BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036031
(541 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana
GN=At1g04910 PE=1 SV=1
Length = 519
Score = 285 bits (728), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 245/442 (55%), Gaps = 26/442 (5%)
Query: 98 SNSNIVKLWKPPSNRDFVPCVEPSSNYTSPA-EPRGYLLVHTNGGLNQMRAGICDMVAVA 156
S N+ +LW+ + + P P S++ P E GYL V NGGLNQ R+ IC+ V A
Sbjct: 55 SKINVEELWESAKSGGWRPSSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAA 114
Query: 157 RIINATLVVPELDKRSFWQDSSNFSDVFDEDHFINSLANDVKVIKKVPK-ELSTAARAVK 215
RI+NATLV+PELD SFW D S F ++D +HFI +L DVK++ K+P + + +K
Sbjct: 115 RIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIK 174
Query: 216 HFR----SWSGMDYYEGEIASMWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALR 271
F+ + +++Y ++ I RLA + Q+LRCR Y ALR
Sbjct: 175 AFQIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALR 234
Query: 272 FAPQIEAMGKLLVDRMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVEADELRTIRENTVH 331
F P I + + +VD++RS G ++++HLR+E DMLAF+GC +P E LR R+ +
Sbjct: 235 FKPHIMKLSESIVDKLRSQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKE--N 292
Query: 332 WKVKEIDSKEQRSKGYCPLTPKEVGIFLTALGYPSSTPIYIAAGEIYGGDARMADLQTRY 391
+ K + E+R+ G CPLTP+EVG+ L A+ + +ST IY+AAGE++GG+ M +T +
Sbjct: 293 FADKRLIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLF 352
Query: 392 PIMMSKEKLASVEELEPCVNHASQMAALDYIVSVESDVFIPSYSG--NMARAVEGHRRFL 449
P + + + EEL + +A+DY+V + SD+F+P+Y G N A + GHR +
Sbjct: 353 PRLDNHSSVDPSEELS-ATSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYY 411
Query: 450 GHRKTISPDRKALVRLFDKIELGTIREGKSLSNKVIEIHKKRQGSPRKRKGPISGTKGMD 509
G R TI PDRKAL +F E G R G + + + + K G P KR P
Sbjct: 412 GFRTTIRPDRKALAPIFIAREKGK-RAGFEEAVRRVML-KTNFGGPHKRVSP-------- 461
Query: 510 RFRSEEAFYVNPLPDCLCRRQP 531
E+FY N P+C C+ P
Sbjct: 462 -----ESFYTNSWPECFCQMNP 478
>sp|Q7SB74|DOT1_NEUCR Histone-lysine N-methyltransferase, H3 lysine-79 specific
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=dot-1 PE=3 SV=1
Length = 531
Score = 35.8 bits (81), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 390 RYPIMMSKEKLASVEELEPCVNHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHRRFL 449
RY ++ K+K+ +V+++E V Q+AA Y+ E +F+ +G + + V+ R
Sbjct: 228 RYELVEGKDKIDAVKDIEKVV----QLAASTYLTDEEGKIFLDHQTGILRKLVKSKNRSD 283
Query: 450 GHRKTISPDRKALVRLFDKIELGTIREGKSLSN 482
G P KA +R ++ L +R+G + N
Sbjct: 284 G------PGFKAALREYNDEFLKLMRKGVIVRN 310
>sp|Q0URQ5|M28P1_PHANO Probable zinc metalloprotease SNOG_05559 OS=Phaeosphaeria nodorum
(strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=SNOG_05559 PE=3 SV=1
Length = 959
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 15 MLTCAICVIALVALLSVHVHVPVFPSFKVPD 45
TCA+ + ALL+VH+ VP +PS K PD
Sbjct: 16 FFTCAVYIALFAALLTVHLRVPDYPS-KTPD 45
>sp|P33937|NAPA_ECOLI Periplasmic nitrate reductase OS=Escherichia coli (strain K12)
GN=napA PE=1 SV=3
Length = 828
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + +L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B1X8A2|NAPA_ECODH Periplasmic nitrate reductase OS=Escherichia coli (strain K12 /
DH10B) GN=napA PE=3 SV=1
Length = 828
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + +L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|C4ZU48|NAPA_ECOBW Periplasmic nitrate reductase OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=napA PE=3 SV=1
Length = 828
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + +L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|Q31Z29|NAPA_SHIBS Periplasmic nitrate reductase OS=Shigella boydii serotype 4 (strain
Sb227) GN=napA PE=3 SV=1
Length = 828
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + +L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B2TV30|NAPA_SHIB3 Periplasmic nitrate reductase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=napA PE=3 SV=1
Length = 828
Score = 33.5 bits (75), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + +L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|Q32I06|NAPA_SHIDS Periplasmic nitrate reductase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=napA PE=3 SV=1
Length = 828
