Query 036034
Match_columns 482
No_of_seqs 409 out of 3850
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 08:46:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036034.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036034hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 7.2E-53 1.6E-57 458.6 37.2 467 2-482 233-762 (968)
2 PLN00113 leucine-rich repeat r 100.0 6.8E-39 1.5E-43 349.1 23.4 320 4-323 139-468 (968)
3 KOG4194 Membrane glycoprotein 100.0 2.4E-34 5.2E-39 270.1 3.2 319 2-321 99-430 (873)
4 KOG4194 Membrane glycoprotein 100.0 4.6E-34 9.9E-39 268.2 1.9 306 4-309 124-439 (873)
5 KOG0444 Cytoskeletal regulator 100.0 6.3E-32 1.4E-36 255.9 -6.9 290 3-299 53-352 (1255)
6 KOG0444 Cytoskeletal regulator 100.0 3E-31 6.5E-36 251.3 -2.6 297 1-304 74-380 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 4.8E-30 1E-34 231.2 -9.3 305 4-320 182-541 (565)
8 KOG0472 Leucine-rich repeat pr 99.9 7.1E-29 1.5E-33 223.7 -14.2 314 3-325 66-523 (565)
9 PLN03210 Resistant to P. syrin 99.9 2.7E-22 5.9E-27 219.5 24.7 279 29-317 611-903 (1153)
10 PLN03210 Resistant to P. syrin 99.9 3.3E-22 7.2E-27 218.9 23.0 283 4-297 610-904 (1153)
11 PRK15387 E3 ubiquitin-protein 99.9 8.1E-23 1.8E-27 208.3 16.8 262 6-307 202-466 (788)
12 KOG0618 Serine/threonine phosp 99.9 1.1E-24 2.3E-29 215.8 -7.1 284 6-299 46-420 (1081)
13 KOG4237 Extracellular matrix p 99.9 7.3E-24 1.6E-28 191.2 -3.2 300 6-309 68-487 (498)
14 PRK15387 E3 ubiquitin-protein 99.9 9.9E-21 2.1E-25 193.2 15.7 241 5-282 222-465 (788)
15 KOG0618 Serine/threonine phosp 99.8 4E-23 8.8E-28 204.8 -4.4 283 5-296 219-510 (1081)
16 PRK15370 E3 ubiquitin-protein 99.8 4.6E-20 9.9E-25 189.5 12.3 243 5-275 178-428 (754)
17 PRK15370 E3 ubiquitin-protein 99.8 1.1E-19 2.5E-24 186.6 12.7 244 29-300 178-429 (754)
18 cd00116 LRR_RI Leucine-rich re 99.8 1.7E-21 3.8E-26 185.9 -2.8 277 9-298 2-319 (319)
19 KOG4237 Extracellular matrix p 99.8 1.3E-21 2.9E-26 176.7 -4.2 283 11-298 52-358 (498)
20 cd00116 LRR_RI Leucine-rich re 99.8 4.7E-21 1E-25 182.9 -1.6 274 33-319 2-319 (319)
21 KOG0617 Ras suppressor protein 99.8 8.7E-21 1.9E-25 152.3 -6.2 164 27-213 31-195 (264)
22 KOG0617 Ras suppressor protein 99.7 2.2E-20 4.9E-25 149.9 -4.9 157 50-227 30-186 (264)
23 KOG1187 Serine/threonine prote 99.6 1.3E-15 2.8E-20 145.3 10.1 89 391-482 62-151 (361)
24 PLN03150 hypothetical protein; 99.4 5E-13 1.1E-17 137.2 11.3 111 215-325 419-533 (623)
25 KOG0532 Leucine-rich repeat (L 99.4 2.7E-14 5.8E-19 135.6 -4.1 174 52-251 74-247 (722)
26 KOG0532 Leucine-rich repeat (L 99.3 1.9E-14 4.1E-19 136.6 -5.5 189 4-200 74-270 (722)
27 KOG0595 Serine/threonine-prote 99.3 2.3E-12 5E-17 118.1 7.9 80 402-482 8-88 (429)
28 KOG1909 Ran GTPase-activating 99.3 1.6E-14 3.5E-19 129.4 -5.9 200 71-274 86-310 (382)
29 COG4886 Leucine-rich repeat (L 99.3 2.6E-12 5.7E-17 126.1 7.5 188 33-228 97-291 (394)
30 COG4886 Leucine-rich repeat (L 99.3 2.6E-12 5.5E-17 126.2 6.4 194 9-210 97-297 (394)
31 PLN03150 hypothetical protein; 99.3 1.9E-11 4E-16 125.7 10.9 113 191-303 419-532 (623)
32 KOG0575 Polo-like serine/threo 99.3 1.1E-11 2.3E-16 119.5 8.3 79 404-482 18-97 (592)
33 KOG1026 Nerve growth factor re 99.2 8.4E-12 1.8E-16 124.8 5.9 78 403-482 485-568 (774)
34 KOG4658 Apoptotic ATPase [Sign 99.2 7.2E-12 1.6E-16 131.5 4.1 106 29-135 545-652 (889)
35 KOG0196 Tyrosine kinase, EPH ( 99.2 4.7E-11 1E-15 117.9 9.2 75 405-481 630-708 (996)
36 PF14580 LRR_9: Leucine-rich r 99.2 1.1E-11 2.4E-16 104.5 3.6 106 28-138 18-126 (175)
37 KOG1259 Nischarin, modulator o 99.2 3.3E-12 7.2E-17 112.4 -0.0 133 164-302 282-415 (490)
38 KOG0615 Serine/threonine prote 99.2 5.9E-11 1.3E-15 109.1 7.4 81 402-482 170-255 (475)
39 PF14580 LRR_9: Leucine-rich r 99.2 2.7E-11 5.9E-16 102.1 4.6 123 3-131 17-146 (175)
40 KOG1909 Ran GTPase-activating 99.2 8.3E-13 1.8E-17 118.6 -4.8 242 49-299 26-311 (382)
41 KOG0194 Protein tyrosine kinas 99.2 5E-11 1.1E-15 115.1 6.9 79 404-482 157-240 (474)
42 KOG1259 Nischarin, modulator o 99.2 5E-12 1.1E-16 111.3 0.0 207 20-252 205-413 (490)
43 KOG0197 Tyrosine kinases [Sign 99.2 3.7E-11 8.1E-16 114.3 5.8 75 404-482 206-280 (468)
44 KOG3207 Beta-tubulin folding c 99.2 6.6E-12 1.4E-16 116.0 0.6 151 51-203 119-284 (505)
45 KOG0600 Cdc2-related protein k 99.1 6.8E-11 1.5E-15 111.4 6.8 78 404-482 117-197 (560)
46 KOG3207 Beta-tubulin folding c 99.1 4.8E-12 1.1E-16 116.9 -1.1 202 26-227 118-339 (505)
47 KOG0192 Tyrosine kinase specif 99.1 1E-10 2.2E-15 111.1 7.6 76 406-482 43-119 (362)
48 KOG0580 Serine/threonine prote 99.1 1.7E-11 3.6E-16 104.7 1.9 81 402-482 20-101 (281)
49 KOG4658 Apoptotic ATPase [Sign 99.1 3E-11 6.5E-16 126.9 3.9 105 6-111 546-652 (889)
50 KOG0611 Predicted serine/threo 99.1 2.6E-11 5.6E-16 111.0 2.9 79 404-482 53-132 (668)
51 KOG0597 Serine-threonine prote 99.1 1.2E-10 2.5E-15 111.2 4.3 77 404-481 2-79 (808)
52 KOG0591 NIMA (never in mitosis 99.0 1.8E-11 4E-16 106.8 -1.6 79 403-482 18-99 (375)
53 KOG0531 Protein phosphatase 1, 99.0 2.7E-11 5.9E-16 119.1 -0.7 241 6-277 73-320 (414)
54 KOG1094 Discoidin domain recep 99.0 2.2E-10 4.8E-15 109.7 5.1 76 405-482 539-614 (807)
55 KOG0593 Predicted protein kina 99.0 1.3E-10 2.8E-15 102.7 3.2 77 405-482 3-80 (396)
56 KOG0598 Ribosomal protein S6 k 99.0 4E-10 8.7E-15 102.5 5.7 81 402-482 23-104 (357)
57 KOG0663 Protein kinase PITSLRE 99.0 6.6E-10 1.4E-14 99.6 6.5 81 401-482 73-156 (419)
58 KOG0659 Cdk activating kinase 99.0 4.9E-10 1.1E-14 97.3 5.4 78 404-482 2-80 (318)
59 PF13855 LRR_8: Leucine rich r 99.0 4.1E-10 9E-15 78.1 4.0 57 31-87 3-59 (61)
60 PF13855 LRR_8: Leucine rich r 99.0 3.1E-10 6.7E-15 78.7 3.2 61 5-65 1-61 (61)
61 KOG0531 Protein phosphatase 1, 99.0 4.5E-11 9.7E-16 117.6 -1.9 218 51-299 70-290 (414)
62 KOG0193 Serine/threonine prote 98.9 1.2E-09 2.6E-14 105.3 6.0 84 394-481 382-465 (678)
63 KOG4278 Protein tyrosine kinas 98.9 4E-10 8.6E-15 108.7 2.5 81 397-481 260-341 (1157)
64 KOG0605 NDR and related serine 98.9 1.8E-09 3.9E-14 102.7 6.9 81 402-482 139-220 (550)
65 KOG3653 Transforming growth fa 98.9 4.6E-09 1E-13 98.5 8.9 69 406-481 212-286 (534)
66 cd05626 STKc_LATS2 Catalytic d 98.9 3.3E-09 7.2E-14 103.7 8.4 78 405-482 2-80 (381)
67 PTZ00263 protein kinase A cata 98.9 3.9E-09 8.4E-14 101.1 8.4 79 404-482 18-97 (329)
68 cd05599 STKc_NDR_like Catalyti 98.9 4.1E-09 8.9E-14 102.5 8.4 79 404-482 1-80 (364)
69 cd05629 STKc_NDR_like_fungal C 98.9 4E-09 8.8E-14 103.0 8.3 79 404-482 1-80 (377)
70 KOG0585 Ca2+/calmodulin-depend 98.9 4.5E-09 9.8E-14 98.6 7.2 83 400-482 93-189 (576)
71 KOG0032 Ca2+/calmodulin-depend 98.9 5.9E-09 1.3E-13 100.0 8.3 81 402-482 33-115 (382)
72 cd05625 STKc_LATS1 Catalytic d 98.9 6.3E-09 1.4E-13 101.9 8.4 78 405-482 2-80 (382)
73 cd05612 STKc_PRKX_like Catalyt 98.8 3.6E-09 7.7E-14 99.5 5.8 78 405-482 2-80 (291)
74 cd05600 STKc_Sid2p_Dbf2p Catal 98.8 8.4E-09 1.8E-13 99.0 8.4 79 404-482 1-80 (333)
75 cd05598 STKc_LATS Catalytic do 98.8 8.2E-09 1.8E-13 100.8 8.4 79 404-482 1-80 (376)
76 KOG2052 Activin A type IB rece 98.8 1.7E-08 3.7E-13 94.0 9.7 63 403-472 210-274 (513)
77 KOG0662 Cyclin-dependent kinas 98.8 3.3E-09 7.2E-14 86.6 4.4 76 406-482 4-80 (292)
78 PTZ00426 cAMP-dependent protei 98.8 9.5E-09 2.1E-13 98.7 8.2 80 403-482 29-110 (340)
79 cd05605 STKc_GRK4_like Catalyt 98.8 1E-08 2.2E-13 96.1 7.8 77 406-482 2-79 (285)
80 KOG0582 Ste20-like serine/thre 98.8 1.5E-08 3.2E-13 94.5 8.4 78 403-482 25-103 (516)
81 cd05631 STKc_GRK4 Catalytic do 98.8 1.2E-08 2.5E-13 95.7 8.0 77 406-482 2-79 (285)
82 cd05114 PTKc_Tec_Rlk Catalytic 98.8 1.1E-08 2.4E-13 94.1 7.7 75 404-482 4-78 (256)
83 cd05621 STKc_ROCK2 Catalytic d 98.8 1.1E-08 2.4E-13 99.4 7.9 82 401-482 40-122 (370)
84 cd05596 STKc_ROCK Catalytic do 98.8 9.3E-09 2E-13 100.0 7.2 81 402-482 41-122 (370)
85 KOG0616 cAMP-dependent protein 98.8 7.3E-09 1.6E-13 91.5 5.7 79 404-482 44-123 (355)
86 cd05628 STKc_NDR1 Catalytic do 98.8 1.4E-08 2.9E-13 98.7 8.2 79 404-482 1-80 (363)
87 KOG1095 Protein tyrosine kinas 98.8 8.1E-09 1.8E-13 107.7 6.8 77 404-482 692-774 (1025)
88 KOG1025 Epidermal growth facto 98.8 5.7E-09 1.2E-13 104.1 5.4 68 407-476 699-771 (1177)
89 cd05096 PTKc_DDR1 Catalytic do 98.8 1.6E-08 3.5E-13 95.7 8.4 77 404-482 5-98 (304)
90 cd05064 PTKc_EphR_A10 Catalyti 98.8 1.3E-08 2.8E-13 94.3 7.6 78 403-482 4-85 (266)
91 KOG4236 Serine/threonine prote 98.8 1.1E-08 2.5E-13 97.0 7.1 73 409-482 569-642 (888)
92 cd08228 STKc_Nek6 Catalytic do 98.8 2.2E-08 4.8E-13 92.7 9.1 79 404-482 2-81 (267)
93 PRK13184 pknD serine/threonine 98.8 2.1E-08 4.6E-13 105.1 9.6 79 404-482 2-81 (932)
94 cd05597 STKc_DMPK_like Catalyt 98.8 1.6E-08 3.6E-13 96.8 8.2 79 404-482 1-80 (331)
95 cd05105 PTKc_PDGFR_alpha Catal 98.8 1.4E-08 3E-13 99.5 7.6 79 402-482 35-120 (400)
96 cd07871 STKc_PCTAIRE3 Catalyti 98.8 2.2E-08 4.8E-13 93.9 8.7 77 404-482 5-82 (288)
97 KOG0577 Serine/threonine prote 98.8 3.3E-09 7.2E-14 101.9 3.1 77 406-482 28-105 (948)
98 cd07869 STKc_PFTAIRE1 Catalyti 98.8 2.3E-08 5E-13 94.6 8.8 78 403-482 4-82 (303)
99 cd05104 PTKc_Kit Catalytic dom 98.8 1.2E-08 2.5E-13 99.6 7.0 81 400-482 31-118 (375)
100 COG5238 RNA1 Ran GTPase-activa 98.8 2.3E-10 5E-15 99.5 -4.4 177 28-204 29-256 (388)
101 cd05622 STKc_ROCK1 Catalytic d 98.8 1.8E-08 3.8E-13 98.1 8.0 86 397-482 36-122 (371)
102 PLN00034 mitogen-activated pro 98.8 2E-08 4.3E-13 97.2 8.2 77 404-482 74-151 (353)
103 cd05571 STKc_PKB Catalytic dom 98.8 2.3E-08 4.9E-13 95.5 8.5 73 410-482 1-74 (323)
104 KOG0661 MAPK related serine/th 98.8 2.2E-09 4.8E-14 100.6 1.2 78 403-482 9-89 (538)
105 cd06650 PKc_MEK1 Catalytic dom 98.8 3E-08 6.6E-13 95.0 9.1 77 404-482 5-82 (333)
106 PHA02988 hypothetical protein; 98.7 2.7E-08 5.8E-13 93.1 8.4 72 410-482 26-101 (283)
107 cd05595 STKc_PKB_beta Catalyti 98.7 2.8E-08 6.1E-13 94.9 8.3 73 410-482 1-74 (323)
108 cd05573 STKc_ROCK_NDR_like Cat 98.7 1.6E-08 3.5E-13 97.7 6.8 79 404-482 1-80 (350)
109 cd07872 STKc_PCTAIRE2 Catalyti 98.7 4E-08 8.6E-13 93.3 9.1 77 404-482 6-83 (309)
110 cd06649 PKc_MEK2 Catalytic dom 98.7 4.4E-08 9.6E-13 93.9 9.3 77 404-482 5-82 (331)
111 KOG0586 Serine/threonine prote 98.7 3E-08 6.5E-13 96.2 7.9 82 400-482 52-134 (596)
112 cd05585 STKc_YPK1_like Catalyt 98.7 3E-08 6.5E-13 94.2 8.0 71 412-482 1-72 (312)
113 cd05068 PTKc_Frk_like Catalyti 98.7 3E-08 6.5E-13 91.5 7.8 76 403-482 5-80 (261)
114 cd08224 STKc_Nek6_Nek7 Catalyt 98.7 4E-08 8.6E-13 91.0 8.7 79 404-482 2-81 (267)
115 cd05113 PTKc_Btk_Bmx Catalytic 98.7 2.6E-08 5.6E-13 91.7 7.3 75 404-482 4-78 (256)
116 cd07848 STKc_CDKL5 Catalytic d 98.7 2.7E-08 5.8E-13 93.3 7.5 77 405-482 2-79 (287)
117 cd08229 STKc_Nek7 Catalytic do 98.7 2.5E-08 5.3E-13 92.4 7.2 79 404-482 2-81 (267)
118 cd05593 STKc_PKB_gamma Catalyt 98.7 3.9E-08 8.5E-13 94.1 8.7 73 410-482 1-74 (328)
119 cd05601 STKc_CRIK Catalytic do 98.7 3.2E-08 7E-13 94.8 8.1 79 404-482 1-80 (330)
120 cd05627 STKc_NDR2 Catalytic do 98.7 3.3E-08 7.1E-13 95.9 8.2 78 405-482 2-80 (360)
121 cd06607 STKc_TAO Catalytic dom 98.7 5.4E-08 1.2E-12 92.2 9.3 79 404-482 15-94 (307)
122 cd05624 STKc_MRCK_beta Catalyt 98.7 3.5E-08 7.5E-13 94.6 8.1 79 404-482 1-80 (331)
123 cd05632 STKc_GRK5 Catalytic do 98.7 5.2E-08 1.1E-12 91.3 8.6 77 406-482 2-79 (285)
124 cd06624 STKc_ASK Catalytic dom 98.7 4.2E-08 9.1E-13 91.0 7.9 80 400-482 4-84 (268)
125 cd05589 STKc_PKN Catalytic dom 98.7 4.7E-08 1E-12 93.4 8.3 77 406-482 1-81 (324)
126 cd05072 PTKc_Lyn Catalytic dom 98.7 3.7E-08 8E-13 90.9 7.4 76 403-482 5-80 (261)
127 PF07714 Pkinase_Tyr: Protein 98.7 3.1E-08 6.7E-13 91.4 6.7 73 408-482 3-80 (259)
128 KOG0583 Serine/threonine prote 98.7 4.4E-08 9.5E-13 94.1 7.9 82 401-482 14-99 (370)
129 KOG0594 Protein kinase PCTAIRE 98.7 3.1E-08 6.8E-13 90.2 6.4 79 403-482 10-96 (323)
130 KOG0658 Glycogen synthase kina 98.7 3.9E-08 8.5E-13 89.6 6.9 64 405-475 25-89 (364)
131 cd05580 STKc_PKA Catalytic dom 98.7 5.5E-08 1.2E-12 91.4 8.4 78 405-482 2-80 (290)
132 cd06619 PKc_MKK5 Catalytic dom 98.7 7.5E-08 1.6E-12 89.9 9.2 76 405-482 2-78 (279)
133 cd05107 PTKc_PDGFR_beta Cataly 98.7 3.9E-08 8.5E-13 96.3 7.5 82 399-482 32-120 (401)
134 cd06631 STKc_YSK4 Catalytic do 98.7 6.6E-08 1.4E-12 89.5 8.6 78 405-482 1-81 (265)
135 cd05033 PTKc_EphR Catalytic do 98.7 5.8E-08 1.3E-12 89.9 8.2 77 404-482 4-84 (266)
136 cd05588 STKc_aPKC Catalytic do 98.7 6.2E-08 1.3E-12 92.8 8.6 73 410-482 1-75 (329)
137 KOG0199 ACK and related non-re 98.7 1.3E-08 2.8E-13 99.8 3.8 74 406-482 112-189 (1039)
138 cd06615 PKc_MEK Catalytic doma 98.7 8E-08 1.7E-12 91.1 9.2 76 405-482 2-78 (308)
139 PHA03212 serine/threonine kina 98.7 5.9E-08 1.3E-12 95.0 8.5 70 404-482 92-162 (391)
140 cd05630 STKc_GRK6 Catalytic do 98.7 7.6E-08 1.6E-12 90.2 8.8 77 406-482 2-79 (285)
141 cd05106 PTKc_CSF-1R Catalytic 98.7 4.2E-08 9E-13 95.6 7.2 80 401-482 35-121 (374)
142 cd05594 STKc_PKB_alpha Catalyt 98.7 7.3E-08 1.6E-12 92.1 8.6 73 410-482 1-74 (325)
143 KOG4257 Focal adhesion tyrosin 98.7 4.2E-08 9.2E-13 95.1 6.7 77 403-482 388-469 (974)
144 KOG1035 eIF-2alpha kinase GCN2 98.7 1.1E-08 2.4E-13 106.3 2.9 74 400-475 475-549 (1351)
145 cd07873 STKc_PCTAIRE1 Catalyti 98.7 1E-07 2.2E-12 90.1 9.3 77 404-482 6-83 (301)
146 KOG0581 Mitogen-activated prot 98.7 9.6E-08 2.1E-12 87.3 8.5 75 406-482 81-157 (364)
147 cd07870 STKc_PFTAIRE2 Catalyti 98.7 8.8E-08 1.9E-12 90.0 8.8 79 402-482 3-82 (291)
148 cd07853 STKc_NLK Catalytic dom 98.6 6.1E-08 1.3E-12 94.5 7.9 77 405-482 1-83 (372)
149 cd05608 STKc_GRK1 Catalytic do 98.6 6.2E-08 1.3E-12 90.5 7.6 71 412-482 1-72 (280)
150 cd05102 PTKc_VEGFR3 Catalytic 98.6 2.4E-08 5.2E-13 96.1 4.9 79 402-482 5-91 (338)
151 cd05148 PTKc_Srm_Brk Catalytic 98.6 3.7E-08 8E-13 90.9 5.8 79 401-482 3-81 (261)
152 cd05623 STKc_MRCK_alpha Cataly 98.6 7.5E-08 1.6E-12 92.3 8.0 79 404-482 1-80 (332)
153 cd05034 PTKc_Src_like Catalyti 98.6 9.3E-08 2E-12 88.2 8.1 76 403-482 5-80 (261)
154 cd05090 PTKc_Ror1 Catalytic do 98.6 8.8E-08 1.9E-12 89.6 8.1 77 404-482 5-86 (283)
155 cd05067 PTKc_Lck_Blk Catalytic 98.6 7.8E-08 1.7E-12 88.7 7.6 75 403-482 5-79 (260)
156 cd05618 STKc_aPKC_iota Catalyt 98.6 1.1E-07 2.4E-12 91.0 8.8 73 410-482 1-75 (329)
157 cd06620 PKc_MAPKK_Byr1_like Ca 98.6 9.6E-08 2.1E-12 89.4 8.2 77 404-482 5-82 (284)
158 cd06635 STKc_TAO1 Catalytic do 98.6 1.3E-07 2.9E-12 90.0 9.1 78 405-482 26-104 (317)
159 cd06646 STKc_MAP4K5 Catalytic 98.6 1.5E-07 3.2E-12 87.2 9.1 76 404-482 9-85 (267)
160 KOG4717 Serine/threonine prote 98.6 2.6E-08 5.6E-13 94.4 3.9 79 403-482 17-96 (864)
161 cd05584 STKc_p70S6K Catalytic 98.6 9.5E-08 2.1E-12 91.2 7.9 73 410-482 2-79 (323)
162 cd05085 PTKc_Fer Catalytic dom 98.6 1E-07 2.2E-12 87.3 7.9 70 411-482 2-71 (250)
163 cd05578 STKc_Yank1 Catalytic d 98.6 4.8E-08 1E-12 90.0 5.6 78 405-482 1-79 (258)
164 cd07844 STKc_PCTAIRE_like Cata 98.6 1.3E-07 2.7E-12 88.9 8.6 77 404-482 5-82 (291)
165 cd07861 STKc_CDK1_euk Catalyti 98.6 1.5E-07 3.2E-12 88.1 9.0 77 405-482 1-78 (285)
166 cd05059 PTKc_Tec_like Catalyti 98.6 8.8E-08 1.9E-12 88.2 7.3 75 404-482 4-78 (256)
167 cd05607 STKc_GRK7 Catalytic do 98.6 1.1E-07 2.3E-12 88.8 7.9 71 412-482 1-72 (277)
168 cd05112 PTKc_Itk Catalytic dom 98.6 1.3E-07 2.8E-12 87.0 8.1 75 404-482 4-78 (256)
169 cd06641 STKc_MST3 Catalytic do 98.6 1.7E-07 3.6E-12 87.4 8.7 76 405-482 5-81 (277)
170 cd07846 STKc_CDKL2_3 Catalytic 98.6 6.4E-08 1.4E-12 90.6 6.0 78 404-482 1-79 (286)
171 KOG0694 Serine/threonine prote 98.6 8.7E-08 1.9E-12 94.2 6.8 81 402-482 366-448 (694)
172 cd05570 STKc_PKC Catalytic dom 98.6 1.3E-07 2.8E-12 90.1 8.0 73 410-482 1-75 (318)
173 cd07842 STKc_CDK8_like Catalyt 98.6 1.7E-07 3.8E-12 89.1 8.8 77 406-482 2-83 (316)
174 cd05609 STKc_MAST Catalytic do 98.6 1.6E-07 3.4E-12 88.9 8.5 78 405-482 2-80 (305)
175 cd07836 STKc_Pho85 Catalytic d 98.6 1.6E-07 3.5E-12 87.8 8.4 76 405-482 1-77 (284)
176 cd05066 PTKc_EphR_A Catalytic 98.6 1.2E-07 2.6E-12 87.8 7.5 77 404-482 4-84 (267)
177 cd05591 STKc_nPKC_epsilon Cata 98.6 1.4E-07 3.1E-12 90.0 8.1 73 410-482 1-75 (321)
178 cd05049 PTKc_Trk Catalytic dom 98.6 1E-07 2.2E-12 89.0 6.9 77 404-482 5-87 (280)
179 cd07860 STKc_CDK2_3 Catalytic 98.6 1.1E-07 2.3E-12 89.1 7.1 77 405-482 1-78 (284)
180 cd06625 STKc_MEKK3_like Cataly 98.6 2E-07 4.2E-12 86.2 8.7 79 404-482 2-83 (263)
181 cd05582 STKc_RSK_N N-terminal 98.6 1.8E-07 3.9E-12 89.1 8.6 72 410-482 2-77 (318)
182 cd05050 PTKc_Musk Catalytic do 98.6 1E-07 2.2E-12 89.5 6.7 78 403-482 4-87 (288)
183 cd07859 STKc_TDY_MAPK_plant Ca 98.6 1.5E-07 3.4E-12 90.4 8.2 77 405-482 1-83 (338)
184 cd06632 STKc_MEKK1_plant Catal 98.6 1.9E-07 4.2E-12 85.8 8.4 77 406-482 2-81 (258)
185 cd06629 STKc_MAPKKK_Bck1_like 98.6 1.8E-07 3.8E-12 87.0 8.1 77 406-482 3-87 (272)
186 cd05610 STKc_MASTL Catalytic d 98.6 2.1E-07 4.6E-12 97.3 9.5 80 403-482 3-83 (669)
187 cd05084 PTKc_Fes Catalytic dom 98.6 1.4E-07 3E-12 86.5 7.3 70 411-482 2-72 (252)
188 KOG2120 SCF ubiquitin ligase, 98.6 5.5E-10 1.2E-14 98.5 -8.1 99 54-152 186-296 (419)
189 cd06630 STKc_MEKK1 Catalytic d 98.6 1.5E-07 3.3E-12 87.1 7.6 78 405-482 1-82 (268)
190 cd05603 STKc_SGK2 Catalytic do 98.6 1.9E-07 4E-12 89.2 8.3 73 410-482 1-75 (321)
191 cd05039 PTKc_Csk_like Catalyti 98.6 1.7E-07 3.7E-12 86.2 7.8 75 403-482 5-79 (256)
192 cd05574 STKc_phototropin_like 98.6 2.3E-07 5E-12 88.3 8.9 78 405-482 2-80 (316)
193 cd08529 STKc_FA2-like Catalyti 98.6 2.1E-07 4.6E-12 85.5 8.3 77 405-482 1-78 (256)
194 cd05108 PTKc_EGFR Catalytic do 98.6 1.5E-07 3.3E-12 89.5 7.5 73 404-478 7-84 (316)
195 cd06656 STKc_PAK3 Catalytic do 98.6 2.8E-07 6.2E-12 86.8 9.3 77 403-482 18-95 (297)
196 cd05587 STKc_cPKC Catalytic do 98.6 2.1E-07 4.5E-12 89.0 8.4 78 405-482 1-80 (324)
197 PLN00009 cyclin-dependent kina 98.5 2.4E-07 5.2E-12 87.2 8.5 78 404-482 2-80 (294)
198 cd06610 STKc_OSR1_SPAK Catalyt 98.5 3.3E-07 7.1E-12 84.8 9.3 77 404-482 1-78 (267)
199 cd05590 STKc_nPKC_eta Catalyti 98.5 1.9E-07 4.1E-12 89.0 7.9 73 410-482 1-75 (320)
200 cd05604 STKc_SGK3 Catalytic do 98.5 2.4E-07 5.1E-12 88.6 8.5 73 410-482 1-75 (325)
201 cd05575 STKc_SGK Catalytic dom 98.5 2.5E-07 5.4E-12 88.4 8.6 73 410-482 1-75 (323)
202 cd06633 STKc_TAO3 Catalytic do 98.5 3.5E-07 7.6E-12 86.9 9.6 77 406-482 23-100 (313)
203 cd06611 STKc_SLK_like Catalyti 98.5 2.1E-07 4.6E-12 86.8 8.0 77 403-482 4-81 (280)
204 cd08218 STKc_Nek1 Catalytic do 98.5 2.6E-07 5.6E-12 85.0 8.4 77 405-482 1-78 (256)
205 cd05061 PTKc_InsR Catalytic do 98.5 1.3E-07 2.9E-12 88.6 6.5 79 402-482 4-88 (288)
206 cd08219 STKc_Nek3 Catalytic do 98.5 3.6E-07 7.9E-12 84.0 9.3 76 405-482 1-77 (255)
207 cd07847 STKc_CDKL1_4 Catalytic 98.5 3E-07 6.4E-12 86.1 8.9 77 405-482 2-79 (286)
208 cd05617 STKc_aPKC_zeta Catalyt 98.5 2.5E-07 5.4E-12 88.5 8.4 73 410-482 1-75 (327)
209 cd07841 STKc_CDK7 Catalytic do 98.5 2.3E-07 5E-12 87.5 8.0 77 406-482 2-81 (298)
210 cd05065 PTKc_EphR_B Catalytic 98.5 2E-07 4.4E-12 86.4 7.5 77 404-482 4-84 (269)
211 KOG0592 3-phosphoinositide-dep 98.5 6.5E-08 1.4E-12 92.5 4.0 83 400-482 69-153 (604)
212 cd07843 STKc_CDC2L1 Catalytic 98.5 2.4E-07 5.2E-12 87.1 8.0 79 403-482 4-85 (293)
213 cd05619 STKc_nPKC_theta Cataly 98.5 2.7E-07 5.9E-12 87.8 8.3 73 410-482 1-75 (316)
214 cd08227 PK_STRAD_alpha Pseudok 98.5 3E-07 6.4E-12 88.0 8.6 73 409-482 3-78 (327)
215 PF00069 Pkinase: Protein kina 98.5 2.2E-07 4.7E-12 85.6 7.4 76 406-482 1-77 (260)
216 cd05592 STKc_nPKC_theta_delta 98.5 2.7E-07 5.9E-12 87.8 8.3 73 410-482 1-75 (316)
217 cd07864 STKc_CDK12 Catalytic d 98.5 2.6E-07 5.5E-12 87.3 8.1 75 401-476 4-79 (302)
218 KOG0607 MAP kinase-interacting 98.5 6E-08 1.3E-12 86.7 3.4 80 395-482 74-155 (463)
219 cd07856 STKc_Sty1_Hog1 Catalyt 98.5 2.2E-07 4.8E-12 88.9 7.7 83 399-482 5-89 (328)
220 cd05616 STKc_cPKC_beta Catalyt 98.5 2.9E-07 6.3E-12 87.9 8.4 78 405-482 1-80 (323)
221 cd05052 PTKc_Abl Catalytic dom 98.5 2.1E-07 4.6E-12 86.0 7.3 75 404-482 6-81 (263)
222 cd05070 PTKc_Fyn_Yrk Catalytic 98.5 2.2E-07 4.8E-12 85.7 7.3 74 404-482 6-79 (260)
223 cd05062 PTKc_IGF-1R Catalytic 98.5 1.5E-07 3.3E-12 87.7 6.3 79 402-482 4-88 (277)
224 cd06617 PKc_MKK3_6 Catalytic d 98.5 3.7E-07 8E-12 85.3 8.9 76 405-482 2-79 (283)
225 cd05071 PTKc_Src Catalytic dom 98.5 2.2E-07 4.8E-12 85.8 7.2 74 404-482 6-79 (262)
226 cd05073 PTKc_Hck Catalytic dom 98.5 2.2E-07 4.9E-12 85.7 7.2 75 403-482 5-79 (260)
227 cd07876 STKc_JNK2 Catalytic do 98.5 3.1E-07 6.8E-12 89.1 8.6 80 402-482 19-105 (359)
228 cd06652 STKc_MEKK2 Catalytic d 98.5 4E-07 8.6E-12 84.2 8.9 79 404-482 2-85 (265)
229 cd05087 PTKc_Aatyk1_Aatyk3 Cat 98.5 2.4E-07 5.1E-12 86.0 7.3 70 411-482 2-74 (269)
230 cd06622 PKc_MAPKK_PBS2_like Ca 98.5 1.7E-07 3.8E-12 87.7 6.5 76 405-482 2-78 (286)
231 KOG0198 MEKK and related serin 98.5 1.9E-07 4.2E-12 86.3 6.5 70 404-476 17-87 (313)
232 cd06640 STKc_MST4 Catalytic do 98.5 3.3E-07 7.2E-12 85.4 8.3 77 404-482 4-81 (277)
233 KOG0574 STE20-like serine/thre 98.5 1.9E-08 4.2E-13 88.9 -0.1 74 404-482 33-107 (502)
234 cd08221 STKc_Nek9 Catalytic do 98.5 4.2E-07 9E-12 83.6 8.8 77 405-482 1-78 (256)
235 cd05615 STKc_cPKC_alpha Cataly 98.5 2.9E-07 6.3E-12 87.9 8.0 78 405-482 1-80 (323)
236 cd05051 PTKc_DDR Catalytic dom 98.5 2.6E-07 5.7E-12 86.9 7.5 78 403-482 4-98 (296)
237 cd06637 STKc_TNIK Catalytic do 98.5 2.5E-07 5.4E-12 85.9 7.2 78 401-482 3-88 (272)
238 KOG2982 Uncharacterized conser 98.5 8.6E-09 1.9E-13 91.1 -2.4 205 28-246 70-287 (418)
239 cd05097 PTKc_DDR_like Catalyti 98.5 2E-07 4.3E-12 87.8 6.6 77 404-482 5-96 (295)
240 KOG0201 Serine/threonine prote 98.5 5E-08 1.1E-12 90.9 2.3 76 405-482 14-90 (467)
241 cd06628 STKc_MAPKKK_Byr2_like 98.5 4.7E-07 1E-11 83.8 9.0 77 406-482 2-85 (267)
242 cd07832 STKc_CCRK Catalytic do 98.5 4.6E-07 1E-11 84.8 9.0 77 405-482 1-78 (286)
243 cd05043 PTK_Ryk Pseudokinase d 98.5 2.9E-07 6.3E-12 85.9 7.6 77 403-481 5-87 (280)
244 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.5 2.2E-07 4.8E-12 86.4 6.7 69 411-482 2-95 (274)
245 cd05103 PTKc_VEGFR2 Catalytic 98.5 1.8E-07 4E-12 90.1 6.3 78 403-482 6-91 (343)
246 cd06645 STKc_MAP4K3 Catalytic 98.5 3.9E-07 8.5E-12 84.4 8.3 76 404-482 9-85 (267)
247 cd06626 STKc_MEKK4 Catalytic d 98.5 4.6E-07 9.9E-12 83.7 8.7 76 406-482 2-78 (264)
248 cd06644 STKc_STK10_LOK Catalyt 98.5 4.7E-07 1E-11 85.1 8.9 76 404-482 12-88 (292)
249 cd06654 STKc_PAK1 Catalytic do 98.5 5.8E-07 1.2E-11 84.7 9.4 76 404-482 20-96 (296)
250 cd05055 PTKc_PDGFR Catalytic d 98.5 3.4E-07 7.3E-12 86.6 7.8 78 403-482 34-118 (302)
251 cd06642 STKc_STK25-YSK1 Cataly 98.5 1.7E-07 3.7E-12 87.4 5.7 76 405-482 5-81 (277)
252 cd07840 STKc_CDK9_like Catalyt 98.5 4.1E-07 8.9E-12 85.1 8.4 76 406-482 1-79 (287)
253 cd06609 STKc_MST3_like Catalyt 98.5 4.3E-07 9.3E-12 84.5 8.3 76 405-482 2-78 (274)
254 cd06612 STKc_MST1_2 Catalytic 98.5 3.5E-07 7.6E-12 84.1 7.6 74 404-482 3-77 (256)
255 cd05577 STKc_GRK Catalytic dom 98.5 3.9E-07 8.5E-12 84.9 8.0 71 412-482 1-72 (277)
256 cd05088 PTKc_Tie2 Catalytic do 98.5 3.4E-07 7.4E-12 86.6 7.7 77 404-482 7-87 (303)
257 cd06638 STKc_myosinIIIA Cataly 98.5 1.6E-07 3.5E-12 87.9 5.5 84 395-482 9-99 (286)
258 cd05046 PTK_CCK4 Pseudokinase 98.5 2.9E-07 6.3E-12 85.6 7.2 77 404-482 5-87 (275)
259 cd07879 STKc_p38delta_MAPK13 C 98.5 4.1E-07 8.9E-12 87.6 8.3 71 404-475 15-86 (342)
260 cd05091 PTKc_Ror2 Catalytic do 98.5 2.6E-07 5.6E-12 86.4 6.8 77 404-482 5-87 (283)
