLEHLRTK-NVAVRS--- 309 (335)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC-CCSSEEEEECCTHHHHHHHHHHHHH-TEEEEE---
T ss_pred HHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCcEEcC-CCCeEEEEECCCCCHHHHHHHHHHC-CEEEEE---
Confidence 99999999875 3567889999999999999999988887654 4688999999753345666666655 999988
Q ss_pred CCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 242 FGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
..+++|+++. +++++++++++|++++
T Consensus 310 ----~~~~iRis~~-~~~~i~~~~~~l~~~~ 335 (335)
T 1uu1_A 310 ----FREGVRITIG-KREENDMILRELEVFK 335 (335)
T ss_dssp ----ETTEEEEECC-CHHHHHHHHHHHHCC-
T ss_pred ----CCCeEEEEeC-CHHHHHHHHHHHHhhC
Confidence 2478999984 5688999999998764
No 76
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=3.6e-32 Score=238.52 Aligned_cols=242 Identities=18% Similarity=0.303 Sum_probs=186.3
Q ss_pred hcccc-eeEEeecCCCCC---cccC---CCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 036024 19 VGKYC-NIEYLECGPGNN---FFPD---LKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 19 ~~~~g-~~~~~~~~~~~~---~~~d---l~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~ 86 (272)
+...| .+++++.+.+++ +.+| +++ .++++++++++||||||.+++.+++++|+++|+++|+++|+||+
T Consensus 168 ~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~ 247 (444)
T 3if2_A 168 FAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNA 247 (444)
T ss_dssp EEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred hhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 45567 888888875322 4455 332 36789999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHH
Q 036024 87 YAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGG 166 (272)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 166 (272)
|+.+.......... ....+++++++|+||. +++|+|+||+++++++ .+.+.........+++.+.|.++
T Consensus 248 ~~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l--------~~~~~~~~~~~~~~~~~~~~~a~ 316 (444)
T 3if2_A 248 YGMPFPNIIYSDAH--LNWDNNTILCFSLSKI-GLPGMRTGIIVADAKV--------IEAVSAMNAVVNLAPTRFGAAIA 316 (444)
T ss_dssp TCTTTTCCBCSCCC--CCCCTTEEEEEESTTT-TCGGGCCEEEECCHHH--------HHHHHHHHHHHHSSCCCHHHHHH
T ss_pred CCCccccccccccc--ccCCCCEEEEechhhc-cCCCCceEEEEECHHH--------HHHHHHHHHhccCCCChHHHHHH
Confidence 98533221111111 1235678999999997 6799999999998887 66777666666666888999999
Q ss_pred HHhcccccH-HHHHH-HHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCC--CChHHHHHHHHHhcCeEeeC
Q 036024 167 LACLSSEGL-EAVHS-VVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHITTVP 238 (272)
Q Consensus 167 ~~~l~~~~~-~~~~~-~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~v~~ 238 (272)
.+++..... ++..+ +++.++++++.+.+.|.+. ++.+..+++++++|+.++. .+..++...| +++||.+.|
T Consensus 317 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~ 395 (444)
T 3if2_A 317 TPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERL-KAKGTLIVP 395 (444)
T ss_dssp HHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHH-HHTTEECEE
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHH-HHCCeEEec
Confidence 998885443 44444 6788899998888888763 5778878889999999984 4566666666 556999999
Q ss_pred CCCCCCCC--------CCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 239 GSGFGPGG--------EEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 239 g~~~~~~~--------~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
|+.|+... .+++|+++..+++++++++++|++++
T Consensus 396 g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~ 437 (444)
T 3if2_A 396 SEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVV 437 (444)
T ss_dssp GGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHH
T ss_pred chhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 99986432 36899999779999999999998763
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.5e-31 Score=224.89 Aligned_cols=241 Identities=23% Similarity=0.258 Sum_probs=182.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 80 (272)
|.|++..|.+. +...++..| +++.+|++++.++.++ +++..+++++++++||||||.+++.+++ .++|++++.
T Consensus 91 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l---~~l~~~~~~- 166 (337)
T 3p1t_A 91 MRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGEL---DQLRQRAGK- 166 (337)
T ss_dssp SEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTCCTTEEEEEESSCTTTCCCCCHHHH---HHHHHHCSE-
T ss_pred CeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCCCHHHH---HHHHHhCCc-
Confidence 56777776666 888888899 9999999765444444 5555788999999999999999995555 555667776
Q ss_pred EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcch
Q 036024 81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160 (272)
Q Consensus 81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (272)
+|+||+|.++...+. .. ....+++++++|+||.+|++|+|+||+++++++ ++.+..... ..+.+.
T Consensus 167 ~ivDea~~~~~~~~~-~~----~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~--~~~~~~ 231 (337)
T 3p1t_A 167 LLIDETYVDYSSFRA-RG----LAYGENELVFRSFSKSYGLAGLRLGALFGPSEL--------IAAMKRKQW--FCNVGT 231 (337)
T ss_dssp EEEECTTGGGSSCSS-SC----CCCBTTEEEEEESSSTTCCTTTCCEEEECCHHH--------HHHHHTTSC--TTCSCH
T ss_pred EEEECCChhhccccc-cc----cccCCCEEEEeeCchhccCcchheEEEEeCHHH--------HHHHHhhcC--CCCCCH
Confidence 666999998664432 11 123467799999999999999999999998887 556654432 345788
Q ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCC
Q 036024 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240 (272)
Q Consensus 161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~ 240 (272)
+.+.++.++++.. .+.++.++++.++++.+.+.|+++|+++.++ .+.|+|+..+. ..++ .++++++||.+.||+
T Consensus 232 ~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~--~~~~-~~~l~~~gi~v~~g~ 305 (337)
T 3p1t_A 232 LDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVASS-EANFVLVENAA--GERT-LRFLRERGIQVKDAG 305 (337)
T ss_dssp HHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCC-SSSEEEEECTT--THHH-HHHHHHTTEECEEGG
T ss_pred HHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCcCEECCC-CCeEEEEEcCC--HHHH-HHHHHHCCeEEEECc
Confidence 8898888888742 3346677778888999999999999888776 56677777763 3344 445566699999999
Q ss_pred CCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 241 ~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
.|+. ++++|+|+. +++++++++++|++++
T Consensus 306 ~~~~--~~~iRis~~-~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 306 QFGL--HHHIRISIG-REEDNDRLLAALAEYS 334 (337)
T ss_dssp GGTC--CSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred cCCC--CCeEEEecC-CHHHHHHHHHHHHHHh
Confidence 9875 579999986 7889999999988753
No 78
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=7.6e-33 Score=240.63 Aligned_cols=249 Identities=16% Similarity=0.159 Sum_probs=189.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeec-CCCCCcccCCCCC-------CCceEEEE-ecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLEC-GPGNNFFPDLKGT-------SRTDIIFF-CSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~-~~~~~~~~dl~~~-------~~~~~i~~-~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..|.+. |...++..| +++.+|. +++ ++.+|++.+ ++.+++++ ++||||||.+++.+++++|++
T Consensus 125 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~ 203 (412)
T 1yaa_A 125 KLVYLSKPTWANHMAIFENQGLKTATYPYWANE-TKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVD 203 (412)
T ss_dssp CCEEEEESCCTTHHHHHHTTTCCEEEEECEETT-TTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CEEEEeCCCCccHHHHHHHcCceEEEEeeecCC-CCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 56777776655 888888889 9999998 433 455664431 22345554 899999999999999999999
Q ss_pred HHHHcCCEEEEcccCCccccCC---CCCCccccCCCCC---ceEEEecCccccCCCccceeEEE--e-----cccccccC
Q 036024 73 FARNNGSIIIFDSAYAAYVTDG---CPRSIYEIPGARE---VAIEISSFSKFSGFTGVRLGWTV--V-----PEELLFSS 139 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~---~~~~~~~~~~~~~---~~i~~~s~sK~~g~~g~r~G~~~--~-----~~~~~~~~ 139 (272)
+|+++|+++|+||+|.++.+++ ...++..+....+ ++++++|+||.+|.+|+|+||++ + +++..
T Consensus 204 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~--- 280 (412)
T 1yaa_A 204 AIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIK--- 280 (412)
T ss_dssp HHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHH---
T ss_pred HHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHH---
Confidence 9999999999999999887764 2233433322233 78999999999997799999998 6 44410
Q ss_pred CcchHHHHHhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCce
Q 036024 140 GFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAP 210 (272)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~ 210 (272)
..+++.+.........+++.++|.++.+++.... .+++++++++++++++++.+.|++++ +++..+++++
T Consensus 281 -~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 359 (412)
T 1yaa_A 281 -PAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGM 359 (412)
T ss_dssp -HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSS
T ss_pred -HHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceE
Confidence 0115555554444555568899999999988553 35789999999999999999999876 8887888899
Q ss_pred EEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHh
Q 036024 211 YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEAL 271 (272)
Q Consensus 211 ~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~ 271 (272)
++|+.++ . +.+.++++++||.+.+ ++|+++.. +++++++++++|+++
T Consensus 360 ~~~~~~~---~-~~~~~~l~~~gi~v~~----------~~Ris~~~~~~~~i~~~~~~l~~~ 407 (412)
T 1yaa_A 360 FSFTGLT---P-QMVKRLEETHAVYLVA----------SGRASIAGLNQGNVEYVAKAIDEV 407 (412)
T ss_dssp EEECCCC---H-HHHHHHHHHHCEECCT----------TSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred EEeeCCC---H-HHHHHHHHhCCEEecc----------CcEEEEccCCHhHHHHHHHHHHHH
Confidence 9998663 3 3457778777999975 47999864 889999999998875
No 79
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.98 E-value=9.1e-33 Score=238.65 Aligned_cols=250 Identities=13% Similarity=0.043 Sum_probs=188.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..|.+. |...++..| +++.+|.++++++.+|++.+ ++++++++++||||||.+++.+++++|+++
T Consensus 118 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~ 197 (394)
T 2ay1_A 118 LRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASI 197 (394)
T ss_dssp CCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHH
T ss_pred CEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 56777776665 777888888 99999986434555663331 235667778999999999999999999999
Q ss_pred HHHcCCEEEEcccCCccccCC--CCCCccccCCCCCceEEEecCccccCCCccceeEEEe---cccccccCCcchHHHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV---PEELLFSSGFPVINDFN 148 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~~~~~~~~~~~~ 148 (272)
|+++|+++|+||+|.++.+++ ...++..+....+++++++|+||.+|++|+|+||+++ +++.+. ++...+.
T Consensus 198 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~----~l~~~~~ 273 (394)
T 2ay1_A 198 LEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRE----LAQGAMA 273 (394)
T ss_dssp HHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHH----HHHHHHH
T ss_pred HHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHH----HHHHHHH
Confidence 999999999999999887653 1223333322345689999999999999999999998 444311 1123333
Q ss_pred hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCC
Q 036024 149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGR 219 (272)
Q Consensus 149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~ 219 (272)
......+.+++.++|.++.++++... .++.++++++++++++++.+.|++++ +++..+.+|+|+|+.++.
T Consensus 274 ~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~- 352 (394)
T 2ay1_A 274 FLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATP- 352 (394)
T ss_dssp HHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCH-
T ss_pred HHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCH-
Confidence 33334444468899998888887541 25788999999999999999998874 777777789999987752
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL 271 (272)
Q Consensus 220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~ 271 (272)
+.+.++++++||.+.|| +|+++. .+++++++++++|+++
T Consensus 353 ---~~~~~~l~~~gi~v~~~----------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 353 ---EQVKRIKEEFGIYMVGD----------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp ---HHHHHHHHHHCEECCTT----------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred ---HHHHHHHHhCCEEecCC----------CeEEeecCCHhhHHHHHHHHHHc
Confidence 45667777779999763 599985 4899999999999875
No 80
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.97 E-value=2.4e-30 Score=221.72 Aligned_cols=239 Identities=18% Similarity=0.182 Sum_probs=184.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..|.+. +...++..| +++.+|.+. ++.+|++.+ + +++++++++||||||.+++.+++.+|++
T Consensus 117 d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~--- 191 (369)
T 3cq5_A 117 RTALGFQPSYSMHPILAKGTHTEFIAVSRGA--DFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIIN--- 191 (369)
T ss_dssp CEEEEEESSCTHHHHHHHHTTCEEEEEECCT--TSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHH---
T ss_pred CEEEEcCCChHHHHHHHHHcCCEEEEecCCc--CCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHH---
Confidence 56777766555 777788888 999999763 345554432 3 7899999999999999999666655555
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCC-ceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGARE-VAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
.+++++|+||+|.++..+ .+........+ ++++++|+||.+|++|+|+||+++++++ .+.+.....
T Consensus 192 ~~~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~-- 258 (369)
T 3cq5_A 192 VAPGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAF--------IDAVMLVRL-- 258 (369)
T ss_dssp HCSSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHH--------HHHHHTTSC--
T ss_pred hCCCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHH--------HHHHHHcCC--
Confidence 556999999999987643 23333322334 7899999999999899999999998876 555554433
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI 234 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi 234 (272)
..+.+.+.+.++.++++. .+++++.+++++++++.+.+.|++.|+++.+ ..++++|+.++ .+..++...|. ++||
T Consensus 259 ~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~-~~~~~l~~~l~-~~gi 333 (369)
T 3cq5_A 259 PYHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEELGYAVVP-SESNFVFFGDF-SDQHAAWQAFL-DRGV 333 (369)
T ss_dssp TTCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHHTCEEEC-CSSSEEEEECC-SSHHHHHHHHH-HTTE
T ss_pred CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEECC-CCCeEEEEECC-CCHHHHHHHHH-HCCE
Confidence 234888999988888874 3567889999999999999999988988875 46789999987 35566666664 5599
Q ss_pred EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
.+.||. .++++|+++. +++++++++++|+++
T Consensus 334 ~v~~~~-----~~~~iRis~~-~~~~i~~~~~~l~~~ 364 (369)
T 3cq5_A 334 LIRDVG-----IAGHLRTTIG-VPEENDAFLDAAAEI 364 (369)
T ss_dssp ECBCCS-----CTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred EEEECC-----CCCeEEEEeC-CHHHHHHHHHHHHHH
Confidence 999871 2578999986 789999999999875
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.97 E-value=9.4e-31 Score=228.39 Aligned_cols=239 Identities=17% Similarity=0.223 Sum_probs=184.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
|.|++..|++. |...++..| +++...++.+ .+.-.+ .+++|++++++||||||.+++ +. ++ ++..
T Consensus 156 d~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~~~~--~~~~k~v~l~~p~NPtG~~~~-~~-------l~--~~~~ 222 (427)
T 2hox_A 156 SKVVAHAPFYPVFREQTKYFDKKGYVWAGNAA-NYVNVS--NPEQYIEMVTSPNNPEGLLRH-AV-------IK--GCKS 222 (427)
T ss_dssp EEEEECSSCCHHHHHHHHHSCBTTEEEEEEGG-GGTTCS--CGGGEEEEEESSCTTTCCCCC-CS-------ST--TCEE
T ss_pred CEEEEeCCCcccHHHHHHHcCCeeeeecCCHH-HHHHhh--cCCceEEEEcCCCCCcccccH-HH-------Hc--CCCE
Confidence 67888887776 888888888 7776554332 111111 257899999999999999999 42 22 5667
Q ss_pred EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhhccCCcch
Q 036024 82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTCFNGASN 160 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (272)
+.|+.|.+ + ..++..+. .+++++++||||.+|++|+|+||++++ +++ ++.+.........+++.
T Consensus 223 i~d~~~~~----~-~~s~~~~~--~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l--------~~~l~~~~~~~~~~~~~ 287 (427)
T 2hox_A 223 IYDMVYYW----P-HYTPIKYK--ADEDILLFTMSKFTGHSGSRFGWALIKDESV--------YNNLLNYMTKNTEGTPR 287 (427)
T ss_dssp EEECTTCS----T-TTSCCCSC--BCCSEEEEEHHHHTSCGGGCCEEEEECCHHH--------HHHHHHHHHHHTSSCCH
T ss_pred EEeecccC----C-CCCccccC--CCceEEEEeChhcCCCCCceEEEEEECCHHH--------HHHHHHHHHhcCCCCCH
Confidence 88887753 1 23333442 567899999999999999999999995 555 67777776666666899
Q ss_pred HHHHHHHHhcccc----------cHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE--------------ecCCCceEEEee
Q 036024 161 IAQAGGLACLSSE----------GLEAVHSVVDYYKENTKILIDTLASL-GIKV--------------YGGINAPYVWAH 215 (272)
Q Consensus 161 ~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--------------~~~~~~~~~~i~ 215 (272)
+.|.++..++.+. ..+++++.++.++++++.+.+.|+++ |+.+ ..|++++|+|++
T Consensus 288 ~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~ 367 (427)
T 2hox_A 288 ETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVK 367 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEE
T ss_pred HHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEE
Confidence 9999998888753 23567888999999999999999987 6654 245579999999
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 216 FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
++. +..+++..+++++||.+.||+.|+. +++++|+|+..+++++++++++|++++
T Consensus 368 ~~~-~~~~~~~~ll~~~gI~v~pg~~f~~-~~~~~Ris~~~~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 368 CEW-EEDKDCYQTFQNGRINTQNGVGFEA-SSRYVRLSLIKTQDDFDQLMYYLKDMV 422 (427)
T ss_dssp ECS-GGGCSHHHHHHHTTEECEEGGGGTS-CTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred CCC-cHHHHHHHHHHHCCEEEcCCCccCC-CCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 975 4456778888777999999999976 678999999889999999999998763
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.97 E-value=1.3e-29 Score=219.13 Aligned_cols=250 Identities=15% Similarity=0.123 Sum_probs=183.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCC--CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTS--RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|.|++..|++. +...++..| +++.+|......+.--++... +++++++++|+||||.+++ +++|+++|+++|+
T Consensus 128 d~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~---~~~l~~~~~~~~~ 204 (398)
T 3a2b_A 128 DYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN---LPELTSIANEFDA 204 (398)
T ss_dssp CEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTC
T ss_pred CEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC---HHHHHHHHHHcCc
Confidence 56777777666 777778888 999888721101110022111 7899999999999999988 8999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCc-eEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh-hhhccCC
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREV-AIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-ICTCFNG 157 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 157 (272)
++|+||+|..+.++..+.++....+..++ .++++|+||.+|.+| ||+++++++ ++.+... ......+
T Consensus 205 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~--------~~~l~~~~~~~~~~~ 273 (398)
T 3a2b_A 205 AVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADV--------IDFLKHNARSVMFSA 273 (398)
T ss_dssp EEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHH--------HHHHHHHCHHHHSSB
T ss_pred EEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHH--------HHHHHHhcccceecC
Confidence 99999999877664333344333233344 599999999999768 999998877 5555543 2223333
Q ss_pred cchHHHH-HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeE
Q 036024 158 ASNIAQA-GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHIT 235 (272)
Q Consensus 158 ~~~~~~~-a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~ 235 (272)
.+.+.|. ++.++++. .++.++.+++++++++++.+.|+++|+++..+ .++++|+.++. .+..++...|+++ ||.
T Consensus 274 ~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~g~~~~~~~~~~~~~~~l~~~l~~~-gi~ 349 (398)
T 3a2b_A 274 SMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDHGFDLGAT-ESPILPIFIRSNEKTFWVTKMLQDD-GVF 349 (398)
T ss_dssp CCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHTTCCBCSC-CSSEEEEECCCHHHHHHHHHHHHHT-TEE
T ss_pred CCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhcCCCcCCC-CCCEEEEEcCCHHHHHHHHHHHHHC-CcE
Confidence 4555565 45566654 24557889999999999999999989888765 47899999973 3455677777777 999
Q ss_pred eeCCCCCCC-CCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 236 TVPGSGFGP-GGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 236 v~~g~~~~~-~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
+.||..|+. .+.+++|+++.. +++++++++++|+++
T Consensus 350 v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~ 388 (398)
T 3a2b_A 350 VNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKV 388 (398)
T ss_dssp CEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 999998863 346899999864 999999999999875
No 83
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.96 E-value=3.4e-28 Score=209.87 Aligned_cols=246 Identities=18% Similarity=0.182 Sum_probs=182.8
Q ss_pred cccccccCcc-c--chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAG-D--LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~-~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+ . +...++..| +++.+|.+++ +.+|++.+ + +++++++++|+||||.+++ +++|+++
T Consensus 110 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l 184 (393)
T 1vjo_A 110 DVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWG--EVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGEL 184 (393)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHH
T ss_pred CEEEEEcCChhHHHHHHHHHHcCCceEEEecCCC--CCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHH
Confidence 4566665544 3 666777788 9999999764 34453331 4 7899999999999999987 8899999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh---
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI--- 150 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~--- 150 (272)
|+++|+++|+||+|.. +..+..+.. .+..++++|+||.++.++ |+||++++++. .+.+...
T Consensus 185 ~~~~~~~li~Dea~~~---g~~~~~~~~----~~~di~~~s~sK~l~~~~-~~G~l~~~~~~--------~~~~~~~~~~ 248 (393)
T 1vjo_A 185 CREFGTLLLVDTVTSL---GGVPIFLDA----WGVDLAYSCSQKGLGCSP-GASPFTMSSRA--------IEKLQRRRTK 248 (393)
T ss_dssp HHHHTCEEEEECTTTT---TTSCCCTTT----TTCSEEECCSSSTTCSCS-SCEEEEECHHH--------HHHHHTCSSC
T ss_pred HHHcCCEEEEECCccc---cCcCCcccc----cCccEEEEcCcccccCCC-ceEEEEECHHH--------HHHHhccCCC
Confidence 9999999999999982 221222211 234589999999998677 99999999877 3333211
Q ss_pred ----------------hhhccC-CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC---ce
Q 036024 151 ----------------ICTCFN-GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN---AP 210 (272)
Q Consensus 151 ----------------~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~ 210 (272)
...... +.+.+.+.++.++++.....++++.+++++++++++.+.|+++|+++..+.+ +.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 328 (393)
T 1vjo_A 249 VANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPT 328 (393)
T ss_dssp CSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSS
T ss_pred CCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCc
Confidence 001222 5788888888888874333457889999999999999999988888877643 46
Q ss_pred EEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHHhC
Q 036024 211 YVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEALF 272 (272)
Q Consensus 211 ~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~~l 272 (272)
++++.++ +.+..++...|.+++||.+.||+.|.. .+++|+++ ..+++++++++++|++++
T Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 329 LTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELA--GKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGT--TTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHhhCCEEEecCccccC--CCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 7888886 456677777777777999999986643 68999994 346778999999998763
No 84
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=2.2e-27 Score=204.07 Aligned_cols=254 Identities=16% Similarity=0.155 Sum_probs=183.6
Q ss_pred cccccccCccc---chHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD---LEDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~---~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. +...+...| +++.++.+++....++ +++ .++++++++++|+||||.+.+ +++|+++|
T Consensus 96 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 172 (386)
T 2dr1_A 96 GKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVA 172 (386)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHH
Confidence 55666665553 666777788 9999998754223333 222 267899999999999999987 89999999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc--------chHHH
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF--------PVIND 146 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~--------~~~~~ 146 (272)
+++|+++|+|++|..+... .++.. .+..++++|+||.++.+ .++||++++++.+..... .+...
T Consensus 173 ~~~~~~li~D~a~~~~~~~---~~~~~----~~~di~~~s~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
T 2dr1_A 173 KEHDKLVFVDAVSAMGGAD---IKFDK----WGLDVVFSSSQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLY 244 (386)
T ss_dssp HHTTCEEEEECTTTBTTBC---CCTTT----TTCSEEEEETTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHH
T ss_pred HHcCCeEEEEccccccCcc---ccccc----cCCcEEEEeccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHH
Confidence 9999999999999865432 12222 23459999999999855 248999999876321000 00000
Q ss_pred HHhh--hhhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecC-CC
Q 036024 147 FNRI--ICTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFP-GR 219 (272)
Q Consensus 147 ~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~-~~ 219 (272)
+... ......+.+...+.++.++++..... ++++.+++++++++++.+.|+++|+++..+. .+.++|+.++ +.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 324 (386)
T 2dr1_A 245 VKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGI 324 (386)
T ss_dssp HHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTC
T ss_pred HHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCC
Confidence 1111 12334457788888888877642222 3688999999999999999999888887764 3788999997 55
Q ss_pred ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
+..++...|.++ ||.+.||..+. ..+++|+++. .+++++++++++|+++
T Consensus 325 ~~~~~~~~l~~~-gi~v~~~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 375 (386)
T 2dr1_A 325 KGDEVYEAMRKR-GFELAKGYGSV--KEKTFRIGHMGYMKFEDIQEMLDNLREV 375 (386)
T ss_dssp CHHHHHHHHHHT-TEECEECCGGG--TTTEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHC-CeEEecCcccc--CCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 667777777777 99999988543 3579999986 5999999999999875
No 85
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.96 E-value=2.6e-28 Score=210.88 Aligned_cols=253 Identities=18% Similarity=0.142 Sum_probs=183.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC----CCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+++. +...++..| +++.+|......+.--++.. .+++++++++|+||||.+++ +++|+++|+++
T Consensus 128 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 204 (399)
T 3tqx_A 128 DAIISDELNHASIIDGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD---LKSICDLADKY 204 (399)
T ss_dssp CEEEEETTCCHHHHHHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC---HHHHHHHHHHT
T ss_pred CEEEECCcccHHHHHHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHc
Confidence 56777776666 777788888 89988863211111101111 17899999999999999999 89999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh--hc
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC--TC 154 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 154 (272)
|+++|+||+|+...++....++....+ ..+..++++|+||.+| |++.||++++++. ++.+..... ..
T Consensus 205 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~~~--------~~~~~~~~~~~~~ 274 (399)
T 3tqx_A 205 NALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHKEI--------IEWLRNRSRPYLF 274 (399)
T ss_dssp TCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECHHH--------HHHHHHHCHHHHS
T ss_pred CCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCHHH--------HHHHHHhCcceec
Confidence 999999999964333433333333322 2344599999999998 3344999999887 555544322 22
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-ChHHHHHHHHHhcC
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTH 233 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~g 233 (272)
..+.+...+.++.+.++... ++.++.+++++++++++.+.|+++|+++.++ .+.++|+.++.. +..++...|+++ |
T Consensus 275 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-g 351 (399)
T 3tqx_A 275 SNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGFQLVPG-NHPIIPVMLGDAQLATNMADHLLQE-G 351 (399)
T ss_dssp SCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-SSSEEEEEEECHHHHHHHHHHHHHT-T
T ss_pred cCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHC-C
Confidence 33466677777777766322 5678899999999999999999999888754 677888888743 455677777665 9
Q ss_pred eEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 234 ITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 234 i~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
|.+.|+..+. +.+.+++|+++. .+++++++++++|++++
T Consensus 352 i~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 393 (399)
T 3tqx_A 352 IYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVG 393 (399)
T ss_dssp EECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred CEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHH
Confidence 9999876543 445679999984 69999999999998763
No 86
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.96 E-value=7.9e-28 Score=208.22 Aligned_cols=250 Identities=14% Similarity=0.116 Sum_probs=179.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----C--CCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----T--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...++..| +++.+|.+. . .++++ . ++++++++++|+||||.+++ +++|+++|+
T Consensus 133 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~d---~-~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~ 205 (401)
T 2bwn_A 133 LIIYSDSLNHASMIEGIKRNAGPKRIFRHND---V-AHLRELIAADDPAAPKLIAFESVYSMDGDFGP---IKEICDIAE 205 (401)
T ss_dssp CEEEEETTCCHHHHHHHHHSCCCEEEECTTC---H-HHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC---HHHHHHHHH
T ss_pred CEEEECchhhHHHHHHHHHcCCeEEEEcCCC---H-HHHHHHHHhhccCCceEEEEecCcCCCCCcCC---HHHHHHHHH
Confidence 55666665554 666667778 999998751 1 11222 1 47899999999999999998 899999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh--
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC-- 152 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-- 152 (272)
++|+++|+||+|....+++...++....+. .+..++++|+||.+|.+| ||+++++++ .+.+.....
T Consensus 206 ~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~--------~~~l~~~~~~~ 274 (401)
T 2bwn_A 206 EFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARM--------VDAVRSYAPGF 274 (401)
T ss_dssp HHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHH--------HHHHHHHCHHH
T ss_pred HcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHHH--------HHHHHHhCcCc
Confidence 999999999999965544333333222111 234689999999999888 999998766 444433221
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHh
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEK 231 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~ 231 (272)
....+.+.+.+.++.++++......+++.+++++++++++.+.|+++|+++.++. +.++|+.++. .+..++...|+++
T Consensus 275 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~ 353 (401)
T 2bwn_A 275 IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHG-SHIVPVVIGDPVHTKAVSDMLLSD 353 (401)
T ss_dssp HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCS-SSCEEEECCCHHHHHHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccCCC-CCeEEEEeCChHHHHHHHHHHHhc
Confidence 1122244567766666665332234578889999999999999998888887764 4588999874 3445667777656
Q ss_pred cCeEeeCCCCCCCC-CCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPG-GEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~-~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
+||.+.|+..|+.. +.+++|+++. .+++++++++++|++++
T Consensus 354 ~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~ 397 (401)
T 2bwn_A 354 YGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW 397 (401)
T ss_dssp HCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred CCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHH
Confidence 69999999877632 4578999975 58999999999998864
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=3.5e-27 Score=202.52 Aligned_cols=248 Identities=14% Similarity=0.154 Sum_probs=174.2
Q ss_pred cccccccCccc-chHHh---cccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEV---GKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~---~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+. +.... +..| +++.+|.+++ +.+|++. .++++++++++|+||||.+++ +++|.++
T Consensus 90 d~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l 164 (384)
T 1eg5_A 90 RTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSR--GVVKLEELEKLVDEDTFLVSIMAANNEVGTIQP---VEDVTRI 164 (384)
T ss_dssp CEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTT--SCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHH
T ss_pred CEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCC--CccCHHHHHHHhCCCCeEEEEECCCCCcccccC---HHHHHHH
Confidence 56676666544 43433 5668 9999998754 4445332 257899999999999999999 7899999
Q ss_pred HHHcC--CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHhh
Q 036024 74 ARNNG--SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRI 150 (272)
Q Consensus 74 ~~~~~--~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~ 150 (272)
|++++ +++|+||+|.. +..+..+..+ +..+++.|+||.+|++| +||++++++. +..... .....
T Consensus 165 ~~~~~~~~~li~Dea~~~---~~~~~~~~~~----~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~----~~~~~ 231 (384)
T 1eg5_A 165 VKKKNKETLVHVDAVQTI---GKIPFSLEKL----EVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIH----GGGQE 231 (384)
T ss_dssp HHHHCTTCEEEEECTTTT---TTSCCCCTTT----CCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBC----SSCTT
T ss_pred HHhcCCceEEEEEhhhhc---CCcccCchhc----CCCEEEecHHHhcCCCc--eEEEEEcCCCccccccc----cCccc
Confidence 99999 99999999972 2222222222 34589999999999778 7999998875 211110 00000
Q ss_pred hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecCCCChHHHHHH
Q 036024 151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFPGRKSWDVFAE 227 (272)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~~~~~~~~~~~ 227 (272)
......+.+.+.+.++.++++. ..+++++.+++++++++++.+.|++.|+++..+. .+.++++.+++.+..++...
T Consensus 232 ~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (384)
T 1eg5_A 232 RGLRSGTQNVPGIVGAARAMEI-AVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNL 310 (384)
T ss_dssp TTTBCSCCCHHHHHHHHHHHHH-HHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHH
T ss_pred ccccCCCCChHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeCCCCHHHHHHH
Confidence 1123445788888888888774 2356788999999999999999998888887653 23567777776566666666
Q ss_pred HHHhcCeEeeCCCCCCCC-----------------CCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 228 ILEKTHITTVPGSGFGPG-----------------GEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~-----------------~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
| .++||.+.+|..|++. +.+++|+++. .+++++++++++|+++
T Consensus 311 l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 372 (384)
T 1eg5_A 311 L-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEI 372 (384)
T ss_dssp H-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred H-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 6 4569999999877542 1478999986 5999999999999875
No 88
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.95 E-value=1.1e-26 Score=197.24 Aligned_cols=251 Identities=12% Similarity=0.036 Sum_probs=175.7
Q ss_pred cccccccC-cccch--HHhcccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-
Q 036024 4 DSSVIVGQ-AGDLE--DEVGKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN- 77 (272)
Q Consensus 4 d~~~~~~~-~~~~~--~~~~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~- 77 (272)
|.|++..+ ++.+. ..++..| +++.++.+++..+.+| +++ ++++++++++|+||||.+++ +++|.++|+++
T Consensus 76 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 151 (352)
T 1iug_A 76 ERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK-EGYAGLLLVHSETSTGALAD---LPALARAFKEKN 151 (352)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC-SSCSEEEEESEETTTTEECC---HHHHHHHHHHHC
T ss_pred CeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc-cCCcEEEEEEecCCcceecC---HHHHHHHHHhhC
Confidence 55666665 33343 3445578 9999999765333443 444 68899999999999999998 78999999999
Q ss_pred -CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCc-----chHHHHHhh
Q 036024 78 -GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGF-----PVINDFNRI 150 (272)
Q Consensus 78 -~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~-----~~~~~~~~~ 150 (272)
|+++|+|++|... ..+..+... +..++++|+||.+ |.+| +||++++++.+..... .+...+...
T Consensus 152 ~~~~li~D~a~~~~---~~~~~~~~~----~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (352)
T 1iug_A 152 PEGLVGADMVTSLL---VGEVALEAM----GVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQ 222 (352)
T ss_dssp TTCEEEEECTTTBT---TBCCCSGGG----TCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHH
T ss_pred CCCEEEEECCcccc---Ccceecccc----CeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhc
Confidence 9999999999732 112222222 2348899999955 4334 7999998876321000 001111111
Q ss_pred -hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEEeecC-CCChHHHHHH
Q 036024 151 -ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVWAHFP-GRKSWDVFAE 227 (272)
Q Consensus 151 -~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~i~l~-~~~~~~~~~~ 227 (272)
......+.+...+.++.+++.... +++++.+++++++++++.+.|+++|+++..+. .+.++|+.++ +.+..++...
T Consensus 223 ~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (352)
T 1iug_A 223 KEGESAWTPAINLVLAVAAVLEEVL-PRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVPYARVKEA 301 (352)
T ss_dssp TTTCCSSCCCHHHHHHHHHHHHHHG-GGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTCCHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCCCHHHHHHH
Confidence 122334566777776666665322 23688999999999999999998899888764 6788999997 5566777777
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
|.++ ||.+.+|.. +.+.+++|+++. .+++++++++++|+++
T Consensus 302 l~~~-gi~v~~~~~--~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 344 (352)
T 1iug_A 302 FAQR-GAVIAGGQG--PLKGKVFRLSLMGAYDRYEALGVAGMFREV 344 (352)
T ss_dssp HHTT-TEECEECCG--GGTTTEEEECCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHC-CEEEEeCCC--ccCCCEEEEEccccCCHHHHHHHHHHHHHH
Confidence 7666 999999873 234679999985 4799999999999875
No 89
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.95 E-value=1.9e-27 Score=204.58 Aligned_cols=251 Identities=9% Similarity=0.020 Sum_probs=177.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 80 (272)
|.|++..+++. +...++..| +++.+|......+.--++.. ++++++++++||||||.+++ +++|+++|+++|++
T Consensus 124 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 200 (384)
T 1bs0_A 124 DRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGW 200 (384)
T ss_dssp CEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCE
T ss_pred cEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccC---HHHHHHHHHHcCcE
Confidence 55666666665 666777788 88888853110111002222 24678888899999999998 88999999999999
Q ss_pred EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh--hhccCCc
Q 036024 81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII--CTCFNGA 158 (272)
Q Consensus 81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 158 (272)
+|+||+|..+.++....++....+. +..++++|+||.+|.+| ||+++++++ ++.+.... .....+.
T Consensus 201 li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~~~--------~~~l~~~~~~~~~~~~~ 268 (384)
T 1bs0_A 201 LMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSSTV--------ADYLLQFARHLIYSTSM 268 (384)
T ss_dssp EEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECHHH--------HHHHHHHCHHHHSSBCC
T ss_pred EEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCHHH--------HHHHHHhchhhhcCCCC
Confidence 9999999876543212222222111 12389999999999667 999998777 44444432 1122247
Q ss_pred chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEee
Q 036024 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTV 237 (272)
Q Consensus 159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~ 237 (272)
+.+.+.++.+.++.....+.++.+++++++++++.+.|+++|+++.+ ..++++|+.++. .+..++...|.++ ||.+.
T Consensus 269 ~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~v~ 346 (384)
T 1bs0_A 269 PPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLAD-SCSAIQPLIVGDNSRALQLAEKLRQQ-GCWVT 346 (384)
T ss_dssp CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECS-CCSSBCCEEEESHHHHHHHHHHHHHT-TEECC
T ss_pred CHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCCEEEEEeCCHHHHHHHHHHHHHC-CcEEE
Confidence 77888777777763221156788999999999999999999988875 467788888863 2355667777666 99999
Q ss_pred CCCCCC-CCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 238 PGSGFG-PGGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 238 ~g~~~~-~~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
++..|+ +.+.+++|+++.. +++++++++++|+++
T Consensus 347 ~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 347 AIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp EECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 998776 3346789999753 899999999999875
No 90
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=2.8e-27 Score=206.57 Aligned_cols=251 Identities=14% Similarity=0.177 Sum_probs=180.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-C-CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-S-RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
|.|++..+++. +...++..| +++.++...-..+.--++.. + ++++|++++++||||.+++ +++|+++|+++|+
T Consensus 149 d~vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~---l~~l~~l~~~~g~ 225 (427)
T 2w8t_A 149 EYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP---LKEMVAVAKKHGA 225 (427)
T ss_dssp CEEEEETTCCHHHHHHHHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC---HHHHHHHHHHTTC
T ss_pred CEEEECCcccHHHHHHHHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCC
Confidence 55666666655 666677778 88888742110110002211 1 7899999999999999998 8999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh--hhccC
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII--CTCFN 156 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 156 (272)
++|+||+|..+.++....++....+ .++..++++|+||.+|++| ||++++++++ +.+.... .....
T Consensus 226 ~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~--------~~l~~~~~~~~~~~ 294 (427)
T 2w8t_A 226 MVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKF--------EAVRLACRPYIFTA 294 (427)
T ss_dssp EEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTG--------GGGGGTCHHHHSSC
T ss_pred EEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHH--------HHHHHhcccccccC
Confidence 9999999998777643444443222 2345799999999999777 9999988773 3333321 11233
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVWAHFPG-RKSWDVFAEILEKTHI 234 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~i~l~~-~~~~~~~~~ll~~~gi 234 (272)
+.+...+.++.+.++... +.++++++++++++++++.|+++|+.+..+. .+.++|+.+++ ....++...|+++ ||
T Consensus 295 ~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-Gi 371 (427)
T 2w8t_A 295 SLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDG-GL 371 (427)
T ss_dssp CCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEEEEESSHHHHHHHHHHHHHT-TE
T ss_pred CCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEEEEECCHHHHHHHHHHHHHC-Ce
Confidence 466666666656665322 2477889999999999999998898887434 67889999874 2345677777766 99
Q ss_pred EeeCCCCCC-CCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 235 TTVPGSGFG-PGGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 235 ~v~~g~~~~-~~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
.+.++..|+ +.+.+++|+++.. +++++++++++|+++
T Consensus 372 ~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~ 411 (427)
T 2w8t_A 372 YVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAA 411 (427)
T ss_dssp ECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 999998776 3346799999864 999999999999875
No 91
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.95 E-value=1.6e-27 Score=206.28 Aligned_cols=248 Identities=16% Similarity=0.116 Sum_probs=177.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-C---CceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-S---RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+++. +...++..| +++.++......+.-.++.. + +++++++++||||||.+++ +++|.++|+++
T Consensus 130 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~ 206 (401)
T 1fc4_A 130 DAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN---LKGVCDLADKY 206 (401)
T ss_dssp CEEEEETTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC---HHHHHHHHHHT
T ss_pred CEEEEcchhHHHHHHHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC---HHHHHHHHHHc
Confidence 55666666653 566677778 88888742110110001111 1 7899999999999999998 89999999999
Q ss_pred CCEEEEcccCC-cccc-CCCCCCccc-cCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhhh--
Q 036024 78 GSIIIFDSAYA-AYVT-DGCPRSIYE-IPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRII-- 151 (272)
Q Consensus 78 ~~~vi~D~~~~-~~~~-~~~~~~~~~-~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-- 151 (272)
|+++|+||+|+ ++.. .+.. ... ..-.++..++++|+||.+ |.+| ||+++++++ ++.+....
T Consensus 207 ~~~li~De~~~~g~~~~~g~~--~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~~~~--------~~~l~~~~~~ 273 (401)
T 1fc4_A 207 DALVMVDDSHAVGFVGENGRG--SHEYCDVMGRVDIITGTLGKALGGASG---GYTAARKEV--------VEWLRQRSRP 273 (401)
T ss_dssp TEEEEEECTTTTTTSSTTSCC--HHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEECHHH--------HHHHHHHCHH
T ss_pred CCEEEEECcccccccCCCCCc--cHHHcCCCcCCcEEEecchhhccCCCC---EEEEcCHHH--------HHHHHHhCcC
Confidence 99999999996 6653 2221 111 111224469999999999 5454 999998777 45554433
Q ss_pred hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHH
Q 036024 152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILE 230 (272)
Q Consensus 152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~ 230 (272)
.....+.+.+.+.++.+.++... ..++.+++++++++++.+.|+++|+++.+ ..++++|+.+++ .+..++...|.+
T Consensus 274 ~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~ 350 (401)
T 1fc4_A 274 YLFSNSLAPAIVAASIKVLEMVE--AGSELRDRLWANARQFREQMSAAGFTLAG-ADHAIIPVMLGDAVVAQKFARELQK 350 (401)
T ss_dssp HHHSCCCCHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHTTCCBCC-SSSSEEEEEEECHHHHHHHHHHHHH
T ss_pred ceeCCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccC-CCCCEEEEEcCChHHHHHHHHHHHH
Confidence 11244578888888887776321 13678899999999999999998888774 578899999874 234566666666
Q ss_pred hcCeEeeCCCCCCC-CCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 231 KTHITTVPGSGFGP-GGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 231 ~~gi~v~~g~~~~~-~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
+ ||.+.++..|+. .+.+++|+++. .+++++++++++|+++
T Consensus 351 ~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 393 (401)
T 1fc4_A 351 E-GIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRI 393 (401)
T ss_dssp T-TEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred C-CcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5 999999987763 34578999985 5899999999999875
No 92
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=3.5e-26 Score=197.76 Aligned_cols=245 Identities=18% Similarity=0.216 Sum_probs=172.1
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..+.+. |...++..| +++.+|.+++ +.+|++. .+++++|++++|+||||.+++ +++|++
T Consensus 114 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~ 188 (406)
T 1kmj_A 114 DNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQLETLPTLFDEKTRLLAITHVSNVLGTENP---LAEMIT 188 (406)
T ss_dssp CEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT--SCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCC---HHHHHH
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCC--CCcCHHHHHHHhccCCeEEEEeCCCccccCcCC---HHHHHH
Confidence 55666665432 334456678 9999998754 4455443 267899999999999999999 899999
Q ss_pred HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
+|+++|+++|+|++|..+.. +..+... +..++++|+||.+|.+| +||+++++++. +.+.....
T Consensus 189 l~~~~~~~li~D~~~~~g~~---~~~~~~~----~~d~~~~s~~K~~g~~G--~G~~~~~~~~~--------~~~~~~~~ 251 (406)
T 1kmj_A 189 LAHQHGAKVLVDGAQAVMHH---PVDVQAL----DCDFYVFSGHKLYGPTG--IGILYVKEALL--------QEMPPWEG 251 (406)
T ss_dssp HHHHTTCEEEEECTTTTTTS---CCCHHHH----TCSEEEEEGGGTTSCTT--CEEEEECHHHH--------HHCCCSSC
T ss_pred HHHHcCCEEEEEchhhcCCC---CCccccc----CCCEEEEEchhccCCCC--cEEEEEeHHHH--------hhcCCccc
Confidence 99999999999999986321 1222222 24589999999998777 89999988763 33322110
Q ss_pred ---------------------hccCCcchHHHHHHH-HhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-C
Q 036024 153 ---------------------TCFNGASNIAQAGGL-ACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-N 208 (272)
Q Consensus 153 ---------------------~~~~~~~~~~~~a~~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~ 208 (272)
....+++.+.+.++. +.++.....++++.+++++++++++.+.|+++ |+++..+. .
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 331 (406)
T 1kmj_A 252 GGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNR 331 (406)
T ss_dssp STTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTC
T ss_pred CCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCc
Confidence 111224555555444 44442222356788899999999999999998 88888762 3
Q ss_pred ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 209 APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 209 ~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
+.++++.+++.+..++...| .++||.+.+|..|.. +.++++|+++.. +++++++++++|+++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~ 401 (406)
T 1kmj_A 332 LGVIAFNLGKHHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI 401 (406)
T ss_dssp CSEEEEEETTCCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence 44555567755566666555 555999999986542 225899999753 899999999999875
No 93
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.95 E-value=2.5e-26 Score=197.19 Aligned_cols=254 Identities=14% Similarity=0.176 Sum_probs=175.4
Q ss_pred cccccccCcc--c-chHHhcccc-eeEEeecCCCCCcccC-CCCC---CCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAG--D-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT---SRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~--~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+ . +...++..| +++.+|.+++..+.+| +++. .+++++++++|+||||.+++ +++|.++|+
T Consensus 78 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~ 154 (384)
T 3zrp_A 78 DKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIR 154 (384)
T ss_dssp CEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHG
T ss_pred CEEEEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHH
Confidence 5566654433 1 445557778 9999999865333333 2221 37899999999999999998 889999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC-Cc----c---hHHHH
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-GF----P---VINDF 147 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-~~----~---~~~~~ 147 (272)
++|+++|+|++|..... +..+... +..++++|+||.++ ++.++||++++++.+... .. . -...+
T Consensus 155 ~~~~~li~D~a~~~~~~---~~~~~~~----~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (384)
T 3zrp_A 155 KYVELIVVDGVSSVGAE---EVKAEEW----NVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNW 226 (384)
T ss_dssp GGEEEEEEECTTTTTTS---CCCTTTT----TCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHH
T ss_pred hcCCEEEEECcccccCc---ccccccc----CCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHH
Confidence 99999999999874321 1122221 23489999999885 334489999988873211 00 0 00111
Q ss_pred Hhhh------hhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----CceEEEeec
Q 036024 148 NRII------CTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAPYVWAHF 216 (272)
Q Consensus 148 ~~~~------~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~i~l 216 (272)
.... .... .+.+...+.++.+.+.......+++++++++++++++.+.|+++|+++..+. .+.++|+.+
T Consensus 227 ~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 306 (384)
T 3zrp_A 227 LPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVIL 306 (384)
T ss_dssp HHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEEC
T ss_pred HHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEEC
Confidence 1100 1111 2456666665556665323334688999999999999999999898887765 477888999
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
++.+..++...|.++ ||.+.+|..+.. +++|+++. .+++++++++++|++++
T Consensus 307 ~~~~~~~~~~~l~~~-gi~v~~g~~~~~---~~iRi~~~~~~~~e~i~~~~~~l~~~l 360 (384)
T 3zrp_A 307 KVADPQKVLAGTVNE-GVEFAPGVHPAF---KYFRIGHMGWVTPNDAIIAISVIERTL 360 (384)
T ss_dssp SSSCHHHHHHHHHTT-TCCCEECCCTTC---CEEEEECCSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHC-CEEEecCCCCCc---CEEEEeccccCCHHHHHHHHHHHHHHH
Confidence 876667777777766 999999875432 89999964 58999999999998763
No 94
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.94 E-value=7.9e-26 Score=192.80 Aligned_cols=252 Identities=15% Similarity=0.148 Sum_probs=175.2
Q ss_pred ccccccc-Ccc-c-chHHhcccc-eeEEeecCCCCCcccCCCC-------CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVG-QAG-D-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~-~~~-~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++.. +++ . +...+...| +++.++++.+ +..|++. .++++++++++|+||||.+++ +++|.+
T Consensus 81 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~ 155 (366)
T 1m32_A 81 DKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEV--ARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGA 155 (366)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTT--SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHH
T ss_pred CeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---HHHHHH
Confidence 5555553 333 2 556667778 9999998754 3344332 136889999999999999998 889999
Q ss_pred HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcch-------HH
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV-------IN 145 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~-------~~ 145 (272)
+|+++|+++|+|++|+.... +..+... +..++++|+||.++ .+.++||++++++......... ..
T Consensus 156 l~~~~~~~li~Dea~~~~~~---~~~~~~~----~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 1m32_A 156 LAHRYGKTYIVDAMSSFGGI---PMDIAAL----HIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSRSLSLDLYA 227 (366)
T ss_dssp HHHHHTCEEEEECTTTTTTS---CCCTTTT----TCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCSCSTTCHHH
T ss_pred HHHHcCCEEEEECCccccCc---Ccccccc----CccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCCCccccHHH
Confidence 99999999999999985322 1222211 23489999999874 2234799999987743221100 00
Q ss_pred HHHhhhh---hccCCcchHHHHHHHHhcccccHHH-HHHHHHHHHHHHHHHHHHHHhCCCeEecC---CCceEEEeecC-
Q 036024 146 DFNRIIC---TCFNGASNIAQAGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLASLGIKVYGG---INAPYVWAHFP- 217 (272)
Q Consensus 146 ~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~i~l~- 217 (272)
.+..... ....+.+...+.++.++++...... +++.+++++++++++.+.|+++|+++..+ ..+.++|+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (366)
T 1m32_A 228 QWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPE 307 (366)
T ss_dssp HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCC
T ss_pred HHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCc
Confidence 1111101 1123567777776777766322221 67889999999999999999888877654 35678999987
Q ss_pred --CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 218 --GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 218 --~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
+.+..++...|.++ ||.+.+|..| +.+++|+++. .+++++++++++|++++
T Consensus 308 ~~~~~~~~~~~~l~~~-gi~v~~~~~~---~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 362 (366)
T 1m32_A 308 DPQYRFSEFYRRLKEQ-GFVIYPGKVS---QSDCFRIGNIGEVYAADITALLTAIRTAM 362 (366)
T ss_dssp CTTCCHHHHHHHHHHT-TEECEECCCS---SSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHHHHC-CEEEECCcCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 44566777777666 9999999877 3679999975 48999999999998864
No 95
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.94 E-value=1.2e-25 Score=191.49 Aligned_cols=231 Identities=14% Similarity=0.124 Sum_probs=170.6
Q ss_pred hHHhcccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-CCEEEEcccCCcccc
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-GSIIIFDSAYAAYVT 92 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~vi~D~~~~~~~~ 92 (272)
...++..| +++.++.+.+..+.++ ++..++++++++++|+||||.+++ +++|.++|+++ |+++|+|++|..+..
T Consensus 99 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~ 175 (362)
T 3ffr_A 99 YEFAGELGREAYKEEAAFGKGFYPADITVPADAEIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYP 175 (362)
T ss_dssp HHHHHHTTCEEEEEECCTTCCCCGGGCCCCTTCCEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSS
T ss_pred HHHHHHhCCCeEEEecCCCCCCCHHHHhccCCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCc
Confidence 34566778 9999998755444443 443478999999999999999998 88899999999 999999999875322
Q ss_pred CCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhh-------------------
Q 036024 93 DGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIIC------------------- 152 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 152 (272)
. ..+.. ..++++|+||.++ .+| +|+++++++. ++.+.....
T Consensus 176 ~---~~~~~------~d~~~~s~~K~~~~~~G--~g~~~~~~~~--------~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 236 (362)
T 3ffr_A 176 K---FDWTK------IDSVFFSVQKCFGLPAG--LGVWILNDRV--------IEKSKALLAKRKSIGTYHTIPSMLEKAR 236 (362)
T ss_dssp C---CCTTS------CSEEEEETTSTTCCCSC--CEEEEEEHHH--------HHHHHHHHHTTCCCCSTTSHHHHHHHHT
T ss_pred c---cChhH------CcEEEEecccccCCCCc--eEEEEECHHH--------HHHhhhccccCCCCcccccHHHHHHHhh
Confidence 1 11111 2388999999998 677 5778888876 333332221
Q ss_pred --hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCCCChHHHH
Q 036024 153 --TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPGRKSWDVF 225 (272)
Q Consensus 153 --~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~~~~~~~~ 225 (272)
....+++...+.++..++.......+++.+++++++++++.+.|+++ |+++..+ ..+.++|+.+++ +..++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 315 (362)
T 3ffr_A 237 VNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-LPGEIN 315 (362)
T ss_dssp TTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-CHHHHH
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-CHHHHH
Confidence 11445666777666666653222336889999999999999999998 8888762 246778888887 677777
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 226 AEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
..|.++ ||.+.+|..+ .+.+++|+++. .+++++++++++|++++
T Consensus 316 ~~l~~~-gi~~~~g~~~--~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 316 KILEPF-DMAVGAGYGS--KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp HHHGGG-TEEEEECSGG--GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHC-CeEEecCccc--cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 777777 9999998543 34689999964 58999999999998864
No 96
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.94 E-value=9.8e-26 Score=194.28 Aligned_cols=246 Identities=13% Similarity=0.097 Sum_probs=172.4
Q ss_pred cccccccCccc-c--hHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-L--EDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~--~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. + ...++..| +++.+|.++++.+.+| +++ .++++++++++|+||||.+++ +++|.++|
T Consensus 84 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 160 (392)
T 2z9v_A 84 DVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDAIGALV 160 (392)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHHHHHHH
T ss_pred CEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHHHHHHH
Confidence 55666665332 2 34445578 9999999765333333 222 257899999999999999998 78999999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhh---
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRI--- 150 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~--- 150 (272)
+++|+++|+|++|+.. ..+..+..+ +..++++|+||.+ |.+| +||++++++. ++.+...
T Consensus 161 ~~~~~~li~D~a~~~g---~~~~~~~~~----~~d~~~~s~sK~~~~~~g--~G~l~~~~~~--------~~~l~~~~~g 223 (392)
T 2z9v_A 161 SAHGAYLIVDAVSSFG---GMKTHPEDC----KADIYVTGPNKCLGAPPG--LTMMGVSERA--------WAKMKANPLA 223 (392)
T ss_dssp HHTTCEEEEECTTTBT---TBSCCGGGG----TCSEEEECSSSTTCCCSC--CEEEEECHHH--------HHHHHTCTTS
T ss_pred HHcCCeEEEEcccccC---Ccccccccc----cceEEEecCcccccCCCc--eeEEEECHHH--------HHHhhhccCC
Confidence 9999999999999742 112222222 2348899999965 4455 5999998877 3333211
Q ss_pred -----------------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----Cc
Q 036024 151 -----------------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NA 209 (272)
Q Consensus 151 -----------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~ 209 (272)
......+.+...+.++.++++......+++.+++++++++++.+.|+++|+++..+. .+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 303 (392)
T 2z9v_A 224 PRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASP 303 (392)
T ss_dssp CCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCT
T ss_pred CCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCC
Confidence 112233455555555555555222122678899999999999999998888877632 46
Q ss_pred eEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHHh
Q 036024 210 PYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEAL 271 (272)
Q Consensus 210 ~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~~ 271 (272)
.++++.++ +.+..++...|.+++||.+.+|..+. ..+++|+++ ..+++++++++++|+++
T Consensus 304 ~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~--~~~~lRi~~~~~~~~~~~i~~~~~~l~~~ 367 (392)
T 2z9v_A 304 TTTAVRTPDGVDEKALRQAARARYGVVFSSGRGET--LGKLTRIGHMGPTAQPIYAIAALTALGGA 367 (392)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred ceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCC--CCCeEEEeCcccccCHHHHHHHHHHHHHH
Confidence 78889986 55667777777776799999987543 368999995 46999999999999875
No 97
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.94 E-value=2.8e-26 Score=198.81 Aligned_cols=245 Identities=14% Similarity=0.125 Sum_probs=177.8
Q ss_pred cccccccCcc-c--chHHhcccc-eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAG-D--LEDEVGKYC-NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~-~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+ . +...++..| +++.+|.+.+ +.+|++.+ ++++++++++|+||||.+.+ +++|+++
T Consensus 89 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l 163 (411)
T 3nnk_A 89 DKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWG--EVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEI 163 (411)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHH
Confidence 5666666533 3 666777888 9999998654 34443331 38999999999999999988 8899999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh--
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII-- 151 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-- 151 (272)
|+++|+++|+|+++..... +...... +..+++.|++|.++ ++.++|+++++++. .+.+....
T Consensus 164 ~~~~~~~li~Dea~~~~~~---~~~~~~~----~~d~~~~s~~K~l~-~~~g~g~~~~~~~~--------~~~~~~~~~~ 227 (411)
T 3nnk_A 164 CRRYDALFYTDATASLGGN---PLETDVW----GLDAVSAGMQKCLG-GPSGTSPITLSARM--------EEAIRRRKCV 227 (411)
T ss_dssp HHHHTCEEEEECTTTBTTB---CCCTTTT----TCSEEECCSTTTTC-CCSSEEEEEECHHH--------HHHHHTTCCC
T ss_pred HHHcCCEEEEECCcccCCc---ccchhcc----CCcEEEecCccccC-CCCceEEEEECHHH--------HHHHhhcccc
Confidence 9999999999999874211 1122111 23489999999854 33458999998877 33333221
Q ss_pred ----------------------------------hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024 152 ----------------------------------CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 152 ----------------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
.....+.+...+.++.+.+.......+++.+++++++++++.+.|+
T Consensus 228 ~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~ 307 (411)
T 3nnk_A 228 EEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQ 307 (411)
T ss_dssp CGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 1122345667776666666533333378899999999999999999
Q ss_pred hCCCeEecCCC---ceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-c--CCHHHHHHHHHHHHH
Q 036024 198 SLGIKVYGGIN---APYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-F--GHRESILEASRRLEA 270 (272)
Q Consensus 198 ~~g~~~~~~~~---~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~--~~~~~i~~~l~~l~~ 270 (272)
++|+++..+.+ +.++++.++ +.+..++...|++++||.+.+|. +....+++|+++ . .+++++++++++|++
T Consensus 308 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~--~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~ 385 (411)
T 3nnk_A 308 AMGLETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSF--GPLHGKVWRIGTMGYNARKDCVMTTLSALEA 385 (411)
T ss_dssp HTTCCBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECC--GGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HcCCEeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCcc--CCCCCCEEEEeCccCcCCHHHHHHHHHHHHH
Confidence 99988876543 678889987 55677788888887899999874 333467999997 3 379999999999987
Q ss_pred h
Q 036024 271 L 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 386 ~ 386 (411)
T 3nnk_A 386 V 386 (411)
T ss_dssp H
T ss_pred H
Confidence 6
No 98
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=5.5e-26 Score=195.74 Aligned_cols=251 Identities=16% Similarity=0.016 Sum_probs=177.2
Q ss_pred ccccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 3 IDSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 3 ~d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
-|.|++..+.+. +...++..| +++.+|.+++ +.+|++.+ + +++++++++|+||||.+.+ +++|.++|
T Consensus 123 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 197 (397)
T 3f9t_A 123 HPKIIVPITAHFSFEKGREMMDLEYIYAPIKED--YTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEELSKIA 197 (397)
T ss_dssp SCEEEEETTCCTHHHHHHHHHTCEEEEECBCTT--SSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHHHHHHH
T ss_pred CeEEEECCcchhHHHHHHHHcCceeEEEeeCCC--CcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHHHHHHH
Confidence 367777776666 778888889 9999999765 44443331 4 7899999999999999987 88899999
Q ss_pred HHcCCEEEEcccCCccccCCCCC--C------ccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPR--S------IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND 146 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~--~------~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~ 146 (272)
+++|+++|+||+|..+..+.... . ..... . +..+++.|++|.++ +|.|+|+++++++.+.+.+......
T Consensus 198 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~ 274 (397)
T 3f9t_A 198 KENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFS-L-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPY 274 (397)
T ss_dssp HHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGG-G-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTT
T ss_pred HHhCCeEEEEccccchhhhhccccccccccccccccc-c-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCcc
Confidence 99999999999998755432111 0 11111 1 33488999999885 7789999999877642221111000
Q ss_pred HHhhhh----hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChH
Q 036024 147 FNRIIC----TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSW 222 (272)
Q Consensus 147 ~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~ 222 (272)
+..... .+..+.+..++.++.+.+. ..+.++..++++++++++.+.|+++|+.+..+..+.++++.++. ..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--~~ 349 (397)
T 3f9t_A 275 LTETRQATILGTRVGFGGACTYAVLRYLG---REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDED--YK 349 (397)
T ss_dssp SSSSEECSSCSSCCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTT--HH
T ss_pred ccCCCccccccccccchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCC--HH
Confidence 000000 1111234455555555543 34557888899999999999999998887666678888888874 55
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
++...|.++ ||.+.++.. ++++|+++. .+++++++++++|++++
T Consensus 350 ~~~~~l~~~-gi~v~~~~~-----~~~~Ri~~~~~~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 350 EVCKKLRDR-GIYVSVCNC-----VKALRIVVMPHIKREHIDNFIEILNSIK 395 (397)
T ss_dssp HHHHHHHHT-TCBCEECSS-----SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhC-CeEEeccCC-----CCEEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 666666666 999998763 479999975 58999999999999875
No 99
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=9.4e-26 Score=195.82 Aligned_cols=247 Identities=17% Similarity=0.185 Sum_probs=176.5
Q ss_pred cccccccCc-cc--chHHhcccc-eeEEeecCCCCCcccC-CCC-C--CCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQA-GD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~-~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+. +. +...++..| +++.+|.+.++.+.++ +++ . ++++++++++|+||||.+++ +++|.++|+
T Consensus 87 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~ 163 (416)
T 3isl_A 87 DDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACR 163 (416)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHH
T ss_pred CEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHH
Confidence 556666554 33 556677788 9999999866433333 222 1 47899999999999999998 889999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh-----
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI----- 150 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~----- 150 (272)
++|+++|+|++|+.... +..+... +..+++.|++|.++ ++.++|+++++++.. +.+...
T Consensus 164 ~~~~~li~D~a~~~~~~---~~~~~~~----~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~--------~~~~~~~~~~~ 227 (416)
T 3isl_A 164 TEDALFIVDAVATIGGC---EVKVDEW----KIDAAIGGTQKCLS-VPSGMAPITYNERVA--------DVIAARKKVER 227 (416)
T ss_dssp HTTCEEEEECTTTTTTS---CCCTTTT----TCSEEECCSSSTTC-CCSSEEEEEECHHHH--------HHHHTC-----
T ss_pred HcCCEEEEECCccccCC---Ccchhhc----CCCEEEecCccccC-CCCCeEEEEECHHHH--------HHhhccccccc
Confidence 99999999999874221 1122221 23489999999753 334589999988773 333211
Q ss_pred ---------------------------------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024 151 ---------------------------------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 151 ---------------------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
......+.+...+.++.+.+.......+++.+++++++++++.+.|+
T Consensus 228 Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~ 307 (416)
T 3isl_A 228 GIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIK 307 (416)
T ss_dssp -------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 11123345667776666666532222378999999999999999999
Q ss_pred hCCCeEecCCC---ceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHH-HHHHHHHHHH
Q 036024 198 SLGIKVYGGIN---APYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRES-ILEASRRLEA 270 (272)
Q Consensus 198 ~~g~~~~~~~~---~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~-i~~~l~~l~~ 270 (272)
+.|+++..+.+ +.++++.++ +.+..++...|.+++||.+.+|.. +...+++|+++. .++++ +++++++|++
T Consensus 308 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~--~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~ 385 (416)
T 3isl_A 308 AMGLRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFG--PLAGKIWRIGTMGYSCRKENVLFVLAGLEA 385 (416)
T ss_dssp HTTCCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCS--TTTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HcCCEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCC--CCCCCEEEEecccCCCcHHHHHHHHHHHHH
Confidence 99988877643 578888986 556778888887777999998873 344689999972 35555 9999999987
Q ss_pred h
Q 036024 271 L 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 386 ~ 386 (416)
T 3isl_A 386 V 386 (416)
T ss_dssp H
T ss_pred H
Confidence 5
No 100
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.94 E-value=1e-25 Score=195.76 Aligned_cols=245 Identities=18% Similarity=0.217 Sum_probs=171.7
Q ss_pred cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..+.+. |...++..| +++.+|.+. ++.+|++. .+++++|++++|+||||.+++ +++|.+
T Consensus 119 d~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~ 193 (420)
T 1t3i_A 119 DEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE--QESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNP---AEEIAQ 193 (420)
T ss_dssp CEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT--TSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHH
T ss_pred CEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC--CCCcCHHHHHHhhCCCceEEEEeCCcccccCcCC---HHHHHH
Confidence 55666665444 344556678 999999874 34455333 257899999999999999999 899999
Q ss_pred HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
+|+++|+++|+|++|..+.. +..+..+ +..+++.|+||.+|.+| +||+++++++ .+.+.....