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|Q1R9L3|NAPA_ECOUT Periplasmic nitrate reductase OS=Escherichia coli (strain UTI89 /
UPEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|A1AD59|NAPA_ECOK1 Periplasmic nitrate reductase OS=Escherichia coli O1:K1 / APEC
GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B7M5P6|NAPA_ECO8A Periplasmic nitrate reductase OS=Escherichia coli O8 (strain IAI1)
GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B7LAM9|NAPA_ECO55 Periplasmic nitrate reductase OS=Escherichia coli (strain 55989 /
EAEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B7MFB8|NAPA_ECO45 Periplasmic nitrate reductase OS=Escherichia coli O45:K1 (strain
S88 / ExPEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|P09515|MCAPS_BWYVG Minor capsid protein P3-RTD (Fragment) OS=Beet western yellows
virus (isolate GB1) GN=ORF3/ORF5 PE=3 SV=2
Length = 673
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 35 VPVFPSFKVPDFADPYKLPTITQQHEIKYQILSTEQSWTEELAPPHLSQTPLPSRKLDVT 94
+P+ ++PDF IT ++ + + +S++ T +L PP L + P P R+L
Sbjct: 494 LPLSVEEEIPDFVGDNPWSNITTENSQEEEAMSSKSGLTPQLKPPGLPK-PQPIRRLKSF 552
Query: 95 GGNSNSNIVKLWKPPSN 111
++ ++V+ W+P N
Sbjct: 553 --DATPDLVEAWRPDVN 567
>sp|B7NN18|NAPA_ECO7I Periplasmic nitrate reductase OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|Q3Z001|NAPA_SHISS Periplasmic nitrate reductase OS=Shigella sonnei (strain Ss046)
GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|Q83QV0|NAPA_SHIFL Periplasmic nitrate reductase OS=Shigella flexneri GN=napA PE=3
SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B7LJU7|NAPA_ESCF3 Periplasmic nitrate reductase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B6I1A4|NAPA_ECOSE Periplasmic nitrate reductase OS=Escherichia coli (strain SE11)
GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B7N5G7|NAPA_ECOLU Periplasmic nitrate reductase OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B1IY66|NAPA_ECOLC Periplasmic nitrate reductase OS=Escherichia coli (strain ATCC 8739
/ DSM 1576 / Crooks) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|Q8CVW4|NAPA_ECOL6 Periplasmic nitrate reductase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|A8A268|NAPA_ECOHS Periplasmic nitrate reductase OS=Escherichia coli O9:H4 (strain HS)
GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B5YWZ7|NAPA_ECO5E Periplasmic nitrate reductase OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|Q8XE47|NAPA_ECO57 Periplasmic nitrate reductase OS=Escherichia coli O157:H7 GN=napA
PE=3 SV=3
Length = 828
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|B1LKV2|NAPA_ECOSM Periplasmic nitrate reductase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPLSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|Q0TFN6|NAPA_ECOL5 Periplasmic nitrate reductase OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKFPLSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
>sp|A7ZP28|NAPA_ECO24 Periplasmic nitrate reductase OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=napA PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 174 WQDSSNFSDVFDEDHFINSLANDVKVIKKVPKELSTA-ARAVKHFRSWSGMDYYEGEIAS 232
W+D NF V D +++LA D+ + + E A A + + W GE S
Sbjct: 498 WRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKS 557
Query: 233 -MWEDYQIIRAAKSDSRLANNNLPLDIQKLRCRACYEALRFAPQI------EAMGKLLVD 285
+W+ Q R K++ + L +LR + YE L P++ E L D
Sbjct: 558 DLWQLVQFSRRFKTEE-VWPEELLAKKPELRGKTLYEVLYATPEVSKYPVSELAEDQLND 616
Query: 286 RMRSYGPYIALHLRYEKDMLAFSGCTHDLSPVE 318
R G Y+ L +E+ G HDL+P +
Sbjct: 617 ESRELGFYLQKGL-FEEYAWFGRGHGHDLAPFD 648
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,968,888
Number of Sequences: 539616
Number of extensions: 8824240
Number of successful extensions: 19550
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 19543
Number of HSP's gapped (non-prelim): 33
length of query: 541
length of database: 191,569,459
effective HSP length: 122
effective length of query: 419
effective length of database: 125,736,307
effective search space: 52683512633
effective search space used: 52683512633
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)