261 cd06613 STKc_MAP4K3_like Catal 98.5 6.5E-07 1.4E-11 82.5 9.4 76 404-482 3-79 (262)
262 PTZ00036 glycogen synthase kin 98.5 4.1E-07 8.8E-12 90.6 8.5 65 403-474 65-130 (440)
263 PHA03211 serine/threonine kina 98.5 3.8E-07 8.2E-12 90.7 8.2 70 404-482 169-239 (461)
264 cd06634 STKc_TAO2 Catalytic do 98.5 4.8E-07 1E-11 85.8 8.6 79 404-482 15-94 (308)
265 cd07833 STKc_CDKL Catalytic do 98.5 2.9E-07 6.4E-12 86.2 7.1 77 405-482 2-79 (288)
266 cd05036 PTKc_ALK_LTK Catalytic 98.5 2.9E-07 6.2E-12 85.8 7.0 78 403-482 5-88 (277)
267 KOG2982 Uncharacterized conser 98.5 2E-08 4.4E-13 88.8 -0.8 229 28-270 44-287 (418)
268 cd05048 PTKc_Ror Catalytic Dom 98.5 3.2E-07 6.9E-12 85.8 7.3 77 404-482 5-87 (283)
269 cd05045 PTKc_RET Catalytic dom 98.5 3.7E-07 7.9E-12 85.7 7.7 76 405-482 1-82 (290)
270 cd05095 PTKc_DDR2 Catalytic do 98.5 3E-07 6.4E-12 86.7 7.1 77 404-482 5-98 (296)
271 cd05038 PTKc_Jak_rpt2 Catalyti 98.5 4.8E-07 1E-11 84.5 8.4 77 404-482 4-87 (284)
272 cd06651 STKc_MEKK3 Catalytic d 98.5 7.4E-07 1.6E-11 82.5 9.5 78 405-482 3-85 (266)
273 cd06643 STKc_SLK Catalytic dom 98.5 5.5E-07 1.2E-11 84.2 8.6 74 406-482 7-81 (282)
274 cd07877 STKc_p38alpha_MAPK14 C 98.5 5.9E-07 1.3E-11 86.6 9.1 80 395-475 8-88 (345)
275 cd05063 PTKc_EphR_A2 Catalytic 98.5 4.1E-07 9E-12 84.3 7.7 77 404-482 5-85 (268)
276 cd06621 PKc_MAPKK_Pek1_like Ca 98.5 6.2E-07 1.3E-11 84.1 9.0 76 405-482 2-80 (287)
277 cd06616 PKc_MKK4 Catalytic dom 98.5 4.2E-07 9.2E-12 85.2 7.7 76 405-482 5-82 (288)
278 cd05098 PTKc_FGFR1 Catalytic d 98.5 4.7E-07 1E-11 85.8 7.9 77 404-482 18-103 (307)
279 cd05041 PTKc_Fes_like Catalyti 98.5 4.6E-07 9.9E-12 83.1 7.6 71 410-482 1-71 (251)
280 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 98.5 5.5E-07 1.2E-11 84.3 8.2 76 404-482 4-86 (284)
281 cd06655 STKc_PAK2 Catalytic do 98.5 6.3E-07 1.4E-11 84.4 8.7 76 404-482 19-95 (296)
282 PTZ00266 NIMA-related protein 98.5 3.9E-07 8.4E-12 96.3 7.8 82 400-482 9-93 (1021)
283 cd07835 STKc_CDK1_like Catalyt 98.5 4.4E-07 9.6E-12 84.8 7.6 76 406-482 1-77 (283)
284 cd08220 STKc_Nek8 Catalytic do 98.4 7.7E-07 1.7E-11 81.8 9.0 77 405-482 1-78 (256)
285 PRK09188 serine/threonine prot 98.4 4.7E-07 1E-11 86.3 7.7 81 399-482 13-97 (365)
286 cd06605 PKc_MAPKK Catalytic do 98.4 4.2E-07 9.1E-12 84.0 7.3 76 405-482 2-78 (265)
287 cd05620 STKc_nPKC_delta Cataly 98.4 5.8E-07 1.2E-11 85.5 8.3 73 410-482 1-75 (316)
288 cd05069 PTKc_Yes Catalytic dom 98.4 4.8E-07 1E-11 83.4 7.6 74 404-482 6-79 (260)
289 cd07874 STKc_JNK3 Catalytic do 98.4 6.9E-07 1.5E-11 86.5 9.0 80 402-482 15-101 (355)
290 cd05581 STKc_PDK1 Catalytic do 98.4 2.2E-07 4.8E-12 86.6 5.4 79 404-482 1-81 (280)
291 cd06639 STKc_myosinIIIB Cataly 98.4 3.7E-07 8E-12 85.8 6.8 84 395-482 13-103 (291)
292 PTZ00267 NIMA-related protein 98.4 6.2E-07 1.3E-11 90.3 8.8 75 405-482 68-144 (478)
293 cd08225 STKc_Nek5 Catalytic do 98.4 4.1E-07 8.9E-12 83.6 6.9 77 405-482 1-78 (257)
294 cd07878 STKc_p38beta_MAPK11 Ca 98.4 3.9E-07 8.5E-12 87.8 6.9 72 402-474 13-85 (343)
295 cd06653 STKc_MEKK3_like_1 Cata 98.4 1E-06 2.2E-11 81.5 9.3 79 404-482 2-85 (264)
296 cd05042 PTKc_Aatyk Catalytic d 98.4 5.6E-07 1.2E-11 83.5 7.6 70 411-482 2-74 (269)
297 cd07845 STKc_CDK10 Catalytic d 98.4 7.5E-07 1.6E-11 84.5 8.6 79 403-482 6-87 (309)
298 cd05602 STKc_SGK1 Catalytic do 98.4 6.7E-07 1.5E-11 85.5 8.3 73 410-482 1-75 (325)
299 cd05093 PTKc_TrkB Catalytic do 98.4 6.4E-07 1.4E-11 84.0 8.0 76 404-482 5-86 (288)
300 cd07880 STKc_p38gamma_MAPK12 C 98.4 6.7E-07 1.5E-11 86.1 8.4 74 402-476 13-87 (343)
301 cd05572 STKc_cGK_PKG Catalytic 98.4 6.9E-07 1.5E-11 82.5 8.1 71 412-482 1-72 (262)
302 cd05614 STKc_MSK2_N N-terminal 98.4 6.6E-07 1.4E-11 85.8 8.2 78 405-482 1-84 (332)
303 cd07868 STKc_CDK8 Catalytic do 98.4 7.2E-07 1.6E-11 84.9 8.4 69 409-482 6-79 (317)
304 cd07862 STKc_CDK6 Catalytic do 98.4 8.2E-07 1.8E-11 83.4 8.6 77 405-482 2-88 (290)
305 cd06647 STKc_PAK_I Catalytic d 98.4 6.9E-07 1.5E-11 84.0 8.1 76 404-482 19-95 (293)
306 cd06623 PKc_MAPKK_plant_like C 98.4 9.2E-07 2E-11 81.6 8.8 76 405-482 2-78 (264)
307 cd07865 STKc_CDK9 Catalytic do 98.4 8.1E-07 1.8E-11 84.2 8.6 74 402-476 10-84 (310)
308 KOG0666 Cyclin C-dependent kin 98.4 9E-08 2E-12 85.3 1.7 81 401-482 21-107 (438)
309 cd05035 PTKc_Axl_like Catalyti 98.4 6.4E-07 1.4E-11 83.2 7.6 71 406-477 1-75 (273)
310 cd07875 STKc_JNK1 Catalytic do 98.4 7.6E-07 1.7E-11 86.6 8.4 80 402-482 22-108 (364)
311 KOG1859 Leucine-rich repeat pr 98.4 4.3E-09 9.3E-14 103.6 -7.2 119 55-178 166-291 (1096)
312 cd05032 PTKc_InsR_like Catalyt 98.4 5.9E-07 1.3E-11 83.6 7.3 77 404-482 6-88 (277)
313 cd05053 PTKc_FGFR Catalytic do 98.4 4.6E-07 9.9E-12 85.2 6.5 81 400-482 8-95 (293)
314 PHA03209 serine/threonine kina 98.4 5.1E-07 1.1E-11 87.5 7.0 71 403-482 65-136 (357)
315 cd05086 PTKc_Aatyk2 Catalytic 98.4 4.7E-07 1E-11 83.9 6.4 70 411-482 2-74 (268)
316 cd07839 STKc_CDK5 Catalytic do 98.4 3.4E-07 7.4E-12 85.6 5.4 76 406-482 2-78 (284)
317 KOG0610 Putative serine/threon 98.4 4.5E-07 9.8E-12 84.0 5.9 79 404-482 77-156 (459)
318 KOG4250 TANK binding protein k 98.4 1.1E-07 2.3E-12 93.9 2.0 68 406-475 15-83 (732)
319 cd06606 STKc_MAPKKK Catalytic 98.4 1.2E-06 2.7E-11 80.4 9.0 77 405-482 1-80 (260)
320 KOG0033 Ca2+/calmodulin-depend 98.4 7.4E-09 1.6E-13 89.0 -5.3 78 404-482 11-89 (355)
321 KOG1859 Leucine-rich repeat pr 98.4 5.5E-09 1.2E-13 102.8 -7.0 172 94-274 102-291 (1096)
322 cd06627 STKc_Cdc7_like Catalyt 98.4 1.6E-06 3.5E-11 79.5 9.5 77 405-482 1-78 (254)
323 cd06614 STKc_PAK Catalytic dom 98.4 1.1E-06 2.5E-11 82.2 8.6 77 402-482 17-94 (286)
324 cd07837 STKc_CdkB_plant Cataly 98.4 9.8E-07 2.1E-11 83.0 8.2 77 405-482 2-85 (295)
325 KOG4721 Serine/threonine prote 98.4 1.4E-07 3E-12 90.7 2.3 63 409-482 129-191 (904)
326 cd06917 STKc_NAK1_like Catalyt 98.4 9.2E-07 2E-11 82.4 7.9 76 405-482 2-81 (277)
327 cd07867 STKc_CDC2L6 Catalytic 98.4 1E-06 2.2E-11 83.9 8.3 69 409-482 6-79 (317)
328 cd05101 PTKc_FGFR2 Catalytic d 98.4 7.4E-07 1.6E-11 84.3 7.3 78 403-482 14-100 (304)
329 cd05040 PTKc_Ack_like Catalyti 98.4 7.6E-07 1.7E-11 81.9 7.2 70 410-482 1-74 (257)
330 cd06608 STKc_myosinIII_like Ca 98.4 7.3E-07 1.6E-11 82.8 7.1 78 401-482 3-88 (275)
331 cd05116 PTKc_Syk Catalytic dom 98.4 9E-07 2E-11 81.5 7.5 70 411-482 2-74 (257)
332 cd05057 PTKc_EGFR_like Catalyt 98.4 1.2E-06 2.6E-11 81.8 8.3 76 404-482 7-87 (279)
333 KOG2120 SCF ubiquitin ligase, 98.4 4.5E-09 9.8E-14 92.9 -7.4 170 125-296 185-373 (419)
334 cd05089 PTKc_Tie1 Catalytic do 98.4 8.4E-07 1.8E-11 83.6 7.3 77 404-482 2-82 (297)
335 cd05077 PTK_Jak1_rpt1 Pseudoki 98.4 9.6E-07 2.1E-11 81.6 7.5 69 411-482 2-83 (262)
336 cd05079 PTKc_Jak1_rpt2 Catalyt 98.4 1.1E-06 2.4E-11 82.2 7.9 76 405-482 5-87 (284)
337 smart00219 TyrKc Tyrosine kina 98.4 1.1E-06 2.5E-11 80.6 7.9 74 407-482 2-80 (258)
338 cd08528 STKc_Nek10 Catalytic d 98.4 1.2E-06 2.7E-11 81.1 8.1 78 405-482 1-88 (269)
339 KOG0667 Dual-specificity tyros 98.4 6.3E-07 1.4E-11 87.9 6.3 74 405-482 187-267 (586)
340 cd07849 STKc_ERK1_2_like Catal 98.4 1E-06 2.2E-11 84.7 7.6 78 403-482 4-87 (336)
341 cd08226 PK_STRAD_beta Pseudoki 98.4 1.3E-06 2.8E-11 83.6 8.4 71 411-482 5-78 (328)
342 PHA03207 serine/threonine kina 98.4 1.2E-06 2.6E-11 86.0 8.2 71 404-482 92-165 (392)
343 cd06618 PKc_MKK7 Catalytic dom 98.4 1.1E-06 2.3E-11 82.8 7.6 78 403-482 14-93 (296)
344 cd05579 STKc_MAST_like Catalyt 98.3 7.2E-07 1.6E-11 82.3 6.2 71 412-482 1-72 (265)
345 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.3 1.7E-06 3.6E-11 81.0 8.6 75 406-482 6-87 (283)
346 KOG0660 Mitogen-activated prot 98.3 8.2E-07 1.8E-11 81.0 6.2 78 404-482 22-105 (359)
347 cd05094 PTKc_TrkC Catalytic do 98.3 1.3E-06 2.8E-11 82.1 7.9 76 404-482 5-86 (291)
348 PTZ00024 cyclin-dependent prot 98.3 1.3E-06 2.8E-11 83.9 8.0 75 408-482 13-99 (335)
349 cd00192 PTKc Catalytic domain 98.3 1.3E-06 2.8E-11 80.4 7.6 71 410-482 1-75 (262)
350 cd05074 PTKc_Tyro3 Catalytic d 98.3 1.1E-06 2.5E-11 81.5 7.3 69 406-475 1-73 (273)
351 cd05099 PTKc_FGFR4 Catalytic d 98.3 9.4E-07 2E-11 84.0 6.8 78 403-482 11-97 (314)
352 cd05092 PTKc_TrkA Catalytic do 98.3 1.4E-06 3.1E-11 81.3 7.8 76 404-482 5-86 (280)
353 cd08217 STKc_Nek2 Catalytic do 98.3 2.3E-06 5.1E-11 78.9 9.2 77 405-482 1-80 (265)
354 cd07863 STKc_CDK4 Catalytic do 98.3 1.6E-06 3.4E-11 81.3 8.1 77 405-482 1-86 (288)
355 cd07852 STKc_MAPK15 Catalytic 98.3 1.2E-06 2.7E-11 84.1 7.5 80 402-482 5-88 (337)
356 cd06636 STKc_MAP4K4_6 Catalyti 98.3 1.1E-06 2.4E-11 82.0 7.1 84 395-482 7-98 (282)
357 PHA03210 serine/threonine kina 98.3 5.7E-07 1.2E-11 91.0 5.3 81 402-482 146-242 (501)
358 cd05056 PTKc_FAK Catalytic dom 98.3 1.3E-06 2.9E-11 80.9 7.3 76 404-482 6-85 (270)
359 cd06659 STKc_PAK6 Catalytic do 98.3 1.1E-06 2.4E-11 82.8 6.9 74 406-482 23-97 (297)
360 cd07850 STKc_JNK Catalytic dom 98.3 2E-06 4.3E-11 83.3 8.8 80 402-482 14-100 (353)
361 KOG1152 Signal transduction se 98.3 4.8E-07 1E-11 87.2 4.1 81 402-482 559-648 (772)
362 cd05586 STKc_Sck1_like Catalyt 98.3 1.6E-06 3.5E-11 83.0 7.9 71 412-482 1-75 (330)
363 cd05100 PTKc_FGFR3 Catalytic d 98.3 1.1E-06 2.4E-11 84.4 6.6 77 404-482 12-97 (334)
364 cd05075 PTKc_Axl Catalytic dom 98.3 1.8E-06 3.8E-11 80.2 7.8 67 407-474 2-71 (272)
365 cd05613 STKc_MSK1_N N-terminal 98.3 1.9E-06 4.1E-11 80.9 8.1 78 405-482 1-84 (290)
366 KOG0589 Serine/threonine prote 98.3 5.9E-07 1.3E-11 85.6 4.4 78 404-482 4-83 (426)
367 cd05044 PTKc_c-ros Catalytic d 98.3 7.4E-07 1.6E-11 82.6 5.1 71 410-482 1-78 (269)
368 KOG4579 Leucine-rich repeat (L 98.3 1.2E-08 2.6E-13 79.7 -5.7 108 7-119 29-140 (177)
369 cd05115 PTKc_Zap-70 Catalytic 98.3 1.6E-06 3.4E-11 79.8 7.1 68 412-482 3-73 (257)
370 KOG0588 Serine/threonine prote 98.3 7.7E-07 1.7E-11 87.3 5.1 79 403-481 11-90 (786)
371 cd07831 STKc_MOK Catalytic dom 98.3 2.2E-06 4.7E-11 80.0 8.1 75 406-482 1-79 (282)
372 cd07866 STKc_BUR1 Catalytic do 98.3 1.3E-06 2.9E-11 82.8 6.7 72 403-475 7-79 (311)
373 cd05122 PKc_STE Catalytic doma 98.3 3.4E-06 7.4E-11 77.1 9.1 75 405-482 1-76 (253)
374 cd08223 STKc_Nek4 Catalytic do 98.3 3E-06 6.5E-11 77.9 8.6 77 405-482 1-79 (257)
375 PTZ00283 serine/threonine prot 98.3 1.5E-06 3.3E-11 87.7 7.1 75 400-475 28-103 (496)
376 cd08530 STKc_CNK2-like Catalyt 98.3 1.6E-06 3.5E-11 79.5 6.8 77 405-482 1-78 (256)
377 cd05054 PTKc_VEGFR Catalytic d 98.3 1.3E-06 2.7E-11 84.0 6.2 78 403-482 6-91 (337)
378 cd05060 PTKc_Syk_like Catalyti 98.3 2.4E-06 5.2E-11 78.6 7.8 70 410-482 1-74 (257)
379 cd08215 STKc_Nek Catalytic dom 98.3 3.7E-06 8E-11 77.1 9.1 77 405-482 1-78 (258)
380 cd05123 STKc_AGC Catalytic dom 98.3 1.5E-06 3.2E-11 79.5 6.2 71 412-482 1-72 (250)
381 cd05083 PTKc_Chk Catalytic dom 98.3 1.9E-06 4E-11 79.2 6.6 72 404-482 6-77 (254)
382 KOG0578 p21-activated serine/t 98.3 6.2E-07 1.3E-11 86.4 3.4 77 403-482 272-349 (550)
383 cd05037 PTK_Jak_rpt1 Pseudokin 98.2 1.9E-06 4.1E-11 79.3 6.6 67 411-482 2-79 (259)
384 cd05058 PTKc_Met_Ron Catalytic 98.2 2.5E-06 5.5E-11 78.7 7.4 71 410-482 1-76 (262)
385 cd07855 STKc_ERK5 Catalytic do 98.2 1.8E-06 3.8E-11 82.9 6.5 78 404-482 5-87 (334)
386 cd07829 STKc_CDK_like Catalyti 98.2 1.2E-06 2.7E-11 81.7 5.3 76 406-482 1-77 (282)
387 KOG0587 Traf2- and Nck-interac 98.2 2.4E-06 5.1E-11 86.5 7.4 83 396-482 11-100 (953)
388 cd06657 STKc_PAK4 Catalytic do 98.2 3.2E-06 6.8E-11 79.5 8.0 70 410-482 26-96 (292)
389 cd07838 STKc_CDK4_6_like Catal 98.2 3.6E-06 7.8E-11 78.7 8.4 76 406-482 1-85 (287)
390 cd06648 STKc_PAK_II Catalytic 98.2 4.7E-06 1E-10 78.0 9.0 75 405-482 20-95 (285)
391 cd06658 STKc_PAK5 Catalytic do 98.2 2E-06 4.4E-11 80.8 6.6 74 406-482 24-98 (292)
392 KOG2345 Serine/threonine prote 98.2 3.7E-07 8E-12 78.9 1.3 76 404-482 21-102 (302)
393 cd07854 STKc_MAPK4_6 Catalytic 98.2 2.2E-06 4.9E-11 82.5 6.9 69 404-475 5-74 (342)
394 cd07858 STKc_TEY_MAPK_plant Ca 98.2 2.1E-06 4.5E-11 82.5 6.7 78 404-482 5-88 (337)
395 cd05110 PTKc_HER4 Catalytic do 98.2 3.1E-06 6.7E-11 80.0 7.7 72 404-477 7-83 (303)
396 KOG4279 Serine/threonine prote 98.2 7.6E-07 1.7E-11 87.7 3.4 69 411-482 582-651 (1226)
397 cd05047 PTKc_Tie Catalytic dom 98.2 3.9E-06 8.5E-11 77.8 7.8 70 411-482 2-75 (270)
398 cd05082 PTKc_Csk Catalytic dom 98.2 3.8E-06 8.1E-11 77.2 7.6 73 404-482 6-79 (256)
399 cd05109 PTKc_HER2 Catalytic do 98.2 4.5E-06 9.7E-11 77.9 8.0 71 404-476 7-82 (279)
400 COG5238 RNA1 Ran GTPase-activa 98.2 1.2E-07 2.6E-12 82.9 -2.4 243 49-300 26-317 (388)
401 cd05111 PTK_HER3 Pseudokinase 98.2 4.9E-06 1.1E-10 77.6 8.1 71 404-476 7-82 (279)
402 cd07834 STKc_MAPK Catalytic do 98.2 2.6E-06 5.7E-11 81.6 6.2 77 405-482 1-83 (330)
403 KOG4579 Leucine-rich repeat (L 98.2 6.5E-08 1.4E-12 75.7 -4.0 111 2-116 50-161 (177)
404 KOG1989 ARK protein kinase fam 98.2 2.9E-06 6.3E-11 86.1 6.3 64 404-470 37-102 (738)
405 cd05583 STKc_MSK_N N-terminal 98.2 3.9E-06 8.5E-11 78.6 7.0 78 405-482 1-84 (288)
406 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.2 1.5E-06 3.3E-11 80.0 3.7 69 411-482 2-78 (258)
407 KOG0596 Dual specificity; seri 98.2 1.5E-06 3.3E-11 83.5 3.7 78 404-482 361-439 (677)
408 cd07830 STKc_MAK_like Catalyti 98.1 2.5E-06 5.5E-11 79.6 5.2 75 406-482 1-77 (283)
409 cd07851 STKc_p38 Catalytic dom 98.1 2.5E-06 5.5E-11 82.2 5.1 80 402-482 13-99 (343)
410 smart00221 STYKc Protein kinas 98.1 9E-06 1.9E-10 72.8 8.3 75 406-482 1-76 (225)
411 PTZ00284 protein kinase; Provi 98.1 3.8E-06 8.2E-11 84.6 6.4 80 399-482 124-211 (467)
412 cd05118 STKc_CMGC Catalytic do 98.1 4.4E-06 9.6E-11 77.9 6.3 76 406-482 1-77 (283)
413 cd05611 STKc_Rim15_like Cataly 98.1 8.8E-06 1.9E-10 74.9 8.1 73 410-482 2-76 (260)
414 cd08222 STKc_Nek11 Catalytic d 98.1 2.9E-06 6.3E-11 78.2 4.2 77 406-482 2-81 (260)
415 KOG0668 Casein kinase II, alph 98.1 1.1E-06 2.4E-11 75.0 1.0 68 403-476 37-106 (338)
416 cd05633 STKc_GRK3 Catalytic do 98.1 1.4E-05 2.9E-10 74.6 8.3 72 411-482 1-76 (279)
417 KOG1006 Mitogen-activated prot 98.1 1.1E-06 2.5E-11 76.7 0.8 71 410-482 70-142 (361)
418 PRK10345 hypothetical protein; 98.0 1.8E-05 3.9E-10 69.7 8.0 64 407-476 5-74 (210)
419 KOG0576 Mitogen-activated prot 98.0 7E-07 1.5E-11 87.6 -1.8 78 402-482 13-91 (829)
420 cd05606 STKc_beta_ARK Catalyti 98.0 2E-05 4.3E-10 73.5 8.0 72 411-482 1-76 (278)
421 PF12799 LRR_4: Leucine Rich r 98.0 4.6E-06 1E-10 52.8 2.4 16 25-40 20-35 (44)
422 KOG0690 Serine/threonine prote 98.0 3.4E-06 7.3E-11 75.9 2.3 80 403-482 167-247 (516)
423 PLN03224 probable serine/threo 98.0 9.8E-06 2.1E-10 80.9 5.9 81 402-482 143-264 (507)
424 PF12799 LRR_4: Leucine Rich r 98.0 5.7E-06 1.2E-10 52.4 2.7 12 76-87 23-34 (44)
425 KOG0200 Fibroblast/platelet-de 98.0 8.7E-06 1.9E-10 84.1 5.7 78 402-481 294-380 (609)
426 KOG0579 Ste20-like serine/thre 98.0 7.6E-07 1.6E-11 86.8 -2.1 74 405-481 33-107 (1187)
427 cd08216 PK_STRAD Pseudokinase 98.0 1.6E-05 3.5E-10 75.5 6.8 72 409-482 7-78 (314)
428 cd07857 STKc_MPK1 Catalytic do 98.0 2.7E-05 5.9E-10 74.6 8.3 69 405-474 1-73 (332)
429 PRK15386 type III secretion pr 97.9 3.2E-05 7E-10 73.7 8.4 15 28-42 51-65 (426)
430 PRK15386 type III secretion pr 97.9 3.7E-05 8.1E-10 73.3 8.6 54 52-111 51-104 (426)
431 cd05147 RIO1_euk RIO kinase fa 97.9 1.4E-05 3E-10 69.6 5.1 60 409-468 2-84 (190)
432 KOG1644 U2-associated snRNP A' 97.9 2.3E-05 4.9E-10 66.0 6.0 83 54-138 43-126 (233)
433 KOG0612 Rho-associated, coiled 97.9 1.7E-06 3.6E-11 89.9 -1.1 86 397-482 68-154 (1317)
434 KOG0986 G protein-coupled rece 97.9 3.5E-06 7.6E-11 79.2 0.9 80 403-482 184-264 (591)
435 KOG1644 U2-associated snRNP A' 97.9 3.1E-05 6.7E-10 65.2 6.3 123 8-134 22-149 (233)
436 KOG4645 MAPKKK (MAP kinase kin 97.8 2.7E-06 5.7E-11 89.7 -0.8 78 403-481 1234-1312(1509)
437 cd00180 PKc Catalytic domain o 97.8 8.9E-05 1.9E-09 65.3 8.5 69 412-482 1-70 (215)
438 PHA03390 pk1 serine/threonine- 97.8 9.7E-05 2.1E-09 68.4 8.8 79 396-482 6-88 (267)
439 PRK10359 lipopolysaccharide co 97.8 6E-05 1.3E-09 66.8 6.6 84 391-475 16-107 (232)
440 KOG0584 Serine/threonine prote 97.7 1.3E-05 2.8E-10 78.4 2.1 75 407-481 43-119 (632)
441 PF13306 LRR_5: Leucine rich r 97.7 0.00012 2.7E-09 59.2 7.3 105 24-133 7-111 (129)
442 cd05145 RIO1_like RIO kinase f 97.7 0.00011 2.3E-09 64.2 7.2 71 410-482 3-96 (190)
443 KOG1024 Receptor-like protein 97.6 5.8E-05 1.3E-09 69.9 4.6 78 397-476 277-360 (563)
444 KOG3665 ZYG-1-like serine/thre 97.6 1.3E-05 2.9E-10 82.8 -0.1 108 5-114 122-233 (699)
445 smart00220 S_TKc Serine/Threon 97.6 0.00015 3.2E-09 65.7 6.7 65 416-482 1-66 (244)
446 KOG3665 ZYG-1-like serine/thre 97.6 2E-05 4.3E-10 81.5 1.0 127 53-181 122-265 (699)
447 KOG0669 Cyclin T-dependent kin 97.6 1.3E-06 2.8E-11 75.8 -6.6 70 404-474 17-87 (376)
448 PRK14879 serine/threonine prot 97.6 0.00016 3.5E-09 64.2 6.5 72 410-482 2-78 (211)
449 KOG0599 Phosphorylase kinase g 97.5 6.1E-05 1.3E-09 66.4 2.9 83 400-482 13-102 (411)
450 KOG1027 Serine/threonine prote 97.5 5.7E-05 1.2E-09 76.5 3.0 69 406-481 511-581 (903)
451 KOG0695 Serine/threonine prote 97.5 3.9E-05 8.5E-10 69.4 1.5 80 402-481 248-329 (593)
452 KOG1151 Tousled-like protein k 97.5 3.1E-05 6.8E-10 72.7 0.8 71 404-474 463-538 (775)
453 PHA02882 putative serine/threo 97.5 0.00043 9.4E-09 65.0 8.6 73 404-476 12-96 (294)
454 KOG2739 Leucine-rich acidic nu 97.5 3.9E-05 8.4E-10 67.5 1.0 112 19-132 33-150 (260)
455 KOG0608 Warts/lats-like serine 97.5 8.8E-05 1.9E-09 72.9 3.4 89 394-482 616-708 (1034)
456 TIGR03724 arch_bud32 Kae1-asso 97.5 0.00031 6.7E-09 61.8 6.7 71 411-482 1-76 (199)
457 KOG2123 Uncharacterized conser 97.4 4.6E-06 9.9E-11 73.5 -5.5 83 4-90 18-101 (388)
458 PRK09605 bifunctional UGMP fam 97.4 0.00031 6.7E-09 71.9 6.8 79 403-482 332-415 (535)
459 KOG1167 Serine/threonine prote 97.3 0.00018 3.9E-09 67.3 3.0 79 399-482 31-114 (418)
460 cd05144 RIO2_C RIO kinase fami 97.2 0.00078 1.7E-08 59.2 6.3 67 398-464 9-94 (198)
461 KOG0983 Mitogen-activated prot 97.2 0.00032 7E-09 62.0 3.6 71 407-479 95-167 (391)
462 KOG2739 Leucine-rich acidic nu 97.2 0.00019 4.2E-09 63.2 2.0 93 44-138 34-129 (260)
463 KOG0984 Mitogen-activated prot 97.2 0.00034 7.3E-09 59.4 3.3 77 404-482 46-124 (282)
464 KOG1163 Casein kinase (serine/ 97.2 0.00063 1.4E-08 59.2 4.9 75 403-482 14-90 (341)
465 KOG0614 cGMP-dependent protein 97.1 3.1E-05 6.7E-10 74.0 -3.4 79 404-482 420-499 (732)
466 PF13306 LRR_5: Leucine rich r 97.1 0.0014 3E-08 53.0 6.7 120 2-127 9-128 (129)
467 KOG0696 Serine/threonine prote 97.1 8E-05 1.7E-09 69.4 -1.1 80 403-482 348-429 (683)
468 smart00090 RIO RIO-like kinase 97.1 0.0012 2.7E-08 59.5 6.4 59 405-463 29-110 (237)
469 KOG1290 Serine/threonine prote 97.1 0.0011 2.3E-08 63.5 5.9 75 404-482 78-165 (590)
470 cd05576 STKc_RPK118_like Catal 97.1 0.00095 2.1E-08 60.5 5.6 60 415-482 4-64 (237)
471 KOG0664 Nemo-like MAPK-related 97.0 0.00029 6.2E-09 62.2 1.3 66 406-472 55-121 (449)
472 KOG2123 Uncharacterized conser 96.9 2E-05 4.2E-10 69.7 -6.7 100 28-131 18-123 (388)
473 cd05120 APH_ChoK_like Aminogly 96.8 0.0024 5.1E-08 52.9 5.5 68 409-482 3-72 (155)
474 KOG4341 F-box protein containi 96.8 3.1E-05 6.7E-10 72.3 -6.8 267 31-297 140-437 (483)
475 cd05119 RIO RIO kinase family, 96.4 0.008 1.7E-07 52.1 6.5 31 409-439 2-32 (187)
476 COG0515 SPS1 Serine/threonine 96.4 0.013 2.8E-07 55.5 8.5 74 406-481 2-76 (384)
477 KOG1164 Casein kinase (serine/ 96.4 0.0072 1.6E-07 57.6 6.2 75 405-482 19-100 (322)
478 PRK12274 serine/threonine prot 96.2 0.016 3.5E-07 50.5 7.0 63 408-471 6-70 (218)
479 KOG0603 Ribosomal protein S6 k 96.2 0.0031 6.8E-08 62.5 2.9 73 403-482 321-395 (612)
480 PLN03225 Serine/threonine-prot 96.2 0.0058 1.3E-07 62.8 4.8 37 402-438 130-171 (566)
481 KOG0671 LAMMER dual specificit 95.9 0.0027 5.9E-08 59.0 0.8 76 403-482 88-170 (415)
482 PRK04750 ubiB putative ubiquin 95.7 0.016 3.6E-07 58.4 5.5 36 403-439 119-155 (537)
483 PF00560 LRR_1: Leucine Rich R 95.7 0.0055 1.2E-07 32.1 1.1 12 79-90 2-13 (22)
484 PF00560 LRR_1: Leucine Rich R 95.6 0.0064 1.4E-07 31.8 1.1 19 55-74 2-20 (22)
485 KOG1947 Leucine rich repeat pr 95.5 0.00093 2E-08 67.6 -4.3 15 211-225 359-373 (482)
486 KOG0604 MAP kinase-activated p 95.5 0.0039 8.5E-08 56.1 0.1 73 402-482 59-138 (400)
487 KOG1947 Leucine rich repeat pr 95.5 0.00082 1.8E-08 68.0 -4.8 15 163-177 359-373 (482)
488 KOG0670 U4/U6-associated splic 95.4 0.0094 2E-07 57.8 2.3 83 394-482 424-513 (752)
489 KOG4308 LRR-containing protein 95.4 3.5E-05 7.7E-10 76.2 -14.5 61 216-276 235-304 (478)
490 KOG1165 Casein kinase (serine/ 95.1 0.032 7E-07 51.2 4.8 72 405-481 29-102 (449)
491 KOG0195 Integrin-linked kinase 95.1 0.003 6.5E-08 55.9 -1.8 71 409-481 195-265 (448)
492 TIGR01982 UbiB 2-polyprenylphe 95.1 0.027 5.9E-07 55.8 4.6 30 410-439 123-152 (437)
493 PF03109 ABC1: ABC1 family; I 95.0 0.0097 2.1E-07 47.1 1.1 37 402-439 10-46 (119)
494 KOG4308 LRR-containing protein 94.7 0.00012 2.5E-09 72.6 -13.0 174 31-204 89-304 (478)
495 KOG0473 Leucine-rich repeat pr 94.6 0.00078 1.7E-08 58.2 -6.6 88 24-114 37-124 (326)
496 KOG1166 Mitotic checkpoint ser 93.4 0.043 9.4E-07 58.5 2.1 54 402-461 696-749 (974)
497 cd05154 ACAD10_11_like Acyl-Co 93.2 0.18 3.9E-06 44.8 5.5 71 410-482 4-79 (223)
498 KOG1345 Serine/threonine kinas 92.9 0.063 1.4E-06 47.9 2.0 64 403-470 23-88 (378)
499 KOG0473 Leucine-rich repeat pr 92.8 0.0018 4E-08 56.0 -7.3 86 3-91 40-125 (326)
500 PRK01723 3-deoxy-D-manno-octul 92.8 0.26 5.6E-06 44.6 6.0 65 409-474 36-113 (239)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.2e-53 Score=458.58 Aligned_cols=467 Identities=32% Similarity=0.511 Sum_probs=327.5
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
+++++|++|++++|.+++.+|..++.+++|++|+|++|++.+.+|..+.++++|++|++++|.+++.+|..+.++++|++
T Consensus 233 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 312 (968)
T PLN00113 233 GGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEI 312 (968)
T ss_pred hcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcE
Confidence 56778888888888887788888888888888888888888778888888888888888888887777777777888888
Q ss_pred EEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCccc---------------------
Q 036034 82 LDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINAS--------------------- 140 (482)
Q Consensus 82 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~--------------------- 140 (482)
|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..++.+++|+.|++++|.+.+.
T Consensus 313 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l 392 (968)
T PLN00113 313 LHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSL 392 (968)
T ss_pred EECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEe
Confidence 88888887777777777777788888887777777777777777777777777765421
Q ss_pred ----------ccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccC
Q 036034 141 ----------LVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEI 210 (482)
Q Consensus 141 ----------~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 210 (482)
+++|+.|++++|.+++..|..+..++.|+.|++++|.+.+.++..+..+++|+.|++++|.+.+.+|..+
T Consensus 393 ~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~ 472 (968)
T PLN00113 393 EGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF 472 (968)
T ss_pred cccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc
Confidence 3355555555555555555555666666666666666665555555566666666666666666555544