T Consensus 194 l~~~~~~~li~D~a~~~~~~---~~~~~~~----~~di~~~s~sK~~~~~g--~G~~~~~~~~--------~~~~~~~~~ 256 (420)
T 1t3i_A 194 LAHQAGAKVLVDACQSAPHY---PLDVQLI----DCDWLVASGHKMCAPTG--IGFLYGKEEI--------LEAMPPFFG 256 (420)
T ss_dssp HHHHTTCEEEEECTTTTTTS---CCCHHHH----TCSEEEEEGGGTTSCTT--CEEEEECHHH--------HHHSCCCSC
T ss_pred HHHHcCCEEEEEhhhccCCc---cCchhhc----CCCEEEEehhhhcCCCc--eEEEEEchHH--------HhhcCceec
Confidence 99999999999999985332 1123333 23489999999888767 8999998877 333322211
Q ss_pred --------------------hccCCcchHHHHHHHH-hcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC---
Q 036024 153 --------------------TCFNGASNIAQAGGLA-CLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI--- 207 (272)
Q Consensus 153 --------------------~~~~~~~~~~~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--- 207 (272)
....+++.+.+.++.. .++.....++++++++++++++++.+.|+++ |+++..+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 336 (420)
T 1t3i_A 257 GGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKH 336 (420)
T ss_dssp STTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGG
T ss_pred CCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccc
Confidence 0112345555554443 3432222346788899999999999999998 88887764
Q ss_pred --CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC-----C-CCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 208 --NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG-----G-EEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 208 --~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-----~-~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
.+.++++.+++.+..++.. .++++||.+.+|..|... + .+++|+++. .+++++++++++|+++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~-~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~ 409 (420)
T 1t3i_A 337 GDRAALASFNVAGLHASDVAT-MVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT 409 (420)
T ss_dssp SCBCSEEEEEETTBCHHHHHH-HHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cccCCEEEEEECCCCHHHHHH-HHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence 2566666787545556554 455669999999765321 2 678999985 4899999999998875
No 101
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.94 E-value=6.3e-26 Score=195.54 Aligned_cols=244 Identities=14% Similarity=0.151 Sum_probs=173.8
Q ss_pred cccccccCcc-cc--hHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAG-DL--EDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~-~~--~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+ .+ ...++..| +++.+|++++ +.+|++.+ + ++++|++++|+||||.+++ +++|.++
T Consensus 95 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~~ 169 (393)
T 2huf_A 95 DVILIGHTGHWGDRSADMATRYGADVRVVKSKVG--QSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQG---LEGVGAL 169 (393)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHH
T ss_pred CEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCC--CCCCHHHHHHHHhccCCcEEEEEccCCCccccCC---HHHHHHH
Confidence 5566666533 32 23445578 9999998754 34453331 4 7899999999999999998 8899999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhhh-
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRII- 151 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~- 151 (272)
|+++|+++|+|++|... ..+..+.. .+..+++.|+||.+ |.+|+ ||++++++. .+.+....
T Consensus 170 ~~~~~~~li~D~a~~~~---~~~~~~~~----~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~--------~~~~~~~~~ 232 (393)
T 2huf_A 170 CHQHNCLLIVDTVASLG---GAPMFMDR----WEIDAMYTGSQKVLGAPPGI--TPVSFSHRA--------VERYKRRNT 232 (393)
T ss_dssp HHHTTCEEEEECTTTBT---TBCCCTTT----TTCSEEECCSSSTTCCCSSC--EEEEECHHH--------HHHHHTCSS
T ss_pred HHHcCCEEEEEcccccC---CCCcchhh----cCccEEEECCCcccccCCCe--EEEEECHHH--------HHHHhhcCC
Confidence 99999999999998642 11122211 23458999999974 56775 999998776 33333220
Q ss_pred ----------------------hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC--
Q 036024 152 ----------------------CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-- 207 (272)
Q Consensus 152 ----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-- 207 (272)
.....+++...+.++.++++......+++.+++++++++++.+.|+++|+++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 312 (393)
T 2huf_A 233 KVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKD 312 (393)
T ss_dssp CCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGG
T ss_pred CCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccc
Confidence 11123456666666665665322234688889999999999999998888877653
Q ss_pred -CceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-c--CCHHHHHHHHHHHHHh
Q 036024 208 -NAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-F--GHRESILEASRRLEAL 271 (272)
Q Consensus 208 -~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~--~~~~~i~~~l~~l~~~ 271 (272)
.+.++++.++ +.+..++...|++++||.+.+|..|. ..+++|+++ . .+++++++++++|+++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~--~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~ 379 (393)
T 2huf_A 313 RLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPT--AGQVFRIGLMGQNATTERVDRVLQVFQEA 379 (393)
T ss_dssp BCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccc--cCCEEEEEcccCcCCHHHHHHHHHHHHHH
Confidence 3458888887 55667777788777799999988653 367999998 4 3688899999999875
No 102
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.94 E-value=6.1e-26 Score=195.38 Aligned_cols=236 Identities=14% Similarity=0.161 Sum_probs=171.1
Q ss_pred hHHhcccc-eeEEeecCCCCCcccC-CCC--CC-CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TS-RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
...+...| +++.++++++..+.+| +++ .+ +++++++++||||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~g 190 (393)
T 3kgw_A 114 AEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVASLG 190 (393)
T ss_dssp HHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTTT
T ss_pred HHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCcccc
Confidence 55667788 9999999766433333 222 13 8999999999999999998 889999999999999999998732
Q ss_pred ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh------------------
Q 036024 91 VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC------------------ 152 (272)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 152 (272)
.....+.. .+..+++.|+||.++ ++..+||++++++. ++.+.....
T Consensus 191 ---~~~~~~~~----~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
T 3kgw_A 191 ---GVPIYMDQ----QGIDIMYSSSQKVLN-APPGISLISFNDKA--------KYKVYSRKTKPVSFYTDITYLAKLWGC 254 (393)
T ss_dssp ---TSCCCTTT----TTCCEEEEESSSTTC-CCSSCEEEEECHHH--------HHHHHTCSSCCSCSTTCHHHHHHHTTC
T ss_pred ---Ccccchhh----cCCCEEEecCccccc-CCCceeEEEECHHH--------HHHHhccCCCCCceeecHHHHHHhhhh
Confidence 11111111 123488889999774 33348999998887 344432111
Q ss_pred -----hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----CceEEEeecC-CCChH
Q 036024 153 -----TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAPYVWAHFP-GRKSW 222 (272)
Q Consensus 153 -----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~i~l~-~~~~~ 222 (272)
....+.+...+.++.+.+......++++.+++++++++++.+.|+++|+++..+. .+.++++.++ +.+..
T Consensus 255 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (393)
T 3kgw_A 255 EGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYNWR 334 (393)
T ss_dssp SSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBCHH
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCCHH
Confidence 1123456676766666665333345788999999999999999999988876432 2567788886 45667
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-c--CCHHHHHHHHHHHHHhC
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISG-F--GHRESILEASRRLEALF 272 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~--~~~~~i~~~l~~l~~~l 272 (272)
++...|++++||.+.+|..+. ..+++|+++ . .+++++++++++|++++
T Consensus 335 ~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l 385 (393)
T 3kgw_A 335 DIVSYVLDHFSIEISGGLGPT--EERVLRIGLLGYNATTENVDRVAEALREAL 385 (393)
T ss_dssp HHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCcccC--CCCEEEEEecccCCCHHHHHHHHHHHHHHH
Confidence 788888887799999987543 367999997 4 38999999999998763
No 103
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.94 E-value=3.6e-26 Score=197.27 Aligned_cols=245 Identities=13% Similarity=0.120 Sum_probs=176.4
Q ss_pred cccccccCccc-ch--HHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LE--DEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~--~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+. +. ..++..| +++.++.++ ++.+|++.+ + ++++|++++|+||||.+++ +++|+++
T Consensus 94 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l 168 (396)
T 2ch1_A 94 DRVLIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQI 168 (396)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHH
T ss_pred CeEEEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHH
Confidence 56777766555 43 3567778 999999875 344554432 3 7899999999999999999 8899999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh---
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI--- 150 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~--- 150 (272)
|+++|+++|+||+|.. +..+..+..+ +..+++.|++|.++ ++.++|+++++++.+ +.+...
T Consensus 169 ~~~~~~~li~Dea~~~---g~~~~~~~~~----~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~--------~~~~~~~~~ 232 (396)
T 2ch1_A 169 CHQHDCLLIVDAVASL---CGVPFYMDKW----EIDAVYTGAQKVLG-APPGITPISISPKAL--------DVIRNRRTK 232 (396)
T ss_dssp HHHTTCEEEEECTTTB---TTBCCCTTTT----TCCEEECCCC-CCC-CCSSCEEEEECHHHH--------HHHHTCSSC
T ss_pred HHHcCCEEEEEccccc---cCCccchhhc----CcCEEEEcCCcccc-CCCCeEEEEECHHHH--------HhhhhccCc
Confidence 9999999999999983 2212222222 12267789999775 334579999988662 222110
Q ss_pred --------------h------hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC--
Q 036024 151 --------------I------CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN-- 208 (272)
Q Consensus 151 --------------~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-- 208 (272)
. .....+.+..++.++.+++......++++.+++++++++++.+.|+++|+++..+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 312 (396)
T 2ch1_A 233 SKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRH 312 (396)
T ss_dssp CSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGG
T ss_pred ccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccc
Confidence 0 112344677788877777764333567889999999999999999988988877643
Q ss_pred --ceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-c--CCHHHHHHHHHHHHHh
Q 036024 209 --APYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-F--GHRESILEASRRLEAL 271 (272)
Q Consensus 209 --~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~--~~~~~i~~~l~~l~~~ 271 (272)
+.++++.++ +.+..++...|++++||.+.+|..+. ..+++|+++ . .+++++++++++|+++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~e~i~~~~~~l~~~ 379 (396)
T 2ch1_A 313 RLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPT--FGKAWRVGIMGECSTVQKIQFYLYGFKES 379 (396)
T ss_dssp BCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred cCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccc--CCCEEEEECCCCcCCHHHHHHHHHHHHHH
Confidence 247888886 55677788888777799999887442 367999997 2 3789999999999875
No 104
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.94 E-value=7.7e-27 Score=201.77 Aligned_cols=204 Identities=16% Similarity=0.165 Sum_probs=152.8
Q ss_pred CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++++|+||||. +++.+++++|+++|+++|+++|+||+|.++.+.+.+.++..+...++ ++ |+||.++ +
T Consensus 182 ~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d--~~--s~sK~~~-~ 256 (397)
T 2ord_A 182 EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPD--VL--TTAKGLG-G 256 (397)
T ss_dssp TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCS--EE--EECGGGG-T
T ss_pred cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCC--ee--eeccccC-C
Confidence 58899999999999999 99999999999999999999999999997665554333333332233 22 7899999 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--G 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g 200 (272)
|+|+||++++++.. . +.........+.+.+.+.++.++++.... ++.+++++++++++.+.|+++ +
T Consensus 257 G~r~G~~~~~~~~~--~-------l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 324 (397)
T 2ord_A 257 GVPIGAVIVNERAN--V-------LEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEE 324 (397)
T ss_dssp TSCCEEEEECSTTC--C-------CCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCeEEEEEchHhc--c-------cCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988763 1 11112233445788888888888764222 457788889999999988775 3
Q ss_pred CeE---ecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 201 IKV---YGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 201 ~~~---~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
+.. .. ..+.++|+.++. .+..++...|.+ +||.+.|+. ++++|++ +..+++++++++++|++++
T Consensus 325 ~~~~~~~~-~~g~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~------~~~iRis~~~~~~~e~i~~~~~~l~~~l 394 (397)
T 2ord_A 325 YDVVADVR-GMGLMIGIQFREEVSNREVATKCFE-NKLLVVPAG------NNTIRFLPPLTVEYGEIDLAVETLKKVL 394 (397)
T ss_dssp CTTEEEEE-EETTEEEEEECTTSCHHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCceEEEE-EEeEEEEEEECChHHHHHHHHHHHH-CCCEEccCC------CCEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence 332 22 356788888874 346667777766 599999873 5789999 4569999999999998763
No 105
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.94 E-value=2.9e-26 Score=195.33 Aligned_cols=233 Identities=16% Similarity=0.046 Sum_probs=156.0
Q ss_pred cccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC
Q 036024 20 GKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP 96 (272)
Q Consensus 20 ~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~ 96 (272)
...| ++++++.+ +..+.++ +++.++++++++++||||| |.+++.+++++|+++|++||+++|+|++|.........
T Consensus 109 ~~~g~~~~~v~~~-~~~~d~~~l~~~~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 187 (357)
T 3lws_A 109 ELHPIETILVGAA-DRLMTLDEIKALPDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE 187 (357)
T ss_dssp HHSSCEEEECSCT-TSCCCHHHHHTCCSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred hccCcEEEEecCC-CCCcCHHHHhcCcCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence 3346 77777742 2233333 4444569999999999998 99999999999999999999999999998621111111
Q ss_pred CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc--CCcchHHHHHHHHhccccc
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF--NGASNIAQAGGLACLSSEG 174 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~ 174 (272)
.+...+....+ +++.|+||.++.++. ||+++++++ ++.+........ .......+.++...+..
T Consensus 188 ~~~~~~~~~~d--~~~~s~sK~~~~~~g--g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 253 (357)
T 3lws_A 188 KTAAEIAGLFD--SIYISFYKGLGGIAG--AILAGPAAF--------CQTARIWKRRYGGDLISLYPYIVSADYYYEL-- 253 (357)
T ss_dssp CCHHHHHTTSS--EEEEESSSTTCCSSC--EEEEECHHH--------HHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--
T ss_pred CChHHHHhcCC--EEEEeccccCCCCce--EEEEcCHHH--------HHHHHHHHHHhcCCcccchHHHHHHHHHHHH--
Confidence 22322222233 447899999943432 999988877 555554443222 11223333333344432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cCCCceEEEeecCCC--C-hHHHHHHHHHhcCeEeeCCCCCCCCCCCe
Q 036024 175 LEAVHSVVDYYKENTKILIDTLASL-GIKVY-GGINAPYVWAHFPGR--K-SWDVFAEILEKTHITTVPGSGFGPGGEEY 249 (272)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~i~l~~~--~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~ 249 (272)
+ .+..+++.++++++.+.|+++ |+++. .+.+++++|+.++.. . ..++... ++++||.+.||..|. .+..+
T Consensus 254 --~-~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~v~~g~~~~-~~~~~ 328 (357)
T 3lws_A 254 --R-KDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQV-QEETGLGFVGYLVDK-DGYCS 328 (357)
T ss_dssp --H-TTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHH-HHHHCEESCSCCEEC-SSEEE
T ss_pred --H-HHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHH-HHhcCeEEecccccC-CCceE
Confidence 2 223345678889999999998 89884 567889999999753 2 3444444 455699999997665 34568
Q ss_pred EEEEcc-----CCHHHHHHHHHHHHHhC
Q 036024 250 IRISGF-----GHRESILEASRRLEALF 272 (272)
Q Consensus 250 ~R~s~~-----~~~~~i~~~l~~l~~~l 272 (272)
+|+++. .+++++++++++|++++
T Consensus 329 ~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 329 TEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp EEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred EEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 999863 47899999999998875
No 106
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.94 E-value=9.7e-26 Score=191.32 Aligned_cols=252 Identities=14% Similarity=0.111 Sum_probs=173.1
Q ss_pred cccccccC-ccc--chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQ-AGD--LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~-~~~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+ ++. +...++..| +++.+|.+++ +.+|++.+ + +++++++++|+||||.+++ +++|.++
T Consensus 75 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l 149 (353)
T 2yrr_A 75 GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPG--EPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGAL 149 (353)
T ss_dssp CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTT--SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHH
T ss_pred CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHH
Confidence 55666553 232 234456678 9999999754 34443331 3 7899999999999999998 7899999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCC--cch---HHHH
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSG--FPV---INDF 147 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~--~~~---~~~~ 147 (272)
|+++|+++|+|++|... ..+.++..+. ..+++.|++|.+ |.+| +||++++++.+.... ... ...+
T Consensus 150 ~~~~~~~li~D~a~~~~---~~~~~~~~~~----~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~ 220 (353)
T 2yrr_A 150 AKEAGALFFLDAVTTLG---MLPFSMRAMG----VDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARV 220 (353)
T ss_dssp HHHHTCEEEEECTTTTT---TSCCCHHHHT----CSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHH
T ss_pred HHHcCCeEEEEcCcccc---cccccccccC----ceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHH
Confidence 99999999999999632 1122333331 238889999965 4456 799999988742211 000 0000
Q ss_pred Hh-h-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC--CceEEEeecC-CCChH
Q 036024 148 NR-I-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI--NAPYVWAHFP-GRKSW 222 (272)
Q Consensus 148 ~~-~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~i~l~-~~~~~ 222 (272)
.. . ......+.+...+.++.+++.......+++.+++++++++++.+.|+++|+++..+. .+.++|+.++ +.+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (353)
T 2yrr_A 221 AEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGVDAD 300 (353)
T ss_dssp HHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTCCHH
T ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCCCHH
Confidence 01 0 122233466677666666665322233678899999999999999998898887654 5667788886 55666
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHH-HHHHHHHHhC
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESIL-EASRRLEALF 272 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~-~~l~~l~~~l 272 (272)
++...|.++ ||.+.+|..|.. ++++|+++ ..++++++ +++++|++++
T Consensus 301 ~~~~~l~~~-gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~~~l~~~l 350 (353)
T 2yrr_A 301 RLVRALYAE-GVAVAGGIGPTR--GQVLRLGLMGEGARREAYQAFLKALDRAL 350 (353)
T ss_dssp HHHHHHHHT-TEECEECCGGGT--TTCEEEECSGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CEEEeCCccccC--CCeEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 777777666 999999986643 57899997 35888888 9999998753
No 107
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.94 E-value=1.5e-25 Score=192.35 Aligned_cols=247 Identities=13% Similarity=0.055 Sum_probs=171.2
Q ss_pred cccccccCccc-chHHh---cccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEV---GKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~---~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+. +.... +..| +++.+|++++ +.+|++. .++++++++++|+||||.+++ +++|.++
T Consensus 89 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l 163 (382)
T 4eb5_A 89 KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKY--GEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISEV 163 (382)
T ss_dssp CEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTT--SCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred CEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCC--CccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HHHHHHH
Confidence 55666665443 44333 3468 9999999754 3444332 257899999999999999998 7899999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHhhhh
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRIIC 152 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~~~ 152 (272)
|+++|++ |+|++|.. +..+..+..+ +..++++|+||.+|.+| +||++++++. +... .........
T Consensus 164 ~~~~~~~-i~D~a~~~---g~~~~~~~~~----~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~----~~~~~~~~~ 229 (382)
T 4eb5_A 164 LAGKAAL-HIDATASV---GQIEVDVEKI----GADMLTISSNDIYGPKG--VGALWIRKEAKLQPV----ILGGGQENG 229 (382)
T ss_dssp HTTSSEE-EEECTTTB---TTBCCCHHHH----TCSEEEEETGGGTCCSS--CEEEEEETTCCCCCS----SCSSCTGGG
T ss_pred HHHCCCE-EEEcchhc---CCcccCcccc----CCCEEEeehHHhcCCCc--eEEEEEccccccCce----ecCCCcccc
Confidence 9999999 99999983 2112223222 23489999999988656 7999988764 2110 000000011
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC---ceEEEeecCCCChHHHHHHH
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN---APYVWAHFPGRKSWDVFAEI 228 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~l 228 (272)
....+++...+.++.+++.. ..+++++++++++++++++.+.|+++ |+++..+.+ +.++++.+++.+..++...|
T Consensus 230 ~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (382)
T 4eb5_A 230 LRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSL 308 (382)
T ss_dssp TSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTSCHHHHHHHH
T ss_pred ccCCCccHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCcCHHHHHHHH
Confidence 22334555666655555542 22356888999999999999999987 888876542 55788888765666777776
Q ss_pred HHhcCeEeeCCCCCCCC-----------------CCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 229 LEKTHITTVPGSGFGPG-----------------GEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~-----------------~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
.+ +||.+.+|..|.+. +.+++|+++. .+++++++++++|+++
T Consensus 309 ~~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (382)
T 4eb5_A 309 DM-AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV 369 (382)
T ss_dssp HH-HTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HH-CCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 54 59999999876532 2579999985 5899999999999875
No 108
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.94 E-value=3e-25 Score=190.94 Aligned_cols=250 Identities=14% Similarity=0.079 Sum_probs=170.8
Q ss_pred cccccccCccc-chHH----hcccc-eeEEeecCCCCCcccC---CCC--CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDE----VGKYC-NIEYLECGPGNNFFPD---LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~~~~~~~~~~~d---l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..+.+. +... ++..| +++.+|.+.+.++.+| +++ .++++++++++|+||||.+++ +++|.+
T Consensus 102 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~ 178 (390)
T 1elu_A 102 DEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLP---LAEIMA 178 (390)
T ss_dssp CEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCC---HHHHHH
T ss_pred CEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecC---HHHHHH
Confidence 56777666555 3322 35567 9999998742344444 322 267899999999999999999 889999
Q ss_pred HHH----HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024 73 FAR----NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148 (272)
Q Consensus 73 ~~~----~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~ 148 (272)
+|+ ++|+++|+|++|.... .+..+.. .+..++++|+||.++ +|.++||++++++.+........ .+.
T Consensus 179 l~~~~~~~~~~~li~Dea~~~g~---~~~~~~~----~~~d~~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~-g~~ 249 (390)
T 1elu_A 179 VCRRHQGNYPVRVLVDGAQSAGS---LPLDFSR----LEVDYYAFTGHKWFA-GPAGVGGLYIHGDCLGEINPTYV-GWR 249 (390)
T ss_dssp HHHHCCSSSCCEEEEECTTTBTT---BCCCTTT----SCCSEEEEESSSTTC-CCTTCEEEEECTTTGGGCCCCSC-CTT
T ss_pred HHhhhhhhcCcEEEEEcccccCC---cCCChhh----cCCCEEEcccccccc-CCCceEEEEECHHhHhhcCCccc-cCC
Confidence 999 9999999999998421 1112211 234589999999443 55669999999877432111000 000
Q ss_pred ---------------hhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC--CCc
Q 036024 149 ---------------RIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-GIKVYGG--INA 209 (272)
Q Consensus 149 ---------------~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~ 209 (272)
........+.+...+.++.+++..... .++++++++++++++++.+.|+++ |+++..+ ..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 329 (390)
T 1elu_A 250 SITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQA 329 (390)
T ss_dssp TEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSS
T ss_pred cccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccc
Confidence 001122334566666666565552222 247889999999999999999998 8888753 245
Q ss_pred eEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 210 PYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 210 ~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
.++++.++ +.+..++...|. ++||.+.+|. +++++|+++ ..+++++++++++|+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~-----~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 330 GLVSFTVDSPLGHRAIVQKLE-EQRIYLRTIA-----DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp SEEEEEECSSSCHHHHHHHHH-HTTEECEEET-----TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred cEEEEEcCCCCCHHHHHHHHH-HCCEEEEecC-----CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 56666885 445667777775 5599999876 357999996 46999999999999865
No 109
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.94 E-value=3.9e-26 Score=196.98 Aligned_cols=204 Identities=13% Similarity=0.121 Sum_probs=155.8
Q ss_pred CCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++++|+||||.+++.++ +++|+++|++||+++|+||+|.++...+......... ...++ .|+||.++ +
T Consensus 181 ~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~d~---~~~SK~l~-g 255 (392)
T 3ruy_A 181 PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDN-VTPDM---YILGKALG-G 255 (392)
T ss_dssp TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSE---EEECGGGG-T
T ss_pred cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccC-CCCCE---EEEchhhh-C
Confidence 68999999999999999996555 9999999999999999999998776655433332222 22222 26789986 5
Q ss_pred c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG- 200 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 200 (272)
| +|+||++++++. .+.+.........+.+.+++.++.++++... . ++.+++++++++++++.|++++
T Consensus 256 G~~~~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~--~~~~~~~~~~~~~l~~~L~~~~~ 324 (392)
T 3ruy_A 256 GVFPISCAAANRDI--------LGVFEPGSHGSTFGGNPLACAVSIAALEVLE-E--EKLTERSLQLGEKLVGQLKEIDN 324 (392)
T ss_dssp TTSCCEEEEECHHH--------HTTCCTTSSCCSSTTCHHHHHHHHHHHHHHH-H--TTHHHHHHHHHHHHHHHHTTCCC
T ss_pred ChhhhEEEEECHHH--------HhhhccCCcCCCCCCCHHHHHHHHHHHHHHH-h--hhHHHHHHHHHHHHHHHHHHhcC
Confidence 7 999999998877 4444444445556688899998888887422 2 6778899999999999999874
Q ss_pred --CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 201 --IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 201 --~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
+....+ .+.++++.++. +..++...|.+ +||.+.|+. .+++|++ +..+++++++++++|++++
T Consensus 325 ~~~~~~~~-~g~~~~~~~~~-~~~~l~~~l~~-~gi~v~~~~------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 325 PMITEVRG-KGLFIGIELNE-PARPYCEQLKA-AGLLCKETH------ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp TTEEEEEE-ETTEEEEEESS-CSHHHHHHHHT-TTEECCCBT------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCceEEEe-eeeEEEEEEcc-hHHHHHHHHHH-CCcEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 444444 46666677776 66677777764 599998865 6799999 5679999999999998864
No 110
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.94 E-value=2.5e-25 Score=192.77 Aligned_cols=237 Identities=15% Similarity=0.142 Sum_probs=164.7
Q ss_pred cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH-
Q 036024 4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN- 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~- 76 (272)
|.|++..|.+. +.. .++..| +++.++.+.-..+.-.+ .++++++++++|+||||.+++ +++|+++|++
T Consensus 102 d~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~t~~v~l~~p~NptG~v~~---l~~i~~la~~~ 176 (404)
T 1e5e_A 102 DHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHM--KPNTKIVYFETPANPTLKIID---MERVCKDAHSQ 176 (404)
T ss_dssp CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTS
T ss_pred CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhc--CCCCcEEEEECCCCCCCcccC---HHHHHHHHHhh
Confidence 56777776665 566 567788 99999886211111112 257999999999999999997 8999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHH-HHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVIN-DFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 154 (272)
+|+++|+|++|..+.+. .++ .+ ++.+++.|+||.++.+|+|+ ||++++++. +. .+.......
T Consensus 177 ~~~~li~De~~~~~~~~---~~~-~~----~~di~~~S~sK~~~~~g~ri~G~~~~~~~~--------~~~~l~~~~~~~ 240 (404)
T 1e5e_A 177 EGVLVIADNTFCSPMIT---NPV-DF----GVDVVVHSATKYINGHTDVVAGLICGKADL--------LQQIRMVGIKDI 240 (404)
T ss_dssp TTCEEEEECTTTCTTTC---CGG-GG----TCSEEEEETTTTTTCSSCCCCEEEEECHHH--------HHHHHHTCCCCC
T ss_pred cCCEEEEECCCchhhhC---Ccc-cc----CCEEEEEcCccccCCCCCCeEEEEEECHHH--------HHHHHHHHHHhC
Confidence 99999999999986643 122 22 35699999999999999998 999999887 44 565554443
Q ss_pred -cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------eEecCC---CceEEEee
Q 036024 155 -FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-I--------------KVYGGI---NAPYVWAH 215 (272)
Q Consensus 155 -~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~~~~---~~~~~~i~ 215 (272)
....+.+.+.++.+.++. ...+.++..++.+.+.+.+++.. + ++..++ .+.++.++
T Consensus 241 ~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~ 315 (404)
T 1e5e_A 241 TGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFI 315 (404)
T ss_dssp CCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEE
T ss_pred CCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence 344777888877777763 24455566777777777777652 2 122221 14444448
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCCCCCC-----------------------CC--CCeEEEEccCCHHHHHHHHHHHHH
Q 036024 216 FPGRKSWDVFAEILEKTHITTVPGSGFGP-----------------------GG--EEYIRISGFGHRESILEASRRLEA 270 (272)
Q Consensus 216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----------------------~~--~~~~R~s~~~~~~~i~~~l~~l~~ 270 (272)
+++ ..+...+++++.|| +.+|..|+. .+ ++++|+|+.. |+++++++.|++
T Consensus 316 ~~~--~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~--e~~~~li~~l~~ 390 (404)
T 1e5e_A 316 LKS--GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--EDADELIADFKQ 390 (404)
T ss_dssp ETT--HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHH
T ss_pred eCC--CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHH
Confidence 864 23446667888899 556665542 22 5899999876 677777777766
Q ss_pred h
Q 036024 271 L 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 391 a 391 (404)
T 1e5e_A 391 G 391 (404)
T ss_dssp H
T ss_pred H
Confidence 5
No 111
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.94 E-value=1.5e-25 Score=192.14 Aligned_cols=202 Identities=17% Similarity=0.157 Sum_probs=151.5
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++++|+||||.+ .+.+++++|.++|+++|+++|+||+|.++...+...++..+....+ ++ |+||.++ +
T Consensus 171 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d-~~---s~SK~~~-~ 245 (375)
T 2eh6_A 171 EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPD-VI---ALAKGLG-G 245 (375)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCS-EE---EECGGGG-T
T ss_pred CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCC-EE---EEccccc-C
Confidence 578999999999999999 5688899999999999999999999997654442233333321222 22 7889998 7
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
|+|+||+++++++. +.+.........+.+.+.+.++.++++.. ++..++++++++++.+.|++++..
T Consensus 246 g~~~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~~~ 312 (375)
T 2eh6_A 246 GVPIGAILAREEVA--------QSFTPGSHGSTFGGNPLACRAGTVVVDEV-----EKLLPHVREVGNYFKEKLKELGKG 312 (375)
T ss_dssp TSCCEEEEEEHHHH--------TTCCTTSCCCSSTTCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CCCeEEEEEcHHHH--------hhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999988763 33332222233456778888777766532 267788999999999999988654
Q ss_pred EecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 203 VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 203 ~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
... ..++++|+.++. +..++...|.+ +||.+.|+. .+++|+++ ..+++++++++++|+++|
T Consensus 313 ~~~-~~g~~~~~~~~~-~~~~~~~~l~~-~gi~~~~~~------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 313 KVK-GRGLMLGLELER-ECKDYVLKALE-KGLLINCTA------GKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp EEE-EETTEEEEECSS-CCHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred Cce-EEEEEEEEEEcC-cHHHHHHHHHH-CCCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 443 357899999975 45677777765 599998863 57899995 468999999999999875
No 112
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.94 E-value=6.7e-27 Score=200.06 Aligned_cols=240 Identities=13% Similarity=0.054 Sum_probs=169.3
Q ss_pred cccccccCccc-chHHhcccc-eeEEee--cCCCCCcccCCCC-----C-----CCceEEEEecCCCccccCCCHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLE--CGPGNNFFPDLKG-----T-----SRTDIIFFCSPNNPTGHAATQNQLEQ 69 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~--~~~~~~~~~dl~~-----~-----~~~~~i~~~~p~nptG~~~~~~~l~~ 69 (272)
|.|++..+.+. +...++..| +++.+| .+++ +.+|++. . ++++++++++|+||||.+++ +++
T Consensus 94 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~---~~~ 168 (371)
T 2e7j_A 94 AWVVMDENCHYSSYVAAERAGLNIALVPKTDYPD--YAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKK 168 (371)
T ss_dssp CEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTT--CCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHH
T ss_pred CEEEEccCcchHHHHHHHHcCCeEEEeecccCCC--CCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCC---HHH
Confidence 56677666554 667778888 999999 6544 4444332 1 57899999999999999998 699
Q ss_pred HHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024 70 LVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 70 l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
|.++|+++|+++|+|++|..+... .++..+. ..++++|+||.++ ++.|+||++++++.+... +..
T Consensus 169 i~~~~~~~~~~li~D~a~~~~~~~---~~~~~~~----~di~~~s~sK~~~-~~~~~G~~~~~~~~~~~~-------~~~ 233 (371)
T 2e7j_A 169 IAKVCSEYDVPLLVNGAYAIGRMP---VSLKEIG----ADFIVGSGHKSMA-ASGPIGVMGMKEEWAEIV-------LRR 233 (371)
T ss_dssp HHHHHHTTTCCEEEECTTTBTTBC---CCHHHHT----CSEEEEEHHHHSS-CCSSCEEEEECTTTTTTT-------TCB
T ss_pred HHHHHHHcCCeEEEECccccCCCC---CChhhcC----CCEEEecCCcCCC-CCCCcEEEEEechhhhhh-------ccc
Confidence 999999999999999999875432 2333332 2389999999998 445999999998773220 211
Q ss_pred hhh--hc-----cCCcchHHHHHHHHhcccccHHHHHHHHHHH--HHHHHHHHHHHHhCCCeEecCC--CceEEEeecCC
Q 036024 150 IIC--TC-----FNGASNIAQAGGLACLSSEGLEAVHSVVDYY--KENTKILIDTLASLGIKVYGGI--NAPYVWAHFPG 218 (272)
Q Consensus 150 ~~~--~~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~g~~~~~~~--~~~~~~i~l~~ 218 (272)
... .. ..+.+...+.++.+.++... . +..+++ +++++++.+.|+++|+++..+. .+.++|+.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~- 308 (371)
T 2e7j_A 234 SEKYKNKEVELLGCTARGATIITLMASFPHVR-E---RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE- 308 (371)
T ss_dssp CSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHH-H---HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECH-
T ss_pred cccCcccccccccCCcCHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECC-
Confidence 111 11 23345555554545544211 1 566777 8999999999998899888764 4778999987
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCC----CCCCeEE-EEcc---CCHHHHHHHHHHHHHh
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGP----GGEEYIR-ISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~~~R-~s~~---~~~~~i~~~l~~l~~~ 271 (272)
+..++...|. ++||.+.| ..+.. ..++++| +++. .+++++++++++|+++
T Consensus 309 -~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~ 366 (371)
T 2e7j_A 309 -VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEI 366 (371)
T ss_dssp -HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHH
Confidence 4455555555 66999988 43322 1257899 9986 6899999999999875
No 113
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.94 E-value=5.9e-25 Score=190.34 Aligned_cols=245 Identities=14% Similarity=0.126 Sum_probs=169.8
Q ss_pred cccccccCccc-chHHhcc----cc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGK----YC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~----~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++..+.+. +...+.. .| +++.++++++ ++.+|++. .+++++|++++|+||||.+++ +++|.+
T Consensus 114 d~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~ 189 (406)
T 3cai_A 114 YEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISKSTRLVAVNSASGTLGGVTD---LRAMTK 189 (406)
T ss_dssp CEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCC---CHHHHH
T ss_pred CEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCCCceEEEEeCCcCCccccCC---HHHHHH
Confidence 55666665444 3333332 57 9999998743 34455444 267899999999999999998 889999
Q ss_pred HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcccee-EEEecccccccCCcchHHHHHhhh
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLG-WTVVPEELLFSSGFPVINDFNRII 151 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G-~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
+|+++|+++|+|++|.... .+..+..+ +..+++.|+||.+| ++ +| |++++++.. +.+....
T Consensus 190 l~~~~~~~li~D~a~~~g~---~~~~~~~~----~~d~~~~s~~K~~g-~~--~G~~~~~~~~~~--------~~l~~~~ 251 (406)
T 3cai_A 190 LVHDVGALVVVDHSAAAPY---RLLDIRET----DADVVTVNAHAWGG-PP--IGAMVFRDPSVM--------NSFGSVS 251 (406)
T ss_dssp HHHHTTCEEEEECTTTTTT---CCCCHHHH----CCSEEEEEGGGGTS-CS--CEEEEESCHHHH--------HTSCCCC
T ss_pred HHHHcCCEEEEEcccccCC---CCCCchhc----CCCEEEeehhhhcC-CC--cCeEEEEehHHH--------hhcCCcc
Confidence 9999999999999997421 12223333 23488999999887 65 89 999988763 2222111
Q ss_pred ---------hhccCCcchHHHHHHHHhcc---ccc-----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC
Q 036024 152 ---------CTCFNGASNIAQAGGLACLS---SEG-----------LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI 207 (272)
Q Consensus 152 ---------~~~~~~~~~~~~~a~~~~l~---~~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 207 (272)
.....+.+...+.++.++++ ..+ .+++++++++++++++++.+.|+++ |+++..+.
T Consensus 252 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 331 (406)
T 3cai_A 252 TNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRP 331 (406)
T ss_dssp SCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCC
T ss_pred cCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCc
Confidence 11123355555544444443 111 0157889999999999999999987 88887653
Q ss_pred --CceEEEeecCCCChHHHHHHHHHhcCeEeeCCC------CCCC-CCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 208 --NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS------GFGP-GGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 208 --~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~------~~~~-~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
.+.++++.+++.+..++...|.+ +||.+.+|. .|+. .+.+++|+++.. +++++++++++|+++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~L~~-~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 332 EAQIPVVSFAVHKVPADRVVQRLAD-NGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp SSBCSEEEEEETTBCHHHHHHHHHH-TTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred cccCCEEEEEECCcCHHHHHHHHHH-CCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 24478888876566667766654 599999987 3332 235789999754 899999999999875
No 114
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.93 E-value=3.4e-25 Score=189.89 Aligned_cols=247 Identities=11% Similarity=0.054 Sum_probs=170.3
Q ss_pred cccccccC-ccc--chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQ-AGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~-~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+ ++. +...+...| +++.++.+.+..+.+| +++ .++++++++++|+||||.+++ +++|+++|++
T Consensus 96 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 172 (376)
T 3f0h_A 96 DKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIGEFCKK 172 (376)
T ss_dssp CCEEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC---HHHHHHHHHH
T ss_pred CeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecC---HHHHHHHHHH
Confidence 56666653 333 224566678 9999998765444444 333 368899999999999999999 9999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhh----
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRII---- 151 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~---- 151 (272)
+|+++|+|+++..+... ..+... +..+++.|+||.++ .+| +|+++++++. .+.+....
T Consensus 173 ~~~~li~D~~~~~~~~~---~~~~~~----~~d~~~~s~~K~l~~~~G--~g~~~~~~~~--------~~~~~~~~~~~~ 235 (376)
T 3f0h_A 173 NNMFFVCDCVSAFLADP---FNMNEC----GADVMITGSQKVLACPPG--ISVIVLAPRG--------VERVEKSKVRTM 235 (376)
T ss_dssp TTCEEEEECTTTTTTSC---CCHHHH----TCSEEEEETTTTTCCCSS--CEEEEECHHH--------HHHHHTCCCCCS
T ss_pred cCCEEEEEcCccccCcc---cccccc----CccEEEecCcccccCCCc--eEEEEECHHH--------HHHhhcCCCCce
Confidence 99999999998853321 122222 12388999999998 556 6888888877 33332210
Q ss_pred -------------hhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-EEEeec
Q 036024 152 -------------CTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-YVWAHF 216 (272)
Q Consensus 152 -------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~i~l 216 (272)
..+..+++...+.++.+.+...... .+++.+++++++++++.+.|+++|+.+..+.... ++.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 315 (376)
T 3f0h_A 236 YFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHP 315 (376)
T ss_dssp TTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEE
T ss_pred eecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeC
Confidence 1123345554444454544422222 4688899999999999999999888776643332 233334
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
++.+..++...|.+++||.+.+|. +..+.+++|+++ ..+++++++++++|++++
T Consensus 316 ~~~~~~~l~~~l~~~~gi~v~~g~--~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l 371 (376)
T 3f0h_A 316 TTANAYDIFLKLKDEYGIWICPNG--GEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQ 371 (376)
T ss_dssp SSSCHHHHHHHHHHHSSEECEECC--GGGTTTCEEEECCSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCEEEecCc--cccCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 455677788888877799999984 333468999997 458999999999998763
No 115
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.93 E-value=2.4e-25 Score=190.74 Aligned_cols=250 Identities=12% Similarity=0.068 Sum_probs=166.9
Q ss_pred cccccccCccc-chHH---hcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDE---VGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~---~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +... ++..| +++.+|.+++..+.++ +++ .++++++++++|+||||.+++ +++|.++|+
T Consensus 89 d~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~ 165 (382)
T 4hvk_A 89 KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISEVLA 165 (382)
T ss_dssp CEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHS
T ss_pred CEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---HHHHHHHHH
Confidence 45666554433 4443 33357 9999999855333333 222 267899999999999999988 789999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
++|+ +|+|++|..... +..+... +..++++|+||.+|.+| +|+++++++... ...............
T Consensus 166 ~~~~-li~D~a~~~~~~---~~~~~~~----~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~---~~~~~~~~~~~~~~~ 232 (382)
T 4hvk_A 166 GKAA-LHIDATASVGQI---EVDVEKI----GADMLTISSNDIYGPKG--VGALWIRKEAKL---QPVILGGGQENGLRS 232 (382)
T ss_dssp SSSE-EEEECTTTBTTB---CCCHHHH----TCSEEEEESGGGTSCTT--CEEEEEETTCCC---CCSSCSSCTGGGTSC
T ss_pred HcCE-EEEEhHHhcCCC---CCCchhc----CCCEEEEeHHHhcCCCc--eEEEEEcCccCc---CcccccCCCcCcccc
Confidence 9999 999999874211 1222222 22389999999887556 788887765411 111100001112223
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC---ceEEEeecCCCChHHHHHHHHHh
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN---APYVWAHFPGRKSWDVFAEILEK 231 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~ 231 (272)
.+.+...+.++.+.+. ...+++++.+++++++++++.+.|+++ |+++..+.. +.++++.+++.+..++...|. +
T Consensus 233 ~~~~~~~~~~~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 310 (382)
T 4hvk_A 233 GSENVPSIVGFGKAAE-ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLD-M 310 (382)
T ss_dssp SCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTCCHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCCCHHHHHHHHH-H
Confidence 3456666666666655 223577889999999999999999987 888876543 347777777666667666665 4
Q ss_pred cCeEeeCCCCCCCCC-----------------CCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 232 THITTVPGSGFGPGG-----------------EEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~-----------------~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
+||.+.+|+.|+... .+++|+++. .+++++++++++|+++
T Consensus 311 ~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~ 369 (382)
T 4hvk_A 311 AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV 369 (382)
T ss_dssp TTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 599999998887543 588999975 4899999999999875
No 116
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.93 E-value=9.1e-26 Score=195.82 Aligned_cols=245 Identities=15% Similarity=0.042 Sum_probs=172.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCC---CCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT---SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+++. +...+...| ++++++... ++ +++. .+++++++++|+||||.+++ +++|+++|+++
T Consensus 144 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~d-----~~~le~~l~~~~~~~vi~~~~~nptG~~~~---l~~l~~la~~~ 215 (409)
T 3kki_A 144 TNVYIDFFAHMSLWEGARYANAQAHPFMHNN-----CDHLRMLIQRHGPGIIVVDSIYSTLGTIAP---LAELVNISKEF 215 (409)
T ss_dssp CEEEEETTSCHHHHHHHHHTTCEEEEECTTC-----HHHHHHHHHHHCSCEEEEESBCTTTCCBCC---HHHHHHHHHHH
T ss_pred CEEEECCCcCHHHHHHHHHcCCeEEEecCCC-----HHHHHHHHHhcCCeEEEECCCCCCCCCcCC---HHHHHHHHHHc
Confidence 55666666655 556666677 888776521 11 2221 35799999999999999998 89999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccc-cCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh--hhc
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYE-IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII--CTC 154 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 154 (272)
|+++|+||+|.++.++........ .....+..++++|+||.+|.+| ||++++++.. +.+.... ...
T Consensus 216 ~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~~~~--------~~~~~~~~~~~~ 284 (409)
T 3kki_A 216 GCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNNEVN--------RCVPFISYPAIF 284 (409)
T ss_dssp TCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESSSGG--------GTHHHHCHHHHH
T ss_pred CCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECHHHH--------HHHHHhCcCccc
Confidence 999999999987555432222222 2222234489999999998554 9999988873 3333221 112
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-ChHHHHHHHHHhcC
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTH 233 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~g 233 (272)
..+.+...+.++.+.++.. +..++.+++++++++++.+.|+++|+++.+ .++++|+.++.. ...++...|+++ |
T Consensus 285 ~~~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~-G 359 (409)
T 3kki_A 285 SSTLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQLGLTIRS--ESQIIGLETGDERNTEKVRDYLESN-G 359 (409)
T ss_dssp SBCCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTTTCCCCC--SSSEEEEEEESHHHHHHHHHHHHHT-T
T ss_pred cCCCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCccCC--CCCEEEEEeCCHHHHHHHHHHHHHC-C
Confidence 2235555666666665522 122678889999999999999999887763 688899988742 344567777766 9
Q ss_pred eEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 234 ITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 234 i~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
|.+.|+..+. +.+.+++|+++. .+++++++++++|++++
T Consensus 360 v~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l 401 (409)
T 3kki_A 360 VFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAV 401 (409)
T ss_dssp EECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred ceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 9998865442 445789999974 58999999999998763
No 117
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.93 E-value=1.9e-25 Score=193.46 Aligned_cols=205 Identities=13% Similarity=0.100 Sum_probs=155.4
Q ss_pred CCceEEEEecCCCccccCC--CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA--TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++++++++ |+||||.++ +.+++++|+++|++||+++|+||+|.++.+.+.+......... .+++ |+||.++
T Consensus 182 ~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-~d~~---t~sK~~~- 255 (406)
T 4adb_A 182 DSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVT-PDLL---TTAKALG- 255 (406)
T ss_dssp TTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCC-CSEE---EECGGGG-
T ss_pred CCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCC-CCEE---Eechhhc-
Confidence 678888888 999999998 9999999999999999999999999977665544333333222 2323 6799999
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG- 200 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 200 (272)
+|+|+||++++++. .+.+.........+.+.+.+.++.+.++.... ++..++++++++++.+.|++++
T Consensus 256 ~G~r~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 324 (406)
T 4adb_A 256 GGFPVGALLATEEC--------ARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINH 324 (406)
T ss_dssp TTSCCEEEEECHHH--------HHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcHHH--------HhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998887 44554444455566888999888888864322 5677888889999998888752
Q ss_pred ---CeEecCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 201 ---IKVYGGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 201 ---~~~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
........+.++|+.++.. ...++...+.++ ||.+.|+. .+++|++ +..+++++++++++|++++
T Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~------~~~iRi~~~~~~~~e~i~~~~~~l~~~l 397 (406)
T 4adb_A 325 RYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKA-GVMVLIAG------GNVVRFAPALNVSEEEVTTGLDRFAAAC 397 (406)
T ss_dssp HHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHHT-TEECEESS------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHC-CcEEeecC------CCeEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 1111222477889998753 466777777766 99998864 6799995 5679999999999998763
No 118
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.93 E-value=2.8e-25 Score=189.37 Aligned_cols=233 Identities=14% Similarity=0.002 Sum_probs=156.7
Q ss_pred ccc-eeEEeecCCCCCcccC-CCC-CCCceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC
Q 036024 21 KYC-NIEYLECGPGNNFFPD-LKG-TSRTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP 96 (272)
Q Consensus 21 ~~g-~~~~~~~~~~~~~~~d-l~~-~~~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~ 96 (272)
..| ++++++.+ +..+.++ +++ .++++++++++||||| |.+++.+++++|+++|+++|+++|+|++|..+......
T Consensus 111 ~~g~~~~~v~~~-~~~~d~~~l~~~~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~ 189 (359)
T 3pj0_A 111 LQQITPLLLGTA-NQLLTIDDIKSLREPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQ 189 (359)
T ss_dssp HHCCEEEECSCT-TSCCCHHHHHTCSSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHT
T ss_pred hcCceEEecCCc-CCCcCHHHHHhccCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhC
Confidence 356 88888763 2233333 332 3689999999999998 79999999999999999999999999998754321111
Q ss_pred CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhccccc
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEG 174 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~ 174 (272)
.+...+....+ +++.|+||.++.++ . ||++.++++ ++.+......... ........++...+..
T Consensus 190 ~~~~~~~~~~d--~~~~s~sK~~~~~~-g-g~~~~~~~l--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-- 255 (359)
T 3pj0_A 190 KSAEEICALFD--SVYVSFYKGIGGIA-G-AILAGNDDF--------VQEAKIWKRRYGGDLISLYPYILSADYYFEK-- 255 (359)
T ss_dssp CCHHHHHTTCS--EEEEESSSTTCCSS-C-EEEEECHHH--------HHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--
T ss_pred CCHHHhhccCC--EEEEeccccCCCcc-e-EEEECCHHH--------HHHHHHHHHHhCCCcchhHHHHHHHHHHHHH--
Confidence 22222221223 55668999887553 2 777778777 5555544322221 1222223333333321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCe
Q 036024 175 LEAVHSVVDYYKENTKILIDTLASL-GIKVY-GGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEY 249 (272)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~ 249 (272)
+ .+..++++++++++.+.|+++ |+++. .+..++++|+.++.. +..++... +.++||.+.||..|+..+.++
T Consensus 256 --~-~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~GV~v~~g~~~~~~~~~~ 331 (359)
T 3pj0_A 256 --R-IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKI-QDETGVGISGYLQEKSADVCA 331 (359)
T ss_dssp --H-GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHH-HHHHCEECCSCCEEEETTEEE
T ss_pred --H-HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHH-HHhcCcEecCCccccCCCceE
Confidence 1 234455788899999999998 89885 566788899988742 23344444 455699999998887656788
Q ss_pred EEEEcc-----CCHHHHHHHHHHHHHhC
Q 036024 250 IRISGF-----GHRESILEASRRLEALF 272 (272)
Q Consensus 250 ~R~s~~-----~~~~~i~~~l~~l~~~l 272 (272)
+|+++. .+.+++++++++|.++|
T Consensus 332 ~r~~i~~~~~~~~~e~l~~~l~~l~~~l 359 (359)
T 3pj0_A 332 FEVSVGDAFAEIPAKNLELVFRCLEKEL 359 (359)
T ss_dssp EEEECCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred EEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 999863 47899999999999875
No 119
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.93 E-value=9.7e-25 Score=188.98 Aligned_cols=247 Identities=18% Similarity=0.152 Sum_probs=171.0
Q ss_pred cccccccCccc-c---hHHhcccc-eeEEeecCCC-CCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHH
Q 036024 4 DSSVIVGQAGD-L---EDEVGKYC-NIEYLECGPG-NNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLV 71 (272)
Q Consensus 4 d~~~~~~~~~~-~---~~~~~~~g-~~~~~~~~~~-~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~ 71 (272)
|.|++..+.+. + ...++..| ++.+++.+.+ .++.+|++.+ ++++++++++|+|| ...+ +++|.
T Consensus 110 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~---l~~i~ 184 (407)
T 2dkj_A 110 DTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWD---FKAFR 184 (407)
T ss_dssp CEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHH
T ss_pred CEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCC---HHHHH
Confidence 55666665544 4 23445556 5555555322 2455664432 37899999999998 4555 89999
Q ss_pred HHHHHcCCEEEEcccCCc-cccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHh
Q 036024 72 EFARNNGSIIIFDSAYAA-YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNR 149 (272)
Q Consensus 72 ~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~ 149 (272)
++|+++|+++|+||+|.. +.+.+...+. +. ...++++|+||.+ +|.|+||++++ +++ .+.+..
T Consensus 185 ~l~~~~~~~li~Dea~~~g~~~~~~~~~~--~~---~~di~~~s~sK~l--~g~~~G~~~~~~~~~--------~~~l~~ 249 (407)
T 2dkj_A 185 EIADEVGAYLVVDMAHFAGLVAAGLHPNP--LP---YAHVVTSTTHKTL--RGPRGGLILSNDPEL--------GKRIDK 249 (407)
T ss_dssp HHHHHHTCEEEEECTTTHHHHHTTCSCCC--TT---TCSEEEEESSGGG--CCCSCEEEEESCHHH--------HHHHHH
T ss_pred HHHHHcCCEEEEEccccccccccCccCCc--cc---cccEEEEeccccC--CCCCceEEEECCHHH--------HHHHHh
Confidence 999999999999999997 4444322221 11 1358899999955 57889999998 566 455555
Q ss_pred hhhhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCC--CChHHHH
Q 036024 150 IICTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPG--RKSWDVF 225 (272)
Q Consensus 150 ~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~--~~~~~~~ 225 (272)
...... .+.+.....++.+++......++++.+++++++++++.+.|+++|+++.. +..++++|+.++. .+..++.
T Consensus 250 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (407)
T 2dkj_A 250 LIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAE 329 (407)
T ss_dssp HHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHH
T ss_pred hhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCCceEEEEECcccCCCHHHHH
Confidence 443322 23344334355555553223567889999999999999999998998875 3578899999973 3455555
Q ss_pred HHHHHhcCeEeeCCCCC----CCCCCCeEEEEcc------CCHHHHHHHHHHHHHh
Q 036024 226 AEILEKTHITTVPGSGF----GPGGEEYIRISGF------GHRESILEASRRLEAL 271 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~----~~~~~~~~R~s~~------~~~~~i~~~l~~l~~~ 271 (272)
..| .++||.+.+|..| .+..++++|+++. .+++++++++++|+++
T Consensus 330 ~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 384 (407)
T 2dkj_A 330 ERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRA 384 (407)
T ss_dssp HHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred HHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHH
Confidence 555 5669999998764 2334678999973 6899999999999875
No 120
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.93 E-value=8.3e-25 Score=190.38 Aligned_cols=252 Identities=13% Similarity=0.084 Sum_probs=169.5
Q ss_pred cccccccCccc-chHHh---cccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEV---GKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~---~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...+ ...| +++.+|.+++..+.++ +++ .++++++++++|+||||.+++ +++|+++|+
T Consensus 114 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~ 190 (423)
T 3lvm_A 114 KHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQD---IAAIGEMCR 190 (423)
T ss_dssp CEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHH
T ss_pred CEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccC---HHHHHHHHH
Confidence 55666655444 55555 4448 9999998764333333 222 267899999999999999999 888999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
++|+++|+||+|+.... +..+... +..++++|+||.+|.+| +||++++++......+ .............
T Consensus 191 ~~~~~li~Dea~~~~~~---~~~~~~~----~~di~~~s~sK~~g~~g--~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 260 (423)
T 3lvm_A 191 ARGIIYHVDATQSVGKL---PIDLSQL----KVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEA-QMHGGGHERGMRS 260 (423)
T ss_dssp HHTCEEEEECTTTTTTS---CCCTTTS----CCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCC-SSCSSCTTTTTCC
T ss_pred HcCCEEEEEhhhhcCCC---CcChhhc----CCCEEEechHHhcCCCC--eEEEEEeccccCCCCc-cccCCcccccccC
Confidence 99999999999875221 1122222 23489999999888666 8999998876432111 1000000001223
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC---ceEEEeecCCCChHHHHHHHHHh
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN---APYVWAHFPGRKSWDVFAEILEK 231 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~ 231 (272)
.+.+...+.++.+++. ...+++++.+++++++++++.+.|+++ |+.+..+.+ +.++++.+++.+..++...| .+
T Consensus 261 ~~~~~~~~~a~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~ 338 (423)
T 3lvm_A 261 GTLPVHQIVGMGEAYR-IAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMAL-KD 338 (423)
T ss_dssp SCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSCHHHHHHHT-TT
T ss_pred CCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCCHHHHHHHH-hh
Confidence 3456666666656655 222347889999999999999999988 888887654 35666677765666666555 44
Q ss_pred cCeEeeCCCCCCCCC-----------------CCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 232 THITTVPGSGFGPGG-----------------EEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 232 ~gi~v~~g~~~~~~~-----------------~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
|.+.+|..|.+.. .+++|+++. .+++++++++++|++++
T Consensus 339 --i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~ 396 (423)
T 3lvm_A 339 --LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSI 396 (423)
T ss_dssp --EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred --heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 9999998876521 478999974 48899999999998753
No 121
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=2e-24 Score=185.55 Aligned_cols=251 Identities=12% Similarity=0.050 Sum_probs=171.4
Q ss_pred cccccc-cCccc-c-hHHhcccc-eeEEeec-CCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 4 DSSVIV-GQAGD-L-EDEVGKYC-NIEYLEC-GPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 4 d~~~~~-~~~~~-~-~~~~~~~g-~~~~~~~-~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|.|++. ++++. + ...++..| +++.++. +. ++.+|++.+ + +++++++++|+||||.+++ +++|++
T Consensus 87 d~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~ 161 (385)
T 2bkw_A 87 KNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKI--GESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQ 161 (385)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTTCEEEEECCSST--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHH
T ss_pred CeEEEEcCCcchHHHHHHHHHcCCceEEEecCCC--CCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcC---HHHHHH
Confidence 556555 44444 3 35566778 9999998 54 344553331 3 7899999999999999998 789999
Q ss_pred HHHHc--CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccc-cCCc-------
Q 036024 73 FARNN--GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLF-SSGF------- 141 (272)
Q Consensus 73 ~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~-~~~~------- 141 (272)
+|+++ |+++|+|++|.... .+..+..+ +..++++|+||.++ .+| +||++++++.+. ....
T Consensus 162 ~~~~~~~~~~li~D~a~~~~~---~~~~~~~~----~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~ 232 (385)
T 2bkw_A 162 AIKQTSPETFFVVDAVCSIGC---EEFEFDEW----GVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVH 232 (385)
T ss_dssp HHHHHCTTSEEEEECTTTTTT---SCCCTTTT----TCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCS
T ss_pred HHHhhCCCCEEEEECccccCC---cccccccc----CceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCC
Confidence 99999 99999999997421 11222222 23488999999664 566 599999887632 1100
Q ss_pred -------chHHHHHhhhhh---ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH-HhCCCeEecC----
Q 036024 142 -------PVINDFNRIICT---CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL-ASLGIKVYGG---- 206 (272)
Q Consensus 142 -------~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~g~~~~~~---- 206 (272)
+.......+... ...+.+...+.++.++++......+++.+++++++++++.+.| +++|+++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 312 (385)
T 2bkw_A 233 GYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSN 312 (385)
T ss_dssp CSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSST
T ss_pred ceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCccc
Confidence 000001111111 1234666776666666653222236788899999999999999 8888888753
Q ss_pred -CCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE-cc-----CCHHHHHHHHHHHHHhC
Q 036024 207 -INAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS-GF-----GHRESILEASRRLEALF 272 (272)
Q Consensus 207 -~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s-~~-----~~~~~i~~~l~~l~~~l 272 (272)
..++++|+.+++ ..++...|. ++||.+.+|..+. ...+++|++ +. .+++++++++++|++++
T Consensus 313 ~~~~~~~~~~~~~--~~~~~~~l~-~~gi~v~~g~~~~-~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~ 381 (385)
T 2bkw_A 313 MSAHGLTAVYVAD--PPDVIAFLK-SHGVVIAGGIHKD-IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLAL 381 (385)
T ss_dssp TBCSSCEEEECSC--HHHHHHHHH-HTTEECBCCCCTT-TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHT
T ss_pred ccCCceEEEecCC--HHHHHHHHH-HCCeEEeCCCCcc-cCCCEEEEEccccccccCCHHHHHHHHHHHHHHH
Confidence 247889999875 556666665 4599999987653 236789999 54 48999999999998864
No 122
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.92 E-value=3.1e-25 Score=193.29 Aligned_cols=205 Identities=14% Similarity=0.128 Sum_probs=145.0
Q ss_pred CCceEEEEe-cCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFC-SPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~-~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++++|+++ +++| || .+++.+++++|+++|+++|+++|+||+|.++.+.+....+... +. .+.+.||||.+|
T Consensus 198 ~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~---~~di~s~sK~~~- 271 (426)
T 1sff_A 198 EDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQM-GV---APDLTTFAKSIA- 271 (426)
T ss_dssp GGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGT-TS---CCSEEEECGGGG-
T ss_pred CceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhc-CC---CCCEEEEccccc-
Confidence 356777775 5678 99 8889999999999999999999999999987655432222222 11 123449999999
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-- 199 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 199 (272)
+|+|+||++++++++ +.+.......+.+.+.+++.++.++++.... .+..++++++++++++.|+++
T Consensus 272 ~GlriG~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 340 (426)
T 1sff_A 272 GGFPLAGVTGRAEVM--------DAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAE 340 (426)
T ss_dssp TSSCCEEEEEEHHHH--------TTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEcHHHH--------hhhccCCcCcCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence 599999999998773 3333222334455788888888877752221 234566777777777777653
Q ss_pred --C-CeEecCCCceEEEeecCC---------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHH
Q 036024 200 --G-IKVYGGINAPYVWAHFPG---------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEAS 265 (272)
Q Consensus 200 --g-~~~~~~~~~~~~~i~l~~---------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l 265 (272)
. +....+ .|+++|+.++. .+..++...|+++ ||.+.||..+ .+++|+++ ..+++++++++
T Consensus 341 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~----~~~iRi~~~~~~~~~~i~~~~ 414 (426)
T 1sff_A 341 KHPEIGDVRG-LGAMIAIELFEDGDHNKPDAKLTAEIVARARDK-GLILLSCGPY----YNVLRILVPLTIEDAQIRQGL 414 (426)
T ss_dssp TCTTEEEEEE-ETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHT-TEECEEESTT----SCEEEECCCTTCCHHHHHHHH
T ss_pred hCCCeEEEEE-EEEEEEEEEecCccccCCChHHHHHHHHHHHHC-CcEEecCCCC----CCEEEEECCccCCHHHHHHHH
Confidence 2 233334 37899999842 1245566666655 9999998764 57899996 56999999999
Q ss_pred HHHHHh
Q 036024 266 RRLEAL 271 (272)
Q Consensus 266 ~~l~~~ 271 (272)
++|+++
T Consensus 415 ~~l~~~ 420 (426)
T 1sff_A 415 EIISQC 420 (426)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 123
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.92 E-value=7.3e-25 Score=189.32 Aligned_cols=252 Identities=14% Similarity=0.064 Sum_probs=154.9
Q ss_pred ccccccC-cccchHHh---cccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 5 SSVIVGQ-AGDLEDEV---GKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 5 ~~~~~~~-~~~~~~~~---~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
.|++..+ ++.+.... +..| +++.+|.+++..+.++ +++ .++++++++++|+||||.+++ +++|.++|++
T Consensus 111 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~ 187 (400)
T 3vax_A 111 HIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQP---VAELAQQLRA 187 (400)
T ss_dssp EEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHTT
T ss_pred EEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCc---HHHHHHHHHh
Confidence 5666544 33343333 3457 9999998765333333 333 267899999999999999998 7899999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEE-ecccccc---cCCcchHHHHHhhhh
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLF---SSGFPVINDFNRIIC 152 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~---~~~~~~~~~~~~~~~ 152 (272)
+|+++|+|++|..... +..+..+ ..++++|+||.+|.+| +|+++ ++++.+. ..+............
T Consensus 188 ~~~~li~D~a~~~~~~---~~~~~~~-----~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (400)
T 3vax_A 188 TPTYLHVDAAQGYGKV---PGDLTTP-----IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERK 257 (400)
T ss_dssp SSCEEEEECTTTTTTS---GGGGGSC-----CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGG
T ss_pred cCCEEEEEhhhhcCCC---CcChhhc-----CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCceecCCCceee
Confidence 9999999999984221 1122211 2388999999877555 68877 7762211 011110100001112
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC---ceEEEeecCCCChHHHHHHHH
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN---APYVWAHFPGRKSWDVFAEIL 229 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll 229 (272)
....+.+...+.++.+++. ...+++++.+++++++++++.+.|+..|+++..+.+ +.++++.+++.+..++...|.
T Consensus 258 ~~~~~~~~~~~~a~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 336 (400)
T 3vax_A 258 LRPGTLPVPLIMGLAEAAK-IFEAEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDVDAEAFLVTLK 336 (400)
T ss_dssp TSCSCCCHHHHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCCCHHHHHHHHh
Confidence 2234456666666656655 223457889999999999999999944888887654 457788888766777777766
Q ss_pred HhcCeEeeCCCCCCCCC-----------------CCeEEEEc-c--CCHHHHHHHHHHHHHhC
Q 036024 230 EKTHITTVPGSGFGPGG-----------------EEYIRISG-F--GHRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~gi~v~~g~~~~~~~-----------------~~~~R~s~-~--~~~~~i~~~l~~l~~~l 272 (272)
+||.+.+|..|.+.. .+++|+++ . .+++++++++++|++++
T Consensus 337 --~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 397 (400)
T 3vax_A 337 --DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLK 397 (400)
T ss_dssp --HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC------------------
T ss_pred --cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHh
Confidence 599999987664311 48999998 4 47899999999998764
No 124
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.92 E-value=3.7e-24 Score=183.69 Aligned_cols=246 Identities=15% Similarity=0.063 Sum_probs=155.7
Q ss_pred cccccccCccc-ch---HHhcccc-eeEEeecCCCCCcccCCCCCCCceE-EEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LE---DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDI-IFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~---~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~-i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. .. ..++..| +++.+ .+.+ .+.- . .+++++ +++++||||||. +..++++|.++|+++
T Consensus 99 d~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-~d~~-~l~~-~--~~~~~~~v~~~~p~nptG~--~~~~l~~i~~l~~~~ 171 (374)
T 2aeu_A 99 KKVIHYLPELPGHPSIERSCKIVNAKYFES-DKVG-EILN-K--IDKDTLVIITGSTMDLKVI--ELENFKKVINTAKNK 171 (374)
T ss_dssp SEEEEECSSSSCCTHHHHHHHHTTCEEEEE-SCHH-HHHT-T--CCTTEEEEEECBCTTSCBC--CHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCCccHHHHHHHHHcCcEEEEe-CCHH-HHHh-c--CCCccEEEEEccCCCCCCC--CcccHHHHHHHHHHc
Confidence 56777766322 22 2556678 88777 3211 1111 1 357899 999999999997 778999999999999
Q ss_pred CCEEEEcccCCccccC-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+||+|..+..+ ....+...+ +..++++|+||.+ +|+|+||+++++++ ++.+.........