Q ss_pred cCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCE
Q 036034 211 GNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDT 290 (482)
Q Consensus 211 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 290 (482)
..++|+.|++++|++.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+++.+|..+..+++|+.
T Consensus 473 -~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 551 (968)
T PLN00113 473 -GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQ 551 (968)
T ss_pred -ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCE
Confidence 3467788888888888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCccccccCccCC---CCCeEeccCCcCcccCCCCCC---------C------C--------CCCCCCCcc--eee
Q 036034 291 VDLSMNNLSGSIPKSVR---KVPHLDVLGNNLEGEIPSTSA---------N------G--------PPPHHKKIA--TRL 342 (482)
Q Consensus 291 l~l~~n~l~~~~p~~~~---~l~~l~~~~n~~~~~~~~~~~---------~------~--------~~~~~~~~~--~~~ 342 (482)
|++++|++++.+|..+. .+..+++++|++.+..|.... . + ++...+... ..+
T Consensus 552 L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~ 631 (968)
T PLN00113 552 LDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFY 631 (968)
T ss_pred EECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeee
Confidence 99999999999998654 478899999999987775210 0 0 011111111 122
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhc-ccCCCCccccccccCCcceeec--CCCcccHHHHHHHhhcccccceeCccCcEE
Q 036034 343 VPIILAMVALLALIFGILIIRARRD-KKVEPAETGEITKCADEFAIWN--YDGRITFQDIIEATEDFHIKYCIGTGGYGS 419 (482)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ig~g~~g~ 419 (482)
+++++++++++++++++++++++++ ++.+..+.... ......+. ....++++++. ..+...+.||+|+||.
T Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~ 705 (968)
T PLN00113 632 ITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDG---TWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGA 705 (968)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc---cccccccccccchhhhHHHHH---hhCCcccEEccCCCee
Confidence 2222222222222222222222222 11111111100 00001111 11223444443 4566778999999999
Q ss_pred EEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 420 VYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 420 v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|+. .+++.||||+++.... ....|++.+++++|||||+++|+|.+++..|+||
T Consensus 706 Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 706 SYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred EEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 999995 5789999999864321 1234688999999999999999999999999886
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.8e-39 Score=349.12 Aligned_cols=320 Identities=38% Similarity=0.589 Sum_probs=180.4
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLD 83 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 83 (482)
+++|++|+|++|.+++.+|..++.+++|++|+|++|.+.+.+|..++++++|++|++++|.+++.+|..++++++|++|+
T Consensus 139 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 218 (968)
T PLN00113 139 IPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIY 218 (968)
T ss_pred cCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEE
Confidence 44455555555555555555555555666666665555555555555555666666665555555555555555666666
Q ss_pred ccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCccc-------ccCcCEEEcccCeecc
Q 036034 84 LSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINAS-------LVNLTSLSLHYNNLTG 156 (482)
Q Consensus 84 L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~-------~~~L~~L~l~~n~~~~ 156 (482)
|++|.+.+.+|..++++++|++|++++|.+.+..|..++++++|++|++++|.+.+. +.+|+.|++++|.+.+
T Consensus 219 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~ 298 (968)
T PLN00113 219 LGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG 298 (968)
T ss_pred CcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeecc
Confidence 665555555555555566666666666655555555555566666666655555421 3455566666666555
Q ss_pred cCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcC
Q 036034 157 PIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMN 236 (482)
Q Consensus 157 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 236 (482)
.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..++.+++|+.|++++|++.+.+|.++..
T Consensus 299 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~ 378 (968)
T PLN00113 299 EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCS 378 (968)
T ss_pred CCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhC
Confidence 55555555556666666666555555555555556666666666555555555555555555666555555555555555
Q ss_pred CCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCcc---CCCCCeEe
Q 036034 237 CSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKS---VRKVPHLD 313 (482)
Q Consensus 237 ~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~---~~~l~~l~ 313 (482)
+++|+.|++++|.+.+.+|..++.+++|+.|++++|++.+..|..+..++.|+.+++++|++++.+|.. +.++..++
T Consensus 379 ~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 458 (968)
T PLN00113 379 SGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLS 458 (968)
T ss_pred cCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEE
Confidence 555555555555555555555555555666666666555555555555555555555555555544432 22344445
Q ss_pred ccCCcCcccC
Q 036034 314 VLGNNLEGEI 323 (482)
Q Consensus 314 ~~~n~~~~~~ 323 (482)
+.+|.+.+..
T Consensus 459 L~~n~~~~~~ 468 (968)
T PLN00113 459 LARNKFFGGL 468 (968)
T ss_pred CcCceeeeec
Confidence 5554444433
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=270.05 Aligned_cols=319 Identities=24% Similarity=0.263 Sum_probs=183.0
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
.++++|+.+++.+|.++ .+|..-....+|+.|+|.+|.|+..-..++..++.|+.|||+.|.|+..--..|..-.++++
T Consensus 99 ~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~ 177 (873)
T KOG4194|consen 99 YNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKK 177 (873)
T ss_pred hcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceE
Confidence 35667777777777764 45554444556777777777777666666777777777777777776444455666667777
Q ss_pred EEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcCEEEcccCee
Q 036034 82 LDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLTSLSLHYNNL 154 (482)
Q Consensus 82 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~~L~l~~n~~ 154 (482)
|+|++|.|+..-.+.|..+.+|..|.|+.|+++...+..|+++++|+.|+|..|.|.. .+++|+.|.+..|++
T Consensus 178 L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I 257 (873)
T KOG4194|consen 178 LNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDI 257 (873)
T ss_pred EeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCc
Confidence 7777777776667777777777777777777775555667777777777777777652 244555555555555
Q ss_pred cccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccC
Q 036034 155 TGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPEL 234 (482)
Q Consensus 155 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 234 (482)
.......|..+.++++|+|..|++...-..++.++++|+.|+++.|.+...-+..+.-.++|+.|+++.|+++..-+..|
T Consensus 258 ~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf 337 (873)
T KOG4194|consen 258 SKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSF 337 (873)
T ss_pred ccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHH
Confidence 54444455555555555555555544444445555555555555555554444445555555555555555554444444
Q ss_pred cCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccch---hhcCCCCCCEEECCCCccccccCc---cCCC
Q 036034 235 MNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILS---ELGAIPSIDTVDLSMNNLSGSIPK---SVRK 308 (482)
Q Consensus 235 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~---~~~~~~~L~~l~l~~n~l~~~~p~---~~~~ 308 (482)
..+..|++|.|+.|.++......|..+++|+.|||++|.++..+-+ .+.++++|+.|++.+|++....-. .+..
T Consensus 338 ~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~ 417 (873)
T KOG4194|consen 338 RVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEA 417 (873)
T ss_pred HHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcc
Confidence 4445555555555554433334444445555555555554433222 233445555555555554432222 2233
Q ss_pred CCeEeccCCcCcc
Q 036034 309 VPHLDVLGNNLEG 321 (482)
Q Consensus 309 l~~l~~~~n~~~~ 321 (482)
+.+|++.+|.+..
T Consensus 418 LE~LdL~~NaiaS 430 (873)
T KOG4194|consen 418 LEHLDLGDNAIAS 430 (873)
T ss_pred cceecCCCCccee
Confidence 4444555554443
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.98 E-value=4.6e-34 Score=268.20 Aligned_cols=306 Identities=25% Similarity=0.273 Sum_probs=273.3
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLD 83 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 83 (482)
..+|+.|+|.+|.|+....+.+..++.||.|||+.|.|+...-.+|.+-.+|++|+|++|.|+..-...|.++.+|.+|.
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 45699999999999988888999999999999999999966667788889999999999999988888999999999999
Q ss_pred ccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcCEEEcccCeecc
Q 036034 84 LSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLTSLSLHYNNLTG 156 (482)
Q Consensus 84 L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~~L~l~~n~~~~ 156 (482)
|+.|+++...+..|+++++|+.|+|..|+|.-.-.-.|.++++|+.|.|..|.|.. .+.++++|+|+.|+++.
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~ 283 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA 283 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh
Confidence 99999997777788889999999999999985446678999999999999999874 37899999999999998
Q ss_pred cCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcC
Q 036034 157 PIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMN 236 (482)
Q Consensus 157 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 236 (482)
.-..++.++..|+.|+++.|.|...-++.++..++|++|+|+.|+++..-+..+..+..|+.|++++|+++..-...|..
T Consensus 284 vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~ 363 (873)
T KOG4194|consen 284 VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVG 363 (873)
T ss_pred hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHH
Confidence 88888999999999999999999888889999999999999999999888888999999999999999998655567888
Q ss_pred CCCCCEEEcCCCcCcccCC---ccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccCCCC
Q 036034 237 CSKLMELELGNNLLRGSIP---SEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSVRKV 309 (482)
Q Consensus 237 ~~~L~~L~l~~n~l~~~~~---~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~~l 309 (482)
+.+|+.|||++|.++..+. ..|..++.|+.|++.+|++....-.++.+++.|+.||+.+|.+...-|..|.++
T Consensus 364 lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m 439 (873)
T KOG4194|consen 364 LSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM 439 (873)
T ss_pred hhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc
Confidence 9999999999999876654 345668999999999999997666789999999999999999998888887764
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=6.3e-32 Score=255.86 Aligned_cols=290 Identities=31% Similarity=0.446 Sum_probs=150.7
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccc-cCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVG-NIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
.|.+|++|.+++|.++ .+-..+..++.||.+.+..|++.. -+|..+-++..|+.|||++|++. ..|..+..-+++-.
T Consensus 53 ~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iV 130 (1255)
T KOG0444|consen 53 RLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIV 130 (1255)
T ss_pred HHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEE
Confidence 3455555555555553 233445555555555555555442 24555555666666666666665 45555555555666
Q ss_pred EEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcCEEEcccCee
Q 036034 82 LDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLTSLSLHYNNL 154 (482)
Q Consensus 82 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~~L~l~~n~~ 154 (482)
|+|++|+|..+...-+.+++.|-.|+|++|++. .+|+.+..+..|++|.|++|.+.- .+..|+.|.+++.+-
T Consensus 131 LNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqR 209 (1255)
T KOG0444|consen 131 LNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQR 209 (1255)
T ss_pred EEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccc
Confidence 666666665332233445556666666666655 455566666666666666665541 122333334433322
Q ss_pred c-ccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCcc
Q 036034 155 T-GPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPE 233 (482)
Q Consensus 155 ~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 233 (482)
+ ..+|.++..+.+|..+|++.|.+. .+|+.+-.+++|+.|+|++|.++ .+....+...+|++|++++|+++ .+|..
T Consensus 210 Tl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~a 286 (1255)
T KOG0444|consen 210 TLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDA 286 (1255)
T ss_pred hhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHH
Confidence 1 234555555555555555555554 45555555555555555555554 23333344445555555555554 44555
Q ss_pred CcCCCCCCEEEcCCCcCcc-cCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccc
Q 036034 234 LMNCSKLMELELGNNLLRG-SIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLS 299 (482)
Q Consensus 234 ~~~~~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~ 299 (482)
+..+++|+.|.+.+|+++. -+|+.++++..|+.+..++|.+. ..|..++.++.|+.|.+++|.+.
T Consensus 287 vcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi 352 (1255)
T KOG0444|consen 287 VCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI 352 (1255)
T ss_pred HhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee
Confidence 5555555555555554432 24555555555555555555443 34444555555555555555544
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=3e-31 Score=251.27 Aligned_cols=297 Identities=29% Similarity=0.365 Sum_probs=260.3
Q ss_pred CCCCCCCCEEeccCCccc-cCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCC
Q 036034 1 MGRLRNLVHLDLSDNYLW-GYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFL 79 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 79 (482)
++.|+.|+.+++++|.+. .-+|+.+-++..|..|+|+.|++. ..|..+...+++..|+|++|+|..+....|.+|.-|
T Consensus 74 Ls~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDL 152 (1255)
T KOG0444|consen 74 LSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDL 152 (1255)
T ss_pred hccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhH
Confidence 357899999999999774 236777778999999999999999 899999999999999999999996544567889999
Q ss_pred CEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCc--------ccccCcCEEEccc
Q 036034 80 QVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLIN--------ASLVNLTSLSLHY 151 (482)
Q Consensus 80 ~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~--------~~~~~L~~L~l~~ 151 (482)
-.|||++|++. .+|..+..+.+|+.|.|++|.+.-..-..+..|++|+.|.+++.+-+ ..+.+|..++++.
T Consensus 153 LfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~ 231 (1255)
T KOG0444|consen 153 LFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSE 231 (1255)
T ss_pred hhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccc
Confidence 99999999997 78999999999999999999986544455667788888888876533 2477899999999
Q ss_pred CeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccC-CC
Q 036034 152 NNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDG-PI 230 (482)
Q Consensus 152 n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~ 230 (482)
|++. .+|+++.++.+|+.|+|++|.++ .+....+.+.+|++|+++.|+++ .+|..++.+++|+.|.+.+|+++- -+
T Consensus 232 N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGi 308 (1255)
T KOG0444|consen 232 NNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGI 308 (1255)
T ss_pred cCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCC
Confidence 9998 78999999999999999999998 45556677889999999999998 899999999999999999999863 48
Q ss_pred CccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCc
Q 036034 231 PPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPK 304 (482)
Q Consensus 231 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~ 304 (482)
|..++.+..|+.+..++|.+. .+|..+.+|+.|+.|.|+.|++- +.|.++.-++.|+.||+..|+-.--+|.
T Consensus 309 PSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 309 PSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred ccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCC
Confidence 899999999999999999997 89999999999999999999987 6789999999999999999876544443
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=4.8e-30 Score=231.23 Aligned_cols=305 Identities=31% Similarity=0.470 Sum_probs=232.5
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCcccc-CCCCCCEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIG-NLNFLQVL 82 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L 82 (482)
++.|++||.-.|-+ +.+|+.++.+.+|+.|+|+.|++. .+| +|.++..|++|.+..|++. .+|.+.+ .+++|.+|
T Consensus 182 m~~L~~ld~~~N~L-~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vL 257 (565)
T KOG0472|consen 182 MKRLKHLDCNSNLL-ETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVL 257 (565)
T ss_pred HHHHHhcccchhhh-hcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceee
Confidence 45677888888877 478888999999999999999988 666 8889999999999999988 5676665 89999999
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCccc----------------------
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINAS---------------------- 140 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~---------------------- 140 (482)
||.+|++. ..|+.+..+.+|.+||+++|.++ .+|..++++ .|+.|.+.+|.+...
T Consensus 258 DLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~ 334 (565)
T KOG0472|consen 258 DLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 334 (565)
T ss_pred eccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 99999998 79999999999999999999998 588899999 999999999986420
Q ss_pred --------------------------ccCcCEEEcccCeecccCCccCcCCCC---CCEEEccCCccccCCCcCCcCCCC
Q 036034 141 --------------------------LVNLTSLSLHYNNLTGPIPSTLGHLNR---IRILDLSENKLVGPIPSSVGHLTQ 191 (482)
Q Consensus 141 --------------------------~~~L~~L~l~~n~~~~~~~~~~~~l~~---L~~L~l~~n~l~~~~~~~~~~l~~ 191 (482)
..+.+.|+++.-+++ .+|+......+ .+..+++.|++. .+|..+..+..
T Consensus 335 dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lke 412 (565)
T KOG0472|consen 335 DGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKE 412 (565)
T ss_pred CCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHH
Confidence 123555666666665 34433332222 567777777776 56666665554
Q ss_pred CCEE-eccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEecc
Q 036034 192 LNTL-NMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLS 270 (482)
Q Consensus 192 L~~L-~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 270 (482)
+.+. .++.|.+ +.+|..++.+++|..|++++|.+. .+|..++.+-.|+.|+++.|.|. .+|.++..+..++.+-.+
T Consensus 413 lvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas 489 (565)
T KOG0472|consen 413 LVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLAS 489 (565)
T ss_pred HHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhc
Confidence 4443 3444444 366777788888888888888776 57777888878888888888877 677777777777777777
Q ss_pred CCcCccccchhhcCCCCCCEEECCCCccccccCc--cCCCCCeEeccCCcCc
Q 036034 271 HNFINGKILSELGAIPSIDTVDLSMNNLSGSIPK--SVRKVPHLDVLGNNLE 320 (482)
Q Consensus 271 ~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~--~~~~l~~l~~~~n~~~ 320 (482)
+|++....++.+..+.+|.+||+.+|.+...+|. .+.++.++++.+|++.
T Consensus 490 ~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 490 NNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 7888776677788888999999999888844332 3455788899999886
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.92 E-value=7.1e-29 Score=223.71 Aligned_cols=314 Identities=33% Similarity=0.529 Sum_probs=169.1
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
++..+++|++++|.++ .+|.+++++..++.++.+.|+++ .+|..+..+.+|+.|+.++|.+. .+|+.++.+-.|+.|
T Consensus 66 nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl 142 (565)
T KOG0472|consen 66 NLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDL 142 (565)
T ss_pred cccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhh
Confidence 4455556666665553 34444444444444444444444 44444444444444444444443 233333333333333
Q ss_pred EccCCcccccCCccCcC-----------------------CCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc
Q 036034 83 DLSGNEIRGSIPSTFGH-----------------------LKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA 139 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~-----------------------l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 139 (482)
+..+|+++ .+|+++.+ ++.|++|+...|.+. .+|+.++.+.+|..|+++.|.+..
T Consensus 143 ~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~ 220 (565)
T KOG0472|consen 143 DATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRF 220 (565)
T ss_pred hccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhccccc
Confidence 33333333 23333333 444455555444443 455556666666666666665542
Q ss_pred -----cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCC
Q 036034 140 -----SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLK 214 (482)
Q Consensus 140 -----~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 214 (482)
.+..|.+++++.|.+.-...+...+++++..||+.+|++. ..|+.+.-+.+|++|++++|.++ .+|..++++
T Consensus 221 lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl- 297 (565)
T KOG0472|consen 221 LPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL- 297 (565)
T ss_pred CCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-
Confidence 2344555666665555222233346666667777777665 56666666666777777777666 456666666
Q ss_pred CCCeeeccCCcccC----------------------------------------------------------------CC
Q 036034 215 RVEAVKLYDNKLDG----------------------------------------------------------------PI 230 (482)
Q Consensus 215 ~L~~L~l~~n~l~~----------------------------------------------------------------~~ 230 (482)
.|+.|.+.+|.+.. .+
T Consensus 298 hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~V 377 (565)
T KOG0472|consen 298 HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLV 377 (565)
T ss_pred eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccC
Confidence 66666666664420 00
Q ss_pred CccCcCC---CCCCEEEcCCCcCc-----------------------ccCCccccCccCCCEEeccCCcCccccchhhcC
Q 036034 231 PPELMNC---SKLMELELGNNLLR-----------------------GSIPSEIGKLQELYYLDLSHNFINGKILSELGA 284 (482)
Q Consensus 231 ~~~~~~~---~~L~~L~l~~n~l~-----------------------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 284 (482)
|...... .-....+++.|++. +.+|..+..+++|..|++++|.+. .+|.+++.
T Consensus 378 PdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~ 456 (565)
T KOG0472|consen 378 PDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGS 456 (565)
T ss_pred CHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhh
Confidence 0000000 01334455555443 134555667888888888888876 56777888
Q ss_pred CCCCCEEECCCCcccc-----------------------ccCcc---CCCCCeEeccCCcCcccCCC
Q 036034 285 IPSIDTVDLSMNNLSG-----------------------SIPKS---VRKVPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 285 ~~~L~~l~l~~n~l~~-----------------------~~p~~---~~~l~~l~~~~n~~~~~~~~ 325 (482)
+..|+.++++.|.+.. ..|+. +.++..+|+..|.+...+|.
T Consensus 457 lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~ 523 (565)
T KOG0472|consen 457 LVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI 523 (565)
T ss_pred hhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChh
Confidence 8888888888887632 12222 34477788888888765554
No 9
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=2.7e-22 Score=219.52 Aligned_cols=279 Identities=20% Similarity=0.237 Sum_probs=140.0
Q ss_pred CCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeC
Q 036034 29 SKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDL 108 (482)
Q Consensus 29 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L 108 (482)
.+|+.|++.+|++. .++..+..+++|++|+|+++.....+| .++.+++|++|+|++|.....+|..+.++++|+.|++
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L 688 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM 688 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeC
Confidence 44444444444444 334444444444444444443222333 2444444444444444333344444444445555555
Q ss_pred cCCcccccCCccccCCCCCCEEEcccccCcc----cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccc-----
Q 036034 109 SQNKLVGPIPSSLGHLTQLTTLNMRSNLINA----SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLV----- 179 (482)
Q Consensus 109 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~----~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~----- 179 (482)
++|.....+|..+ ++++|++|++.+|.... ...+|+.|++++|.+. .+|..+ .+++|+.|++.++...
T Consensus 689 ~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~ 765 (1153)
T PLN03210 689 SRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWER 765 (1153)
T ss_pred CCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccc-cccccccccccccchhhcccc
Confidence 4443333334333 34444444444443211 1234445555554443 233322 2334444444332110
Q ss_pred --cCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCcc
Q 036034 180 --GPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSE 257 (482)
Q Consensus 180 --~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 257 (482)
...+......++|+.|++++|.....+|..++++++|+.|++++|...+.+|... .+++|+.|++++|.....+|..
T Consensus 766 ~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~ 844 (1153)
T PLN03210 766 VQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI 844 (1153)
T ss_pred ccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc
Confidence 0000111123467777777776666677777777777777777765444555544 5677777777776543344432
Q ss_pred ccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccC---CCCCeEeccCC
Q 036034 258 IGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSV---RKVPHLDVLGN 317 (482)
Q Consensus 258 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~---~~l~~l~~~~n 317 (482)
.++|+.|++++|.+. .+|..+..+++|+.|++++|+-...+|..+ ..+..+++.++
T Consensus 845 ---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 845 ---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred ---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 356777777777776 456667777778888877744433444433 33455555554
No 10
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=3.3e-22 Score=218.86 Aligned_cols=283 Identities=25% Similarity=0.292 Sum_probs=226.0
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLD 83 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 83 (482)
..+|+.|++++|.+. .++..+..+++|+.|+|++|.....+|. +..+++|++|+|++|.....+|..+.++++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 468999999999985 6778888999999999999876557774 88899999999999887778999999999999999
Q ss_pred ccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-----cccCcCEEEcccCeec---
Q 036034 84 LSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-----SLVNLTSLSLHYNNLT--- 155 (482)
Q Consensus 84 L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-----~~~~L~~L~l~~n~~~--- 155 (482)
+++|.....+|..+ ++++|+.|++++|.....+|.. .++|++|++.+|.+.. .+++|+.|.+.++...
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~ 763 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLW 763 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccccccccccccccccccccchhhcc
Confidence 99986555788766 7899999999999765555543 4688999999998764 2467777777664321
Q ss_pred ----ccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCC
Q 036034 156 ----GPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIP 231 (482)
Q Consensus 156 ----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 231 (482)
...+......++|+.|++++|...+.+|..++++++|+.|++++|...+.+|..+ .+++|+.|++++|.....+|
T Consensus 764 ~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p 842 (1153)
T PLN03210 764 ERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFP 842 (1153)
T ss_pred ccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccc
Confidence 1112222335689999999998877899999999999999999986555777766 78999999999986554554
Q ss_pred ccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCc
Q 036034 232 PELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNN 297 (482)
Q Consensus 232 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~ 297 (482)
.. .++|+.|++++|.++ .+|..+..+++|+.|++++|+-...++.....++.|+.+++++|.
T Consensus 843 ~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 843 DI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 42 468999999999997 688889999999999999865444566777788899999998874
No 11
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=8.1e-23 Score=208.31 Aligned_cols=262 Identities=25% Similarity=0.344 Sum_probs=211.0
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
+-..|+++++.++ .+|+.+. ++|+.|++.+|+++ .+|. .+++|++|++++|+++ .+|.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 4568999999997 6788775 58999999999999 4664 3689999999999998 46643 4689999999
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCccc---ccCcCEEEcccCeecccCCccC
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINAS---LVNLTSLSLHYNNLTGPIPSTL 162 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~---~~~L~~L~l~~n~~~~~~~~~~ 162 (482)
+|.+. .+|.. .++|+.|++++|+++ .+|. .+++|+.|++++|.+... ..+|+.|++++|.+++ +|..
T Consensus 271 ~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~~Lp~lp~~L~~L~Ls~N~L~~-LP~l- 340 (788)
T PRK15387 271 SNPLT-HLPAL---PSGLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTS-LPTL- 340 (788)
T ss_pred CCchh-hhhhc---hhhcCEEECcCCccc-cccc---cccccceeECCCCccccCCCCcccccccccccCcccc-cccc-
Confidence 99987 45543 357889999999998 4564 347899999999998762 4578999999999984 5542
Q ss_pred cCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCE
Q 036034 163 GHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLME 242 (482)
Q Consensus 163 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 242 (482)
..+|+.|++++|+++ .+|.. ..+|+.|++++|++++ +|.. ..+|+.|++++|++.+ +|.. .++|+.
T Consensus 341 --p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~ 406 (788)
T PRK15387 341 --PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKE 406 (788)
T ss_pred --ccccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCE
Confidence 257999999999998 46653 3578889999999984 6643 3579999999999984 5543 367999
Q ss_pred EEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccCC
Q 036034 243 LELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSVR 307 (482)
Q Consensus 243 L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~ 307 (482)
|++++|.++ .+|.. ..+|+.|++++|++. .+|..+..+++|+.+++++|++++..|..+.
T Consensus 407 LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~ 466 (788)
T PRK15387 407 LMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 466 (788)
T ss_pred EEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHH
Confidence 999999998 46653 357889999999998 6788899999999999999999998777653
No 12
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-24 Score=215.82 Aligned_cols=284 Identities=33% Similarity=0.401 Sum_probs=163.6
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
+|+.||+++|.+. ..|..+..+.+|+.|+++.|-+. ..|.++.++.+|++|+|..|.+. .+|..+..+++|+.|+++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 4889999999884 67888888899999999999888 77788889999999999988887 688899999999999999
Q ss_pred CCcccccCCccCcCCCCC-------------------CEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------
Q 036034 86 GNEIRGSIPSTFGHLKRL-------------------KSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA------- 139 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L-------------------~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~------- 139 (482)
+|++. .+|..+..++.+ +.+++..|.+.+.++..+..++. .|+++.|.+..
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~dls~~~ 199 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVLDLSNLA 199 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhhhhhhcc
Confidence 99886 455444433333 33444444444444444444444 46666665541
Q ss_pred -----------------cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCcc
Q 036034 140 -----------------SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQI 202 (482)
Q Consensus 140 -----------------~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 202 (482)
.-++++.|+.++|.++...+. ..-.+|++++++.|.++ .+|++++.+.+|+.++...|++
T Consensus 200 ~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l 276 (1081)
T KOG0618|consen 200 NLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRL 276 (1081)
T ss_pred chhhhhhhhcccceEEecCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhH
Confidence 012333333333333311111 11234555555555555 3445555555555555555555
Q ss_pred cc----------------------ccCccCcCCCCCCeeeccCCcccCCCCcc-Cc------------------------
Q 036034 203 NG----------------------SIPLEIGNLKRVEAVKLYDNKLDGPIPPE-LM------------------------ 235 (482)
Q Consensus 203 ~~----------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~------------------------ 235 (482)
.. -+|.....+.+|++|++..|++.. +|+. +.
T Consensus 277 ~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e 355 (1081)
T KOG0618|consen 277 VALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPSYEE 355 (1081)
T ss_pred HhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhhhhccccccccccc
Confidence 30 334444445555555555555432 1111 00
Q ss_pred -CCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccc
Q 036034 236 -NCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLS 299 (482)
Q Consensus 236 -~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~ 299 (482)
.++.|+.|++.+|.+++..-..+..+++|+.|+|++|++.......+..++.|+.|++|+|.++
T Consensus 356 ~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~ 420 (1081)
T KOG0618|consen 356 NNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT 420 (1081)
T ss_pred hhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh
Confidence 1123444444555554444444445555555555555555333334455555555555555554
No 13
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.86 E-value=7.3e-24 Score=191.17 Aligned_cols=300 Identities=24% Similarity=0.272 Sum_probs=222.6
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeeccc-CcceeccCccccCCCCCCEEEc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIAS-NHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~L 84 (482)
+-+.|+|..|+|+...+..|+.+++||+|||+.|.|+.+-|++|.++++|..|-+.+ |+|+..-...|.+|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 457899999999888888999999999999999999999999999999988887776 9998655577899999999999
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------------------------
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA------------------------- 139 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~------------------------- 139 (482)
.-|++.-...+.|..+++|..|.+-+|.+....-..|..+..++.+.+..|....
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 9999988888899999999999999999875444478888888888887776210
Q ss_pred --------------------------------------------cccCcCEEEcccCeecccCCccCcCCCCCCEEEccC
Q 036034 140 --------------------------------------------SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSE 175 (482)
Q Consensus 140 --------------------------------------------~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 175 (482)
.+++|+.|+|++|.+++..+.+|.+...+++|.|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 056788888888888888888888888888888888
Q ss_pred CccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCC-----CCccC-----------cCCCC
Q 036034 176 NKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGP-----IPPEL-----------MNCSK 239 (482)
Q Consensus 176 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----~~~~~-----------~~~~~ 239 (482)
|++...-...|.++..|+.|+|.+|+++-..|..|..+.+|.+|.+-.|.+.-. +.+|+ ++...
T Consensus 308 N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~ 387 (498)
T KOG4237|consen 308 NKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGF 387 (498)
T ss_pred chHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCch
Confidence 888755556777888888888888888877788888888888888877766421 01111 11234
Q ss_pred CCEEEcCCCcCcc---cCCcc------------------ccCcc-------------CCCEEeccCCcCccccchhhcCC
Q 036034 240 LMELELGNNLLRG---SIPSE------------------IGKLQ-------------ELYYLDLSHNFINGKILSELGAI 285 (482)
Q Consensus 240 L~~L~l~~n~l~~---~~~~~------------------~~~~~-------------~L~~L~l~~n~l~~~~~~~~~~~ 285 (482)
++.+.++...+.+ ..|.. ..+++ .-.++++++|.++. +|.+ .+
T Consensus 388 ~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP~d~telyl~gn~~~~-vp~~--~~ 464 (498)
T KOG4237|consen 388 VRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIPVDVTELYLDGNAITS-VPDE--LL 464 (498)
T ss_pred hccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCCCchhHHHhcccchhcc-cCHH--HH
Confidence 5555555543321 01110 01111 23568889998873 4444 45
Q ss_pred CCCCEEECCCCccccccCccCCCC
Q 036034 286 PSIDTVDLSMNNLSGSIPKSVRKV 309 (482)
Q Consensus 286 ~~L~~l~l~~n~l~~~~p~~~~~l 309 (482)
.+| .+|+++|+++.-.-..+.++
T Consensus 465 ~~l-~~dls~n~i~~Lsn~tf~n~ 487 (498)
T KOG4237|consen 465 RSL-LLDLSNNRISSLSNYTFSNM 487 (498)
T ss_pred hhh-hcccccCceehhhcccccch
Confidence 566 89999999875444444443
No 14
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=9.9e-21 Score=193.16 Aligned_cols=241 Identities=25% Similarity=0.350 Sum_probs=194.3
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
++|+.|++++|+++. +|.. +++|++|+|++|+++ .+|.. .++|++|++++|.++ .+|..+ .+|+.|++
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~L 289 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWI 289 (788)
T ss_pred cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhch---hhcCEEEC
Confidence 368999999999974 6653 589999999999999 55643 478999999999998 456533 57889999
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCccc---ccCcCEEEcccCeecccCCcc
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINAS---LVNLTSLSLHYNNLTGPIPST 161 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~---~~~L~~L~l~~n~~~~~~~~~ 161 (482)
++|+++ .+|. .+++|+.|++++|++.+ +|... .+|+.|++.+|.+... ..+|+.|++++|++++ +|..
T Consensus 290 s~N~Lt-~LP~---~p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls~-LP~l 360 (788)
T PRK15387 290 FGNQLT-SLPV---LPPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLAS-LPTL 360 (788)
T ss_pred cCCccc-cccc---cccccceeECCCCcccc-CCCCc---ccccccccccCccccccccccccceEecCCCccCC-CCCC
Confidence 999998 4564 34789999999999985 55433 4678889999998752 3589999999999994 5543
Q ss_pred CcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCC
Q 036034 162 LGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLM 241 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 241 (482)
..+|+.|++++|.+. .+|.. ..+|+.|++++|.+++ +|.. .++|+.|++++|.+.+ +|.. ..+|+
T Consensus 361 ---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~ 425 (788)
T PRK15387 361 ---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLL 425 (788)
T ss_pred ---Ccccceehhhccccc-cCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhh
Confidence 357889999999998 46654 3579999999999984 5543 3579999999999984 5653 35688
Q ss_pred EEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhh
Q 036034 242 ELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSEL 282 (482)
Q Consensus 242 ~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 282 (482)
.|++++|+++ .+|..+..+++|+.|++++|++++..+..+
T Consensus 426 ~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 426 SLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred hhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 9999999998 789999999999999999999998877766
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.84 E-value=4e-23 Score=204.78 Aligned_cols=283 Identities=30% Similarity=0.387 Sum_probs=176.8
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
++++.|+.++|.++.. ...+ .-.+|++++++.|+++ .+|..++.+.+|+.+++.+|.++ .+|..+..+.+|+.|+.
T Consensus 219 ~~l~~L~a~~n~l~~~-~~~p-~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTL-DVHP-VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSA 294 (1081)
T ss_pred cchheeeeccCcceee-cccc-ccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHh
Confidence 4455555555555421 1111 1346666677766666 44566666677777777766664 56666666666666666
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCCcc-ccCCCC-CCEEEcccccCcc-------cccCcCEEEcccCeec
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSS-LGHLTQ-LTTLNMRSNLINA-------SLVNLTSLSLHYNNLT 155 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~-L~~L~l~~n~i~~-------~~~~L~~L~l~~n~~~ 155 (482)
..|.+. -+|.....+++|++|+|..|++.. +|+. +.-+.. |..|+.+.|.+.. .++.|+.|.+.+|.++
T Consensus 295 ~~nel~-yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Lt 372 (1081)
T KOG0618|consen 295 AYNELE-YIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLT 372 (1081)
T ss_pred hhhhhh-hCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccc
Confidence 666665 455556666667777777776653 3432 222222 4444444444432 2456777788888888
Q ss_pred ccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCc
Q 036034 156 GPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELM 235 (482)
Q Consensus 156 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 235 (482)
+...+.+.++++|+.|+|++|++.......+.++..|+.|+|++|.++ .+|..+..+..|++|....|.+. .+| .+.
T Consensus 373 d~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~ 449 (1081)
T KOG0618|consen 373 DSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELA 449 (1081)
T ss_pred ccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhh
Confidence 777777777888888888888876333345667778888888888877 67777777888888888888776 455 677
Q ss_pred CCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCC
Q 036034 236 NCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMN 296 (482)
Q Consensus 236 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n 296 (482)
.++.|+.+|++.|+++...-......++|++||+++|.-....-..+..+..+...+++-|
T Consensus 450 ~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 450 QLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 7788888888888776433222222377888888888643222233444444555555444
No 16
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=4.6e-20 Score=189.50 Aligned_cols=243 Identities=28% Similarity=0.412 Sum_probs=151.3
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
.+.+.|++++++++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|++|++++|+++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 45678999998886 4676553 57899999999988 5665543 58999999999987 5666553 47899999
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCccc----ccCcCEEEcccCeecccCCc
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINAS----LVNLTSLSLHYNNLTGPIPS 160 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~----~~~L~~L~l~~n~~~~~~~~ 160 (482)
++|.+. .+|..+. ++|+.|++++|++. .+|..+. ++|+.|++++|.+... ..+|+.|++++|.++. +|.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp~sL~~L~Ls~N~Lt~-LP~ 321 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTA-LPE 321 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccccCcccchhhHHHHHhcCCcccc-CCc
Confidence 999987 6676654 57899999999888 4666553 4788888887776532 2245556666666552 333
Q ss_pred cCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCC
Q 036034 161 TLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKL 240 (482)
Q Consensus 161 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 240 (482)
.+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.+. .+|..+. ..|
T Consensus 322 ~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL 390 (754)
T PRK15370 322 TL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AAL 390 (754)
T ss_pred cc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHH
Confidence 22 2456666666666552 444332 45666666666555 3443332 45556666666555 2333332 245
Q ss_pred CEEEcCCCcCcccCCccc----cCccCCCEEeccCCcCc
Q 036034 241 MELELGNNLLRGSIPSEI----GKLQELYYLDLSHNFIN 275 (482)
Q Consensus 241 ~~L~l~~n~l~~~~~~~~----~~~~~L~~L~l~~n~l~ 275 (482)
+.|++++|++. .+|..+ +.++.+..|++.+|+++
T Consensus 391 ~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 391 QIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 55566665555 333322 22345555555555554
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.81 E-value=1.1e-19 Score=186.58 Aligned_cols=244 Identities=23% Similarity=0.403 Sum_probs=191.1
Q ss_pred CCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeC
Q 036034 29 SKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDL 108 (482)
Q Consensus 29 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L 108 (482)
.+...|++++++++ .+|..+. +.|+.|+|++|+++ .+|..+. .+|++|++++|.++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 46789999999998 5676553 67999999999998 5776654 58999999999998 5676554 47999999
Q ss_pred cCCcccccCCccccCCCCCCEEEcccccCcc----cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCc
Q 036034 109 SQNKLVGPIPSSLGHLTQLTTLNMRSNLINA----SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPS 184 (482)
Q Consensus 109 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~----~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 184 (482)
++|++. .+|..+. .+|+.|++++|.+.. ...+|+.|++++|+++. +|..+. ..|+.|++++|.+. .+|.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~ 321 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-ALPE 321 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccCccccccCCCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-cCCc
Confidence 999998 5777664 589999999998874 23579999999999884 555443 47889999999998 4555
Q ss_pred CCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCC
Q 036034 185 SVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQEL 264 (482)
Q Consensus 185 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L 264 (482)
.+. ++|+.|++++|.+++ +|..+. ++|+.|++++|++. .+|..+ .+.|+.|++++|.++ .+|..+. ..|
T Consensus 322 ~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL 390 (754)
T PRK15370 322 TLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLP--AAL 390 (754)
T ss_pred ccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHH--HHH
Confidence 433 689999999999884 666554 68999999999987 466554 368999999999998 5666554 468
Q ss_pred CEEeccCCcCccccchh----hcCCCCCCEEECCCCcccc
Q 036034 265 YYLDLSHNFINGKILSE----LGAIPSIDTVDLSMNNLSG 300 (482)
Q Consensus 265 ~~L~l~~n~l~~~~~~~----~~~~~~L~~l~l~~n~l~~ 300 (482)
+.|++++|++.. +|.. ...++.+..+++.+|+++.
T Consensus 391 ~~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 391 QIMQASRNNLVR-LPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHhhccCCccc-CchhHHHHhhcCCCccEEEeeCCCccH
Confidence 899999999873 4433 3445888999999999874
No 18
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.80 E-value=1.7e-21 Score=185.86 Aligned_cols=277 Identities=22% Similarity=0.254 Sum_probs=176.5
Q ss_pred EEeccCCccc-cCCCcccCCCCCCCEEeCcCCccccc----CCccccCCCCCCeeecccCccee------ccCccccCCC
Q 036034 9 HLDLSDNYLW-GYIPPTLGRLSKLENLHLSSNSLVGN----IPSTLGHLTQLTTLAIASNHINV------SIPLEIGNLN 77 (482)
Q Consensus 9 ~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~------~~~~~~~~l~ 77 (482)
.|+|..+.++ ......+..+.+|+.|++++|.+++. ++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777776 33445566677899999999887532 45566677788888888887762 2334566677
Q ss_pred CCCEEEccCCcccccCCccCcCCCC---CCEEeCcCCccccc----CCccccCC-CCCCEEEcccccCcccccCcCEEEc
Q 036034 78 FLQVLDLSGNEIRGSIPSTFGHLKR---LKSLDLSQNKLVGP----IPSSLGHL-TQLTTLNMRSNLINASLVNLTSLSL 149 (482)
Q Consensus 78 ~L~~L~L~~n~~~~~~~~~l~~l~~---L~~L~L~~n~l~~~----~~~~l~~l-~~L~~L~l~~n~i~~~~~~L~~L~l 149 (482)
+|+.|++++|.+....+..+..+.+ |++|++++|++.+. +...+..+ ++|+.|++++|.+....
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~-------- 153 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGAS-------- 153 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchH--------
Confidence 8888888888776555555544444 88888887776631 22233444 55566555555543100
Q ss_pred ccCeecccCCccCcCCCCCCEEEccCCccccC----CCcCCcCCCCCCEEeccCCccccc----cCccCcCCCCCCeeec
Q 036034 150 HYNNLTGPIPSTLGHLNRIRILDLSENKLVGP----IPSSVGHLTQLNTLNMYSNQINGS----IPLEIGNLKRVEAVKL 221 (482)
Q Consensus 150 ~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l 221 (482)
...++..+..+.+|+.|++++|.+++. ++..+..+++|+.|++++|.+++. +...+..+++|+.|++
T Consensus 154 -----~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~l 228 (319)
T cd00116 154 -----CEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNL 228 (319)
T ss_pred -----HHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEec
Confidence 012233455566777777777777632 222344456777888877776533 2344556777888888
Q ss_pred cCCcccCCCCccCc-----CCCCCCEEEcCCCcCcc----cCCccccCccCCCEEeccCCcCcccc----chhhcCC-CC
Q 036034 222 YDNKLDGPIPPELM-----NCSKLMELELGNNLLRG----SIPSEIGKLQELYYLDLSHNFINGKI----LSELGAI-PS 287 (482)
Q Consensus 222 ~~n~l~~~~~~~~~-----~~~~L~~L~l~~n~l~~----~~~~~~~~~~~L~~L~l~~n~l~~~~----~~~~~~~-~~ 287 (482)
++|.+++.....+. ..+.|+.|++++|.+++ .+...+..+++|+++++++|.+.... ...+... +.
T Consensus 229 s~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~ 308 (319)
T cd00116 229 GDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNE 308 (319)
T ss_pred CCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCc
Confidence 88877653222221 24788999999988862 23344566688999999999988553 3334445 68
Q ss_pred CCEEECCCCcc
Q 036034 288 IDTVDLSMNNL 298 (482)
Q Consensus 288 L~~l~l~~n~l 298 (482)
++.+++.+|++
T Consensus 309 ~~~~~~~~~~~ 319 (319)
T cd00116 309 LESLWVKDDSF 319 (319)
T ss_pred hhhcccCCCCC
Confidence 89999988764
No 19
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.80 E-value=1.3e-21 Score=176.68 Aligned_cols=283 Identities=22% Similarity=0.229 Sum_probs=169.7
Q ss_pred eccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC-Ccc
Q 036034 11 DLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG-NEI 89 (482)
Q Consensus 11 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~-n~~ 89 (482)
|-++-+++ .+|..+- +.-..|+|..|.|+.+.+.+|+.+++|+.|||++|+|+.+.|.+|.++.+|.+|-+.+ |+|
T Consensus 52 dCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred EccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 33444443 4555442 4567889999999988888899999999999999999988899999999888877766 889
Q ss_pred cccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcCEEEcccCeecc------
Q 036034 90 RGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLTSLSLHYNNLTG------ 156 (482)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~~L~l~~n~~~~------ 156 (482)
+....+.|+.+..|+.|.+.-|++.......|..+++|..|.+..|.+.. .+..++.+.+..|.+-.
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~w 208 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPW 208 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccch
Confidence 87777789999999999999999987777888999999999888887763 24456666666554210
Q ss_pred ------cCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEE--ecc-CCccccccC-ccCcCCCCCCeeeccCCcc
Q 036034 157 ------PIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTL--NMY-SNQINGSIP-LEIGNLKRVEAVKLYDNKL 226 (482)
Q Consensus 157 ------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L--~l~-~n~l~~~~~-~~~~~l~~L~~L~l~~n~l 226 (482)
..|..++......-..+...++....+..+.. .++.+ .++ .+...+..| ..|..+++|+.|++++|++
T Consensus 209 la~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c--~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i 286 (498)
T KOG4237|consen 209 LADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLC--SLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKI 286 (498)
T ss_pred hhhHHhhchhhcccceecchHHHHHHHhcccchhhhhh--hHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCcc
Confidence 11122222221211122222221111111110 01111 011 111111111 2344555555555655555
Q ss_pred cCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCcc
Q 036034 227 DGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNL 298 (482)
Q Consensus 227 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l 298 (482)
+..-+.+|.....+++|.|..|++...-...|..+..|+.|+|.+|+|+...|.+|..+.+|.++.+-.|++
T Consensus 287 ~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 287 TRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred chhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 555555555555555666655555543344455555555566666665555555555555555555555554
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=4.7e-21 Score=182.89 Aligned_cols=274 Identities=23% Similarity=0.224 Sum_probs=189.7
Q ss_pred EEeCcCCccc-ccCCccccCCCCCCeeecccCcceec----cCccccCCCCCCEEEccCCcccc------cCCccCcCCC
Q 036034 33 NLHLSSNSLV-GNIPSTLGHLTQLTTLAIASNHINVS----IPLEIGNLNFLQVLDLSGNEIRG------SIPSTFGHLK 101 (482)
Q Consensus 33 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~~~~------~~~~~l~~l~ 101 (482)
.|+|..+.++ ......+..+.+|+.|+++++.++.. ++..+...+.|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777777 33445566778899999999988542 45556677788999998887762 2345666778
Q ss_pred CCCEEeCcCCcccccCCccccCCCC---CCEEEcccccCcccccCcCEEEcccCeecccCCccCcCC-CCCCEEEccCCc
Q 036034 102 RLKSLDLSQNKLVGPIPSSLGHLTQ---LTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHL-NRIRILDLSENK 177 (482)
Q Consensus 102 ~L~~L~L~~n~l~~~~~~~l~~l~~---L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l-~~L~~L~l~~n~ 177 (482)
+|+.|++++|.+.+..+..+..+.. |++|++++|.+... -...+...+..+ ++|+.|++++|.
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~-------------~~~~l~~~l~~~~~~L~~L~L~~n~ 148 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDR-------------GLRLLAKGLKDLPPALEKLVLGRNR 148 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchH-------------HHHHHHHHHHhCCCCceEEEcCCCc
Confidence 8888888888876544444444433 66666555544310 001222344555 789999999999
Q ss_pred cccC----CCcCCcCCCCCCEEeccCCccccc----cCccCcCCCCCCeeeccCCcccCC----CCccCcCCCCCCEEEc
Q 036034 178 LVGP----IPSSVGHLTQLNTLNMYSNQINGS----IPLEIGNLKRVEAVKLYDNKLDGP----IPPELMNCSKLMELEL 245 (482)
Q Consensus 178 l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l 245 (482)
+++. ++..+..+++|+.|++++|.+++. ++..+..+++|+.|++++|.+++. +...+..+++|+.|++
T Consensus 149 l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~l 228 (319)
T cd00116 149 LEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNL 228 (319)
T ss_pred CCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEec
Confidence 8742 334566778999999999999853 334455667999999999998744 3345667899999999
Q ss_pred CCCcCcccCCcccc-----CccCCCEEeccCCcCccc----cchhhcCCCCCCEEECCCCccccccC-------ccC-CC
Q 036034 246 GNNLLRGSIPSEIG-----KLQELYYLDLSHNFINGK----ILSELGAIPSIDTVDLSMNNLSGSIP-------KSV-RK 308 (482)
Q Consensus 246 ~~n~l~~~~~~~~~-----~~~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~l~l~~n~l~~~~p-------~~~-~~ 308 (482)
++|.+++.....+. ..+.|++|++++|.+.+. ....+..+++|+.+++++|.++.... ... ..
T Consensus 229 s~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~ 308 (319)
T cd00116 229 GDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNE 308 (319)
T ss_pred CCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCc
Confidence 99998863333222 247999999999998732 23445667899999999999986522 122 45
Q ss_pred CCeEeccCCcC
Q 036034 309 VPHLDVLGNNL 319 (482)
Q Consensus 309 l~~l~~~~n~~ 319 (482)
+..+++.+|++
T Consensus 309 ~~~~~~~~~~~ 319 (319)
T cd00116 309 LESLWVKDDSF 319 (319)
T ss_pred hhhcccCCCCC
Confidence 77778877653
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=8.7e-21 Score=152.30 Aligned_cols=164 Identities=31% Similarity=0.589 Sum_probs=111.3
Q ss_pred CCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEE
Q 036034 27 RLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSL 106 (482)
Q Consensus 27 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L 106 (482)
.+++.+.|.|+.|+++ .+|..+..+.+|+.|++.+|+++ .+|..++.++.|++|++..|++. .+|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3556667777777777 55666777777777777777776 56777777777777777777765 677777777777777
Q ss_pred eCcCCcccc-cCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcC
Q 036034 107 DLSQNKLVG-PIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSS 185 (482)
Q Consensus 107 ~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 185 (482)
+|.+|++.. .+|..|..|+.|+-|+++.|.+ . .+|..++++.+|+.|.+.+|.+. .+|..
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndf-----------------e-~lp~dvg~lt~lqil~lrdndll-~lpke 168 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDF-----------------E-ILPPDVGKLTNLQILSLRDNDLL-SLPKE 168 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCc-----------------c-cCChhhhhhcceeEEeeccCchh-hCcHH
Confidence 777776653 3555555555555555544443 2 56677777777777777777776 57777
Q ss_pred CcCCCCCCEEeccCCccccccCccCcCC
Q 036034 186 VGHLTQLNTLNMYSNQINGSIPLEIGNL 213 (482)
Q Consensus 186 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l 213 (482)
++.++.|++|++.+|+++ .+|..++++
T Consensus 169 ig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 169 IGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred HHHHHHHHHHhcccceee-ecChhhhhh
Confidence 777777788888887776 566665543
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.74 E-value=2.2e-20 Score=149.95 Aligned_cols=157 Identities=30% Similarity=0.574 Sum_probs=116.2
Q ss_pred cCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCE
Q 036034 50 GHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTT 129 (482)
Q Consensus 50 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 129 (482)
-.+..++.|.|++|+++ .+|..+..+.+|+.|++.+|+++ .+|.+++.+++|+.|++.-|++. .+|..|+.++.|+.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 35677888888888888 56778888888888888888887 68888888888888888888876 67888888777777
Q ss_pred EEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCcc
Q 036034 130 LNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLE 209 (482)
Q Consensus 130 L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 209 (482)
|++..|++.. ..+|..|..+..|+.|++++|.+. .+|..++++++|+.|.+..|.+. .+|..