T Consensus 172 ~~~li~De~~~~~~~~~~~~~~~~~~----~~di~~~S~sK~l--~g~~~G~~~~~~~~--------~~~l~~~~~~~~~ 237 (374)
T 2aeu_A 172 EAIVFVDDASGARVRLLFNQPPALKL----GADLVVTSTDKLM--EGPRGGLLAGKKEL--------VDKIYIEGTKFGL 237 (374)
T ss_dssp TCCEEEECTTHHHHHHHTTCCCHHHH----TCSEEEEETTSSS--SSCSCEEEEEEHHH--------HHHHHHHHHTTTC
T ss_pred CCEEEEECCcccccccccccCCcccc----CCcEEEecCcccc--cCcceEEEEECHHH--------HHHHHHhhccccC
Confidence 9999999999876421 101112222 1238899999986 45799999998877 5666555544444
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHH----HHHHHHHHHhC----CCeEec-CCCceEEEeecCCC----ChHH
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKEN----TKILIDTLASL----GIKVYG-GINAPYVWAHFPGR----KSWD 223 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~----~~~l~~~L~~~----g~~~~~-~~~~~~~~i~l~~~----~~~~ 223 (272)
+++.+.+.++.+.+.....+..++..+..+.. .+.+.+.|... |+.+.. +.+.++.|..++.. ++.+
T Consensus 238 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 317 (374)
T 2aeu_A 238 EAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIE 317 (374)
T ss_dssp BCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccccccchHH
Confidence 56778888888887754321222222222222 45556666553 566643 43344455444321 1122
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-C--HHHHHHHHHHHHHh
Q 036024 224 VFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-H--RESILEASRRLEAL 271 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~--~~~i~~~l~~l~~~ 271 (272)
++.++++++||.+.||..| +.+.+++|++++. + +.+++++.+.|+++
T Consensus 318 ~~~~ll~~~gV~v~~g~~~-~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~ 367 (374)
T 2aeu_A 318 IGFNLLKNYGIITITVAGM-PGASKSLRIDLTSRDAERIDDNYIIKAIVES 367 (374)
T ss_dssp HHHHHHHHHCEECSTTSSS-CSSCCSEEEETTSGGGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCCCC-CCCCCeEEEEcCCchHHHHHHHHHHHHHHHH
Confidence 5667787789999999877 4456789999854 2 22377777777664
No 125
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.91 E-value=1.2e-23 Score=178.87 Aligned_cols=243 Identities=11% Similarity=0.084 Sum_probs=160.5
Q ss_pred cccccccCccc-chHH--hccc--c-eeEEeecCCCCCcccC-CCC--C-C-------CceEEEEecCCCccccCCCHHH
Q 036024 4 DSSVIVGQAGD-LEDE--VGKY--C-NIEYLECGPGNNFFPD-LKG--T-S-------RTDIIFFCSPNNPTGHAATQNQ 66 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~--~~~~--g-~~~~~~~~~~~~~~~d-l~~--~-~-------~~~~i~~~~p~nptG~~~~~~~ 66 (272)
|.|++..+++. .... +... | +++.+|.+ +..+.++ +++ . + ++++|++++|+| ||.+++.++
T Consensus 84 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~ 161 (356)
T 1v72_A 84 GNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDE 161 (356)
T ss_dssp EEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHH
T ss_pred CEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHH
Confidence 55666665433 2223 4555 8 88888875 2233332 332 2 2 578999999987 999999999
Q ss_pred HHHHHHHHHHcCCEEEEcccCCcccc--CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH
Q 036024 67 LEQLVEFARNNGSIIIFDSAYAAYVT--DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI 144 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~ 144 (272)
+++|+++|++||+++|+|++|..+.. .+.......+....+ +++.|+||. |.| ...||+++++++ .
T Consensus 162 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~-g~~-~G~g~~~~~~~~--------~ 229 (356)
T 1v72_A 162 IEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVD--ALSFGATKN-GVL-AAEAIVLFNTSL--------A 229 (356)
T ss_dssp HHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCC--EEEECCGGG-TCS-SCEEEEESSGGG--------H
T ss_pred HHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCC--EEEEecccC-CCc-CccEEEEECHHH--------H
Confidence 99999999999999999999975432 221111111111122 445689998 432 223488887776 3
Q ss_pred HHHHhhhhh-cc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCCh
Q 036024 145 NDFNRIICT-CF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKS 221 (272)
Q Consensus 145 ~~~~~~~~~-~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~ 221 (272)
+.+...... .. ...+...+.++.+.+.+. ...+..++++++++++.+.|+++ |+++..+..++++|+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~---- 302 (356)
T 1v72_A 230 TEMSYRRKRAGHLSSKMRFLSAQIDAYLTDD---LWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD---- 302 (356)
T ss_dssp HHHHHHHHHTTCCCSSTHHHHHHHHHHTSTT---HHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC----
T ss_pred hhHHHHhhccCchhhhHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC----
Confidence 444333221 11 111223333344455432 22456778889999999999986 898877778899999886
Q ss_pred HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
.++...|.++ ||.+.||. |+ .+++|+++ ..+++++++++++|++++
T Consensus 303 ~~~~~~l~~~-gi~v~~g~-~~---~~~iRi~~~~~~~~~~i~~~~~~l~~~l 350 (356)
T 1v72_A 303 SAMIDALLKA-GFGFYHDR-WG---PNVVRFVTSFATTAEDVDHLLNQVRLAA 350 (356)
T ss_dssp HHHHHHHHHT-TCBCBCSS-SS---TTEEEEECCTTCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhc-CeEEeccc-cC---CCeEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 2666776554 99999887 54 67999996 358999999999998864
No 126
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.91 E-value=4.5e-24 Score=185.89 Aligned_cols=205 Identities=14% Similarity=0.152 Sum_probs=148.4
Q ss_pred CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++|++++++|++|. +++.+++++|.++|+++|+++|+||+|.++...+...........++ ++ |+||.+| +
T Consensus 200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~d-ii---t~sK~l~-~ 274 (420)
T 2pb2_A 200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPD-IL---TSAKALG-G 274 (420)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCS-EE---EECGGGG-T
T ss_pred cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCC-eE---Eeccccc-C
Confidence 57889998888888884 68999999999999999999999999987665543322222222233 22 7899999 8
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--G 200 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g 200 (272)
|+|+||+++++++. +.+.......+++.+++++.++.+.++.... ++..++++++++++.+.|+++ +
T Consensus 275 G~~iG~~~~~~~l~--------~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 343 (420)
T 2pb2_A 275 GFPVSAMLTTQEIA--------SAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQ 343 (420)
T ss_dssp TSCCEEEEECHHHH--------TTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEhHHHH--------HhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999988763 2222222333445788888888888764322 456778888888888888764 2
Q ss_pred C---eEecCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 201 I---KVYGGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 201 ~---~~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
+ ....+ .|.++++.++.. +..++...|++ +||.+.|+. ++++|++ +..+++++++++++|++++
T Consensus 344 ~~~~~~~~~-~g~~~~v~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~------~~~iRl~~~~~~t~eei~~~~~~l~~~l 415 (420)
T 2pb2_A 344 FDIFSDIRG-MGLLIGAELKPKYKGRARDFLYAGAE-AGVMVLNAG------ADVMRFAPSLVVEEADIHEGMQRFAQAV 415 (420)
T ss_dssp HCCEEEEEE-ETTEEEEEECGGGTTCHHHHHHHHHH-TTEECEESS------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEe-cceEEEEEECCCchHHHHHHHHHHHH-CCCEEEeCC------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 2 22333 477888888742 45667777766 599999864 5789999 4579999999999998763
No 127
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.91 E-value=3e-23 Score=183.35 Aligned_cols=254 Identities=16% Similarity=0.140 Sum_probs=176.6
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
.|++..+.+. +...++..| +++.+|.+++ +.+|++. .+++++|++++| ||||.+. +++++|+++|+++
T Consensus 158 ~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~--~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~ 232 (474)
T 1wyu_B 158 VVLVPDSAHGSNPATASMAGYQVREIPSGPE--GEVDLEALKRELGPHVAALMLTNP-NTLGLFE--RRILEISRLCKEA 232 (474)
T ss_dssp EEEEETTSCTHHHHHHHHTTCEEEEECBCTT--SSBCHHHHHHHCSTTEEEEEECSS-CTTSCCC--TTHHHHHHHHHHH
T ss_pred EEEEeCCcChhhHHHHHHCCCEEEEecCCCC--CCcCHHHHHHhhCCCceEEEEECC-CCCcccC--CCHHHHHHHHHHc
Confidence 5677666555 777778888 9999998754 4455333 267899999998 5899873 3599999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC-c---cceeEEEecccccccCCcchHH----HH--
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT-G---VRLGWTVVPEELLFSSGFPVIN----DF-- 147 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~-g---~r~G~~~~~~~~~~~~~~~~~~----~~-- 147 (272)
|+++|+|++|.....+. .....+ +..+++.|+||.++.| | .|+||++++++++.....++.. .+
T Consensus 233 g~~li~Dea~~~~~~g~--~~~~~~----g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~ 306 (474)
T 1wyu_B 233 GVQLYYDGANLNAIMGW--ARPGDM----GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYL 306 (474)
T ss_dssp TCEEEEEGGGGGGTTTT--CCHHHH----TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEE
T ss_pred CCEEEEeCchhhhhccC--CCcccC----CCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEe
Confidence 99999999998655431 222233 2338889999999766 4 5999999998874321100000 00
Q ss_pred -----HhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-EEEeecC-CCC
Q 036024 148 -----NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-YVWAHFP-GRK 220 (272)
Q Consensus 148 -----~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~i~l~-~~~ 220 (272)
.........+.+..++.++...+...+.++++++.+++.++++++.+.|+++|+++..+.... .+++.++ +.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 386 (474)
T 1wyu_B 307 DFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEGFR 386 (474)
T ss_dssp ECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTTCC
T ss_pred cccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCCCC
Confidence 000000112356677777787777555677888899999999999999998888774332222 1566664 446
Q ss_pred hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
..++..+|+++ ||.+ |+..|.....+++|+++.. +++++++++++|+++
T Consensus 387 ~~~l~~~L~~~-Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~ 437 (474)
T 1wyu_B 387 ALDLAKGLLEL-GFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGAL 437 (474)
T ss_dssp HHHHHHHHHHT-TCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-Cccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 67777887776 9985 6666643346789999855 899999999999875
No 128
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.91 E-value=5.5e-23 Score=177.71 Aligned_cols=225 Identities=12% Similarity=0.042 Sum_probs=159.5
Q ss_pred Hhccc--c-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCC
Q 036024 18 EVGKY--C-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG 94 (272)
Q Consensus 18 ~~~~~--g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~ 94 (272)
.+... | +++.++.+ + ++..+.+..+++++|++++|+||||.+++.+++.++ +|+++|+|++|..+...
T Consensus 137 ~~~~~~~g~~~~~v~~~-~-g~~~~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~- 207 (398)
T 2fyf_A 137 AVSKNPFVGEPIIITSD-P-GSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLP- 207 (398)
T ss_dssp HHHHCTTSCCCEEEECC-T-TCCCCCCCCTTCSEEEEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSC-
T ss_pred HHHHhCCCCceEEEecC-C-CCCCCccccCCCCEEEEeCcCCCcceecchHHhhhh------cCCeEEEEeccccCCcc-
Confidence 34444 7 88888887 3 444444334789999999999999999995555443 89999999999864321
Q ss_pred CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh-----------------h----hh
Q 036024 95 CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----------------I----CT 153 (272)
Q Consensus 95 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~-----------------~----~~ 153 (272)
..+. +..++++|+||.+|.+| ++||++++++.+ +.+... . ..
T Consensus 208 --~~~~------~~di~~~s~sK~~~~~g-g~g~l~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (398)
T 2fyf_A 208 --VDIA------ETDAYYFAPQKNFASDG-GLWLAIMSPAAL--------SRIEAIAATGRWVPDFLSLPIAVENSLKNQ 270 (398)
T ss_dssp --CCGG------GCSEEEECTTSTTCSCS-SEEEEEECHHHH--------HHHHHHHHTTCCCCGGGCHHHHHHHHTTTC
T ss_pred --cCcc------cCcEEEEecCcccCCCC-ceEEEEECHHHH--------HHhhcccccCCCCCcEEehHHHhhhcccCC
Confidence 1221 12388999999999665 699999988773 222110 0 12
Q ss_pred ccCCcchHHHHHHHHhcccccHHH-HHHHHHHHHHHHHHHHHHHHhC-CCeEec--C--CCceEEEeecC-CCChHHHHH
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLASL-GIKVYG--G--INAPYVWAHFP-GRKSWDVFA 226 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~--~~~~~~~i~l~-~~~~~~~~~ 226 (272)
...+++...+.++.++++...... +++++++++++++++.+.|+++ |+++.. + ..+.++|+.++ +.+..++..
T Consensus 271 ~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (398)
T 2fyf_A 271 TYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVAK 350 (398)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCCCHHHHHH
Confidence 234466666766666665322222 6888999999999999999998 888874 3 23448999986 456677777
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
.|.++ ||.+.+|. ...+.+++|+++. .+++|+++++++|+++
T Consensus 351 ~L~~~-gI~v~~g~--~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 394 (398)
T 2fyf_A 351 ILRAN-GIVDTEPY--RKLGRNQLRVAMFPAVEPDDVSALTECVDWV 394 (398)
T ss_dssp HHHHT-TCBCCSCC--TTTCSSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHC-CcEEecCc--ccCCCCEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 77766 99999873 2233578999985 5899999999999875
No 129
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.91 E-value=1.3e-23 Score=179.21 Aligned_cols=244 Identities=11% Similarity=0.070 Sum_probs=163.8
Q ss_pred ccccccc-C-ccc-chHHhcccceeEEeecCC--CCCcccCCCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVG-Q-AGD-LEDEVGKYCNIEYLECGP--GNNFFPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~-~-~~~-~~~~~~~~g~~~~~~~~~--~~~~~~dl~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++.. + +.. +...++..|+++.++.+. +.+..+|+++ .+++|++++++|+||||.+++ ++++|
T Consensus 93 d~vl~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~i~~~t~~v~~~~~~n~tG~~~~--~l~~i----- 165 (362)
T 2c0r_A 93 QTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFK--AFPDT----- 165 (362)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEECS--SCCCC-----
T ss_pred CeEEEEecCcHhHHHHHHHHHhCCeEEEecccccccccCCCHHHcccCCCcCEEEEeCCcCccceecc--ccccc-----
Confidence 5555543 2 322 234555556778888763 2344445332 368999999999999999754 35554
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcc--hHHHHHh--hh
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP--VINDFNR--II 151 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~--~~~~~~~--~~ 151 (272)
+|+++++|++|..+.. +..+... .+++.|+||.+|++| +||++++++.+....+. ..-.+.. ..
T Consensus 166 -~~~~vivD~a~~~~~~---~~~~~~~------d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 233 (362)
T 2c0r_A 166 -GSVPLIGDMSSDILSR---PFDLNQF------GLVYAGAQKNLGPSG--VTVVIVREDLVAESPKHLPTMLRYDTYVKN 233 (362)
T ss_dssp -TTSCEEEECTTTTTSS---CCCGGGC------SEEEEETTTTTCCSS--CEEEEEEGGGSSSCCTTSCGGGCHHHHHHT
T ss_pred -CCCEEEEEChhhccCC---ccchhHC------cEEEEeccccccCcC--cEEEEEcHHHHhhccccCchHHhHHHHhhc
Confidence 8999999999986432 2222221 278889999999778 89999998875332110 0000000 01
Q ss_pred hhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-C-eEecC---CCceEEEeecCC-CChHHH
Q 036024 152 CTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-I-KVYGG---INAPYVWAHFPG-RKSWDV 224 (272)
Q Consensus 152 ~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~---~~~~~~~i~l~~-~~~~~~ 224 (272)
.....+++...+.++.++++..... ++++++++++++++++.+.|+++| + ++..+ ..+.++++.++. .+..++
T Consensus 234 ~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (362)
T 2c0r_A 234 NSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEF 313 (362)
T ss_dssp TTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHH
T ss_pred cCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCcchHHHH
Confidence 1233457778888888888642222 578899999999999999999987 6 76432 245668888873 344566
Q ss_pred HHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 225 FAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
...| ++.||.+.+|..+ .+++|+|++ +++++++++++.|+++
T Consensus 314 ~~~L-~~~gi~~~~g~~~----~~~iRis~~~~~~~e~i~~l~~~l~~~ 357 (362)
T 2c0r_A 314 VKAS-EQEGFVGLKGHRS----VGGLRASIYNAVPYESCEALVQFMEHF 357 (362)
T ss_dssp HHHH-HHTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHH-HHCCCeeccCCCC----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 6665 5559999888765 357999985 4899999999999875
No 130
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.91 E-value=1.1e-23 Score=181.87 Aligned_cols=206 Identities=16% Similarity=0.152 Sum_probs=148.5
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++++++||||.++ +.+.+++|+++|+++|+++|+||+|.++...+...++.......+ ++ |+||.++ +
T Consensus 184 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d-~~---s~sK~~~-~ 258 (395)
T 1vef_A 184 EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPD-IL---TLAKALG-G 258 (395)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS-EE---EECGGGG-T
T ss_pred cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCC-EE---EEccccc-C
Confidence 5788888777789999765 688899999999999999999999997544443222222221223 22 8899998 5
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 202 (272)
|+|+||+++++++ ++.+.........+.+.+.+.++.++++.... ++..++++++++++.+.|++++..
T Consensus 259 g~~~G~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~ 327 (395)
T 1vef_A 259 GVPLGVAVMREEV--------ARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSP 327 (395)
T ss_dssp TSSCEEEEEEHHH--------HHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCT
T ss_pred CCceEEEEehHHH--------HhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999998876 33332212233445778888877777763221 456788899999999999987542
Q ss_pred E--ecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 203 V--YGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 203 ~--~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+ ..+..++++|+.++. ...++...|++++||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 328 ~~~~~~~~g~~~~~~~~~-~~~~l~~~l~~~~gi~v~~~~------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 328 KIREVRGMGLMVGLELKE-KAAPYIARLEKEHRVLALQAG------PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp TEEEEEEETTEEEEEESS-CSHHHHHHHHHHHCEECEESS------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEEEEEEEEcC-hHHHHHHHHHHHCCeEEecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 1 122356889999875 366777777735599999862 67999985 468999999999998763
No 131
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.90 E-value=1.2e-23 Score=178.89 Aligned_cols=243 Identities=11% Similarity=0.105 Sum_probs=163.7
Q ss_pred cccccccCccc-chH--Hhcccc-eeEEeecCCCCCcccCCCCC-----C-------CceEEEEecCCCccccCCCHHHH
Q 036024 4 DSSVIVGQAGD-LED--EVGKYC-NIEYLECGPGNNFFPDLKGT-----S-------RTDIIFFCSPNNPTGHAATQNQL 67 (272)
Q Consensus 4 d~~~~~~~~~~-~~~--~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-------~~~~i~~~~p~nptG~~~~~~~l 67 (272)
|.|++..+.+. +.. .++..| +++.+|.+ ++.+|++.+ + +++++++++| ||||.+++.+++
T Consensus 91 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l 166 (359)
T 1svv_A 91 EAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQEL 166 (359)
T ss_dssp EEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHH
T ss_pred CEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHH
Confidence 55666666555 444 366778 99999985 344553331 2 3899999999 799999999999
Q ss_pred HHHHHHHHHcCCEEEEcccCCccccCCCCCCccc--cCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH
Q 036024 68 EQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYE--IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN 145 (272)
Q Consensus 68 ~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~ 145 (272)
++|+++|+++|+++|+||+|.++..+..+..... +....+ ++..|.+|..+ + ...|+++++++.. +
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d--~~~~s~~K~g~-~-~~~g~l~~~~~~~--------~ 234 (359)
T 1svv_A 167 EDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTD--MFYIGATKAGG-M-FGEALIILNDALK--------P 234 (359)
T ss_dssp HHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCS--EEEEECTTTTC-S-SCEEEEECSGGGC--------T
T ss_pred HHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCC--EEEEecccCCC-C-CceEEEEEcccHH--------H
Confidence 9999999999999999999965433321111111 000112 77889999744 3 4479999888773 2
Q ss_pred HHHhhh--hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHH
Q 036024 146 DFNRII--CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWD 223 (272)
Q Consensus 146 ~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~ 223 (272)
.+.... .......+.....++.+++.+ ...++.+++++++++++.+.|+..|+++..+.+++++|+.++ .+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~----~~ 307 (359)
T 1svv_A 235 NARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILE----NT 307 (359)
T ss_dssp THHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEE----HH
T ss_pred HHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHhccCCeEEccCCccceEEEEcC----HH
Confidence 332221 111111122222333444543 234778899999999999999555888887778899998875 46
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 224 VFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+...|++++||.+.+.. +.+.+++|+++ ..+++++++++++|++++
T Consensus 308 ~~~~l~~~~gi~v~~~~---~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 355 (359)
T 1svv_A 308 MIAELNNDFDMYTVEPL---KDGTCIMRLCTSWATEEKECHRFVEVLKRLV 355 (359)
T ss_dssp HHHHHTTTEECEEEEEE---TTTEEEEEEECCTTCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhcCEEEEecc---cCCCceEEEEccCcCCHHHHHHHHHHHHHHH
Confidence 77777777799983211 23467899985 468999999999998764
No 132
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.90 E-value=7.6e-23 Score=178.58 Aligned_cols=209 Identities=14% Similarity=0.121 Sum_probs=137.4
Q ss_pred ceEEEEecCCC-cccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCcccc-CCCCCceEEEecCccccCCC
Q 036024 46 TDIIFFCSPNN-PTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI-PGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 46 ~~~i~~~~p~n-ptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++++.+|| ++|. +++++.+++|.++|++||+++|+||+|.++...+........ ...++ +.++||.++ +
T Consensus 191 ~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~d----i~t~sK~l~-~ 265 (430)
T 3i4j_A 191 VAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPD----IAVLGKGLA-A 265 (430)
T ss_dssp EEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCS----EEEECGGGT-T
T ss_pred EEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCc----EEEEccccc-C
Confidence 34444444477 8887 667888999999999999999999999987666543333333 22222 236899998 6
Q ss_pred c-cceeEEEecccccccCCcchHHHHHhh----hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNRI----ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
| +|+||++++++. ++.+... ....+++.+++++.|+.++++.... ++..++++++.+++++.|.
T Consensus 266 G~~r~G~~~~~~~i--------~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~ 334 (430)
T 3i4j_A 266 GYAPLAGLLAAPQV--------YETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER---EDLTGAAKERGAQLLAGLQ 334 (430)
T ss_dssp TSSCCEEEEECHHH--------HHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred CccccEEEEECHHH--------HHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHH
Confidence 9 999999998887 5666653 3445556889999988888873222 2334444455555554444
Q ss_pred h----C-CCeEecCCCceEEEeecCCCC----------hHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHH
Q 036024 198 S----L-GIKVYGGINAPYVWAHFPGRK----------SWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRE 259 (272)
Q Consensus 198 ~----~-g~~~~~~~~~~~~~i~l~~~~----------~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~ 259 (272)
+ + ++....+ .|.++++.+.+.. ..++...++++ ||.+.|+..+. ..+.+++|+++. .+++
T Consensus 335 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e 412 (430)
T 3i4j_A 335 ALQARFPQMMQVRG-TGLLLGVVLGDLATGQAFETPGIASRIGAAALKR-GLITYPGSGAEPNGRGDHLLLGPPLSITAA 412 (430)
T ss_dssp HHHHHCTTEEEEEE-ETTEEEEEEC------------CHHHHHHHHHHT-TEECC-----------CEEEECCCTTCCHH
T ss_pred HHHHhCCCeEEEEE-EEEEEEEEeccccccCCCccHHHHHHHHHHHHhC-CCEEEecccccCCCCCCEEEEECCCCCCHH
Confidence 3 3 4555554 4678888875311 14566666655 99999984332 334678999964 6899
Q ss_pred HHHHHHHHHHHhC
Q 036024 260 SILEASRRLEALF 272 (272)
Q Consensus 260 ~i~~~l~~l~~~l 272 (272)
++++++++|++++
T Consensus 413 ~i~~~l~~l~~~l 425 (430)
T 3i4j_A 413 EVDGLLALLAGAL 425 (430)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998763
No 133
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.90 E-value=1.8e-23 Score=178.16 Aligned_cols=230 Identities=12% Similarity=0.063 Sum_probs=154.2
Q ss_pred HHhcccceeEEeecCCCCCc-ccC-CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 17 DEVGKYCNIEYLECGPGNNF-FPD-LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 17 ~~~~~~g~~~~~~~~~~~~~-~~d-l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
..++..|+++.++++++.++ .++ +++ .+++|++++++|+||||.+++ ++ . +++|+++|+|++|..+.
T Consensus 108 ~~~~~~g~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~--~i---~---~~~~~~li~D~a~~~~~ 179 (360)
T 1w23_A 108 KEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ--NF---P---EINHAPLIADMSSDILS 179 (360)
T ss_dssp HHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS--SC---C---CCCSSCEEEECTTTTTS
T ss_pred HHHHHhCCeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc--cc---c---ccCCceEEEechhhcCC
Confidence 34455567888888753342 333 433 267899999999999999987 22 2 27999999999998643
Q ss_pred cCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh-----hhhccCCcchHHHHHH
Q 036024 92 TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGASNIAQAGG 166 (272)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~ 166 (272)
. +.++..+ + ++++|+||.+|.+| +||++++++.+... .......... ......+++...+.++
T Consensus 180 ~---~~~~~~~----d--i~~~s~sK~~~~~G--~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (360)
T 1w23_A 180 R---PLKVNQF----G--MIYAGAQKNLGPSG--VTVVIVKKDLLNTK-VEQVPTMLQYATHIKSDSLYNTPPTFSIYML 247 (360)
T ss_dssp S---CCCGGGC----S--EEEEETTTTTSCTT--CEEEEEEHHHHCSC-CTTCCGGGCHHHHHHTTTCSSCCCHHHHHHH
T ss_pred C---CcCcccC----C--EEEEEcccccCCCC--cEEEEEcHHHHhhc-ccCCcchhhhhhhhhccCCCCCCCHHHHHHH
Confidence 2 1223222 2 88999999999666 89999998775322 1111000000 1122234566666666
Q ss_pred HHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-C-eEe-cC--CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCC
Q 036024 167 LACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-I-KVY-GG--INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPG 239 (272)
Q Consensus 167 ~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~-~~--~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g 239 (272)
.+++...... ++++++++++++++++.+.|++++ + ... .+ .+++++|+.+++. +..++..+| +++||.+.+|
T Consensus 248 ~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~ 326 (360)
T 1w23_A 248 RNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKA-KEQGFVGLNG 326 (360)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHHHHH-HHTTEESCBC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCCccHHHHHHHH-HHCCeeeecC
Confidence 6666532222 568899999999999999999885 5 543 12 2455899998742 234555554 4569999988
Q ss_pred CCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 240 SGFGPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 240 ~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
..+ .+++|+++. .+++++++++++|+++
T Consensus 327 ~~~----~~~iRis~~~~~~~~~i~~~~~~l~~~ 356 (360)
T 1w23_A 327 HRS----VGGCRASIYNAVPIDACIALRELMIQF 356 (360)
T ss_dssp CTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCC----CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 754 578999985 5899999999999875
No 134
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.90 E-value=6.3e-23 Score=177.39 Aligned_cols=240 Identities=13% Similarity=0.144 Sum_probs=163.3
Q ss_pred cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+ +..| +++.++.+.-..+.-.+ .++++++++++|+||||.+++ +++|+++|+++
T Consensus 104 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 178 (398)
T 2rfv_A 104 DHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAM--RPETKVVYIETPANPTLSLVD---IETVAGIAHQQ 178 (398)
T ss_dssp CEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHC--CTTEEEEEEESSBTTTTBCCC---HHHHHHHHHHT
T ss_pred CEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc
Confidence 55666666554 44444 6678 88888875111111002 257899999999999999997 99999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHH-HHHhhhhhc-
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVIN-DFNRIICTC- 154 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 154 (272)
|+++|+|++|..+.+.. ++ .+ +..+++.|+||.++.+|.|+ ||++++++. ++ .+.......
T Consensus 179 ~~~li~De~~~~~~~~~---~~-~~----~~di~~~s~sK~~~~~g~~~~G~~~~~~~~--------~~~~~~~~~~~~~ 242 (398)
T 2rfv_A 179 GALLVVDNTFMSPYCQQ---PL-QL----GADIVVHSVTKYINGHGDVIGGIIVGKQEF--------IDQARFVGLKDIT 242 (398)
T ss_dssp TCEEEEECTTTCTTTCC---GG-GG----TCSEEEEETTTTTTCSSCCCCEEEEECHHH--------HHHHHHTHHHHTT
T ss_pred CCEEEEECCCcccccCC---ch-hh----CCcEEEEeCcccccCCCCceEEEEEECHHH--------HHHHHHHHHHhCC
Confidence 99999999999755431 11 22 24599999999998899998 999999877 33 444444443
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC---------------CeEecC---CCceEEEeec
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG---------------IKVYGG---INAPYVWAHF 216 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------------~~~~~~---~~~~~~~i~l 216 (272)
..+.+.+.+.++.+.++. . ....++..++.+.+.+.|.+.+ +++..+ ..+.++++.+
T Consensus 243 ~~~~~~~~~~~~~~~l~~-~----~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~ 317 (398)
T 2rfv_A 243 GGCMSPFNAWLTLRGVKT-L----GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEI 317 (398)
T ss_dssp CCCCCHHHHHHHHHHHTT-H----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred CCCCCHHHHHHHHhhhhh-H----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence 445778888888877763 2 3344556677777777777642 222222 2466777788
Q ss_pred CCCChHHHHHHHHHhc---CeEeeCCCCCC-------------C--------CCCCeEEEEcc--CCHHHHHHHHHHHHH
Q 036024 217 PGRKSWDVFAEILEKT---HITTVPGSGFG-------------P--------GGEEYIRISGF--GHRESILEASRRLEA 270 (272)
Q Consensus 217 ~~~~~~~~~~~ll~~~---gi~v~~g~~~~-------------~--------~~~~~~R~s~~--~~~~~i~~~l~~l~~ 270 (272)
++. .+....++++. |+.+.+|+.|+ + ...+.+|+|+. .++++++++.+.|++
T Consensus 318 ~~~--~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 318 AGG--LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp TTH--HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred cCC--HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 742 22334455544 88888886642 0 11689999974 367889999998876
Q ss_pred h
Q 036024 271 L 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 396 ~ 396 (398)
T 2rfv_A 396 A 396 (398)
T ss_dssp H
T ss_pred h
Confidence 4
No 135
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.90 E-value=2e-23 Score=177.02 Aligned_cols=238 Identities=17% Similarity=0.152 Sum_probs=152.8
Q ss_pred cccccccCccc--ch--HHhcccc-eeEEeecCCCCCcccCCCC----C-------CCceEEEEecCCCcc-ccCCCHHH
Q 036024 4 DSSVIVGQAGD--LE--DEVGKYC-NIEYLECGPGNNFFPDLKG----T-------SRTDIIFFCSPNNPT-GHAATQNQ 66 (272)
Q Consensus 4 d~~~~~~~~~~--~~--~~~~~~g-~~~~~~~~~~~~~~~dl~~----~-------~~~~~i~~~~p~npt-G~~~~~~~ 66 (272)
|.|++..|++. |. ..+...| +++++ .++ ++.+|++. . ++++++++++||||| |.+++.++
T Consensus 78 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~ 154 (347)
T 1jg8_A 78 DEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLEN 154 (347)
T ss_dssp CEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHH
T ss_pred CEEEEcCcchhhhccccchhhccCeEEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHH
Confidence 66777777643 32 1345567 88777 432 33344222 1 268999999999999 99999999
Q ss_pred HHHHHHHHHHcCCEEEEcccCCccc--cCCCCCCccccCCCCCceEEEecCccccCCCccceeE-EEecccccccCCcch
Q 036024 67 LEQLVEFARNNGSIIIFDSAYAAYV--TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGW-TVVPEELLFSSGFPV 143 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~-~~~~~~~~~~~~~~~ 143 (272)
+++|+++|+++|+++++|++|.... +.+ .+...+....+ .++.|+||.+|.+ +|+ ++.++++
T Consensus 155 l~~i~~~a~~~~~~li~D~a~~~~~~~~~~--~~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~~~~-------- 219 (347)
T 1jg8_A 155 IKEICTIAKEHGINVHIDGARIFNASIASG--VPVKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGDRDF-------- 219 (347)
T ss_dssp HHHHHHHHHHHTCEEEEEETTHHHHHHHHC--CCHHHHHHTCS--EEEEESSSTTCCS---SCEEEEECHHH--------
T ss_pred HHHHHHHHHHCCCEEEeehhhhhcchhhcC--CChHHhccccc--EEEEecccccCCC---ceEEEEcCHHH--------
Confidence 9999999999999999999875321 112 12222211223 3345899999743 574 5556655
Q ss_pred HHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe-cCCCceEEEeecC--C
Q 036024 144 INDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY-GGINAPYVWAHFP--G 218 (272)
Q Consensus 144 ~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~i~l~--~ 218 (272)
++.+......... ..+...+.++...+.... + .+ ++..++++.+.+.|+++|+++. .+..+.++|+.++ +
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~---~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
T 1jg8_A 220 IERARKARKMLGGGMRQAGVLAAAGIIALTKMV-D---RL-KEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLK 294 (347)
T ss_dssp HHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-T---TH-HHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSS
T ss_pred HHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-H---HH-HHHHHHHHHHHHHHHhcCceeccCCCcceEEEEEccccc
Confidence 3444333322221 123344444444444211 1 12 2233567888888887777653 3456778999997 3
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
.+..++...|.++ ||.+.++. .+++|+++ ..+++++++++++|+++
T Consensus 295 ~~~~~~~~~l~~~-gi~v~~~~------~~~iRl~~~~~~~~e~i~~~~~~l~~~ 342 (347)
T 1jg8_A 295 VNAHGFIEALRNS-GVLANAVS------DTEIRLVTHKDVSRNDIEEALNIFEKL 342 (347)
T ss_dssp SCHHHHHHHHHHH-TEECEEEE------TTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHC-CCEEecCC------CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4567777777654 99998753 46899996 34899999999999875
No 136
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.90 E-value=1e-22 Score=181.71 Aligned_cols=254 Identities=12% Similarity=0.114 Sum_probs=172.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...++..| +++.+|++++ +.+|++. .+++++|++++|+||||.+.+ +++|.++|++
T Consensus 193 d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~ 267 (514)
T 3mad_A 193 PEAVVPVSAHAAFDKAAQYFGIKLVRTPLDAD--YRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAE 267 (514)
T ss_dssp CEEEEETTSCTHHHHHHHHHTCEEEEECBCTT--SCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHH
T ss_pred CeEEEeCccchHHHHHHHHcCCeeEEeeeCCC--CCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHH
Confidence 67777766655 888888889 9999999764 4445332 267899999999999999988 8999999999
Q ss_pred cCCEEEEcccCCccccC-----CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH--h
Q 036024 77 NGSIIIFDSAYAAYVTD-----GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN--R 149 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~--~ 149 (272)
+|+++|+|++|+++... +.+.+.... ...+..+++.|++|.++ +|.++|+++++++............+. .
T Consensus 268 ~~i~livDea~~~~~~~~~~~~g~~~~~~~~-~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 345 (514)
T 3mad_A 268 HGIGCHVDACLGGFILPWAERLGYPVPPFDF-RLEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGL 345 (514)
T ss_dssp HTCEEEEECTTTTTTHHHHHHTTCCCCCCST-TSTTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCS
T ss_pred hCCeEEEecccccccchhHHhcCCCCCcccc-cCCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCc
Confidence 99999999999976541 111111111 11233588899999875 677899999988763211100000000 0
Q ss_pred hhh-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHH
Q 036024 150 IIC-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAE 227 (272)
Q Consensus 150 ~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ 227 (272)
... ....+.+.....+....+......++++..++.+++++++.+.|+++ |+++..+. ..++++..++.+..++...
T Consensus 346 ~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~~~~~l~~~ 424 (514)
T 3mad_A 346 YFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDELNIYQVMEE 424 (514)
T ss_dssp EEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSSSCHHHHHHH
T ss_pred ccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCCCCHHHHHHH
Confidence 000 01112222222333333332334566888999999999999999997 88888765 4477777776667777777
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
|.++ ||.+ +|..| ++.+|+++. .+++++++++++|+++
T Consensus 425 L~~~-Gi~v-~g~~~----~~~~Ri~~~~~~~~~e~i~~~l~~L~~~ 465 (514)
T 3mad_A 425 MAGR-GWRL-NGLHR----PPAFHVALTLRHTEPGVVDRFLADLQDA 465 (514)
T ss_dssp HHTT-TCBC-EEETT----TTEEEEECCGGGGSTTHHHHHHHHHHHH
T ss_pred HHhc-CCEe-ccCCC----CCeEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 7766 9988 55443 467999964 3578999999999875
No 137
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.90 E-value=1.7e-23 Score=182.87 Aligned_cols=207 Identities=14% Similarity=0.042 Sum_probs=143.7
Q ss_pred CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++++++++..+||||. .++++.+++|+++|++||+++|+||+|.++...+...........++ +.|+||.+| +|
T Consensus 203 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~d----i~s~sK~~~-~G 277 (433)
T 1zod_A 203 NLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPD----ILTLSKTLG-AG 277 (433)
T ss_dssp CEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS----EEEECHHHH-TT
T ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCC----EEEeccccc-CC
Confidence 4455554433688995 57888999999999999999999999998755443222222221222 348999999 59
Q ss_pred cceeEEEecccccccCCcchHHHHHhhh--hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRII--CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 199 (272)
+|+||++++++. ++.+.... ...+.+.+++++.++.++++.... ++..++++++++++++.|+++
T Consensus 278 ~~ig~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~l~~ 346 (433)
T 1zod_A 278 LPLAAIVTSAAI--------EERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRRGLLDLME 346 (433)
T ss_dssp SSCEEEEECHHH--------HHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEEhHHH--------HHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999877 55554422 224455788888888888763211 234566777777777777653
Q ss_pred --C-CeEecCCCceEEEeecCC---------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHH
Q 036024 200 --G-IKVYGGINAPYVWAHFPG---------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEAS 265 (272)
Q Consensus 200 --g-~~~~~~~~~~~~~i~l~~---------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l 265 (272)
+ +....+ .|.++|+.++. ....++...+++ +||.+.||..|+ .++++|+++ ..+++++++++
T Consensus 347 ~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~--~~~~lRi~~~~~~t~~~i~~~l 422 (433)
T 1zod_A 347 RFDCIGDVRG-RGLLLGVEIVKDRRTKEPADGLGAKITRECMN-LGLSMNIVQLPG--MGGVFRIAPPLTVSEDEIDLGL 422 (433)
T ss_dssp HCTTEEEEEE-ETTEEEEEEEEETTTTEECTTHHHHHHHHHHH-TTEECCEECCTT--SCCEEEECCCTTCCHHHHHHHH
T ss_pred hCCCeEEEEE-EEEEEEEEEecCccccCCChHHHHHHHHHHHH-CCCeEeccCCCC--CCCEEEEECCcCCCHHHHHHHH
Confidence 3 233333 57788888753 124556666765 599999988764 357999974 56999999999
Q ss_pred HHHHHh
Q 036024 266 RRLEAL 271 (272)
Q Consensus 266 ~~l~~~ 271 (272)
++|+++
T Consensus 423 ~~l~~~ 428 (433)
T 1zod_A 423 SLLGQA 428 (433)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 138
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.90 E-value=1.4e-22 Score=175.92 Aligned_cols=224 Identities=13% Similarity=0.139 Sum_probs=155.7
Q ss_pred c-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccc
Q 036024 23 C-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYE 101 (272)
Q Consensus 23 g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 101 (272)
| +++.+|. .+ .+.-.+ .++++++++++|+||||.+++ +++|.++|+++|+++|+|++|.. +..+..+..
T Consensus 146 g~~~~~v~~-~~-~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---g~~~~~~~~ 215 (416)
T 1qz9_A 146 GYTLRLVDS-PE-ELPQAI--DQDTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA---GAVPVDLHQ 215 (416)
T ss_dssp SCEEEEESS-GG-GHHHHC--STTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT---TTSCCCHHH
T ss_pred CceEEEeCc-HH-HHHHHh--CCCceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc---cCcCCChhh
Confidence 7 8888887 11 111112 257899999999999999998 89999999999999999999974 221222323
Q ss_pred cCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHH-Hh---------------hhhhccCCcchHHHH
Q 036024 102 IPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDF-NR---------------IICTCFNGASNIAQA 164 (272)
Q Consensus 102 ~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~~~~~~ 164 (272)
+. ..+++.|++|.++ +|.++ |+++++++....... ....+ .. .......+.+...+.
T Consensus 216 ~~----~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~~~l~~-~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (416)
T 1qz9_A 216 AG----ADYAIGCTYKYLN-GGPGSQAFVWVSPQLCDLVPQ-PLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLA 289 (416)
T ss_dssp HT----CSEEEECSSSTTC-CCTTCCCEEEECTTTTTTSCC-SCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHH
T ss_pred cC----CCEEEecCcccCC-CCCCCeEEEEECHHHHhccCC-CccccCccccccCCCCccCCCcchHHhcCCCCCHHHHH
Confidence 21 2388899999985 67777 999999887432111 10000 00 011223346666666
Q ss_pred HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCC----CceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024 165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGI----NAPYVWAHFPGRKSWDVFAEILEKTHITT 236 (272)
Q Consensus 165 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~----~~~~~~i~l~~~~~~~~~~~ll~~~gi~v 236 (272)
++.++++.....++++++++++++++++.+.|+++ |+++..+. .+.++|+.+++ ..++...|.++ ||.+
T Consensus 290 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~l~~~-gi~~ 366 (416)
T 1qz9_A 290 MVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE--GYAVIQALIDR-GVIG 366 (416)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT--HHHHHHHHHTT-TEEC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC--HHHHHHHHHhC-CcEe
Confidence 66666653322456888999999999999999986 88887764 35788998874 55666666655 9987
Q ss_pred eCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 237 VPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 237 ~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
... +.+++|+++. .+++++++++++|+++
T Consensus 367 ~~~------~~~~lRis~~~~~~t~~~i~~~~~~l~~~ 398 (416)
T 1qz9_A 367 DYR------EPRIMRFGFTPLYTTFTEVWDAVQILGEI 398 (416)
T ss_dssp EEE------TTTEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred ccC------CCCeEEEeCcccCCCHHHHHHHHHHHHHH
Confidence 532 3578999975 4899999999999875
No 139
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.90 E-value=6.7e-23 Score=180.21 Aligned_cols=239 Identities=13% Similarity=0.089 Sum_probs=156.3
Q ss_pred chHHhcccc-eeEEeecCCC----C----CcccCCCCC-----CC----ceEEEEecCCC-ccccCCCHHHHHHHHHHHH
Q 036024 15 LEDEVGKYC-NIEYLECGPG----N----NFFPDLKGT-----SR----TDIIFFCSPNN-PTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~----~----~~~~dl~~~-----~~----~~~i~~~~p~n-ptG~~~~~~~l~~l~~~~~ 75 (272)
+...+...| +++.++++++ . ++.+|++.+ ++ ++++++++|+| |||.+++.+++++|+++|+
T Consensus 126 ~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~ 205 (456)
T 2ez2_A 126 TRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTE 205 (456)
T ss_dssp HHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHH
T ss_pred hHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHH
Confidence 567778888 9999988732 2 245564431 22 48899999998 9999999999999999999
Q ss_pred HcCCEEEEcccCCc----------cccCCCCCCcc----ccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCC
Q 036024 76 NNGSIIIFDSAYAA----------YVTDGCPRSIY----EIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSG 140 (272)
Q Consensus 76 ~~~~~vi~D~~~~~----------~~~~~~~~~~~----~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~ 140 (272)
+||+++|+||+|.. +.+.+. ++. ......+ ++++ |++|..+ +| +.||++++ +++
T Consensus 206 ~~~i~li~De~~~~g~~~~~~~~~~~~~g~--~~~~~~~~~~~~~d-~~~~-S~kk~~~-~~-~gG~~~~~~~~~----- 274 (456)
T 2ez2_A 206 AHGIKVFYDATRCVENAYFIKEQEQGFENK--SIAEIVHEMFSYAD-GCTM-SGKKDCL-VN-IGGFLCMNDDEM----- 274 (456)
T ss_dssp HTTCCEEEECTTHHHHHHHHHHHSTTCTTS--CHHHHHHHHHTTCS-EEEE-ETTTTTC-CS-SCEEEEESCHHH-----
T ss_pred HcCCeEEEEccccccccccccccccccCCc--chhhhhhhhcccCC-EEEE-eCcccCC-CC-ceeEEEECCHHH-----
Confidence 99999999999985 233332 211 1111223 3444 6788765 66 78999984 555
Q ss_pred cchHHHHHhhhhhc-----cCCcchHHHHH-HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEe
Q 036024 141 FPVINDFNRIICTC-----FNGASNIAQAG-GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWA 214 (272)
Q Consensus 141 ~~~~~~~~~~~~~~-----~~~~~~~~~~a-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i 214 (272)
.+.+....... ..+.+.....+ +.+.++... ++..++.+++.+++.+.|++.|+.+..+.+++++|+
T Consensus 275 ---~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~ 347 (456)
T 2ez2_A 275 ---FSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ----YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFL 347 (456)
T ss_dssp ---HHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEE
T ss_pred ---HHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEE
Confidence 34443332211 11223233333 333322111 344455567778888889888888877778899999
Q ss_pred ec----CCCChHHH-----HHHHHHhcCeEeeC-CCCCC----------CCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 215 HF----PGRKSWDV-----FAEILEKTHITTVP-GSGFG----------PGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 215 ~l----~~~~~~~~-----~~~ll~~~gi~v~~-g~~~~----------~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
.+ ++.+..++ ..+|++++||.+.+ |..|. ..+.+++|+++. .+++++++++++|+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~ 427 (456)
T 2ez2_A 348 DARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKL 427 (456)
T ss_dssp EHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred EhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 86 33334444 56665677998766 44331 122478999975 6899999999999875
No 140
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.90 E-value=1.5e-22 Score=174.65 Aligned_cols=206 Identities=17% Similarity=0.107 Sum_probs=141.9
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++.+++|++|.. ++++.+++|.++|++||+++|+||+|.++...+........... ..+.|+||.++ +
T Consensus 178 ~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~----~d~~t~sK~~~-~ 252 (395)
T 3nx3_A 178 EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQIL----PDIMTSAKALG-C 252 (395)
T ss_dssp TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCC----CSEEEECGGGT-T
T ss_pred CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCC----CCEEEeccccc-C
Confidence 577888888777777766 77888999999999999999999999987554433222222222 22447899998 6
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH----h
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA----S 198 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~ 198 (272)
|+|+||++++++.+ .+.+.......+.+.+++++.++.++++.... ++..++.+++.+++++.|. .
T Consensus 253 G~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~ 322 (395)
T 3nx3_A 253 GLSVGAFVINQKVA-------SNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE---EKILENVNKLTPYLEQSLDELINE 322 (395)
T ss_dssp TSCCEEEEECHHHH-------HHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEchhhh-------hhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988761 23333333344556788999888888863221 2233444444444444444 3
Q ss_pred CC-CeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 199 LG-IKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 199 ~g-~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
++ +.... ..+.++|+.++.. ...++...++++ ||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 323 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~------~~~iRi~~~~~~t~e~i~~~l~~l~~~l 392 (395)
T 3nx3_A 323 FDFCKKRK-GLGFMQGLSLDKSVKVAKVIQKCQEN-ALLLISCG------ENDLRFLPPLILQKEHIDEMSEKLRKAL 392 (395)
T ss_dssp CTTEEEEE-EETTEEEEEECTTSCHHHHHHHHHHT-TEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEE-eEEEEEEEEeCCcchHHHHHHHHHHC-CCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 33 33333 3577889998753 456666666655 99998864 67999984 569999999999998763
No 141
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.90 E-value=8.2e-23 Score=179.63 Aligned_cols=241 Identities=17% Similarity=0.144 Sum_probs=153.4
Q ss_pred cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +.. .++..| +++.++.+.-..+.-.+ .++++++++++|+||||.+++ +++|+++|+++
T Consensus 172 d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i--~~~tk~v~l~~p~NptG~v~~---l~~i~~la~~~ 246 (464)
T 1ibj_A 172 EEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAI--GPQTKLVWLESPTNPRQQISD---IRKISEMAHAQ 246 (464)
T ss_dssp CEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHC--CSSEEEEEECSSCTTTCCCCC---HHHHHHHHHTT
T ss_pred CEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHh--ccCceEEEEeCCCCCCCEeec---HHHHHHHHHHc
Confidence 56777666554 443 246678 88888875111111102 268999999999999999997 89999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecc-cccccCCcchHHHHHhhhhhcc
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
|+++|+||+|..... ..++ .+ ++.+++.|+||.++. +|+|+||+++++ ++ .+.+........
T Consensus 247 gi~livDea~~~g~~---~~~~-~~----~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l--------~~~l~~~~~~~g 310 (464)
T 1ibj_A 247 GALVLVDNSIMSPVL---SRPL-EL----GADIVMHSATKFIAGHSDVMAGVLAVKGEKL--------AKEVYFLQNSEG 310 (464)
T ss_dssp TCEEEEECTTTCTTT---CCGG-GT----TCSEEEEETTTTTTCSSCCCCEEEEECSHHH--------HHHHHHHHHHTT
T ss_pred CCEEEEECCCccccc---CChh-hc----CCEEEEECCcccccCCCCCcEEEEEEChHHH--------HHHHHHHHHhcC
Confidence 999999999975221 1122 22 345999999998864 489999999986 44 555555544344
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--------------C-CCeEecCC---CceEEEeecC
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--------------L-GIKVYGGI---NAPYVWAHFP 217 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--------------~-g~~~~~~~---~~~~~~i~l~ 217 (272)
...+.+.+.++.+.++... . +.+...++...+.+.|++ + ++++..++ .+.++++.++
T Consensus 311 ~~~~~~~~~a~~~al~~~~-~----r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~ 385 (464)
T 1ibj_A 311 SGLAPFDCWLCLRGIKTMA-L----RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG 385 (464)
T ss_dssp CBCCHHHHHHHHHHHTTHH-H----HHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS
T ss_pred CCCCHHHHHHHHhchhhHH-H----HHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC
Confidence 4467778877777776322 1 122222333333333332 2 34444443 3568888885
Q ss_pred CCChHHHHHHHHHhcCeEeeCCC------------CCCC---------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 218 GRKSWDVFAEILEKTHITTVPGS------------GFGP---------GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 218 ~~~~~~~~~~ll~~~gi~v~~g~------------~~~~---------~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
+....+.+...++..||.+.+|. .++. .+++++|+++.. |++++++++|++++
T Consensus 386 ~~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~--edi~~li~~L~~al 459 (464)
T 1ibj_A 386 SVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI--EDVDDLISDLDIAF 459 (464)
T ss_dssp CHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS--SCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHH
Confidence 32122223333445699998886 2221 125789999866 78899999888763
No 142
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.90 E-value=7e-23 Score=179.28 Aligned_cols=206 Identities=11% Similarity=0.081 Sum_probs=147.8
Q ss_pred CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++++++..+|+||. .++++++++|.++|++||+++|+||+|.++...+...........+| ++ |+||.+| +
T Consensus 222 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~D--i~--t~sK~l~-~ 296 (439)
T 2oat_A 222 PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPD--IV--LLGKALS-G 296 (439)
T ss_dssp TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS--EE--EECGGGG-T
T ss_pred CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCc--EE--Eeccccc-C
Confidence 45666666555778996 56889999999999999999999999987655443222222222233 22 8999998 7
Q ss_pred c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 201 (272)
| +|+||++++++.. +.+.......+++.+++++.++.+.++.... ++..++++++.+++++.|+++++
T Consensus 297 G~~~~G~v~~~~~~~--------~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~ 365 (439)
T 2oat_A 297 GLYPVSAVLCDDDIM--------LTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKLPS 365 (439)
T ss_dssp TSSCCEEEEECHHHH--------TTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTSCT
T ss_pred CCCCeEEEEECHHHH--------hccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHhcC
Confidence 8 9999999998773 3333323344556788888888777763222 35678889999999999988754
Q ss_pred eEe--cCCCceEEEeecCC---CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 202 KVY--GGINAPYVWAHFPG---RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 202 ~~~--~~~~~~~~~i~l~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
.+. .+..|.++|+.++. .+..++...++++ ||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 366 ~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~-Gv~v~~~~------~~~iRi~~~~~~t~e~i~~~l~~l~~~l 436 (439)
T 2oat_A 366 DVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDN-GLLAKPTH------GDIIRFAPPLVIKEDELRESIEIINKTI 436 (439)
T ss_dssp TTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHT-TEECCBSS------SSEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHC-CeEEecCC------CCEEEEECccCCCHHHHHHHHHHHHHHH
Confidence 321 12357788999874 2456777777765 99998742 57899975 569999999999998763
No 143
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2e-22 Score=179.15 Aligned_cols=253 Identities=10% Similarity=0.028 Sum_probs=170.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+... +...+...| +++.+|++++ ++..|++.+ +++++|++++|+||||.+.+ +++|.++|++
T Consensus 159 ~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~la~~ 234 (497)
T 3mc6_A 159 PEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT-TYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGKIAQK 234 (497)
T ss_dssp CEEEEETTSCHHHHHHHHHSCCEEEEECBCTT-TCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTTHHHH
T ss_pred ceEEEeCCccHHHHHHHHHcCCeEEEEecCcc-cCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHHHHHH
Confidence 55666666555 778888889 9999999863 455554442 57899999999999999977 8899999999
Q ss_pred cCCEEEEcccCCccccC-----CCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024 77 NGSIIIFDSAYAAYVTD-----GCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI 150 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
+|+++++|++|+.+... +.+ .+..... ..+..+++.|++|.++ ++.++||++++++.+..........+...
T Consensus 235 ~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~-~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 312 (497)
T 3mc6_A 235 YKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFR-VPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPAWTGG 312 (497)
T ss_dssp TTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTT-STTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTTCTTS
T ss_pred hCCEEEEECcchhhhhhhhhhhcccCCcccccc-CCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccccccCC
Confidence 99999999999865422 100 1011111 1223488889999874 67789999998876321110000000000
Q ss_pred --hhhc-cCCcc---hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecCCCChH
Q 036024 151 --ICTC-FNGAS---NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFPGRKSW 222 (272)
Q Consensus 151 --~~~~-~~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~~~~~~ 222 (272)
.... ..+.+ ..++.++...+. ...+++..++..++++++.+.|++. |+.+..+..+.++++..++.+..
T Consensus 313 ~~~~~~~~g~~~~~~~~a~~aal~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~~~~ 389 (497)
T 3mc6_A 313 LYGSPTLAGSRPGAIVVGCWATMVNMG---ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLNIH 389 (497)
T ss_dssp CBCCSSSCSSCBHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTTTHH
T ss_pred CcCCcCcccCCcchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCCCHH
Confidence 0000 00011 233444444443 3455788899999999999999994 89988665667777777766677
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL 271 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~ 271 (272)
++...|.++ ||.+.++.. +..+|+++. .+++++++++++|+++
T Consensus 390 ~l~~~L~~~-Gi~v~~~~~-----~~~~ri~~~~~t~e~i~~~~~~L~~~ 433 (497)
T 3mc6_A 390 ELSDRLSKK-GWHFNALQK-----PVALHMAFTRLSAHVVDEICDILRTT 433 (497)
T ss_dssp HHHHHHHTT-TCBCEECCS-----SCCEEEECCTTTTCTHHHHHHHHHHH
T ss_pred HHHHHHHhC-CEEEecCCC-----CCeEEEEEeCCCHHHHHHHHHHHHHH
Confidence 777777666 999876542 246788864 4888999999998875
No 144
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.89 E-value=1.8e-22 Score=177.35 Aligned_cols=210 Identities=14% Similarity=0.104 Sum_probs=146.1
Q ss_pred CCceEEEEecC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSP-NNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++++++++.+ +| ||.++ +++.+++|.++|++||+++|+||+|.++...+...........++ +.|+||.++
T Consensus 214 ~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l~- 287 (452)
T 3n5m_A 214 ETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPD----IITMAKGIT- 287 (452)
T ss_dssp GGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS----EEEECGGGG-
T ss_pred CCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCC----EEeeccccc-
Confidence 35566777777 89 99766 888899999999999999999999998765553322322222222 336899998
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHH------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFN------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
.| +|+||++++++. ++.+. .+....+.+.+++++.++.++++.... +...++++++.+++++
T Consensus 288 ~G~~~ig~~~~~~~i--------~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~ 356 (452)
T 3n5m_A 288 SAYLPLSATAVKREI--------YEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN---ENLIERSAQMGSLLLE 356 (452)
T ss_dssp TTSSCCEEEEEEHHH--------HGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEECHHH--------HHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence 59 999999998887 44442 122335556888999988888873222 3345556666666666
Q ss_pred HHHhC-----CCeEecCCCceEEEeecCC-CC---------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCC
Q 036024 195 TLASL-----GIKVYGGINAPYVWAHFPG-RK---------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGH 257 (272)
Q Consensus 195 ~L~~~-----g~~~~~~~~~~~~~i~l~~-~~---------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~ 257 (272)
.|.++ .+....+ .|.++++.+.. .. ..++...++++ ||.+.|+..|.+...+++||+ +..+
T Consensus 357 ~L~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~~~~~~~iRi~~~~~~t 434 (452)
T 3n5m_A 357 QLKEEIGEHPLVGDIRG-KGLLVGIELVNDKETKEPIDNDKIASVVNACKEK-GLIIGRNGMTTAGYNNILTLAPPLVIS 434 (452)
T ss_dssp HHHHHHTTCTTEEEEEE-SSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHT-TEECEECTTSSTTCCCEEEECCCTTCC
T ss_pred HHHHHHhcCCCeEEEEE-EEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHC-CcEEeecCcccCCCCCEEEEECCCCCC
Confidence 66543 2334443 56677777631 11 13456666655 999999988876667899997 5669
Q ss_pred HHHHHHHHHHHHHhC
Q 036024 258 RESILEASRRLEALF 272 (272)
Q Consensus 258 ~~~i~~~l~~l~~~l 272 (272)
++++++++++|++++
T Consensus 435 ~e~i~~~l~~l~~~l 449 (452)
T 3n5m_A 435 SEEIAFVIGTLKTAM 449 (452)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998763
No 145
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.89 E-value=1.1e-22 Score=177.10 Aligned_cols=194 Identities=17% Similarity=0.172 Sum_probs=138.9
Q ss_pred EEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-c
Q 036024 48 IIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-V 124 (272)
Q Consensus 48 ~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~ 124 (272)
.+++++| |||||. +++++.+++|.++|++||+++|+||+|.++...+......... ...++ .||||.+| +| +
T Consensus 214 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~-~~~d~---~t~sK~~~-~G~~ 288 (419)
T 2eo5_A 214 AGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFN-TVPDV---ITLAKALG-GGIM 288 (419)
T ss_dssp EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSE---EEECGGGG-TTTS
T ss_pred EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcC-CCCCE---EEeccccc-CCcc
Confidence 3444556 567896 6788889999999999999999999999876554322222222 22232 27999999 69 9
Q ss_pred ceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe
Q 036024 125 RLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY 204 (272)
Q Consensus 125 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 204 (272)
|+||+++++++. . + ......+.+.+++++.++.++++.. ++..++++++++++.+.|.++ +...
T Consensus 289 riG~~~~~~~~~-~--------~-~~~~~~t~~~n~~~~~aa~aal~~~-----~~~~~~~~~~~~~l~~~L~~~-~~~~ 352 (419)
T 2eo5_A 289 PIGATIFRKDLD-F--------K-PGMHSNTFGGNALACAIGSKVIDIV-----KDLLPHVNEIGKIFAEELQGL-ADDV 352 (419)
T ss_dssp CCEEEEEEGGGC-C--------C-------CCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHTTS-SSEE
T ss_pred ceEEEEEchHhh-c--------C-CcccCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHh-hhhe
Confidence 999999988873 2 2 1122334557889999888888631 227789999999999999886 4334
Q ss_pred cCCCceEEEeecC-C-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 205 GGINAPYVWAHFP-G-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 205 ~~~~~~~~~i~l~-~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
.+ .|.++|+.+. . .... +...|+ ++||.+.|+. .+++|+++ ..+++++++++++|+++
T Consensus 353 ~~-~g~~~~i~~~~~~~~~~-~~~~l~-~~Gv~v~~~~------~~~lRis~~~~~t~e~i~~~l~~l~~~ 414 (419)
T 2eo5_A 353 RG-IGLAWGLEYNEKKVRDR-IIGESF-KRGLLLLPAG------RSAIRVIPPLVISEEEAKQGLDILKKV 414 (419)
T ss_dssp EE-ETTEEEEECSCHHHHHH-HHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred Ee-eeEEEEEEEecCccHHH-HHHHHH-HCCCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 43 5778888884 2 1233 666666 5599999864 57899974 56999999999999875
No 146
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.89 E-value=5.6e-22 Score=167.16 Aligned_cols=240 Identities=16% Similarity=0.144 Sum_probs=158.0
Q ss_pred cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH-
Q 036024 4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN- 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~- 76 (272)
|.|++..+.+. +...+ +..| +++.++...-..+.-.++ ++++++++++|+||||.+++ +++|.++|++
T Consensus 38 ~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~--~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~ 112 (331)
T 1pff_A 38 DHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK--PNTRIVYFETPANPTLKVID---IEDAVKQARKQ 112 (331)
T ss_dssp CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC--TTEEEEEEESSCTTTCCCCC---HHHHHHHHTTS
T ss_pred CEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc--CCCeEEEEECCCCCcCcccC---HHHHHHHHhhh
Confidence 55666666555 44443 3467 888887632111111122 67899999999999999997 8999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc-eeEEEecc-cccccCCcchHHHHHhhhhh-
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR-LGWTVVPE-ELLFSSGFPVINDFNRIICT- 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~~~~-~~~~~~~~~~~~~~~~~~~~- 153 (272)
+|+++|+|++|..+.... ++ . .++.+++.|+||.+|.+|.| +||+++++ ++ .+.+......
T Consensus 113 ~~~~li~D~a~~~~~~~~---~~-~----~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~--------~~~l~~~~~~~ 176 (331)
T 1pff_A 113 KDILVIVDNTFASPILTN---PL-D----LGVDIVVHSATKYINGHTDVVAGLVCSRADII--------AKVKSQGIKDI 176 (331)
T ss_dssp SSCEEEEECTTTHHHHCC---GG-G----GTCSEEEEETTTTTSSSSSCCCEEEEECHHHH--------HHHHHTCCCCC
T ss_pred cCCEEEEECCCcccccCC---hh-h----cCCcEEEEECccccCCCCCceEEEEEeCcHHH--------HHHHHHHHHhh
Confidence 999999999998655431 22 2 23459999999999989999 79999988 66 5666655544
Q ss_pred ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCeEecC---CCceEEEee
Q 036024 154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---------------GIKVYGG---INAPYVWAH 215 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------------g~~~~~~---~~~~~~~i~ 215 (272)
...+.+...+.++...+. +...+.+...++.+.+.+.+++. ++++.++ ..+.++++.
T Consensus 177 ~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
T 1pff_A 177 TGAIISPHDAWLITRGTL-----TLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFD 251 (331)
T ss_dssp CCCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEE
T ss_pred cCCCCCHHHHHHHHcCcc-----hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence 344566666665555543 22334455566666666666543 1222211 135677788
Q ss_pred cCCCChHHHHHHHHHhcCeEeeCCC---------CCC---------------CCCCCeEEEEcc--CCHHHHHHHHHHHH
Q 036024 216 FPGRKSWDVFAEILEKTHITTVPGS---------GFG---------------PGGEEYIRISGF--GHRESILEASRRLE 269 (272)
Q Consensus 216 l~~~~~~~~~~~ll~~~gi~v~~g~---------~~~---------------~~~~~~~R~s~~--~~~~~i~~~l~~l~ 269 (272)
++ +. +...+++++.||.+.+.+ .|. ....+.+|+|+. .++++++++.+.|+
T Consensus 252 ~~--~~-~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~ 328 (331)
T 1pff_A 252 VD--GL-EKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALD 328 (331)
T ss_dssp CS--SH-HHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred EC--CH-HHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHH
Confidence 76 33 445566677799876553 110 012589999974 47889999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
+++
T Consensus 329 ~~~ 331 (331)
T 1pff_A 329 LVL 331 (331)
T ss_dssp TC-
T ss_pred HhC
Confidence 764
No 147
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.89 E-value=8.7e-22 Score=171.27 Aligned_cols=229 Identities=17% Similarity=0.169 Sum_probs=152.3
Q ss_pred eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024 24 NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP 96 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~ 96 (272)
+.++++.+++ ++.+|++.+ +++++|++++|+||+-. ++++|.++|+++|+++|+||+|. ++.+.+..
T Consensus 146 ~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~-----~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~ 219 (425)
T 3ecd_A 146 NALQYGVSRD-TMLIDYDQVEALAQQHKPSLIIAGFSAYPRKL-----DFARFRAIADSVGAKLMVDMAHIAGVIAAGRH 219 (425)
T ss_dssp EEEEECCCTT-TSSCCHHHHHHHHHHHCCSEEEEECSCCCSCC-----CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSS
T ss_pred eeeecCCCcc-cCccCHHHHHHHHhhcCCcEEEEccccCCCcC-----CHHHHHHHHHHcCCEEEEECcChHhhhhcccc
Confidence 4456665544 455664431 57899999999997533 37999999999999999999965 33333322
Q ss_pred CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC-CcchHHHHHHHHhcccccH
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN-GASNIAQAGGLACLSSEGL 175 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~ 175 (272)
.+.... .+ ++++|+||.+ +|.|.||++++++.+ .+.+......... +++...+.++...+.....
T Consensus 220 ~~~~~~---~d--i~~~s~sK~l--~g~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 285 (425)
T 3ecd_A 220 ANPVEH---AH--VVTSTTHKTL--RGPRGGFVLTNDEEI-------AKKINSAVFPGLQGGPLMHVIAGKAVAFGEALT 285 (425)
T ss_dssp CCGGGT---CS--EEEEESSGGG--CCCSCEEEEESCHHH-------HHHHHHHHC-----CCCHHHHHHHHHHHHHHTS
T ss_pred cCchhc---Cc--EEEecCCccc--CCCCcEEEEeCCHHH-------HHHHHhhhCccccCCccHHHHHHHHHHHHHHHH
Confidence 222111 12 8899999988 567899999986542 4444443332222 2344444444444433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCC-CChHHHHHHHHHhcCeEee----CCCCCCCCCCCe
Q 036024 176 EAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPG-RKSWDVFAEILEKTHITTV----PGSGFGPGGEEY 249 (272)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~----~g~~~~~~~~~~ 249 (272)
++.++.+++++++++++.+.|.+.|+.+..+ ..++++|+.++. ..+.+.+.++++++||.+. ||..+.+...+.