T Consensus 107 ldltynnl~e----------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpke 168 (264)
T KOG0617|consen 107 LDLTYNNLNE----------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKE 168 (264)
T ss_pred hhcccccccc----------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHH
Confidence 7776665532 246666667777777777777775 66777777777777777777665 45666
Q ss_pred CcCCCCCCeeeccCCccc
Q 036034 210 IGNLKRVEAVKLYDNKLD 227 (482)
Q Consensus 210 ~~~l~~L~~L~l~~n~l~ 227 (482)
++.+..|+.|.+++|+++
T Consensus 169 ig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 169 IGDLTRLRELHIQGNRLT 186 (264)
T ss_pred HHHHHHHHHHhcccceee
Confidence 666666666666666554
No 23
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.62 E-value=1.3e-15 Score=145.35 Aligned_cols=89 Identities=36% Similarity=0.702 Sum_probs=79.6
Q ss_pred CCcccHHHHHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeE
Q 036034 391 DGRITFQDIIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYG 470 (482)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g 470 (482)
...|++.++..||++|...+.||+|+||.||+|.+++|+.||||++.....+. .++|.+|++++++++|||+|+++|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE
Confidence 45689999999999999999999999999999999999999999886544321 366999999999999999999999
Q ss_pred EEEeCC-EEEEEC
Q 036034 471 FCLHRK-CMFLIY 482 (482)
Q Consensus 471 ~~~~~~-~~~lv~ 482 (482)
||.+.+ +.+|||
T Consensus 139 yC~e~~~~~~LVY 151 (361)
T KOG1187|consen 139 YCLEGGEHRLLVY 151 (361)
T ss_pred EEecCCceEEEEE
Confidence 999998 499987
No 24
>PLN03150 hypothetical protein; Provisional
Probab=99.44 E-value=5e-13 Score=137.24 Aligned_cols=111 Identities=31% Similarity=0.500 Sum_probs=96.5
Q ss_pred CCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECC
Q 036034 215 RVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLS 294 (482)
Q Consensus 215 ~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~ 294 (482)
.++.|++++|.+.+.+|..+..+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++.+.+|..++.+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCccCCC----CCeEeccCCcCcccCCC
Q 036034 295 MNNLSGSIPKSVRK----VPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 295 ~n~l~~~~p~~~~~----l~~l~~~~n~~~~~~~~ 325 (482)
+|+++|.+|..+.. +..+++.+|...+..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 99999999987654 34678888875554443
No 25
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.35 E-value=2.7e-14 Score=135.63 Aligned_cols=174 Identities=33% Similarity=0.483 Sum_probs=108.4
Q ss_pred CCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEE
Q 036034 52 LTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLN 131 (482)
Q Consensus 52 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 131 (482)
+..-...||+.|++. .+|..++.+..|+.+.|..|.+. .+|.+++++..|++|+|+.|+++ .+|..++.++ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 444455667777766 56766666677777777777765 56677777777777777777766 4555555443 33333
Q ss_pred cccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCc
Q 036034 132 MRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIG 211 (482)
Q Consensus 132 l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 211 (482)
+++|+++ .+|..++...+|.+||.+.|.+. .+|..++.+.+|+.|++..|++. .+|.++.
T Consensus 150 -----------------~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~ 209 (722)
T KOG0532|consen 150 -----------------VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC 209 (722)
T ss_pred -----------------EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh
Confidence 3333333 45666666667777777777765 56666666777777777777665 3555555
Q ss_pred CCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCc
Q 036034 212 NLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLR 251 (482)
Q Consensus 212 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 251 (482)
.+ .|..||++.|++. .+|-.|..|..|++|-|.+|.+.
T Consensus 210 ~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 210 SL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred CC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 22 3555666666665 45666666666666666666665
No 26
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.34 E-value=1.9e-14 Score=136.65 Aligned_cols=189 Identities=30% Similarity=0.469 Sum_probs=156.5
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLD 83 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 83 (482)
++.-...||+.|.+. .+|..+..+..|+.+.|..|.+. .+|..+.++..|++|+|+.|+++ .+|..++.|+ |+.|.
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 344567889999985 78988988999999999999988 88999999999999999999998 7888888887 89999
Q ss_pred ccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccc-----cCcCEEEcccCeecccC
Q 036034 84 LSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASL-----VNLTSLSLHYNNLTGPI 158 (482)
Q Consensus 84 L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~-----~~L~~L~l~~n~~~~~~ 158 (482)
+++|+++ .+|+.++.+.+|..|+.+.|.+. .+|..++++.+|+.|+++.|++.... -.|..||++.|++. .+
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-YL 226 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCcee-ec
Confidence 9999997 78999998899999999999998 68889999999999999999876432 35678888999888 78
Q ss_pred CccCcCCCCCCEEEccCCccccCCCcCCcCCC---CCCEEeccCC
Q 036034 159 PSTLGHLNRIRILDLSENKLVGPIPSSVGHLT---QLNTLNMYSN 200 (482)
Q Consensus 159 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~---~L~~L~l~~n 200 (482)
|-.|.+|..|++|.|.+|.+. ..|..+...- =.++|+..-|
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred chhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 888999999999999999887 3444443322 2344555555
No 27
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.34 E-value=2.3e-12 Score=118.14 Aligned_cols=80 Identities=25% Similarity=0.475 Sum_probs=69.0
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
...+|...+.||+|+||.||+|+.+ ++..||||.+.+... ..+..+....|+.++++++|||||++++++.+++.+||
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 4467888888999999999999954 589999999976543 33455778899999999999999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 87 VM 88 (429)
T KOG0595|consen 87 VM 88 (429)
T ss_pred EE
Confidence 97
No 28
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.34 E-value=1.6e-14 Score=129.42 Aligned_cols=200 Identities=20% Similarity=0.198 Sum_probs=103.2
Q ss_pred ccccCCCCCCEEEccCCcccccCCc----cCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCE
Q 036034 71 LEIGNLNFLQVLDLSGNEIRGSIPS----TFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTS 146 (482)
Q Consensus 71 ~~~~~l~~L~~L~L~~n~~~~~~~~----~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~ 146 (482)
.++-..++|++|+||+|.+...-+. -+.+++.|++|+|.+|.+.......++. .|..|. .+......++|+.
T Consensus 86 ~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~kk~~~~~~Lrv 161 (382)
T KOG1909|consen 86 KALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNKKAASKPKLRV 161 (382)
T ss_pred HHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHhccCCCcceEE
Confidence 3345566788888888877544333 2445777888888888775332222221 011111 1122222334444
Q ss_pred EEcccCeecc----cCCccCcCCCCCCEEEccCCccccC----CCcCCcCCCCCCEEeccCCccccc----cCccCcCCC
Q 036034 147 LSLHYNNLTG----PIPSTLGHLNRIRILDLSENKLVGP----IPSSVGHLTQLNTLNMYSNQINGS----IPLEIGNLK 214 (482)
Q Consensus 147 L~l~~n~~~~----~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~ 214 (482)
+...+|++.. .+...+...+.|+.+.+..|.+... +...+..+++|+.|+|..|.++.. +...++.++
T Consensus 162 ~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~ 241 (382)
T KOG1909|consen 162 FICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWP 241 (382)
T ss_pred EEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccc
Confidence 4444444432 1223334445555555555554311 112344555666666666655421 233444555
Q ss_pred CCCeeeccCCcccCCCCccC-----cCCCCCCEEEcCCCcCccc----CCccccCccCCCEEeccCCcC
Q 036034 215 RVEAVKLYDNKLDGPIPPEL-----MNCSKLMELELGNNLLRGS----IPSEIGKLQELYYLDLSHNFI 274 (482)
Q Consensus 215 ~L~~L~l~~n~l~~~~~~~~-----~~~~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l 274 (482)
+|+.+++++|.+...-...+ ...|+|+.|.+.+|.++.. +...+...+.|..|+|++|.+
T Consensus 242 ~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 242 HLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred hheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 66666666665543322221 2357788888888877632 223345577888888888887
No 29
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.32 E-value=2.6e-12 Score=126.15 Aligned_cols=188 Identities=39% Similarity=0.566 Sum_probs=103.5
Q ss_pred EEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCC-CCCEEEccCCcccccCCccCcCCCCCCEEeCcCC
Q 036034 33 NLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLN-FLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQN 111 (482)
Q Consensus 33 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n 111 (482)
.+++..+.+. .....+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4666666654 22233445567777777777776 4565666663 7777777777776 45566677777777777777
Q ss_pred cccccCCccccCCCCCCEEEcccccCccc------ccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcC
Q 036034 112 KLVGPIPSSLGHLTQLTTLNMRSNLINAS------LVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSS 185 (482)
Q Consensus 112 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~------~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 185 (482)
++. .+|...+.+++|+.|++++|.+... ...|+++.+++|.+. ..+..+..+.++..+.+.+|++. ..+..
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~ 250 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPES 250 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccch
Confidence 776 3455444666666666666665421 112444444444221 23334444555555555555544 22344
Q ss_pred CcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccC
Q 036034 186 VGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDG 228 (482)
Q Consensus 186 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 228 (482)
++.++.++.|++++|+++. ++. ++.+.+++.|++++|.+..
T Consensus 251 ~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 251 IGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred hccccccceeccccccccc-ccc-ccccCccCEEeccCccccc
Confidence 4445555555555555542 221 4444555555555554443
No 30
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=2.6e-12 Score=126.24 Aligned_cols=194 Identities=35% Similarity=0.566 Sum_probs=149.2
Q ss_pred EEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCC-CCCeeecccCcceeccCccccCCCCCCEEEccCC
Q 036034 9 HLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLT-QLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN 87 (482)
Q Consensus 9 ~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 87 (482)
.+++..+.+.. ....+..++.++.|++.+|.++ .++.....++ +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 46777776632 3344555678899999999888 6666666674 8999999999987 56667888999999999999
Q ss_pred cccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc------cccCcCEEEcccCeecccCCcc
Q 036034 88 EIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA------SLVNLTSLSLHYNNLTGPIPST 161 (482)
Q Consensus 88 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~------~~~~L~~L~l~~n~~~~~~~~~ 161 (482)
++. .+|...+.++.|+.|++++|++. .+|.....+..|+++.+.+|.+.. .+.++..+.+.+|++.. .+..
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~-~~~~ 250 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLED-LPES 250 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeee-ccch
Confidence 987 56666667889999999999988 567666666778999999884322 35567777778887763 3677
Q ss_pred CcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccC
Q 036034 162 LGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEI 210 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 210 (482)
++.+..++.|++++|.++.. +. ++.+.+++.|++++|.+....+...
T Consensus 251 ~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 251 IGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hccccccceecccccccccc-cc-ccccCccCEEeccCccccccchhhh
Confidence 88889999999999999843 33 8889999999999999886555443
No 31
>PLN03150 hypothetical protein; Provisional
Probab=99.27 E-value=1.9e-11 Score=125.74 Aligned_cols=113 Identities=29% Similarity=0.510 Sum_probs=102.8
Q ss_pred CCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEecc
Q 036034 191 QLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLS 270 (482)
Q Consensus 191 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 270 (482)
.++.|+|++|.+.|.+|..++.+++|+.|++++|.+.+.+|..+..+++|+.|+|++|++++.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCccccchhhcCC-CCCCEEECCCCccccccC
Q 036034 271 HNFINGKILSELGAI-PSIDTVDLSMNNLSGSIP 303 (482)
Q Consensus 271 ~n~l~~~~~~~~~~~-~~L~~l~l~~n~l~~~~p 303 (482)
+|.+.+.+|..+... ..+..+++.+|...+..|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999888754 567889999998765443
No 32
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=1.1e-11 Score=119.51 Aligned_cols=79 Identities=24% Similarity=0.453 Sum_probs=72.3
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..|...++||+|+|+.||.++. ..|..||+|++.+.........+...+||+|.++++|||||+++++|++.++.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688999999999999999995 789999999998766666677889999999999999999999999999999999983
No 33
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.23 E-value=8.4e-12 Score=124.81 Aligned_cols=78 Identities=29% Similarity=0.548 Sum_probs=65.2
Q ss_pred hhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
..+....+.||+|.||+||+|+.. +.+.||||.++..+. .+..++|.+|+++++.++|||||+++|+|.+++
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~--~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE--NQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc--HHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 344555678999999999999842 356799999975443 345689999999999999999999999999999
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
+.+||+
T Consensus 563 P~~MvF 568 (774)
T KOG1026|consen 563 PLCMVF 568 (774)
T ss_pred eeEEEE
Confidence 999985
No 34
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.21 E-value=7.2e-12 Score=131.53 Aligned_cols=106 Identities=33% Similarity=0.437 Sum_probs=57.4
Q ss_pred CCCCEEeCcCCc--ccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEE
Q 036034 29 SKLENLHLSSNS--LVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSL 106 (482)
Q Consensus 29 ~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L 106 (482)
++|++|-+..|. +.......|..++.|+.|||++|.-.+.+|..+++|-+|++|+|++..+. .+|..++++..|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 355555555554 33233334555666666666655544455666666666666666665555 455556666666666
Q ss_pred eCcCCcccccCCccccCCCCCCEEEcccc
Q 036034 107 DLSQNKLVGPIPSSLGHLTQLTTLNMRSN 135 (482)
Q Consensus 107 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 135 (482)
++..+.-...+|.....+++|++|.+...
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred ccccccccccccchhhhcccccEEEeecc
Confidence 66555443334444445556665555443
No 35
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.20 E-value=4.7e-11 Score=117.87 Aligned_cols=75 Identities=29% Similarity=0.450 Sum_probs=63.5
Q ss_pred cccccceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
...+.++||.|.||.||+|+++- ...||||.++... ..++..+|..|+.||++++||||++|.|+.....+.+|
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEE
Confidence 34567899999999999999642 3579999997543 34566899999999999999999999999999999988
Q ss_pred E
Q 036034 481 I 481 (482)
Q Consensus 481 v 481 (482)
|
T Consensus 708 i 708 (996)
T KOG0196|consen 708 I 708 (996)
T ss_pred E
Confidence 7
No 36
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.19 E-value=1.1e-11 Score=104.47 Aligned_cols=106 Identities=31% Similarity=0.420 Sum_probs=26.7
Q ss_pred CCCCCEEeCcCCcccccCCcccc-CCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccC-cCCCCCCE
Q 036034 28 LSKLENLHLSSNSLVGNIPSTLG-HLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTF-GHLKRLKS 105 (482)
Q Consensus 28 l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l-~~l~~L~~ 105 (482)
...+++|+|++|.|+.+ ..++ .+.+|+.|++++|.|+. + ..+..+++|++|++++|.++. +.+.+ ..+++|++
T Consensus 18 ~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 18 PVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--E
T ss_pred ccccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCCc-cccchHHhCCcCCE
Confidence 33455566666555522 1233 34555566666665552 2 234555556666666666553 22223 23555666
Q ss_pred EeCcCCcccccC-CccccCCCCCCEEEcccccCc
Q 036034 106 LDLSQNKLVGPI-PSSLGHLTQLTTLNMRSNLIN 138 (482)
Q Consensus 106 L~L~~n~l~~~~-~~~l~~l~~L~~L~l~~n~i~ 138 (482)
|++++|+|...- -..++.+++|+.|++.+|++.
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 666666554321 133455566666666666654
No 37
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.18 E-value=3.3e-12 Score=112.35 Aligned_cols=133 Identities=28% Similarity=0.360 Sum_probs=103.4
Q ss_pred CCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEE
Q 036034 164 HLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMEL 243 (482)
Q Consensus 164 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 243 (482)
.++.|+.+||++|.++ .+.+++.-.|+++.|+++.|.+... ..+..+++|+.||+++|.++ .+..|-..+.+++.|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 4466788888888887 5667777778888888888888632 34777888899999998886 344566678889999
Q ss_pred EcCCCcCcccCCccccCccCCCEEeccCCcCcccc-chhhcCCCCCCEEECCCCcccccc
Q 036034 244 ELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKI-LSELGAIPSIDTVDLSMNNLSGSI 302 (482)
Q Consensus 244 ~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~l~l~~n~l~~~~ 302 (482)
.|+.|.+.. -..++++-+|..||+++|++.... ...++.+|+|+.+.+.+|++++.+
T Consensus 358 ~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 358 KLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred ehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 999998752 245677888999999999987533 345788999999999999998643
No 38
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=5.9e-11 Score=109.05 Aligned_cols=81 Identities=22% Similarity=0.400 Sum_probs=67.2
Q ss_pred HhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchh----hHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELT----SLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
..+.|...+.+|+|+||.|-+|. .++|+.||||.+++....... ....+.+|+++|.+++|||||++++++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 34567788999999999999998 567999999999765444322 2234679999999999999999999999999
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..||||
T Consensus 250 s~YmVl 255 (475)
T KOG0615|consen 250 SSYMVL 255 (475)
T ss_pred ceEEEE
Confidence 999996
No 39
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.16 E-value=2.7e-11 Score=102.14 Aligned_cols=123 Identities=32% Similarity=0.367 Sum_probs=47.4
Q ss_pred CCCCCCEEeccCCccccCCCcccC-CCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccc-cCCCCCC
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLG-RLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEI-GNLNFLQ 80 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~ 80 (482)
+..++++|+|++|.++.. +.++ .+.+|+.|+|++|.++.. . .+..++.|++|++++|.|+. ++..+ ..+++|+
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred cccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCc-cccchHHhCCcCC
Confidence 345688899999988643 4455 578899999999998843 3 47788999999999999984 44334 4588999
Q ss_pred EEEccCCccccc-CCccCcCCCCCCEEeCcCCcccccCCc----cccCCCCCCEEE
Q 036034 81 VLDLSGNEIRGS-IPSTFGHLKRLKSLDLSQNKLVGPIPS----SLGHLTQLTTLN 131 (482)
Q Consensus 81 ~L~L~~n~~~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~----~l~~l~~L~~L~ 131 (482)
+|+|++|+|... .-..++.+++|+.|+|.+|++... +. .+..+|+|+.||
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEET
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeC
Confidence 999999988642 225677788999999999988743 22 245567777665
No 40
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.16 E-value=8.3e-13 Score=118.63 Aligned_cols=242 Identities=21% Similarity=0.254 Sum_probs=164.1
Q ss_pred ccCCCCCCeeecccCcceec----cCccccCCCCCCEEEccCCc---ccccCCc-------cCcCCCCCCEEeCcCCccc
Q 036034 49 LGHLTQLTTLAIASNHINVS----IPLEIGNLNFLQVLDLSGNE---IRGSIPS-------TFGHLKRLKSLDLSQNKLV 114 (482)
Q Consensus 49 ~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~---~~~~~~~-------~l~~l~~L~~L~L~~n~l~ 114 (482)
+..+..+++|+|++|.+... +...+.+.++|+..++++-- ....+|+ ++...++|+.|+||+|-+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 33455666666666666532 23344556667777666432 1122333 3445678999999999887
Q ss_pred ccCCcc----ccCCCCCCEEEcccccCccc-----ccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCC---
Q 036034 115 GPIPSS----LGHLTQLTTLNMRSNLINAS-----LVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPI--- 182 (482)
Q Consensus 115 ~~~~~~----l~~l~~L~~L~l~~n~i~~~-----~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~--- 182 (482)
...+.. +..+..|++|.|.+|.+... -..|..|. . ......-+.|+.+....|++....
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~--~-------~kk~~~~~~Lrv~i~~rNrlen~ga~~ 176 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELA--V-------NKKAASKPKLRVFICGRNRLENGGATA 176 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHH--H-------HhccCCCcceEEEEeeccccccccHHH
Confidence 555544 35677788888887776521 01122222 1 112334577999999999986432
Q ss_pred -CcCCcCCCCCCEEeccCCccccc----cCccCcCCCCCCeeeccCCcccCC----CCccCcCCCCCCEEEcCCCcCccc
Q 036034 183 -PSSVGHLTQLNTLNMYSNQINGS----IPLEIGNLKRVEAVKLYDNKLDGP----IPPELMNCSKLMELELGNNLLRGS 253 (482)
Q Consensus 183 -~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~~~ 253 (482)
...+...+.|+.+.++.|.+... +...+..+++|+.||+++|-|+.. +...+..+++|+.|++++|.+...
T Consensus 177 ~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~ 256 (382)
T KOG1909|consen 177 LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENE 256 (382)
T ss_pred HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccc
Confidence 23566778999999999987532 345567899999999999998743 345677889999999999998755
Q ss_pred CCccc-----cCccCCCEEeccCCcCcccc----chhhcCCCCCCEEECCCCccc
Q 036034 254 IPSEI-----GKLQELYYLDLSHNFINGKI----LSELGAIPSIDTVDLSMNNLS 299 (482)
Q Consensus 254 ~~~~~-----~~~~~L~~L~l~~n~l~~~~----~~~~~~~~~L~~l~l~~n~l~ 299 (482)
....+ ...|.|+.|.+.+|.++... ...+...|.|..|++++|.+.
T Consensus 257 Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 257 GAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 43333 34789999999999987432 223456899999999999984
No 41
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.16 E-value=5e-11 Score=115.08 Aligned_cols=79 Identities=27% Similarity=0.547 Sum_probs=64.4
Q ss_pred hcccccceeCccCcEEEEEEEcCC--C---CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS--G---KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~--~---~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
++....+.||+|.||.||+|++.. + ..||||..+..........++|++|+++|..++|||||+++|++..++++
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344456889999999999999643 2 23899988643333445678999999999999999999999999999999
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
||||
T Consensus 237 ~ivm 240 (474)
T KOG0194|consen 237 MLVM 240 (474)
T ss_pred EEEE
Confidence 9986
No 42
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.16 E-value=5e-12 Score=111.28 Aligned_cols=207 Identities=24% Similarity=0.230 Sum_probs=110.2
Q ss_pred CCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC-cccccCCccCc
Q 036034 20 YIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN-EIRGSIPSTFG 98 (482)
Q Consensus 20 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n-~~~~~~~~~l~ 98 (482)
.+|-.+.-+++|..+.++.|.-.. +.+-...-|.|+++......+.. .| .+-....+....-+.- -..|.....+.
T Consensus 205 ~l~f~l~~f~~l~~~~~s~~~~~~-i~~~~~~kptl~t~~v~~s~~~~-~~-~l~pe~~~~D~~~~E~~t~~G~~~~~~d 281 (490)
T KOG1259|consen 205 RLSFNLNAFRNLKTLKFSALSTEN-IVDIELLKPTLQTICVHNTTIQD-VP-SLLPETILADPSGSEPSTSNGSALVSAD 281 (490)
T ss_pred ccccchHHhhhhheeeeeccchhh-eeceeecCchhheeeeecccccc-cc-cccchhhhcCccCCCCCccCCceEEecc
Confidence 345555566777777777765442 22222234667777776555432 11 1111222222111111 11222222233
Q ss_pred CCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCcc
Q 036034 99 HLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKL 178 (482)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l 178 (482)
....|++|+|++|.|+ .+.++..-.|.++.|+++.|.+ .. -+.+..+++|+.|||++|.+
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i-----------------~~--v~nLa~L~~L~~LDLS~N~L 341 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRI-----------------RT--VQNLAELPQLQLLDLSGNLL 341 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccce-----------------ee--ehhhhhcccceEeecccchh
Confidence 3445667777777665 3444544445555554444433 21 12255566666667766666
Q ss_pred ccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCC-CCccCcCCCCCCEEEcCCCcCcc
Q 036034 179 VGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGP-IPPELMNCSKLMELELGNNLLRG 252 (482)
Q Consensus 179 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~l~~n~l~~ 252 (482)
+ ....+-..+.+++.|.|++|.+.. -..++.+.+|..||+++|++... -...++++|.|+.+.|.+|.+.+
T Consensus 342 s-~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 342 A-ECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred H-hhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 5 233344455666677777776642 23455666777777777776532 12356788888888888888874
No 43
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.15 E-value=3.7e-11 Score=114.27 Aligned_cols=75 Identities=25% Similarity=0.601 Sum_probs=64.9
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.+...+.||+|.||.||.|.|.....||+|.++..... .++|.+|+++|.+++|+|||+++|+|..++++||||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 345557789999999999999977779999999754332 378999999999999999999999999999999985
No 44
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=6.6e-12 Score=116.04 Aligned_cols=151 Identities=27% Similarity=0.296 Sum_probs=76.4
Q ss_pred CCCCCCeeecccCcceeccC--ccccCCCCCCEEEccCCcccc--cCCccCcCCCCCCEEeCcCCcccccCCccc-cCCC
Q 036034 51 HLTQLTTLAIASNHINVSIP--LEIGNLNFLQVLDLSGNEIRG--SIPSTFGHLKRLKSLDLSQNKLVGPIPSSL-GHLT 125 (482)
Q Consensus 51 ~l~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~L~~n~~~~--~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l-~~l~ 125 (482)
++.+|+.+.|+++.+.. .+ .....|++++.|||+.|-+.. .+..-...+++|+.|+|+.|++........ ..++
T Consensus 119 n~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 34555666666555541 22 234455666666666665542 122233456666666666666542221111 1345
Q ss_pred CCCEEEcccccCcc--------cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCC--cCCcCCCCCCEE
Q 036034 126 QLTTLNMRSNLINA--------SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIP--SSVGHLTQLNTL 195 (482)
Q Consensus 126 ~L~~L~l~~n~i~~--------~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L 195 (482)
.|+.|.++.|.++. .+|+|+.|++..|............+..|+.|||++|++.. ++ ...+.++.|+.|
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhh
Confidence 55555555555542 25555666665553222222233345566677777666642 22 234556666666
Q ss_pred eccCCccc
Q 036034 196 NMYSNQIN 203 (482)
Q Consensus 196 ~l~~n~l~ 203 (482)
+++.+.+.
T Consensus 277 nls~tgi~ 284 (505)
T KOG3207|consen 277 NLSSTGIA 284 (505)
T ss_pred hccccCcc
Confidence 66666554
No 45
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=6.8e-11 Score=111.37 Aligned_cols=78 Identities=32% Similarity=0.558 Sum_probs=64.9
Q ss_pred hcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCMFL 480 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~l 480 (482)
+.|+....||+|+||.||+|+ ..+|+.||+|++..+... .+...-..+||.|+++++|||||++.|...++ ..+||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 456667789999999999999 668999999999765432 23445568999999999999999999999887 67888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
|+
T Consensus 196 VF 197 (560)
T KOG0600|consen 196 VF 197 (560)
T ss_pred EE
Confidence 85
No 46
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=4.8e-12 Score=116.89 Aligned_cols=202 Identities=23% Similarity=0.225 Sum_probs=125.4
Q ss_pred CCCCCCCEEeCcCCcccccCC-ccccCCCCCCeeecccCcceec--cCccccCCCCCCEEEccCCcccccCCccC-cCCC
Q 036034 26 GRLSKLENLHLSSNSLVGNIP-STLGHLTQLTTLAIASNHINVS--IPLEIGNLNFLQVLDLSGNEIRGSIPSTF-GHLK 101 (482)
Q Consensus 26 ~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~L~~n~~~~~~~~~l-~~l~ 101 (482)
.++++|+.+.|.++.+..... .....+++++.|||+.|-+... +-.....|++|+.|+|+.|++........ ..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 346677788888777662221 3456678888888888776642 22334567788888888887753221111 2466
Q ss_pred CCCEEeCcCCccccc-CCccccCCCCCCEEEccccc-Cc------ccccCcCEEEcccCeeccc-CCccCcCCCCCCEEE
Q 036034 102 RLKSLDLSQNKLVGP-IPSSLGHLTQLTTLNMRSNL-IN------ASLVNLTSLSLHYNNLTGP-IPSTLGHLNRIRILD 172 (482)
Q Consensus 102 ~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~-i~------~~~~~L~~L~l~~n~~~~~-~~~~~~~l~~L~~L~ 172 (482)
+|+.|.|+.|+++.. +-..+..+|+|+.|++..|. +. ..+..|++|+|++|++... .-...+.++.|..|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 788888888887632 11234567888888888884 22 2366788889988887632 124567789999999
Q ss_pred ccCCccccC-CCcC-----CcCCCCCCEEeccCCcccc-ccCccCcCCCCCCeeeccCCccc
Q 036034 173 LSENKLVGP-IPSS-----VGHLTQLNTLNMYSNQING-SIPLEIGNLKRVEAVKLYDNKLD 227 (482)
Q Consensus 173 l~~n~l~~~-~~~~-----~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~ 227 (482)
++.+.+... +|+. ...+++|++|++..|++.. .....+..+++|+.|.+..|.++
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 999988642 2222 2345777777777777642 11223334445555555555554
No 47
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.13 E-value=1e-10 Score=111.11 Aligned_cols=76 Identities=32% Similarity=0.647 Sum_probs=61.3
Q ss_pred ccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-EEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-CMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ 482 (482)
+...+.+|+|+||+||+|.|.....||||++......... .++|.+|+.+|.+++|||||+++|+|.+.. ...|||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 3344559999999999999964444999999754433322 679999999999999999999999999987 677774
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=1.7e-11 Score=104.65 Aligned_cols=81 Identities=36% Similarity=0.554 Sum_probs=69.1
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
+.++|+..+.+|+|.||.||.|+. +++-.||+|++.+......+-.+++.+|++|-+.++||||.+++|++.+....||
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 346788999999999999999995 4678899999976544444445789999999999999999999999999999998
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
++
T Consensus 100 il 101 (281)
T KOG0580|consen 100 IL 101 (281)
T ss_pred EE
Confidence 74
No 49
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.12 E-value=3e-11 Score=126.93 Aligned_cols=105 Identities=31% Similarity=0.407 Sum_probs=52.3
Q ss_pred CCCEEeccCCc--cccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEE
Q 036034 6 NLVHLDLSDNY--LWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLD 83 (482)
Q Consensus 6 ~L~~L~l~~n~--~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 83 (482)
+|++|-+.+|. +.....+.|..++.|++|||++|.-.+.+|..++.+-+||+|+++++.+. .+|..+.+|+.|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555543 22222333445555555555555444455555555555555555555554 4555555555555555
Q ss_pred ccCCcccccCCccCcCCCCCCEEeCcCC
Q 036034 84 LSGNEIRGSIPSTFGHLKRLKSLDLSQN 111 (482)
Q Consensus 84 L~~n~~~~~~~~~l~~l~~L~~L~L~~n 111 (482)
+..+.....+|.....+++|++|.+...
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred cccccccccccchhhhcccccEEEeecc
Confidence 5555433333444444555555555443
No 50
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.12 E-value=2.6e-11 Score=110.97 Aligned_cols=79 Identities=23% Similarity=0.457 Sum_probs=72.3
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..|+..+.+|+|+||+|-+++- ..|+.||||.+++++..+.++.-.+.+||+||+.++||||++++.+|...+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4577778899999999999984 679999999999888888888888999999999999999999999999999999997
No 51
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.05 E-value=1.2e-10 Score=111.19 Aligned_cols=77 Identities=29% Similarity=0.532 Sum_probs=66.4
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+.... .+..+...+|++|+++++|||||.+++.|++..+.++|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 46777888999999999999954 5889999999765433 34567799999999999999999999999999999887
No 52
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04 E-value=1.8e-11 Score=106.81 Aligned_cols=79 Identities=30% Similarity=0.527 Sum_probs=64.1
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeE-EEEeCCE-EE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYG-FCLHRKC-MF 479 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g-~~~~~~~-~~ 479 (482)
..+|.+.++||+|+||+|||++ +.+|..+|.|.++. ...+.+..++...|+.++++++|||||++++ -+.+..+ ++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f-~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF-GMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch-hhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 3457788899999999999999 67899999999984 4456667789999999999999999999998 4444433 45
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
|||
T Consensus 97 ivm 99 (375)
T KOG0591|consen 97 IVM 99 (375)
T ss_pred HHH
Confidence 543
No 53
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.04 E-value=2.7e-11 Score=119.14 Aligned_cols=241 Identities=31% Similarity=0.356 Sum_probs=115.5
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
.++.++++.|.+.. +-..+..+.+|+.|++.+|++. .+...+..+++|++|++++|.|+.. ..+..++.|+.|+++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccc--cchhhccchhhheec
Confidence 33444444444432 2233444555555555555555 2222244455555555555555432 123444445555555
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCC-ccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcC
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIP-SSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGH 164 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~ 164 (482)
+|.+... ..+..++.|+.+++++|++...-+ . ...+.++ +.+++.+|.+.. ...+..