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~ 365 (425)
T 3ecd_A 286 DDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSG 365 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccc
Confidence 5668889999999999999999999988764 467889998863 2234555555677799999 544333344578
Q ss_pred EEEEcc------CCHHHHHHHHHHHHHhC
Q 036024 250 IRISGF------GHRESILEASRRLEALF 272 (272)
Q Consensus 250 ~R~s~~------~~~~~i~~~l~~l~~~l 272 (272)
+|+++. .++++++++++.|++++
T Consensus 366 iRi~~~~~~~~~~~~e~i~~~~~~l~~~l 394 (425)
T 3ecd_A 366 IRLGTPAGTTRGFGAAEFREVGRLILEVF 394 (425)
T ss_dssp EEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred eeccchhheeccCCHHHHHHHHHHHHHHH
Confidence 999931 24899999999988753
No 148
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.89 E-value=4.8e-22 Score=173.48 Aligned_cols=203 Identities=11% Similarity=-0.004 Sum_probs=143.4
Q ss_pred CceEEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++.+ |||||. .++++++++|+++|+++|+++|+||+|.++...+......... ...+ +.|+||.++ +
T Consensus 204 ~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~-~~~d---~~t~sK~l~-~ 278 (429)
T 1s0a_A 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAE-IAPD---ILCLGKALT-G 278 (429)
T ss_dssp TEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCS---EEEECGGGG-T
T ss_pred CEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcC-CCCC---EEEeccccc-C
Confidence 4455554444 699995 6678889999999999999999999998765444222222222 2222 227899998 7
Q ss_pred c-cceeEEEecccccccCCcchHHHHHhh-----hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 196 (272)
| +|+||+++++++ ++.+... ....+.+.+.+++.++.++++.... ++..++++++++++++.|
T Consensus 279 G~~~iG~~~~~~~~--------~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L 347 (429)
T 1s0a_A 279 GTMTLSATLTTREV--------AETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQL 347 (429)
T ss_dssp SSSCCEEEEECHHH--------HHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHH
T ss_pred CCccceEEEeCHHH--------HHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHH
Confidence 8 999999998877 4555432 1223445788888888888763211 245677888889999998
Q ss_pred HhC----CCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024 197 ASL----GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE 269 (272)
Q Consensus 197 ~~~----g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~ 269 (272)
+++ ++....+ .|.++|+.++. .+..++...|+++ ||.+.|+ .+++|++ +..+++++++++++|+
T Consensus 348 ~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~-------~~~iRis~~~~~t~e~i~~~~~~l~ 418 (429)
T 1s0a_A 348 APARDAEMVADVRV-LGAIGVVETTHPVNMAALQKFFVEQ-GVWIRPF-------GKLIYLMPPYIILPQQLQRLTAAVN 418 (429)
T ss_dssp GGGGGCTTEEEEEE-ETTEEEEEESSCBCHHHHHHHHHHT-TEECCCB-------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEEE-eeEEEEEEECCcccHHHHHHHHHHC-CCEEecc-------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 875 3443343 46789999874 3556677777654 9999873 2689999 4679999999999998
Q ss_pred HhC
Q 036024 270 ALF 272 (272)
Q Consensus 270 ~~l 272 (272)
+++
T Consensus 419 ~~~ 421 (429)
T 1s0a_A 419 RAV 421 (429)
T ss_dssp HHT
T ss_pred HHH
Confidence 864
No 149
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.89 E-value=1e-22 Score=177.93 Aligned_cols=204 Identities=10% Similarity=0.067 Sum_probs=145.3
Q ss_pred CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++++++..+|+||.+ ++++++++|.++|+++|+++|+||+|.++...+...........++ + .|+||.+| +
T Consensus 211 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~d--i--~t~sK~l~-~ 285 (433)
T 1z7d_A 211 PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPD--V--ILLGKALS-G 285 (433)
T ss_dssp TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS--E--EEECGGGG-T
T ss_pred CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCC--E--EEECcccc-C
Confidence 567776666557789975 6888999999999999999999999987654443222222222223 2 28999999 8
Q ss_pred c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-- 199 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 199 (272)
| +|+||+++++++. +.+.......+++.+++++.++.+.++.... ++..++++++.+++++.|+++
T Consensus 286 G~~~~G~v~~~~~~~--------~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~ 354 (433)
T 1z7d_A 286 GHYPISAVLANDDIM--------LVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELK 354 (433)
T ss_dssp TSSCCEEEEECHHHH--------TTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEEEECHHHH--------hhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999998773 3333222334455788888888887763222 246677888888888888765
Q ss_pred CCe---EecCCCceEEEeecCCC--ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 200 GIK---VYGGINAPYVWAHFPGR--KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 200 g~~---~~~~~~~~~~~i~l~~~--~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
++. ... ..|.++|+.++.. +..++...|+++ ||.+.|+ +.+++|+++ ..+++++++++++|+++
T Consensus 355 ~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~l~~~-Gv~v~~~------~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 425 (433)
T 1z7d_A 355 DSKIVRDVR-GKGLLCAIEFKNELVNVLDICLKLKEN-GLITRDV------HDKTIRLTPPLCITKEQLDECTEIIVKT 425 (433)
T ss_dssp TCTTEEEEE-EETTEEEEEECTTTCCHHHHHHHHHHT-TEECCEE------TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred hCCCeEEEE-eeeeEEEEEEccChhHHHHHHHHHHHC-CeEEecC------CCCEEEEECCcCCCHHHHHHHHHHHHHH
Confidence 432 222 3577889998742 456677777765 9999875 257899975 46999999999999875
No 150
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.89 E-value=1e-21 Score=172.29 Aligned_cols=228 Identities=17% Similarity=0.188 Sum_probs=154.5
Q ss_pred eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024 24 NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP 96 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~ 96 (272)
.+++++++++ ++.+|++.+ ++++++++++|+||++. ++++|.++|+++|+++|+|++|. ++.+.+..
T Consensus 159 ~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~ 232 (447)
T 3h7f_A 159 ENGFYGVDPA-THLIDMDAVRATALEFRPKVIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLH 232 (447)
T ss_dssp EEEEECCCTT-TCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSS
T ss_pred EEEEcCcCcc-cCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCC
Confidence 5566666644 455664432 46889999999999987 48999999999999999999975 33443322
Q ss_pred CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC-CcchHHHHHHHHhcccccH
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN-GASNIAQAGGLACLSSEGL 175 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~ 175 (272)
.... .. .+ +++.|+||+++ |+|.||+++++++ .+.+......... +++...+.++...+.....
T Consensus 233 ~~~~--~~-~d--i~~~s~sK~l~--G~~gG~i~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 297 (447)
T 3h7f_A 233 PSPV--PH-AD--VVSTTVHKTLG--GGRSGLIVGKQQY--------AKAINSAVFPGQQGGPLMHVIAGKAVALKIAAT 297 (447)
T ss_dssp CCST--TT-CS--EEEEESSGGGC--CCSCEEEEECGGG--------HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTS
T ss_pred CCCC--CC-Cc--EEEecCCcCCC--CCCeEEEEECHHH--------HHHHhhhcCCcccCCccHHHHHHHHHHHHHhhC
Confidence 2221 11 12 78999999884 6788999998877 5555544433332 2333334444444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-----CCeEec-CCCceEEEeecCCC-ChHHHHHHHHHhcCeEee----CCCCCCC
Q 036024 176 EAVHSVVDYYKENTKILIDTLASL-----GIKVYG-GINAPYVWAHFPGR-KSWDVFAEILEKTHITTV----PGSGFGP 244 (272)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~-~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~----~g~~~~~ 244 (272)
.+.++..+++.++++++.+.|.+. |+++.. +..++++|+.+.+. ...+.+.++++++||.+. |+....+
T Consensus 298 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p 377 (447)
T 3h7f_A 298 PEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPP 377 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCC
Confidence 456889999999999999999988 888865 34678889988632 245566777788899998 6643344
Q ss_pred CCCCeEEEEcc------CCHHHHHHHHHHHHHhC
Q 036024 245 GGEEYIRISGF------GHRESILEASRRLEALF 272 (272)
Q Consensus 245 ~~~~~~R~s~~------~~~~~i~~~l~~l~~~l 272 (272)
..++++|++.. .++++++++++.|++++
T Consensus 378 ~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l 411 (447)
T 3h7f_A 378 MVTSGLRIGTPALATRGFGDTEFTEVADIIATAL 411 (447)
T ss_dssp ---CEEEEECHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 45678999852 47899999999998753
No 151
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.89 E-value=3.8e-22 Score=175.86 Aligned_cols=248 Identities=18% Similarity=0.153 Sum_probs=156.0
Q ss_pred cccccCccc-chHHhcccc-eeEEeecCC----C----CCcccCCCCC---------CCceEEEEecCCCcc-ccCCCHH
Q 036024 6 SVIVGQAGD-LEDEVGKYC-NIEYLECGP----G----NNFFPDLKGT---------SRTDIIFFCSPNNPT-GHAATQN 65 (272)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~----~----~~~~~dl~~~---------~~~~~i~~~~p~npt-G~~~~~~ 65 (272)
|++..+++. +...+...| +++.++.+. + .++.+|++.+ +++++|++++||||| |.+++.+
T Consensus 125 viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~ 204 (467)
T 1ax4_A 125 VFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMS 204 (467)
T ss_dssp EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHH
T ss_pred EEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChh
Confidence 555544323 455666677 777766532 1 1234453331 268999999999999 8999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccCCc--c--------ccCCCCCCccccC----CCCCceEEEecCccccCCC-ccceeEEE
Q 036024 66 QLEQLVEFARNNGSIIIFDSAYAA--Y--------VTDGCPRSIYEIP----GAREVAIEISSFSKFSGFT-GVRLGWTV 130 (272)
Q Consensus 66 ~l~~l~~~~~~~~~~vi~D~~~~~--~--------~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~-g~r~G~~~ 130 (272)
++++|+++|++||+++|+|+++.. . .+.+ .++..+. ...+ +++.|+||.+|++ | ||++
T Consensus 205 ~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~ 277 (467)
T 1ax4_A 205 NLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKN--ATIKEVIFDMYKYAD--ALTMSAKKDPLLNIG---GLVA 277 (467)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTT--CCHHHHHHHHGGGCS--EEEEETTSTTCCSSC---EEEE
T ss_pred HHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCC--Cchhhhhhhhccccc--eEEEeccccCCCCcc---eEEE
Confidence 999999999999999999998653 1 1222 2222221 1123 5668999999865 4 6776
Q ss_pred ec-c-cccccCCcchHHHHHhhhhh-----ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 036024 131 VP-E-ELLFSSGFPVINDFNRIICT-----CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV 203 (272)
Q Consensus 131 ~~-~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 203 (272)
.+ + ++ ++.+...... ...+.+...+.++...+..... ++..++..++.+++.+.|++.|+.+
T Consensus 278 ~~d~~~l--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~ 346 (467)
T 1ax4_A 278 IRDNEEI--------FTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLREAGIPI 346 (467)
T ss_dssp ESSCHHH--------HHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred eCCHHHH--------HHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHhCCCCc
Confidence 77 4 45 3333322211 1112333333323323331111 1223334467788899998878888
Q ss_pred ecCCCceEEEee-------cCC--CChHHHHHHHHHhcCeEeeC-CCCC-CC---------CCCCeEEEEcc---CCHHH
Q 036024 204 YGGINAPYVWAH-------FPG--RKSWDVFAEILEKTHITTVP-GSGF-GP---------GGEEYIRISGF---GHRES 260 (272)
Q Consensus 204 ~~~~~~~~~~i~-------l~~--~~~~~~~~~ll~~~gi~v~~-g~~~-~~---------~~~~~~R~s~~---~~~~~ 260 (272)
..+.+++++|+. ++. .+..++...|++++||.+.| |+.+ +. ...+++|+++. .++++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~ 426 (467)
T 1ax4_A 347 QYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDH 426 (467)
T ss_dssp CSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHH
T ss_pred ccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHH
Confidence 777889999999 432 23456777775677999998 5432 11 12479999975 68999
Q ss_pred HHHHHHHHHHh
Q 036024 261 ILEASRRLEAL 271 (272)
Q Consensus 261 i~~~l~~l~~~ 271 (272)
+++++++|+++
T Consensus 427 i~~~~~~l~~~ 437 (467)
T 1ax4_A 427 MDYIADALIGL 437 (467)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 152
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.89 E-value=1.4e-21 Score=168.90 Aligned_cols=246 Identities=14% Similarity=0.110 Sum_probs=162.0
Q ss_pred cccccccCccc-chH-H--hcccc---eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LED-E--VGKYC---NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~-~--~~~~g---~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..+.+. +.. . ....| ++++++++++ ++..|++.+ ++++++++ +|+|+ |...+ +++|
T Consensus 110 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~---l~~i 183 (405)
T 2vi8_A 110 DTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPE-THVIDYDDVREKARLHRPKLIVA-AAAAY-PRIID---FAKF 183 (405)
T ss_dssp CEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCC---HHHH
T ss_pred CEEEEecccccchhcccchhhhccceeEEEecccccc-cCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCC---HHHH
Confidence 56666665544 322 1 12333 5666766533 455664432 26788887 44443 34434 8999
Q ss_pred HHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHh
Q 036024 71 VEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNR 149 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
.++|+++|+++|+||+|........... ..+. ..+ ++++|+||.++ .+| ||+++++++ .+.+..
T Consensus 184 ~~l~~~~~~~li~Dea~~~g~~~~~~~~-~~~~-~~d--i~~~s~sK~~~g~~g---G~~~~~~~~--------~~~l~~ 248 (405)
T 2vi8_A 184 REIADEVGAYLMVDMAHIAGLVAAGLHP-NPVP-YAH--FVTTTTHKTLRGPRG---GMILCQEQF--------AKQIDK 248 (405)
T ss_dssp HHHHHHHTCEEEEECTTTHHHHHTTSSC-CSTT-TCS--EEEEESSSTTCCCSC---EEEEECHHH--------HHHHHH
T ss_pred HHHHHHcCCEEEEEccccccccccCcCC-Cccc-cCC--EEEEeccccCCCCCC---eEEEEcHHH--------HHHHHh
Confidence 9999999999999999984332221111 1111 122 88999999997 555 999998766 455554
Q ss_pred hhhhccCCc-chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecC--CCChHHHH
Q 036024 150 IICTCFNGA-SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFP--GRKSWDVF 225 (272)
Q Consensus 150 ~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~--~~~~~~~~ 225 (272)
.......+. +.....++.+++......++++.+++++++++++.+.|+++|+++..+ ..++++|+.++ +.+..++.
T Consensus 249 ~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (405)
T 2vi8_A 249 AIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAE 328 (405)
T ss_dssp HHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHH
T ss_pred hhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCCCCHHHHH
Confidence 433333233 344444444555432225678899999999999999999989988775 46889999987 33455555
Q ss_pred HHHHHhcCeEeeCCCC----CCCCCCCeEEEEcc------CCHHHHHHHHHHHHHh
Q 036024 226 AEILEKTHITTVPGSG----FGPGGEEYIRISGF------GHRESILEASRRLEAL 271 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~----~~~~~~~~~R~s~~------~~~~~i~~~l~~l~~~ 271 (272)
..| .++||.+.+|.. +++...+++|+++. .+++++++++++|+++
T Consensus 329 ~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 383 (405)
T 2vi8_A 329 KVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLV 383 (405)
T ss_dssp HHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHH
Confidence 555 556999999863 33334578999975 3799999999999875
No 153
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.89 E-value=8.6e-22 Score=171.03 Aligned_cols=224 Identities=17% Similarity=0.143 Sum_probs=148.9
Q ss_pred eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc-cCCCC
Q 036024 24 NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGCP 96 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~-~~~~~ 96 (272)
..++++.+ .++..|++.+ .+++++++++|+||+ ..+ +++|.++|++||+++|+||+|.... ..+..
T Consensus 144 ~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~ 216 (420)
T 3gbx_A 144 NIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVY 216 (420)
T ss_dssp EEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSS
T ss_pred eEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecccC
Confidence 44555555 3445554432 368999999999985 444 8999999999999999999986433 23221
Q ss_pred CCccccCCCCCceEEEecCccccCCCccceeEEEecc---cccccCCcchHHHHHhhhhhc-cCCcchHHHHHHHHhccc
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE---ELLFSSGFPVINDFNRIICTC-FNGASNIAQAGGLACLSS 172 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~ 172 (272)
... .. ...++++|+||.++ |.+.||+++++ ++ .+.+....... ..+++...+.++...+..
T Consensus 217 ~~~--~~---~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ 281 (420)
T 3gbx_A 217 PNP--VP---HAHVVTTTTHKTLA--GPRGGLILAKGGDEEL--------YKKLNSAVFPSAQGGPLMHVIAGKAVALKE 281 (420)
T ss_dssp CCS--TT---TSSEEEEESSGGGC--SCSCEEEEESSCCHHH--------HHHHHHHHC----CCCCHHHHHHHHHHHHH
T ss_pred Ccc--cc---cCCEEEeecccCCC--CCCceEEEEcCCcHHH--------HHHhhhhcCCCCCCCcchhHHHHHHHHHHH
Confidence 211 11 12388999999994 34459999987 34 44444433322 223444444444434433
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCC-CChHHHHHHHHHhcCeEeeC-------CCCCC
Q 036024 173 EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPG-RKSWDVFAEILEKTHITTVP-------GSGFG 243 (272)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~-------g~~~~ 243 (272)
...++.++++++++++++++.+.|.+.|+++..+ ..++++|+.++. ....+.+.++++++||.+.+ +..|+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~ 361 (420)
T 3gbx_A 282 AMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFV 361 (420)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTT
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCC
Confidence 3345668889999999999999999999988764 467889988863 23344555566777999998 33332
Q ss_pred CCCCCeEEEEcc------CCHHHHHHHHHHHHHhC
Q 036024 244 PGGEEYIRISGF------GHRESILEASRRLEALF 272 (272)
Q Consensus 244 ~~~~~~~R~s~~------~~~~~i~~~l~~l~~~l 272 (272)
...+|+++. .++++++++++.|++++
T Consensus 362 ---~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l 393 (420)
T 3gbx_A 362 ---TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVL 393 (420)
T ss_dssp ---CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ---CcceEEecchhcccCCCHHHHHHHHHHHHHHH
Confidence 356999963 35789999999988753
No 154
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=2.8e-21 Score=167.67 Aligned_cols=247 Identities=15% Similarity=0.092 Sum_probs=159.7
Q ss_pred cccccccCccc-chH---Hhcccc---eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024 4 DSSVIVGQAGD-LED---EVGKYC---NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQL 70 (272)
Q Consensus 4 d~~~~~~~~~~-~~~---~~~~~g---~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l 70 (272)
|.|++..+.+. +.. .....| .+++++.+ .++.+|++.+ +++++|++++|+| |..++ +++|
T Consensus 112 d~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~---l~~i 184 (417)
T 3n0l_A 112 DKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVID---FAKF 184 (417)
T ss_dssp CEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCC---HHHH
T ss_pred CEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCC---HHHH
Confidence 56777666443 222 222333 45555565 3555664432 5789999888886 77777 8999
Q ss_pred HHHHHHcCCEEEEcccCC-ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHH
Q 036024 71 VEFARNNGSIIIFDSAYA-AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFN 148 (272)
Q Consensus 71 ~~~~~~~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~ 148 (272)
.++|+++|+++|+|++|. +..+.+....... ...++++|+||.+ +|.|.||+++++ ++ .+.+.
T Consensus 185 ~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~~~~--------~~~~~ 249 (417)
T 3n0l_A 185 REIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTNDEEL--------AKKIN 249 (417)
T ss_dssp HHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESCHHH--------HHHHH
T ss_pred HHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECCHHH--------HHHHh
Confidence 999999999999999975 3333332221111 1238899999988 677889999984 55 45555
Q ss_pred hhhhhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCC-ChHHHH
Q 036024 149 RIICTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGR-KSWDVF 225 (272)
Q Consensus 149 ~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~-~~~~~~ 225 (272)
....... .+++...+.++...+......++++.+++++++++++.+.|.+.|+.+.. +..+.++|+.++.. .+.+.+
T Consensus 250 ~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (417)
T 3n0l_A 250 SAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDA 329 (417)
T ss_dssp HHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTSSSCHHHH
T ss_pred hhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccCCCCceEEEEEcccCCCCHHHH
Confidence 4443322 23344444444444443233556888999999999999999998888765 23567888988632 234445
Q ss_pred HHHHHhcCeEeeCCCCCCC----CCCCeEEEEcc------CCHHHHHHHHHHHHHhC
Q 036024 226 AEILEKTHITTVPGSGFGP----GGEEYIRISGF------GHRESILEASRRLEALF 272 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~----~~~~~~R~s~~------~~~~~i~~~l~~l~~~l 272 (272)
.++++++||.+.++..+.. .....+|+++. .+++++++++++|++++
T Consensus 330 ~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l 386 (417)
T 3n0l_A 330 DLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADIL 386 (417)
T ss_dssp HHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 5566777999987654322 12467999952 36899999999998763
No 155
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.88 E-value=7.1e-22 Score=173.96 Aligned_cols=209 Identities=10% Similarity=0.008 Sum_probs=143.6
Q ss_pred CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++|++..++|++|. +++++.+++|.++|++||+++|+||+|.++...+...........++ +.++||.++ +
T Consensus 220 ~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pd----i~t~sK~l~-g 294 (460)
T 3gju_A 220 ETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPD----LITIAKGLT-S 294 (460)
T ss_dssp GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS----EEEECGGGT-T
T ss_pred CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCC----eeeeehhhc-C
Confidence 34566666666778877 77888899999999999999999999998765543322222322223 336899998 6
Q ss_pred c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILI 193 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~ 193 (272)
| +|+||+++++++ ++.+.. .....+++.+++++.|+.++++.... +..++.++.....++.+.
T Consensus 295 G~~~lg~v~~~~~i--------~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~ 366 (460)
T 3gju_A 295 AYAPLSGVIVADRV--------WQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELA 366 (460)
T ss_dssp TSSCCEEEEEEHHH--------HHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECHHH--------HHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 7 899999999887 555532 23445566888999999888873222 334445555555555555
Q ss_pred HHHHhCC-CeEecCCCceEEEeecCCCC------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCH
Q 036024 194 DTLASLG-IKVYGGINAPYVWAHFPGRK------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHR 258 (272)
Q Consensus 194 ~~L~~~g-~~~~~~~~~~~~~i~l~~~~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~ 258 (272)
+.+.+++ +....+ .|.++++.+.... ..++...++++ ||.+.|+. ..+++||+ +..++
T Consensus 367 ~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~-----~~~~iRi~~~~~~t~ 439 (460)
T 3gju_A 367 KAVGGHKNVGEVRG-DGMLAAVEFVADKDDRVFFDASQKIGPQVATALAAS-GVIGRAMP-----QGDILGFAPPLCLTR 439 (460)
T ss_dssp HHHTTSTTEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECEECS-----SSCEEEECCCTTCCH
T ss_pred HHHhcCCCeEEEee-eeEEEEEEEccCccccccccchHHHHHHHHHHHHHC-CeEEecCC-----CCCEEEEECCCCCCH
Confidence 5555553 444443 4667777775211 33556666655 99999865 25799999 56799
Q ss_pred HHHHHHHHHHHHhC
Q 036024 259 ESILEASRRLEALF 272 (272)
Q Consensus 259 ~~i~~~l~~l~~~l 272 (272)
+++++++++|++++
T Consensus 440 e~i~~~l~~l~~~l 453 (460)
T 3gju_A 440 EQADIVVSKTADAV 453 (460)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998763
No 156
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.88 E-value=9.3e-22 Score=171.67 Aligned_cols=235 Identities=13% Similarity=0.068 Sum_probs=153.5
Q ss_pred hcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC----------CEEE
Q 036024 19 VGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG----------SIII 82 (272)
Q Consensus 19 ~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~----------~~vi 82 (272)
.+..| +++.+|++++ ++.+|++. .++++++++++|+||||.+++ +++|.++|++++ +++|
T Consensus 144 ~~~~g~~v~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~li 219 (432)
T 3a9z_A 144 VEDQVAEVTFVPVSKV-NGQVEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVH 219 (432)
T ss_dssp HHTTSCEEEEECCCTT-TSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred HHhcCcEEEEEecCcc-cCCcCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEE
Confidence 34467 9999998763 23444322 257899999999999999999 677889999998 9999
Q ss_pred EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHH
Q 036024 83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162 (272)
Q Consensus 83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (272)
+|++|..+. .+..+..+. .+ +++.|+||.+| .|+||++++++.....+....-...........+.+...
T Consensus 220 vDea~~~~~---~~~~~~~~~--~d--~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (432)
T 3a9z_A 220 TDAAQALGK---RRVDVEDLG--VD--FLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPM 289 (432)
T ss_dssp EECTTTTTT---SCCCHHHHC--CS--EEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHH
T ss_pred EEchhhhCC---cccChhhcC--CC--EEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHH
Confidence 999997532 122333332 22 66899999876 459999998765111111100000000112233467777
Q ss_pred HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe--cC-----CCceEEEeecCC--CChHHHHHHHHHhc
Q 036024 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY--GG-----INAPYVWAHFPG--RKSWDVFAEILEKT 232 (272)
Q Consensus 163 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~-----~~~~~~~i~l~~--~~~~~~~~~ll~~~ 232 (272)
+.++.+++.. ..+++++.+++++++++++.+.|+++ |+.+. ++ ..+..+++.+++ .+..++...+ .
T Consensus 290 ~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~ 365 (432)
T 3a9z_A 290 IAGLGKAADL-VSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC---Q 365 (432)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC---S
T ss_pred HHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh---c
Confidence 7766666652 22467889999999999999999885 65443 32 123456666653 2343443332 2
Q ss_pred CeEeeCCCCCCCC------------------CCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 233 HITTVPGSGFGPG------------------GEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 233 gi~v~~g~~~~~~------------------~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
++.+.+|..|.+. ..+++|+++.. +++++++++++|+++
T Consensus 366 ~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~ 424 (432)
T 3a9z_A 366 TLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQA 424 (432)
T ss_dssp SEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 7888777665431 13789999754 899999999999875
No 157
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.88 E-value=2.9e-22 Score=175.35 Aligned_cols=206 Identities=14% Similarity=0.162 Sum_probs=141.6
Q ss_pred CCceEEEEecCCCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++++++++++|++|.+.+.+ .+++|.++|++||+++|+||+|.++...+...........++ ++ |+||.+| +
T Consensus 200 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~d-i~---s~sK~~~-~ 274 (439)
T 3dxv_A 200 GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPD-IL---VLGKGLG-G 274 (439)
T ss_dssp TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCS-EE---EECGGGG-T
T ss_pred CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCC-EE---EEcchhc-C
Confidence 4567777777788888876544 499999999999999999999997655443233333322222 22 8999999 7
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+|+||++++++. ++.+.......+. .+++++.++.++++.... ++..++++++.+++++.|.++
T Consensus 275 G~riG~~~~~~~~--------~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~ 342 (439)
T 3dxv_A 275 GLPLSAVIAPAEI--------LDCASAFAMQTLH-GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGLSELAKR 342 (439)
T ss_dssp TSCCEEEEEEHHH--------HTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEECHHH--------HhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998877 3334333334445 788888888888763222 344556666666666666553
Q ss_pred -C-CeEecCCCceEEEeecC--------C-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHH
Q 036024 200 -G-IKVYGGINAPYVWAHFP--------G-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASR 266 (272)
Q Consensus 200 -g-~~~~~~~~~~~~~i~l~--------~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~ 266 (272)
+ +....+ .|.++++.+. . ....++...++++ ||.+.|+..+ .+++|+++ ..++++++++++
T Consensus 343 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iRi~~~~~~t~e~i~~~l~ 416 (439)
T 3dxv_A 343 HPLIGDIRG-RGLACGMELVCDRQSREPARAETAKLIYRAYQL-GLVVYYVGMN----GNVLEFTPPLTITETDIHKALD 416 (439)
T ss_dssp CTTEEEEEE-ETTEEEEEEEEETTTTEECHHHHHHHHHHHHHH-TEECEEESTT----SCEEEECCCTTCCHHHHHHHHH
T ss_pred CCCeEEEEE-EEEEEEEEEecCccccCCCHHHHHHHHHHHHHC-CcEEeecCCC----CCEEEEECCCCCCHHHHHHHHH
Confidence 3 333443 5778888772 1 1234566677766 9999987532 47899974 568999999999
Q ss_pred HHHHhC
Q 036024 267 RLEALF 272 (272)
Q Consensus 267 ~l~~~l 272 (272)
+|++++
T Consensus 417 ~l~~~l 422 (439)
T 3dxv_A 417 LLDRAF 422 (439)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998763
No 158
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.88 E-value=8.7e-22 Score=172.95 Aligned_cols=206 Identities=15% Similarity=0.114 Sum_probs=139.8
Q ss_pred CceEEEEecCCCccc--cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSPNNPTG--HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p~nptG--~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+..+++++.|.|++| ...+++.+++|.++|++||+++|+||+|.++...+...........++ +.|+||.+| +
T Consensus 226 ~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~ 300 (451)
T 3oks_A 226 DNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPD----LIVTAKGIA-G 300 (451)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS----EEEECGGGG-T
T ss_pred CCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCC----eeeehhhhh-C
Confidence 455666667766665 344667799999999999999999999998765554333333322223 238999998 6
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS---- 198 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 198 (272)
|+|+||+++++++ ++.+.......+++.+++++.++.++++.... ++..++++++.+++++.|.+
T Consensus 301 G~~iG~v~~~~~~--------~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 369 (451)
T 3oks_A 301 GLPLSAVTGRAEI--------MDSPHVSGLGGTYGGNPIACAAALATIETIES---EGLVARAQQIEKIMKDRLGRLQAE 369 (451)
T ss_dssp TSSCEEEEEEHHH--------HTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEECHHH--------HhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998887 34444444555666899999988888873222 23445555555555555554
Q ss_pred CC-CeEecCCCceEEEeecCC--------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHH
Q 036024 199 LG-IKVYGGINAPYVWAHFPG--------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRR 267 (272)
Q Consensus 199 ~g-~~~~~~~~~~~~~i~l~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~ 267 (272)
.+ +....+ .|.++|+.+.. ....++...++++ ||.+.|+..| .+++|+++ ..+++++++++++
T Consensus 370 ~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iRi~~~~~~t~e~i~~~l~~ 443 (451)
T 3oks_A 370 DDRIGDVRG-RGAMIAMELVKAGTTEPDADLTKALCAGAHAA-GVIVLSCGTY----GNVVRFLPPLSIGDDLLNEGLDV 443 (451)
T ss_dssp CTTEEEEEE-ETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHT-TEECEEECTT----SCEEEECCCTTCCHHHHHHHHHH
T ss_pred CCCeEEEEE-eeEEEEEEEecCccCCCCHHHHHHHHHHHHhC-CcEEecCCCC----CCEEEEECCCCCCHHHHHHHHHH
Confidence 33 333333 46788887732 1134455566555 9999997654 35899974 5589999999999
Q ss_pred HHHhC
Q 036024 268 LEALF 272 (272)
Q Consensus 268 l~~~l 272 (272)
|++++
T Consensus 444 l~~~l 448 (451)
T 3oks_A 444 LEEVL 448 (451)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 159
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.88 E-value=7.1e-22 Score=172.62 Aligned_cols=204 Identities=15% Similarity=0.148 Sum_probs=136.9
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++++++++.++|++|.+. +++.+++|.++|++||+++|+||+|.++ ..+...........++ +.|+||.+| +|
T Consensus 202 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~d----i~t~sK~~~-~G 275 (434)
T 3l44_A 202 EVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPD----LTALGKVIG-GG 275 (434)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCS----EEEEEGGGG-TT
T ss_pred CEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCC----eeehhhhhc-CC
Confidence 444555555566666655 8888999999999999999999999987 4443222222322233 447999998 89
Q ss_pred cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-- 198 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-- 198 (272)
+|+||++++++. ++.+.. .....+++.+++++.++.++++.... ++..++++++.+++++.|.+
T Consensus 276 ~~iG~~~~~~~i--------~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~ 344 (434)
T 3l44_A 276 LPIGAYGGKKEI--------MEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQA 344 (434)
T ss_dssp SSCEEEEECHHH--------HTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCeeeEEEcHHH--------HHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHH
Confidence 999999988877 333332 22344556888999888888863222 33445556666666666654
Q ss_pred --CCCeEecCCCceEEEeecCCCC--------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHH
Q 036024 199 --LGIKVYGGINAPYVWAHFPGRK--------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL 262 (272)
Q Consensus 199 --~g~~~~~~~~~~~~~i~l~~~~--------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~ 262 (272)
.++....+..|.++++.+.... ..++...++++ ||.+.|+. .+.+|+++..++++++
T Consensus 345 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------~~~~rl~~~~t~e~i~ 417 (434)
T 3l44_A 345 AKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQE-GVNLAPSK------YEAWFLTTEHTKEDIE 417 (434)
T ss_dssp HHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHT-TEECCSST------TCCEECCTTCCHHHHH
T ss_pred HhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHC-CeEEeecC------CCcEEEecccCHHHHH
Confidence 3442222235677777764211 14456666655 99998864 3578999888999999
Q ss_pred HHHHHHHHhC
Q 036024 263 EASRRLEALF 272 (272)
Q Consensus 263 ~~l~~l~~~l 272 (272)
+++++|++++
T Consensus 418 ~~l~~l~~~l 427 (434)
T 3l44_A 418 YTIEAVGRAF 427 (434)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 160
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.88 E-value=2.6e-21 Score=166.57 Aligned_cols=243 Identities=13% Similarity=0.103 Sum_probs=162.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...++..| +++.++++++ ++.+|++. .+++++|+ |+||||.+.+ +++|.++|++
T Consensus 79 d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~la~~ 151 (388)
T 1b9h_A 79 TEVIVPAFTFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKISAD 151 (388)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHHHHH
Confidence 56777766555 777788888 9999999865 45556433 25667666 9999999976 8999999999
Q ss_pred cCCEEEEcccCCcc-ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--
Q 036024 77 NGSIIIFDSAYAAY-VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT-- 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-- 153 (272)
+|+++|+|++|..+ .+.+ ..+..+. .+.+.||||..+++|.|+||++++++.+.. .+.+......
T Consensus 152 ~~~~li~D~a~~~g~~~~~--~~~~~~~-----~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~-----~~~~~~~~~~~~ 219 (388)
T 1b9h_A 152 TGVPLLQDAAHAHGARWQG--KRVGELD-----SIATFSFQNGKLMTAGEGGAVVFPDGETEK-----YETAFLRHSCGR 219 (388)
T ss_dssp HTCCBCEECTTCTTCEETT--EEGGGSS-----SCEEEECCTTSSSCSSSCEEEEECTTCHHH-----HHHHHHHTBTTC
T ss_pred cCCEEEEecchhcCCccCC--eeccccc-----ceEEEEccCCCcccCCCeEEEEECCHHHHH-----HHHHHHHHhCCC
Confidence 99999999999853 3322 2222221 378889997666666799999998764200 1222211110
Q ss_pred -------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec------CCCceEEE
Q 036024 154 -------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG------GINAPYVW 213 (272)
Q Consensus 154 -------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~------~~~~~~~~ 213 (272)
+....+.+...++.. ..+++++..++++++++++.+.|+++ |+.+.. +..++++|
T Consensus 220 ~~~~~~~~~~~~g~~~~~~~~~~a~~~~-----~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 294 (388)
T 1b9h_A 220 PRDDRRYFHKIAGSNMRLNEFSASVLRA-----QLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAM 294 (388)
T ss_dssp CTTCSSCCCCSCCCBCBCBHHHHHHHHH-----HHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEE
T ss_pred CccCccceeecccccCCcCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEE
Confidence 111123332222211 12445678888999999999999987 888765 34578999
Q ss_pred eecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCC---------------------------CCeEEEEc--cC-CHHH
Q 036024 214 AHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGG---------------------------EEYIRISG--FG-HRES 260 (272)
Q Consensus 214 i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~---------------------------~~~~R~s~--~~-~~~~ 260 (272)
+.+++. +..++...|.+ +||.+.++....... .+.+|+++ .. +++|
T Consensus 295 ~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~ed 373 (388)
T 1b9h_A 295 FRIPGLTEERRNALVDRLVE-AGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPE 373 (388)
T ss_dssp EECTTCCHHHHHHHHHHHHH-TTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHH
T ss_pred EEeCCcCcccHHHHHHHHHH-CCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHH
Confidence 999864 34556666665 599998765321000 13589997 35 8999
Q ss_pred HHHHHHHHHHh
Q 036024 261 ILEASRRLEAL 271 (272)
Q Consensus 261 i~~~l~~l~~~ 271 (272)
++++++.|+++
T Consensus 374 i~~~~~~l~~~ 384 (388)
T 1b9h_A 374 LHATAEIIADA 384 (388)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 161
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.88 E-value=7.6e-22 Score=173.41 Aligned_cols=207 Identities=15% Similarity=0.123 Sum_probs=141.6
Q ss_pred CCceEEEEecCCCccc--cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSPNNPTG--HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG--~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
++..+++++.|+|++| ...+++.+++|.++|++||+++|+||+|.++...+...........++ +.||||.++
T Consensus 223 ~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pd----i~t~sK~~~- 297 (453)
T 4ffc_A 223 AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPD----IVTMAKGIA- 297 (453)
T ss_dssp GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS----EEEECGGGG-
T ss_pred CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcc----hHhhhhhhc-
Confidence 4556777778877777 444778899999999999999999999998765553333333322222 447899998
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh---
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--- 198 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--- 198 (272)
+|+|+||+++++++ ++.+.......+++.+++++.++.++++.... ++..++++++.+++++.|.+
T Consensus 298 ~G~~~G~~~~~~~i--------~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 366 (453)
T 4ffc_A 298 GGMPLSAVTGRAEL--------MDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE---LDLPARARAIEASVTSRLSALAE 366 (453)
T ss_dssp TTSSCEEEEEEHHH--------HTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCeEEEEECHHH--------HhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHh
Confidence 59999999998887 44444444556666889999988888873222 23444555555555555544
Q ss_pred -CC-CeEecCCCceEEEeecCC--------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHH
Q 036024 199 -LG-IKVYGGINAPYVWAHFPG--------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASR 266 (272)
Q Consensus 199 -~g-~~~~~~~~~~~~~i~l~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~ 266 (272)
++ +....+ .|.++|+.+.. ....++...++++ ||.+.|+..| .+++|+++ ..++++++++++
T Consensus 367 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iRi~~~~~~t~e~i~~~l~ 440 (453)
T 4ffc_A 367 EVDIIGEVRG-RGAMLAIEIVKPGTLEPDAALTKSIAAEALSQ-GVLILTCGTF----GNVIRLLPPLVIGDDLLDEGIT 440 (453)
T ss_dssp HCSSEEEEEE-ETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECCEECTT----SCEEEECCCTTCCHHHHHHHHH
T ss_pred hCCCeEEEEe-eceEEEEEEecCcccCCCHHHHHHHHHHHHhC-CCEEecCCCC----CCEEEEECCCCCCHHHHHHHHH
Confidence 33 333333 57788887732 1134455566555 9999987654 36889974 558999999999
Q ss_pred HHHHhC
Q 036024 267 RLEALF 272 (272)
Q Consensus 267 ~l~~~l 272 (272)
+|++++
T Consensus 441 ~l~~~l 446 (453)
T 4ffc_A 441 ALSDII 446 (453)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998763
No 162
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.87 E-value=4.4e-21 Score=169.79 Aligned_cols=232 Identities=17% Similarity=0.163 Sum_probs=155.4
Q ss_pred eEEeec--CCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCC
Q 036024 25 IEYLEC--GPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGC 95 (272)
Q Consensus 25 ~~~~~~--~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~ 95 (272)
+..++. +++ ++.+|++++ +++|+|++ +++||+ .+++ +++|.++|+++|+++++|++|. ++...+.
T Consensus 166 ~~~v~~~~~~~-~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~ 239 (483)
T 1rv3_A 166 FESMAYKVNPD-TGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGV 239 (483)
T ss_dssp SEEEEECBCTT-TCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTS
T ss_pred EEEEECccccC-CCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCC
Confidence 455554 544 566674441 68999999 899998 7777 8999999999999999999987 3333332
Q ss_pred CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc-------chHHHHHhhhhh-ccCCcchHHHHHHH
Q 036024 96 PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF-------PVINDFNRIICT-CFNGASNIAQAGGL 167 (272)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~a~~ 167 (272)
...... + . .++++|+||++ +|.|.||++++++...-... .+...+...... ...+++...+.+..
T Consensus 240 ~~~p~~--~-~--div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~ 312 (483)
T 1rv3_A 240 VPSPFE--H-C--HVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVA 312 (483)
T ss_dssp SCCGGG--T-C--SEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHH
T ss_pred CCCCCC--C-C--cEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHH
Confidence 222111 1 1 28889999987 46788999998864210000 112233222211 12334444455545
Q ss_pred HhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEEeecC--CCChHHHHHHHHHhcCeEee----CCC
Q 036024 168 ACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVWAHFP--GRKSWDVFAEILEKTHITTV----PGS 240 (272)
Q Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v~----~g~ 240 (272)
.++......++++..++++++++++.+.|.++|+++..+. +..++|+.+. +.+..+ +.++|++.||.+. ||.
T Consensus 313 ~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~-~~~~L~~~gI~v~~~~~pg~ 391 (483)
T 1rv3_A 313 VALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGR-AEKVLEACSIACNKNTCPGD 391 (483)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHH-HHHHHHHTTEECEEECCSSC
T ss_pred HHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCCCCHHH-HHHHHHhCCcEEecCCCCCC
Confidence 5554333345688899999999999999999999987753 3467888886 334545 4556677899999 887
Q ss_pred CCCCCCCCeEEEEccC--C----HHHHHHHHHHHHHh
Q 036024 241 GFGPGGEEYIRISGFG--H----RESILEASRRLEAL 271 (272)
Q Consensus 241 ~~~~~~~~~~R~s~~~--~----~~~i~~~l~~l~~~ 271 (272)
.+ +-+.+++|+++.. + ++|+++++++|+++
T Consensus 392 ~~-~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~ 427 (483)
T 1rv3_A 392 KS-ALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRG 427 (483)
T ss_dssp SC-TTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred Cc-CCCCceEEeecCCcccCCCCHHHHHHHHHHHHHH
Confidence 43 2246799999742 5 89999999998875
No 163
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.87 E-value=2.7e-20 Score=160.23 Aligned_cols=236 Identities=14% Similarity=0.195 Sum_probs=157.5
Q ss_pred cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74 (272)
Q Consensus 4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~ 74 (272)
|.|++..+.+. ... .++..| +++.++.+. ++ +++ .++++++++++|+||||.+++ +++|.++|
T Consensus 92 ~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d-----~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 163 (386)
T 1cs1_A 92 DLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGD-----EQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLA 163 (386)
T ss_dssp CEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTC-----HHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHH
T ss_pred CEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCC-----HHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHH
Confidence 45666665444 222 236677 888888741 11 221 157899999999999999987 89999999
Q ss_pred HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecc-cccccCCcchHHHHHhhhh
Q 036024 75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPE-ELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~-~~~~~~~~~~~~~~~~~~~ 152 (272)
+++|+++|+||+|..+.... ++ .. ++.+++.|+||.+|.+|.|+ ||+++++ ++ .+.+.....
T Consensus 164 ~~~~~~li~De~~~~~~~~~---~~-~~----~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l--------~~~l~~~~~ 227 (386)
T 1cs1_A 164 REVGAVSVVDNTFLSPALQN---PL-AL----GADLVLHSCTKYLNGHSDVVAGVVIAKDPDV--------VTELAWWAN 227 (386)
T ss_dssp HHTTCEEEEECTTTCTTTCC---GG-GG----TCSEEEEETTTTTTCSSCCCCEEEEESSHHH--------HHHHHHHHH
T ss_pred HHcCCEEEEECCCcccccCC---cc-cc----CceEEEEcCcccccCCCCceeEEEEeCcHHH--------HHHHHHHHH
Confidence 99999999999998765431 22 22 34599999999998888887 9999987 55 555555554
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEe-cC----------------CCceEEEe
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVY-GG----------------INAPYVWA 214 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~-~~----------------~~~~~~~i 214 (272)
....+.+...+.++.+.++ ++.+..+...++.+.+.+.|++++ +.-. .+ ..+.++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 302 (386)
T 1cs1_A 228 NIGVTGGAFDSYLLLRGLR-----TLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSF 302 (386)
T ss_dssp HHTCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE
T ss_pred hcCCCCCHHHHHHHHhccc-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEE
Confidence 4334466676666555543 235566778888888888888762 2211 11 12667777
Q ss_pred ecCCCChHHHHHHHHHhcCeEeeCCCCCC-----------------C--------CCCCeEEEEccC--CHHHHHHHHHH
Q 036024 215 HFPGRKSWDVFAEILEKTHITTVPGSGFG-----------------P--------GGEEYIRISGFG--HRESILEASRR 267 (272)
Q Consensus 215 ~l~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------------~--------~~~~~~R~s~~~--~~~~i~~~l~~ 267 (272)
.+++. . +.....+++.||.+.+.+ ++ + ...+++|+|+.. ++++++.+.+.
T Consensus 303 ~~~~~-~-~~~~~~l~~~gi~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~a 379 (386)
T 1cs1_A 303 ELDGD-E-QTLRRFLGGLSLFTLAES-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENG 379 (386)
T ss_dssp EESSC-H-HHHHHHHHTCSSSEEBSC-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred EECCC-H-HHHHHHHHhCCcceEccc-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHH
Confidence 77653 3 444555667799887421 11 0 125899999743 56677777777
Q ss_pred HHHh
Q 036024 268 LEAL 271 (272)
Q Consensus 268 l~~~ 271 (272)
|+++
T Consensus 380 l~~~ 383 (386)
T 1cs1_A 380 FRAA 383 (386)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 164
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.87 E-value=4.7e-21 Score=168.90 Aligned_cols=246 Identities=12% Similarity=0.073 Sum_probs=163.0
Q ss_pred cccccCccc-----chHHhcccc-ee----E-EeecCCCCCcccCCCC----C----CCceEEEEecCCCccccCCCHHH
Q 036024 6 SVIVGQAGD-----LEDEVGKYC-NI----E-YLECGPGNNFFPDLKG----T----SRTDIIFFCSPNNPTGHAATQNQ 66 (272)
Q Consensus 6 ~~~~~~~~~-----~~~~~~~~g-~~----~-~~~~~~~~~~~~dl~~----~----~~~~~i~~~~p~nptG~~~~~~~ 66 (272)
|++..+.+. +...++..| ++ + ..|.+ +++.+|++. + ++++++++++||||||.+++
T Consensus 158 Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~--~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~--- 232 (465)
T 3e9k_A 158 ILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPRE--GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN--- 232 (465)
T ss_dssp EEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCT--TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC---
T ss_pred EEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCC--CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeec---
Confidence 666665543 223455567 54 2 23333 244455332 1 57899999999999999998
Q ss_pred HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHH
Q 036024 67 LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVIN 145 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~ 145 (272)
+++|.++|+++|+++++|++|+... .+..+..+. ..+++.|++|.++ .|+ ++|+++++++......+.+..
T Consensus 233 l~~i~~la~~~g~~vi~D~a~~~g~---~~~~~~~~~----~D~~~~s~~K~l~~gp~-~~g~l~~~~~~~~~~~~~~~g 304 (465)
T 3e9k_A 233 IPAITKAGQAKGCYVGFDLAHAVGN---VELYLHDWG----VDFACWCSYKYLNAGAG-GIAGAFIHEKHAHTIKPALVG 304 (465)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTT---SCCCHHHHT----CCEEEECSSSTTCCCTT-CCCEEEECGGGTTTSCCSSCC
T ss_pred HHHHHHHHHHcCCEEEEEhhhhcCC---cCCchhhcC----CCEEEECcccccccCCC-ceEEEEEcHHHHhhcCCcccC
Confidence 7889999999999999999997522 122333332 2288999999993 243 689999988775432221111
Q ss_pred HHHh-----h------------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----------
Q 036024 146 DFNR-----I------------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS---------- 198 (272)
Q Consensus 146 ~~~~-----~------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---------- 198 (272)
.+.. + ......+++.....++.+.+.......+++++++++++++++.+.|++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 384 (465)
T 3e9k_A 305 WFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATK 384 (465)
T ss_dssp GGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred ccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccC
Confidence 0000 0 001112456666665566555322234688999999999999999988
Q ss_pred -CCCeEecCC----CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHH
Q 036024 199 -LGIKVYGGI----NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEA 270 (272)
Q Consensus 199 -~g~~~~~~~----~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~ 270 (272)
.|+++..+. .+.++++.++ .+..++...|.++ ||.+... .++++|+++ +++++|++++++.|++
T Consensus 385 ~~g~~~~~p~~~~~~g~~~~~~~~-~~~~~l~~~L~~~-Gi~v~~~------~~~~iRis~~~~~~t~edi~~~~~~l~~ 456 (465)
T 3e9k_A 385 KPVVNIITPSHVEERGCQLTITFS-VPNKDVFQELEKR-GVVCDKR------NPNGIRVAPVPLYNSFHDVYKFTNLLTS 456 (465)
T ss_dssp --CEEECSCSSGGGBCSCEEEEEC-CTTCCHHHHHHTT-TEECEEE------TTTEEEEBCCTTTCCHHHHHHHHHHHHH
T ss_pred CCCeEEeCCCCHhhcccEEEEEec-CCHHHHHHHHHHC-CEEEecC------CCCEEEEeCcccCCCHHHHHHHHHHHHH
Confidence 588888765 2778888887 3445667776665 9998632 258999985 4589999999999987
Q ss_pred hC
Q 036024 271 LF 272 (272)
Q Consensus 271 ~l 272 (272)
++
T Consensus 457 ~l 458 (465)
T 3e9k_A 457 IL 458 (465)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 165
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.87 E-value=1.8e-21 Score=171.14 Aligned_cols=204 Identities=11% Similarity=0.021 Sum_probs=148.6
Q ss_pred CCceEEEEec-CCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCS-PNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~-p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 121 (272)
++++++++.. ++||+|.++ +++.+++|.++|++||+++|+||+|.++...+...........++ ++ |+||.++
T Consensus 232 ~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pd-ii---t~sK~l~- 306 (457)
T 3tfu_A 232 GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPD-IM---CVGKALT- 306 (457)
T ss_dssp GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS-EE---EECGGGG-
T ss_pred CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCce-EE---EEChhhh-
Confidence 4567777777 799999877 778899999999999999999999998765554333333333333 22 8999997
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHHh-----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFNR-----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (272)
.| +|+||++++++. .+.+.. +....+++.+++++.++.+.++.... +...++++++.+++++.
T Consensus 307 gG~~~lG~v~~~~~i--------~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~~~~~l~~~ 375 (457)
T 3tfu_A 307 GGYLSLAATLCTADV--------AHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITELAAGLTAG 375 (457)
T ss_dssp TTSSCCEEEEEEHHH--------HHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEEcHHH--------HHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHH
Confidence 56 699999999888 555531 13335556888999888888863211 24567777888888888
Q ss_pred HHhC----CCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHH
Q 036024 196 LASL----GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRL 268 (272)
Q Consensus 196 L~~~----g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l 268 (272)
|+++ ++....+ .|.++++.++. .+..++...++++ ||.+.|. .+++|++ +..+++++++++++|
T Consensus 376 L~~l~~~~~v~~vr~-~G~~~~i~l~~~~~~~~~~~~l~~~-Gv~v~~~-------~~~lRi~p~~~~t~eei~~~l~~L 446 (457)
T 3tfu_A 376 LDTARALPAVTDVRV-CGAIGVIECDRPVDLAVATPAALDR-GVWLRPF-------RNLVYAMPPYICTPAEITQITSAM 446 (457)
T ss_dssp HGGGGGSTTEEEEEE-CSSCEEEEESSCCCHHHHHHHHHHT-TEECCCB-------TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHhcCCCeeeeec-CCeEEEEEECCcccHHHHHHHHHHC-CeEEEec-------CCEEEEECCCCCCHHHHHHHHHHH
Confidence 8765 3333333 57788888874 3456777777766 9999873 2589998 456999999999999
Q ss_pred HHhC
Q 036024 269 EALF 272 (272)
Q Consensus 269 ~~~l 272 (272)
++++
T Consensus 447 ~~~l 450 (457)
T 3tfu_A 447 VEVA 450 (457)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 166
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.87 E-value=2.7e-21 Score=169.69 Aligned_cols=203 Identities=15% Similarity=0.081 Sum_probs=138.2
Q ss_pred CceEEEEecCC-Cccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSPN-NPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p~-nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++++|++..++ |++| .+++++.+++|.++|++||+++|+||+|.++...+...........++ +.++||.++ +
T Consensus 210 ~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~d----i~t~sK~l~-~ 284 (448)
T 3dod_A 210 EIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPD----LMAAGKGIT-G 284 (448)
T ss_dssp GEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS----EEEECGGGG-T
T ss_pred CEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCC----EEEeccccc-C
Confidence 45556665555 7887 556778899999999999999999999998765554332333322223 337899998 6
Q ss_pred c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 194 (272)
| +|+||+++++++ ++.+.. .....+++.+++++.++.++++.... ++..++++++.+++++
T Consensus 285 G~~~ig~v~~~~~~--------~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~ 353 (448)
T 3dod_A 285 GYLPIAVTFATEDI--------YKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES---ENIVEQVAEKSKKLHF 353 (448)
T ss_dssp TSSCCEEEEEEHHH--------HHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred CcCceEEEEECHHH--------HHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHH
Confidence 9 599999999887 444443 33445556788999988888873222 2334455555555555
Q ss_pred HHHh---CC-CeEecCCCceEEEeecCCCC------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024 195 TLAS---LG-IKVYGGINAPYVWAHFPGRK------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG 256 (272)
Q Consensus 195 ~L~~---~g-~~~~~~~~~~~~~i~l~~~~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~ 256 (272)
.|.+ .+ +.... ..|.++|+.++... ..++...++++ ||.+.|+ .+++|++ +..
T Consensus 354 ~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-------~~~iRi~~~~~~ 424 (448)
T 3dod_A 354 LLQDLHALPHVGDIR-QLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMREL-GMLTRPL-------GDVIAFLPPLAS 424 (448)
T ss_dssp HHHHHTTSTTEEEEE-EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECCEE-------TTEEEECCCTTC
T ss_pred HHHHHhcCCCeEEEE-eeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHC-CcEEecc-------CCEEEEECCCCC
Confidence 5544 33 22233 25678888886321 25667777766 9999876 2689995 567
Q ss_pred CHHHHHHHHHHHHHhC
Q 036024 257 HRESILEASRRLEALF 272 (272)
Q Consensus 257 ~~~~i~~~l~~l~~~l 272 (272)
+++++++++++|++++
T Consensus 425 t~e~i~~~l~~l~~~l 440 (448)
T 3dod_A 425 TAEELSEMVAIMKQAI 440 (448)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998763
No 167
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.87 E-value=7.2e-21 Score=163.94 Aligned_cols=237 Identities=15% Similarity=0.089 Sum_probs=160.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...++..| +++.++++++ ++.+|++. .+++++++++ ||||...+ +++|.++|++
T Consensus 80 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~ 152 (393)
T 1mdo_A 80 DEVITPSMTWVSTLNMIVLLGANPVMVDVDRD-TLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD---LDAIYALGER 152 (393)
T ss_dssp CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---HHHHHHHHHH
T ss_pred CEEEeCCCccHhHHHHHHHCCCEEEEEeccCC-cCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---HHHHHHHHHH
Confidence 56677666555 777778888 9999999865 55566433 2578888875 48999876 8999999999
Q ss_pred cCCEEEEcccCCcc-ccCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEec-ccccccCCcchHHHHHhhhh
Q 036024 77 NGSIIIFDSAYAAY-VTDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 77 ~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~ 152 (272)
+|+++|+|++|..+ .+.+. + +. . ..+++.|+| |.++ |.|+||++.+ +++ .+.+.....
T Consensus 153 ~~~~li~D~a~~~g~~~~~~--~---~~-~--~d~~~~S~~k~K~l~--~~~~g~~~~~~~~~--------~~~l~~~~~ 214 (393)
T 1mdo_A 153 YGIPVIEDAAHATGTSYKGR--H---IG-A--RGTAIFSFHAIKNIT--CAEGGIVVTDNPQF--------ADKLRSLKF 214 (393)
T ss_dssp HTCCBCEECTTCTTCEETTE--E---TT-S--SSEEEEECCTTSSSC--SSSCEEEEESCHHH--------HHHHHHHTB
T ss_pred cCCeEEEECccccCCeECCe--e---cC-C--CCeEEEeCCCCCccc--cccceEEEeCCHHH--------HHHHHHHHh
Confidence 99999999999853 33321 1 11 1 348899999 6664 4589999987 455 333333221
Q ss_pred hcc------------------------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-C-
Q 036024 153 TCF------------------------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-G- 206 (272)
Q Consensus 153 ~~~------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~- 206 (272)
... ...+.+...++...+ +.+++..++.+++++++.+.|.++++++.. +
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l-----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 289 (393)
T 1mdo_A 215 HGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL-----QKLDALNARRAAIAAQYHQAMADLPFQPLSLPS 289 (393)
T ss_dssp TTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCS
T ss_pred cCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCcccccCCC
Confidence 110 112333333222222 234566777778899999999988877653 2
Q ss_pred ----CCceEEEeecC----CCChHHHHHHHHHhcCeEeeCCCCCC---------------CC----CCCeEEEEcc--CC
Q 036024 207 ----INAPYVWAHFP----GRKSWDVFAEILEKTHITTVPGSGFG---------------PG----GEEYIRISGF--GH 257 (272)
Q Consensus 207 ----~~~~~~~i~l~----~~~~~~~~~~ll~~~gi~v~~g~~~~---------------~~----~~~~~R~s~~--~~ 257 (272)
..++++|+.++ +.+..++...|.+ +||.+.+|..+. +. ..+.+|+++. .+
T Consensus 290 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t 368 (393)
T 1mdo_A 290 WEHIHAWHLFIIRVDEARCGITRDALMASLKT-KGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMT 368 (393)
T ss_dssp SCEECCCSCEEEECCHHHHSSCHHHHHHHHHH-TTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCC
T ss_pred CCCCceeEEEEEEecccccccCHHHHHHHHHh-CCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCC
Confidence 34567899987 4566666666665 599999887541 00 1347999975 59
Q ss_pred HHHHHHHHHHHHHh
Q 036024 258 RESILEASRRLEAL 271 (272)
Q Consensus 258 ~~~i~~~l~~l~~~ 271 (272)
++|+++++++|+++
T Consensus 369 ~~~i~~~~~~l~~~ 382 (393)
T 1mdo_A 369 ESDFDRVITALHQI 382 (393)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 168
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.86 E-value=1.7e-21 Score=169.82 Aligned_cols=204 Identities=16% Similarity=0.143 Sum_probs=138.3
Q ss_pred CceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++++++++.++|++|.+.+ ++.+++|.++|++||+++|+||+|.++ ..+...........++ +.|+||.+| +|
T Consensus 199 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d----i~t~sK~~~-~G 272 (427)
T 3fq8_A 199 EIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPD----LTTLGKIIG-GG 272 (427)
T ss_dssp TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCS----EEEECGGGG-TT
T ss_pred CEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCCCCC----hhhhhhhhh-CC
Confidence 5677777777788887766 555999999999999999999999987 4442222222222222 458899999 89
Q ss_pred cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-- 198 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-- 198 (272)
+|+||++++++.+ +.+.. .....+.+.+++++.++.++++.... ++..++++++.+++++.|.+
T Consensus 273 ~~~G~~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~ 341 (427)
T 3fq8_A 273 LPVGAYGGKREIM--------QLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIA 341 (427)
T ss_dssp SSCEEEEECHHHH--------TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEcHHHH--------HhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988773 33332 12334445688888888888863221 23455566666666666654
Q ss_pred --CCCeEecCCCceEEEeecCCC--C------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHH
Q 036024 199 --LGIKVYGGINAPYVWAHFPGR--K------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL 262 (272)
Q Consensus 199 --~g~~~~~~~~~~~~~i~l~~~--~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~ 262 (272)
.++.......+.++|+.+... . ..++...++++ ||.+.|+. ...+|+++..++++++
T Consensus 342 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~~------~~r~~~~~~~t~e~i~ 414 (427)
T 3fq8_A 342 QETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ-GIYLAPSQ------FEAGFTSLAHTEEDID 414 (427)
T ss_dssp HHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST------TSCEECCTTCCHHHHH
T ss_pred HhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHC-CcEEecCC------CCCEEeeCcCCHHHHH
Confidence 344333334577888888632 1 23566666655 99998865 2357777778999999
Q ss_pred HHHHHHHHhC
Q 036024 263 EASRRLEALF 272 (272)
Q Consensus 263 ~~l~~l~~~l 272 (272)
+++++|++++
T Consensus 415 ~~l~~l~~~l 424 (427)
T 3fq8_A 415 ATLAAARTVM 424 (427)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 169
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.86 E-value=6.9e-21 Score=164.30 Aligned_cols=241 Identities=13% Similarity=0.092 Sum_probs=155.0
Q ss_pred cccccccCccc-c-h---HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-L-E---DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~-~---~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. . . ..++..| +++.+|.+. ..+.--++ +++++|++++|+||||.+++ +++|+++|+++
T Consensus 94 d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~--~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~ 167 (393)
T 1n8p_A 94 SHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIK--ENTKLVWIETPTNPTLKVTD---IQKVADLIKKH 167 (393)
T ss_dssp CEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSC--SSEEEEEECSSCTTTCCCCC---HHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcc--cCceEEEEECCCCCcceecC---HHHHHHHHHHh
Confidence 55666665443 1 1 2456678 999998752 11111122 57899999999999999997 89999999999
Q ss_pred ----CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEec-ccccccCCcchHHHHHhhh
Q 036024 78 ----GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVP-EELLFSSGFPVINDFNRII 151 (272)
Q Consensus 78 ----~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (272)
|+++|+|++|..+... .+..+ +..+++.|+||.+|.+|+|+ ||++++ +++ .+.+....
T Consensus 168 ~~~~~~~livD~a~~~~~~~----~~~~~----~~di~~~S~sK~~g~~G~rigG~~~~~~~~~--------~~~l~~~~ 231 (393)
T 1n8p_A 168 AAGQDVILVVDNTFLSPYIS----NPLNF----GADIVVHSATKYINGHSDVVLGVLATNNKPL--------YERLQFLQ 231 (393)
T ss_dssp TTTTTCEEEEECTTTHHHHC----CGGGG----TCSEEEEETTTTTTCSSCCCCEEEEESCHHH--------HHHHHHHH
T ss_pred CCCCCCEEEEeCCccccccC----CHHHc----CCeEEEEECcccccCCCCceeEEEEeCCHHH--------HHHHHHHH
Confidence 9999999999976653 12222 23499999999999889999 999885 455 45555444
Q ss_pred hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--Ce-EecC----------------C-C-ce
Q 036024 152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG--IK-VYGG----------------I-N-AP 210 (272)
Q Consensus 152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~----------------~-~-~~ 210 (272)
.......+.....++...++ .+....++..++.+.+.+.|.+.+ +. +..+ . . +.
T Consensus 232 ~~~g~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~ 306 (393)
T 1n8p_A 232 NAIGAIPSPFDAWLTHRGLK-----TLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGG 306 (393)
T ss_dssp HHHCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCS
T ss_pred HhcCCCCCHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCcc
Confidence 33333345555544444443 235566777788888888888763 32 2111 1 2 66
Q ss_pred EEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-------C--------------CCCCeEEEEcc--CCHHHHHHHHH
Q 036024 211 YVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-------P--------------GGEEYIRISGF--GHRESILEASR 266 (272)
Q Consensus 211 ~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-------~--------------~~~~~~R~s~~--~~~~~i~~~l~ 266 (272)
++++.+++. ...+.+...++..++.+..|+.+. + ...+.+|+|++ +++++++.+.+
T Consensus 307 i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~ 386 (393)
T 1n8p_A 307 MISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQ 386 (393)
T ss_dssp EEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHH
Confidence 888999752 112222222333355655554322 0 11478999974 46777888888
Q ss_pred HHHHh
Q 036024 267 RLEAL 271 (272)
Q Consensus 267 ~l~~~ 271 (272)
+|+++
T Consensus 387 al~~~ 391 (393)
T 1n8p_A 387 ALKQA 391 (393)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87764
No 170
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1e-20 Score=164.17 Aligned_cols=241 Identities=15% Similarity=0.114 Sum_probs=153.9
Q ss_pred cccccccCccc-chHHhc----ccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEVG----KYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~----~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+. ..| +++.++.+.-..+.--+ .+++++|++++|+||||.+.+ +++|+++|+++
T Consensus 121 d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai--~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~ 195 (414)
T 3ndn_A 121 DRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERAL--SVPTQAVFFETPSNPMQSLVD---IAAVTELAHAA 195 (414)
T ss_dssp CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHT--SSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHT
T ss_pred CEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccc---HHHHHHHHHHc
Confidence 56666665554 444443 378 99999886111111102 267899999999999999977 88999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFN 156 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
|+++|+|++|....... ++ .. +..+++.|+||.+|.+| +++|+++++++.+. ..+.........
T Consensus 196 g~~livDe~~~~~~~~~---~~-~~----g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~-------~~l~~~~~~~g~ 260 (414)
T 3ndn_A 196 GAKVVLDNVFATPLLQQ---GF-PL----GVDVVVYSGTKHIDGQGRVLGGAILGDREYID-------GPVQKLMRHTGP 260 (414)
T ss_dssp TCEEEEECTTTHHHHCC---CG-GG----TCSEEEEETTTTTTCSSCCCCEEEEECHHHHT-------THHHHHHHHHCC
T ss_pred CCEEEEECCCcccccCC---ch-hc----CCCeEeccCCccccCCCCceEEEEEECHHHHH-------HHHHHHHHHcCC
Confidence 99999999998433221 12 22 12388999999998768 89999999887732 133333333333
Q ss_pred CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCC----------------CceEEEeecCC
Q 036024 157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGI----------------NAPYVWAHFPG 218 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~i~l~~ 218 (272)
..+.....++...+ +.+..+.++..++++.+.+.|++. ++. +..|. .|.++++.+++
T Consensus 261 ~~~~~~a~~~~~~l-----~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~ 335 (414)
T 3ndn_A 261 AMSAFNAWVLLKGL-----ETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDC 335 (414)
T ss_dssp CCCHHHHHHHHHHG-----GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECS
T ss_pred CCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcC
Confidence 34444433333332 334566778889999999999886 433 32221 46789999975
Q ss_pred C-----ChHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 219 R-----KSWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 219 ~-----~~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
. .....+...++..++.+..|..++. ..++.+|+|+.. |+.+.+++.|+++
T Consensus 336 ~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~a 412 (414)
T 3ndn_A 336 PEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRA 412 (414)
T ss_dssp CGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHH
T ss_pred CccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHh
Confidence 2 1223333444555788887775531 136789999864 3344445555544
No 171
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.86 E-value=9.3e-22 Score=171.90 Aligned_cols=204 Identities=17% Similarity=0.159 Sum_probs=139.9
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++++|+++..+||||.++ +++.+++|.++|++||+++|+||+|.++ ..+...........++ +.|+||.+| +|
T Consensus 203 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d----i~s~sK~l~-~G 276 (434)
T 2epj_A 203 RIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNIEGD----IIVLGKIIG-GG 276 (434)
T ss_dssp GEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCS----EEEEEGGGG-TT
T ss_pred CEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCCCCC----eeeecchhc-CC
Confidence 555665555567899876 6999999999999999999999999976 3232111112221223 348999998 59
Q ss_pred cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 199 (272)
+|+||++++++.+ +.+.. .....+++.+++++.++.++++.... ++..++++++.+++++.|+++
T Consensus 277 ~~~G~v~~~~~~~--------~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~ 345 (434)
T 2epj_A 277 FPVGAVAGSREVM--------SLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVL 345 (434)
T ss_dssp SSCEEEEECHHHH--------TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeeecHHHH--------HhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998773 33322 11223445788888888777763221 345677778888888888764
Q ss_pred ---CCeEecCCCceEEEeecCCC--------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHH
Q 036024 200 ---GIKVYGGINAPYVWAHFPGR--------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL 262 (272)
Q Consensus 200 ---g~~~~~~~~~~~~~i~l~~~--------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~ 262 (272)
++....+..|.++|+.++.. ...++...|+++ ||.+.|+. ...+|+++..++++++
T Consensus 346 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------~~~~~~~~~~t~e~i~ 418 (434)
T 2epj_A 346 DRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRR-GVFIAPSN------LEAVFTGLPHQGEALE 418 (434)
T ss_dssp HHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST------TSCEECCTTCSHHHHH
T ss_pred hhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHC-CeEEeccC------CCcEEEeccCCHHHHH
Confidence 55322223577889988641 134566666654 99999875 2357888878999999
Q ss_pred HHHHHHHHhC
Q 036024 263 EASRRLEALF 272 (272)
Q Consensus 263 ~~l~~l~~~l 272 (272)
+++++|++++
T Consensus 419 ~~l~~l~~~l 428 (434)
T 2epj_A 419 IAVEGLRSSL 428 (434)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 172
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.86 E-value=3.1e-21 Score=165.73 Aligned_cols=217 Identities=12% Similarity=0.085 Sum_probs=148.0
Q ss_pred CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++++++++++++||||.+++.+++++|.++|+++|+++|+|+++. ++.+..+..+. ..+++.|++|.++ .+
T Consensus 134 ~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~----g~~~~~~~~~~----~d~~~~s~~K~l~-~~ 204 (379)
T 3ke3_A 134 DKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS----GCVWLDMKELG----IDVLISAPQKGWS-ST 204 (379)
T ss_dssp HTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC----TTCCCCHHHHT----CSEEEECTTTTTC-SC
T ss_pred cCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc----CCccccccccC----CCEEEecchhhcC-CC
Confidence 478999999999999999999999999999999999999999976 22233333332 1288899999886 33
Q ss_pred cceeEEEecccccccCCc----ch-H--HHHH----hhhh---hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHH
Q 036024 124 VRLGWTVVPEELLFSSGF----PV-I--NDFN----RIIC---TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENT 189 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~----~~-~--~~~~----~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 189 (272)
..+|+++++++....... .. . ..+. .+.. ....+++...+.++.++++......++++++++++++
T Consensus 205 ~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~ 284 (379)
T 3ke3_A 205 PCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELG 284 (379)
T ss_dssp CCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 458999998876321000 00 0 0010 0111 1123567777777767766333334688899999999
Q ss_pred HHHHHHHHhCCCeEecCCC--ce-EEEeecCCCChHHHHHHHHHhcCeEeeCCCCCC---CCCCCeEEEEc--cCCHHHH
Q 036024 190 KILIDTLASLGIKVYGGIN--AP-YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG---PGGEEYIRISG--FGHRESI 261 (272)
Q Consensus 190 ~~l~~~L~~~g~~~~~~~~--~~-~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~~~~R~s~--~~~~~~i 261 (272)
+++++.|+++|+++..+.. +. ...+..++ ..... ...++++||.+.+|..+. +.+.+.+|+++ .++++|+
T Consensus 285 ~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~~-~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di 362 (379)
T 3ke3_A 285 NRVRKVLTDKGIESVAAEGFEAPGVVVSYTER-DDMHK-GSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDI 362 (379)
T ss_dssp HHHHHHHHHTTCCBSBCTTCBCSSEEEEECSC-HHHHS-SHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCH
T ss_pred HHHHHHHHHcCCEecCCccccCceEEEEccCC-cchHH-HHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHH
Confidence 9999999999988876532 22 33334432 11122 344556699999998664 23367899996 3588999
Q ss_pred HHHHHHHHHh
Q 036024 262 LEASRRLEAL 271 (272)
Q Consensus 262 ~~~l~~l~~~ 271 (272)
++++++|+++
T Consensus 363 ~~~~~~l~~~ 372 (379)
T 3ke3_A 363 DGTVERFEKA 372 (379)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998875
No 173
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.86 E-value=2.2e-20 Score=163.13 Aligned_cols=237 Identities=15% Similarity=0.126 Sum_probs=153.7
Q ss_pred cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccC-CCC--CCCc-eEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRT-DIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~-~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+. ... .++..| +++.++.+. ++ +++ .+++ ++|++++|+||||.+.+ +++|+++
T Consensus 154 d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-----~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~l 225 (445)
T 1qgn_A 154 GHIVTTTDCYRKTRIFIETILPKMGITATVIDPAD-----VGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKL 225 (445)
T ss_dssp CEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSC-----HHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHH
T ss_pred CEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCC-----HHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHH
Confidence 55666665444 333 356678 888888751 11 222 1567 99999999999999987 8899999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhh
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
|+++|+++|+|++|...... .+ ..+ +..+++.|+||.+|..| .++||+++++++ ++.+.....
T Consensus 226 a~~~g~~livD~a~~~~~~~---~~-~~~----g~Div~~S~sK~~gg~gd~~~G~l~~~~~l--------~~~l~~~~~ 289 (445)
T 1qgn_A 226 CHEKGALVCIDGTFATPLNQ---KA-LAL----GADLVLHSATKFLGGHNDVLAGCISGPLKL--------VSEIRNLHH 289 (445)
T ss_dssp HHHTTCEEEEECTTTCTTTC---CT-TTT----TCSEEEECTTTTTTCSSSCCCEEEEECHHH--------HHHHHHHHH
T ss_pred HHHcCCEEEEECCCcccccC---Cc-ccc----CCEEEEECCcccccccccceEEEEEECHHH--------HHHHHHHHH
Confidence 99999999999999854321 11 122 22389999999998444 479999998876 455544443
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEecC----------------CCceEEEe
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYGG----------------INAPYVWA 214 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----------------~~~~~~~i 214 (272)
......+.....++.+.++ .+..+.++..++++.+.+.|+++ ++ .+..| ..+.++++
T Consensus 290 ~~g~~~~~~~a~~~~~~l~-----~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf 364 (445)
T 1qgn_A 290 ILGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSF 364 (445)
T ss_dssp HHCCCCCHHHHHHHHHHGG-----GHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEE
T ss_pred HhCCCCCHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEE
Confidence 3333344444343333333 33455667778889999999887 45 44433 14678889
Q ss_pred ecCCC-ChHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024 215 HFPGR-KSWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 215 ~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~~~~~i~~~l~~l~~~ 271 (272)
.+++. ...+.+...++..++.+..|+.+.. ...+.+|+|+. .||++.+++.|+++
T Consensus 365 ~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--~Edid~li~~L~~a 441 (445)
T 1qgn_A 365 EVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--VEDFDDLKADILQA 441 (445)
T ss_dssp EESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--SSCHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec--cCCHHHHHHHHHHH
Confidence 99752 1122222223334788888876531 12479999986 44677777777665
No 174
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.86 E-value=3.5e-21 Score=168.97 Aligned_cols=204 Identities=13% Similarity=0.124 Sum_probs=142.0
Q ss_pred CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++++++++..+||||. ..+++.+++|.++|++||+++|+||+|.++...+...........++ ++ |+||.++ +|
T Consensus 219 ~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d--i~--s~sK~l~-~G 293 (449)
T 3a8u_X 219 NIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPD--LM--CIAKQVT-NG 293 (449)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCS--EE--EECGGGG-TT
T ss_pred CEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCC--EE--EEccccc-CC
Confidence 4555554444678996 56789999999999999999999999986654443222222222223 22 8899998 68
Q ss_pred -cceeEEEecccccccCCcchHHHHHhh---------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024 124 -VRLGWTVVPEELLFSSGFPVINDFNRI---------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI 193 (272)
Q Consensus 124 -~r~G~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 193 (272)
+|+||+++++++ ++.+... ....+.+.+.+++.++.++++.... ++..++++++.++++
T Consensus 294 ~~~~G~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~l~ 362 (449)
T 3a8u_X 294 AIPMGAVIASTEI--------YQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK---ENLVQSVAEVAPHFE 362 (449)
T ss_dssp SSCCEEEEEEHHH--------HHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred CCceEEEEECHHH--------HHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHH
Confidence 999999998876 4555432 1223445788888888877763221 246678888888999
Q ss_pred HHHHhCC-CeEe--cCCCceEEEeecCCCC------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHH
Q 036024 194 DTLASLG-IKVY--GGINAPYVWAHFPGRK------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESIL 262 (272)
Q Consensus 194 ~~L~~~g-~~~~--~~~~~~~~~i~l~~~~------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~ 262 (272)
+.|++++ +... .+..|.++|+.++... ..++...|+++ ||.+.|+ + +++|++ +..++++++
T Consensus 363 ~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~------g-~~iRis~~~~~t~~~i~ 434 (449)
T 3a8u_X 363 KALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKA-GFYVRFG------G-DTLQFGPTFNSKPQDLD 434 (449)
T ss_dssp HHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHH-TEECEEE------T-TEEEECCCTTCCHHHHH
T ss_pred HHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHC-CcEEecC------C-CEEEEECCCcCCHHHHH
Confidence 9888752 2211 1235788999997421 12567777765 9999986 1 689999 567999999
Q ss_pred HHHHHHHHhC
Q 036024 263 EASRRLEALF 272 (272)
Q Consensus 263 ~~l~~l~~~l 272 (272)
+++++|++++
T Consensus 435 ~~l~~l~~~l 444 (449)
T 3a8u_X 435 RLFDAVGEVL 444 (449)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 175
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.86 E-value=5.6e-21 Score=168.16 Aligned_cols=203 Identities=8% Similarity=-0.033 Sum_probs=136.0
Q ss_pred ceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024 46 TDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV 124 (272)
Q Consensus 46 ~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 124 (272)
++++++..++|++|. .++++.+++|.++|++||+++|+||+|.++...+...........++ +.++||.++.+|+
T Consensus 220 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pd----i~t~sK~l~gg~~ 295 (459)
T 4a6r_A 220 VAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPD----LFTAAKGLSSGYL 295 (459)
T ss_dssp EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCS----EEEECGGGGTTSS
T ss_pred EEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCC----eeehhhhhcCCCC
Confidence 344444444555565 45889999999999999999999999998765553332333332333 2368999984449
Q ss_pred ceeEEEecccccccCCcchHHHHH---hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHH-HHHHHHHHHH----
Q 036024 125 RLGWTVVPEELLFSSGFPVINDFN---RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK-ENTKILIDTL---- 196 (272)
Q Consensus 125 r~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~L---- 196 (272)
|+||++++++. ++.+. ......+++.+++++.|+.++++.... +...++++ ++.+++++.|
T Consensus 296 ~lg~v~~~~~i--------~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~~l~~~l 364 (459)
T 4a6r_A 296 PIGAVFVGKRV--------AEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRD---EGIVQRVKDDIGPYMQKRWRETF 364 (459)
T ss_dssp CCEEEEECHHH--------HHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHH---TCHHHHHHHTHHHHHHHHHHHHH
T ss_pred CccceeeCHHH--------HHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999887 55555 334444556888999999888873222 22334444 4444444444
Q ss_pred HhC-CCeEecCCCceEEEeecCCC-C-----------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHH
Q 036024 197 ASL-GIKVYGGINAPYVWAHFPGR-K-----------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESI 261 (272)
Q Consensus 197 ~~~-g~~~~~~~~~~~~~i~l~~~-~-----------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i 261 (272)
.+. .+....+ .|.++++.+... . ..++...++++ ||.+.|+. +++|++ +..+++++
T Consensus 365 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g-------~~iRi~~~~~~t~e~i 435 (459)
T 4a6r_A 365 SRFEHVDDVRG-VGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRN-NLIMRACG-------DHIVSAPPLVMTRAEV 435 (459)
T ss_dssp TTCTTEEEEEE-ETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHT-TEECEEET-------TEEEECCCTTCCHHHH
T ss_pred hcCCCeEEEEE-EEEEEEEEEecCccccccccchHHHHHHHHHHHHHC-CeEEecCC-------CEEEEECCCCCCHHHH
Confidence 444 3444444 466777777521 1 34566666666 99999862 689999 56799999
Q ss_pred HHHHHHHHHhC
Q 036024 262 LEASRRLEALF 272 (272)
Q Consensus 262 ~~~l~~l~~~l 272 (272)
++++++|++++
T Consensus 436 ~~~l~~l~~~l 446 (459)
T 4a6r_A 436 DEMLAVAERCL 446 (459)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998763
No 176
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.86 E-value=1.2e-20 Score=163.09 Aligned_cols=239 Identities=19% Similarity=0.102 Sum_probs=158.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...++..| +++.++++++ ++.+|++. .+++++++ |+||||.+.+ +++|.++|++
T Consensus 104 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~l~~~ 176 (399)
T 2oga_A 104 DEVIVPSHTYIASWLAVSATGATPVPVEPHED-HPTLDPLLVEKAITPRTRALL---PVHLYGHPAD---MDALRELADR 176 (399)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECBCSS-SSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHCCCEEEEEecCCC-CCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC---HHHHHHHHHH
Confidence 56677666555 777788888 9999999764 45556433 24677766 5789999977 8999999999
Q ss_pred cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEec-ccccccCCcchHHHHHhhhh
Q 036024 77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~ 152 (272)
+|+++|+|++|..+. +++ ..+..+ . .+++.|+ ||.+|.+| |.||++.+ +++ .+.+.....
T Consensus 177 ~~~~li~Dea~~~g~~~~~--~~~~~~---~--di~~~S~~~sK~~~~~G-~~g~~~~~~~~~--------~~~l~~~~~ 240 (399)
T 2oga_A 177 HGLHIVEDAAQAHGARYRG--RRIGAG---S--SVAAFSFYPGKNLGCFG-DGGAVVTGDPEL--------AERLRMLRN 240 (399)
T ss_dssp HTCEECEECTTCTTCEETT--EETTCT---T--CEEEEECCTTSSSCCSS-CCEEEEESCHHH--------HHHHHHHHB
T ss_pred cCCEEEEECcccccCccCC--eecccc---c--CEEEEeCCCCccCCcCC-ceEEEEeCCHHH--------HHHHHHHHh
Confidence 999999999998653 222 111111 1 2888888 79999668 99999987 454 444443332
Q ss_pred hc------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-CCCceEEEe--ec
Q 036024 153 TC------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG-GINAPYVWA--HF 216 (272)
Q Consensus 153 ~~------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~i--~l 216 (272)
.. ....+.+...++.+.++ ++++..++.+++.+++.+.|+++ |+++.. +..+.++|+ .+
T Consensus 241 ~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~ 315 (399)
T 2oga_A 241 YGSRQKYSHETKGTNSRLDEMQAAVLRIRLA-----HLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTV 315 (399)
T ss_dssp TTCSSTTCCCSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEE
T ss_pred cCccccccccccccCCCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEE
Confidence 11 12345555555544443 23445667777888999999887 777653 344555553 33
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCCCC--------C-------------CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 217 PGRKSWDVFAEILEKTHITTVPGSGFGPG--------G-------------EEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--------~-------------~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
...+..++...|.+ +||.+.++...... + .+.+|+++ ..+++|+++++++|+++
T Consensus 316 ~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~ 392 (399)
T 2oga_A 316 RTERRDELRSHLDA-RGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREW 392 (399)
T ss_dssp ECSSHHHHHHHHHH-TTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHH-CCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 33355566666655 59999875311000 0 25799996 35899999999999875
No 177
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.86 E-value=3.9e-21 Score=167.71 Aligned_cols=202 Identities=17% Similarity=0.152 Sum_probs=134.6
Q ss_pred eEEEEecCCCccccCCC--HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024 47 DIIFFCSPNNPTGHAAT--QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV 124 (272)
Q Consensus 47 ~~i~~~~p~nptG~~~~--~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 124 (272)
..+++++|+||+|..++ ++.+++|.++|++||+++|+||+|.++ ..+...........++ +.|+||.+| +|+
T Consensus 201 ~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pd----i~t~sK~~~-~G~ 274 (429)
T 4e77_A 201 VACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPD----LTCLGKIIG-GGM 274 (429)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCS----EEEEEGGGG-TTS
T ss_pred EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCC----eeeeccccc-CCC
Confidence 44555667656554433 455999999999999999999999987 4443222222322223 248999999 899
Q ss_pred ceeEEEecccccccCCcchHHHHHhh---hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh---
Q 036024 125 RLGWTVVPEELLFSSGFPVINDFNRI---ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--- 198 (272)
Q Consensus 125 r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--- 198 (272)
|+||++++++.+ +.+... ....+++.+++++.++.+.++.... ++..++++++.+++++.|.+
T Consensus 275 ~~G~~~~~~~~~--------~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 343 (429)
T 4e77_A 275 PVGAFGGRREVM--------NALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAK 343 (429)
T ss_dssp CCEEEEECHHHH--------TTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECHHHH--------HHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988773 333321 2334445888888888888863221 23444555555555555544
Q ss_pred -CCCeEecCCCceEEEeecCCCCh---------------HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHH
Q 036024 199 -LGIKVYGGINAPYVWAHFPGRKS---------------WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL 262 (272)
Q Consensus 199 -~g~~~~~~~~~~~~~i~l~~~~~---------------~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~ 262 (272)
.++....+..|.++++.++.... .++...++++ ||.+.|+. ...+|+++..++++++
T Consensus 344 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~------~~~~~~~~~~t~e~i~ 416 (429)
T 4e77_A 344 EENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE-GVYLAPSA------FEAGFMSLAHSNEDIQ 416 (429)
T ss_dssp HTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT-TEECCSST------TSCEECCTTCCHHHHH
T ss_pred hCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHC-CeEEeecC------CCCEEEeccCCHHHHH
Confidence 45443333467889999875321 5667777766 99998875 3467888778999999
Q ss_pred HHHHHHHHhC
Q 036024 263 EASRRLEALF 272 (272)
Q Consensus 263 ~~l~~l~~~l 272 (272)
+++++|++++
T Consensus 417 ~~l~~l~~~l 426 (429)
T 4e77_A 417 KTVNAARRCF 426 (429)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 178
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.86 E-value=1.8e-21 Score=171.10 Aligned_cols=246 Identities=14% Similarity=0.123 Sum_probs=161.0
Q ss_pred cccccCc-ccchHHhcccc-eeEEeecCC-CCCcccCCCC----C------CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024 6 SVIVGQA-GDLEDEVGKYC-NIEYLECGP-GNNFFPDLKG----T------SRTDIIFFCSPNNPTGHAATQNQLEQLVE 72 (272)
Q Consensus 6 ~~~~~~~-~~~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~----~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~ 72 (272)
|++..+. +.+...++..| +++.++..+ +.++.+|++. . +++.++++++||||||.+.+ +++|.+
T Consensus 179 vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~ 255 (456)
T 2z67_A 179 VIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAK 255 (456)
T ss_dssp EEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHH
T ss_pred EEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHH
Confidence 4444443 33667777788 888888742 2345666333 1 35667778899999999976 899999
Q ss_pred HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhh
Q 036024 73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRII 151 (272)
Q Consensus 73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (272)
+|+++|+++++|++|..+..+..+.....+.+..| +++.|++|.++ .+.++||++++ ++. +..+....
T Consensus 256 la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D--~~~~s~hK~~~-~p~g~G~l~~~~~~~--------~~~l~~~~ 324 (456)
T 2z67_A 256 ICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVD--AVVSSSDKNLL-TPIGGGLVYSTDAEF--------IKEISLSY 324 (456)
T ss_dssp HHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCS--EEEEEHHHHHC-CCSSCEEEEESCHHH--------HHHHHTTS
T ss_pred HHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCC--EEEEcCCCCcC-CCCCeEEEEEcCHHH--------HhhcCcCC
Confidence 99999999999999986543211111111211122 67889999765 55889999995 444 33442222
Q ss_pred hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeec--CCCChHHHH
Q 036024 152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHF--PGRKSWDVF 225 (272)
Q Consensus 152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l--~~~~~~~~~ 225 (272)
.......+.+.+.++...+ +..++++..++.+++++++.+.|+++ |+.+.+++ +++++.+ ++. ..++.
T Consensus 325 ~g~~~~~~~~~~~aal~~l---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~--~~v~~~~~~~~~-~~~l~ 398 (456)
T 2z67_A 325 PGRASATPVVNTLVSLLSM---GSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE--SPIASCISVNSD-PVEIA 398 (456)
T ss_dssp CSCBCSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC--CSSEEEEECSSC-HHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC--CeEEEEEecccH-HHHHH
Confidence 1111112233333333333 34566888999999999999999987 88777765 5666676 432 35676
Q ss_pred HHHHHhcCe---Eee------CCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 226 AEILEKTHI---TTV------PGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 226 ~~ll~~~gi---~v~------~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
..|.++ || .+. +|..|.....+++|++++ ++++++++++++|++++
T Consensus 399 ~~L~~~-gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 399 AKLYNL-RVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp HHHHHT-TEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred HHHHHc-CCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 777665 65 443 244554434579999964 69999999999998764
No 179
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.86 E-value=1.2e-20 Score=165.30 Aligned_cols=237 Identities=11% Similarity=0.078 Sum_probs=150.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeec--CCCCC--cccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLEC--GPGNN--FFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~--~~~~~--~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...+...| ++++++. +++.+ +.+|++. .++++++++++ .|+||.+.+ +++|+++|+
T Consensus 97 d~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~ 172 (446)
T 2x3l_A 97 GDILMARNVHKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRLNNDGHKLVVLTY-PNYYGETFN---VEEVIKSLH 172 (446)
T ss_dssp SCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSSEEEEEC-------CCEEEEES-SCTTSCCCC---HHHHHHHHH
T ss_pred CEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCcCCCCCHHHHcCCCceEEEEEC-CCCCeEecC---HHHHHHHHH
Confidence 55666665444 666667778 8999988 43311 3344333 36789999999 456999988 889999999
Q ss_pred HcCCEEEEcccCCc-cccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh-h
Q 036024 76 NNGSIIIFDSAYAA-YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC-T 153 (272)
Q Consensus 76 ~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~ 153 (272)
++|+++++||+|+. +.+.+.+.+..... .+ +++.|+||.++ ++.++||++++++.+. ...+..... .
T Consensus 173 ~~~~~livDea~~~~~~f~~~~~~~~~~g--~D--i~~~S~~K~l~-~~~g~g~l~~~~~~i~------~~~~~~~~~~~ 241 (446)
T 2x3l_A 173 QLNIPVLIDEAHGAHFGLQGFPDSTLNYQ--AD--YVVQSFHKTLP-ALTMGSVLYIHKNAPY------RENIIEYLSYF 241 (446)
T ss_dssp HTTCCEEEECTTCTTTTSTTSCCCGGGGT--CS--EEEECHHHHSS-SCTTCEEEEEETTCTT------HHHHHHHHHHH
T ss_pred hcCCeEEEcchhhhhhccCCCCCChHHcC--CC--EEEECCccccc-cccccEEEEEcCCcCC------HHHHHHHHHHH
Confidence 99999999999986 32333222333332 22 89999999664 4445899999887632 112222111 1
Q ss_pred ccCCcchHHHHHHHHh---cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHH
Q 036024 154 CFNGASNIAQAGGLAC---LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILE 230 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~---l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~ 230 (272)
...+++.....++..+ +...+ .++..++.+++.+++++. |+++.++.++.++|+.+++.+..++...|.+
T Consensus 242 ~~~s~~~~~~aal~~a~~~l~~~g---~~~~~~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~~~~~~~l~~~L~~ 314 (446)
T 2x3l_A 242 QTSSPSYLIMASLESAAQFYKTYD---STLFFAKRAQLIECLENK----GFEMLQVDDPLKLLIKYEGFTGHDIQNWFMN 314 (446)
T ss_dssp SCSSCCHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHH----TCEEEECSSTTEEEEECTTSCHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHc----CCEECcCCCCeEEEEEeCCcCHHHHHHHHHH
Confidence 2222333333222222 22111 122555566666666665 8888776556689999886666777777766
Q ss_pred hcCeEee-CCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 231 KTHITTV-PGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 231 ~~gi~v~-~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
+ ||.+. +| .+++|+++. .+++++ +++++|+++
T Consensus 315 ~-GI~v~~~g-------~~~iRi~~~~~~t~e~i-~l~~aL~~~ 349 (446)
T 2x3l_A 315 A-HIYLELAD-------DYQALAILPLWHHDDTY-LFDSLLRKI 349 (446)
T ss_dssp T-TEEESEEC-------SSCEEEECCCCCTTCCC-CHHHHHHHH
T ss_pred C-CCEEEecC-------CCEEEEEeecCCCHHHH-HHHHHHHHH
Confidence 6 99996 43 368999975 488889 988888765
No 180
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.86 E-value=4.3e-20 Score=159.28 Aligned_cols=238 Identities=14% Similarity=0.105 Sum_probs=155.8
Q ss_pred cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. ....+ ...| ++++++.+.-..+.-.+ .+++++|++.+|+||||.+.+ +++|+++|+++
T Consensus 106 d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~ 180 (392)
T 3qhx_A 106 DHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAI--RPTTRLIWVETPTNPLLSIAD---IAGIAQLGADS 180 (392)
T ss_dssp CEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH
T ss_pred CEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhh--CCCCeEEEEECCCCCCcEEec---HHHHHHHHHHc
Confidence 55666665544 33333 6678 88888875111111112 268999999999999999987 99999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecc-cccccCCcchHHHHHhhhhhcc
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPE-ELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
|+++|+|++|...... .+ ..+ +..+++.|+||.+|.+| .|+||++.++ ++ .+.+........
T Consensus 181 g~~li~D~~~~~~~~~---~~-~~~----~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~--------~~~l~~~~~~~g 244 (392)
T 3qhx_A 181 SAKVLVDNTFASPALQ---QP-LSL----GADVVLHSTTKYIGGHSDVVGGALVTNDEEL--------DQSFAFLQNGAG 244 (392)
T ss_dssp TCEEEEECTTTCTTTC---CG-GGG----TCSEEEEETTTTTTCSSCCCCEEEEESCHHH--------HHHHHHHHHHHC
T ss_pred CCEEEEECCCcccccC---Ch-HHh----CCcEEEEcCccccCCCCCceEEEEEECcHHH--------HHHHHHHHHhcC
Confidence 9999999999853211 11 122 22389999999999666 7899999985 44 555655555455
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC----------------CCceEEEeecC
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG----------------INAPYVWAHFP 217 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~i~l~ 217 (272)
...++..+.++.+.++. +..+.++..++.+.+.+.|.+. .+. +..| ..|.++++.++
T Consensus 245 ~~~~~~~~~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~ 319 (392)
T 3qhx_A 245 AVPGPFDAYLTMRGLKT-----LVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMR 319 (392)
T ss_dssp CCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET
T ss_pred CCCCHHHHHHHHhhhhH-----HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeC
Confidence 55777777666666553 3455677788888899999876 332 2221 12668889997
Q ss_pred CC-ChHHHHHHHHHhcCeEeeCCCCCC----C--------------CCCCeEEEEccC--CHHHHHHHHHH
Q 036024 218 GR-KSWDVFAEILEKTHITTVPGSGFG----P--------------GGEEYIRISGFG--HRESILEASRR 267 (272)
Q Consensus 218 ~~-~~~~~~~~ll~~~gi~v~~g~~~~----~--------------~~~~~~R~s~~~--~~~~i~~~l~~ 267 (272)
+. ...+.+...++..++.+..|+.++ + ..++.+|+|+.. +++.++.+.++
T Consensus 320 ~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~a 390 (392)
T 3qhx_A 320 AGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQA 390 (392)
T ss_dssp TCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 52 223333344555688888887653 1 135789999854 23334444433
No 181
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.86 E-value=7e-21 Score=168.20 Aligned_cols=204 Identities=15% Similarity=0.075 Sum_probs=147.0
Q ss_pred CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCcc-ccCCCCCceEEEecCccccCC
Q 036024 44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIY-EIPGAREVAIEISSFSKFSGF 121 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~ 121 (272)
+++++|++..++|++|. +++++.+++|.++|++||+++|+||+|.++...+...... .....++ + .++||.+|
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pd--i--~t~sK~l~- 294 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPD--I--ITFAKGVT- 294 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCS--E--EEECGGGG-
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcc--h--hhhhhhhc-
Confidence 35567777777888885 8888999999999999999999999999876555433333 2322333 2 26899998
Q ss_pred Cc-cceeEEEecccccccCCcchHHHHHhh-------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024 122 TG-VRLGWTVVPEELLFSSGFPVINDFNRI-------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI 193 (272)
Q Consensus 122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 193 (272)
.| +|+|++++++++ ++.+... ....+++.+++++.|+.++++.... ++..++++++.++++
T Consensus 295 ~G~~plg~v~~~~~i--------~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~ 363 (476)
T 3i5t_A 295 SGYVPLGGLAISEAV--------LARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---EGIVDQAREMADYFA 363 (476)
T ss_dssp TTSSCCEEEEECHHH--------HHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred CCCcCeEEEEECHHH--------HHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHH
Confidence 79 999999998887 4444332 3335556888999999888873222 456777888888888
Q ss_pred HHHHhCC----CeEecCCCceEEEeecCCCC------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--cc
Q 036024 194 DTLASLG----IKVYGGINAPYVWAHFPGRK------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GF 255 (272)
Q Consensus 194 ~~L~~~g----~~~~~~~~~~~~~i~l~~~~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~ 255 (272)
+.|+.++ +....+ .|.++++.+.... ..++...++++ ||.+.|. + +++|++ +.
T Consensus 364 ~~L~~l~~~~~v~~v~~-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~------g-~~iRi~p~l~ 434 (476)
T 3i5t_A 364 AALASLRDLPGVAETRS-VGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFEL-GLIVRPL------G-DLCVISPPLI 434 (476)
T ss_dssp HHHHTTTTSTTEEEEEE-ETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHT-TEECEEE------T-TEEEECCCTT
T ss_pred HHHHHHhcCCCeEEEEe-cCceeEEEEecCccccccccchhHHHHHHHHHHHHC-CCEEEec------C-CEEEEECCCC
Confidence 8887652 333443 4667778776321 34556666665 9999873 1 689999 67
Q ss_pred CCHHHHHHHHHHHHHhC
Q 036024 256 GHRESILEASRRLEALF 272 (272)
Q Consensus 256 ~~~~~i~~~l~~l~~~l 272 (272)
.+++++++++++|++++
T Consensus 435 ~t~e~i~~~l~~l~~~l 451 (476)
T 3i5t_A 435 ISRAQIDEMVAIMRQAI 451 (476)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 79999999999998763
No 182
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.86 E-value=4.1e-20 Score=159.95 Aligned_cols=240 Identities=16% Similarity=0.169 Sum_probs=152.8
Q ss_pred cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. ... .++..| +++.++.+....+.-.+ .+++++|++++|+||||.+++ +++|+++|+++
T Consensus 106 d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i--~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~ 180 (403)
T 3cog_A 106 DQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAI--TPETKLVWIETPTNPTQKVID---IEGCAHIVHKH 180 (403)
T ss_dssp CEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSS
T ss_pred CEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHc
Confidence 55666666554 222 346678 99999876111111112 268899999999999999997 89999999999
Q ss_pred C-CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecc-cccccCCcchHHHHHhhhhhc
Q 036024 78 G-SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPE-ELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 78 ~-~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 154 (272)
| +++|+|++|..+.+. .++. + +..+++.|+||.+|.+| .|+||+++++ ++ .+.+.......
T Consensus 181 g~~~livD~~~~~~~~~---~~~~-~----~~div~~S~sK~~~g~~~~~~G~v~~~~~~l--------~~~l~~~~~~~ 244 (403)
T 3cog_A 181 GDIILVVDNTFMSPYFQ---RPLA-L----GADISMYSATKYMNGHSDVVMGLVSVNCESL--------HNRLRFLQNSL 244 (403)
T ss_dssp SCCEEEEECTTTCTTTC---CTTT-T----TCSEEEEETTTTTTCSSCCCCEEEEECCHHH--------HHHHHHHHHHH
T ss_pred CCCEEEEECCCcccccC---Cccc-c----CCeEEEEcChhhccCCCCCeEEEEEECcHHH--------HHHHHHHHHhc
Confidence 9 999999999875532 1221 2 34599999999998665 5799999864 44 55565555444
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCeEecCC---CceEEEeec
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---------------GIKVYGGI---NAPYVWAHF 216 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------------g~~~~~~~---~~~~~~i~l 216 (272)
....+.+.+.++.+.++. +..+.++..++...+.+.|++. ++.+..++ .+.++.+.+
T Consensus 245 g~~~~~~~~~~~~~~l~~-----l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l 319 (403)
T 3cog_A 245 GAVPSPIDCYLCNRGLKT-----LHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYI 319 (403)
T ss_dssp CCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEE
T ss_pred CCCCCHHHHHHHHhhhhH-----HHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEe
Confidence 445677777766666652 2334555566666666666553 23332221 244555577
Q ss_pred CCCChHHHHHHHHHhcCeEeeC---CC----------CC--C---------CCCCCeEEEEccC--CHHHHHHHHHHHHH
Q 036024 217 PGRKSWDVFAEILEKTHITTVP---GS----------GF--G---------PGGEEYIRISGFG--HRESILEASRRLEA 270 (272)
Q Consensus 217 ~~~~~~~~~~~ll~~~gi~v~~---g~----------~~--~---------~~~~~~~R~s~~~--~~~~i~~~l~~l~~ 270 (272)
++. .+...+++++.||.+.. |. .+ . ...++.+|+|+.. ++++++.+.+.|++
T Consensus 320 ~~~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 320 KGT--LQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp SSC--HHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred cCC--HHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 642 24455666777885432 21 11 1 0126799999754 46667777777766
Q ss_pred h
Q 036024 271 L 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 398 ~ 398 (403)
T 3cog_A 398 A 398 (403)
T ss_dssp H
T ss_pred h
Confidence 4
No 183
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.86 E-value=1.1e-20 Score=165.99 Aligned_cols=255 Identities=15% Similarity=0.022 Sum_probs=163.6
Q ss_pred ccccccCcccchHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-
Q 036024 5 SSVIVGQAGDLEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN- 77 (272)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~- 77 (272)
.|++...++.|...++..| +++.+|++++ ++.+|++. .+++++|++++|+||||.+.+ +++|.++|+++
T Consensus 142 ~vi~~~~h~~~~~~~~~~G~~v~~v~~~~~-~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~ 217 (452)
T 2dgk_A 142 NLVCGPVQICWHKFARYWDVELREIPMRPG-QLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQ 217 (452)
T ss_dssp EEEESSCCHHHHHHHHHTTCEEEECCCBTT-BCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHcCceEEEEecCCC-CCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHh
Confidence 5666552222777778889 9999999762 56666443 257889999999999999976 88899999985
Q ss_pred -----CCEEEEcccCCcccc---CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHH
Q 036024 78 -----GSIIIFDSAYAAYVT---DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFN 148 (272)
Q Consensus 78 -----~~~vi~D~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~ 148 (272)
++++++|++|..+.. .+... . .+ ...+-.++..|++| ++..|.++||++++++ .+.+.+......+.
T Consensus 218 ~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~-~~-~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 293 (452)
T 2dgk_A 218 ADTGIDIDMHIDAASGGFLAPFVAPDIV-W-DF-RLPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQELVFNVDYLG 293 (452)
T ss_dssp HHHCCCCCEEEECTTGGGTHHHHCTTCC-C-ST-TSTTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCGGGCEEECCTT
T ss_pred hccCCCCcEEEEcccHHHHHHhhCccch-h-hc-CCCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHHHhccCccccC
Confidence 999999999997643 22111 1 11 12223367778899 5458889999999764 32111100000000
Q ss_pred hhh-----hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCC
Q 036024 149 RII-----CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPG 218 (272)
Q Consensus 149 ~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~ 218 (272)
... ..+........+.++...+ +.+.++++.+++.++++++.+.|+++ ++++..+ ....++.+.+++
T Consensus 294 ~~~~~~~~~~~r~~~~~~~~~aal~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~ 370 (452)
T 2dgk_A 294 GQIGTFAINFSRPAGQVIAQYYEFLRL---GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKD 370 (452)
T ss_dssp CCEEECCSCCSCBCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECT
T ss_pred CCCCCcccCCCChhHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecC
Confidence 000 0011111334444444443 33556888999999999999999998 5888754 345677777764
Q ss_pred C-----ChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 219 R-----KSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 219 ~-----~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
. +..++...|.++ ||.+....... ..+.+++|+++. .|+++++++++.|+++
T Consensus 371 ~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~ 430 (452)
T 2dgk_A 371 GEDPGYTLYDLSERLRLR-GWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKAS 430 (452)
T ss_dssp TCCCSCCHHHHHHHHHHT-TCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHhc-CCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 2 236777777655 99764322111 123568999974 3789999999998765
No 184
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.86 E-value=7.8e-20 Score=157.54 Aligned_cols=206 Identities=12% Similarity=0.146 Sum_probs=137.6
Q ss_pred cccccccCccc-chHH----hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDE----VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +... ++..| +++.++...-..+.-.+ .++++++++++|+||||.+++ +++|.++|+++
T Consensus 99 d~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~ 173 (389)
T 3acz_A 99 DHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAW--KPNTKMVYLESPANPTCKVSD---IKGIAVVCHER 173 (389)
T ss_dssp CEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc
Confidence 55666666554 3333 46678 88888874211111112 257899999999999999997 89999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecc-cccccCCcchHHHHHhhhhhcc
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPE-ELLFSSGFPVINDFNRIICTCF 155 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
|+++|+|++|..+... .++ .+ +..+++.|+||.+|.+|.|+ ||+++++ ++ ++.+........
T Consensus 174 ~~~livD~~~~~~~~~---~~~-~~----~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~--------~~~l~~~~~~~g 237 (389)
T 3acz_A 174 GARLVVDATFTSPCFL---KPL-EL----GADIALHSVSKYINGHGDVIGGVSSAKTAED--------IATIKFYRKDAG 237 (389)
T ss_dssp TCEEEEECTTTCTTTC---CGG-GT----TCSEEEEETTTTTTCSSCCCCEEEEESSHHH--------HHHHHHHHHHHC
T ss_pred CCEEEEECCCcccccc---Ccc-cc----CCeEEEECChhhccCCCCceeEEEEECcHHH--------HHHHHHHHHhcC
Confidence 9999999999865432 122 12 23499999999999899998 9999988 66 555555443333
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------eEec---CCCceEEEeecC
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-I--------------KVYG---GINAPYVWAHFP 217 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~~---~~~~~~~~i~l~ 217 (272)
...+...+.++.+.++. +..+.++..++.+.+.+.|++++ + .+.. ...+.++.+.++
T Consensus 238 ~~~~~~~~~~~~~~l~~-----l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~ 312 (389)
T 3acz_A 238 SLMAPMDAFLCARGMKT-----LPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK 312 (389)
T ss_dssp CCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES
T ss_pred CCCCHHHHHHHHcCccH-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC
Confidence 44555666655555542 24445666677788888887652 1 1111 113567778886
Q ss_pred CCChHHHHHHHHHhcCeEeeC
Q 036024 218 GRKSWDVFAEILEKTHITTVP 238 (272)
Q Consensus 218 ~~~~~~~~~~ll~~~gi~v~~ 238 (272)
+ .+...+++++.||.+.+
T Consensus 313 ~---~~~~~~~l~~~~i~~~~ 330 (389)
T 3acz_A 313 S---FEAAKKLMEHLKVCTLA 330 (389)
T ss_dssp S---HHHHHHHHTTCSSSEEB
T ss_pred C---HHHHHHHHHhCCCcEEC
Confidence 4 34466677777988876
No 185
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.85 E-value=6.6e-20 Score=158.46 Aligned_cols=241 Identities=16% Similarity=0.158 Sum_probs=159.4
Q ss_pred cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +...+ ...| +++.++.+.-..+.-.+ .++++++++++|+||||.+++ +++|+++|+++
T Consensus 105 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 179 (398)
T 1gc0_A 105 DEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAM--TPATRVIYFESPANPNMHMAD---IAGVAKIARKH 179 (398)
T ss_dssp CEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGG
T ss_pred CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCccccc---HHHHHHHHHHc
Confidence 55666666554 44433 6677 88888764111111112 257899999999999999987 89999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhh-cc
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICT-CF 155 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 155 (272)
|+++|+|++|..+.... ++ .. +..+++.|+||.+|.+|.|+ ||++++++.+ ...+...... ..
T Consensus 180 ~~~li~D~~~~~~~~~~---~~-~~----~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~-------~~~~~~~~~~~~~ 244 (398)
T 1gc0_A 180 GATVVVDNTYCTPYLQR---PL-EL----GADLVVHSATKYLSGHGDITAGIVVGSQALV-------DRIRLQGLKDMTG 244 (398)
T ss_dssp TCEEEEECTTTHHHHCC---GG-GG----TCSEEEEETTTTTTCSSSCCCEEEEECHHHH-------HHHHHTHHHHHTC
T ss_pred CCEEEEECCCcccccCC---ch-hh----CceEEEECCccccCCCCCCeEEEEEEChHHH-------HHHHHHHhhccCC
Confidence 99999999998755432 22 22 23489999999999899998 9999887762 2234433333 33
Q ss_pred CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------eEecC---CCceEEEeecC
Q 036024 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-I--------------KVYGG---INAPYVWAHFP 217 (272)
Q Consensus 156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~~~---~~~~~~~i~l~ 217 (272)
.+.+...+.++.+.++ .+..+.++..++.+.+.+.|.+++ + .+..+ ..+.++.+.++
T Consensus 245 ~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (398)
T 1gc0_A 245 AVLSPHDAALLMRGIK-----TLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELK 319 (398)
T ss_dssp CCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEET
T ss_pred CCCCHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEEC
Confidence 4466777666666554 235566777888888888887752 2 12221 24667777886
Q ss_pred CCChHHHHHHHHHhcCeEeeC---CCCC------------C-C--------CCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024 218 GRKSWDVFAEILEKTHITTVP---GSGF------------G-P--------GGEEYIRISGFG--HRESILEASRRLEAL 271 (272)
Q Consensus 218 ~~~~~~~~~~ll~~~gi~v~~---g~~~------------~-~--------~~~~~~R~s~~~--~~~~i~~~l~~l~~~ 271 (272)
+ ..+....++++.|+.+.. |+.. . + ...+.+|+|+.. ++++++.+.+.|+++
T Consensus 320 ~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 320 G--GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp T--HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 4 234566677777887765 3221 0 0 114899999743 678899999988875
No 186
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.85 E-value=7.7e-21 Score=165.88 Aligned_cols=202 Identities=16% Similarity=0.165 Sum_probs=139.6
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
+++++++..++|++|.+. +++.+++|.++|++||+++|+||+|.++ ..+...........++ +.|+||.+| +|
T Consensus 200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d----i~t~sK~~~-~G 273 (429)
T 3k28_A 200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPD----LTCLGKVIG-GG 273 (429)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCS----EEEECGGGG-TT
T ss_pred CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCc----eehhhhhhc-CC
Confidence 445555555566666555 5778999999999999999999999987 4442222222222222 347899998 69
Q ss_pred cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 199 (272)
+|+||++++++++ +.+.. .....+++.+++++.++.++++... ++..++++++.+++++.|+++
T Consensus 274 ~~iG~~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~ 341 (429)
T 3k28_A 274 LPVGAYGGKAEIM--------RQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAA 341 (429)
T ss_dssp SCCEEEEECHHHH--------TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcHHHH--------hhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988873 33322 1233445688899999998887443 567778888888888887764
Q ss_pred ---CC-eEecCCCceEEEeecCCCC--------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHH
Q 036024 200 ---GI-KVYGGINAPYVWAHFPGRK--------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESI 261 (272)
Q Consensus 200 ---g~-~~~~~~~~~~~~i~l~~~~--------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i 261 (272)
+. .... ..|.++++.+.... ..++...++++ ||.+.|+. .+.+|+++..+++++
T Consensus 342 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------~~~~r~~~~~t~e~i 413 (429)
T 3k28_A 342 EKHGIPHHIN-RAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQ-GVFLPPSQ------FEGLFLSTVHSDADI 413 (429)
T ss_dssp HHTTCCCEEE-EETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST------TSCBCCCTTCCHHHH
T ss_pred hhCCCCEEEE-eeccEEEEEEecCCcccccccccccHHHHHHHHHHHHHC-CeEEecCC------CCCEEEECCCCHHHH
Confidence 32 2233 34667777764211 24566666655 99998864 457899988899999
Q ss_pred HHHHHHHHHhC
Q 036024 262 LEASRRLEALF 272 (272)
Q Consensus 262 ~~~l~~l~~~l 272 (272)
++++++|++++
T Consensus 414 ~~~l~~l~~~l 424 (429)
T 3k28_A 414 EATIAAAEIAM 424 (429)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998763
No 187
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.85 E-value=9.6e-21 Score=166.21 Aligned_cols=206 Identities=11% Similarity=0.061 Sum_probs=143.5
Q ss_pred CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++|+++.++|||| ..++++.+++|.++|++||+++|+||+|.++...+...........++ +.|+||.+
T Consensus 230 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l--- 302 (449)
T 2cjg_A 230 HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPD----IVAFGKKT--- 302 (449)
T ss_dssp TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCS----EEEECGGG---
T ss_pred CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCce----EEEecCcc---
Confidence 4667766665589999 599999999999999999999999999998765554323222222222 23789988
Q ss_pred ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
|+||+++++++....... .+.......+.+.+++++.|+.++++.... ++..++++++.+++++.|+++
T Consensus 303 --~iG~~~~~~~~~~~l~~~---~~~~~~~~~t~~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~ 374 (449)
T 2cjg_A 303 --QVCGVMAGRRVDEVADNV---FAVPSRLNSTWGGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAAD 374 (449)
T ss_dssp --SSEEEEECGGGGGSTTCT---TTSTTSSCCSSSSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cEEEEEECHHHhhhhhhc---ccCCcccccCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 689999988773210000 011122334455788999988888863222 346678888888888888764
Q ss_pred -C--CeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 200 -G--IKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 200 -g--~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
. +....+ .|.++++.++.. ...++...|+++ ||.+.|+. .+++|++ +..+++++++++++|++++
T Consensus 375 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g------~~~iRi~~~~~~t~e~i~~~l~~l~~~l 445 (449)
T 2cjg_A 375 FPAVVLDPRG-RGLMCAFSLPTTADRDELIRQLWQR-AVIVLPAG------ADTVRFRPPLTVSTAEIDAAIAAVRSAL 445 (449)
T ss_dssp STTTSEEEEE-ETTEEEEECSSHHHHHHHHHHHHHT-TEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCceeeEee-ccEEEEEEECChHHHHHHHHHHHHC-CeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 2 444444 466777888742 345677777764 99999863 5799996 4679999999999998763
No 188
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.85 E-value=3.5e-21 Score=167.79 Aligned_cols=201 Identities=16% Similarity=0.132 Sum_probs=137.8
Q ss_pred EEEEecCCCc-cccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc
Q 036024 48 IIFFCSPNNP-TGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR 125 (272)
Q Consensus 48 ~i~~~~p~np-tG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r 125 (272)
.+++++|+|+ ||.++ +++.+++|.++ ++||+++|+||+|.++ ..+...........++ +.|+||.+| +|+|
T Consensus 201 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d----i~s~sK~l~-~G~~ 273 (424)
T 2e7u_A 201 AAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGLKPD----LVTLGKILG-GGLP 273 (424)
T ss_dssp EEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCS----EEEECGGGG-TTSS
T ss_pred EEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCCCcc----hhhhhhhhh-CCcc
Confidence 4455566554 89765 79999999999 9999999999999977 3332211122222223 238999999 6999
Q ss_pred eeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 126 LGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 126 ~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
+||++++++++ +.+.. .....+++.+++++.++.++++.... .++..++++++.+++++.|+++
T Consensus 274 ~G~~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~ 343 (424)
T 2e7u_A 274 AAAYAGRREIM--------EKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKE 343 (424)
T ss_dssp CEEEEECHHHH--------TTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcHHHH--------hhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998773 33332 11223445788888888887763211 1456777888888888888764
Q ss_pred -CCeEecCCCceEEEeecCCC--------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHH
Q 036024 200 -GIKVYGGINAPYVWAHFPGR--------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEA 264 (272)
Q Consensus 200 -g~~~~~~~~~~~~~i~l~~~--------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~ 264 (272)
++....+..|.++|+.++.. ...++...+++ +||.+.|+. ...+|+++..++++++++
T Consensus 344 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~------~~~~~~~~~~t~~~i~~~ 416 (424)
T 2e7u_A 344 KGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLD-RGIYWPPSN------FEAAFLSVAHREEDVEKT 416 (424)
T ss_dssp TTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHT-TTEECCSSS------SSCEECCTTCCHHHHHHH
T ss_pred CCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHH-CCeEEeccC------CCceEeeccCCHHHHHHH
Confidence 55322123567899998641 12356666664 599999875 235788887899999999
Q ss_pred HHHHHHhC
Q 036024 265 SRRLEALF 272 (272)
Q Consensus 265 l~~l~~~l 272 (272)
+++|+++|
T Consensus 417 l~~l~~~l 424 (424)
T 2e7u_A 417 LEALRKAL 424 (424)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999875
No 189
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.85 E-value=4.8e-21 Score=168.30 Aligned_cols=205 Identities=11% Similarity=0.065 Sum_probs=136.2
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++++++++..+||||.++ +++.+++|.++|++||+++|+||+|.++ ..+...........++ +.|+||.++ +|
T Consensus 201 ~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d----i~s~sK~l~-~G 274 (453)
T 2cy8_A 201 DIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPD----LTCLAKASA-GG 274 (453)
T ss_dssp GEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCS----EEEEEGGGG-TT
T ss_pred CEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCc----EEEEChhhh-CC
Confidence 556665555568899764 7999999999999999999999999976 4332222222222223 238999998 69
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS-EGLEAVHSVVDYYKENTKILIDTLASL--- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 199 (272)
+|+||+++++++........ ........+.+.+++++.++.+.++. . . ++..++++++.+++++.|+++
T Consensus 275 ~~~G~v~~~~~~~~~l~~~~---~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~ 347 (453)
T 2cy8_A 275 LPGGILGGREDVMGVLSRGS---DRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREAMNHLFAR 347 (453)
T ss_dssp SSCEEEEECHHHHTTSSSCC------------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEechHHHHHHhcccc---CCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999987732211100 00111223445788888888888764 3 2 345667777777777777654
Q ss_pred -CCeEecCCCceEEEeecCC-----C------------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCH
Q 036024 200 -GIKVYGGINAPYVWAHFPG-----R------------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHR 258 (272)
Q Consensus 200 -g~~~~~~~~~~~~~i~l~~-----~------------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~ 258 (272)
++....+..|.++|+.++. . + ..++...++++ ||.+.|+ +.+|+++..++
T Consensus 348 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gv~v~~~--------~~~~l~~~~t~ 418 (453)
T 2cy8_A 348 KGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILE-GVDIGGR--------GSVFLSAQHER 418 (453)
T ss_dssp TTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHT-TEECBTT--------TEEECCTTCCH
T ss_pred CCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHC-CeEEeCC--------CCEEeeccCCH
Confidence 5433223467789999874 1 1 34566667655 9999543 24788877899
Q ss_pred HHHHHHHHHHHHh
Q 036024 259 ESILEASRRLEAL 271 (272)
Q Consensus 259 ~~i~~~l~~l~~~ 271 (272)
+++++++++|+++
T Consensus 419 ~~i~~~l~~l~~~ 431 (453)
T 2cy8_A 419 EHVEHLVTTFDRV 431 (453)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 190
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.85 E-value=2.3e-19 Score=156.27 Aligned_cols=238 Identities=20% Similarity=0.203 Sum_probs=156.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...+...| +++.++++++ ++.+|++. .+++++|++++ |||...+ +++|+++|++
T Consensus 91 d~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~---l~~i~~la~~ 163 (424)
T 2po3_A 91 GEVIMPSMTFAATPHALRWIGLTPVFADIDPD-TGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCA---ADQLRKVADE 163 (424)
T ss_dssp SEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCC---HHHHHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCC---HHHHHHHHHH
Confidence 66777776665 777788888 9999999864 56566332 25788888854 8998754 9999999999
Q ss_pred cCCEEEEcccCC-ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYA-AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+|+++|+|++|. ++.+++. ++..+ .+ +++.||||..+++|.|+||++++ +++ .+.+.......
T Consensus 164 ~~~~li~Dea~~~g~~~~~~--~~~~~---~d--i~~~S~sk~K~l~~~~~G~~v~~~~~l--------~~~l~~~~~~~ 228 (424)
T 2po3_A 164 HGLRLYFDAAHALGCAVDGR--PAGSL---GD--AEVFSFHATKAVNAFEGGAVVTDDADL--------AARIRALHNFG 228 (424)
T ss_dssp TTCEEEEECTTCTTCEETTE--ETTSS---SS--EEEEECCTTSSSCCSSCEEEEESCHHH--------HHHHHHHHBTT
T ss_pred cCCEEEEECccccCCeECCe--ecccc---cC--EEEEeCCCCCCccCCCCeEEEeCCHHH--------HHHHHHHHhcC
Confidence 999999999998 4555432 22222 23 88999995555566899999998 455 44444333211
Q ss_pred cC------------CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-CCCc----eEEEeec
Q 036024 155 FN------------GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG-GINA----PYVWAHF 216 (272)
Q Consensus 155 ~~------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~----~~~~i~l 216 (272)
.. ..+..... ..+. ..+.+++..++.+++.+++.+.|.++ |+++.. +.++ .++++.+
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~aa---~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~ 303 (424)
T 2po3_A 229 FDLPGGSPAGGTNAKMSEAAAA---MGLT--SLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEI 303 (424)
T ss_dssp TTCTTCCTTCCCBCCCCHHHHH---HHHH--HHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEE
T ss_pred ccccccccccCcCCCcCHHHHH---HHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEE
Confidence 10 11222222 2221 12445677788888889999999887 888866 3322 3444676
Q ss_pred C----CCChHHHHHHHHHhcCeEeeCCCCCCCC--------------C-------CCeEEEE--ccCCHHHHHHHHHHHH
Q 036024 217 P----GRKSWDVFAEILEKTHITTVPGSGFGPG--------------G-------EEYIRIS--GFGHRESILEASRRLE 269 (272)
Q Consensus 217 ~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~--------------~-------~~~~R~s--~~~~~~~i~~~l~~l~ 269 (272)
+ +.+..++...| +++||.+.+ .|.+. . ...+|++ ...+++|+++++++|+
T Consensus 304 ~~~~~~~~~~~l~~~L-~~~gI~v~~--~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~ 380 (424)
T 2po3_A 304 DEATTGIHRDLVMEVL-KAEGVHTRA--YFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLR 380 (424)
T ss_dssp CHHHHSSCHHHHHHHH-HHTTEECBC--TTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHH
T ss_pred CCccchhhHHHHHHHH-HHCCCceec--ccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHH
Confidence 6 34555655554 556999987 23211 0 1127887 4568999999999998
Q ss_pred Hh
Q 036024 270 AL 271 (272)
Q Consensus 270 ~~ 271 (272)
++
T Consensus 381 ~~ 382 (424)
T 2po3_A 381 LC 382 (424)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 191
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.85 E-value=2.4e-19 Score=155.64 Aligned_cols=243 Identities=16% Similarity=0.163 Sum_probs=154.6
Q ss_pred cccccccCccc-chHH----hcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDE----VGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. .... ++..| +++.++.+.+ ++++ .+++++|++++|+||||.+++ +++|+++|+
T Consensus 96 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~ 167 (412)
T 2cb1_A 96 DEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPEPE-----AVREALSAKTRAVFVETVANPALLVPD---LEALATLAE 167 (412)
T ss_dssp CEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSSHH-----HHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCHH-----HHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHH
Confidence 55666666554 2322 45577 8888887511 2222 257899999999999999987 999999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccc--------cCC-------
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF--------SSG------- 140 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~--------~~~------- 140 (272)
++|+++|+|++|..+.... .+. .. +..+++.|+||.++.+|.|+|++++.++... ...
T Consensus 168 ~~~~~li~D~~~~~~~~~~--~~~-~~----~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (412)
T 2cb1_A 168 EAGVALVVDNTFGAAGALC--RPL-AW----GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPW 240 (412)
T ss_dssp HHTCEEEEECGGGTTTTSC--CGG-GG----TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------H
T ss_pred HcCCEEEEECCCccccccC--Ccc-cc----CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchh
Confidence 9999999999998652211 111 11 3449999999999889999999887663210 000
Q ss_pred -----cchHHHHHhhh-hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cC------
Q 036024 141 -----FPVINDFNRII-CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY-GG------ 206 (272)
Q Consensus 141 -----~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~------ 206 (272)
..+.+.++... .......+......+...++ .+.+..++.+++.+++.+.|.+. ++... .|
T Consensus 241 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~-----~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p 315 (412)
T 2cb1_A 241 EALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLE-----TVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDP 315 (412)
T ss_dssp HHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGG-----GHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCT
T ss_pred hccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCc-----hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCc
Confidence 01122232222 11111223333332222222 23455566778899999999886 77633 22
Q ss_pred ----------CCceEEEeecCCCChHHHHHHHHHhcCeEeeCCC---------CCCCC---------------CCCeEEE
Q 036024 207 ----------INAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS---------GFGPG---------------GEEYIRI 252 (272)
Q Consensus 207 ----------~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~---------~~~~~---------------~~~~~R~ 252 (272)
..+.++.+.+ + + .+...+++++.||.+ .++ .+... ..+.+|+
T Consensus 316 ~~~~~~~~~~~~~~iv~~~~-~-~-~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~ 391 (412)
T 2cb1_A 316 AHRNARKYLASGGPILTLDL-G-D-LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRV 391 (412)
T ss_dssp THHHHHHHCSSSCSEEEEEC-S-S-HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEE
T ss_pred cHHHHHHhCCCCceEEEEEe-C-C-HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEE
Confidence 2356788888 4 4 445566677779999 774 33210 1579999
Q ss_pred Ecc--CCHHHHHHHHHHHHH
Q 036024 253 SGF--GHRESILEASRRLEA 270 (272)
Q Consensus 253 s~~--~~~~~i~~~l~~l~~ 270 (272)
|+. +++++++.+.++|++
T Consensus 392 s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 392 SVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp ECCSSCHHHHHHHHHHHHHC
T ss_pred EeccCCHHHHHHHHHHHHhh
Confidence 974 478889999998875
No 192
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.85 E-value=1.2e-20 Score=166.56 Aligned_cols=204 Identities=11% Similarity=0.023 Sum_probs=142.2
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++++|++..++|++|.+. +++.+++|.++|+++|+++|+||+|.++...+...........++ + .++||.+|..|
T Consensus 223 ~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pd--i--~t~sK~l~gg~ 298 (472)
T 3hmu_A 223 RVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPH--I--MTIAKGLSSGY 298 (472)
T ss_dssp GEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS--E--EEECGGGTTTS
T ss_pred CEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCc--e--eeechhhhcCC
Confidence 445555556677778755 888899999999999999999999998765553322223332333 2 26899998445
Q ss_pred cceeEEEecccccccCCcchHHHHH--hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHH-HHHHHHHHHHHhC-
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFN--RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK-ENTKILIDTLASL- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~- 199 (272)
+|+||++++++. ++.+. ......+++.+++++.|+.+.++.... +...++++ ++.+++++.|+++
T Consensus 299 ~plG~v~~~~~i--------~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~~l~~~L~~l~ 367 (472)
T 3hmu_A 299 APIGGSIVCDEV--------AHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVRNVAAPYLKEKWEALT 367 (472)
T ss_dssp SCCEEEEEEHHH--------HHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHTHHHHHHHHHHGGG
T ss_pred cceEEEEECHHH--------HHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998888 55552 123334556888999998888873222 34566777 7777888877664
Q ss_pred ---CCeEecCCCceEEEeecCCCC-------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHH
Q 036024 200 ---GIKVYGGINAPYVWAHFPGRK-------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESI 261 (272)
Q Consensus 200 ---g~~~~~~~~~~~~~i~l~~~~-------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i 261 (272)
.+....+ .|.++++.+.... ..++...++++ ||.+.|+. +++|++ +..+++++
T Consensus 368 ~~~~v~~vr~-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g-------~~iRi~p~~~~t~e~i 438 (472)
T 3hmu_A 368 DHPLVGEAKI-VGMMASIALTPNKASRAKFASEPGTIGYICRERCFAN-NLIMRHVG-------DRMIISPPLVITPAEI 438 (472)
T ss_dssp GSTTEEEEEE-ETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHT-TBCCEEET-------TEEEECCCTTCCHHHH
T ss_pred cCCCeEEEEe-cCceEEEEEecCccccccccchhHHHHHHHHHHHHHC-CcEEEecC-------CEEEEECCCCCCHHHH
Confidence 2333443 4667777775211 34556666665 99998752 789999 56799999
Q ss_pred HHHHHHHHHhC
Q 036024 262 LEASRRLEALF 272 (272)
Q Consensus 262 ~~~l~~l~~~l 272 (272)
++++++|++++
T Consensus 439 ~~~l~~l~~~l 449 (472)
T 3hmu_A 439 DEMFVRIRKSL 449 (472)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998763
No 193
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.84 E-value=1.8e-19 Score=155.18 Aligned_cols=243 Identities=16% Similarity=0.097 Sum_probs=156.6
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...+...| +++.++.+++ ++.+|++.+ +++++++ ++||||...+ +++|.++|++
T Consensus 97 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~---~~~i~~l~~~ 169 (391)
T 3dr4_A 97 DEVIVPSLTYIASANSVTYCGATPVLVDNDPR-TFNLDAAKLEALITPRTKAIM---PVHLYGQICD---MDPILEVARR 169 (391)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred CEEEECCCchHHHHHHHHHCCCEEEEEecCcc-ccCcCHHHHHHhcCCCceEEE---EECCCCChhh---HHHHHHHHHH
Confidence 56777766665 777778888 9999999855 455564442 5677766 5689999876 8889999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+|+++|+|++|....... ......+ .+ +.+.||| |.++ + .+.|+++.+++.+ .+.+.......
T Consensus 170 ~~~~li~D~a~~~g~~~~-~~~~~~~---~d--i~~~S~s~~K~l~-~-g~gg~~~~~~~~~-------~~~~~~~~~~g 234 (391)
T 3dr4_A 170 HNLLVIEDAAEAVGATYR-GKKSGSL---GD--CATFSFFGNAIIT-T-GEGGMITTNDDDL-------AAKMRLLRGQG 234 (391)
T ss_dssp TTCEEEEECTTCTTCEET-TEETTSS---SS--EEEEECBTTSSSC-C-BSCEEEEESCHHH-------HHHHHHHHBTT
T ss_pred cCCEEEEECcccccceEC-Ceeeccc---CC--EEEEECCCCCcCC-c-CCeEEEEECCHHH-------HHHHHHHHhcC
Confidence 999999999998533211 1111111 12 6666766 7775 3 5689988877642 33333322111
Q ss_pred cC------------CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC--C----C-ceEEEee
Q 036024 155 FN------------GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG--I----N-APYVWAH 215 (272)
Q Consensus 155 ~~------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~----~-~~~~~i~ 215 (272)
.. ........++..... ...+++..++.+++.+++++.|.++|+.+..+ . . ...+++.