T Consensus 149 ~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l-----------------~~l~l~~n~i~~--i~~~~~ 206 (414)
T KOG0531|consen 149 GNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISL-----------------EELDLGGNSIRE--IEGLDL 206 (414)
T ss_pred cCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccch-----------------HHHhccCCchhc--ccchHH
Confidence 5555421 223335555555555555543222 1 2334444 444445554441 122333
Q ss_pred CCCCCEEEccCCccccCCCcCCcCCCC--CCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCE
Q 036034 165 LNRIRILDLSENKLVGPIPSSVGHLTQ--LNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLME 242 (482)
Q Consensus 165 l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 242 (482)
+..+..+++..|.++... .+..+.. |+.+++++|.+. ..+..+..+..+..+++..|++...- .+...+.+..
T Consensus 207 ~~~l~~~~l~~n~i~~~~--~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~ 281 (414)
T KOG0531|consen 207 LKKLVLLSLLDNKISKLE--GLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSE 281 (414)
T ss_pred HHHHHHhhcccccceecc--CcccchhHHHHHHhcccCccc-cccccccccccccccchhhccccccc--cccccchHHH
Confidence 344444466666655321 1222222 666667776665 22245555666677777766665321 1233444555
Q ss_pred EEcCCCcCccc---CCcc-ccCccCCCEEeccCCcCccc
Q 036034 243 LELGNNLLRGS---IPSE-IGKLQELYYLDLSHNFINGK 277 (482)
Q Consensus 243 L~l~~n~l~~~---~~~~-~~~~~~L~~L~l~~n~l~~~ 277 (482)
+....|.+... .... .+..+.+..+.+..|+....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 282 LWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred hccCcchhcchhhhhccccccccccccccccccCccccc
Confidence 55555554321 1111 34566777777777776643
No 54
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.03 E-value=2.2e-10 Score=109.65 Aligned_cols=76 Identities=29% Similarity=0.491 Sum_probs=65.5
Q ss_pred cccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.....+.||+|.||+|..++...+..||||.++..... ..+.+|.+||++|++++|||||+++|+|..++++.+|+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~--~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK--NARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccch--hHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 34556789999999999999887899999999865433 34589999999999999999999999999999887763
No 55
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.03 E-value=1.3e-10 Score=102.68 Aligned_cols=77 Identities=27% Similarity=0.480 Sum_probs=63.3
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.|+....+|+|+||.|||++.+ +|+.||||++..... +..-.+--.+||+++++++|||+|.++++|..+..++||+
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-DPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCc-cHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 4666778999999999999954 599999999854322 2222345689999999999999999999999999999985
No 56
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.01 E-value=4e-10 Score=102.54 Aligned_cols=81 Identities=30% Similarity=0.493 Sum_probs=72.5
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|+..++||+|+||+||.++. ..++.+|+|++++.+..+.+..+....|..|+.+++||.||++...+.+++.+|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 357899999999999999999995 4599999999987776666677889999999999999999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
|+
T Consensus 103 Vl 104 (357)
T KOG0598|consen 103 VL 104 (357)
T ss_pred EE
Confidence 84
No 57
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.00 E-value=6.6e-10 Score=99.55 Aligned_cols=81 Identities=27% Similarity=0.427 Sum_probs=65.7
Q ss_pred HHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KC 477 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~ 477 (482)
+..++|+..+.|++|+||.||+|+. ++++.||+|+++..+..+... ---.+||.++.+++|||||.+..+.... +.
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFP-ItsLREIniLl~~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFP-ITSLREINILLKARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCc-chhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence 4556788899999999999999994 468899999998765433222 2357899999999999999999988764 67
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
+||||
T Consensus 152 iy~VM 156 (419)
T KOG0663|consen 152 IYIVM 156 (419)
T ss_pred eeeeH
Confidence 99987
No 58
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.00 E-value=4.9e-10 Score=97.29 Aligned_cols=78 Identities=28% Similarity=0.525 Sum_probs=63.7
Q ss_pred hcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..|...+.+|+|.||.||+|+ ..+|+.||+|+++.....+.- ...-.+||+.+.+++||||+.++++|-..+...||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi-~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI-NRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc-cHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 356777889999999999999 567999999999754333221 234678999999999999999999999988887774
No 59
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.99 E-value=4.1e-10 Score=78.08 Aligned_cols=57 Identities=39% Similarity=0.526 Sum_probs=24.2
Q ss_pred CCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC
Q 036034 31 LENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN 87 (482)
Q Consensus 31 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 87 (482)
|++|++++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 444444444444333334444444444444444444333334444444444444444
No 60
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.99 E-value=3.1e-10 Score=78.73 Aligned_cols=61 Identities=36% Similarity=0.519 Sum_probs=57.2
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHI 65 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 65 (482)
++|++|++++|+++...++.|..+++|++|++++|+++...+..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 6899999999999877778999999999999999999988889999999999999999975
No 61
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.98 E-value=4.5e-11 Score=117.64 Aligned_cols=218 Identities=33% Similarity=0.406 Sum_probs=118.0
Q ss_pred CCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEE
Q 036034 51 HLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTL 130 (482)
Q Consensus 51 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 130 (482)
.+..++.++++.|.+.. .-..+..+++|+.|++.+|.|.. +...+..+++|++|++++|.|+.. ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 45556666666666652 23345666777777777777763 322255667777777777776643 334445555555
Q ss_pred EcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCC-cCCcCCCCCCEEeccCCccccccCcc
Q 036034 131 NMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIP-SSVGHLTQLNTLNMYSNQINGSIPLE 209 (482)
Q Consensus 131 ~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~ 209 (482)
++.+|.|.. ...+..+..|+.+++++|.+....+ . ...+.+++.+.+.+|.+.. ...
T Consensus 146 ~l~~N~i~~-------------------~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~ 203 (414)
T KOG0531|consen 146 NLSGNLISD-------------------ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEG 203 (414)
T ss_pred eeccCcchh-------------------ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccc
Confidence 555555432 1223335666666666666653322 1 3555666666666666542 223
Q ss_pred CcCCCCCCeeeccCCcccCCCCccCcCCC--CCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCC
Q 036034 210 IGNLKRVEAVKLYDNKLDGPIPPELMNCS--KLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPS 287 (482)
Q Consensus 210 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~--~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~ 287 (482)
+..+..+..+++..|.+...-+ +..+. .|+.+++++|.+. ..+..+..+..+..+++.+|++... ..+...+.
T Consensus 204 ~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~ 278 (414)
T KOG0531|consen 204 LDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPK 278 (414)
T ss_pred hHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccch
Confidence 3333444444566665542211 11122 3677777777765 3334556667777777777776532 22333344
Q ss_pred CCEEECCCCccc
Q 036034 288 IDTVDLSMNNLS 299 (482)
Q Consensus 288 L~~l~l~~n~l~ 299 (482)
+..+....|.+.
T Consensus 279 ~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 279 LSELWLNDNKLA 290 (414)
T ss_pred HHHhccCcchhc
Confidence 555555555554
No 62
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.93 E-value=1.2e-09 Score=105.33 Aligned_cols=84 Identities=29% Similarity=0.526 Sum_probs=69.4
Q ss_pred ccHHHHHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEE
Q 036034 394 ITFQDIIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCL 473 (482)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 473 (482)
.+.+++....+.+.....||+|.||+||+|+|. ..||||.++.+.... .+.+.|++|+..+++-||.||+=+.|||.
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~-~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTP-EQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCH-HHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 344566666777778889999999999999984 359999998655544 36789999999999999999999999999
Q ss_pred eCCEEEEE
Q 036034 474 HRKCMFLI 481 (482)
Q Consensus 474 ~~~~~~lv 481 (482)
.++. +||
T Consensus 459 ~p~~-AIi 465 (678)
T KOG0193|consen 459 NPPL-AII 465 (678)
T ss_pred CCce-eee
Confidence 8877 454
No 63
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.93 E-value=4e-10 Score=108.67 Aligned_cols=81 Identities=30% Similarity=0.535 Sum_probs=69.4
Q ss_pred HHHHHHhhcccccceeCccCcEEEEEEEcCC-CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 397 QDIIEATEDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 397 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
++++-...+..+.+++|-|.||.||.|.|+. .-.||||.++.+.+ ..++|..|+.+|+.++|||+|+++|+|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 4555556678888999999999999999865 55799999975433 458999999999999999999999999999
Q ss_pred CEEEEE
Q 036034 476 KCMFLI 481 (482)
Q Consensus 476 ~~~~lv 481 (482)
.+.|||
T Consensus 336 pPFYIi 341 (1157)
T KOG4278|consen 336 PPFYII 341 (1157)
T ss_pred CCeEEE
Confidence 999997
No 64
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.92 E-value=1.8e-09 Score=102.75 Aligned_cols=81 Identities=30% Similarity=0.486 Sum_probs=74.5
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|+....||+|+||.||.++.+ +|..+|+|++++.......+++.+..|-.+|...++|+||+++..|.+.+++||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4678999999999999999999954 599999999988777777788899999999999999999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 219 iM 220 (550)
T KOG0605|consen 219 IM 220 (550)
T ss_pred EE
Confidence 97
No 65
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.91 E-value=4.6e-09 Score=98.46 Aligned_cols=69 Identities=28% Similarity=0.515 Sum_probs=54.2
Q ss_pred ccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHh--cCCCCCccceeEEEEeCC----EEE
Q 036034 406 FHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLS--QIRHRNIVKLYGFCLHRK----CMF 479 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~~~----~~~ 479 (482)
......||+|.||.||||++. ++.||||++... ..+.|..|-+|.+ .++|+||++|+++-...+ +.+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 344567999999999999984 699999998642 3367888888887 458999999999866554 555
Q ss_pred EE
Q 036034 480 LI 481 (482)
Q Consensus 480 lv 481 (482)
||
T Consensus 285 LV 286 (534)
T KOG3653|consen 285 LV 286 (534)
T ss_pred EE
Confidence 55
No 66
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.91 E-value=3.3e-09 Score=103.72 Aligned_cols=78 Identities=18% Similarity=0.296 Sum_probs=66.5
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.|...+.||+|+||+||+|+. .+++.+|+|++...........+.+.+|++++.+++|||||++++++.+.+..|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 477788999999999999984 468899999996544333344567999999999999999999999999999999986
No 67
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.90 E-value=3.9e-09 Score=101.06 Aligned_cols=79 Identities=22% Similarity=0.389 Sum_probs=67.5
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.. +++.||+|.+...........+.+.+|++++.+++|||||++++++.+++..|+||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888899999999999999964 58899999986543333344567899999999999999999999999999999886
No 68
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.89 E-value=4.1e-09 Score=102.48 Aligned_cols=79 Identities=29% Similarity=0.445 Sum_probs=66.8
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+|+. .+|+.||||++...........+.+.+|++++..++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 3688889999999999999995 468999999996543333334567889999999999999999999999999999986
No 69
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.89 E-value=4e-09 Score=103.01 Aligned_cols=79 Identities=29% Similarity=0.426 Sum_probs=66.7
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+++. .+++.||+|++...........+.+.+|++++.+++|||||++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3678889999999999999984 468999999986543333334567899999999999999999999999999999986
No 70
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.87 E-value=4.5e-09 Score=98.56 Aligned_cols=83 Identities=28% Similarity=0.413 Sum_probs=66.7
Q ss_pred HHHhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchh-----------hHHHHHHHHHHHhcCCCCCccc
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELT-----------SLESFRNKARLLSQIRHRNIVK 467 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~-----------~~~~~~~e~~~l~~l~H~niv~ 467 (482)
....+.|+....||+|.||.|-+|+ ..+++.||+|++.+.+..... ..+...+||.||++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 3456789999999999999999999 446999999999654322211 2357899999999999999999
Q ss_pred eeEEEEeC--CEEEEEC
Q 036034 468 LYGFCLHR--KCMFLIY 482 (482)
Q Consensus 468 l~g~~~~~--~~~~lv~ 482 (482)
++++-.+. +.+|||+
T Consensus 173 LiEvLDDP~s~~~YlVl 189 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVL 189 (576)
T ss_pred EEEeecCcccCceEEEE
Confidence 99998774 6788874
No 71
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.87 E-value=5.9e-09 Score=100.02 Aligned_cols=81 Identities=27% Similarity=0.418 Sum_probs=69.9
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~ 479 (482)
....|...+.+|+|.||.||+++.+ +|+.+|+|.+.+.........+.+.+|+++|.++. |||||.+++.|.+.+..+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3456777889999999999999955 49999999997665554445678999999999998 999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 113 lvm 115 (382)
T KOG0032|consen 113 LVM 115 (382)
T ss_pred EEE
Confidence 986
No 72
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.86 E-value=6.3e-09 Score=101.86 Aligned_cols=78 Identities=18% Similarity=0.309 Sum_probs=66.4
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.|...+.||+|+||.||+|+. .+++.+|+|.+...........+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 477889999999999999994 468899999986543333344567899999999999999999999999999999986
No 73
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=98.84 E-value=3.6e-09 Score=99.46 Aligned_cols=78 Identities=24% Similarity=0.381 Sum_probs=65.8
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||+|+.. +++.+|+|++...........+.+.+|++++.+++||||+++++++.+.+..|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 5778899999999999999954 68999999986543333334567899999999999999999999999999998885
No 74
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.84 E-value=8.4e-09 Score=98.99 Aligned_cols=79 Identities=28% Similarity=0.468 Sum_probs=66.7
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.. +++.||+|++...........+.+.+|++++..++|||||++++++.+.+..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36788899999999999999965 58899999996543333334567899999999999999999999999999999986
No 75
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.84 E-value=8.2e-09 Score=100.84 Aligned_cols=79 Identities=19% Similarity=0.305 Sum_probs=66.4
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+++. .+++.||+|.+...........+.+.+|++++.+++||||+++++.+.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688889999999999999994 468999999986433322334567889999999999999999999999999999986
No 76
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.83 E-value=1.7e-08 Score=94.01 Aligned_cols=63 Identities=25% Similarity=0.467 Sum_probs=51.0
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC--CCCCccceeEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQI--RHRNIVKLYGFC 472 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l--~H~niv~l~g~~ 472 (482)
.......+.||+|.||.||+|.|+ |..||||++.... ...+.+|.+|.... ||+||..|++.=
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD 274 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAAD 274 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhcc
Confidence 356677889999999999999994 8899999985432 15678889888854 999999988753
No 77
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.83 E-value=3.3e-09 Score=86.64 Aligned_cols=76 Identities=30% Similarity=0.508 Sum_probs=61.1
Q ss_pred ccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|+..+.||+|+||+|++|+ +..++.||+|++.-+...+ +--..-.+||-++++++|.|||++++...++...-+|+
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrldddde-gvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC-CCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 4556779999999999999 5568999999986544332 22245678999999999999999999998888877774
No 78
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.82 E-value=9.5e-09 Score=98.71 Aligned_cols=80 Identities=26% Similarity=0.418 Sum_probs=66.2
Q ss_pred hhcccccceeCccCcEEEEEEEcCC--CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPS--GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~--~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
.++|...+.||+|+||.||+|+... +..||+|++...........+.+.+|++++..++|||||++++++.+.+..|+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3568889999999999999998543 36899999865433333445678999999999999999999999999999998
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 109 v~ 110 (340)
T PTZ00426 109 VL 110 (340)
T ss_pred EE
Confidence 86
No 79
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=98.81 E-value=1e-08 Score=96.06 Aligned_cols=77 Identities=23% Similarity=0.373 Sum_probs=64.1
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|+..+.||+|+||.||++.. .+++.||+|.+.............+.+|+.++++++|||||++++++.+++..++||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 66788999999999999995 468999999986543333333456888999999999999999999999999988886
No 80
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=1.5e-08 Score=94.47 Aligned_cols=78 Identities=27% Similarity=0.503 Sum_probs=69.2
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|+....||.|..++||+|+ .+.+..||||+++-++.++ ..+...+|+..|+-++|||||+++..|..+.++|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 3678889999999999999999 6678999999997655544 357889999999999999999999999999999999
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 103 m 103 (516)
T KOG0582|consen 103 M 103 (516)
T ss_pred e
Confidence 7
No 81
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=98.81 E-value=1.2e-08 Score=95.70 Aligned_cols=77 Identities=25% Similarity=0.386 Sum_probs=64.0
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||+|+||.||+|.. .+|+.||+|.+.............+.+|++++.+++|+||+++.+++.+.+..++||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence 66678899999999999995 578999999986543333333456889999999999999999999999999888875
No 82
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.81 E-value=1.1e-08 Score=94.12 Aligned_cols=75 Identities=24% Similarity=0.512 Sum_probs=64.4
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+|++.++..+|+|.+..... ..++|.+|++++.+++||||++++++|.+++..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 46778889999999999999988788899998764322 2367899999999999999999999999998888885
No 83
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.80 E-value=1.1e-08 Score=99.39 Aligned_cols=82 Identities=23% Similarity=0.336 Sum_probs=68.1
Q ss_pred HHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
...++|+..+.||+|+||.||+++.. +++.+|+|.+...........+.+.+|+.+++.++|||||++++++.+++..|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34577889999999999999999954 58899999986433333334466889999999999999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 120 lv~ 122 (370)
T cd05621 120 MVM 122 (370)
T ss_pred EEE
Confidence 986
No 84
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.80 E-value=9.3e-09 Score=100.03 Aligned_cols=81 Identities=25% Similarity=0.338 Sum_probs=67.7
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|+..+.||+|+||.||+++. .+++.+|+|.+...........+.+.+|+++++.++||||+++++++.+++..|+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 456788999999999999999995 4688999999865333333344568899999999999999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 121 v~ 122 (370)
T cd05596 121 VM 122 (370)
T ss_pred EE
Confidence 86
No 85
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=98.80 E-value=7.3e-09 Score=91.50 Aligned_cols=79 Identities=30% Similarity=0.494 Sum_probs=71.8
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+|+..+.+|.|+||+|..++.+ +|..+|+|++++.+..+.++.+...+|..+++.+.||.+|++.+.|.+.+.+||||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46777889999999999999954 68899999998877777788889999999999999999999999999999999997
No 86
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.79 E-value=1.4e-08 Score=98.74 Aligned_cols=79 Identities=25% Similarity=0.375 Sum_probs=66.5
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||+||+++. .+++.+|+|++...........+.+.+|++++.+++|||||++++++.+.+..|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 3688889999999999999985 468999999996543333334567889999999999999999999999999999986
No 87
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.79 E-value=8.1e-09 Score=107.66 Aligned_cols=77 Identities=29% Similarity=0.526 Sum_probs=62.8
Q ss_pred hcccccceeCccCcEEEEEEEcCC--CC----EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS--GK----VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~--~~----~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
...+..+.||+|.||.||+|++.+ |. .||||.+.+.. +.+...+|.+|+.+|+.++|||||+++|+|.+...
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 345567889999999999999643 32 48999987543 34556899999999999999999999999999877
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.+|++
T Consensus 770 ~~i~l 774 (1025)
T KOG1095|consen 770 PLILL 774 (1025)
T ss_pred cEEEe
Confidence 77763
No 88
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.79 E-value=5.7e-09 Score=104.05 Aligned_cols=68 Identities=25% Similarity=0.478 Sum_probs=55.4
Q ss_pred cccceeCccCcEEEEEEEc-CCC----CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 407 HIKYCIGTGGYGSVYRARL-PSG----KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 407 ~~~~~ig~g~~g~v~~~~~-~~~----~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
..+++||+|.||+||+|.| +.| .+||+|++.... ..+..++|.+|+-+|++++|||+++++|+|....
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~ 771 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLDHPNLLRLLGVCMLST 771 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch
Confidence 3467899999999999984 443 478999986433 3345588999999999999999999999998765
No 89
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=98.79 E-value=1.6e-08 Score=95.70 Aligned_cols=77 Identities=23% Similarity=0.443 Sum_probs=62.8
Q ss_pred hcccccceeCccCcEEEEEEEcCC-----------------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCcc
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS-----------------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIV 466 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~-----------------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv 466 (482)
++|...+.||+|+||.||++.+.+ +..||+|.+.... .....++|.+|++++.+++|||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCee
Confidence 467788899999999999997532 3369999986432 222346799999999999999999
Q ss_pred ceeEEEEeCCEEEEEC
Q 036034 467 KLYGFCLHRKCMFLIY 482 (482)
Q Consensus 467 ~l~g~~~~~~~~~lv~ 482 (482)
++++++.+.+..++||
T Consensus 83 ~~~~~~~~~~~~~lv~ 98 (304)
T cd05096 83 RLLGVCVDEDPLCMIT 98 (304)
T ss_pred EEEEEEecCCceEEEE
Confidence 9999999988888875
No 90
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=98.79 E-value=1.3e-08 Score=94.30 Aligned_cols=78 Identities=27% Similarity=0.403 Sum_probs=64.4
Q ss_pred hhcccccceeCccCcEEEEEEEcC----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.++|...+.||+|+||.||+|++. .+..||+|.++.... ......|.+|+..+.+++|||||+++|++..++..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 356888899999999999999853 356899999864322 23346799999999999999999999999999999
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 82 ~lv~ 85 (266)
T cd05064 82 MIVT 85 (266)
T ss_pred EEEE
Confidence 8886
No 91
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.79 E-value=1.1e-08 Score=97.00 Aligned_cols=73 Identities=23% Similarity=0.418 Sum_probs=63.9
Q ss_pred cceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 409 KYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++++|+|.||+||-|+. ++|+.||||++++.+.... +.....+|++|+.+++||.||.+.-.|++.+..+.||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM 642 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM 642 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence 57899999999999994 5799999999986554433 3367899999999999999999999999999999997
No 92
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.79 E-value=2.2e-08 Score=92.73 Aligned_cols=79 Identities=28% Similarity=0.422 Sum_probs=66.6
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+|+. .+++.+|+|.+......+......|.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4688889999999999999995 468999999886544334444567999999999999999999999999988888875
No 93
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.78 E-value=2.1e-08 Score=105.05 Aligned_cols=79 Identities=28% Similarity=0.445 Sum_probs=67.2
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+. .+|+.||+|++...........+.|.+|++++++++|||||++++++.+.+..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4688889999999999999995 458999999996543333334567999999999999999999999999999998886
No 94
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.78 E-value=1.6e-08 Score=96.81 Aligned_cols=79 Identities=27% Similarity=0.389 Sum_probs=66.4
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+++. .+++.||+|.+.+.........+.|.+|+.++..++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 3688889999999999999995 468999999986533333334567899999999999999999999999999999986
No 95
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=98.78 E-value=1.4e-08 Score=99.52 Aligned_cols=79 Identities=20% Similarity=0.396 Sum_probs=64.4
Q ss_pred HhhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEe
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLH 474 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~ 474 (482)
..++|...+.||+|+||.||+|+.. .+..||||+++.... ....+.|.+|++++++++ |||||+++|+|.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR--SSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 4567888899999999999999842 134699999964322 233467999999999996 9999999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
.+..||||
T Consensus 113 ~~~~~lv~ 120 (400)
T cd05105 113 SGPIYIIT 120 (400)
T ss_pred CCceEEEE
Confidence 99999986
No 96
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.77 E-value=2.2e-08 Score=93.93 Aligned_cols=77 Identities=26% Similarity=0.475 Sum_probs=64.1
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.. +++.||+|.++..... .....+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 46888899999999999999854 6889999998643221 22356789999999999999999999999998888885
No 97
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.77 E-value=3.3e-09 Score=101.93 Aligned_cols=77 Identities=31% Similarity=0.518 Sum_probs=64.5
Q ss_pred ccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||.|+||.||-++ ..+...||||++.....+....-+++..||+++.+++|||+|.+.|||..+...||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 4445679999999999999 4578899999997655554444567899999999999999999999999988887775
No 98
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.77 E-value=2.3e-08 Score=94.59 Aligned_cols=78 Identities=28% Similarity=0.474 Sum_probs=65.1
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. +++.+|+|.+...... .....+.+|++++++++|||||++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE--GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc--ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 357888999999999999999954 6889999998643322 1234678899999999999999999999999999888
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 82 ~ 82 (303)
T cd07869 82 F 82 (303)
T ss_pred E
Confidence 5
No 99
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=98.77 E-value=1.2e-08 Score=99.56 Aligned_cols=81 Identities=28% Similarity=0.383 Sum_probs=65.6
Q ss_pred HHHhhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFC 472 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 472 (482)
....++|...+.||+|+||.||+|++ ..+..||||+++.... ....+.+.+|++++..+ +|||||+++|+|
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 33456788899999999999999973 2356899999864332 22346789999999999 899999999999
Q ss_pred EeCCEEEEEC
Q 036034 473 LHRKCMFLIY 482 (482)
Q Consensus 473 ~~~~~~~lv~ 482 (482)
.+.+..++||
T Consensus 109 ~~~~~~~lv~ 118 (375)
T cd05104 109 TVGGPTLVIT 118 (375)
T ss_pred ccCCcceeee
Confidence 9999988886
No 100
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.77 E-value=2.3e-10 Score=99.55 Aligned_cols=177 Identities=17% Similarity=0.218 Sum_probs=98.4
Q ss_pred CCCCCEEeCcCCccccc----CCccccCCCCCCeeecccCcce----------eccCccccCCCCCCEEEccCCcccccC
Q 036034 28 LSKLENLHLSSNSLVGN----IPSTLGHLTQLTTLAIASNHIN----------VSIPLEIGNLNFLQVLDLSGNEIRGSI 93 (482)
Q Consensus 28 l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~----------~~~~~~~~~l~~L~~L~L~~n~~~~~~ 93 (482)
+..+..++|++|-|... +...+.+-.+|+..++++-... ..+..++-++++|+..+|++|.+....
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 44555555555554432 2233344445555554432111 023345667788888888888876554
Q ss_pred Cc----cCcCCCCCCEEeCcCCcccccCCccc-------------cCCCCCCEEEcccccCccc-----------ccCcC
Q 036034 94 PS----TFGHLKRLKSLDLSQNKLVGPIPSSL-------------GHLTQLTTLNMRSNLINAS-----------LVNLT 145 (482)
Q Consensus 94 ~~----~l~~l~~L~~L~L~~n~l~~~~~~~l-------------~~l~~L~~L~l~~n~i~~~-----------~~~L~ 145 (482)
|+ .+++-+.|.+|.|++|.+.......+ ++-|.|+.+....|.+... ..+|+
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk 188 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENLK 188 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCce
Confidence 43 34566788888888887753222222 2346677777777766532 23666
Q ss_pred EEEcccCeeccc-----CCccCcCCCCCCEEEccCCccccC----CCcCCcCCCCCCEEeccCCcccc
Q 036034 146 SLSLHYNNLTGP-----IPSTLGHLNRIRILDLSENKLVGP----IPSSVGHLTQLNTLNMYSNQING 204 (482)
Q Consensus 146 ~L~l~~n~~~~~-----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~ 204 (482)
.+.+..|.|... +...+..+.+|+.||+.+|-++.. +...+..++.|+.|.+..|.++.