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~l~aa~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~ 311 (391)
T 3dr4_A 235 MDPNRRYWFPIVGFNYRMTNIQAAIGLAQ---LERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVR 311 (391)
T ss_dssp CCTTSTTCCSSCCCBCBCCHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEE
T ss_pred CCCCCcccccccccccCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEE
Confidence 10 012222232333332 23446677888889999999999888877654 1 1 2235666
Q ss_pred cCC---CChHHHHHHHHHhcCeEeeCCCCC---CCC---------------CCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 216 FPG---RKSWDVFAEILEKTHITTVPGSGF---GPG---------------GEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 216 l~~---~~~~~~~~~ll~~~gi~v~~g~~~---~~~---------------~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
++. .+..++...|.++ ||.+.++... .+. ..+.+|+++ ..+++|++++++.|++++
T Consensus 312 ~~~~~~~~~~~l~~~L~~~-GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 312 LGEGLSTTRDQVIKDLDAL-GIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp ECSSCSSCHHHHHHHHHHT-TCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred ECCccchhHHHHHHHHHHC-CCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 663 3456666666555 9999987521 110 135789986 459999999999999875
No 194
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.84 E-value=5.7e-20 Score=163.37 Aligned_cols=255 Identities=14% Similarity=0.046 Sum_probs=164.2
Q ss_pred ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
.|++..+... +...++..| +++.+|++++ ++.+|++. .+++++|++++|+||||.+.+ +++|.++|+++
T Consensus 156 ~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~ 231 (502)
T 3hbx_A 156 NIVTGANVQVCWEKFARYFEVELKEVKLSEG-YYVMDPQQAVDMVDENTICVAAILGSTLNGEFED---VKLLNDLLVEK 231 (502)
T ss_dssp EEEEETTCCHHHHHHHHHTTCEEEEECCBTT-BCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC---HHHHHHHHHHH
T ss_pred EEEEcCCchHHHHHHHHHcCceeEEEecCCC-cCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccC---HHHHHHHHHHh
Confidence 4555544444 777788889 9999998764 46666443 267889999999999999977 88889999998
Q ss_pred ------CCEEEEcccCCcccc---CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHH
Q 036024 78 ------GSIIIFDSAYAAYVT---DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDF 147 (272)
Q Consensus 78 ------~~~vi~D~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~ 147 (272)
++++++|++|+++.. .+....... ...-.++..|.+|.++ .+.++||++..+.. +...+......+
T Consensus 232 ~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~~~~~yl 307 (502)
T 3hbx_A 232 NKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHINYL 307 (502)
T ss_dssp HHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEECSS
T ss_pred hhccCCCCeEEEECCccchhhhhhCcccccccC---CCCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhccCcccc
Confidence 999999999986542 221111111 1223367778899875 56678998876543 211100000000
Q ss_pred Hhhhhh--ccCCc---chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecC-CCceEEEeecCC--
Q 036024 148 NRIICT--CFNGA---SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGG-INAPYVWAHFPG-- 218 (272)
Q Consensus 148 ~~~~~~--~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~i~l~~-- 218 (272)
...... ...+. ...++.++...+ +.+.+.++.++..++++++.+.|++++ +++..+ ...+++++.+++
T Consensus 308 ~~~~~~~~~~~sr~~~~~~a~~~al~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~ 384 (502)
T 3hbx_A 308 GADQPTFTLNFSKGSSQVIAQYYQLIRL---GHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSS 384 (502)
T ss_dssp SSCEEECCSCCSCBSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCS
T ss_pred cCCCCCccccCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCC
Confidence 000000 00111 233333333333 334557888999999999999999985 888775 567788888864
Q ss_pred -CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 219 -RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 219 -~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
.+..++...|.++ ||.+....... ..+...+|+++. .++++++.+++.|+++
T Consensus 385 ~~~~~~l~~~L~~~-Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~ 440 (502)
T 3hbx_A 385 CHTEFEISDMLRRY-GWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKV 440 (502)
T ss_dssp SCCHHHHHHHHHTT-TCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhC-CcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 2334666666555 99875432221 234568999974 4899999999988875
No 195
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.84 E-value=2.6e-20 Score=164.17 Aligned_cols=211 Identities=15% Similarity=0.129 Sum_probs=136.5
Q ss_pred CceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCc-c---------ccCCCCCCccccC----CCCCce
Q 036024 45 RTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAA-Y---------VTDGCPRSIYEIP----GAREVA 109 (272)
Q Consensus 45 ~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~-~---------~~~~~~~~~~~~~----~~~~~~ 109 (272)
++++|++++|+||| |.+++.+++++|+++|++||+++|+|+++.. . .+.+ .+...+. ...+
T Consensus 183 ~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g--~~~~~~~~~~~~~~d-- 258 (467)
T 2oqx_A 183 NVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKD--WTIEQITRETYKYAD-- 258 (467)
T ss_dssp GCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTT--SCHHHHHHHHGGGCS--
T ss_pred ceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccC--ccHHHHhhhhhccCC--
Confidence 78999999999998 8999999999999999999999999977643 1 2222 2222221 1123
Q ss_pred EEEecCccccCCC-ccceeEEEeccc-ccccCCcchHHHHHhhh--hhc---cCCcchHHHHHHHHhcccccHHHHHHHH
Q 036024 110 IEISSFSKFSGFT-GVRLGWTVVPEE-LLFSSGFPVINDFNRII--CTC---FNGASNIAQAGGLACLSSEGLEAVHSVV 182 (272)
Q Consensus 110 i~~~s~sK~~g~~-g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 182 (272)
+++.|+||.+|.| | ||++++++ ++. ....+.... ... ....+..+..++...+..... ++..
T Consensus 259 ~~~~s~sK~~g~~~G---g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~ 327 (467)
T 2oqx_A 259 MLAMSAKKDAMVPMG---GLLCMKDDSFFD-----VYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWL 327 (467)
T ss_dssp EEEEESSSTTCCSSC---EEEEECSGGGHH-----HHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHH
T ss_pred eEEEecccccCCCCc---eEEEecChhHHH-----HHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HHHH
Confidence 4578999999866 4 78887776 311 022222221 111 111222222222222221110 2344
Q ss_pred HHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC----CCC-----hHHHHHHHHHhcCeEeeCCCCC--CC-------
Q 036024 183 DYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP----GRK-----SWDVFAEILEKTHITTVPGSGF--GP------- 244 (272)
Q Consensus 183 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~----~~~-----~~~~~~~ll~~~gi~v~~g~~~--~~------- 244 (272)
++.+++.+++.+.|.++|+.+. +.+++++|+.++ +.+ ...+...|++++||.+.|+..| +.
T Consensus 328 ~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~ 406 (467)
T 2oqx_A 328 AYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQ 406 (467)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSB
T ss_pred HHHHHHHHHHHHHHHHCCCeee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceeccccccccccccccccc
Confidence 5567888999999988888877 678889999873 223 2234666646669999985543 11
Q ss_pred --CCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 245 --GGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 245 --~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
.+.+++|+++. .+++++++++++|+++
T Consensus 407 ~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~ 438 (467)
T 2oqx_A 407 LPCPAELLRLTIPRATYTQTHMDFIIEAFKHV 438 (467)
T ss_dssp CCCSCCEEEECCCTTTSCHHHHHHHHHHHHHH
T ss_pred ccCccCeEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 12479999975 7899999999999875
No 196
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.83 E-value=4e-19 Score=151.94 Aligned_cols=237 Identities=13% Similarity=0.030 Sum_probs=154.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
|.|++..+.+. +...+...| +++.+++++++.+.++ +++ .++++++++++| ||.+.+ +++|.++|+++|
T Consensus 75 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~ 148 (375)
T 2fnu_A 75 NEIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHS 148 (375)
T ss_dssp CEEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHT
T ss_pred CEEEECCCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcC
Confidence 56777766555 777777788 9999999866433333 322 257888888766 999987 889999999999
Q ss_pred CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEec--ccccccCCcchHHHHHhhhhhc
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVP--EELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+++|+|++|..+.... ... +.... .+.+.|+| |.+| +| +|++++. +++ .+.+.......
T Consensus 149 ~~li~D~a~~~~~~~~-~~~---~~~~~--~i~~~s~s~~K~~~-~g--~g~~~~~~~~~~--------~~~~~~~~~~~ 211 (375)
T 2fnu_A 149 LSFLSDSSHALGSEYQ-NKK---VGGFA--LASVFSFHAIKPIT-TA--EGGAVVTNDSEL--------HEKMKLFRSHG 211 (375)
T ss_dssp CEEEEECTTCTTCEET-TEE---TTSSS--SEEEEECCTTSSSC-CS--SCEEEEESCHHH--------HHHHHHHTBTT
T ss_pred CEEEEECccccCCeEC-Cee---ccccC--CeEEEeCCCCCCcc-cc--CceEEEeCCHHH--------HHHHHHHHhcC
Confidence 9999999998643221 111 21112 27778888 9997 46 7888874 334 34443332111
Q ss_pred c----------------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC----C-ceEE
Q 036024 155 F----------------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI----N-APYV 212 (272)
Q Consensus 155 ~----------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~-~~~~ 212 (272)
. ...+.+.. +..... .+++++..++.+++++++.+.|+++ |+++..+. . ..++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
T 2fnu_A 212 MLKKDFFEGEVKSIGHNFRLNEIQS--ALGLSQ---LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLY 286 (375)
T ss_dssp EEESSSSCEEESSCCCBCCCCHHHH--HHHHHH---HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCE
T ss_pred CccccccccccccccccCCCCHHHH--HHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEE
Confidence 0 11222222 222222 2345778889999999999999997 88876652 2 3455
Q ss_pred EeecCC--C-ChHHHHHHHHHhcCeEeeCCCCCCCC---------------------CCCeEEEEcc--CCHHHHHHHHH
Q 036024 213 WAHFPG--R-KSWDVFAEILEKTHITTVPGSGFGPG---------------------GEEYIRISGF--GHRESILEASR 266 (272)
Q Consensus 213 ~i~l~~--~-~~~~~~~~ll~~~gi~v~~g~~~~~~---------------------~~~~~R~s~~--~~~~~i~~~l~ 266 (272)
++.++. . +..++...|. ++||.+..+ |.+. ..+++|+++. .++++++++++
T Consensus 287 ~~~~~~~~~~~~~~l~~~L~-~~gi~v~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~ 363 (375)
T 2fnu_A 287 PILMHQKFFTCKKLILESLH-KRGILAQVH--YKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAH 363 (375)
T ss_dssp EEEECGGGGGGHHHHHHHHH-HTTEECBCC--CCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHH
T ss_pred EEEeCccccchHHHHHHHHH-HCCCCcccc--ccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHH
Confidence 777763 2 4556666665 559999832 2211 1267999975 48999999999
Q ss_pred HHHHh
Q 036024 267 RLEAL 271 (272)
Q Consensus 267 ~l~~~ 271 (272)
+|+++
T Consensus 364 ~l~~~ 368 (375)
T 2fnu_A 364 SVLKT 368 (375)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 197
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.83 E-value=1.8e-18 Score=151.25 Aligned_cols=247 Identities=13% Similarity=0.133 Sum_probs=155.0
Q ss_pred cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCC-CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGT-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +.... +..| +++.++. . ++.+|++.+ +++++|++++| ||||.+.+ +++|+++|++
T Consensus 151 d~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~--~~~~d~~~i~~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~ 223 (438)
T 1wyu_A 151 MGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-E--GGRTPLPEVGEEVGAVVVQNP-NFLGALED---LGPFAEAAHG 223 (438)
T ss_dssp CEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-B--TTBCCCCCCCTTEEEEEEESS-CTTSBCCC---HHHHHHHHHH
T ss_pred CEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-c--CCccCHHHhCCCeEEEEEECC-CCCeEEec---HHHHHHHHHH
Confidence 56677665544 54333 3468 9999887 2 235555443 67899999999 99999986 9999999999
Q ss_pred cCCEEEEccc-CCccccCCCCCCccccCCCCCceEEEecCccccC----CCccceeEEEecccccccCCcch--------
Q 036024 77 NGSIIIFDSA-YAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG----FTGVRLGWTVVPEELLFSSGFPV-------- 143 (272)
Q Consensus 77 ~~~~vi~D~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~r~G~~~~~~~~~~~~~~~~-------- 143 (272)
+|+++++|.. .+ + +. ......+. .| ++++| +|.|| +.|.++||+++++++.+......
T Consensus 224 ~g~~vivd~d~~a-~--g~-~~~~~~~g--~D--~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~ 294 (438)
T 1wyu_A 224 AGALFVAVADPLS-L--GV-LKPPGAYG--AD--IAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVE 294 (438)
T ss_dssp TTCEEEEECCTTG-G--GT-BCCHHHHT--CS--EEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTT
T ss_pred cCCEEEEEechhh-c--cC-cCCCccCC--CC--EEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccC
Confidence 9999996622 21 1 11 01112221 12 66666 66543 44668999999887743321100
Q ss_pred -----------HHHHHhhhhhccCC--cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCc
Q 036024 144 -----------INDFNRIICTCFNG--ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINA 209 (272)
Q Consensus 144 -----------~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 209 (272)
.+.-.+....+... .+.....++...+...+.+.++++.++++++++++.+.|+++ |+++..+. .
T Consensus 295 ~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~ 373 (438)
T 1wyu_A 295 GRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-P 373 (438)
T ss_dssp SCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-S
T ss_pred CCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-C
Confidence 00000111111111 122222111111332233457888999999999999999998 99988753 3
Q ss_pred eE--EEeecCCCChHHHHHHHHHhcCeEe--eCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 210 PY--VWAHFPGRKSWDVFAEILEKTHITT--VPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 210 ~~--~~i~l~~~~~~~~~~~ll~~~gi~v--~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
.+ +.+..+ .+..++..+|.++ ||.+ .++..|. .+++|+++. ++++++++++++|++++
T Consensus 374 ~~~~~~~~~~-~~~~~~~~~L~~~-gi~v~~~~~~~~~---~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 374 FFNEFALALP-KDPEAVRRALAER-GFHGATPVPREYG---ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp BCSEEEEECS-SCHHHHHHHHHHT-TCCCCEECCTTSC---SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred eEEEEEEeCC-CCHHHHHHHHHHC-CceeccccccccC---CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 33 334443 3567777777766 9999 6777664 579999975 68999999999998864
No 198
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.82 E-value=1.3e-18 Score=150.85 Aligned_cols=240 Identities=14% Similarity=0.084 Sum_probs=151.5
Q ss_pred cccccccCccc-ch----HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LE----DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. .. ..++..| +++.++.+.-.. +++ .+++|+|++++|+||||.+++ +++|+++|+
T Consensus 122 d~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~----le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~ 194 (415)
T 2fq6_A 122 DHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGAD----IVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVR 194 (415)
T ss_dssp CEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGG----GGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHH----HHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHH
Confidence 55666654333 22 2345678 888887652111 222 267899999999999999997 899999999
Q ss_pred H--cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc-eeEEEecccccccCCcchHHHHHhhhh
Q 036024 76 N--NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR-LGWTVVPEELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 76 ~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
+ +|+++++|++|...... .++ .+ +..+++.|++|.+|.+|.+ .||++++++. .+.+.....
T Consensus 195 ~~~~g~~livD~a~a~~~~~---~p~-~~----g~Div~~S~sK~lg~~g~~~~G~l~~~~~~--------~~~l~~~~~ 258 (415)
T 2fq6_A 195 SVVPDAIIMIDNTWAAGVLF---KAL-DF----GIDVSIQAATKYLVGHSDAMIGTAVCNARC--------WEQLRENAY 258 (415)
T ss_dssp HHCTTCEEEEECTTTTTTSS---CGG-GG----TCSEEEEETTTTTTCSSSCCCEEEEECTTT--------HHHHHHHHH
T ss_pred hhcCCCEEEEECCCcccccC---Ccc-cc----CCeEEEEeCccccCCCCCceEEEEEeCHHH--------HHHHHHHHH
Confidence 9 99999999999853221 122 22 2238999999999977755 6998888765 455544443
Q ss_pred hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC----------------CCceEEEe
Q 036024 153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG----------------INAPYVWA 214 (272)
Q Consensus 153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~i 214 (272)
......+......+... .+.+..+.++..++.+.+.+.|++. .+. +..| ..+..+++
T Consensus 259 ~~G~~~~~~~a~~~~~~-----l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf 333 (415)
T 2fq6_A 259 LMGQMVDADTAYITSRG-----LRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSF 333 (415)
T ss_dssp HTTCCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEE
T ss_pred hcCCCCCHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE
Confidence 22222333332222222 2344666777788899999999886 232 2111 14667888
Q ss_pred ecCCCChHHHHHHHHH---hcCeEeeCCCCCC------------------C-CCCCeEEEEccC--CHHHHHHHHHHHHH
Q 036024 215 HFPGRKSWDVFAEILE---KTHITTVPGSGFG------------------P-GGEEYIRISGFG--HRESILEASRRLEA 270 (272)
Q Consensus 215 ~l~~~~~~~~~~~ll~---~~gi~v~~g~~~~------------------~-~~~~~~R~s~~~--~~~~i~~~l~~l~~ 270 (272)
.+++....+....+++ ..++.+..|+.+. . ...+.+|+|++. ++++++.+.++|++
T Consensus 334 ~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 334 VLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp EESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred EECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 9975311222333443 3356666664422 0 124789999743 67778888888876
Q ss_pred h
Q 036024 271 L 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 414 ~ 414 (415)
T 2fq6_A 414 I 414 (415)
T ss_dssp T
T ss_pred h
Confidence 5
No 199
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.82 E-value=3.1e-19 Score=152.67 Aligned_cols=240 Identities=13% Similarity=0.113 Sum_probs=150.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...++..| +++.++.+. ++.+|++.+ +++++++ |+||||...+ +++|.++|++
T Consensus 79 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~---~~~i~~~~~~ 150 (374)
T 3uwc_A 79 DEVITCANTFIASVGAIVQAGATPVLVDSEN--GYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD---MPALAKIAKK 150 (374)
T ss_dssp CEEEEESSSCHHHHHHHHHTTCEEEEECBCT--TSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEecCC--CCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC---HHHHHHHHHH
Confidence 56777766655 777788888 999999983 455554432 4666666 8999999877 8899999999
Q ss_pred cCCEEEEcccCCcccc-CCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYVT-DGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|+++|+|++|..+.. ++ ...... .+ +++.|+| |.+|.+|. .|+++++++.+ .+.+......
T Consensus 151 ~~~~li~D~~~~~g~~~~~--~~~~~~---~d--~~~~s~~~~K~l~~~g~-~g~~~~~~~~~-------~~~~~~~~~~ 215 (374)
T 3uwc_A 151 HNLHIVEDACQTILGRIND--KFVGSW---GQ--FACFSLHPLKNLNVWSD-AGVIITHSDEY-------AEKLRLYRNH 215 (374)
T ss_dssp TTCEEEEECTTCTTCEETT--EETTSS---SS--EEEEECSSSSSSCCSSC-CEEEEESCHHH-------HHHHHHHTBT
T ss_pred cCCEEEEeCCCccCceeCC--eecccc---cc--EEEEeCCCCCcCCccce-eEEEEeCCHHH-------HHHHHHHHhc
Confidence 9999999999986432 21 111111 12 6777766 99984465 78888876542 3333332210
Q ss_pred ------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEecCC-CceEEE--eec
Q 036024 154 ------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG--IKVYGGI-NAPYVW--AHF 216 (272)
Q Consensus 154 ------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~-~~~~~~--i~l 216 (272)
.....+.. .++...... +.+++..++.+++.+++++.|.+++ +.+.... .+...| +.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~--~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (374)
T 3uwc_A 216 GLINRDVCVEYGINCRMDTI--QAVIANRLM---NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVL 290 (374)
T ss_dssp TEEETTEESSCCCBCBCCHH--HHHHHHHHG---GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEE
T ss_pred CccccCccccccccCCCCHH--HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEE
Confidence 11111222 222222221 2346677888889999999999874 6664322 222221 222
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCC----C---------C--------CCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 217 PGRKSWDVFAEILEKTHITTVPGSGFG----P---------G--------GEEYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~----~---------~--------~~~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
...+..++...|.++ ||.+.++.... + . ..+.+|+++ ..+++|++++++.|++++
T Consensus 291 ~~~~~~~l~~~L~~~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 368 (374)
T 3uwc_A 291 RVKYRDQLFQYLKDN-GIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFY 368 (374)
T ss_dssp EETTHHHHHHHHHHT-TBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHC-CCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 222455666665555 99998875211 0 0 026799986 458999999999998763
No 200
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.82 E-value=1.8e-19 Score=156.56 Aligned_cols=240 Identities=16% Similarity=0.101 Sum_probs=156.5
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...+...| +++.++.+++ ++.+|++. .+++++|+++ ||||...+ +++|.++|++
T Consensus 83 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~~~~~ 155 (418)
T 2c81_A 83 DEVIVPSLTWIATATAVLNVNALPVFVDVEAD-TYCIDPQLIKSAITDKTKAIIPV---HLFGSMAN---MDEINEIAQE 155 (418)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHGGGCCTTEEEECCB---CCTTCCCC---HHHHHHHHHH
T ss_pred CEEEECCCccHhHHHHHHHcCCEEEEEecCCC-CCCcCHHHHHHhhCCCCeEEEEe---CCcCCccc---HHHHHHHHHH
Confidence 56777766555 777778888 9999999763 45555332 2577887764 58998755 8999999999
Q ss_pred cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEec-ccccccCCcchHHHHHhhhh
Q 036024 77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIIC 152 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~ 152 (272)
+|+++|+|++|..+. +++. ++..+ .+ +.+.|| ||.+|. | |+||++++ +++ .+.+.....
T Consensus 156 ~~~~li~D~a~~~~~~~~~~--~~~~~---~~--~~~~s~s~~K~~~~-g-~~g~~~~~~~~l--------~~~~~~~~~ 218 (418)
T 2c81_A 156 HNLFVIEDCAQSHGSVWNNQ--RAGTI---GD--IGAFSCQQGKVLTA-G-EGGIIVTKNPRL--------FELIQQLRA 218 (418)
T ss_dssp TTCEEEEECTTCTTCEETTE--ETTSS---SS--EEEEECCTTSSSCS-S-SCEEEEESCHHH--------HHHHHHHHB
T ss_pred CCCEEEEECcccccCccCCE--ecccc---cc--eEEEeccCCcccCC-C-CeEEEEECCHHH--------HHHHHHHHH
Confidence 999999999999765 4332 12122 12 667777 999985 8 99999986 444 333433221
Q ss_pred hcc------------CC-----cc--------hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-
Q 036024 153 TCF------------NG-----AS--------NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG- 205 (272)
Q Consensus 153 ~~~------------~~-----~~--------~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~- 205 (272)
... .. .. ...+. +... ...+++++..++.+++++++.+.|.++ |+++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a-a~~~---~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 294 (418)
T 2c81_A 219 DSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQS-AILL---DQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKR 294 (418)
T ss_dssp TTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHH-HHHH---HHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCC
T ss_pred hCccccccccccccchhhccccccccCcCCCcCHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCC
Confidence 110 00 00 11111 1111 111234667788888899999999887 888874
Q ss_pred CCC-ceE----EEeecC-----CCChHHHHHHHHHhcCeE---eeCCCCCCC--------------------------CC
Q 036024 206 GIN-APY----VWAHFP-----GRKSWDVFAEILEKTHIT---TVPGSGFGP--------------------------GG 246 (272)
Q Consensus 206 ~~~-~~~----~~i~l~-----~~~~~~~~~~ll~~~gi~---v~~g~~~~~--------------------------~~ 246 (272)
+++ +.. +.+.++ +.+..++...|.+++||. +.++..... ..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (418)
T 2c81_A 295 PPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLH 374 (418)
T ss_dssp CTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCC
T ss_pred CCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCC
Confidence 333 222 226666 345667777776666999 887752210 00
Q ss_pred --------CCeEEEEc--cC-CHHHHHHHHHHHHHh
Q 036024 247 --------EEYIRISG--FG-HRESILEASRRLEAL 271 (272)
Q Consensus 247 --------~~~~R~s~--~~-~~~~i~~~l~~l~~~ 271 (272)
.+.+|+++ .. +++|++++++.|+++
T Consensus 375 ~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~ 410 (418)
T 2c81_A 375 YPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAEL 410 (418)
T ss_dssp CHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHH
Confidence 15899997 55 999999999999875
No 201
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.81 E-value=9.8e-19 Score=152.17 Aligned_cols=248 Identities=17% Similarity=0.121 Sum_probs=145.6
Q ss_pred cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
|.|++..+.+. +.. .+...| +++.++.+.-..+.--+ .+++++|++++|+||||.+++ +++|+++|+++
T Consensus 122 d~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai--~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~ 196 (430)
T 3ri6_A 122 DSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHAC--DETTKLLFLETISNPQLQVAD---LEALSKVVHAK 196 (430)
T ss_dssp CEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTT
T ss_pred CEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhh--CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc
Confidence 56666665554 444 556788 99998876111111102 268999999999999999987 88999999999
Q ss_pred CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe--ccccccc--CCcc---------hH
Q 036024 78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PEELLFS--SGFP---------VI 144 (272)
Q Consensus 78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~~~~~~--~~~~---------~~ 144 (272)
|+++|+|++|..... ....... ..+++.|+||.+|.+|..+|.+++ .+..... .... ++
T Consensus 197 g~~livD~a~~~~~~----~~~~~~g----~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i 268 (430)
T 3ri6_A 197 GIPLVVDTTMTPPYL----LEAKRLG----VDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFL 268 (430)
T ss_dssp TCCEEEECTTSCTTT----CCGGGGT----CSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHH
T ss_pred CCEEEEECCCccccc----CChHHcC----CEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHH
Confidence 999999999985332 1112221 238999999999866655555554 2211100 0000 01
Q ss_pred HHHHh-hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCC--------------
Q 036024 145 NDFNR-IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGI-------------- 207 (272)
Q Consensus 145 ~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-------------- 207 (272)
..... .........+..... +...+.+.+..+.++..++++.+.+.|++. +++ +..|.
T Consensus 269 ~~~~~~~~~~~g~~~~~~~a~-----l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~ 343 (430)
T 3ri6_A 269 YKARKEVFQNLGPSLSPHNAY-----LQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQF 343 (430)
T ss_dssp HHHHHTHHHHHCCCCCHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCHHHHH-----HHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhC
Confidence 11111 111122222322221 111233555667778889999999999887 554 44332
Q ss_pred --CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccCCHHHHHHH
Q 036024 208 --NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFGHRESILEA 264 (272)
Q Consensus 208 --~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~~~~~i~~~ 264 (272)
+|+++|+.+++......+...++..++.+.+|..++. ..++.+|+|+.. |+.+.+
T Consensus 344 g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl 421 (430)
T 3ri6_A 344 RYAGSILTFELESKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDL 421 (430)
T ss_dssp SSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHH
T ss_pred CCCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHH
Confidence 3349999998322222333334455677777776651 136789999854 333334
Q ss_pred HHHHHHh
Q 036024 265 SRRLEAL 271 (272)
Q Consensus 265 l~~l~~~ 271 (272)
++.|+++
T Consensus 422 ~~dl~~a 428 (430)
T 3ri6_A 422 KEDILQA 428 (430)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4444443
No 202
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.80 E-value=8.6e-18 Score=148.01 Aligned_cols=233 Identities=14% Similarity=0.094 Sum_probs=150.0
Q ss_pred eEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCCC
Q 036024 25 IEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCPR 97 (272)
Q Consensus 25 ~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~~ 97 (272)
+++++++++ .+.+|++++ +++|+|++++++||+. .+ +++|.++|+++|+++++|++|. ++...+...
T Consensus 178 ~~~~~vd~~-~~~iD~d~le~~l~~~~~klIi~~~s~~~~~--~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~ 251 (490)
T 2a7v_A 178 SMPYKLNPK-TGLIDYNQLALTARLFRPRLIIAGTSAYARL--ID---YARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp ---CCBCTT-TCSBCHHHHHHHHHHHCCSEEEECCSSCCSC--CC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC
T ss_pred EEecccccc-cCCcCHHHHHHHHhhcCCcEEEEcCCCCCCc--cc---HHHHHHHHHHcCCEEEEccccccccccCCcCC
Confidence 445555544 455664432 4689998888898853 34 8999999999999999999986 334343222
Q ss_pred CccccCCCCCceEEEecCccccCCCccceeEEEecccccccC-------CcchHHHHHhhhhhcc-CCcchHHHHHHHHh
Q 036024 98 SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-------GFPVINDFNRIICTCF-NGASNIAQAGGLAC 169 (272)
Q Consensus 98 ~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~ 169 (272)
.... . .| +++.|+||+++ |.|.|++++++++.... ...+...+........ .+++.....++..+
T Consensus 252 ~~~~--~-aD--iv~~S~hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~A 324 (490)
T 2a7v_A 252 SPFK--H-AD--IVTTTTHKTLR--GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVA 324 (490)
T ss_dssp CGGG--T-CS--EEEEESSGGGC--SCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHH
T ss_pred CCCC--C-CC--EEEECCcccCc--cccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHH
Confidence 2221 1 12 88899999884 45679999987632100 0012444544443332 22344434444444
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCC--CChHHHHHHHHHhcCeEeeCCCCCC---
Q 036024 170 LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPG--RKSWDVFAEILEKTHITTVPGSGFG--- 243 (272)
Q Consensus 170 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~v~~g~~~~--- 243 (272)
+........++..+++.++++++.+.|.+.|+++.. +.+.+++|+.+.. .+. +.+.++|++.||.+..+..++
T Consensus 325 l~~~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~~~-~~~~~~L~~~GI~v~~~~~p~d~~ 403 (490)
T 2a7v_A 325 LKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDG-ARAERVLELVSITANKNTCPGDRS 403 (490)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCCH-HHHHHHHHHTTEECEEECCTTCCC
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCCCH-HHHHHHHHhCCeEEecCccCCCCC
Confidence 442222344788899999999999999999999865 3456789999863 344 445666677899998654333
Q ss_pred CCCCCeEEEEc------cCCHHHHHHHHHHHHHh
Q 036024 244 PGGEEYIRISG------FGHRESILEASRRLEAL 271 (272)
Q Consensus 244 ~~~~~~~R~s~------~~~~~~i~~~l~~l~~~ 271 (272)
+..++.+|++. ..+++|++++.+.|.++
T Consensus 404 p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~ 437 (490)
T 2a7v_A 404 AITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG 437 (490)
T ss_dssp SSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCceEecccccccCCCCHHHHHHHHHHHHHH
Confidence 33467899974 23789999999888765
No 203
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.80 E-value=1.1e-18 Score=154.57 Aligned_cols=242 Identities=8% Similarity=-0.074 Sum_probs=154.5
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCc------eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRT------DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~------~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
+...++..| +++.+|++. ++.+|++.+ +++ .++++++|+||||.+-+ +++|+++|+++|++++
T Consensus 195 ~~~~~~~~G~~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~---l~~I~~la~~~~~~lh 269 (486)
T 1js3_A 195 VERAGLIGGVKLKAIPSDG--KFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN---LLEVGPICHEEDIWLH 269 (486)
T ss_dssp HHHHHHHHTCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHTTCEEE
T ss_pred HHHHHHhCCCceEEeecCC--CCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC---HHHHHHHHHHcCCEEE
Confidence 677778888 999999863 555664442 233 37888899999998854 9999999999999999
Q ss_pred EcccCCccccCC-CCCCc-cccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHhhhh-------
Q 036024 83 FDSAYAAYVTDG-CPRSI-YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNRIIC------- 152 (272)
Q Consensus 83 ~D~~~~~~~~~~-~~~~~-~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~~~~------- 152 (272)
+|++|+.+.... ..... ..+.+ .+ .+..+++|.++.| .++|+++++++.. .+.+......+.....
T Consensus 270 vD~a~g~~~~~~~~~~~~~~g~~~-ad--si~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 345 (486)
T 1js3_A 270 VDAAYAGSAFICPEFRHLLNGVEF-AD--SFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITD 345 (486)
T ss_dssp EECTTGGGGGGSTTTGGGGTTGGG-CS--EEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCC
T ss_pred EehhhHHHHHHCHHHHHHhcCccc-cC--eeEEchhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCC
Confidence 999998755321 12111 11211 12 5567889999854 7899999976541 1111100011110000
Q ss_pred ------hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC--ChHH
Q 036024 153 ------TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR--KSWD 223 (272)
Q Consensus 153 ------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~--~~~~ 223 (272)
........+.+.++...+ +.++++++.++..++++++.+.|++. |+++..+....++.+.+++. ...+
T Consensus 346 ~~~~~~~~~rr~~~~~~~~al~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~ 422 (486)
T 1js3_A 346 YRHWQLPLGRRFRSLKMWFVFRMY---GVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEA 422 (486)
T ss_dssp GGGSSSCSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHH
T ss_pred ccccCCCCCCchhHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecChHHHHHH
Confidence 000112334444444443 34567888999999999999999987 89887643455555666532 2456
Q ss_pred HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 224 VFAEILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
+..+|.++ |+.+.++..+ .+.+++|+++. ++++++++++++|+++
T Consensus 423 l~~~L~~~-g~~~~~~~~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 470 (486)
T 1js3_A 423 LLERINSA-RKIHLVPCRL--RGQFVLRFAICSRKVESGHVRLAWEHIRGL 470 (486)
T ss_dssp HHHHHHHH-TSCBCEEEEE--TTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCEEEEEEEE--CCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 77777766 6543332223 23678999963 4789999999998865
No 204
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.79 E-value=8e-18 Score=149.49 Aligned_cols=243 Identities=12% Similarity=0.077 Sum_probs=151.7
Q ss_pred chHHhccc--c--eeEEeecCCCCCcccCCCCC-----C----Cce--EEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 15 LEDEVGKY--C--NIEYLECGPGNNFFPDLKGT-----S----RTD--IIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 15 ~~~~~~~~--g--~~~~~~~~~~~~~~~dl~~~-----~----~~~--~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
+...++.. | +++.+|.++ ++..|++.+ + .++ ++++++++||||..-+ +++|+++|+++|+
T Consensus 215 ~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~---l~~I~~l~~~~~~ 289 (497)
T 2qma_A 215 VQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD---LDFIADMAVKHDM 289 (497)
T ss_dssp HHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC---HHHHHHHHHHcCC
Confidence 45454444 3 588899864 455554442 1 234 7777899999999866 8999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh--hcc--
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC--TCF-- 155 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-- 155 (272)
++++|++|+.+........ .+.+.....+++.|++|.++.| .++|+++++++...+.+......+..... ...
T Consensus 290 ~l~vD~a~~~~~~~~~~~~--~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 366 (497)
T 2qma_A 290 WMHVDGAYGGALILSSHKS--RLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVD 366 (497)
T ss_dssp EEEEEETTGGGGGGSTTGG--GGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC-----------------
T ss_pred EEEEehhhhHHHHhCcchH--hhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCCchhcCCccccCCCccc
Confidence 9999999997665432111 1222212226778999988755 68999998766521111110000000000 000
Q ss_pred ------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCC------hH
Q 036024 156 ------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRK------SW 222 (272)
Q Consensus 156 ------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~------~~ 222 (272)
.....+.+.++.+.+ +.+.++++.++..++++++.+.|+++ ++++..+..+.++++.+.+.. ..
T Consensus 367 ~~~~~~r~~~al~~~~~l~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~ 443 (497)
T 2qma_A 367 KSIATTKRFDALKVFMTMQNV---GPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNK 443 (497)
T ss_dssp ---CCSCCCTHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHH
T ss_pred cCCCCCCchhHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHH
Confidence 000122233333333 34566888899999999999999987 888865445667777775321 12
Q ss_pred HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHHh
Q 036024 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEAL 271 (272)
Q Consensus 223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~~ 271 (272)
++...+.++ |+.+.++..+ .+.+++|+++ .++++++++++++|+++
T Consensus 444 ~l~~~l~~~-G~~~~~~~~~--~g~~~lRis~~~~~~t~edi~~~~~~l~~~ 492 (497)
T 2qma_A 444 ALRLEALTR-GIAVLGETIV--DGKTALKFTILNPCLTTSDFESLLSKINML 492 (497)
T ss_dssp HHHHHHHHH-TSCBCEEEEE--TTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC-CCEEEEeeEE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 444555555 8887654333 2356899986 46899999999999875
No 205
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.79 E-value=1.5e-18 Score=148.49 Aligned_cols=240 Identities=15% Similarity=0.091 Sum_probs=149.1
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...++..| +++.++.+++ ++.+|++.+ +++++++ |+||||...+ +++|.++|++
T Consensus 77 d~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~ 149 (373)
T 3frk_A 77 DEVIVPSNTFIATALAVSYTGAKPIFVEPDIR-TYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKK 149 (373)
T ss_dssp CEEEEETTSCTHHHHHHHHHSCEEEEECEETT-TTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecccc-ccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHH
Confidence 56666666555 667777888 9999999855 455664442 5677777 6789999876 8899999999
Q ss_pred cCCEEEEcccCCcccc-CCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYVT-DGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|+++|+|++|+.+.. ++. .+... .+ +.+.||| |.+|.+| +.|+++++++.+ .+.+......
T Consensus 150 ~~~~li~D~a~~~g~~~~~~--~~~~~---~d--~~~~S~~~~K~l~~~g-~gg~~~~~~~~~-------~~~~~~~~~~ 214 (373)
T 3frk_A 150 YNLKLIEDAAQAHGSLYKGM--KVGSL---GD--AAGFSFYPAKNLGSLG-DGGAVVTNDKDL-------AEKIKALSNY 214 (373)
T ss_dssp HTCEEEEECTTCTTCEETTE--ETTSS---SS--EEEEECCTTSSSCCSS-SCEEEEESCHHH-------HHHHHHHHBT
T ss_pred cCCEEEEECCcccCCEECCE--ecccc---cc--EEEEeCcCCCccCccc-eeEEEEeCCHHH-------HHHHHHHHhc
Confidence 9999999999985332 221 11111 22 7777877 9887325 378888876542 3333332221
Q ss_pred c------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEE--eecCC
Q 036024 154 C------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVW--AHFPG 218 (272)
Q Consensus 154 ~------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~--i~l~~ 218 (272)
. ....+.+.. +..... .+.+++..++.+++.+++.+.|.++++.+.... .+...| +.+..
T Consensus 215 g~~~~~~~~~~g~~~~~~~~~a--a~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (373)
T 3frk_A 215 GSEKKYHHIYKGFNSRLDELQA--GFLRVK---LKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRS 289 (373)
T ss_dssp TCSBTTBCCSCCCBCCCCHHHH--HHHHHH---HHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEE
T ss_pred CcccCCccccccccCCCCHHHH--HHHHHH---HHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEe
Confidence 1 111222222 222222 133466778888888999999988775443221 121111 22222
Q ss_pred CChHHHHHHHHHhcCeEeeCCCCCCC------------CC---------CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 219 RKSWDVFAEILEKTHITTVPGSGFGP------------GG---------EEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 219 ~~~~~~~~~ll~~~gi~v~~g~~~~~------------~~---------~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
.+..++...|.++ ||.+.++..... .+ .+.+|+++ ..|++|++++++.|+++
T Consensus 290 ~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~ 364 (373)
T 3frk_A 290 EKRDELQKYLNNN-GIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAW 364 (373)
T ss_dssp SSHHHHHHHHHHT-TBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHC-CCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 2455666665555 999987652110 00 16799997 45999999999999875
No 206
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.78 E-value=2.8e-17 Score=140.35 Aligned_cols=237 Identities=16% Similarity=0.092 Sum_probs=152.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...+...| +++.++++++ .+.+|++.+ +++++|+ |+||||...+ +++|.++|++
T Consensus 76 d~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~ 148 (367)
T 3nyt_A 76 DEVITPGFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASK 148 (367)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHH
Confidence 56677666655 777778888 9999999876 355554432 5677766 7889998766 8999999999
Q ss_pred cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
+|+++|+|++|.... +.+. .+..+. .+++.|| +|.+|.+|. .|+++.+++.+ .+.+......
T Consensus 149 ~~~~li~D~a~~~g~~~~~~--~~~~~~-----di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l-------~~~~~~~~~~ 213 (367)
T 3nyt_A 149 YGIPVIEDAAQSFGASYKGK--RSCNLS-----TVACTSFFPSAPLGCYGD-GGAIFTNDDEL-------ATAIRQIARH 213 (367)
T ss_dssp TTCCBEEECTTTTTCEETTE--ETTSSS-----SEEEEECCTTSSSCCSSC-CEEEEESCHHH-------HHHHHHHTBT
T ss_pred cCCEEEEECccccCCeECCe--eccCCC-----CEEEEECCCCCcCCCcCc-eeEEEeCCHHH-------HHHHHHHHhc
Confidence 999999999998532 2221 111121 2778886 899985476 88988865542 3444433221
Q ss_pred ------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc-----eEEEeec
Q 036024 154 ------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA-----PYVWAHF 216 (272)
Q Consensus 154 ------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-----~~~~i~l 216 (272)
.....+.+...++...+. .+++..++.+++.+++++.|+++++.+.....+ ..+.+.+
T Consensus 214 g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-----~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (367)
T 3nyt_A 214 GQDRRYHHIRVGVNSRLDTLQAAILLPKLE-----IFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRM 288 (367)
T ss_dssp TEEETTEECSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEEC
T ss_pred CCCcCceeeccCcCCCccHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEe
Confidence 123344444444443332 235566777888899999999887655432211 2234444
Q ss_pred CCCChHHHHHHHHHhcCeEeeCCCCCC-------C-C----------CCCeEEEEcc--CCHHHHHHHHHHHHH
Q 036024 217 PGRKSWDVFAEILEKTHITTVPGSGFG-------P-G----------GEEYIRISGF--GHRESILEASRRLEA 270 (272)
Q Consensus 217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~-------~-~----------~~~~~R~s~~--~~~~~i~~~l~~l~~ 270 (272)
+ +..++...|.++ ||.+.++.... . . ....+|+++. .+++|+++.++.|++
T Consensus 289 ~--~~~~l~~~L~~~-GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 289 D--NRESVQASLKAA-GVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp S--SHHHHHHHHHHH-TCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred C--CHHHHHHHHHHC-CCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 4 455556655555 99998764311 0 0 0346899873 489999999999875
No 207
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.77 E-value=1.5e-17 Score=143.62 Aligned_cols=228 Identities=14% Similarity=0.091 Sum_probs=142.4
Q ss_pred cccccccCccc-chHH-----hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDE-----VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~-----~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. .... +...| +++.++.+.-..+.-.+ .+++++|++.+|+||||.+++ +++|+++|++
T Consensus 106 d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~ 180 (400)
T 3nmy_A 106 SHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAI--RADTKMVWIETPTNPMLKLVD---IAAIAVIARK 180 (400)
T ss_dssp CEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHh--ccCCCEEEEECCCCCCCeeec---HHHHHHHHHH
Confidence 56666666554 3333 33457 88888875211111112 268899999999999999997 9999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeE--EEecccccccCCcchHHHHHhhhhhc
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGW--TVVPEELLFSSGFPVINDFNRIICTC 154 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
+|+++|+|++|....... ++ .+ +..+++.|+||.+|.+|.++|+ ++..++.+ .+.+.......
T Consensus 181 ~g~~livDe~~~~~~~~~---~~-~~----g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~-------~~~l~~~~~~~ 245 (400)
T 3nmy_A 181 HGLLTVVDNTFASPMLQR---PL-SL----GADLVVHSATKYLNGHSDMVGGIAVVGDNAEL-------AEQMAFLQNSI 245 (400)
T ss_dssp TTCEEEEECTTTHHHHCC---GG-GG----TCSEEEEETTTTTTCSSSCCCEEEEECSCHHH-------HHHHHHHHHHH
T ss_pred cCCEEEEECCCcccccCC---hh-hc----CCcEEEecCccccCCCCCcceeEEEEeCCHHH-------HHHHHHHHHhc
Confidence 999999999998533221 11 12 2238999999999877777765 44444331 45555555444
Q ss_pred cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC----------------CCceEEEeec
Q 036024 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG----------------INAPYVWAHF 216 (272)
Q Consensus 155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~i~l 216 (272)
....++....++.+.++ .+..+.++..++++.+.+.|++. .+. +..| ..|.++++.+
T Consensus 246 g~~~~~~~a~~~l~~l~-----~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l 320 (400)
T 3nmy_A 246 GGVQGPFDSFLALRGLK-----TLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVL 320 (400)
T ss_dssp CCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred CCCCCHHHHHHHHHhHh-----HHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEe
Confidence 44456555554444443 23556677889999999999876 333 3222 2367899999
Q ss_pred CCC-ChHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccC
Q 036024 217 PGR-KSWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFG 256 (272)
Q Consensus 217 ~~~-~~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~ 256 (272)
++. .....+...++..++.+..|..++. ..++.+|+|+..
T Consensus 321 ~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl 382 (400)
T 3nmy_A 321 KGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGI 382 (400)
T ss_dssp TTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS
T ss_pred CCcHHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc
Confidence 741 1122222233444555555544320 125789999865
No 208
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.76 E-value=1.6e-17 Score=143.36 Aligned_cols=236 Identities=16% Similarity=0.115 Sum_probs=148.7
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C---CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S---RTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+. +...+...| +++.++++. ++.+|++.+ + +++++++++ |||...+ +++|.++
T Consensus 73 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l 144 (394)
T 1o69_A 73 DIVLASSFTFIASVAPICYLKAKPVFIDCDE--TYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEI 144 (394)
T ss_dssp CEEEEESSSCGGGTHHHHHTTCEEEEECBCT--TSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEEeCC--CCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHH
Confidence 56777766555 777778888 999999973 455554331 2 689999985 8997655 9999999
Q ss_pred HHHcCCEEEEcccCC-ccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEec-ccccccCCcchHHHHHh
Q 036024 74 ARNNGSIIIFDSAYA-AYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNR 149 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~ 149 (272)
|+++|+++|+|++|. ++.+.+.. ...+ .+ +.+.|+ +|.+ +|.|+||++++ +++ .+.+..
T Consensus 145 ~~~~~~~li~Dea~~~g~~~~~~~--~~~~---~~--~~~~s~s~~K~l--~~~~~G~~~~~~~~l--------~~~l~~ 207 (394)
T 1o69_A 145 CKENDIVLIEDAAEALGSFYKNKA--LGTF---GE--FGVYSYNGNKII--TTSGGGMLIGKNKEK--------IEKARF 207 (394)
T ss_dssp HHHTTCEEEEECTTCTTCEETTEE--TTSS---SS--EEEEECCTTSSS--CCSSCEEEEESCHHH--------HHHHHH
T ss_pred HHHcCCEEEEECcCcccceeCCcc--cccc---cC--cEEEEEeCCccC--CCCCceEEEECCHHH--------HHHHHH
Confidence 999999999999998 44443321 1111 12 445555 5655 45689999996 455 444443
Q ss_pred hhhhccCC--------------cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----Cce-
Q 036024 150 IICTCFNG--------------ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAP- 210 (272)
Q Consensus 150 ~~~~~~~~--------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~- 210 (272)
........ ++.+...++... .+++++..++++++++++.+.|.++ +++.++. .++
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-----l~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~ 281 (394)
T 1o69_A 208 YSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQ-----MEVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRW 281 (394)
T ss_dssp HTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHH-----HTTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCS
T ss_pred HHHhccccCccccccccCcccCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeE
Confidence 32211100 122222222111 1235667889999999999999987 6665542 122
Q ss_pred EEEeecCCC----------------------ChHHHHHHHHHhcCeEeeCCCCCC---CCCC---------------CeE
Q 036024 211 YVWAHFPGR----------------------KSWDVFAEILEKTHITTVPGSGFG---PGGE---------------EYI 250 (272)
Q Consensus 211 ~~~i~l~~~----------------------~~~~~~~~ll~~~gi~v~~g~~~~---~~~~---------------~~~ 250 (272)
++++.++.. +..++...|. ++||.++++..+. +.-. ..+
T Consensus 282 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 360 (394)
T 1o69_A 282 LSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLK-NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGI 360 (394)
T ss_dssp SEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHH-HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEE
T ss_pred EEEEEecchhhccccccccccccccccccccCHHHHHHHHH-HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeE
Confidence 466777632 3445555554 5599999985431 1000 234
Q ss_pred EEEc--cCCHHHHHHHHHHHHHh
Q 036024 251 RISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 251 R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
|+.. ..+++|++++++.|+++
T Consensus 361 ~~~~~~~~t~edi~~~~~~l~~~ 383 (394)
T 1o69_A 361 CLPSGTAMSKDDVYEISKLILKS 383 (394)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHH
T ss_pred EccCCCCCCHHHHHHHHHHHHHH
Confidence 4442 46899999999999875
No 209
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.76 E-value=2.5e-17 Score=146.52 Aligned_cols=244 Identities=9% Similarity=0.002 Sum_probs=152.6
Q ss_pred chHHhcccc----eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 15 LEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 15 ~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
+...++..| +++.+|.++ ++..|++.+ + ++++|++++|+||||.+.+ +++|+++|+++|+
T Consensus 202 ~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g~ 276 (504)
T 2okj_A 202 IKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNL 276 (504)
T ss_dssp HHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCC
Confidence 555555443 578888864 455553331 2 5789999999999999866 8999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHHhh--------
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFNRI-------- 150 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~-------- 150 (272)
++++|++|+.+........ ..+.+....-++..+++|.++.| .++|+++++++ .+..........+...
T Consensus 277 ~lhvD~a~~~~~~~~~~~~-~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (504)
T 2okj_A 277 WLHVDAAWGGGLLMSRKHR-HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSY 354 (504)
T ss_dssp EEEEEETTGGGGGGCTTTG-GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGG
T ss_pred EEEEehhhhhHHHhCHhhH-hhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcC
Confidence 9999999987665321110 11221111127778999999845 68999999874 4210000000000000
Q ss_pred --hh---hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec---CCCceEEEeecCCC--
Q 036024 151 --IC---TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG---GINAPYVWAHFPGR-- 219 (272)
Q Consensus 151 --~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~~~~~~i~l~~~-- 219 (272)
.. ........+.+.++.+.+. .+.++++.++..++++++.+.|++. |+++.. +..+.+++...+..
T Consensus 355 ~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~ 431 (504)
T 2okj_A 355 DTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLR 431 (504)
T ss_dssp CCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGS
T ss_pred CcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcccc
Confidence 00 0000113455555555553 3556888899999999999999987 888875 55566655444421
Q ss_pred --------------ChHHHHHHHHHhcCe-EeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 220 --------------KSWDVFAEILEKTHI-TTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 220 --------------~~~~~~~~ll~~~gi-~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
...++...|.++ |+ .+.++ .+. +..+++|+++. ++++++++++++|+++
T Consensus 432 ~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~-~~~-~~~~~lRis~~~~~~t~edi~~~~~~l~~~ 498 (504)
T 2okj_A 432 GVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQ-PQG-DKANFFRMVISNPAATQSDIDFLIEEIERL 498 (504)
T ss_dssp SCCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEEE-EET-TEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHhC-CcEEEEee-EEC-CceEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 024566677766 75 44322 221 11368999985 5899999999999875
No 210
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.76 E-value=2.9e-17 Score=140.02 Aligned_cols=240 Identities=12% Similarity=0.091 Sum_probs=164.2
Q ss_pred ccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024 7 VIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 7 ~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v 81 (272)
++.+.+.. +...+++.| .++.++.+++.+..++ ++. .++++++.+++.+|.||.+.|. +|+++++++
T Consensus 109 ~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi--------i~~~~~~~~ 180 (377)
T 3e77_A 109 VVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF--------IPDVKGAVL 180 (377)
T ss_dssp CCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS--------CCCCTTCCE
T ss_pred EECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh--------hhccCCCEE
Confidence 34444444 556778888 7777787655455454 222 3789999999999999999884 367889999
Q ss_pred EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc---chHHHHHhh--hhhccC
Q 036024 82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF---PVINDFNRI--ICTCFN 156 (272)
Q Consensus 82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~ 156 (272)
++|.+.+. +..+..+..++ ++..|..|.+|.+| +|+++.+++.+....+ ...+ +... ......
T Consensus 181 ~vD~~q~~---g~~~id~~~~~------~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~-~~~~~~~~~~~~ 248 (377)
T 3e77_A 181 VCDMSSNF---LSKPVDVSKFG------VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLE-YKVQAGNSSLYN 248 (377)
T ss_dssp EEECTTTT---TSSCCCGGGCS------EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGC-HHHHHTTTTCSS
T ss_pred EEEccccc---CCCCCchhhcC------EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhh-HHHHhhcCCCCC
Confidence 99999975 22233444432 46788899999888 7899988877543221 1111 1111 122345
Q ss_pred CcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCCCCh-----HHHH
Q 036024 157 GASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPGRKS-----WDVF 225 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~~~~-----~~~~ 225 (272)
+++.....++.++++..... .++++.++.++..+++++.|+++ |+.+.+. ..+..+.+.+++.++ ..+.
T Consensus 249 Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l 328 (377)
T 3e77_A 249 TPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFL 328 (377)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHH
Confidence 67777777777777643334 57899999999999999999998 8875431 224567788886433 2344
Q ss_pred HHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 226 AEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
..+. ++||.+.+|... .+.+|+|+ ++|++|++.+++.|+++
T Consensus 329 ~~l~-~~Gi~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~ 371 (377)
T 3e77_A 329 DKAL-ELNMLSLKGHRS----VGGIRASLYNAVTIEDVQKLAAFMKKF 371 (377)
T ss_dssp HHHH-HTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHH-HCCcEEeCCCCc----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4444 569999887632 35699997 45899999999999876
No 211
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.76 E-value=1.2e-17 Score=147.23 Aligned_cols=198 Identities=13% Similarity=0.052 Sum_probs=134.8
Q ss_pred CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC--CCceEEEecCccccCC
Q 036024 45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA--REVAIEISSFSKFSGF 121 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~ 121 (272)
++++|++...+|+||. ..+++.+++|.++|++||+++|+||+|.++...+.......+... +| +.||||.+ +
T Consensus 258 ~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~D----i~t~sK~~-l 332 (472)
T 1ohv_A 258 TVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPAD----VMTFSKKM-M 332 (472)
T ss_dssp CEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCS----EEEECGGG-S
T ss_pred CEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCC----EEEEcccc-c
Confidence 6788877777888996 567999999999999999999999999876554432233332211 22 34899995 3
Q ss_pred CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024 122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-- 199 (272)
Q Consensus 122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 199 (272)
.| ||++ ++++ . .+.......+.+.+++++.++.+.++.... +...++++++.+++++.|+++
T Consensus 333 ~G---G~~~-~~~~-~--------~~~~~~~~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~ 396 (472)
T 1ohv_A 333 TG---GFFH-KEEF-R--------PNAPYRIFNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQA 396 (472)
T ss_dssp SE---EEEE-CGGG-S--------CSSSSSSCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cC---CccC-chhh-c--------ccccccccCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHh
Confidence 34 7766 4443 1 112222334445788888888877763221 345678888888888888764
Q ss_pred C----CeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024 200 G----IKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL 271 (272)
Q Consensus 200 g----~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~ 271 (272)
+ +....+ .|.+++++++. ....++...|+++ ||.+.|+. .+++|++ +..+++++++++++|+++
T Consensus 397 ~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~g------~~~iRi~~~~~~t~e~i~~~~~~l~~~ 467 (472)
T 1ohv_A 397 RYPQFISRVRG-RGTFCSFDTPDESIRNKLISIARNK-GVMLGGCG------DKSIRFRPTLVFRDHHAHLFLNIFSDI 467 (472)
T ss_dssp HCTTTCEEEEE-ETTEEEEECSSHHHHHHHHHHHHHT-TEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred hCCCcEEeecC-CceEEEEEeCChhHHHHHHHHHHHC-CeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 1 332343 36677778763 1245677777765 99998852 5789996 466999999999999875
No 212
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.62 E-value=5.1e-20 Score=161.28 Aligned_cols=202 Identities=14% Similarity=0.099 Sum_probs=139.1
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++++|++...+|+||.+. +++.+++|.++|+++|+++|+||+|. +.. +......... ....+.||||.+| +
T Consensus 232 ~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~~~a~~~~g----v~pDi~t~sK~lg-~ 304 (465)
T 2yky_A 232 HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SGGGAQEMLG----ISADLTTLGKYIG-G 304 (465)
Confidence 4677777765566799654 57889999999999999999999999 632 2111111111 1233458999999 6
Q ss_pred ccceeEEEecccccccCCcchHHHHHh-----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFNR-----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 197 (272)
|+|+||+++++++ ++.+.. .....+++.+++++.|+.+.++.... +...++++++.+++++.|+
T Consensus 305 G~piG~v~~~~~i--------~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~ 373 (465)
T 2yky_A 305 GMSFGAFGGRRDL--------MERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLN 373 (465)
Confidence 9999999999888 344433 23344556788888888888863322 3466777777888888777
Q ss_pred hC----CCeEecCCCceEEEeecCC-C-------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHH
Q 036024 198 SL----GIKVYGGINAPYVWAHFPG-R-------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRE 259 (272)
Q Consensus 198 ~~----g~~~~~~~~~~~~~i~l~~-~-------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~ 259 (272)
++ ++....+..|.++|+.+.. . ....++..++++ ||.+.|+. |. . +++..+++
T Consensus 374 ~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~-GV~v~p~~-~~----~---~s~~~t~e 444 (465)
T 2yky_A 374 RIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRK-GIYLAPRG-MY----A---LSLEIADA 444 (465)
Confidence 65 3322233467888887753 1 134566677765 99998875 21 1 67777999
Q ss_pred HHHHHHHHHHHhC
Q 036024 260 SILEASRRLEALF 272 (272)
Q Consensus 260 ~i~~~l~~l~~~l 272 (272)
|+++++++|++++
T Consensus 445 did~~l~~l~~~l 457 (465)
T 2yky_A 445 GRDAFAEALADFI 457 (465)
Confidence 9999999988764
No 213
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.74 E-value=1.5e-17 Score=144.32 Aligned_cols=181 Identities=10% Similarity=0.076 Sum_probs=121.3
Q ss_pred HHhcccc-eeEEeecCCCCCcccC-CCC--C--CCceEEEEec----CCCccccCCCHHHHHHHHHHHHH--cCCEEEEc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--T--SRTDIIFFCS----PNNPTGHAATQNQLEQLVEFARN--NGSIIIFD 84 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~--~~~~~i~~~~----p~nptG~~~~~~~l~~l~~~~~~--~~~~vi~D 84 (272)
..++..| +++.+++++++...+| +++ . +++|+|++++ |+||||.+ .++++|+++|++ +|+++++|
T Consensus 142 ~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~~~~~g~~livD 218 (427)
T 3i16_A 142 GSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVKNIRKDIICFVD 218 (427)
T ss_dssp CCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHHHhCCCCEEEEE
Confidence 3456678 8999998765333333 222 1 6899999998 89999876 779999999999 99999999
Q ss_pred ccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccCCcc-hHH
Q 036024 85 SAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS-NIA 162 (272)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 162 (272)
++|..+.+...+. ... ..++++|+||.+|.+| .+.||+++++++ ++.+.........+.. .+.
T Consensus 219 ~a~~~~~~~~~p~---~~g----aDiv~~S~sK~lgg~g~~~gG~i~~~~~l--------i~~l~~~~~~~~~g~~~~~~ 283 (427)
T 3i16_A 219 NCYGEFMDTKEPT---DVG----ADLIAGSLIKNIGGGIAPTGGYLAGTKDC--------IEKTSYRLTVPGIGGECGST 283 (427)
T ss_dssp CTTTTTSSSSCGG---GGT----CSEEEEETTSGGGTTTCCSCEEEEECHHH--------HHHHHHHHSCTTTGGGCCCC
T ss_pred CCCccccccCCcc---ccC----CeEEEecCcccCCCCCCceEEEEEECHHH--------HHHHHHhcccCccCccCCcc
Confidence 9998765332221 121 2389999999998544 567999998877 5566553322111110 000
Q ss_pred HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-----EEEeecCC
Q 036024 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-----YVWAHFPG 218 (272)
Q Consensus 163 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-----~~~i~l~~ 218 (272)
..++..++ .+......+.++..+++..+.+.|+++|+++++. .+. ++.+.+.+
T Consensus 284 ~~~a~~~l--~gl~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~-~~~~~~~~i~~i~l~~ 341 (427)
T 3i16_A 284 FGVVRSMY--QGLFLAPHISMEALKGAILCSRIMELAGFEVMPK-YDEKRSDIIQSIKFND 341 (427)
T ss_dssp TTCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSCEEEECSS
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-CCCCCccEEEEEEECC
Confidence 11011111 2223446788999999999999999999988553 443 77788863
No 214
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.74 E-value=2.6e-17 Score=145.23 Aligned_cols=242 Identities=12% Similarity=-0.021 Sum_probs=154.3
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
+...++..| +++.+|.++++ .|++.+ + .+.+++++.++|+||.+-+ +++|+++|++||++++
T Consensus 195 ~~~~~~~~g~~~~~v~~d~~~---~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~---l~~I~~la~~~~~~lh 268 (475)
T 3k40_A 195 VERAGLLGGVKLRSVQSENHR---MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY---LDECGPVGNKHNLWIH 268 (475)
T ss_dssp HHHHHHHHTCEEEEECCBTTB---CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHcCCceEEEECCCCC---cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC---HHHHHHHHHHhCCeEE
Confidence 556666678 99999997553 553331 1 1567888899999999855 9999999999999999
Q ss_pred EcccCCccccC-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHhh--------hh
Q 036024 83 FDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNRI--------IC 152 (272)
Q Consensus 83 ~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~~--------~~ 152 (272)
+|++|+..... +..... +.+......+..+++|.++.| ..+|+++..+... ...+......+... ..
T Consensus 269 vD~A~~~~~~~~~~~~~~--~~gi~~~Ds~~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 345 (475)
T 3k40_A 269 VDAAYAGSAFICPEYRHL--MKGIESADSFNFNPHKWMLVN-FDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRH 345 (475)
T ss_dssp EECTTGGGGGGSGGGGGG--GTTGGGCSEEEECHHHHSSCC-SSCEEEEESSGGGC------------------------
T ss_pred EeHHhHHHHHhCHhhHHH--hcCcccCCEEEECchhccCCC-CceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCccc
Confidence 99999864332 111111 111111126778999988744 4578888776542 11111000111000 00
Q ss_pred hcc-CC--cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC--ChHHHHH
Q 036024 153 TCF-NG--ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR--KSWDVFA 226 (272)
Q Consensus 153 ~~~-~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~--~~~~~~~ 226 (272)
.+. .+ ...+.+.++.+.+ +.+.++++.++..++++++.+.|+++ |+++..+....++++.+++. ...++..
T Consensus 346 ~~~~~sr~~~~l~l~~al~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l~~ 422 (475)
T 3k40_A 346 WQIPLGRRFRALKLWFVLRLY---GVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEALLK 422 (475)
T ss_dssp ---CCCGGGTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHHHH
T ss_pred ccccCCCcccHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHHHH
Confidence 000 00 1123333333333 34566889999999999999999998 99998766777888888642 3567778
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
+|.++.++.+.|+.. .+..++|+++. ++++++++++++|+++
T Consensus 423 ~L~~~g~~~~~~~~~---~g~~~lR~~~~~~~tt~~di~~~~~~i~~~ 467 (475)
T 3k40_A 423 RINGRGHIHLVPAKI---KDVYFLRMAICSRFTQSEDMEYSWKEVSAA 467 (475)
T ss_dssp HHHHHTSCBCEEEEE---TTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHhCCcEEEEeeEE---CCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 888875556655432 23678999964 3789999999999875
No 215
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.74 E-value=5.4e-16 Score=135.50 Aligned_cols=245 Identities=17% Similarity=0.052 Sum_probs=152.2
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEec-CCCccccCCCHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCS-PNNPTGHAATQNQLEQLVEFAR 75 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~-p~nptG~~~~~~~l~~l~~~~~ 75 (272)
|.|++..+.+. +...+...| +++.++++++ ++.+|++. .++++++++++ ++|| . ++++|.++|+
T Consensus 111 d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~g~~----~---~~~~i~~l~~ 182 (437)
T 3bb8_A 111 DEVITVAAGFPTTVNPTIQNGLIPVFVDVDIP-TYNVNASLIEAAVSDKTKAIMIAHTLGNL----F---DLAEVRRVAD 182 (437)
T ss_dssp CEEEECSSSCHHHHHHHHHTTCEEEECCEETT-TTEECGGGHHHHCCTTEEEEEEECGGGCC----C---CHHHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEeccCc-cCCcCHHHHHHhcCCCCeEEEEeCCCCCh----h---cHHHHHHHHH
Confidence 56777666555 777777788 9999998764 45566554 26789999974 5555 3 4899999999
Q ss_pred HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh---
Q 036024 76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC--- 152 (272)
Q Consensus 76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--- 152 (272)
++|+++|+|++|....... .. .+....+ +++.||+|..+++|.+.|+++++++.+... ...+.....
T Consensus 183 ~~~~~li~D~a~~~g~~~~-~~---~~~~~~d--~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~----~~~~~~~~~~~~ 252 (437)
T 3bb8_A 183 KYNLWLIEDCCDALGSTYD-GK---MAGTFGD--IGTVSFYPAKHITMGEGGAVFTQSAELKSI----IESFRDWGRDCY 252 (437)
T ss_dssp HHTCEEEEECTTCTTCEET-TE---ETTSSSS--EEEEECSTTSSSCCSSCEEEEESCHHHHHH----HHHHHBTTBCC-
T ss_pred HcCCEEEEECccccCceEC-Ce---ecccccC--EEEEECcCCcCCCCCCeEEEEeCCHHHHHH----HHHHHHhCcccc
Confidence 9999999999998432211 11 1211122 677889888888888999999987653211 011110000
Q ss_pred ---------------------------------hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024 153 ---------------------------------TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199 (272)
Q Consensus 153 ---------------------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 199 (272)
......+.+...++.+.+. .+++..++.+++.+++.+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~-----~~~~~~~~~~~~~~~l~~~L~~~ 327 (437)
T 3bb8_A 253 CAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLE-----RIEEFVEKRKANFKYLKDALQSC 327 (437)
T ss_dssp ---------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHGGGG
T ss_pred cccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhcc
Confidence 0000123344443444432 22344455578889999999987
Q ss_pred -CCeEecCCC-----c--eEE-EeecC-CCChHHHHHHHHHhcCeEeeCCCCCC----CC----C--------------C
Q 036024 200 -GIKVYGGIN-----A--PYV-WAHFP-GRKSWDVFAEILEKTHITTVPGSGFG----PG----G--------------E 247 (272)
Q Consensus 200 -g~~~~~~~~-----~--~~~-~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~----~~----~--------------~ 247 (272)
|+.+.+... + .|+ .+..+ +.+..++...|.++ ||.+.++.... +. + .
T Consensus 328 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 406 (437)
T 3bb8_A 328 ADFIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEA-KVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMN 406 (437)
T ss_dssp TTTEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHT-TBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHH
T ss_pred CCccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHC-CCceeccCCcccccCchhhccCccccCCCcHHHHHhc
Confidence 766553210 2 233 24443 44566666666655 99998876421 10 0 1
Q ss_pred CeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024 248 EYIRISG--FGHRESILEASRRLEALF 272 (272)
Q Consensus 248 ~~~R~s~--~~~~~~i~~~l~~l~~~l 272 (272)
+.+|+++ ..|++|++++++.|++++
T Consensus 407 ~~lrl~~~~~~t~~di~~i~~~l~~~~ 433 (437)
T 3bb8_A 407 QTFWIGIYPGLTHDHLDYVVSKFEEFF 433 (437)
T ss_dssp HEEEECCSTTCCHHHHHHHHHHHHHHT
T ss_pred CEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 2489996 348999999999998764
No 216
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.74 E-value=9.5e-17 Score=139.65 Aligned_cols=244 Identities=14% Similarity=0.073 Sum_probs=145.3
Q ss_pred cccccccCccc-chHH----hcccc-eeEEe-ecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDE----VGKYC-NIEYL-ECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~-~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+. .... ++..| +++.+ +.+. ++ +++ .+++++|++++|+||||.+++ +++|.++
T Consensus 98 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d-----~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~ 169 (421)
T 2ctz_A 98 DNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREER-----PEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQA 169 (421)
T ss_dssp CEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCC-----HHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCC-----HHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHH
Confidence 55666655444 3333 35677 88888 6541 11 221 258899999999999999998 8999999
Q ss_pred HHHcCCEEEEcccC-CccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-c--ccccCCcchHH----
Q 036024 74 ARNNGSIIIFDSAY-AAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-E--LLFSSGFPVIN---- 145 (272)
Q Consensus 74 ~~~~~~~vi~D~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~--~~~~~~~~~~~---- 145 (272)
|+++|+++|+|++| ... +.+. ++ ... ..+++.|++|.+|.+|.++|++++.+ + +..+....+..
T Consensus 170 a~~~g~~livD~~~~~~g-~~~~--~~-~~~----~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g 241 (421)
T 2ctz_A 170 AREKGVALIVDNTFGMGG-YLLR--PL-AWG----AALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPG 241 (421)
T ss_dssp HHHHTCEEEEECGGGGGG-TSCC--GG-GGT----CSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGG
T ss_pred HHHcCCEEEEECCccccc-ccCC--cc-ccC----CeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccch
Confidence 99999999999999 532 2221 22 221 23889999999998899999988852 1 10000000100
Q ss_pred -----------------HHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-
Q 036024 146 -----------------DFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG- 205 (272)
Q Consensus 146 -----------------~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~- 205 (272)
..+.. ........+.....++...++ .+..+.++..++.+++.+.|+++ ++....
T Consensus 242 ~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~-----~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~ 316 (421)
T 2ctz_A 242 YHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGME-----TLSLRAERHVENTLHLAHWLLEQPQVAWVNY 316 (421)
T ss_dssp GTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred hhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcc-----hHHHHHHHHHHhHHHHHHHHHhCCCeeEEEC
Confidence 00000 011111233333333333332 23445666678999999999987 666542
Q ss_pred C-----------------CCceEEEeecCCCChHHHHHHHHHh---cCeEeeCCCCCCC---------------------
Q 036024 206 G-----------------INAPYVWAHFPGRKSWDVFAEILEK---THITTVPGSGFGP--------------------- 244 (272)
Q Consensus 206 ~-----------------~~~~~~~i~l~~~~~~~~~~~ll~~---~gi~v~~g~~~~~--------------------- 244 (272)
| ..+.++.+.+++. .+....++++ .++.+..|..+..
T Consensus 317 p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~--~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g 394 (421)
T 2ctz_A 317 PGLPHHPHHDRAQKYFKGKPGAVLTFGLKGG--YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAG 394 (421)
T ss_dssp TTSTTCTTHHHHHHHHTTCCCSEEEEEETTH--HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHT
T ss_pred CCCCCCCCHHHHHHhccCCCceEEEEEeCCC--HHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcC
Confidence 1 2366788888742 2223344443 3455555532210
Q ss_pred CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024 245 GGEEYIRISGFGHRESILEASRRLEALF 272 (272)
Q Consensus 245 ~~~~~~R~s~~~~~~~i~~~l~~l~~~l 272 (272)
..++.+|+|+.. ++++++++.|+++|
T Consensus 395 ~~~~~vRlS~g~--e~~~~li~~l~~al 420 (421)
T 2ctz_A 395 VSPEMVRLSVGL--EHVEDLKAELKEAL 420 (421)
T ss_dssp CCTTEEEEECCS--SCHHHHHHHHHHHT
T ss_pred CCCCeEEEEeCC--CCHHHHHHHHHHHh
Confidence 114899999853 57777788887765
No 217
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.74 E-value=1.2e-17 Score=144.19 Aligned_cols=177 Identities=16% Similarity=0.139 Sum_probs=119.4
Q ss_pred Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEec----CCCccccCCCHHHHHHHHHHHHH--cCCEEEEcccC
Q 036024 18 EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCS----PNNPTGHAATQNQLEQLVEFARN--NGSIIIFDSAY 87 (272)
Q Consensus 18 ~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~----p~nptG~~~~~~~l~~l~~~~~~--~~~~vi~D~~~ 87 (272)
.++..| +++.+++++++...++ +++ .+++|+|++++ |+||||.+ .++++|+++|++ +|+++++|++|
T Consensus 128 ~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v---~~l~~I~~la~~~~~~~~livD~a~ 204 (409)
T 3jzl_A 128 SLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI---EKIKEMIVFVKNINPEVIVFVDNCY 204 (409)
T ss_dssp CTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH---HHHHHHHHHHHHHCTTCEEEEECTT
T ss_pred HHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc---ccHHHHHHHHHhhCCCCEEEEeCCc
Confidence 456678 8889988755333333 222 26899999998 99999977 679999999999 99999999999
Q ss_pred CccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhh----ccCCcchHH
Q 036024 88 AAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICT----CFNGASNIA 162 (272)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 162 (272)
..+.+...+. ... ..++++|+||.+|.+| .+.||+++++++ ++.+...... ...++....
T Consensus 205 ~~~~~~~~p~---~~g----~Div~~S~sK~lgg~~~~~GG~v~~~~~l--------i~~l~~~~~~~~~g~~~g~~~~~ 269 (409)
T 3jzl_A 205 GEFVEYQEPP---EVG----ADIIAGSLIKNPGGGLAKTGGYIAGKEAL--------VDLCGYRLTTPGIGREAGASLYS 269 (409)
T ss_dssp CTTTSSCCSG---GGT----CSEEEEETTSGGGTTTCSSCEEEEECHHH--------HHHHHHHHSCTTTGGGCCCCTTC
T ss_pred ccccccCCcc---ccC----CeEEEECccccCCccCCceEEEEEeCHHH--------HHHHHHHhccccccccccccHHH
Confidence 8765432221 221 2399999999998544 346999998877 5555543321 111122111
Q ss_pred HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-----EEEeecCC
Q 036024 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-----YVWAHFPG 218 (272)
Q Consensus 163 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-----~~~i~l~~ 218 (272)
..++.+.+ .....++++..+++..+.+.|+++|+++.+. .+. .+.+.+++
T Consensus 270 ~~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~g~~v~p~-~~~~~~~~i~~i~l~~ 324 (409)
T 3jzl_A 270 LLEMYQGF-----FLAPHVTAQAIKGARFTAAMLAEFGVEADPV-WDAPRTDLIQSVSFHN 324 (409)
T ss_dssp HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSCCEEECSC
T ss_pred HHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CCCCCccEEEEEEeCC
Confidence 22222222 3346678889999999999999999988553 333 66777763
No 218
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.73 E-value=1.3e-17 Score=145.19 Aligned_cols=205 Identities=16% Similarity=0.157 Sum_probs=133.5
Q ss_pred ccccccc--CcccchHH----------hcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEe-cCCCccccCCCH
Q 036024 4 DSSVIVG--QAGDLEDE----------VGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFC-SPNNPTGHAATQ 64 (272)
Q Consensus 4 d~~~~~~--~~~~~~~~----------~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~-~p~nptG~~~~~ 64 (272)
|.|++.. +++.+... ++..| +++.++.+++ +.+|++. .+++++|+++ +||||+|...+.
T Consensus 108 d~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~--~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~ 185 (431)
T 3ht4_A 108 DELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEG--GLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTI 185 (431)
T ss_dssp CEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTT--SSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH
T ss_pred CEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCC--CCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCH
Confidence 5566664 44445533 34578 9999998765 4455333 2689999999 699999999999
Q ss_pred HHHHHHHHHHHH--cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCc
Q 036024 65 NQLEQLVEFARN--NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGF 141 (272)
Q Consensus 65 ~~l~~l~~~~~~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~ 141 (272)
+++++|+++|++ +|+++++|++|..+.+...+. .+. ..++++|+||.+|. .+...||+++++++
T Consensus 186 ~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g----~Di~~~S~sK~lgg~~~~~GG~v~~~~~l------ 252 (431)
T 3ht4_A 186 SQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVG----ADLMAGSLIKNPGGGIVKTGGYIVGKEQY------ 252 (431)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTT----CSEEEEETTSGGGTTTCSSCEEEEECHHH------
T ss_pred HHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccC----CeEEEcCccccCCCCCCCceEEEEecHHH------
Confidence 999999999999 999999999999876543322 221 12899999999752 12334999998877
Q ss_pred chHHHHHhhhhhccC----CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC----ceEEE
Q 036024 142 PVINDFNRIICTCFN----GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN----APYVW 213 (272)
Q Consensus 142 ~~~~~~~~~~~~~~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~ 213 (272)
++.+......... +++.....++.+.+ .....+.++..++++.+.+.|+++|+++.+... +.++.
T Consensus 253 --i~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~ 325 (431)
T 3ht4_A 253 --VEACAYRLTSPGIGAEAGASLYSLQEMYQGF-----FLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQS 325 (431)
T ss_dssp --HHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCE
T ss_pred --HHHHHHHhccCCcccccCccHHHHHHHHhHh-----hhHHHHHHHHHHHHHHHHHHHHhCcCEecCCCCCCCccEEEE
Confidence 5555543322111 11111112122222 234667788999999999999999988754321 23667
Q ss_pred eecCCCC-hHHHHHHHHH
Q 036024 214 AHFPGRK-SWDVFAEILE 230 (272)
Q Consensus 214 i~l~~~~-~~~~~~~ll~ 230 (272)
+.+++.. ...++..+.+
T Consensus 326 i~l~~~~~~~~~~~~l~~ 343 (431)
T 3ht4_A 326 VQFDDKDRMIAFCQAIQY 343 (431)
T ss_dssp EECCCHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHh
Confidence 7776322 2334444433
No 219
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.73 E-value=6.3e-17 Score=144.05 Aligned_cols=238 Identities=10% Similarity=0.029 Sum_probs=147.9
Q ss_pred chHHhcccc----eeEEeecCCCCCcccCCCCC-----CC------ceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024 15 LEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----SR------TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79 (272)
Q Consensus 15 ~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----~~------~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~ 79 (272)
+...++..| +++.+|.+.+ +..|++.+ ++ ++++++++|+||||.+-+ +++|+++|++||+
T Consensus 205 ~~~~~~~~g~g~~~~~~v~~d~~--~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~---l~~I~~ia~~~~~ 279 (511)
T 3vp6_A 205 IKKAGAALGFGTDNVILIKCNER--GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNL 279 (511)
T ss_dssp HHHHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC---HHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCCCcEEEeecCCC--CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc---HHHHHHHHHHcCC
Confidence 555555555 5788888754 45553331 22 788999999999999955 9999999999999
Q ss_pred EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh----hh----
Q 036024 80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR----II---- 151 (272)
Q Consensus 80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~----~~---- 151 (272)
++++|++|+.......... ..+.+...-.+++.+++|.++.| ..+|++++++... ...... +.
T Consensus 280 ~lhvD~a~~~~~~~~~~~~-~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~-------~~~~~~~~~~yl~~~~ 350 (511)
T 3vp6_A 280 WLHVDAAWGGGLLMSRKHR-HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGI-------LQGCNQMHASYLFQQD 350 (511)
T ss_dssp EEEEEETTGGGGGGCTTTG-GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTH-------HHHHHCCCCTTTCCSS
T ss_pred EEEEEccchhhHhhChhhh-hhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHH-------HHHHhccCCccccCcc
Confidence 9999999987554221110 11111111226778999998744 5688888876541 111100 00
Q ss_pred ----------hhc---cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec---CCCceEEEe
Q 036024 152 ----------CTC---FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG---GINAPYVWA 214 (272)
Q Consensus 152 ----------~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~~~~~~i 214 (272)
..+ ..........++.+. .+.++++++.++..++++++.+.|++. |+++.. +..+.++|-
T Consensus 351 ~~~~~~~~~~~~~~~~~r~~~al~~~~al~~---~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~ 427 (511)
T 3vp6_A 351 KHYDVSYDTGDKAIQCGRHVDIFKFWLMWKA---KGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFW 427 (511)
T ss_dssp CSSCGGGCCGGGSSCSSCCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEE
T ss_pred cccccccCccCCCCCCCCchHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEE
Confidence 000 000122333333333 345677999999999999999999987 899876 333444433
Q ss_pred ecCC-CC---------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 215 HFPG-RK---------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 215 ~l~~-~~---------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
..+. .+ ..++..+|.++ |+.+.. ..+...+.+++|+++. .+.+++++++++|+++
T Consensus 428 ~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-G~~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~ 501 (511)
T 3vp6_A 428 YIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVG-YQPQGDKANFFRMVISNPAATQSDIDFLIEEIERL 501 (511)
T ss_dssp ECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHH-TSCEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred EeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 2231 10 22466677777 755433 1122223457999973 3789999999998764
No 220
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.72 E-value=1.8e-15 Score=138.96 Aligned_cols=254 Identities=12% Similarity=-0.040 Sum_probs=150.5
Q ss_pred cccccccCccc-chHH-hcccc-eeEEeecCCCCCc----ccCCCCC----------CC------c----eEEEEecCCC
Q 036024 4 DSSVIVGQAGD-LEDE-VGKYC-NIEYLECGPGNNF----FPDLKGT----------SR------T----DIIFFCSPNN 56 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~-~~~~g-~~~~~~~~~~~~~----~~dl~~~----------~~------~----~~i~~~~p~n 56 (272)
|.|++..+... +... +...| ++++++...+ .+ .+|++.+ ++ + |++++++| |
T Consensus 214 D~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n 291 (730)
T 1c4k_A 214 DLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-T 291 (730)
T ss_dssp CEEEEETTCCHHHHHHHTTTTCCEEEEECEEEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-C
T ss_pred CEEEEcCCchHHHHHHHHHHCCCEEEEEeCCcc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-C
Confidence 55666655543 4444 56677 8888877533 22 1342222 22 4 89999999 5
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc-ccCCCC---CCcc--ccCCCCCceEEEecCccccCCCccce-eEE
Q 036024 57 PTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY-VTDGCP---RSIY--EIPGAREVAIEISSFSKFSGFTGVRL-GWT 129 (272)
Q Consensus 57 ptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~-~~~~~~---~~~~--~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~ 129 (272)
|+|.+.+ +++|+++|+++++++++|++|... .+.+.. .++. .+.....++++++|+||.++ |.+. |++
T Consensus 292 ~~G~v~d---l~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I 366 (730)
T 1c4k_A 292 YDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQI 366 (730)
T ss_dssp TTSEEEC---HHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEE
T ss_pred CCCeecC---HHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEE
Confidence 8999977 899999999999999999999743 333211 1111 11222346799999999875 3443 566
Q ss_pred EecccccccCCcch-HHHHHhhhh-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--CCCeEec
Q 036024 130 VVPEELLFSSGFPV-INDFNRIIC-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--LGIKVYG 205 (272)
Q Consensus 130 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~ 205 (272)
.++++.+......+ ...+..... ..+.+++.....++..++.....+..++..+++.++.+++++.|++ .|+++..
T Consensus 367 ~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~ 446 (730)
T 1c4k_A 367 HKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFV 446 (730)
T ss_dssp EEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESS
T ss_pred EecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcc
Confidence 56555431100000 122222221 2222344443333333333222223366678899999999999988 4888765
Q ss_pred CCC-------------------------------------c-eE-----EEeecCC------------CChHHHHHHHHH
Q 036024 206 GIN-------------------------------------A-PY-----VWAHFPG------------RKSWDVFAEILE 230 (272)
Q Consensus 206 ~~~-------------------------------------~-~~-----~~i~l~~------------~~~~~~~~~ll~ 230 (272)
+.. + .+ +.+..++ ....++...|.+
T Consensus 447 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e 526 (730)
T 1c4k_A 447 PPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRD 526 (730)
T ss_dssp CSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHH
Confidence 421 1 11 4556542 345566666555
Q ss_pred hcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 231 KTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 231 ~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
+ ||.+... +...+|+++ ..+++++++++++|+++
T Consensus 527 ~-GI~v~~~------~~~~ir~~~s~g~t~e~i~~Ll~aL~~i 562 (730)
T 1c4k_A 527 H-GIIPEKS------DLNSILFLMTPAETPAKMNNLITQLLQL 562 (730)
T ss_dssp T-TCCCSEE------CSSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred C-CcEEEEC------CCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5 9988643 256788885 55899999999988764
No 221
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.71 E-value=7.2e-17 Score=142.73 Aligned_cols=243 Identities=13% Similarity=0.025 Sum_probs=155.2
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
+...++..| +++.+|.++ ++.+|++.+ + .+.+++++.++|+||.+-+ +++|+++|++||++++
T Consensus 201 ~~~~~~~~g~~~~~v~~~~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~---l~~I~~la~~~~~~lh 275 (481)
T 4e1o_A 201 VEKAGLISLVKMKFLPVDD--NFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC---LSELGPICAREGLWLH 275 (481)
T ss_dssp HHHHHHHHTCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEE
T ss_pred HHHHHHhCCCceEEEEcCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC---HHHHHHHHHHcCCeEE
Confidence 555556667 999999864 445553331 1 1667888899999998855 9999999999999999
Q ss_pred EcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHh--------hhh
Q 036024 83 FDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNR--------IIC 152 (272)
Q Consensus 83 ~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~--------~~~ 152 (272)
+|++|+...... ..... ..+......+..+++|.++.| .-+|+++..+... ...+......+.. ...
T Consensus 276 vDaA~g~~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 352 (481)
T 4e1o_A 276 IDAAYAGTAFLCPEFRGF--LKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMH 352 (481)
T ss_dssp EECTTGGGGGGSGGGGGG--GTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGG
T ss_pred eehhhHHHHHhChhhHHH--hcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCccc
Confidence 999998654321 11111 111111126667999998755 3467777765442 1111000000100 000
Q ss_pred h---ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC--ChHHHHH
Q 036024 153 T---CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR--KSWDVFA 226 (272)
Q Consensus 153 ~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~--~~~~~~~ 226 (272)
. .......+.+.++.+.+ +.+.++++.++..++++++.+.|+++ |+++..+....++++.+++. ...++..
T Consensus 353 ~~~~~~r~~~~l~~~~al~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~ 429 (481)
T 4e1o_A 353 WQIPLSRRFRSVKLWFVIRSF---GVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTENVLK 429 (481)
T ss_dssp GSSSSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHHHHHH
T ss_pred ccccCCCCccHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHHHHHH
Confidence 0 00011234444444444 34567888999999999999999998 89998776778888888642 3456777
Q ss_pred HHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 227 EILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
++.++..+.+.|+. ..+..++|+++. ++++++++++++|+++
T Consensus 430 ~L~~~g~~~~~~~~---~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~ 474 (481)
T 4e1o_A 430 EIAKAGRLFLIPAT---IQDKLIIRFTVTSQFTTRDDILRDWNLIRDA 474 (481)
T ss_dssp HHHHHCSSBCEEEE---ETTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHhCCeEEEEeeE---ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 77777335555443 234578999963 3789999999999875
No 222
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.71 E-value=4.8e-17 Score=141.06 Aligned_cols=175 Identities=13% Similarity=0.109 Sum_probs=118.2
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCC-----C--CCceEEEEec----CCCccccCCCHHHHHHHHHHHHH--cCCEEE
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKG-----T--SRTDIIFFCS----PNNPTGHAATQNQLEQLVEFARN--NGSIII 82 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~--~~~~~i~~~~----p~nptG~~~~~~~l~~l~~~~~~--~~~~vi 82 (272)
..++..| +++.++. ++ +.+|++. . +++|+|++++ |+||||.+ .++++|+++|++ +|++++
T Consensus 143 ~~l~~~G~~~~~v~~-~~--~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia~~~~~g~~li 216 (427)
T 3hvy_A 143 GSLREYGVKYKMVDL-KD--GKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSIREVNENVIVF 216 (427)
T ss_dssp CCTGGGTCEEEECCC-BT--TBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHHHHHCSSSEEE
T ss_pred hHHHHcCCEEEEecC-CC--CCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccH---HHHHHHHHHHHHhCCCCEEE
Confidence 3456678 8888888 33 3455332 1 6899999998 89999866 679999999999 899999
Q ss_pred EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccCC---c
Q 036024 83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG---A 158 (272)
Q Consensus 83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 158 (272)
+|++|..+.+...+. ... ..++++|+||.+|..| .+.||+++++++ ++.+.........+ .
T Consensus 217 vD~a~~~~~~~~~p~---~~g----aDiv~~S~sK~lgg~g~~~GG~i~~~~~l--------i~~l~~~~~~~~~g~~~~ 281 (427)
T 3hvy_A 217 VDNCYGEFVEEKEPT---DVG----ADIIAGSLIKNIGGGIATTGGYIAGKEEY--------VTQATFRVTVPGIGGECG 281 (427)
T ss_dssp EECTTCTTTSSSCGG---GGT----CSEEEEETTSGGGTTTCCSCEEEEECHHH--------HHHHHHHHSCTTTGGGCC
T ss_pred EECCccccccCCCCc---ccC----CeEEEECCcccccccccceEEEEEECHHH--------HHHHHHHhhcCCcccccC
Confidence 999998765332221 121 2389999999998433 456999998877 55665533211110 1
Q ss_pred chHH-HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-----EEEeecCC
Q 036024 159 SNIA-QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-----YVWAHFPG 218 (272)
Q Consensus 159 ~~~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-----~~~i~l~~ 218 (272)
+.+. ...+... ......+.++..+++..+.+.|+++|+++.+. .+. ++.+.+.+
T Consensus 282 ~~~~~a~~~~~g-----l~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~-~~~~~~~li~~~~l~~ 341 (427)
T 3hvy_A 282 STFGVMRSLYEG-----LFMAPHVTIEAVKGAVFCARIMELAGFDVLPK-YNDKRTDIIQAIKFND 341 (427)
T ss_dssp CCTTCHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSEEEEECSS
T ss_pred CCHHHHHHHHHh-----HhHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-CCCCCceEEEEEeCCC
Confidence 1111 1212222 23346678889999999999999999988553 333 77778863
No 223
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.70 E-value=6e-16 Score=131.38 Aligned_cols=239 Identities=14% Similarity=0.121 Sum_probs=159.1
Q ss_pred ccccCccc-chHHhcccc-eeEEeecCCCCCc--ccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 7 VIVGQAGD-LEDEVGKYC-NIEYLECGPGNNF--FPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 7 ~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~--~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
++.+.+.. +...+++.| ++..++.++++.+ .++.+-.++++++.+++.+|.||...+. +++ ++++++
T Consensus 98 i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~~l~~~t~lv~~~~~e~~tG~~~~~--------i~~-~~~~~~ 168 (361)
T 3m5u_A 98 ANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRVEFSDNADYAYICSNNTIYGTQYQN--------YPK-TKTPLI 168 (361)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCCCCCTTSSEEEEESEETTTTEECSS--------CCC-CSSCEE
T ss_pred EeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChhhcCCCCCEEEEeCCCCCcceeCCc--------ccc-cCCEEE
Confidence 45555544 555667788 9999999877543 3333212689999999999999998662 233 499999
Q ss_pred EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC----CcchHHHHHhh--hhhccC
Q 036024 83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS----GFPVINDFNRI--ICTCFN 156 (272)
Q Consensus 83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~ 156 (272)
+|.+++.. ..+..+..+ | +++.|.+|.+|.+| +|+++.+++..... .+...+ +... ......
T Consensus 169 vD~~q~~g---~~~id~~~~----d--~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~ 236 (361)
T 3m5u_A 169 VDASSDFF---SRKVDFSNI----A--LFYGGVQKNAGISG--LSCIFIRKDMLERSKNKQIPSMLN-YLTHAENQSLFN 236 (361)
T ss_dssp EECGGGTT---SSCCCCTTE----E--EEEEETTTTSSCTT--CEEEEEEHHHHHHHHTCCCCGGGC-HHHHHHTTTCSS
T ss_pred EEcccccC---CCCCCcccC----C--EEEEechhccCCCc--cEEEEEcHHHHhhhcCCCCCceee-hHHHhhcCCCCC
Confidence 99998752 222233222 2 77889999999788 79999988774221 111111 1111 122335
Q ss_pred CcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-C-eEecC---CCceEEEeecCC-CC-hHHHHHHH
Q 036024 157 GASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-I-KVYGG---INAPYVWAHFPG-RK-SWDVFAEI 228 (272)
Q Consensus 157 ~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~---~~~~~~~i~l~~-~~-~~~~~~~l 228 (272)
+++.....++.++++..... .++++.++.++.++++++.|++++ + ....+ .....+.+.+++ .. +.++. ..
T Consensus 237 Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~-~~ 315 (361)
T 3m5u_A 237 TPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFV-KE 315 (361)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTHHHHHH-HH
T ss_pred CccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchhhhHHHH-HH
Confidence 67777777777776632223 468899999999999999999986 5 55432 124567778775 22 23444 45
Q ss_pred HHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 229 LEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 229 l~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
++++||.+.+|... .+.+|+|+ +++++|++++++.|+++
T Consensus 316 L~~~gI~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~ 356 (361)
T 3m5u_A 316 AEEAGMIGLKGHRI----LGGIRASIYNALNLDQVKTLCEFMKEF 356 (361)
T ss_dssp HHHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHCCCEEecCCCc----cCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 56669999887642 25699997 45899999999999875
No 224
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.69 E-value=6.9e-16 Score=137.60 Aligned_cols=246 Identities=9% Similarity=-0.011 Sum_probs=147.1
Q ss_pred cchHHhcccc----eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024 14 DLEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78 (272)
Q Consensus 14 ~~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 78 (272)
.+...++..| +++.+|.+++ +..|++.+ + ++++|++++|+||||.+.+ +++|+++|+++|
T Consensus 215 s~~~~~~~~g~g~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g 289 (515)
T 2jis_A 215 SIQKGAAFLGLGTDSVRVVKADER--GKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHG 289 (515)
T ss_dssp HHHHHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCcEEEEecCCC--CcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcC
Confidence 3555555444 5788888643 44453331 1 4889999999999999976 899999999999
Q ss_pred CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc--ccccCCcchHHHHHhhhh----
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE--LLFSSGFPVINDFNRIIC---- 152 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~---- 152 (272)
+++++|++|+.+........ ..+.+..+..+++.|++|.++.| .++|+++++++ ++..........+.....
T Consensus 290 ~~l~vD~a~~~~~~~~~~~~-~~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 367 (515)
T 2jis_A 290 LWLHVDAAWGGSVLLSQTHR-HLLDGIQRADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDV 367 (515)
T ss_dssp CEEEEEETTGGGGGGCTTTG-GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHHHHCC---------CCSCG
T ss_pred CeEEEehhhhhHHHhChhhH-hhcCCCccCCEEEECcccccCCC-CCeeEEEEeChHHHHHHHhcCCchhccCCcccccc
Confidence 99999999987665432111 11222212237888999998734 57999999877 421100000001100000
Q ss_pred ---h------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-CceEEEeecCC---
Q 036024 153 ---T------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-NAPYVWAHFPG--- 218 (272)
Q Consensus 153 ---~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~i~l~~--- 218 (272)
. .......+.+.++.+.+. ...++++.++..++++++.+.|++. |+++..+. .+.+++-..+.
T Consensus 368 ~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~ 444 (515)
T 2jis_A 368 ALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLR 444 (515)
T ss_dssp GGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGT
T ss_pred cCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCcccc
Confidence 0 000111333444444443 3556888899999999999999987 88887643 34444333331
Q ss_pred C--ChH-----------HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024 219 R--KSW-----------DVFAEILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL 271 (272)
Q Consensus 219 ~--~~~-----------~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~ 271 (272)
. +.. .+...+.++ |+....... .....+++|+++. ++++++++++++|+++
T Consensus 445 ~~~~~~~~~~~l~~~~~~l~~~l~~~-G~~~~~~~~-~~~~~~~lRis~~~~~~t~edid~~~~~l~~~ 511 (515)
T 2jis_A 445 GKQESPDYHERLSKVAPVLKERMVKE-GSMMIGYQP-HGTRGNFFRVVVANSALTCADMDFLLNELERL 511 (515)
T ss_dssp TCTTSTTHHHHHHTHHHHHHHHHHHH-TSCEEEEEE-ETTEEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhc-CCEEEEEEE-ECCceEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 0 111 134445555 754321100 0122468999984 6899999999999875
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.69 E-value=1.6e-15 Score=140.36 Aligned_cols=248 Identities=13% Similarity=0.031 Sum_probs=148.0
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcc----c-----CCCC-------CCCce--------EEEEecCCCc
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFF----P-----DLKG-------TSRTD--------IIFFCSPNNP 57 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~----~-----dl~~-------~~~~~--------~i~~~~p~np 57 (272)
|.|++..+... +...+...| ++++++.+.+ .+. + |++. .++++ +++++|| ||
T Consensus 246 D~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~ 323 (755)
T 2vyc_A 246 DVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TY 323 (755)
T ss_dssp CEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CT
T ss_pred CEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CC
Confidence 55666555443 445566678 8888888643 221 2 4222 23444 8999998 69
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc-cCCC---CCCccc--cCCCCCceEEEecCccccCCCccc-eeEEE
Q 036024 58 TGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGC---PRSIYE--IPGAREVAIEISSFSKFSGFTGVR-LGWTV 130 (272)
Q Consensus 58 tG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~-~~~~---~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~ 130 (272)
||.+.+ +++|+++|+++++++++|++|+... +++. ..++.. .+-..++++++.|+||.++ |.+ .|+++
T Consensus 324 ~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~--g~~~g~~i~ 398 (755)
T 2vyc_A 324 DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIH 398 (755)
T ss_dssp TSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSS--CCTTCEEEE
T ss_pred CceecC---HHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECcccccc--CcCCeeeee
Confidence 999977 8999999999999999999997532 2221 112211 1112457789999999874 444 56777
Q ss_pred eccc--ccccCCcchHHHHHhhh-hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-C------
Q 036024 131 VPEE--LLFSSGFPVINDFNRII-CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-G------ 200 (272)
Q Consensus 131 ~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------ 200 (272)
++++ .+. ...+.... .....+++.....++.+++........++..+++.++.+++++.|+++ |
T Consensus 399 ~~~~~~~i~------~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~ 472 (755)
T 2vyc_A 399 VREGRGAIN------FSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADG 472 (755)
T ss_dssp EECCBTCCC------HHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ecCcccccC------HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 7665 211 12222222 222233454444443333331111213567778888888888888775 4
Q ss_pred ---CeEecCC-------------------------------------------Cc------eEEEeecCC----------
Q 036024 201 ---IKVYGGI-------------------------------------------NA------PYVWAHFPG---------- 218 (272)
Q Consensus 201 ---~~~~~~~-------------------------------------------~~------~~~~i~l~~---------- 218 (272)
+++.++. .+ .-+.+.+++
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~ 552 (755)
T 2vyc_A 473 SWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEET 552 (755)
T ss_dssp CCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSS
T ss_pred cceeeccCchhccccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCcccc
Confidence 5544331 11 234555652
Q ss_pred -CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024 219 -RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL 271 (272)
Q Consensus 219 -~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~ 271 (272)
.+..++.. .|+++||.+... +.+.+|+.+ ..|++++++++++|+++
T Consensus 553 g~~~~~l~~-~L~~~gI~~e~~------~~~~v~~~~~~g~t~~~~~~l~~al~~~ 601 (755)
T 2vyc_A 553 GVPAALVTA-WLGRHGIVPTRT------TDFQIMFLFSMGVTRGKWGTLVNTLCSF 601 (755)
T ss_dssp CCCHHHHHH-HHHTTTCCCSEE------CSSEEEEECCTTCCTTTTHHHHHHHHHH
T ss_pred CCcHHHHHH-HHHHCCCEEeec------CCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 22245444 456689887532 257788885 55899999888888764
No 226
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.68 E-value=1.4e-15 Score=130.37 Aligned_cols=243 Identities=14% Similarity=0.057 Sum_probs=147.9
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----C--CC--ceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----T--SR--TDIIFFCSPNNPTGHAATQNQLEQLVEF 73 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~--~~--~~~i~~~~p~nptG~~~~~~~l~~l~~~ 73 (272)
|.|++..+.+. +...+...| +++.++++++ ++.+|++. . ++ +|+|+ |+||||...+ +++|.++
T Consensus 79 d~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~l 151 (377)
T 3ju7_A 79 KYALMPSFTFPATPLAAIWCGLEPYFIDISID-DWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEEL 151 (377)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHH
Confidence 66777776665 777788888 9999999865 56677443 1 34 77776 6789999877 8889999
Q ss_pred HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024 74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT 153 (272)
Q Consensus 74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
|+ +|+++|+|++|....... ...+. ....+..++..+.+|.++ +| +.|+++++++.+ .+.+...+..
T Consensus 152 a~-~~~~vi~D~a~a~g~~~~-~~~~g--~~~~d~~~~S~~~~K~l~-~g-~gG~~~~~~~~l-------~~~~~~~~~~ 218 (377)
T 3ju7_A 152 EK-KGVPVVVDAAPGFGLMNG-GMHYG--QDFSGMIIYSFHATKPFG-IG-EGGLIYSKNEED-------IQRIKRMGNF 218 (377)
T ss_dssp HH-TTCCBEEECTTCTTCEET-TEETT--TTCSSEEEEECBTTSSSC-CB-SCEEEEESCHHH-------HHHHHHHTBT
T ss_pred Hh-cCCEEEEECCCccCCeEC-CEecc--CCCCcEEEEECCCCCcCC-CC-CcEEEEECCHHH-------HHHHHHHHhc
Confidence 99 999999999998543211 11110 001232233334569998 45 678888776542 4444433321
Q ss_pred ------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC---CeEecCCC--c--eEEEe
Q 036024 154 ------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG---IKVYGGIN--A--PYVWA 214 (272)
Q Consensus 154 ------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---~~~~~~~~--~--~~~~i 214 (272)
.....+.+...++...+ +.+++..++.+++++++.+.|++++ ..+..... . .++.+
T Consensus 219 g~~~~~~~~~~g~~~~~~~~~aa~~~~~l-----~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (377)
T 3ju7_A 219 GFDTNRECTMMGFNCKMSEYAAAIGIATM-----KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPI 293 (377)
T ss_dssp TBCTTSCBCSSCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEE
T ss_pred CCCCCCceeeccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEE
Confidence 12223333333222222 3446677788888888888888874 22322111 1 23445
Q ss_pred ecCCCC-hHHHHHHHHHhcCeEeeCCCC--CCC--------CC---------CCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024 215 HFPGRK-SWDVFAEILEKTHITTVPGSG--FGP--------GG---------EEYIRISGF--GHRESILEASRRLEALF 272 (272)
Q Consensus 215 ~l~~~~-~~~~~~~ll~~~gi~v~~g~~--~~~--------~~---------~~~~R~s~~--~~~~~i~~~l~~l~~~l 272 (272)
.+++.. ..++...| ++.||.+..+.. +.. .+ .+.+|++++ .+++|+++.++.|++++
T Consensus 294 ~~~~~~~~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~ 372 (377)
T 3ju7_A 294 LCPEEVRNKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKV 372 (377)
T ss_dssp ECCTTSCHHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC--
T ss_pred EeCChhhHHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 555422 45555555 555999977651 110 00 357888874 48999999999998754
No 227
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.66 E-value=1.7e-15 Score=129.72 Aligned_cols=238 Identities=12% Similarity=0.093 Sum_probs=153.5
Q ss_pred cccCccc-chHHhcccceeEEeecC--CCCC--cccC-CCC--CCCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcC
Q 036024 8 IVGQAGD-LEDEVGKYCNIEYLECG--PGNN--FFPD-LKG--TSRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNG 78 (272)
Q Consensus 8 ~~~~~~~-~~~~~~~~g~~~~~~~~--~~~~--~~~d-l~~--~~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~ 78 (272)
+.+.+.. +...+++.|++..++.+ .+ | ..++ ++. .++++++++++.+|.||.. .+ +++|. ++
T Consensus 122 ~~~~~~~~~~~~a~~~G~v~~v~~~~~~~-G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~p---i~~i~-----~g 192 (386)
T 3qm2_A 122 DAGYWAASAIKEAKKYCAPQIIDAKITVD-GKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDE---TPDFG-----PE 192 (386)
T ss_dssp ESSHHHHHHHHHHTTTSEEEEEECEEEET-TEEEECCGGGCCCCTTCSCEEECSEETTTTEECCC---CCCCC-----TT
T ss_pred eCCHHHHHHHHHHHHhCCeEEEecCcccC-CCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCc---hhhhc-----CC
Confidence 3444443 55566777777788876 33 4 3333 222 3789999999889999996 65 44443 79
Q ss_pred CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc---chHHHHHhhh--hh
Q 036024 79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF---PVINDFNRII--CT 153 (272)
Q Consensus 79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~---~~~~~~~~~~--~~ 153 (272)
+++++|.+++. +..+..+..++ +...|..|.+|.+| +|+++++++.+....+ ...+ +.... ..
T Consensus 193 ~~~~vDa~qs~---g~~pidv~~~~------~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~-~~~~~~~~~ 260 (386)
T 3qm2_A 193 VVVTADFSSTI---LSAPLDVSRYG------VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILD-YTVLNDNDS 260 (386)
T ss_dssp CCEEEECTTTT---TSSCCCGGGCS------EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGC-HHHHHHC--
T ss_pred CEEEEEccccc---CCCCCCccccC------EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHH-HHHHhhcCC
Confidence 99999999874 22233444442 45688999999778 8999998887532221 1111 11111 11
Q ss_pred ccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEe-c-C--CCceEEEeecCC-CChHHHHHH
Q 036024 154 CFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVY-G-G--INAPYVWAHFPG-RKSWDVFAE 227 (272)
Q Consensus 154 ~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~-~--~~~~~~~i~l~~-~~~~~~~~~ 227 (272)
...+++.....++.++++..... .++++.++.++.++++++.|+++|+... . + .....+.+.+++ ..+.++...
T Consensus 261 ~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~ 340 (386)
T 3qm2_A 261 MFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLDKVFLEE 340 (386)
T ss_dssp -----CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCccccHHHHHH
Confidence 22346666666666666533333 5788999999999999999999876322 1 1 234567778874 123455555
Q ss_pred HHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024 228 ILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL 271 (272)
Q Consensus 228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~ 271 (272)
++++||.+.+|..+ .+.+|+|++ +|++|++.+++.|+++
T Consensus 341 -L~~~gI~~~~g~~~----~~~iRiS~~~~~t~edId~l~~~l~~~ 381 (386)
T 3qm2_A 341 -SFAAGLHALKGHRV----VGGMRASIYNAMPIEGVKALTDFMIDF 381 (386)
T ss_dssp -HHHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred -HHHCCCEEeCCCCC----cCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 56669999887644 245999974 5899999999999875
No 228
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.63 E-value=5.3e-14 Score=120.95 Aligned_cols=240 Identities=12% Similarity=0.084 Sum_probs=144.8
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
|.|++..+.+. +...+...| +++.++.+++ .+.+|++. .+++++++++| ++|... ++++|.++|++
T Consensus 81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~---~~~~i~~l~~~ 153 (390)
T 3b8x_A 81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPN---NFDEINKIIGG 153 (390)
T ss_dssp CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCC---CHHHHHHHHTT
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChh---hHHHHHHHHHH
Confidence 55666666555 667777788 9999999865 45556433 25789999874 456554 49999999999
Q ss_pred cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh---
Q 036024 77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--- 153 (272)
Q Consensus 77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--- 153 (272)
+|+++|+|++|....... . ..+....+...+....+|.++ +| +.|+++++++.+ .+.+......
T Consensus 154 ~~~~li~D~a~~~g~~~~-~---~~~g~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l-------~~~~~~~~~~g~~ 220 (390)
T 3b8x_A 154 RDIILLEDNCESMGATFN-N---KCAGTFGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEI-------YHILLCIRAHGWT 220 (390)
T ss_dssp SCCEEEEECTTCTTCEET-T---EETTSSSSEEEEECCTTSSSC-SS-SCEEEEESCHHH-------HHHHHHHTBTTBS
T ss_pred cCCEEEEECcCcccCEEC-C---cccccccceEEEEccCCCCCc-cC-CceEEEeCCHHH-------HHHHHHHHhcCCC
Confidence 999999999998432211 1 112111121122222345554 33 348988876331 2222221110
Q ss_pred ----------------------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe
Q 036024 154 ----------------------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY 204 (272)
Q Consensus 154 ----------------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 204 (272)
.....+.+...++...+ +++++..++.+++++++.+.|+++ |+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~ 295 (390)
T 3b8x_A 221 RNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYLDVQ 295 (390)
T ss_dssp TTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSEEEC
T ss_pred ccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCcccC
Confidence 00113334333333322 455778889999999999999987 78776
Q ss_pred cCC--Cce-EEEeecC---CCChHHHHHHHHHhcCeEeeC---CCCCCC-C----------C---------CCeEEEEc-
Q 036024 205 GGI--NAP-YVWAHFP---GRKSWDVFAEILEKTHITTVP---GSGFGP-G----------G---------EEYIRISG- 254 (272)
Q Consensus 205 ~~~--~~~-~~~i~l~---~~~~~~~~~~ll~~~gi~v~~---g~~~~~-~----------~---------~~~~R~s~- 254 (272)
.+. .++ .+++.++ +.+..++...|. +.||.+.+ ++.+.. . . .+.+|+++
T Consensus 296 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~ 374 (390)
T 3b8x_A 296 QETGESSWFGFSFIIKKDSGVIRKQLVENLN-SAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNH 374 (390)
T ss_dssp CCCSBCCCCEEEEEECTTSCCCHHHHHHHHH-HTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECC
T ss_pred CCCCCcccEEEEEEecCcCcccHHHHHHHHH-HCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCC
Confidence 542 222 3556666 345566666664 55999986 332211 0 0 13589997
Q ss_pred -cCCHHHHHHHHHHHH
Q 036024 255 -FGHRESILEASRRLE 269 (272)
Q Consensus 255 -~~~~~~i~~~l~~l~ 269 (272)
..|++|++++++.|+
T Consensus 375 ~~~t~~di~~i~~~l~ 390 (390)
T 3b8x_A 375 QIELFDEIDYLREVLK 390 (390)
T ss_dssp SSCCHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHhhC
Confidence 458999999988763
No 229
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.56 E-value=7.1e-14 Score=122.12 Aligned_cols=207 Identities=15% Similarity=0.155 Sum_probs=136.5
Q ss_pred CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-.-+...|.+ .+++.+++|.++|++||+++|.||++.++...|.......+...+|.+ +++|.+| .|
T Consensus 226 ~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDiv----t~gK~lg-gg 300 (456)
T 4atq_A 226 QVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDII----TMAKGIA-GG 300 (456)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE----EECGGGG-TT
T ss_pred ceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchh----hhhhccc-Cc
Confidence 45556555446666765 456789999999999999999999999876555444444444455532 5789998 89
Q ss_pred cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024 124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---- 199 (272)
Q Consensus 124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 199 (272)
+.+|.++++++. .+.+.......+++.++++..|+.+.++.... +...++.++..+++++.|+++
T Consensus 301 ~P~~av~~~~~i--------~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~ 369 (456)
T 4atq_A 301 LPLSAITGRADL--------LDAVHPGGLGGTYGGNPVACAAALAAIDTMEQ---HDLNGRARHIEELALGKLRELAAEL 369 (456)
T ss_dssp SSCEEEEEEHHH--------HTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCceeeEecHHH--------HhcccccCCCCCCCCChHHHHhhHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999887 34444444556777889999988888873322 223445555555555555443
Q ss_pred C---CeEec--CCCceEEEeecCCC----C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHH
Q 036024 200 G---IKVYG--GINAPYVWAHFPGR----K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEA 264 (272)
Q Consensus 200 g---~~~~~--~~~~~~~~i~l~~~----~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~ 264 (272)
. -.+.+ -..|.++.+++... . ...+...++++ |+.+.++... .+.+||. +..++++++++
T Consensus 370 ~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~-Gvl~~~~g~~----~~~irl~PpL~it~~~id~~ 444 (456)
T 4atq_A 370 SAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKE-GVIILTCGTY----GNVIRLLPPLVISDELLIDG 444 (456)
T ss_dssp C-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECEEECTT----SCEEEECCCTTCCHHHHHHH
T ss_pred ccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHC-CCEEEecCCC----CCEEEEECCCCCCHHHHHHH
Confidence 1 11111 01356666776311 1 23455566655 9998764322 3579998 46699999999
Q ss_pred HHHHHHhC
Q 036024 265 SRRLEALF 272 (272)
Q Consensus 265 l~~l~~~l 272 (272)
+++|+++|
T Consensus 445 l~~l~~al 452 (456)
T 4atq_A 445 LEVLAAAI 452 (456)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998864
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.56 E-value=7.5e-14 Score=127.45 Aligned_cols=249 Identities=14% Similarity=0.048 Sum_probs=142.4
Q ss_pred cccccccCccc-chHHhcccc-eeEEeecCCCCCccc---------CCCC-------CCCce---EEEEecCCCccccCC
Q 036024 4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFP---------DLKG-------TSRTD---IIFFCSPNNPTGHAA 62 (272)
Q Consensus 4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~---------dl~~-------~~~~~---~i~~~~p~nptG~~~ 62 (272)
|.|++..+... +...+...| ++++++.+.+ .+.+ |++. .+++| ++++++| ||+|.++
T Consensus 236 D~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~ 313 (715)
T 3n75_A 236 STILIDRNCHKSLTHLMMMSDVTPIYFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLY 313 (715)
T ss_dssp CEEEEESSCCHHHHHHHHHSCCEEEEECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEE
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEecccc-ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccC
Confidence 45555554444 555566677 8888887643 3332 3222 23444 8999999 9999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc-cCCCCCCccccCC--CCCce-EEEecCccccCCCccceeEEEeccccccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGCPRSIYEIPG--AREVA-IEISSFSKFSGFTGVRLGWTVVPEELLFS 138 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~--~~~~~-i~~~s~sK~~g~~g~r~G~~~~~~~~~~~ 138 (272)
+ +++|+++|++++ +++||+|+... +.+.......+.. ..+.+ ++++|+||+++.+ ...|++.++++..
T Consensus 314 d---l~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i~-- 385 (715)
T 3n75_A 314 N---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDVN-- 385 (715)
T ss_dssp C---HHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCC-TTCEEEEEESCCC--
T ss_pred C---HHHHHHHhCcCc--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCC-CCeeEEEeCchhh--
Confidence 8 777777776553 79999998543 3322111222221 13443 6699999998632 1358888877631
Q ss_pred CCcchHHHHHhhhhhccC-CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-----C--CeEecCCC--
Q 036024 139 SGFPVINDFNRIICTCFN-GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-----G--IKVYGGIN-- 208 (272)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g--~~~~~~~~-- 208 (272)
...+......... +++.+...++..++..-.....++.++++.++.+++++.|+++ | +++..++.
T Consensus 386 -----~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~ 460 (715)
T 3n75_A 386 -----EETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHID 460 (715)
T ss_dssp -----HHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCC
T ss_pred -----HHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCccccc
Confidence 3344444433333 3444444433334332111233667888999999999998775 2 34433210
Q ss_pred ---------------------c------eEEEeecCCC----------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEE
Q 036024 209 ---------------------A------PYVWAHFPGR----------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIR 251 (272)
Q Consensus 209 ---------------------~------~~~~i~l~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R 251 (272)
+ .=+.+..++. -+...+.+.|+++||.+.-...+ .-.+-
T Consensus 461 ~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~----~vl~l 536 (715)
T 3n75_A 461 TTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPY----NLLFL 536 (715)
T ss_dssp SCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEETT----EEEEE
T ss_pred chhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecCCC----cEEEE
Confidence 0 0134444421 12234555557779988543322 12233
Q ss_pred EEccCCHHHHHHHHHHHHHh
Q 036024 252 ISGFGHRESILEASRRLEAL 271 (272)
Q Consensus 252 ~s~~~~~~~i~~~l~~l~~~ 271 (272)
+|+..+++++++++++|.++
T Consensus 537 ~s~g~~~~~~~~L~~aL~~~ 556 (715)
T 3n75_A 537 FSIGIDKTKALSLLRALTDF 556 (715)
T ss_dssp CCTTCCHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHH
Confidence 44566888888888887653
No 231
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.56 E-value=5.3e-14 Score=122.50 Aligned_cols=200 Identities=16% Similarity=0.207 Sum_probs=130.2
Q ss_pred CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
+++.+|++-..+...|.+. +++.+++|.++|++||+++|+||++.+ .. +.......+...+|.+ +++|.+| .
T Consensus 219 ~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~-G~~~a~e~~gv~PDi~----t~gK~lg-g 291 (454)
T 4ao9_A 219 PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RL-APHGLANKLGIRSDLT----TLGKYIG-G 291 (454)
T ss_dssp GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GG-STTCHHHHHTCCCSEE----EEEGGGG-T
T ss_pred CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CC-ccccchhccCCCCcEE----EeccccC-C
Confidence 4566666644466667554 577899999999999999999999974 21 2122222233344532 6899998 8
Q ss_pred ccceeEEEecccccccCCcchHHHHH----hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024 123 GVRLGWTVVPEELLFSSGFPVINDFN----RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS 198 (272)
Q Consensus 123 g~r~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 198 (272)
|+.+|+++++.+. .+.+. ......+++.++++..|+.+.|+.... ++..++++++.++|++.|++
T Consensus 292 G~Piga~~~~~ei--------~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 292 GMSFGAFGGRADV--------MALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT---PEAAGALAERGEALRARLNA 360 (454)
T ss_dssp TSSCEEEEECHHH--------HGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceeeeeHHHH--------HHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHH
Confidence 8999999999888 33332 122344556788888888888874332 34556677777777777765
Q ss_pred C----CC--eEecCCCceEEEeecCC-----------CCh---HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCH
Q 036024 199 L----GI--KVYGGINAPYVWAHFPG-----------RKS---WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHR 258 (272)
Q Consensus 199 ~----g~--~~~~~~~~~~~~i~l~~-----------~~~---~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~ 258 (272)
+ ++ .+.+ -|.++.+.+.. .+. ..++..++++ ||++.|. +.+.++...|+
T Consensus 361 l~~~~~~~~~vrg--~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~-Gv~~~p~--------~~~~~s~~~T~ 429 (454)
T 4ao9_A 361 LCANEGVAMQFTG--IGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNE-DIYSSPR--------GFVVLSLPLTD 429 (454)
T ss_dssp HHHHHTBSCEEEE--ETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHT-TEECCTT--------CEEECCTTCCH
T ss_pred HHhhCCCCEEEee--eceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHC-CEEEcCC--------CCEEEeCCCCH
Confidence 4 32 3333 24444455421 111 2345566766 9998763 34556666799
Q ss_pred HHHHHHHHHHHHhC
Q 036024 259 ESILEASRRLEALF 272 (272)
Q Consensus 259 ~~i~~~l~~l~~~l 272 (272)
+|+++++++|+++|
T Consensus 430 ~dId~~l~al~~~l 443 (454)
T 4ao9_A 430 ADIDRYVAAIGSFI 443 (454)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998864
No 232
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.48 E-value=4.4e-12 Score=108.27 Aligned_cols=234 Identities=13% Similarity=0.107 Sum_probs=154.2
Q ss_pred eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024 24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP 96 (272)
Q Consensus 24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~ 96 (272)
+.++++++++ ...+|.++ ..+||+|++-...+|-= ++ .+++.++|++.|+++++|.+|. +++.++..
T Consensus 177 ~~~~Y~vd~~-t~~IDyd~~~~~A~~~kPklIi~G~SaY~r~--id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~ 250 (490)
T 3ou5_A 177 ESMPYKLNPK-TGLIDYNQLALTARLFRPRLIIAGTSAYARL--ID---YARMREVCDEVKAHLLADMAHISGLVAAKVI 250 (490)
T ss_dssp ---CBCEETT-TTEECHHHHHHHHHHHCCSEEEECCSSCCSC--CC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSS
T ss_pred cccccccCCC-CCcccHHHHHHHHhhcCCCeEEECCccCccc--cC---HHHHHHHHhhcccEEEechhhhhhhhccccc
Confidence 5667777766 44455333 37899999976666643 33 8889999999999999999996 66666655
Q ss_pred CCccccCCCCCceEEEecCccccCCCccceeEEEeccccccc-------CCcchHHHHHhhhhhccCCcchHHHHHHHHh
Q 036024 97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS-------SGFPVINDFNRIICTCFNGASNIAQAGGLAC 169 (272)
Q Consensus 97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 169 (272)
++..... | ++.+|.+|++ +|-|-|.|.++++.... ....+.+.+.+...+...+.+.....|+.++
T Consensus 251 psP~~~A---D--vVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAV 323 (490)
T 3ou5_A 251 PSPFKHA---D--IVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAV 323 (490)
T ss_dssp CCGGGTC---S--EEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHH
T ss_pred CCccccc---e--EEeccccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHH
Confidence 5444432 2 8899999998 56677988887643110 0012355666665555544444444444433
Q ss_pred -cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCC-ChHHHHHHHHHhcCeEee----CCCCC
Q 036024 170 -LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGR-KSWDVFAEILEKTHITTV----PGSGF 242 (272)
Q Consensus 170 -l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~----~g~~~ 242 (272)
+.+......++..+++.+|++.|.+.|.+.|+++.. .-+...+++++... .+...++.+|++.||.++ |+. -
T Consensus 324 af~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D-~ 402 (490)
T 3ou5_A 324 ALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGD-R 402 (490)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTC-C
T ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCC-C
Confidence 433233456888999999999999999999999865 33466788898632 244567778889999986 333 1
Q ss_pred CCCCCCeEEEEc------cCCHHHHHHHHHHHHHh
Q 036024 243 GPGGEEYIRISG------FGHRESILEASRRLEAL 271 (272)
Q Consensus 243 ~~~~~~~~R~s~------~~~~~~i~~~l~~l~~~ 271 (272)
.+-.++.+|++. .-.++|+.+..+.|.++
T Consensus 403 sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~ 437 (490)
T 3ou5_A 403 SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG 437 (490)
T ss_dssp CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence 222356899994 22577887777776554
No 233
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.47 E-value=4.3e-14 Score=131.77 Aligned_cols=212 Identities=14% Similarity=0.092 Sum_probs=130.9
Q ss_pred CceEEEEecC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024 45 RTDIIFFCSP-NNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT 122 (272)
Q Consensus 45 ~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 122 (272)
++.++++-.. ++..|... +++.+++|.++|++||+++|+||++.++...|...........+| + .+++|.+| .
T Consensus 594 ~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PD--i--itlsK~L~-g 668 (831)
T 4a0g_A 594 HVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPD--I--ACFAKLLT-G 668 (831)
T ss_dssp EEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCS--E--EEECGGGG-T
T ss_pred cEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCc--E--EEEecccc-c
Confidence 4455555443 78888766 778899999999999999999999998765554333333333344 2 27999998 6
Q ss_pred c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH----HHHHHHHHHHHHH-HHHHHHHH
Q 036024 123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL----EAVHSVVDYYKEN-TKILIDTL 196 (272)
Q Consensus 123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~-~~~l~~~L 196 (272)
| +++|+++++++..+..... .....+....+++.+++++.++.+.++.... +.+.+..+++++. .+.+.+.+
T Consensus 669 G~~Plgav~~~~~i~~~~~~~--~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l 746 (831)
T 4a0g_A 669 GMVPLAVTLATDAVFDSFSGD--SKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQI 746 (831)
T ss_dssp TSSCCEEEEECHHHHHTTCSS--CGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHH
T ss_pred CccCcEEEEECHHHHHHHhcc--cccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 7999999999873211000 0111122345566888888888887762111 1111111111110 12344455
Q ss_pred HhC-CCeEecCCCceEEEeecCCC---------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHH
Q 036024 197 ASL-GIKVYGGINAPYVWAHFPGR---------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEA 264 (272)
Q Consensus 197 ~~~-g~~~~~~~~~~~~~i~l~~~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~ 264 (272)
.+. .+..... .|.+..+++... ....+...+++ .||.+.|+ .+.+|++ +..++++++++
T Consensus 747 ~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e-~Gv~v~p~-------g~~lrl~pp~~~t~e~id~~ 817 (831)
T 4a0g_A 747 SSHSAVQRVVV-IGTLFALELKADASNSGYASLYAKSLLIMLRE-DGIFTRPL-------GNVIYLMCGPCTSPEICRRL 817 (831)
T ss_dssp HHSTTEEEEEE-ETTEEEEEEC---------CHHHHHHHHHHHH-TTEECCCB-------TTEEEEECCTTCCHHHHHHH
T ss_pred hhCCCceeEee-cccEEEEEEecCccccccchHHHHHHHHHHHH-CCcEEEec-------CCEEEEECCCCCCHHHHHHH
Confidence 555 3333332 466777777421 12345555655 49999874 2689998 46699999999
Q ss_pred HHHHHHhC
Q 036024 265 SRRLEALF 272 (272)
Q Consensus 265 l~~l~~~l 272 (272)
+++|++++
T Consensus 818 ~~~l~~~l 825 (831)
T 4a0g_A 818 LTKLYKRL 825 (831)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998763
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.47 E-value=6.6e-13 Score=116.46 Aligned_cols=203 Identities=11% Similarity=0.057 Sum_probs=134.0
Q ss_pred CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024 45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG 123 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 123 (272)
++.++++-..+...|++. +++.+++|.++|++||+++|.||+..+|...+.......+...+|.+ +++|.++ .|
T Consensus 236 ~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~----t~~K~l~-gG 310 (473)
T 4e3q_A 236 TIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAI----ISSKNLT-AG 310 (473)
T ss_dssp GEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEE----EECGGGG-TT
T ss_pred ceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChH----Hhccccc-CC
Confidence 344444444466667654 56679999999999999999999999876555444334444455533 5799998 66
Q ss_pred -cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024 124 -VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195 (272)
Q Consensus 124 -~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (272)
+.+|.++++++. .+.+.. .....+++.++++..|+.+.++.... +...++.++..++|++.
T Consensus 311 ~~Pl~av~~~~~i--------~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~ 379 (473)
T 4e3q_A 311 FFPMGAVILGPEL--------SKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN---EGLAENVRRLAPRFEER 379 (473)
T ss_dssp SSCCEEEEECHHH--------HHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH---SSHHHHHHHHHHHHHHH
T ss_pred CCCcccccccHHH--------HHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc---ccHHHHHHHHHHHHHHH
Confidence 899999999988 343322 22445666888888888888873332 33455566666777777
Q ss_pred HHhC----CCeEecCCCceEEEeecC-CC----------C-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCC
Q 036024 196 LASL----GIKVYGGINAPYVWAHFP-GR----------K-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGH 257 (272)
Q Consensus 196 L~~~----g~~~~~~~~~~~~~i~l~-~~----------~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~ 257 (272)
|+++ .+.-... .|.++-+++. +. . ...+...++++ |+.+.|.. +.+|++ +..+
T Consensus 380 L~~l~~~~~v~~vRG-~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~g-------~~i~l~PPL~it 450 (473)
T 4e3q_A 380 LKHIAERPNIGEYRG-IGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDL-GLICRPLG-------QSVVLCPPFILT 450 (473)
T ss_dssp HHHHTTSTTEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECEEET-------TEEEECCCTTCC
T ss_pred HHHHhcCCCeeEEee-cceEEEEEEecCccccccccccHHHHHHHHHHHHHC-CcEEEecC-------CEEEEeCCCCCC
Confidence 7654 2222221 3556666652 10 1 23355555555 99997642 468888 5679
Q ss_pred HHHHHHHHHHHHHhC
Q 036024 258 RESILEASRRLEALF 272 (272)
Q Consensus 258 ~~~i~~~l~~l~~~l 272 (272)
++++++++++|+++|
T Consensus 451 ~~eid~~~~~l~~al 465 (473)
T 4e3q_A 451 EAQMDEMFDKLEKAL 465 (473)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988764
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.12 E-value=2e-09 Score=92.40 Aligned_cols=240 Identities=14% Similarity=0.063 Sum_probs=136.4
Q ss_pred chHHhcccc-eeEEeecCCC-CCcccCCCC-------C-CCceEEEEecC-CCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPG-NNFFPDLKG-------T-SRTDIIFFCSP-NNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~-------~-~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
....+...| +.++++...+ .....|++. . .+..+++++++ .|..+.+ .++++|+++|++||+++++
T Consensus 175 v~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllV 251 (501)
T 3hl2_A 175 CFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIV 251 (501)
T ss_dssp HHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEE
Confidence 444555667 7777776322 145555333 1 24444444444 4534454 3599999999999999999
Q ss_pred cccCCccccCCC--CCCccccCCCCCceEEEecCccccCCCccceeEEE-ecccccccCCcchHHHHHhhhhhccCCcch
Q 036024 84 DSAYAAYVTDGC--PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLFSSGFPVINDFNRIICTCFNGASN 160 (272)
Q Consensus 84 D~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (272)
|++|+....... +.....+. ..| +++.|.+|.+-.| .. |+++ ..++.. +..+..... ...+.
T Consensus 252 DeAhGah~~~~~~lp~sA~~~G-rAD--~vVqS~HK~llvp-IG-G~ii~~~d~e~-------l~~~~~~yP---Gr~S~ 316 (501)
T 3hl2_A 252 NNAYGVQSSKCMHLIQQGARVG-RID--AFVQSLDKNFMVP-VG-GAIIAGFNDSF-------IQEISKMYP---GRASA 316 (501)
T ss_dssp ECTTCTTCHHHHHHHHHHHHHS-CCC--EEEEEHHHHHCCC-SS-CEEEEESCHHH-------HHHHHHTSC---SCBCS
T ss_pred eCcchhhhhhhhhhHHHHHhcC-CCc--EEEecccccceee-cC-ceEEEeCCHHH-------HHHHHHhCC---CCCCC
Confidence 999985331111 11222332 122 7888999988544 22 4444 444321 334332221 11222
Q ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCC-CceEEEeecCCC------ChHHHHHHHH
Q 036024 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGI-NAPYVWAHFPGR------KSWDVFAEIL 229 (272)
Q Consensus 161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~-~~~~~~i~l~~~------~~~~~~~~ll 229 (272)
...+.+...+...+.+.++++.++..+++++|++.|+++ |-++.... -..-+.+.+... ...++...|.
T Consensus 317 Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf 396 (501)
T 3hl2_A 317 SPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLF 396 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHH
Confidence 333323344444555666888999999999999999885 55554432 233455555421 2345566665
Q ss_pred Hhc--CeEe-eCCC----------CCCCC----CCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024 230 EKT--HITT-VPGS----------GFGPG----GEEYIRIS--GFGHRESILEASRRLEALF 272 (272)
Q Consensus 230 ~~~--gi~v-~~g~----------~~~~~----~~~~~R~s--~~~~~~~i~~~l~~l~~~l 272 (272)
.+. |-.+ .+|. .|+.. ...++-++ +..+++|++.++++|++++
T Consensus 397 ~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~ 458 (501)
T 3hl2_A 397 TRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCL 458 (501)
T ss_dssp HTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred hcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 552 3334 3344 44432 14566665 4569999999999998763
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.95 E-value=2.2e-08 Score=86.64 Aligned_cols=241 Identities=13% Similarity=0.027 Sum_probs=129.9
Q ss_pred chHHhcccc-eeEEeecCC-CCCcccCCCC-------CC-CceEEEEecC-CCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGP-GNNFFPDLKG-------TS-RTDIIFFCSP-NNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~-------~~-~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
....+.-.| +.++++... +.....|++. .+ +.+.+++.+| .+.+|.+- ++++|+++|++||+++++
T Consensus 157 v~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~d---dl~~Ia~ia~~~gi~l~V 233 (450)
T 3bc8_A 157 CFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPD---RLEELAVICANYDIPHVV 233 (450)
T ss_dssp HHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCC---CHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceec---CHHHHHHHHHHCCCeEEE
Confidence 445556677 777776532 1244555333 12 4566666666 44456664 599999999999999999
Q ss_pred cccCCccccCCCCCCccccC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHH
Q 036024 84 DSAYAAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162 (272)
Q Consensus 84 D~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (272)
|++|+.........+...+. +..| .++.|.+|.++ .....+++...+... ...+........ +++++
T Consensus 234 D~A~G~~~~~~~~l~~~a~~~~~AD--~~v~S~HK~l~-a~~~~~~l~~rd~~~-------~~~~~~~~~g~~--s~Sps 301 (450)
T 3bc8_A 234 NNAYGLQSSKCMHLIQQGARVGRID--AFVQSLDKNFM-VPVGGAIIAGFNEPF-------IQDISKMYPGRA--SASPS 301 (450)
T ss_dssp ECTTTTTCHHHHHHHHHHHHHSCCC--EEEEEHHHHHS-CCSSCEEEEESCHHH-------HHHHHHHSCSCB--CSHHH
T ss_pred ECCCchhhhhhHhHHHHHhcccCCC--EEEECCccCCC-chhccEEEEecCHHH-------HHHHHHHhhcCC--cccHH
Confidence 99998532211011101110 1123 67789999986 434456666643331 233322211111 23344
Q ss_pred HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCC-ceEEEeecC------CCChHHHHHHHHHh
Q 036024 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGIN-APYVWAHFP------GRKSWDVFAEILEK 231 (272)
Q Consensus 163 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~-~~~~~i~l~------~~~~~~~~~~ll~~ 231 (272)
......++. .+.+.+.+..++..++++++++.++++ |..+.+.+. +.-..+.+. +.+...+...+...