T Consensus 189 ~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~ 256 (388)
T COG5238 189 EVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSN 256 (388)
T ss_pred eEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhcc
Confidence 777766665421 112334456677777777766522 22334455566666666666553
No 101
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.76 E-value=1.8e-08 Score=98.09 Aligned_cols=86 Identities=21% Similarity=0.334 Sum_probs=70.6
Q ss_pred HHHHHHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 397 QDIIEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 397 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
.++....++|...+.||+|+||.||+++.. +++.+|+|.+...........+.+.+|+.++..++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344556688999999999999999999954 5889999998643333333446688999999999999999999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..|+||
T Consensus 116 ~~~~lv~ 122 (371)
T cd05622 116 RYLYMVM 122 (371)
T ss_pred CEEEEEE
Confidence 9999886
No 102
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.76 E-value=2e-08 Score=97.21 Aligned_cols=77 Identities=25% Similarity=0.375 Sum_probs=64.1
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+|+. .+++.||+|++.... .....+.|.+|++++++++|+|||++++++.+.+..++||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 4566678899999999999995 468999999985432 2223467899999999999999999999999999998885
No 103
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=98.76 E-value=2.3e-08 Score=95.50 Aligned_cols=73 Identities=21% Similarity=0.250 Sum_probs=61.2
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+++. .+|+.+|+|+++............+.+|++++.+++||||+++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEE
Confidence 3599999999999985 468999999997543333334567889999999999999999999999999999986
No 104
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.75 E-value=2.2e-09 Score=100.65 Aligned_cols=78 Identities=23% Similarity=0.432 Sum_probs=63.4
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCC-EEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRK-CMF 479 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~-~~~ 479 (482)
-+.|...+.+|.|+||.||+|+ ...|..||||+++..- ..+.+. .=.||++-+.++. |||||++.+++.+.+ .+|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf-~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKF-YSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhh-ccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 3568888999999999999999 5678899999996422 222221 1267999999998 999999999999988 899
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 87 fVf 89 (538)
T KOG0661|consen 87 FVF 89 (538)
T ss_pred eeH
Confidence 986
No 105
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.75 E-value=3e-08 Score=95.05 Aligned_cols=77 Identities=21% Similarity=0.294 Sum_probs=65.5
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+++.. ++..+|+|.+.... .....+.+.+|++++.+++|||||+++++|.+.++.++||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 57888999999999999999964 58889999886432 1223467999999999999999999999999999999986
No 106
>PHA02988 hypothetical protein; Provisional
Probab=98.75 E-value=2.7e-08 Score=93.09 Aligned_cols=72 Identities=22% Similarity=0.353 Sum_probs=59.1
Q ss_pred ceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH----RKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ 482 (482)
..||+|++|.||+|.+ +|+.||||+++..........+.|.+|++++.+++|||||+++|++.+ ....++||
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~ 101 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLIL 101 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEE
Confidence 5799999999999998 688999999976543333335778999999999999999999999987 34566664
No 107
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=98.74 E-value=2.8e-08 Score=94.85 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=61.1
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+++. .+|+.||+|.+.............+.+|++++.+++||||+++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEE
Confidence 3589999999999994 468999999996543333334567889999999999999999999999999999986
No 108
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.74 E-value=1.6e-08 Score=97.73 Aligned_cols=79 Identities=28% Similarity=0.463 Sum_probs=67.0
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||+||+|+.. +++.||+|++...........+.+.+|++++..++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36788899999999999999954 68999999997543333344567899999999999999999999999999999986
No 109
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.73 E-value=4e-08 Score=93.25 Aligned_cols=77 Identities=26% Similarity=0.430 Sum_probs=64.3
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.+ +++.+|+|.++..... .....+.+|++++++++||||+++++++.+++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC--CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 46888899999999999999854 5788999998643322 22356788999999999999999999999999999886
No 110
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.73 E-value=4.4e-08 Score=93.88 Aligned_cols=77 Identities=21% Similarity=0.270 Sum_probs=65.5
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+++.. ++..+|+|.+.... .....+.|.+|++++.+++|||||++++++.+.+..++||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 57888899999999999999954 68889999986432 2223467999999999999999999999999999999886
No 111
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.72 E-value=3e-08 Score=96.17 Aligned_cols=82 Identities=22% Similarity=0.374 Sum_probs=69.9
Q ss_pred HHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
......|.....||+|.||+|..|+. ..+..||+|.+++.... ....+.+.+|+++|..++|||||+++.+...+..+
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln-~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l 130 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLN-PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATL 130 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccC-hHHHHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence 34556788899999999999999994 46999999999865543 34445699999999999999999999999999999
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 131 ylV~ 134 (596)
T KOG0586|consen 131 YLVM 134 (596)
T ss_pred EEEE
Confidence 9986
No 112
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=98.72 E-value=3e-08 Score=94.21 Aligned_cols=71 Identities=21% Similarity=0.310 Sum_probs=59.8
Q ss_pred eCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|+||.||+|+.. +++.||+|.+...........+.+.+|++++.+++|||||+++++|.+.+..|+||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 72 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVL 72 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEE
Confidence 699999999999954 58899999986543333344567889999999999999999999999999999886
No 113
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.72 E-value=3e-08 Score=91.54 Aligned_cols=76 Identities=20% Similarity=0.479 Sum_probs=65.2
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|...+.||+|+||.||+|...+++.||+|.++.... ..++|.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 356888899999999999999987778899999864332 2367999999999999999999999999988888875
No 114
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.72 E-value=4e-08 Score=90.98 Aligned_cols=79 Identities=28% Similarity=0.447 Sum_probs=67.7
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+|+.. +|+.+|+|.++.....+....+.+.+|++++.+++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 56888899999999999999965 78999999986544444444678999999999999999999999999998888875
No 115
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=98.72 E-value=2.6e-08 Score=91.70 Aligned_cols=75 Identities=24% Similarity=0.508 Sum_probs=63.6
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||.|.+.++..+|+|.+..... ..++|.+|+.++.+++||||++++++|.+.+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 46778889999999999999987777799998864322 2367999999999999999999999999888888875
No 116
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=98.72 E-value=2.7e-08 Score=93.30 Aligned_cols=77 Identities=27% Similarity=0.480 Sum_probs=65.1
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||+|+.. +++.+|+|++...... ....+.+.+|++++.+++||||+++++++.+.+..|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 5788899999999999999964 5889999998654322 233467889999999999999999999999999999886
No 117
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.72 E-value=2.5e-08 Score=92.44 Aligned_cols=79 Identities=28% Similarity=0.450 Sum_probs=66.6
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+. .+++.+|||.+......+....++|.+|++++..++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677788999999999999994 578999999886544334445578999999999999999999999999998888875
No 118
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=98.72 E-value=3.9e-08 Score=94.07 Aligned_cols=73 Identities=22% Similarity=0.265 Sum_probs=61.6
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+++. .+|+.||+|.+.............+.+|++++.+++||||+++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 74 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVM 74 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEE
Confidence 3589999999999984 468999999997543333344567899999999999999999999999999999986
No 119
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.72 E-value=3.2e-08 Score=94.81 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=66.3
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+++. .+|+.+|+|+++..........+.+.+|+.++..++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3678889999999999999995 468999999997543323334567899999999999999999999999999999986
No 120
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.72 E-value=3.3e-08 Score=95.95 Aligned_cols=78 Identities=23% Similarity=0.389 Sum_probs=66.0
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||+++. .+++.||+|++...........+.+.+|++++.+++||||+++++++.+.+..|+||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 678889999999999999985 468999999996533333334567889999999999999999999999999999986
No 121
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.71 E-value=5.4e-08 Score=92.23 Aligned_cols=79 Identities=30% Similarity=0.468 Sum_probs=66.2
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.|...+.||+|+||.||+|+.. +++.||+|.+...........+++.+|++++.+++||||+++.++|.+++..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45777888999999999999954 68999999986443333344567899999999999999999999999999998885
No 122
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.71 E-value=3.5e-08 Score=94.57 Aligned_cols=79 Identities=23% Similarity=0.346 Sum_probs=66.0
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+++.. +++.+|+|.+...........+.|.+|+.++..++|+||+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888899999999999999954 58899999986533333334466889999999999999999999999999999986
No 123
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.70 E-value=5.2e-08 Score=91.29 Aligned_cols=77 Identities=21% Similarity=0.362 Sum_probs=63.2
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||+|+||+||+|+. .+++.+|+|.+...........+.+.+|++++.+++|+||+++.+++.+++..++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence 55667899999999999985 468899999986543333333456788999999999999999999999999888875
No 124
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=98.69 E-value=4.2e-08 Score=90.95 Aligned_cols=80 Identities=23% Similarity=0.329 Sum_probs=65.8
Q ss_pred HHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
+.++..+.....||+|+||.||+|+. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 44556666677899999999999995 457889999886432 22346799999999999999999999999999988
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 81 ~lv~ 84 (268)
T cd06624 81 KIFM 84 (268)
T ss_pred EEEE
Confidence 8875
No 125
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.69 E-value=4.7e-08 Score=93.42 Aligned_cols=77 Identities=22% Similarity=0.388 Sum_probs=60.5
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHH---hcCCCCCccceeEEEEeCCEEEEE
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLL---SQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l---~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
|...+.||+|+||.||+|+. .+++.||||+++..........+.+.+|++++ ++++||||+++++++.+++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 45678899999999999985 46899999999653322223345677776655 577899999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 81 ~ 81 (324)
T cd05589 81 M 81 (324)
T ss_pred E
Confidence 6
No 126
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=98.69 E-value=3.7e-08 Score=90.93 Aligned_cols=76 Identities=24% Similarity=0.485 Sum_probs=65.3
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|+..+.||+|+||.||+|...+++.||+|.+..... ..+.|.+|+.++++++||||+++++++.+.+..++||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch----hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 357888899999999999999987888899998764322 2468999999999999999999999999888888875
No 127
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.69 E-value=3.1e-08 Score=91.39 Aligned_cols=73 Identities=41% Similarity=0.708 Sum_probs=58.8
Q ss_pred ccceeCccCcEEEEEEEcC-----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 408 IKYCIGTGGYGSVYRARLP-----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 408 ~~~~ig~g~~g~v~~~~~~-----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..+.||.|.||.||+|++. .+..|+||.++... .....++|.+|++.+++++||||++++|+|...+..++||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS--SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS--SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc--ccccceeeeecccccccccccccccccccccccccccccc
Confidence 3567999999999999975 25689999995422 2234578999999999999999999999999877777764
No 128
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.69 E-value=4.4e-08 Score=94.09 Aligned_cols=82 Identities=20% Similarity=0.385 Sum_probs=66.8
Q ss_pred HHhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccch--hhHHHHHHHHHHHhcCC-CCCccceeEEEEeCC
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEEL--TSLESFRNKARLLSQIR-HRNIVKLYGFCLHRK 476 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~--~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~ 476 (482)
...+.|...+.||+|+||+|+.|+ ..+++.||+|.+++...... ...+.+.+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 345688899999999999999998 45689999997765422211 23355678999999999 999999999999999
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..|+||
T Consensus 94 ~~~ivm 99 (370)
T KOG0583|consen 94 KIYIVM 99 (370)
T ss_pred eEEEEE
Confidence 999986
No 129
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.68 E-value=3.1e-08 Score=90.16 Aligned_cols=79 Identities=32% Similarity=0.466 Sum_probs=62.8
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCC-ccceeEEEEeCC----
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRN-IVKLYGFCLHRK---- 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~g~~~~~~---- 476 (482)
...|...+.+|+|+||+||+|+ ..+|+.||+|++.-.... .+.-..-.+|+.++.+++|+| ||++++++.+..
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 3456667779999999999999 457899999999654332 122234578999999999999 999999999877
Q ss_pred --EEEEEC
Q 036034 477 --CMFLIY 482 (482)
Q Consensus 477 --~~~lv~ 482 (482)
.+++||
T Consensus 89 ~~~l~lvf 96 (323)
T KOG0594|consen 89 IGKLYLVF 96 (323)
T ss_pred cceEEEEE
Confidence 777775
No 130
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.68 E-value=3.9e-08 Score=89.63 Aligned_cols=64 Identities=28% Similarity=0.511 Sum_probs=52.3
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
.|...+.+|.|+||.||+|.. ..+..||||+...++... -+|.++|+.++|||||++.-+|...
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~ 89 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSS 89 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEec
Confidence 466678999999999999995 457899999886543321 2689999999999999999988764
No 131
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.68 E-value=5.5e-08 Score=91.35 Aligned_cols=78 Identities=36% Similarity=0.554 Sum_probs=66.2
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||++... +++.+|+|.+........+..+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 5778899999999999999954 68999999986544333344577899999999999999999999999999888875
No 132
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.68 E-value=7.5e-08 Score=89.88 Aligned_cols=76 Identities=17% Similarity=0.293 Sum_probs=63.7
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||+|+. .+++.+|+|.+.... .....++|.+|++++.+++||||++++++|...+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 566778899999999999984 568899999986432 2223467999999999999999999999999999988885
No 133
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=98.68 E-value=3.9e-08 Score=96.33 Aligned_cols=82 Identities=23% Similarity=0.410 Sum_probs=65.4
Q ss_pred HHHHhhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEE
Q 036034 399 IIEATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGF 471 (482)
Q Consensus 399 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~ 471 (482)
+....++|...+.||+|+||.||+|++. .++.||+|+++.... ....+.+.+|++++.++. |||||+++|+
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 3344566778899999999999999853 245799999975322 223457899999999997 9999999999
Q ss_pred EEeCCEEEEEC
Q 036034 472 CLHRKCMFLIY 482 (482)
Q Consensus 472 ~~~~~~~~lv~ 482 (482)
|.+.+..++||
T Consensus 110 ~~~~~~~~iv~ 120 (401)
T cd05107 110 CTKGGPIYIIT 120 (401)
T ss_pred EccCCCcEEEE
Confidence 99988888875
No 134
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.68 E-value=6.6e-08 Score=89.47 Aligned_cols=78 Identities=24% Similarity=0.531 Sum_probs=64.3
Q ss_pred cccccceeCccCcEEEEEEEcCCCCEEEEEEecccccc---chhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETE---ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
+|...+.||+|+||+||+|...+++.+|+|.++..... .....+.+.+|++++++++|+||++++++|.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 36677889999999999999878999999988643211 122345689999999999999999999999999888887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 81 ~ 81 (265)
T cd06631 81 M 81 (265)
T ss_pred E
Confidence 5
No 135
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=98.68 E-value=5.8e-08 Score=89.91 Aligned_cols=77 Identities=29% Similarity=0.421 Sum_probs=63.8
Q ss_pred hcccccceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
++|+..+.||+|+||.||+|++.. ...||+|.++... .....++|.+|+.++.+++||||+++++++.+.+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 568889999999999999999642 3578999886432 2234467999999999999999999999999988888
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 82 iv~ 84 (266)
T cd05033 82 IIT 84 (266)
T ss_pred EEE
Confidence 875
No 136
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.68 E-value=6.2e-08 Score=92.76 Aligned_cols=73 Identities=16% Similarity=0.305 Sum_probs=61.1
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+++. .+++.||+|.++..........+.+.+|+.++.++ +|||||++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEE
Confidence 3689999999999995 46889999999754433444456788999999998 7999999999999999999986
No 137
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.67 E-value=1.3e-08 Score=99.83 Aligned_cols=74 Identities=26% Similarity=0.522 Sum_probs=59.0
Q ss_pred ccccceeCccCcEEEEEEEcC--CCC--EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 406 FHIKYCIGTGGYGSVYRARLP--SGK--VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~--~~~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
....+.||+|+||.|++|.|. +|+ .||||.+..+.... .+.+|.+|+.+|.+++|||+|++||+..+ ..++||
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 334567999999999999975 354 57999997654432 56899999999999999999999999987 555555
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 189 ~ 189 (1039)
T KOG0199|consen 189 F 189 (1039)
T ss_pred h
Confidence 3
No 138
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=98.67 E-value=8e-08 Score=91.08 Aligned_cols=76 Identities=22% Similarity=0.279 Sum_probs=63.8
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||+++. .++..+|+|.+.... .....+++.+|++++.+++||||++++++|.+++..++||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 578889999999999999995 458889999886432 1223467889999999999999999999999999999986
No 139
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.67 E-value=5.9e-08 Score=94.97 Aligned_cols=70 Identities=23% Similarity=0.251 Sum_probs=60.6
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+|...+.||+|+||.||+++. ..++.||+|.... +.+.+|++++++++|||||++++++...+..++||
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 5699999999999999999994 5688999996431 35678999999999999999999999988888874
No 140
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.67 E-value=7.6e-08 Score=90.15 Aligned_cols=77 Identities=23% Similarity=0.375 Sum_probs=63.6
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|+..+.||+|+||.||++.. .+++.+|+|.+...........+.+.+|+.++.+++|++++++++.+.+.+..++||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEE
Confidence 56678899999999999995 468899999986543333333456788999999999999999999999999998885
No 141
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=98.66 E-value=4.2e-08 Score=95.60 Aligned_cols=80 Identities=28% Similarity=0.467 Sum_probs=64.9
Q ss_pred HHhhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCL 473 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 473 (482)
-..++|+..+.||+|+||.||+|+. .++..||+|+++..... ...+.+.+|+++++.+ +|||||+++|+|.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT--DEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH--HHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 3446788899999999999999873 12457999999654322 2346788999999999 8999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
+.+..++||
T Consensus 113 ~~~~~~lv~ 121 (374)
T cd05106 113 HGGPVLVIT 121 (374)
T ss_pred CCCCeEEeH
Confidence 999998885
No 142
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=98.66 E-value=7.3e-08 Score=92.10 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=61.1
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+++. .+|+.||+|.+.............+.+|++++..++||||+++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~ 74 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 74 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEE
Confidence 3589999999999984 468999999997543333334567889999999999999999999999999999986
No 143
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.66 E-value=4.2e-08 Score=95.09 Aligned_cols=77 Identities=29% Similarity=0.562 Sum_probs=58.2
Q ss_pred hhcccccceeCccCcEEEEEEEcC---CCC--EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP---SGK--VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~---~~~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
.+.....++||+|.||.||+|.+- .|. .||||.-+.+. +....+.|.+|+.+|+.++|||||+++|.|.+..
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P- 464 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP- 464 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc-
Confidence 344556688999999999999953 233 46788765432 2334688999999999999999999999997654
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.+|||
T Consensus 465 ~Wivm 469 (974)
T KOG4257|consen 465 MWIVM 469 (974)
T ss_pred eeEEE
Confidence 45554
No 144
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.66 E-value=1.1e-08 Score=106.34 Aligned_cols=74 Identities=26% Similarity=0.430 Sum_probs=60.7
Q ss_pred HHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
.+-..+|+....+|+|+||.||+++- -||+.+|||++.... ..+......+|++++++++|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs 549 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVES 549 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc
Confidence 45667888899999999999999993 389999999997544 223345678899999999999999998776553
No 145
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.65 E-value=1e-07 Score=90.06 Aligned_cols=77 Identities=27% Similarity=0.444 Sum_probs=64.2
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.++.+++||||+++++++.+++..++||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc--CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 56888899999999999999854 5889999998643322 22356788999999999999999999999999998885
No 146
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=98.65 E-value=9.6e-08 Score=87.32 Aligned_cols=75 Identities=23% Similarity=0.352 Sum_probs=62.0
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-EEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-CMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ 482 (482)
.+..+.||+|..|+|||+.. ++++.+|.|.+.-. .+....++..+|++++.+++||+||+++|.|.... +++|+|
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 33467799999999999995 46889999999432 23334578999999999999999999999999988 488876
No 147
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.65 E-value=8.8e-08 Score=89.98 Aligned_cols=79 Identities=25% Similarity=0.381 Sum_probs=65.4
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
++++|...+.||+|+||.||+|.. .+++.+|+|++...... .....+.+|++++.+++|+||+++++++.+++..|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE--GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC--CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 457888999999999999999985 46889999998643222 222467889999999999999999999999988888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 81 v~ 82 (291)
T cd07870 81 VF 82 (291)
T ss_pred EE
Confidence 75
No 148
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.65 E-value=6.1e-08 Score=94.52 Aligned_cols=77 Identities=23% Similarity=0.349 Sum_probs=62.7
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----EE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-----CM 478 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~ 478 (482)
+|+..+.||+|+||.||+++. .+|+.||+|++.... .+....+.+.+|++++..++||||+++++++...+ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 467788999999999999995 468999999985422 22234467889999999999999999999998876 67
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 80 ~lv~ 83 (372)
T cd07853 80 YVVT 83 (372)
T ss_pred EEEe
Confidence 7774
No 149
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=98.65 E-value=6.2e-08 Score=90.49 Aligned_cols=71 Identities=27% Similarity=0.418 Sum_probs=59.3
Q ss_pred eCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|+||+||+++. .+++.+|+|.+...........+.+..|++++.+++||||+++.+++.+++..++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 72 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVM 72 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEE
Confidence 69999999999985 468899999986543333334467889999999999999999999999999998886
No 150
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.65 E-value=2.4e-08 Score=96.06 Aligned_cols=79 Identities=24% Similarity=0.441 Sum_probs=61.4
Q ss_pred HhhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLH 474 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 474 (482)
+.++|...+.||+|+||.||+|+. ..++.||||+++... .....+.+.+|++++.++ +|||||+++|+|.+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 346788899999999999999973 235689999986432 222346799999999999 89999999999876
Q ss_pred CC-EEEEEC
Q 036034 475 RK-CMFLIY 482 (482)
Q Consensus 475 ~~-~~~lv~ 482 (482)
.+ ..++||
T Consensus 83 ~~~~~~lv~ 91 (338)
T cd05102 83 PNGPLMVIV 91 (338)
T ss_pred CCCceEEEE
Confidence 54 466654
No 151
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.64 E-value=3.7e-08 Score=90.90 Aligned_cols=79 Identities=22% Similarity=0.510 Sum_probs=67.8
Q ss_pred HHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
++..+|+..+.||+|+||.||+|+..+++.+|+|.+..... ...+++..|+.++.+++||||+++++++.+.+..++
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence 45677888999999999999999987789999999864322 234678999999999999999999999999998888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 80 v~ 81 (261)
T cd05148 80 IT 81 (261)
T ss_pred EE
Confidence 75
No 152
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.64 E-value=7.5e-08 Score=92.33 Aligned_cols=79 Identities=28% Similarity=0.368 Sum_probs=65.5
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+++.. .++.+|+|.+...........+.|.+|+.++..++|+||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36788899999999999999964 47889999986433333333456889999999999999999999999999999986
No 153
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=98.63 E-value=9.3e-08 Score=88.23 Aligned_cols=76 Identities=25% Similarity=0.545 Sum_probs=65.0
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|...+.||+|+||.||+|...+++.+|+|.+..... ..+++.+|+.++++++||||+++++++.+....++||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 467888899999999999999987778899999864332 2367999999999999999999999999888888875
No 154
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.63 E-value=8.8e-08 Score=89.60 Aligned_cols=77 Identities=22% Similarity=0.458 Sum_probs=63.3
Q ss_pred hcccccceeCccCcEEEEEEEc-----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.+|+..+.||+|+||.||+|+. ..+..+|+|.+.... .....++|.+|++++++++||||+++++++..++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4577788999999999999983 246789999986422 223346799999999999999999999999999888
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 83 ~lv~ 86 (283)
T cd05090 83 CMLF 86 (283)
T ss_pred EEEE
Confidence 8875
No 155
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.63 E-value=7.8e-08 Score=88.71 Aligned_cols=75 Identities=27% Similarity=0.486 Sum_probs=61.5
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|...+.||+|+||.||+|..++++.+|+|.+..... ..++|.+|+.++++++||||+++++++. .+..++||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 356788899999999999999988889999999864332 2367999999999999999999999874 44556654
No 156
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.63 E-value=1.1e-07 Score=91.00 Aligned_cols=73 Identities=19% Similarity=0.333 Sum_probs=60.3
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+. .+++.+|+|.++..........+.+.+|+.++.++ +|||||++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence 3699999999999995 45889999999754333334456788899988877 7999999999999999999986
No 157
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.63 E-value=9.6e-08 Score=89.40 Aligned_cols=77 Identities=25% Similarity=0.411 Sum_probs=64.7
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||+||+++. ++|+.+|+|.+..... ....+.|.+|++++..++||||+++++++.+.+..++||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK--SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc--chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 5677788999999999999995 4688999998764322 223467999999999999999999999999999999886
No 158
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.62 E-value=1.3e-07 Score=90.01 Aligned_cols=78 Identities=28% Similarity=0.450 Sum_probs=65.0
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.|...+.||+|+||.||+|+. .++..+|+|.+...........+.+.+|++++++++|||+|+++++|.+++..++||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 366678899999999999995 468899999986543333344567899999999999999999999999999888885
No 159
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.62 E-value=1.5e-07 Score=87.21 Aligned_cols=76 Identities=25% Similarity=0.526 Sum_probs=64.2
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+|+. .+++.+|+|++..... .....+.+|+.++.+++||||+++++++.+++..|+||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 5688889999999999999995 5688999999864321 23356889999999999999999999999999988885
No 160
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.62 E-value=2.6e-08 Score=94.40 Aligned_cols=79 Identities=25% Similarity=0.424 Sum_probs=67.0
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.+-|+..+.||+|.|+.|-.++ .-.|..||||++++.+..+. ....+.+|+++|+-++|||||++|++......+|||
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 3557788899999999998887 44799999999988776543 345678899999999999999999999999999987
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
+
T Consensus 96 L 96 (864)
T KOG4717|consen 96 L 96 (864)
T ss_pred E
Confidence 3
No 161
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.61 E-value=9.5e-08 Score=91.22 Aligned_cols=73 Identities=26% Similarity=0.439 Sum_probs=59.4
Q ss_pred ceeCccCcEEEEEEEc----CCCCEEEEEEecccccc-chhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL----PSGKVVALKKLHCSETE-ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~----~~~~~vavK~l~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+++. ..++.||+|.++..... .......+.+|++++.+++||||+++++++.+++..|+||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEE
Confidence 5699999999999984 35789999998653221 2233456789999999999999999999999999999886
No 162
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=98.61 E-value=1e-07 Score=87.30 Aligned_cols=70 Identities=31% Similarity=0.552 Sum_probs=59.4
Q ss_pred eeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|..++++.+|+|.+..... ......|.+|++++.+++||||++++++|.+.+..++||
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 71 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP--QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVM 71 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEE
Confidence 5899999999999987889999998864322 223357899999999999999999999999988888875
No 163
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.61 E-value=4.8e-08 Score=90.02 Aligned_cols=78 Identities=24% Similarity=0.408 Sum_probs=65.8
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||.|+||.||+|... +++.+|+|.+...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 3677889999999999999964 58899999997544333345678999999999999999999999999998888875
No 164
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.61 E-value=1.3e-07 Score=88.91 Aligned_cols=77 Identities=30% Similarity=0.508 Sum_probs=64.3
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.+ +++.||+|.+....... ....+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG--APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC--CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 56888899999999999999954 68899999986433221 2245778999999999999999999999999999886
No 165
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.61 E-value=1.5e-07 Score=88.13 Aligned_cols=77 Identities=31% Similarity=0.522 Sum_probs=64.0
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||+|+.. +++.||+|++..... +....+.+.+|+.++.+++||||+++++++.+++..|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence 4677889999999999999954 688999999864322 2223467889999999999999999999999999999885
No 166
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.61 E-value=8.8e-08 Score=88.17 Aligned_cols=75 Identities=24% Similarity=0.504 Sum_probs=63.2
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+|+..+.||+|+||.||+|+.+.+..+|+|.+..... ...+|.+|++++.+++||||+++++++.+.+..|+||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEE
Confidence 35777888999999999999987777899998854222 2357889999999999999999999999988888875
No 167
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.61 E-value=1.1e-07 Score=88.76 Aligned_cols=71 Identities=23% Similarity=0.331 Sum_probs=57.7
Q ss_pred eCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|+||.||+++. .+|+.+|+|.+...........+.+..|++++.+++||||+++.+++.++...++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~ 72 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVM 72 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEE
Confidence 69999999999985 458999999986433222223345677999999999999999999999999998886
No 168
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.60 E-value=1.3e-07 Score=87.03 Aligned_cols=75 Identities=27% Similarity=0.539 Sum_probs=63.5
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+..... ...+|.+|++++.+++|||++++++++......++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 46777889999999999999987788999998864322 2357899999999999999999999999888888875
No 169
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=98.59 E-value=1.7e-07 Score=87.43 Aligned_cols=76 Identities=28% Similarity=0.424 Sum_probs=63.2
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
-|+..+.||+|+||.||+|.. .+++.+|+|....... ....+.|.+|++++++++||||+++++++.+++..|+||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 356678899999999999985 4688999998754322 233467899999999999999999999999999999885
No 170
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.59 E-value=6.4e-08 Score=90.62 Aligned_cols=78 Identities=29% Similarity=0.536 Sum_probs=64.8
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+|+.. .++.+|+|++....... ...+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 35778899999999999999965 58899999886432222 23467889999999999999999999999999998885
No 171
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.59 E-value=8.7e-08 Score=94.21 Aligned_cols=81 Identities=23% Similarity=0.446 Sum_probs=71.1
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
...+|...+++|+|+||+|+.++.+ +++.+|||+++++..-...+++..+.|.+|+.-. +||.+++++.++.+++++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4467889999999999999999965 5889999999887766666778889999998877 5999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
.||
T Consensus 446 fvm 448 (694)
T KOG0694|consen 446 FVM 448 (694)
T ss_pred EEE
Confidence 987
No 172
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.59 E-value=1.3e-07 Score=90.10 Aligned_cols=73 Identities=21% Similarity=0.337 Sum_probs=60.0
Q ss_pred ceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||+||+|+.. +++.+|+|+++............+.+|++++..+ +||||+++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 36999999999999964 5789999999754333334456778899999888 6999999999999999999986
No 173
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.58 E-value=1.7e-07 Score=89.10 Aligned_cols=77 Identities=32% Similarity=0.597 Sum_probs=63.2
Q ss_pred ccccceeCccCcEEEEEEEcC---CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEEEE
Q 036034 406 FHIKYCIGTGGYGSVYRARLP---SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCMFL 480 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~l 480 (482)
|...+.||+|+||.||+|+.. +++.||+|.+...........+.+.+|++++.+++||||+++++++.+. +..++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 667788999999999999954 4789999999754322233346788999999999999999999999988 77888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 82 v~ 83 (316)
T cd07842 82 LF 83 (316)
T ss_pred EE
Confidence 75
No 174
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.58 E-value=1.6e-07 Score=88.93 Aligned_cols=78 Identities=18% Similarity=0.301 Sum_probs=65.5
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||+++.. .++.||+|.+...........+.+.+|++++..++||||+++++.+.++++.++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 5778899999999999999954 58899999986543333344567889999999999999999999999999888885
No 175
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.58 E-value=1.6e-07 Score=87.85 Aligned_cols=76 Identities=28% Similarity=0.534 Sum_probs=63.8
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||.|++|.||+|+.. +|+.||+|.++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEE
Confidence 4777889999999999999964 6889999998654322 22356788999999999999999999999999988886
No 176
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.58 E-value=1.2e-07 Score=87.84 Aligned_cols=77 Identities=29% Similarity=0.436 Sum_probs=62.9
Q ss_pred hcccccceeCccCcEEEEEEEcC-C---CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-S---GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~---~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
.+|+..+.||+|+||.||+|+.. + +..+|+|.++.... ....+.|.+|+.++.+++||||+++++++.+++..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 56778899999999999999853 2 33789998864322 233568999999999999999999999999999888
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 82 lv~ 84 (267)
T cd05066 82 IVT 84 (267)
T ss_pred EEE
Confidence 875
No 177
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.58 E-value=1.4e-07 Score=89.97 Aligned_cols=73 Identities=21% Similarity=0.329 Sum_probs=59.7
Q ss_pred ceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+.. +++.||+|++...........+.+..|++++..+ +||||+++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEE
Confidence 35899999999999954 5889999998754333334456688899999876 7999999999999999999986
No 178
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=98.58 E-value=1e-07 Score=89.01 Aligned_cols=77 Identities=27% Similarity=0.553 Sum_probs=63.6
Q ss_pred hcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
.+|...+.||+|+||.||+|+.. +++.||+|.++.... ....+.|.+|++++.+++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 45777889999999999999853 247899999864322 2234789999999999999999999999999988
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 83 ~~lv~ 87 (280)
T cd05049 83 PIMVF 87 (280)
T ss_pred eEEEE
Confidence 88875
No 179
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.58 E-value=1.1e-07 Score=89.07 Aligned_cols=77 Identities=34% Similarity=0.517 Sum_probs=63.7
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||+|+. .+++.+|+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence 367788899999999999985 46899999988643322 223357889999999999999999999999999888885
No 180
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.58 E-value=2e-07 Score=86.15 Aligned_cols=79 Identities=19% Similarity=0.412 Sum_probs=65.1
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEecccccc--chhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETE--ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
++|...+.||+|++|.||+|.. .+++.+|+|.+...... .....+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688889999999999999984 46899999988643222 12234678999999999999999999999999999888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 82 v~ 83 (263)
T cd06625 82 FM 83 (263)
T ss_pred EE
Confidence 75
No 181
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.58 E-value=1.8e-07 Score=89.13 Aligned_cols=72 Identities=24% Similarity=0.376 Sum_probs=58.9
Q ss_pred ceeCccCcEEEEEEEc----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+++. .+|+.+|+|++...... ......+.+|++++.+++|||||++++++.+.+..|+||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEE
Confidence 4699999999999873 35889999999643221 223356788999999999999999999999999999986
No 182
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=98.57 E-value=1e-07 Score=89.49 Aligned_cols=78 Identities=33% Similarity=0.553 Sum_probs=64.0
Q ss_pred hhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
.++|+..+.||+|+||.||+|..+ ++..+|+|.+.... .....++|.+|++++++++||||++++++|.+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 457888899999999999999853 46789999986432 2233467999999999999999999999999888
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 82 ~~~lv~ 87 (288)
T cd05050 82 PMCLLF 87 (288)
T ss_pred ccEEEE
Confidence 888775
No 183
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.57 E-value=1.5e-07 Score=90.40 Aligned_cols=77 Identities=26% Similarity=0.459 Sum_probs=60.4
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----EE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-----CM 478 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~ 478 (482)
.|+..+.||+|+||.||+|+. .+++.||+|++..... .......+.+|++++++++|||||++++++...+ ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 367788999999999999994 4689999999864221 2223457889999999999999999999886532 46
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 80 ~lv~ 83 (338)
T cd07859 80 YVVF 83 (338)
T ss_pred EEEE
Confidence 7765
No 184
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=98.57 E-value=1.9e-07 Score=85.85 Aligned_cols=77 Identities=22% Similarity=0.441 Sum_probs=63.4
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEecccccc--chhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETE--ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||+|+||.||+|+.. +++.||+|.+...... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 556788999999999999965 7899999988543211 1234567999999999999999999999999988888875
No 185
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.57 E-value=1.8e-07 Score=86.98 Aligned_cols=77 Identities=26% Similarity=0.429 Sum_probs=61.6
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccc-------hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEE-------LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~-------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
|...+.||+|+||.||+|.. .+|+.+|+|.++...... ....+.+.+|+.++++++|||++++++++.+.+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 56678899999999999984 468999999875321111 1123568899999999999999999999999988
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 83 ~~lv~ 87 (272)
T cd06629 83 LSIFL 87 (272)
T ss_pred eEEEE
Confidence 88875
No 186
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.57 E-value=2.1e-07 Score=97.29 Aligned_cols=80 Identities=23% Similarity=0.318 Sum_probs=68.2
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. .++.||+|++...........+.+.+|+.++..++|||||++++++.+.+..|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 357888999999999999999964 6899999999754444444457789999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 83 m 83 (669)
T cd05610 83 M 83 (669)
T ss_pred E
Confidence 6
No 187
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.56 E-value=1.4e-07 Score=86.54 Aligned_cols=70 Identities=31% Similarity=0.573 Sum_probs=58.7
Q ss_pred eeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|+. .+++.+|+|...... .......|.+|++++++++||||++++++|.+.+..++||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 72 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 72 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEE
Confidence 589999999999996 468899999875322 2233467999999999999999999999999998888885
No 188
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.56 E-value=5.5e-10 Score=98.54 Aligned_cols=99 Identities=23% Similarity=0.257 Sum_probs=65.5
Q ss_pred CCCeeecccCcceec-cCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCc-cccc-CCccccCCCCCCEE
Q 036034 54 QLTTLAIASNHINVS-IPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNK-LVGP-IPSSLGHLTQLTTL 130 (482)
Q Consensus 54 ~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~-l~~~-~~~~l~~l~~L~~L 130 (482)
.|++|||+...|+.. +-..++.+.+|+.|.|.++++.+.+...+++..+|+.|+++.+. ++.. .--.+.+++.|++|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 488888888777642 23345667788888888888888788888888888888888763 2211 11125677778888
Q ss_pred EcccccCccc---------ccCcCEEEcccC
Q 036034 131 NMRSNLINAS---------LVNLTSLSLHYN 152 (482)
Q Consensus 131 ~l~~n~i~~~---------~~~L~~L~l~~n 152 (482)
++++|.+... -++|+.|+++++
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~ 296 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGY 296 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhh
Confidence 8887766532 345555555543
No 189
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.56 E-value=1.5e-07 Score=87.13 Aligned_cols=78 Identities=23% Similarity=0.460 Sum_probs=63.6
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccc---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEE---LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
+|+..+.||+|+||.||+|.. .+++.+|+|.+....... ....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 366678899999999999984 568999999986433211 1235679999999999999999999999999888888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 81 v~ 82 (268)
T cd06630 81 FV 82 (268)
T ss_pred EE
Confidence 75
No 190
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.56 E-value=1.9e-07 Score=89.16 Aligned_cols=73 Identities=21% Similarity=0.291 Sum_probs=57.0
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHH-HHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKA-RLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~-~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+. .+++.+|+|++...........+.+.+|. .++..++|||||++++++.+.+..|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence 3699999999999995 46889999998653322223334555665 4678899999999999999999999986
No 191
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=98.56 E-value=1.7e-07 Score=86.24 Aligned_cols=75 Identities=27% Similarity=0.535 Sum_probs=64.1
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|+..+.||+|+||.||+|... |+.||+|.++.... ..+++.+|+.++.+++|+||+++++++.+.+..++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 356788899999999999999874 78999999865332 3478999999999999999999999999888888875
No 192
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.56 E-value=2.3e-07 Score=88.30 Aligned_cols=78 Identities=24% Similarity=0.389 Sum_probs=66.3
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||+|+.. +++.+|+|.+...........+.+.+|++++.+++||||+++++++.+.+..|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 5778889999999999999964 58999999997654333334567999999999999999999999999999888885
No 193
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.56 E-value=2.1e-07 Score=85.52 Aligned_cols=77 Identities=25% Similarity=0.436 Sum_probs=64.6
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||+|+.. +++.+|+|.+...... ....+++.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEE
Confidence 4677788999999999999954 6899999998643322 334578999999999999999999999999999888885
No 194
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.56 E-value=1.5e-07 Score=89.55 Aligned_cols=73 Identities=22% Similarity=0.493 Sum_probs=57.8
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCC----EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGK----VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.+|+..+.||+|+||.||+|++. ++. .||+|.++... .....++|.+|+.+++.++||||++++|+|......