T Consensus 302 L~l~~~l~~-~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~ 380 (450)
T 3bc8_A 302 LDVLITLLS-LGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTR 380 (450)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHT
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCC
Confidence 443444443 355556666667777788888888654 676665332 111223232 22444555554333
Q ss_pred --cCeEeeC---------------CCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024 232 --THITTVP---------------GSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL 271 (272)
Q Consensus 232 --~gi~v~~---------------g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~ 271 (272)
.|..+.+ |.........++=+. +..+++++++++++|+++
T Consensus 381 g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~ 439 (450)
T 3bc8_A 381 QVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKC 439 (450)
T ss_dssp TCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHH
Confidence 1333331 111111223444444 456899999999998875
No 237
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=79.55 E-value=3.4 Score=34.60 Aligned_cols=68 Identities=13% Similarity=0.085 Sum_probs=47.5
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceE-EEEe-----cCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDI-IFFC-----SPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~-i~~~-----~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
+.+..+.++ ++....+.++.+|.++++..+...- -.+. ....+.+..++.+++++|++-|+++++.||
T Consensus 38 ~id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~~~~~~~~~g~YT~~di~eiv~YA~~rgI~VI 112 (367)
T 1yht_A 38 FIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIELI 112 (367)
T ss_dssp HHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCCcCCCCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 445667788 9999999988899988665432210 0110 011223456899999999999999999999
No 238
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=79.54 E-value=3.4 Score=35.59 Aligned_cols=66 Identities=20% Similarity=0.267 Sum_probs=48.1
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEE---E--------E-----ecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDII---F--------F-----CSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i---~--------~-----~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
+.+..+.++ ++....+..+ +|.+.++..| .... + + ...++|.|..++.+++++|++-|+++
T Consensus 30 ~ID~mA~~KlN~lH~HltDd-gwriei~~~p-l~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~YT~~di~eIv~YA~~r 107 (442)
T 2yl5_A 30 IVDKASELGYSDVHLLLGND-GLRFLLDDMT-ITANGKTYASDDVKKAIIEGTKAYYDDPNGTALTQAEVTELIEYAKSK 107 (442)
T ss_dssp HHHHHHHHTCCEEEEEEESS-SBCBCCSCCC-EEETTEEECHHHHHHHHHHHHHHHCCCTTCSCBCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCcEEEEEEcCC-CcceeccCCc-ceeceeecccccccccccCCccccccCCCCCCcCHHHHHHHHHHHHHc
Confidence 345556677 8888888766 9999988755 2100 0 0 01234678899999999999999999
Q ss_pred CCEEE
Q 036024 78 GSIII 82 (272)
Q Consensus 78 ~~~vi 82 (272)
++.||
T Consensus 108 gI~VI 112 (442)
T 2yl5_A 108 DIGLI 112 (442)
T ss_dssp TCEEE
T ss_pred CCeee
Confidence 99999
No 239
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=78.32 E-value=3 Score=36.62 Aligned_cols=66 Identities=17% Similarity=0.105 Sum_probs=49.1
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+.+..+.++ ++....+.++.+|.++++..|...- .....|.+..++.+++++|++.|+++++.||-
T Consensus 167 ~id~mA~~KlN~lh~HltDdq~wr~ei~~~P~Lt~---~Ga~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 167 TLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMR---KGSYNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp HHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHH---HHSSCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCceEEEEEecccCeeeeccccchhhh---ccccCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 345567788 8889999888899998776554210 01123546679999999999999999999994
No 240
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=73.90 E-value=2.6 Score=37.10 Aligned_cols=69 Identities=17% Similarity=0.075 Sum_probs=48.9
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEE-EEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDII-FFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+.+..+.++ ++..+.+.++.+|.++++..|+..-+ .-+....+.|..++.+++++|++.|+++++.||-
T Consensus 204 ~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 204 QIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSKGQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCccccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 445667788 88999999999999987765431100 0011112346678999999999999999999983
No 241
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=73.29 E-value=1.3 Score=35.42 Aligned_cols=68 Identities=22% Similarity=0.382 Sum_probs=47.2
Q ss_pred cccccccCcccchHHhcccceeEEeecCCCCCcccCCC---CCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLK---GTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~dl~---~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
++|++.+.||......+...++..+..++..+-.++-. -++++..++++ |+++--..++.|++.|++.
T Consensus 142 ~kV~vIG~fP~i~~~~~~~~~l~V~E~~p~~g~~p~~~~~~~lp~~D~viiT------gstlvN~Tl~~lL~~~~~a 212 (270)
T 3l5o_A 142 KKVGVVGHFPHLESLLEPICDLSILEWSPEEGDYPLPASEFILPECDYVYIT------CASVVDKTLPRLLELSRNA 212 (270)
T ss_dssp SEEEEESCCTTHHHHHTTTSEEEEEESSCCTTCEEGGGHHHHGGGCSEEEEE------THHHHHTCHHHHHHHTTTS
T ss_pred CEEEEECCchhHHHHHhcCCCEEEEECCCCCCCCChhHHHHhhccCCEEEEE------eehhhcCCHHHHHhhCCCC
Confidence 46899999966665555544888888888755544422 25889999996 3333334499999999654
No 242
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=71.84 E-value=3.4 Score=36.34 Aligned_cols=69 Identities=14% Similarity=0.116 Sum_probs=48.5
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEE-EEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDII-FFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+.+..+.++ ++..+.+.++.+|.++++..|...-+ .-+......|..++.+++++|++.|+++++.||-
T Consensus 179 ~id~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 179 YIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCccccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 345566788 88888898888999987764431000 0011122336789999999999999999999983
No 243
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=70.84 E-value=2.2 Score=37.82 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=49.6
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCce---EEE----E----e--cCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTD---IIF----F----C--SPNNPTGHAATQNQLEQLVEFARNNGSI 80 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~---~i~----~----~--~p~nptG~~~~~~~l~~l~~~~~~~~~~ 80 (272)
+.+..+.++ ++...++.++.+|.++++..|... +.- + + .-..|.|..++.+++++|++.|+++++.
T Consensus 160 ~ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI~ 239 (543)
T 3rcn_A 160 FIEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHIT 239 (543)
T ss_dssp HHHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCCE
Confidence 445567788 889999998889999987754310 000 0 0 1134557889999999999999999999
Q ss_pred EE
Q 036024 81 II 82 (272)
Q Consensus 81 vi 82 (272)
||
T Consensus 240 VI 241 (543)
T 3rcn_A 240 VI 241 (543)
T ss_dssp EE
T ss_pred Ee
Confidence 99
No 244
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=70.77 E-value=3.1 Score=35.74 Aligned_cols=66 Identities=23% Similarity=0.255 Sum_probs=47.2
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEe----------------cCCCccccCCCHHHHHHHHHHHHHc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFC----------------SPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~----------------~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
+.+..+.++ ++....+..+ ||.+.++..+ -..-.-. ..++|.|..++.+++++|++-|+++
T Consensus 27 ~ID~mA~~KlN~lH~HLtDd-gwr~ei~~~p-l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~YT~~di~eIv~YA~~r 104 (434)
T 2yl6_A 27 IIDKAKHYGYTDLHLLVGND-GLRFMLDDMS-ITANGKTYASDDVKRAIEKGTNDYYNDPNGNHLTESQMTDLINYAKDK 104 (434)
T ss_dssp HHHHHHHHTCCEEEEEEESS-SBCEECSCCC-EEETTEEECHHHHHHHHHHHHHHHCCCTTCSCEEHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCeEEEEecCC-CcccccCCCc-eeeeeeccccccchhhhhcCCccccCCCCCCccCHHHHHHHHHHHHHc
Confidence 345566777 8888888766 9998877654 2100000 0234567889999999999999999
Q ss_pred CCEEE
Q 036024 78 GSIII 82 (272)
Q Consensus 78 ~~~vi 82 (272)
++.||
T Consensus 105 gI~VI 109 (434)
T 2yl6_A 105 GIGLI 109 (434)
T ss_dssp TCEEE
T ss_pred CCEEE
Confidence 99999
No 245
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=68.42 E-value=5.8 Score=35.31 Aligned_cols=64 Identities=9% Similarity=0.007 Sum_probs=47.7
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi 82 (272)
+.+..+.++ ++..+.+.++.+|.++++..|...- .-....|..++.+++++|++.|+++++.||
T Consensus 209 ~id~mA~~KlN~lH~HltDdqgwrlei~~~P~Lt~----~Ga~~~~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 209 TIEAMAAVKLNTFHWHITDSQSFPFVTTKRPNLYK----FGALSPQKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp HHHHHHHTTCCEEEEECCCSSCCCBCCSSSHHHHH----HHSSSSSSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHcCCceEEEEeecCcCceeccccCcchhc----cCCcCCCCCcCHHHHHHHHHHHHHhCCcee
Confidence 445567788 8899999988899998876543210 001123567899999999999999999998
No 246
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=67.06 E-value=10 Score=30.36 Aligned_cols=47 Identities=9% Similarity=0.199 Sum_probs=33.3
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~ 86 (272)
..++..| +.+.+|+.+...|..+ +.+.++++++.|.++|+.+|+|-.
T Consensus 39 ~~lk~~G~N~VRi~~~~~~~w~~~-----------------------~~~~ld~~v~~a~~~Gi~Vild~h 86 (302)
T 1bqc_A 39 ADIKSHGANTVRVVLSNGVRWSKN-----------------------GPSDVANVISLCKQNRLICMLEVH 86 (302)
T ss_dssp HHHHHTTCSEEEEEECCSSSSCCC-----------------------CHHHHHHHHHHHHHTTCEEEEEEG
T ss_pred HHHHHcCCCEEEEEccCCcccCCC-----------------------CHHHHHHHHHHHHHCCCEEEEEec
Confidence 4456677 7777777643222210 247899999999999999999954
No 247
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=66.52 E-value=3.7 Score=36.03 Aligned_cols=65 Identities=15% Similarity=0.079 Sum_probs=47.5
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+.+..+.++ ++..+.+.++.+|.++++..|...-+ ....| |..++.+++++|++.|+++++.||-
T Consensus 173 ~id~ma~~KlN~lh~HltDdq~wr~e~~~~P~Lt~~---Ga~~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 173 TLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNK---GSYSL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp HHHHHHHTTCCEEEEECCCSSCCCBCCSSCHHHHHH---HSSST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCcEEEEeeccCccceeeccchhhhhcc---cCcCC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 345556788 88899998888999987765432100 01123 6678999999999999999999983
No 248
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=62.36 E-value=9.9 Score=31.23 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=31.2
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 55 NNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 55 ~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
++|.|.....+.+.++++.|+++|+.|++|-.|++..
T Consensus 50 ~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~W 86 (332)
T 1hjs_A 50 VNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW 86 (332)
T ss_dssp SSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred eCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 6677888888999999999999999999997665543
No 249
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=60.60 E-value=12 Score=30.85 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=31.5
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 55 NNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 55 ~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+||.+...+.+...++++.|+++|+.+++|=.|++..
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~w 86 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTW 86 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCCC
Confidence 5677878889999999999999999999997776543
No 250
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=55.97 E-value=20 Score=28.52 Aligned_cols=48 Identities=10% Similarity=0.202 Sum_probs=32.8
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccC
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
..++..| +.+.+|+.....|.. -..+.++++++.|+++|+.+|+|-..
T Consensus 38 ~~i~~~G~N~VRi~~~~~~~~~~-----------------------~~~~~ld~~v~~a~~~Gi~Vild~H~ 86 (294)
T 2whl_A 38 PAIAEQGANTIRIVLSDGGQWEK-----------------------DDIDTIREVIELAEQNKMVAVVEVHD 86 (294)
T ss_dssp HHHHHTTCSEEEEEECCSSSSCC-----------------------CCHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred HHHHHcCCCEEEEEecCCCccCc-----------------------cHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4556788 888888863211110 13577899999999999999998543
No 251
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=55.37 E-value=4.5 Score=32.27 Aligned_cols=67 Identities=22% Similarity=0.395 Sum_probs=46.9
Q ss_pred cccccccCcccchHHhcccceeEEeecCCCCCcccC--CCC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024 4 DSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPD--LKG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76 (272)
Q Consensus 4 d~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d--l~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~ 76 (272)
++|++.+.+|......+...++..+..++..|-.++ .+. ++.+.+++++ |+++--..+++|++.|++
T Consensus 142 ~kV~vIG~~P~i~~~l~~~~~v~V~d~~p~~g~~p~~~~e~ll~~aD~viiT------GsTlvN~Ti~~lL~~~~~ 211 (270)
T 2h1q_A 142 KKVGVVGHFPHLESLLEPICDLSILEWSPEEGDYPLPASEFILPECDYVYIT------CASVVDKTLPRLLELSRN 211 (270)
T ss_dssp SEEEEESCCTTHHHHHTTTSEEEEEESSCCTTCEEGGGHHHHGGGCSEEEEE------THHHHHTCHHHHHHHTTT
T ss_pred CEEEEECCCHHHHHHHhCCCCEEEEECCCCCCCCChHHHHHHhhcCCEEEEE------eeeeecCCHHHHHHhCcc
Confidence 468889999877776665449999999987553333 221 5888999986 444433449999999964
No 252
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=54.26 E-value=9.8 Score=32.70 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
++++++++++.|++.|+.||+|-++-+.
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 5699999999999999999999887654
No 253
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=53.20 E-value=7.5 Score=32.65 Aligned_cols=73 Identities=23% Similarity=0.254 Sum_probs=40.7
Q ss_pred CCceEEEEe--cCC-CccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC
Q 036024 44 SRTDIIFFC--SPN-NPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120 (272)
Q Consensus 44 ~~~~~i~~~--~p~-nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 120 (272)
-.-+-|+.| .|. ++.- -.+++++|+++|+++|.-+++|=.-. .+..+.-..+++ ++=|.+|
T Consensus 53 ~Gf~~IFTSL~~~e~~~~~---~~~~~~~l~~~a~~~g~~vi~DVsp~---------~~~~Lg~s~~dl----~~f~~lG 116 (385)
T 1x7f_A 53 HGFSRIFTCLLSVNRPKEE---IVAEFKEIINHAKDNNMEVILDVAPA---------VFDQLGISYSDL----SFFAELG 116 (385)
T ss_dssp TTEEEEEEEECCC-----------HHHHHHHHHHHHTTCEEEEEECTT---------CC------CCCT----HHHHHHT
T ss_pred CCCCEEEccCCccCCChHH---HHHHHHHHHHHHHHCCCEEEEECCHH---------HHHHcCCCHHHH----HHHHHcC
Confidence 345667766 342 2222 23789999999999999999997643 233332222222 3446677
Q ss_pred CCccceeEEEec
Q 036024 121 FTGVRLGWTVVP 132 (272)
Q Consensus 121 ~~g~r~G~~~~~ 132 (272)
+.|+|+=+-...
T Consensus 117 i~gLRLD~Gf~~ 128 (385)
T 1x7f_A 117 ADGIRLDVGFDG 128 (385)
T ss_dssp CSEEEESSCCSS
T ss_pred CCEEEEcCCCCH
Confidence 788776553333
No 254
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=51.55 E-value=27 Score=28.80 Aligned_cols=25 Identities=16% Similarity=0.341 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
.+.++++++.|.++|+.+|+|-...
T Consensus 86 l~~ld~~v~~a~~~GiyVIlDlH~~ 110 (345)
T 3jug_A 86 IDTVREVIELAEQNKMVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 4678888888888888888875543
No 255
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=49.71 E-value=6.8 Score=36.68 Aligned_cols=68 Identities=13% Similarity=0.156 Sum_probs=47.7
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCce---EEE--------EecC---CC--ccccCCCHHHHHHHHHHHHHc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTD---IIF--------FCSP---NN--PTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~---~i~--------~~~p---~n--ptG~~~~~~~l~~l~~~~~~~ 77 (272)
+.+..+.++ ++..+.+.++.+|.++++..|... +-- ...| ++ |.|..++.+++++|++-|+++
T Consensus 333 ~Id~mA~~KlN~lh~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~r 412 (858)
T 1c7s_A 333 LLDQMAAYKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQAR 412 (858)
T ss_dssp HHHHHHHTTCCEEEEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCcEEEEEeccCccccccccCCchhhhccccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHc
Confidence 345566778 888888888889998877644311 000 0011 11 456789999999999999999
Q ss_pred CCEEE
Q 036024 78 GSIII 82 (272)
Q Consensus 78 ~~~vi 82 (272)
++.||
T Consensus 413 gI~VI 417 (858)
T 1c7s_A 413 QIEVI 417 (858)
T ss_dssp TCEEE
T ss_pred CCEEE
Confidence 99998
No 256
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=47.19 E-value=14 Score=31.64 Aligned_cols=29 Identities=17% Similarity=0.192 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|+++|+.||+|-++-+..
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 91 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMA 91 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 36999999999999999999998876533
No 257
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=45.91 E-value=14 Score=33.96 Aligned_cols=26 Identities=19% Similarity=0.319 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.++++++++.|++.|+.||.|-++-+
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH 279 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNH 279 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTB
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCc
Confidence 68999999999999999999988764
No 258
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=45.26 E-value=15 Score=23.39 Aligned_cols=21 Identities=19% Similarity=0.134 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCEEEEcccC
Q 036024 67 LEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~ 87 (272)
-++|.++|+++|+.++.|..-
T Consensus 29 A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHH
Confidence 689999999999999999644
No 259
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=44.11 E-value=11 Score=34.73 Aligned_cols=27 Identities=19% Similarity=0.438 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
.++++++++.|++.|+.||.|-++-+.
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt 341 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHV 341 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 489999999999999999999888653
No 260
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=43.53 E-value=19 Score=30.33 Aligned_cols=28 Identities=18% Similarity=0.189 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.++++++++.|+++|+.||.|-++-+.
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~ 94 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHR 94 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcc
Confidence 4699999999999999999999887653
No 261
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=43.02 E-value=7.6 Score=32.47 Aligned_cols=57 Identities=19% Similarity=0.176 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE 133 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~ 133 (272)
.+++++|+++|+++|.-+++|=.-.. +..+.-..+++ ++=|.+|+.|+|+=+-....
T Consensus 49 ~~~~~~l~~~a~~~g~~vi~DIsp~~---------l~~Lg~s~~dl----~~~~~lGi~glRLD~Gf~~~ 105 (372)
T 2p0o_A 49 RQRLTDLGAIAKAEKMKIMVDISGEA---------LKRAGFSFDEL----EPLIELGVTGLRMDYGITIE 105 (372)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECHHH---------HHTTTCBTTBC----HHHHHHTCCEEEECSSCCHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHH---------HHHcCCCHHHH----HHHHHcCCCEEEEcCCCCHH
Confidence 47799999999999999999976432 33332222332 45577888898876544433
No 262
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=42.93 E-value=19 Score=31.06 Aligned_cols=28 Identities=21% Similarity=0.158 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.++++++++.|+++|+.||+|-++-+.
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 106 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMNHK 106 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 3699999999999999999999888654
No 263
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=42.81 E-value=25 Score=29.96 Aligned_cols=27 Identities=11% Similarity=0.374 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||+|-++-+
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH 94 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHH 94 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 369999999999999999999987654
No 264
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=42.53 E-value=20 Score=31.03 Aligned_cols=28 Identities=11% Similarity=0.090 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.++++++++.|+++|+.||+|-++-+.
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 104 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLNHK 104 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 4699999999999999999999887653
No 265
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=41.94 E-value=21 Score=30.48 Aligned_cols=27 Identities=22% Similarity=0.330 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||+|-++-+
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH 111 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINH 111 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccc
Confidence 479999999999999999999987754
No 266
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=41.88 E-value=49 Score=28.50 Aligned_cols=25 Identities=12% Similarity=0.316 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccC
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
..+.++++++.|.++|+.+|+|-..
T Consensus 70 ~l~~ld~vv~~a~~~Gl~VIlDlH~ 94 (464)
T 1wky_A 70 DIQTVRNLISLAEDNNLVAVLEVHD 94 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecC
Confidence 3578999999999999999998544
No 267
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=41.73 E-value=20 Score=31.29 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.++++++++.|+++|+.||+|-++-+.
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~ 107 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDHK 107 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 4699999999999999999999887654
No 268
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=41.63 E-value=21 Score=30.91 Aligned_cols=28 Identities=29% Similarity=0.264 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.++++++++.|+++|+.||+|-++-+.
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~NH~ 108 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVMNHK 108 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 4699999999999999999999887643
No 269
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=41.21 E-value=21 Score=31.26 Aligned_cols=27 Identities=19% Similarity=0.303 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.+++++|++.|++.|+.||.|-++-+
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NH 104 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNH 104 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccC
Confidence 458999999999999999999988754
No 270
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=39.97 E-value=23 Score=30.55 Aligned_cols=27 Identities=15% Similarity=0.244 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
.++++++++.|+++|+.||+|-++-+.
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~ 123 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHM 123 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccC
Confidence 699999999999999999999887643
No 271
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=39.87 E-value=6.1 Score=31.06 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=46.2
Q ss_pred cccccccCcccchHHhcccceeEEeecCCCC---CcccC-CC--CCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024 4 DSSVIVGQAGDLEDEVGKYCNIEYLECGPGN---NFFPD-LK--GTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77 (272)
Q Consensus 4 d~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~d-l~--~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~ 77 (272)
++|++.+.||++...++...++..+..+++. +-.+| .+ .++...+++++ |+++--..+++|++.|++.
T Consensus 117 ~kV~vIG~~p~l~~~l~~~~~v~V~d~~p~~~~~~~~~~~~e~~~l~~~D~v~iT------GsTlvN~Ti~~lL~~~~~~ 190 (249)
T 3npg_A 117 KRIAIIGNMPPVVRTLKEKYEVYVFERNMKLWDRDTYSDTLEYHILPEVDGIIAS------ASCIVNGTLDMILDRAKKA 190 (249)
T ss_dssp SEEEEESCCHHHHHHHTTTSEEEEECCSGGGCCSSEECGGGHHHHGGGCSEEEEE------TTHHHHTCHHHHHHHCSSC
T ss_pred CEEEEECCCHHHHHHHhccCCEEEEECCCcccCCCCCChhHHHhhhccCCEEEEE------eeeeccCCHHHHHHhCccc
Confidence 5789999999977666555788888888762 11122 22 25788899986 3333333489999998653
Q ss_pred C
Q 036024 78 G 78 (272)
Q Consensus 78 ~ 78 (272)
.
T Consensus 191 ~ 191 (249)
T 3npg_A 191 K 191 (249)
T ss_dssp S
T ss_pred C
Confidence 3
No 272
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=39.66 E-value=30 Score=30.30 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|+++|+.||.|-++-+..
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~ 119 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMN 119 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcC
Confidence 36999999999999999999998876543
No 273
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=39.43 E-value=32 Score=29.72 Aligned_cols=27 Identities=30% Similarity=0.386 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|++.|+.||+|-++-+
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH 106 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINH 106 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 369999999999999999999988754
No 274
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=39.22 E-value=20 Score=30.94 Aligned_cols=27 Identities=11% Similarity=0.229 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
.++++++++.|+++|+.||+|-++-+.
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~ 100 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAVINHM 100 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 689999999999999999999887643
No 275
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=39.15 E-value=30 Score=29.73 Aligned_cols=27 Identities=26% Similarity=0.505 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||+|-++-+
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH 121 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNH 121 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 369999999999999999999987754
No 276
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=39.05 E-value=26 Score=29.70 Aligned_cols=27 Identities=15% Similarity=0.257 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
.+++++|++.|+++|+.||.|-++-+.
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~NH~ 107 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTPNYR 107 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCcC
Confidence 689999999999999999999988653
No 277
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=38.71 E-value=21 Score=23.23 Aligned_cols=21 Identities=14% Similarity=0.131 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCEEEEcccC
Q 036024 67 LEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~ 87 (272)
-.+|.++|+++|+.++.|..-
T Consensus 29 A~~I~e~A~e~gVPi~e~~~L 49 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKL 49 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEECHHH
Confidence 689999999999999999643
No 278
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=37.77 E-value=26 Score=29.88 Aligned_cols=27 Identities=22% Similarity=0.363 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|++.|+.||+|-+.-+
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH 108 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNH 108 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 569999999999999999999987653
No 279
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=36.90 E-value=34 Score=30.48 Aligned_cols=29 Identities=14% Similarity=0.382 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|++.|+.||.|-++-+..
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 46999999999999999999998876543
No 280
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=36.73 E-value=68 Score=26.53 Aligned_cols=55 Identities=13% Similarity=0.192 Sum_probs=37.9
Q ss_pred hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCC---HHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAAT---QNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~---~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
...++..| +.+.+|+... .+.+ .+|.|. +. .+.++++++.|.++|+.+|+|-.+.
T Consensus 68 i~~i~~~G~N~vRipi~w~-~~~~----------------~~~~~~-~~~~~l~~~~~vv~~a~~~Gi~vildlH~~ 126 (376)
T 3ayr_A 68 FKVLIDNQFNVFRIPTTWS-GHFG----------------EAPDYK-IDEKWLKRVHEVVDYPYKNGAFVILNLHHE 126 (376)
T ss_dssp HHHHHHTTCCEEEECCCCT-TSBC----------------CTTTCC-BCHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHHcCCCEEEEeeECh-hhcC----------------CCCCCc-cCHHHHHHHHHHHHHHHHCCCEEEEECCCc
Confidence 45567788 9999998765 2221 112222 22 3568999999999999999997664
No 281
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=36.66 E-value=21 Score=34.20 Aligned_cols=26 Identities=19% Similarity=0.319 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.++++++++.|++.|+-||.|-+|-+
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NH 586 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNH 586 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccc
Confidence 58999999999999999999988854
No 282
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=36.47 E-value=34 Score=29.50 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|+++|+.||+|-++-+..
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVPDHMG 124 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCcC
Confidence 36999999999999999999998876543
No 283
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=35.77 E-value=21 Score=23.47 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCEEEEcccC
Q 036024 67 LEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~ 87 (272)
-++|.++|+++|+.++.|..-
T Consensus 44 A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCeEEECHHH
Confidence 589999999999999999654
No 284
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=35.71 E-value=29 Score=29.33 Aligned_cols=29 Identities=17% Similarity=0.305 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|+++|+.||+|-++-+..
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTT 101 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 46999999999999999999998886543
No 285
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=35.20 E-value=41 Score=29.91 Aligned_cols=30 Identities=17% Similarity=0.449 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 62 ATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 62 ~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
=+.++++++++.|++.|+.||.|-++-+..
T Consensus 216 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 216 GDKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CCHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 357999999999999999999998876543
No 286
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=34.56 E-value=22 Score=23.37 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCEEEEcccC
Q 036024 67 LEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~ 87 (272)
-.+|.++|+++|+.++.|..-
T Consensus 29 A~~I~e~A~e~gVPi~e~~~L 49 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIKL 49 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCeecCHHH
Confidence 689999999999999999654
No 287
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=34.53 E-value=40 Score=29.97 Aligned_cols=28 Identities=25% Similarity=0.377 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.++++++++.|++.|+.||.|-++-+.
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~ 245 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHA 245 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcC
Confidence 4799999999999999999999877543
No 288
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=33.72 E-value=31 Score=29.77 Aligned_cols=26 Identities=12% Similarity=0.391 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.++++++++.|+++|+.||.|-++-+
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH 127 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNH 127 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 58999999999999999999987754
No 289
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=33.20 E-value=41 Score=29.64 Aligned_cols=28 Identities=14% Similarity=0.265 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.+++++|++.|+++|+.||+|-++-+.
T Consensus 78 t~~df~~Lv~~aH~~Gi~VilD~V~NHt 105 (557)
T 1zja_A 78 TMEDFDRLMAELKKRGMRLMVDVVINHS 105 (557)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 3689999999999999999999887543
No 290
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=32.68 E-value=34 Score=30.60 Aligned_cols=28 Identities=25% Similarity=0.386 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.++++++++.|+++|+.||+|-++-+.
T Consensus 207 t~~dfk~Lv~~aH~~GI~VilD~V~NH~ 234 (599)
T 3bc9_A 207 TKGELENAIDALHNNDIKVYFDAVLNHR 234 (599)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCC
Confidence 4699999999999999999999887653
No 291
>1x0p_A Hypothetical protein TLL0078; BLUF, FAD, structural genomics, electron transport; HET: FAD; 2.00A {Thermosynechococcus elongatus} SCOP: d.58.10.2
Probab=32.49 E-value=36 Score=24.03 Aligned_cols=82 Identities=12% Similarity=0.230 Sum_probs=47.3
Q ss_pred ceEEEEecCCCccccCCCHHHHHHHHHHHHHc-------CCEEEEcccCCccccCCCCCCcc----ccCCCC--Cce--E
Q 036024 46 TDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-------GSIIIFDSAYAAYVTDGCPRSIY----EIPGAR--EVA--I 110 (272)
Q Consensus 46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-------~~~vi~D~~~~~~~~~~~~~~~~----~~~~~~--~~~--i 110 (272)
.+++|++...-+ ++.+++.+|++.|+++ |++++.+..+.... .|....+. .+..++ .++ +
T Consensus 4 ~~l~Y~S~~~~~----~~~~~l~~Il~~a~~~N~~~~ITG~Ll~~~g~F~Q~L-EG~~~~V~~l~~rI~~D~RH~~v~~l 78 (143)
T 1x0p_A 4 HRLIYLSCATDG----LSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTL-EGDRQKVSETYARILKDPRHHSAEIV 78 (143)
T ss_dssp EEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEE-EEEHHHHHHHHHHHHTCTTEEEEEEE
T ss_pred EEEEEEEeeCCC----CCHHHHHHHHHHHHHhhhhcCCEEEEEEcCCEEEEEe-cCCHHHHHHHHHHHhcCCCcCCeEEE
Confidence 467888865443 3468999999999875 46777776665433 33222222 222122 222 3
Q ss_pred EEecCccccCCCccceeEEEecc
Q 036024 111 EISSFSKFSGFTGVRLGWTVVPE 133 (272)
Q Consensus 111 ~~~s~sK~~g~~g~r~G~~~~~~ 133 (272)
..+...+-. +++|.+|++-..+
T Consensus 79 ~~~~i~~R~-F~~W~M~~~~~~~ 100 (143)
T 1x0p_A 79 EFKAIEERT-FINWSMRLVQLGE 100 (143)
T ss_dssp EEEECSSCS-SCSCSCCEEEGGG
T ss_pred Eeeeccccc-cCCCcceeecccc
Confidence 333334433 5789999877666
No 292
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=32.44 E-value=77 Score=26.71 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024 62 ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93 (272)
Q Consensus 62 ~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~ 93 (272)
.+.+.+.++++.|+++|+.|++|=.|++...+
T Consensus 86 ~d~~~~~~~a~~Ak~~GLkVlldfHysD~Wad 117 (399)
T 1ur4_A 86 NDLEKAIQIGKRATANGMKLLADFHYSDFWAD 117 (399)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSSSSCCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeccCCccCC
Confidence 57888999999999999999999877765433
No 293
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=32.36 E-value=30 Score=17.05 Aligned_cols=19 Identities=26% Similarity=0.326 Sum_probs=15.6
Q ss_pred CHHHHHHHHHHHHHcCCEE
Q 036024 63 TQNQLEQLVEFARNNGSII 81 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~v 81 (272)
++++++++-+-+++.++.+
T Consensus 13 tpeelkklkeeakkanirv 31 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRV 31 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHhccEEE
Confidence 5789999999998887654
No 294
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=32.18 E-value=44 Score=29.58 Aligned_cols=27 Identities=15% Similarity=0.245 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|++.|+.||+|-++-+
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V~NH 117 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVVINH 117 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 469999999999999999999988754
No 295
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=31.98 E-value=27 Score=32.87 Aligned_cols=26 Identities=27% Similarity=0.406 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.++++++++.|+++|+-||.|-++-+
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH 394 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNH 394 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeecc
Confidence 58999999999999999999988854
No 296
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=31.87 E-value=45 Score=29.79 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||+|-++-+
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~NH 223 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVLSH 223 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECCcc
Confidence 468999999999999999999988754
No 297
>2hfn_A Synechocystis photoreceptor (SLR1694); beta sheet ferredoxin-like fold, flavin binding protein, electron transport; HET: FMN; 1.80A {Synechocystis SP} PDB: 2hfo_A* 3mzi_A*
Probab=31.33 E-value=39 Score=24.21 Aligned_cols=81 Identities=15% Similarity=0.184 Sum_probs=47.1
Q ss_pred ceEEEEecCCCccccCCCHHHHHHHHHHHHHc-------CCEEEEcccCCccccCCCCCCcc----ccCCCC--Cce--E
Q 036024 46 TDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-------GSIIIFDSAYAAYVTDGCPRSIY----EIPGAR--EVA--I 110 (272)
Q Consensus 46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-------~~~vi~D~~~~~~~~~~~~~~~~----~~~~~~--~~~--i 110 (272)
.+++|++...-+ ++++++.+|++.|+++ |++++.+..+.... +|....+. .+..++ .++ +
T Consensus 7 ~~liY~S~a~~~----~~~~~l~~Il~~a~~~N~~~gITG~Ll~~~g~F~Q~L-EG~~~~V~~l~~rI~~D~RH~~v~~l 81 (153)
T 2hfn_A 7 YRLIYSSQGIPN----LQPQDLKDILESSQRNNPANGITGLLCYSKPAFLQVL-EGECEQVNETYHRIVQDERHHSPQII 81 (153)
T ss_dssp EEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEE-EEEHHHHHHHHHHHHTCTTEEEEEEE
T ss_pred EEEEEEEeecCC----CCHHHHHHHHHHHHHhhhhcCcEEEEEEeCCEEEEEe-eCCHHHHHHHHHHHhcCCCcCCeEEE
Confidence 467888865544 4568999999999875 46777776665433 33222222 222122 222 3
Q ss_pred EEecCccccCCCccceeEEEec
Q 036024 111 EISSFSKFSGFTGVRLGWTVVP 132 (272)
Q Consensus 111 ~~~s~sK~~g~~g~r~G~~~~~ 132 (272)
..+...+-. +++|.+|++-..
T Consensus 82 ~~~~i~~R~-F~~W~M~~~~~~ 102 (153)
T 2hfn_A 82 ECMPIRRRN-FEVWSMQAITVN 102 (153)
T ss_dssp EEEECSSCS-STTCSCEEEECS
T ss_pred EecccCCCc-cCCCcCeeeccc
Confidence 333333433 578999987766
No 298
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=31.01 E-value=37 Score=30.87 Aligned_cols=26 Identities=27% Similarity=0.355 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.+++++|++.|++.|+.||+|-++-+
T Consensus 111 ~~df~~Lv~~aH~~GIkVilD~V~NH 136 (680)
T 1cyg_A 111 LSDFQRLVDAAHAKGIKVIIDFAPNH 136 (680)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 69999999999999999999977754
No 299
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=31.01 E-value=37 Score=30.91 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.+++++|++.|+++|+.||+|-++-+..
T Consensus 114 t~~dfk~Lv~~aH~~GI~VilD~V~NHts 142 (686)
T 1d3c_A 114 TIADFQNLIAAAHAKNIKVIIDFAPNHTS 142 (686)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCcCccc
Confidence 36999999999999999999998775433
No 300
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=31.00 E-value=37 Score=30.89 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
.+++++|++.|+++|+.||+|-++-+..
T Consensus 116 ~~dfk~Lv~~aH~~GikVilD~V~NHts 143 (683)
T 3bmv_A 116 FTDFQNLINTAHAHNIKVIIDFAPNHTS 143 (683)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcccccc
Confidence 6999999999999999999998875433
No 301
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=30.95 E-value=37 Score=30.90 Aligned_cols=26 Identities=27% Similarity=0.277 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.+++++|++.|+++|+.||+|-++-+
T Consensus 107 ~~df~~Lv~~aH~~GikVilD~V~NH 132 (686)
T 1qho_A 107 WTTFDTLVNDAHQNGIKVIVDFVPNH 132 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTE
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccc
Confidence 69999999999999999999987754
No 302
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=30.92 E-value=47 Score=29.94 Aligned_cols=27 Identities=11% Similarity=0.196 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.+++++|++.|++.|+.||.|-++-+
T Consensus 284 t~~df~~LV~~aH~~GI~VIlD~V~NH 310 (645)
T 4aef_A 284 GDRAFVDLLSELKRFDIKVILDGVFHH 310 (645)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHhhhcCCEEEEEecccc
Confidence 579999999999999999999988754
No 303
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=30.78 E-value=1.1e+02 Score=27.48 Aligned_cols=56 Identities=7% Similarity=-0.004 Sum_probs=38.0
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
+.+..+.++ ++..+.+.+ . +.++..|.. .+.|..++.+++++|++.|+++++.||-
T Consensus 107 ~id~ma~~KlN~lh~Hl~D--~--~ei~~~P~l---------~~~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 107 MIEVLALMGYSTFELYMED--T--YEIENQPYF---------GYFRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp HHHHHHHHTCCEEEEECSS--C--BCCTTCTTT---------TTTTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCcEEEEEeec--c--cccCCCccc---------CccCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 334556677 777777753 2 333333332 2335678999999999999999999983
No 304
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=30.76 E-value=31 Score=28.06 Aligned_cols=24 Identities=29% Similarity=0.419 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccC
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
.+.++++++.|.++|+.+|+|-..
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~H~ 127 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDWHI 127 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 478999999999999999998643
No 305
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=30.58 E-value=49 Score=29.19 Aligned_cols=27 Identities=11% Similarity=0.183 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|++.|+.||+|-++-+
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH 103 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMKLMMDLVVNH 103 (558)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 468999999999999999999987754
No 306
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=30.21 E-value=37 Score=29.96 Aligned_cols=27 Identities=22% Similarity=0.374 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||+|-++-+
T Consensus 77 t~~d~~~lv~~~h~~Gi~vilD~V~NH 103 (555)
T 2ze0_A 77 TMDDFDELLAQAHRRGLKVILDLVINH 103 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 368999999999999999999977754
No 307
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=29.89 E-value=35 Score=27.27 Aligned_cols=25 Identities=20% Similarity=0.211 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
.+.++++++.|.++|+.+|+|-...
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H~~ 103 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWHIL 103 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccc
Confidence 4779999999999999999986654
No 308
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=29.57 E-value=39 Score=26.74 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHcCCEEEEcccCC
Q 036024 65 NQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 65 ~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
+.++++++.|.++|+.+|+|-...
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~h~~ 102 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDFHSH 102 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC
Confidence 678999999999999999986543
No 309
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=29.53 E-value=52 Score=29.30 Aligned_cols=28 Identities=21% Similarity=0.146 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.++++++++.|+++|+.||+|-++-+.
T Consensus 86 t~~df~~lv~~~h~~Gi~VilD~V~NH~ 113 (589)
T 3aj7_A 86 TNEDCFALIEKTHKLGMKFITDLVINHC 113 (589)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 4689999999999999999999887643
No 310
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=29.50 E-value=42 Score=29.66 Aligned_cols=29 Identities=24% Similarity=0.329 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
++++++++++.|+++|+.||.|-++-+..
T Consensus 166 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 194 (558)
T 3vgf_A 166 GPEGFRKLVDEAHKKGLGVILDVVYNHVG 194 (558)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEeecccc
Confidence 46899999999999999999999886544
No 311
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=29.11 E-value=63 Score=29.02 Aligned_cols=29 Identities=14% Similarity=0.352 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|+++|+.||.|-++-...
T Consensus 201 ~~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 229 (618)
T 3m07_A 201 TPDDFKAFIDAAHGYGLSVVLDIVLNHFG 229 (618)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeecCccCC
Confidence 57999999999999999999999987644
No 312
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=29.10 E-value=60 Score=29.09 Aligned_cols=29 Identities=17% Similarity=0.348 Sum_probs=25.8
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 62 ATQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 62 ~~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
-+.++++++++.|++.|+.||.|-++-+.
T Consensus 202 Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~ 230 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAAGLNVILDWVPGHF 230 (617)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 34799999999999999999999888764
No 313
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=28.68 E-value=50 Score=30.10 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.+++++|++.|++.|+.||+|-++-+
T Consensus 310 t~~df~~Lv~~aH~~GikVilD~V~NH 336 (696)
T 4aee_A 310 TMEDFEKLVQVLHSRKIKIVLDITMHH 336 (696)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccc
Confidence 479999999999999999999988754
No 314
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=28.64 E-value=51 Score=28.94 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|++.|+.||+|-++-+
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH 103 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLVVNH 103 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 368999999999999999999987654
No 315
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=28.48 E-value=41 Score=27.76 Aligned_cols=23 Identities=17% Similarity=0.171 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHcCCEEEEcccC
Q 036024 65 NQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 65 ~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
+.++++++.|+++|+.+|+|-..
T Consensus 90 ~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 90 DLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 67999999999999999999776
No 316
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=27.74 E-value=63 Score=28.87 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|++.|+.||.|-++-+..
T Consensus 191 t~~d~~~lv~~~H~~Gi~VilD~V~NH~~ 219 (602)
T 2bhu_A 191 RPEDLMALVDAAHRLGLGVFLDVVYNHFG 219 (602)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 47999999999999999999999887543
No 317
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=27.42 E-value=70 Score=24.13 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=24.5
Q ss_pred eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 47 DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 47 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
.++++--..|+.|.... +.++.++|++|++.++.
T Consensus 161 a~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 161 AGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp BEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred eEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 33433333578898877 77788888999998874
No 318
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=27.37 E-value=44 Score=26.47 Aligned_cols=23 Identities=9% Similarity=0.150 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHcCCEEEEcccC
Q 036024 65 NQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 65 ~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
+.+++++++|+++|+.||+|-..
T Consensus 90 ~~~d~~~~~a~~~Gi~vil~~~~ 112 (351)
T 3vup_A 90 DDMKDLLDTAKKYNILVFPCLWN 112 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEecc
Confidence 56899999999999999988643
No 319
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=27.24 E-value=48 Score=29.95 Aligned_cols=28 Identities=18% Similarity=0.165 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAY 90 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~ 90 (272)
+.++++++++.|+++|+.||+|-++-+.
T Consensus 154 t~~df~~Lv~~aH~~GI~VilD~V~NH~ 181 (644)
T 3czg_A 154 SNDDLVALTSRLREAGISLCADFVLNHT 181 (644)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 4699999999999999999999887543
No 320
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=27.06 E-value=48 Score=29.81 Aligned_cols=27 Identities=15% Similarity=0.262 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||+|-++-+
T Consensus 161 t~~d~~~Lv~~ah~~GI~VilD~V~NH 187 (628)
T 1g5a_A 161 TIGDLREVIAALHEAGISAVVDFIFNH 187 (628)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 469999999999999999999987754
No 321
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=26.85 E-value=64 Score=29.65 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 61 AATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 61 ~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
.=++++++++++.|+++|+-||.|-++....
T Consensus 309 yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~ 339 (722)
T 3k1d_A 309 FGTPDDFRALVDALHQAGIGVIVDWVPAHFP 339 (722)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECTTCCC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEEEeeccC
Confidence 3457999999999999999999998876543
No 322
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=26.83 E-value=47 Score=26.21 Aligned_cols=23 Identities=22% Similarity=0.197 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHcCCEEEEcccC
Q 036024 65 NQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 65 ~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
+.++++++.|.++|+.+|+|-..
T Consensus 77 ~~ld~~v~~a~~~Gi~vild~h~ 99 (291)
T 1egz_A 77 AKVERVVDAAIANDMYAIIGWHS 99 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEcCC
Confidence 56889999999999999998543
No 323
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=26.55 E-value=46 Score=28.03 Aligned_cols=52 Identities=23% Similarity=0.294 Sum_probs=35.5
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCc--cccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNP--TGHAATQNQLEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~np--tG~~~~~~~l~~l~~~~~~~~~~vi~D~~ 86 (272)
..++..| +.|.+|+... .+.++ +.+| .| ..+.++++++.|+++|+.||+|-.
T Consensus 80 ~~ik~~G~N~VRipi~~~-~~~~~--------------~~~py~~~---~~~~ld~vV~~a~~~Gl~VILDlH 134 (399)
T 3n9k_A 80 KQISNLGLNFVRIPIGYW-AFQLL--------------DNDPYVQG---QVQYLEKALGWARKNNIRVWIDLH 134 (399)
T ss_dssp HHHHHTTCCEEEEEEEGG-GTCCC--------------TTCCCCCC---HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHcCCCEEEEcccHH-HccCC--------------CCCccchh---HHHHHHHHHHHHHHCCCEEEEEec
Confidence 3446788 8888888643 22211 1112 13 357899999999999999999964
No 324
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=25.97 E-value=45 Score=26.60 Aligned_cols=23 Identities=26% Similarity=0.495 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHcCCEEEEcccC
Q 036024 65 NQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 65 ~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
+.++++++.|.++|+.+|+|-..
T Consensus 80 ~~ld~~v~~a~~~Gl~vild~h~ 102 (306)
T 2cks_A 80 DRMHQLIDMATARGLYVIVDWHI 102 (306)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecC
Confidence 67899999999999999999544
No 325
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=25.35 E-value=61 Score=29.11 Aligned_cols=29 Identities=14% Similarity=0.289 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHcC--C--EEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNG--S--IIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~--~--~vi~D~~~~~~~ 91 (272)
+.++++++++.|++.| + .||.|-++-+..
T Consensus 237 t~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~~ 269 (637)
T 1ji1_A 237 DNSTLQTLINDIHSTANGPKGYLILDGVFNHTG 269 (637)
T ss_dssp CHHHHHHHHHHHHCSSSSSCCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHhCCCCccceEEEEECcccCC
Confidence 4699999999999999 9 999999887544
No 326
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=25.26 E-value=50 Score=27.85 Aligned_cols=55 Identities=24% Similarity=0.289 Sum_probs=36.9
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCc--cccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNP--TGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~np--tG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
..++..| +.+.+|+... .+.++ +.+| .| ...+.++++++.|+++|+.+|+|-.+.
T Consensus 80 ~~i~~~G~N~VRipi~~~-~~~~~--------------~~~py~~~--~~l~~ld~vv~~a~~~Gi~VilDlH~~ 137 (408)
T 1h4p_A 80 ANIASQGFNLVRIPIGYW-AFQIL--------------DDDPYVSG--LQESYLDQAIGWARNNSLKVWVDLHGA 137 (408)
T ss_dssp HHHHHTTCCEEEEEEEGG-GTCCC--------------TTCCCCCS--SHHHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHCCCCEEEccCCHH-HcccC--------------CCCCCccc--cHHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3456788 8888888643 22211 1111 12 134789999999999999999997653
No 327
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=25.26 E-value=55 Score=29.93 Aligned_cols=26 Identities=27% Similarity=0.279 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
+.++++++++.|+++|+.||.|-++-
T Consensus 319 t~edfk~LV~~aH~~GI~VilD~V~N 344 (695)
T 3zss_A 319 TLDDFDHFVTEAGKLGLEIALDFALQ 344 (695)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 46999999999999999999998874
No 328
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=24.87 E-value=75 Score=29.37 Aligned_cols=31 Identities=23% Similarity=0.266 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 62 ATQNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 62 ~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
=++++++++++.|++.|+.||.|-++-+...
T Consensus 248 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 278 (755)
T 3aml_A 248 GTPEDLKYLVDKAHSLGLRVLMDVVHSHASN 278 (755)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSCBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecccccc
Confidence 3579999999999999999999999876543
No 329
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=24.76 E-value=52 Score=27.04 Aligned_cols=23 Identities=26% Similarity=0.343 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHcCCEEEEcccC
Q 036024 65 NQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 65 ~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
+.++++++.|.++|+.||+|-..
T Consensus 121 ~~ld~~v~~a~~~Gi~Vild~H~ 143 (359)
T 4hty_A 121 ELLDQVVAWNNELGIYTILDWHS 143 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEEEcCC
Confidence 56799999999999999999543
No 330
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=24.47 E-value=55 Score=29.60 Aligned_cols=29 Identities=10% Similarity=0.211 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
+.++++++++.|++.|+.||.|-++-+..
T Consensus 240 ~~~d~~~lv~~~H~~Gi~VilD~V~NH~~ 268 (657)
T 2wsk_A 240 ALDEFRDAIKALHKAGIEVILDIVLNHSA 268 (657)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 46899999999999999999998886544
No 331
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=29.89 E-value=16 Score=23.43 Aligned_cols=23 Identities=22% Similarity=0.287 Sum_probs=19.4
Q ss_pred HHHHHHHHHHcCCEEEEcccCCc
Q 036024 67 LEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
-++|.++|+++|+.++.|..-..
T Consensus 29 A~~I~e~A~e~~VPi~e~~~LAr 51 (87)
T 3b1s_B 29 AQKIVEIAENYSIPVVRKPELAR 51 (87)
Confidence 57899999999999999976543
No 332
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=23.90 E-value=87 Score=28.84 Aligned_cols=28 Identities=18% Similarity=0.331 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
.++++++++.|++.|+-||.|-++-+..
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 299 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYNHTA 299 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 7999999999999999999998886533
No 333
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=23.90 E-value=80 Score=28.91 Aligned_cols=28 Identities=21% Similarity=0.304 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAYV 91 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~~ 91 (272)
.++++++++.|++.|+.||.|-++-+..
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV~NH~~ 293 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVVYNHTA 293 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 6899999999999999999998886543
No 334
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=23.45 E-value=62 Score=26.51 Aligned_cols=59 Identities=20% Similarity=0.125 Sum_probs=40.2
Q ss_pred hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.+.++..| +.+.+|+... .+.++ ..+ .+-|+++ .+.++++++.|.++|+.+|+|-.+..
T Consensus 49 ~~~i~~~G~N~vRipi~w~-~~~~~--~~~--------g~~~~~~----l~~ld~vV~~a~~~Gi~vIlDlH~~~ 108 (340)
T 3qr3_A 49 QHFVNEDGMTIFRLPVGWQ-YLVNN--NLG--------GNLDSTS----ISKYDQLVQGCLSLGAYCIVDIHNYA 108 (340)
T ss_dssp HHHHHHHCCCEEEEEECHH-HHTTT--CTT--------CCCCHHH----HHHHHHHHHHHHHTTCEEEEEECSTT
T ss_pred HHHHHHCCCCEEEEEeeHH-HhCCC--CCC--------CccCHHH----HHHHHHHHHHHHHCCCEEEEEecCCc
Confidence 45678889 9999999754 22221 000 1123333 36789999999999999999987654
No 335
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=23.08 E-value=64 Score=25.69 Aligned_cols=55 Identities=20% Similarity=0.147 Sum_probs=36.1
Q ss_pred hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCC---HHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAAT---QNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~---~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
...++..| +.+.+|+... .+.+ +.+.|. +. .+.++++++.|.++|+.+|+|-.+.
T Consensus 37 i~~~~~~G~n~vRi~i~w~-~~~~----------------~~~~~~-~~~~~l~~~~~~v~~~~~~gi~vild~h~~ 95 (305)
T 1h1n_A 37 IDTLISKGMNIFRVPFMME-RLVP----------------NSMTGS-PDPNYLADLIATVNAITQKGAYAVVDPHNY 95 (305)
T ss_dssp HHHHHHTTCCEEEEEECHH-HHSC----------------SSTTSC-CCHHHHHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHCCCCEEEecccHH-HcCC----------------CCCCCC-cCHHHHHHHHHHHHHHHHCCCEEEEecccc
Confidence 34556788 8888888643 1111 111222 22 2458999999999999999997665
No 336
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=22.74 E-value=46 Score=22.86 Aligned_cols=22 Identities=18% Similarity=0.273 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCEEEEcccCC
Q 036024 67 LEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
-.+|.++|+++|+.++.|..-.
T Consensus 73 A~~I~~~A~e~~VPi~e~~~LA 94 (123)
T 2jli_A 73 VQTVRKIAEEEGVPILQRIPLA 94 (123)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 6889999999999999996543
No 337
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=22.44 E-value=66 Score=29.07 Aligned_cols=27 Identities=22% Similarity=0.341 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 63 TQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
+.++++++++.|+++|+.||.|-++-+
T Consensus 159 t~~d~~~lv~~~h~~Gi~Vi~D~V~NH 185 (655)
T 3ucq_A 159 TMDDLSALARALRGRGISLVLDLVLNH 185 (655)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeeccc
Confidence 458999999999999999999977654
No 338
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=22.33 E-value=76 Score=24.82 Aligned_cols=34 Identities=6% Similarity=0.094 Sum_probs=28.6
Q ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 56 NPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 56 nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
.-|-.+++.+.+++.++++++||+.+..-..+..
T Consensus 46 ~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E 79 (251)
T 1qwg_A 46 WGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFE 79 (251)
T ss_dssp TTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHH
T ss_pred CceeeecCHHHHHHHHHHHHHcCCeEECCcHHHH
Confidence 3456788989999999999999999998886553
No 339
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=22.26 E-value=63 Score=26.13 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=36.3
Q ss_pred HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
..++..| +.+.+|+... .+.++-. +. .-++++ .+.++++++.|+++|+.+|+|-.+.
T Consensus 35 ~~i~~~G~n~vRi~i~~~-~~~~~~~--~g--------~~~~~~----~~~l~~~v~~a~~~Gi~vildlh~~ 92 (343)
T 1ceo_A 35 ETIAEAGFDHVRLPFDYP-IIESDDN--VG--------EYKEDG----LSYIDRCLEWCKKYNLGLVLDMHHA 92 (343)
T ss_dssp HHHHHHTCCEEEEEEEGG-GTBCSSS--TT--------CBCHHH----HHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHcCCCEEEecCCHH-HhccccC--CC--------cccHHH----HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4556788 8888888644 2222100 00 001221 3568999999999999999997664
No 340
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=22.16 E-value=1e+02 Score=24.29 Aligned_cols=38 Identities=13% Similarity=0.263 Sum_probs=30.2
Q ss_pred CceEEEEecCCCccccCCCHHHHHHHHHHHHHc-CCEEEEcccCCc
Q 036024 45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-GSIIIFDSAYAA 89 (272)
Q Consensus 45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~vi~D~~~~~ 89 (272)
++++|.+ |...+.+.++.+.++.+++ +..+++|-++..
T Consensus 74 ~~daik~-------G~l~s~~~i~~v~~~l~~~~~~~vv~DPv~~~ 112 (282)
T 3h74_A 74 HFDQALI-------GYVGSVALCQQITTYLEQQTLSLLVVDPVLGD 112 (282)
T ss_dssp CCSEEEE-------CCCCSHHHHHHHHHHHHHSCCSEEEECCCCEE
T ss_pred ccCEEEE-------CCCCCHHHHHHHHHHHHHCCCCcEEEcCeeec
Confidence 4556655 7777888899999999887 689999988763
No 341
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=22.15 E-value=77 Score=24.58 Aligned_cols=43 Identities=21% Similarity=0.311 Sum_probs=27.9
Q ss_pred CCceEEEEecCCCc----cccCCCHHH----HHHHHHHHHHcCCEEEEcccC
Q 036024 44 SRTDIIFFCSPNNP----TGHAATQNQ----LEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 44 ~~~~~i~~~~p~np----tG~~~~~~~----l~~l~~~~~~~~~~vi~D~~~ 87 (272)
..+++|-+=.++.+ .| .++..+ .+++.++|+++++.+|+++-+
T Consensus 55 ~Gv~~vqlR~K~~~~~~~~~-~l~~~~~~~~a~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 55 GGVDIIQLRDKGSPGELRFG-PLQARDELAACEILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp TTCSEEEECCTTCHHHHHHC-SCCHHHHHHHHHHHHHHHHHTTCEEEEESCH
T ss_pred CCCCEEEEccCCCCcccccc-CCCHHHHHHHHHHHHHHHHhhCCEEEEeCHH
Confidence 45677777555533 11 123333 377889999999999997654
No 342
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=21.98 E-value=77 Score=25.37 Aligned_cols=25 Identities=16% Similarity=0.339 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCC
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
.+.++++++.|.++|+.+|+|-.+.
T Consensus 81 ~~~~d~~v~~a~~~Gi~vildlh~~ 105 (320)
T 3nco_A 81 LDRVKHVVDVALKNDLVVIINCHHF 105 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 3678999999999999999987654
No 343
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=21.88 E-value=48 Score=23.25 Aligned_cols=22 Identities=23% Similarity=0.164 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCEEEEcccCC
Q 036024 67 LEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
-.+|.++|+++|+.++.|..-.
T Consensus 83 A~~I~e~A~e~gVPi~e~~~LA 104 (137)
T 3bzs_A 83 ALQIIKLAELYDIPVIEDIPLA 104 (137)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 5889999999999999996543
No 344
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=21.81 E-value=56 Score=26.32 Aligned_cols=23 Identities=17% Similarity=0.198 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEccc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~ 86 (272)
.+.++++++.|+++|+.+|+|-.
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~~ 111 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 36799999999999999999864
No 345
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=21.51 E-value=79 Score=29.98 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
.++++++++.|++.|+.||.|-++-+...
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV~NHt~~ 559 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVVYNHTFD 559 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEccccccc
Confidence 58999999999999999999998865443
No 346
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=21.47 E-value=1.9e+02 Score=19.42 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024 179 HSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEIL 229 (272)
Q Consensus 179 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll 229 (272)
++.++.+.+.++++.+.++-. .+++.++ ++..+-+.+.+ ++.+.++..+
T Consensus 52 eqvrkelakeaerl~~efni~v~y~imgs-gsgvm~i~f~g-ddlea~ekal 101 (170)
T 4hhu_A 52 EQVRKELAKEAERLKAEFNINVQYQIMGS-GSGVMVIVFEG-DDLEALEKAL 101 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHTCEEEEEEECT-TCCEEEEEEEC-SCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcceEEEEEEEeC-CceEEEEEEec-CcHHHHHHHH
Confidence 567788888888888877653 5666775 34445566665 3334333333
No 347
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=21.45 E-value=84 Score=25.64 Aligned_cols=60 Identities=12% Similarity=0.120 Sum_probs=40.3
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
....++..| +.+.+|+... .+..+ . ++ .+-|+++ .+.++++++.|.++|+.+|+|-.+..
T Consensus 47 di~~i~~~G~n~vRipi~w~-~~~~~--~-~~-------~~~~~~~----l~~l~~~v~~a~~~Gi~vildlH~~~ 107 (345)
T 3ndz_A 47 MINKIKEAGFNTLRLPVTWD-GHMGA--A-PE-------YTIDQTW----MKRVEEIANYAFDNDMYVIINLHHEN 107 (345)
T ss_dssp HHHHHHHHTCCEEEECCCCT-TSBCC--T-TT-------CCBCHHH----HHHHHHHHHHHHTTTCEEEECCCSCT
T ss_pred HHHHHHHCCCCEEEEeeehH-HhCCC--C-CC-------CccCHHH----HHHHHHHHHHHHHCCCEEEEecCCcc
Confidence 445668889 9999999865 22211 0 00 0112322 36789999999999999999977764
No 348
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=21.37 E-value=1.4e+02 Score=24.46 Aligned_cols=25 Identities=12% Similarity=0.341 Sum_probs=21.7
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccc
Q 036024 62 ATQNQLEQLVEFARNNGSIIIFDSA 86 (272)
Q Consensus 62 ~~~~~l~~l~~~~~~~~~~vi~D~~ 86 (272)
.+.+.+.++++.|++.|+.|++|-.
T Consensus 94 ~~~~~v~~~~~~Ak~~GL~V~l~p~ 118 (343)
T 3civ_A 94 VSDDEIASMAELAHALGLKVCLKPT 118 (343)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEE
Confidence 4789999999999999999988533
No 349
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=21.04 E-value=1.8e+02 Score=24.36 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=34.9
Q ss_pred CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 036024 43 TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDS 85 (272)
Q Consensus 43 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~ 85 (272)
.|....|.+.-...|.|..|+.++++++.+.++++|+.+.+=+
T Consensus 42 ~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~ 84 (386)
T 3bdk_A 42 IPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIE 84 (386)
T ss_dssp STTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 3466777776566778999999999999999999999886543
No 350
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=20.84 E-value=93 Score=25.59 Aligned_cols=58 Identities=12% Similarity=0.048 Sum_probs=41.4
Q ss_pred chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
....++..| +.+.+|+... .+..+ + ..-||++ .+.++++++.|.++|+.+|+|-.+..
T Consensus 57 di~~ik~~G~N~vRipi~w~-~~~~~-----~-------g~~d~~~----l~~ld~vVd~a~~~Gi~vIldlH~~~ 115 (353)
T 3l55_A 57 MMTFLMQNGFNAVRIPVTWY-EHMDA-----E-------GNVDEAW----MMRVKAIVEYAMNAGLYAIVNVHHDT 115 (353)
T ss_dssp HHHHHHHTTEEEEEECCCCG-GGBCT-----T-------CCBCHHH----HHHHHHHHHHHHHHTCEEEEECCTTB
T ss_pred HHHHHHHcCCCEEEEcccHH-HhcCC-----C-------CCcCHHH----HHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 456678899 9999999866 22211 0 1123443 26789999999999999999988764
No 351
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=20.63 E-value=83 Score=28.28 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDSAYAAYVT 92 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~~~ 92 (272)
.++++++++.|++.|+.||.|-++-+...
T Consensus 181 ~~~~~~lv~~~H~~Gi~VilD~V~nH~~~ 209 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDFIPRTAAR 209 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEET
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCCcC
Confidence 58999999999999999999988875443
No 352
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=20.57 E-value=71 Score=25.97 Aligned_cols=65 Identities=17% Similarity=0.169 Sum_probs=37.7
Q ss_pred hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEec-CCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccC
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCS-PNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAY 87 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~ 87 (272)
...++..| +.+.+|+... .+.++- .+. . +.. ..||.-. .-..+.++++++.|.++|+.+|+|-.+
T Consensus 50 ~~~~~~~G~n~vRi~~~~~-~~~~~~--~~~-~---~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 50 LDQIKSLGYNTIRLPYSDD-ILKPGT--MPN-S---INFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp HHHHHHTTCCEEEEEEEGG-GGSTTC--CCC-S---CCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHcCCCEEEeeccHH-HhcCCC--CCc-c---ccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 34556788 8888887643 222110 000 0 000 1344311 013467899999999999999999765
No 353
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=20.49 E-value=85 Score=25.90 Aligned_cols=58 Identities=12% Similarity=0.128 Sum_probs=37.3
Q ss_pred hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024 16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89 (272)
Q Consensus 16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~ 89 (272)
...++..| +.+.+|+... .+.++ ++-. -|+.+ .+.++++++.|+++|+.+|+|-.+..
T Consensus 67 i~~i~~~G~n~vRipv~w~-~~~~~----~~~~-------~~~~~----l~~l~~~v~~a~~~Gi~vild~H~~~ 125 (380)
T 1edg_A 67 IDAIKQKGFNTVRIPVSWH-PHVSG----SDYK-------ISDVW----MNRVQEVVNYCIDNKMYVILNTHHDV 125 (380)
T ss_dssp HHHHHHHTCCEEEECCCCG-GGEET----TTTE-------ECHHH----HHHHHHHHHHHHTTTCEEEEECCSCB
T ss_pred HHHHHHcCCCEEEecccHH-hhcCC----CCCc-------CCHHH----HHHHHHHHHHHHHCCCEEEEeCCCch
Confidence 34556778 8888888654 22211 0000 12222 36789999999999999999977754
No 354
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=20.38 E-value=54 Score=23.23 Aligned_cols=22 Identities=18% Similarity=0.273 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCEEEEcccCC
Q 036024 67 LEQLVEFARNNGSIIIFDSAYA 88 (272)
Q Consensus 67 l~~l~~~~~~~~~~vi~D~~~~ 88 (272)
-.+|.++|+++|+.++.|..-.
T Consensus 82 A~~I~e~A~e~gVPi~e~~~LA 103 (144)
T 2jlj_A 82 VQTVRKIAEEEGVPILQRIPLA 103 (144)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 5889999999999999996543
No 355
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=20.37 E-value=72 Score=25.77 Aligned_cols=22 Identities=14% Similarity=0.297 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEcc
Q 036024 64 QNQLEQLVEFARNNGSIIIFDS 85 (272)
Q Consensus 64 ~~~l~~l~~~~~~~~~~vi~D~ 85 (272)
.+.+++++++|+++|+.+|+|-
T Consensus 90 ~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 90 ISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEc
Confidence 4678999999999999999975
No 356
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=20.06 E-value=1e+02 Score=23.24 Aligned_cols=26 Identities=27% Similarity=0.401 Sum_probs=21.3
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024 55 NNPTGHAATQNQLEQLVEFARNNGSIIIF 83 (272)
Q Consensus 55 ~nptG~~~~~~~l~~l~~~~~~~~~~vi~ 83 (272)
-|+.|.... +.++.++|++|++.++.
T Consensus 169 ~~~dG~mar---~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 169 QKDEGSMAH---TDELRVFADEHGLALIT 194 (206)
T ss_dssp SSSTTSBCC---HHHHHHHHHHHTCEEEE
T ss_pred eCCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 567788877 77888889999999884
Done!