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCce
Confidence 46888899999999999999853 333 48999986432 223446799999999999999999999999876433
No 195
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.55 E-value=2.8e-07 Score=86.82 Aligned_cols=77 Identities=22% Similarity=0.334 Sum_probs=65.5
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
..+|...+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|+.+++.++||||++++++|..++..|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 36788889999999999999994 5799999999864332 2336788999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 95 ~ 95 (297)
T cd06656 95 M 95 (297)
T ss_pred e
Confidence 6
No 196
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.55 E-value=2.1e-07 Score=88.97 Aligned_cols=78 Identities=18% Similarity=0.265 Sum_probs=63.1
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCC-CccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHR-NIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||+|+.. +++.||+|++...........+.+..|++++..++|+ +|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4777889999999999999954 5789999998754333334456788999999999765 5888999999999999986
No 197
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.55 E-value=2.4e-07 Score=87.18 Aligned_cols=78 Identities=28% Similarity=0.495 Sum_probs=65.0
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|++|.||+|+.. +|+.||+|.+...... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 46888899999999999999954 6889999988543221 223357889999999999999999999999999998885
No 198
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.55 E-value=3.3e-07 Score=84.77 Aligned_cols=77 Identities=27% Similarity=0.506 Sum_probs=64.9
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||.|+||.||+|.. .++..+|+|++....... ..+.+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 3678889999999999999995 468899999986433222 4578999999999999999999999999999888875
No 199
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.55 E-value=1.9e-07 Score=88.99 Aligned_cols=73 Identities=27% Similarity=0.413 Sum_probs=59.5
Q ss_pred ceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+.+ +++.||+|++...........+.+..|++++... +||||+++++++.+.+..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEE
Confidence 35899999999999954 5889999998654332333456788899998877 6999999999999999999986
No 200
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.54 E-value=2.4e-07 Score=88.58 Aligned_cols=73 Identities=22% Similarity=0.296 Sum_probs=57.0
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKAR-LLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+. .+|+.+|+|++...........+.+..|.. +++.++||||+++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEE
Confidence 3589999999999984 468999999986533222233355666654 567899999999999999999999986
No 201
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.54 E-value=2.5e-07 Score=88.38 Aligned_cols=73 Identities=22% Similarity=0.317 Sum_probs=56.7
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKAR-LLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||+||+|+. .+|+.||+|.+...........+.+..|.. ++..++|||||++++++.+.+..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEE
Confidence 3589999999999995 468999999986543222233345555554 567899999999999999999999886
No 202
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.54 E-value=3.5e-07 Score=86.90 Aligned_cols=77 Identities=27% Similarity=0.443 Sum_probs=63.7
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||+|+||.||+|+. .+++.+|+|.+...........+.+.+|++++.+++|||++++++++.+.+..|+||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence 44456799999999999985 468899999986543333344567889999999999999999999999999998885
No 203
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=98.54 E-value=2.1e-07 Score=86.82 Aligned_cols=77 Identities=27% Similarity=0.466 Sum_probs=65.7
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|+..+.||.|+||.||+|... ++..+|+|.+... .....+.|.+|++++++++||||+++++++.+++..|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 456888889999999999999964 6889999998543 223446799999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 81 ~ 81 (280)
T cd06611 81 I 81 (280)
T ss_pred e
Confidence 6
No 204
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.54 E-value=2.6e-07 Score=84.99 Aligned_cols=77 Identities=21% Similarity=0.346 Sum_probs=64.2
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||.++. .+|+.+|+|++...... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEE
Confidence 367788999999999999984 46899999998643222 233467899999999999999999999999999998885
No 205
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=98.54 E-value=1.3e-07 Score=88.65 Aligned_cols=79 Identities=22% Similarity=0.375 Sum_probs=63.8
Q ss_pred HhhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
..++|+..+.||+|+||.||+|+.. .+..||+|.+.... .......|.+|+.++++++||||+++++++.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4567888999999999999999743 24579999876432 222345688999999999999999999999998
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..|+||
T Consensus 82 ~~~~lv~ 88 (288)
T cd05061 82 QPTLVVM 88 (288)
T ss_pred CCcEEEE
Confidence 8888875
No 206
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.54 E-value=3.6e-07 Score=83.96 Aligned_cols=76 Identities=20% Similarity=0.401 Sum_probs=63.6
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||+++.. +++.+|+|.++.... ....+.+.+|+.++++++||||+++++++.+++..|+||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEE
Confidence 4677889999999999999954 688999998854322 234467889999999999999999999999999999885
No 207
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.54 E-value=3e-07 Score=86.09 Aligned_cols=77 Identities=29% Similarity=0.513 Sum_probs=63.8
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+....||+|+||.||+|+.. +++.||+|++....... ...+.+.+|++++++++|||++++++++.+.+..++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP-VIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc-cccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 5777889999999999999965 58999999986432221 22356889999999999999999999999999888885
No 208
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.53 E-value=2.5e-07 Score=88.51 Aligned_cols=73 Identities=19% Similarity=0.309 Sum_probs=61.0
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||+||+|+. .+++.+|+|+++..........+.+.+|+.++.++ +||||+++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence 3699999999999995 45889999999754443444556788999999988 6999999999999999999986
No 209
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.53 E-value=2.3e-07 Score=87.47 Aligned_cols=77 Identities=27% Similarity=0.466 Sum_probs=63.3
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEecccccc--chhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETE--ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|+..+.||+|+||.||+|... +++.||+|.+...... .....+.+..|++++.+++||||+++++++.+.+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 666788999999999999954 6899999999654332 1122356778999999999999999999999999999886
No 210
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.53 E-value=2e-07 Score=86.43 Aligned_cols=77 Identities=30% Similarity=0.480 Sum_probs=63.1
Q ss_pred hcccccceeCccCcEEEEEEEcC-CC---CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SG---KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~---~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
.+|...+.||+|+||.||+|+.. ++ ..||+|.+.... .....++|..|+.++++++||||+++++++.++++.+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 45778899999999999999954 23 369999986432 2334578999999999999999999999999988888
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 82 lv~ 84 (269)
T cd05065 82 IIT 84 (269)
T ss_pred EEE
Confidence 875
No 211
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.53 E-value=6.5e-08 Score=92.46 Aligned_cols=83 Identities=25% Similarity=0.381 Sum_probs=71.7
Q ss_pred HHHhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 477 (482)
.+...||...+.||+|+|++||+|+ ...++.+|||++.+......+.++.+.+|-..|.++ .||.||+|+..|.+...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3455788999999999999999999 557999999999766555555667888999999999 89999999999999999
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
+|.|+
T Consensus 149 LYFvL 153 (604)
T KOG0592|consen 149 LYFVL 153 (604)
T ss_pred eEEEE
Confidence 99884
No 212
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.53 E-value=2.4e-07 Score=87.13 Aligned_cols=79 Identities=27% Similarity=0.428 Sum_probs=64.3
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCMF 479 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~ 479 (482)
.++|+..+.||+|+||.||+|+.. +++.+|+|.++..... ......+.+|+.++.+++||||+++++++.+. +..|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 356888899999999999999965 5889999998644322 22234678899999999999999999999887 7888
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 83 lv~ 85 (293)
T cd07843 83 MVM 85 (293)
T ss_pred EEe
Confidence 875
No 213
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.53 E-value=2.7e-07 Score=87.75 Aligned_cols=73 Identities=23% Similarity=0.364 Sum_probs=57.8
Q ss_pred ceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+.. +++.||+|+++..........+.+..|..++... +||||+++++++.+.+..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEE
Confidence 35899999999999964 5789999998653322223345677788888764 8999999999999999999886
No 214
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.52 E-value=3e-07 Score=88.01 Aligned_cols=73 Identities=18% Similarity=0.302 Sum_probs=59.7
Q ss_pred cceeCcc--CcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 409 KYCIGTG--GYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 409 ~~~ig~g--~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..+||+| +||+||+++. .+|+.||+|+++..... ....+.+.+|+++++.++|||||+++++|.+++..++||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 78 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 78 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence 4679999 7889999985 56899999998654322 223456788999999999999999999999999999885
No 215
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.52 E-value=2.2e-07 Score=85.64 Aligned_cols=76 Identities=29% Similarity=0.563 Sum_probs=61.7
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|+..+.||+|+||.||+++.. +++.+|+|.+........ ......+|+.++.+++||||+++++++.+.+..++||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~ 77 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVM 77 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccccccccccccccccccccccccc
Confidence 566789999999999999954 467899999976543322 2234456999999999999999999999999988875
No 216
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.52 E-value=2.7e-07 Score=87.78 Aligned_cols=73 Identities=22% Similarity=0.352 Sum_probs=57.5
Q ss_pred ceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+.. +++.||+|.++..........+.+..|.+++... +||||+++++++.+++..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 35999999999999954 5889999999754333333445666777777654 8999999999999999999986
No 217
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.52 E-value=2.6e-07 Score=87.33 Aligned_cols=75 Identities=33% Similarity=0.506 Sum_probs=61.0
Q ss_pred HHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
...++|+..+.+|+|+||.||+|+.. +|+.||+|+++..... ......+.+|++++++++||||+++++++.+.+
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~ 79 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQ 79 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheecCcc
Confidence 45678889999999999999999964 5889999998653322 223356788999999999999999999987755
No 218
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.52 E-value=6e-08 Score=86.66 Aligned_cols=80 Identities=25% Similarity=0.422 Sum_probs=66.0
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEE
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFC 472 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~ 472 (482)
.++++-+.+++ .+|+|.||.|-.+. +.+|..+|||++++.. .-.+..+.+|++++.+++ |+||++++++|
T Consensus 74 ~F~d~YkLt~e-----~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 74 KFEDMYKLTSE-----LLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred hHHHHHHhHHH-----HhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 45666665554 49999999998887 6789999999997542 234567889999999995 99999999999
Q ss_pred EeCCEEEEEC
Q 036034 473 LHRKCMFLIY 482 (482)
Q Consensus 473 ~~~~~~~lv~ 482 (482)
++++..||||
T Consensus 146 Edd~~FYLVf 155 (463)
T KOG0607|consen 146 EDDTRFYLVF 155 (463)
T ss_pred cccceEEEEE
Confidence 9999999996
No 219
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.52 E-value=2.2e-07 Score=88.86 Aligned_cols=83 Identities=24% Similarity=0.366 Sum_probs=65.7
Q ss_pred HHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CC
Q 036034 399 IIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH-RK 476 (482)
Q Consensus 399 ~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~ 476 (482)
+...+++|+..+.||+|+||.||+++. .+++.+|+|++..... .....+.+.+|++++.+++|||||++.++|.. .+
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 344677899999999999999999984 4789999998854322 22334678899999999999999999999876 45
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..|+||
T Consensus 84 ~~~lv~ 89 (328)
T cd07856 84 DIYFVT 89 (328)
T ss_pred cEEEEe
Confidence 666664
No 220
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.52 E-value=2.9e-07 Score=87.91 Aligned_cols=78 Identities=18% Similarity=0.279 Sum_probs=62.8
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||+||+|+.. +++.+|+|.+...........+.+..|..++... +||+|+++++++.+.+..|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4777889999999999999854 5789999998754333333445677888888877 5899999999999999999986
No 221
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.52 E-value=2.1e-07 Score=85.97 Aligned_cols=75 Identities=31% Similarity=0.560 Sum_probs=63.3
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+|...+.||+|+||.||+|... .++.+|+|.+.... ...++|.+|++++.+++||||++++++|.+.+..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 45778889999999999999964 58889999886432 23467999999999999999999999999988888875
No 222
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.52 E-value=2.2e-07 Score=85.71 Aligned_cols=74 Identities=26% Similarity=0.506 Sum_probs=60.6
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|...++..+|+|.+..... ..++|.+|+.++++++|||++++++++.+ +..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT 79 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEE
Confidence 46778889999999999999987888899999864332 23579999999999999999999998754 4556664
No 223
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=98.52 E-value=1.5e-07 Score=87.67 Aligned_cols=79 Identities=22% Similarity=0.389 Sum_probs=64.1
Q ss_pred HhhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
+.++|+..+.||+|+||.||+|... .+..+|+|.+.... ......+|.+|+.++..++|||||++++++.+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4577999999999999999998742 24679999885432 223346799999999999999999999999988
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
...++||
T Consensus 82 ~~~~lv~ 88 (277)
T cd05062 82 QPTLVIM 88 (277)
T ss_pred CCeEEEE
Confidence 8888875
No 224
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.52 E-value=3.7e-07 Score=85.32 Aligned_cols=76 Identities=17% Similarity=0.373 Sum_probs=59.6
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARL-LSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||+|+.. +|+.||+|+++..... ....++..|+.+ ++..+|||||++++++.+++..|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 6778889999999999999954 6999999998653221 122455566665 56668999999999999998888885
No 225
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.52 E-value=2.2e-07 Score=85.84 Aligned_cols=74 Identities=24% Similarity=0.505 Sum_probs=59.9
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+..+...||+|.+..... ..+.|.+|++++.+++||||+++++++.+ +..++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence 56888899999999999999976667799999864322 23678999999999999999999998754 4456664
No 226
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.51 E-value=2.2e-07 Score=85.66 Aligned_cols=75 Identities=24% Similarity=0.458 Sum_probs=61.7
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|...+.||+|+||.||+|....+..+|+|.+.... ...+.|.+|++++++++|+||+++++++.+ +..++||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 35688899999999999999997777889999875422 234679999999999999999999999887 5556654
No 227
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.51 E-value=3.1e-07 Score=89.09 Aligned_cols=80 Identities=26% Similarity=0.291 Sum_probs=63.5
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK---- 476 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 476 (482)
..++|...+.||+|+||.||+++. ..|+.||+|++.... ......+.+.+|+.++.+++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 457899999999999999999985 458899999986432 22234467889999999999999999999986543
Q ss_pred --EEEEEC
Q 036034 477 --CMFLIY 482 (482)
Q Consensus 477 --~~~lv~ 482 (482)
..|+||
T Consensus 98 ~~~~~lv~ 105 (359)
T cd07876 98 FQDVYLVM 105 (359)
T ss_pred cceeEEEE
Confidence 356664
No 228
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.51 E-value=4e-07 Score=84.24 Aligned_cols=79 Identities=19% Similarity=0.431 Sum_probs=61.7
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEecccccc--chhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETE--ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~ 478 (482)
.+|+..+.||+|+||.||.|+. .+++.||+|.+...... .....+.+.+|++++.+++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4678889999999999999995 45899999988543211 123456789999999999999999999988764 345
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 82 ~~v~ 85 (265)
T cd06652 82 SIFM 85 (265)
T ss_pred EEEE
Confidence 5553
No 229
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=98.51 E-value=2.4e-07 Score=85.99 Aligned_cols=70 Identities=24% Similarity=0.390 Sum_probs=56.7
Q ss_pred eeCccCcEEEEEEEcCC---CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARLPS---GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~~---~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|++.+ +..+|+|.++..... .....|.+|+.++.+++||||++++|++.+....++||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 74 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV--QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVM 74 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEE
Confidence 58999999999998543 457899988643321 23357899999999999999999999999988888875
No 230
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.51 E-value=1.7e-07 Score=87.72 Aligned_cols=76 Identities=20% Similarity=0.399 Sum_probs=64.1
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||++... .++.+|+|.+.... .....+.|.+|++++.+++||||+++++++...+..|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 5777888999999999999965 68999999886421 2233467999999999999999999999999999998885
No 231
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.51 E-value=1.9e-07 Score=86.30 Aligned_cols=70 Identities=31% Similarity=0.578 Sum_probs=56.5
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
.++...+.||+|+||.||.+... +|...|||.+...... ..+.+.+|++++.+++|||||+++|.....+
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~---~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~ 87 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP---TSESLEREIRILSRLNHPNIVQYYGSSSSRE 87 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch---hHHHHHHHHHHHHhCCCCCEEeeCCcccccc
Confidence 34666788999999999999954 4899999998654211 1567899999999999999999999855544
No 232
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.51 E-value=3.3e-07 Score=85.41 Aligned_cols=77 Identities=27% Similarity=0.426 Sum_probs=64.2
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.|+..+.||.|+||.||+|+.. +++.+|+|.+..... ....+.|.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 34666788999999999999954 588999998864322 233467999999999999999999999999999999986
No 233
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=98.51 E-value=1.9e-08 Score=88.90 Aligned_cols=74 Identities=31% Similarity=0.533 Sum_probs=64.0
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+-|++...+|+|+||.||++.. ..|+.+|+|.+..+ .+.++...||.||.+++.|.+|+++|.|.....++|||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM 107 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM 107 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence 3466778899999999999985 46999999988532 24578999999999999999999999999999999987
No 234
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.51 E-value=4.2e-07 Score=83.60 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=63.7
Q ss_pred cccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||.++ ..+++.+++|.+..... .....+++.+|++++++++|+||+++++++.+.+..++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEE
Confidence 36778899999999999888 44688999999864332 2234567899999999999999999999999999888875
No 235
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.50 E-value=2.9e-07 Score=87.86 Aligned_cols=78 Identities=18% Similarity=0.261 Sum_probs=62.4
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||+||+|+. .+|+.||+|.+...........+.+..|++++..+. |++|+++.+++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 366778999999999999995 468999999987543333334567888999998885 677888999999999999986
No 236
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.50 E-value=2.6e-07 Score=86.95 Aligned_cols=78 Identities=23% Similarity=0.385 Sum_probs=63.0
Q ss_pred hhcccccceeCccCcEEEEEEEcCC-----------------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCc
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPS-----------------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNI 465 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~-----------------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~ni 465 (482)
..+|...+.||+|+||.||+|+... +..||+|.+..... ....++|.+|++++.+++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCE
Confidence 3568888999999999999987432 24589999864432 2345789999999999999999
Q ss_pred cceeEEEEeCCEEEEEC
Q 036034 466 VKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 466 v~l~g~~~~~~~~~lv~ 482 (482)
++++++|..++..++||
T Consensus 82 ~~~~~~~~~~~~~~lv~ 98 (296)
T cd05051 82 ARLLGVCTVDPPLCMIM 98 (296)
T ss_pred eEEEEEEecCCCcEEEE
Confidence 99999999988888775
No 237
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.50 E-value=2.5e-07 Score=85.93 Aligned_cols=78 Identities=26% Similarity=0.575 Sum_probs=62.1
Q ss_pred HHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC---
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHR--- 475 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~--- 475 (482)
.+.+.|...+.||+|+||.||+|+. .+++.+|+|.+.... .....+.+|+.++.++ +||||++++++|.+.
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 3567788888999999999999985 458899999986432 2235788999999998 799999999999763
Q ss_pred ---CEEEEEC
Q 036034 476 ---KCMFLIY 482 (482)
Q Consensus 476 ---~~~~lv~ 482 (482)
+..|+||
T Consensus 79 ~~~~~~~iv~ 88 (272)
T cd06637 79 GMDDQLWLVM 88 (272)
T ss_pred CCCcEEEEEE
Confidence 3466764
No 238
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.50 E-value=8.6e-09 Score=91.11 Aligned_cols=205 Identities=20% Similarity=0.231 Sum_probs=116.2
Q ss_pred CCCCCEEeCcCCcccc--cCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCccccc-CCccCcCCCCCC
Q 036034 28 LSKLENLHLSSNSLVG--NIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGS-IPSTFGHLKRLK 104 (482)
Q Consensus 28 l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~~~~l~~l~~L~ 104 (482)
+..++.+||.+|.+++ .+..-+.+||.|+.|+|+.|.+...+...-..+.+|++|-|.+..+... ....+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 5678999999999884 3555678899999999999998765433324567899999988877543 445566788888
Q ss_pred EEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecc--cCCccCcCCCCCCEEEccCCccccCC
Q 036034 105 SLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTG--PIPSTLGHLNRIRILDLSENKLVGPI 182 (482)
Q Consensus 105 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~--~~~~~~~~l~~L~~L~l~~n~l~~~~ 182 (482)
+|+++.|.+.. +++..+.++...+.+.++++..|.... .....-..++++..+-+..|.+...-
T Consensus 150 elHmS~N~~rq--------------~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s 215 (418)
T KOG2982|consen 150 ELHMSDNSLRQ--------------LNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTES 215 (418)
T ss_pred hhhhccchhhh--------------hccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchh
Confidence 88888885431 222233333222233333322222110 00001112344555555555543211
Q ss_pred -CcCCcCCCCCCEEeccCCcccc-ccCccCcCCCCCCeeeccCCcccCCCCc------cCcCCCCCCEEEcC
Q 036034 183 -PSSVGHLTQLNTLNMYSNQING-SIPLEIGNLKRVEAVKLYDNKLDGPIPP------ELMNCSKLMELELG 246 (482)
Q Consensus 183 -~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~~~~L~~L~l~ 246 (482)
......++.+..|+|+.|++.. .....+.++++|..|.+.+|.+.+.+.. -++.+++++.|+=+
T Consensus 216 ~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNGs 287 (418)
T KOG2982|consen 216 SEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNGS 287 (418)
T ss_pred hcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEecCc
Confidence 1233445555666666666542 1234455666666677776666543221 23456666666433
No 239
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=98.50 E-value=2e-07 Score=87.83 Aligned_cols=77 Identities=23% Similarity=0.471 Sum_probs=62.2
Q ss_pred hcccccceeCccCcEEEEEEEcCC---------------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccce
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS---------------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKL 468 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~---------------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l 468 (482)
.+|...+.||+|+||.||+++... ...||+|.+.... .....+.|.+|++++.+++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 568888999999999999987431 2358999886432 22334679999999999999999999
Q ss_pred eEEEEeCCEEEEEC
Q 036034 469 YGFCLHRKCMFLIY 482 (482)
Q Consensus 469 ~g~~~~~~~~~lv~ 482 (482)
++++...+..++||
T Consensus 83 ~~~~~~~~~~~lv~ 96 (295)
T cd05097 83 LGVCVSDDPLCMIT 96 (295)
T ss_pred EEEEcCCCccEEEE
Confidence 99999998888885
No 240
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.50 E-value=5e-08 Score=90.89 Aligned_cols=76 Identities=32% Similarity=0.488 Sum_probs=62.6
Q ss_pred cccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.|.....||+|+||.||+|. ...++.||+|+++-+... ...++..+|+.++++++|+||.+++|.|..+..++++|
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~--deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE--DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcc--hhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 45556789999999999999 456889999999754332 34678899999999999999999999998887766654
No 241
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.50 E-value=4.7e-07 Score=83.85 Aligned_cols=77 Identities=26% Similarity=0.466 Sum_probs=62.0
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccch------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEEL------TSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
|.....||+|+||.||+|.. .+++.+|+|.+........ ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 55677899999999999985 4588999998864332211 2235688999999999999999999999998888
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 82 ~lv~ 85 (267)
T cd06628 82 NIFL 85 (267)
T ss_pred EEEE
Confidence 8875
No 242
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.49 E-value=4.6e-07 Score=84.78 Aligned_cols=77 Identities=27% Similarity=0.349 Sum_probs=64.4
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||+|+. .+|+.||+|++...... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence 367788899999999999995 46899999998653322 223467999999999999999999999999999998886
No 243
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.49 E-value=2.9e-07 Score=85.91 Aligned_cols=77 Identities=16% Similarity=0.322 Sum_probs=61.2
Q ss_pred hhcccccceeCccCcEEEEEEEcCC-----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-C
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPS-----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR-K 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~-----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~ 476 (482)
.++|...+.||+|+||.||+|.... +..||+|++.... .....+.+.+|+.++.+++||||+++++++.+. +
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 4678888999999999999999654 6788999886432 233457789999999999999999999998774 4
Q ss_pred EEEEE
Q 036034 477 CMFLI 481 (482)
Q Consensus 477 ~~~lv 481 (482)
..+++
T Consensus 83 ~~~~~ 87 (280)
T cd05043 83 PPFVL 87 (280)
T ss_pred CCEEE
Confidence 44544
No 244
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.49 E-value=2.2e-07 Score=86.44 Aligned_cols=69 Identities=26% Similarity=0.363 Sum_probs=55.1
Q ss_pred eeCccCcEEEEEEEcCC-------------------------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCc
Q 036034 411 CIGTGGYGSVYRARLPS-------------------------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNI 465 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~~-------------------------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~ni 465 (482)
.||+|+||.||+|++.. ...||+|.++... ....++|.+|+.++++++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 58999999999997421 1357889885432 1234678899999999999999
Q ss_pred cceeEEEEeCCEEEEEC
Q 036034 466 VKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 466 v~l~g~~~~~~~~~lv~ 482 (482)
|+++|+|.+.+..++||
T Consensus 79 v~~~~~~~~~~~~~lv~ 95 (274)
T cd05076 79 AFVHGVCVRGSENIMVE 95 (274)
T ss_pred eeEEEEEEeCCceEEEE
Confidence 99999999999988885
No 245
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.49 E-value=1.8e-07 Score=90.06 Aligned_cols=78 Identities=24% Similarity=0.437 Sum_probs=60.6
Q ss_pred hhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHR 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 475 (482)
.++|...+.||+|+||.||+|+. .+++.||||+++.... ......+.+|++++.++ +|||||+++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 35688899999999999999973 3467899999864332 22346788999999999 689999999988765
Q ss_pred C-EEEEEC
Q 036034 476 K-CMFLIY 482 (482)
Q Consensus 476 ~-~~~lv~ 482 (482)
+ ..++||
T Consensus 84 ~~~~~lv~ 91 (343)
T cd05103 84 GGPLMVIV 91 (343)
T ss_pred CCceEEEE
Confidence 4 455553
No 246
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.49 E-value=3.9e-07 Score=84.36 Aligned_cols=76 Identities=29% Similarity=0.558 Sum_probs=63.8
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+. .+++.+|+|.++... ......+.+|+.++..++||||+++++++.+.+..|+||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 4677788899999999999985 468899999986432 223356889999999999999999999999999998875
No 247
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.49 E-value=4.6e-07 Score=83.70 Aligned_cols=76 Identities=25% Similarity=0.570 Sum_probs=64.3
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||+|+||.||+|... +++.+|+|.++..... ....+.+.+|+.++++++|+||+++++++.+.+..++|+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEE
Confidence 667788999999999999854 6889999998754332 335678999999999999999999999999888888874
No 248
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.49 E-value=4.7e-07 Score=85.13 Aligned_cols=76 Identities=26% Similarity=0.444 Sum_probs=64.7
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.|+..+.||+|+||.||+|+.. +++.+|+|.+... .....+.|.+|++++++++||||+++++++..+...++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 56778889999999999999954 5889999998643 2334577999999999999999999999999988888886
No 249
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.49 E-value=5.8e-07 Score=84.69 Aligned_cols=76 Identities=21% Similarity=0.336 Sum_probs=64.6
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+|...+.||+|+||.||+|+. .+++.+|+|.+...... ..+.+.+|+.++.+++||||+++++++..++..++||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 5678888999999999999984 46889999998653322 2367889999999999999999999999999999886
No 250
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.49 E-value=3.4e-07 Score=86.55 Aligned_cols=78 Identities=24% Similarity=0.414 Sum_probs=63.3
Q ss_pred hhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHR 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 475 (482)
.++|...+.||+|+||.||+|+. ..+..+|+|.++.... ....+.|.+|+++++++ +||||++++++|...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 35788899999999999999973 1245789998864322 22346799999999999 799999999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..|+||
T Consensus 112 ~~~~lv~ 118 (302)
T cd05055 112 GPILVIT 118 (302)
T ss_pred CceEEEE
Confidence 9888875
No 251
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.49 E-value=1.7e-07 Score=87.39 Aligned_cols=76 Identities=29% Similarity=0.456 Sum_probs=62.8
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.|...+.||+|+||.||+|.. .+++.||+|.+...... ...+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch--HHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 456667799999999999985 45788999988643222 23467999999999999999999999999999888885
No 252
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.49 E-value=4.1e-07 Score=85.12 Aligned_cols=76 Identities=32% Similarity=0.553 Sum_probs=62.7
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 482 (482)
|+..+.||+|+||.||+|... +++.+|+|++.... ......+.+.+|++++.+++|||++++++++.+. +..++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 456778999999999999965 58899999997543 2223346788999999999999999999999988 7888875
No 253
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.48 E-value=4.3e-07 Score=84.48 Aligned_cols=76 Identities=33% Similarity=0.557 Sum_probs=63.8
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.+|.|+||.||+|+.. +++.+|+|.+.... .......+.+|++++++++||||+++++++.++...|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 5677788999999999999954 68899999986432 2234467899999999999999999999999999888875
No 254
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.48 E-value=3.5e-07 Score=84.06 Aligned_cols=74 Identities=34% Similarity=0.541 Sum_probs=64.0
Q ss_pred hcccccceeCccCcEEEEEEEcCC-CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||.||+|+... ++.+|+|.+..... .++|.+|++++++++||||+++++++.+++..|+||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 568888899999999999999654 78999999864321 478999999999999999999999999998888875
No 255
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.48 E-value=3.9e-07 Score=84.91 Aligned_cols=71 Identities=25% Similarity=0.389 Sum_probs=58.5
Q ss_pred eCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|+||+||++.. .+|+.+|+|.+...........+.+..|++++.+++||||+++++++...+..|+||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 72 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVM 72 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEE
Confidence 69999999999984 468999999986533333333456788999999999999999999999999888885
No 256
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.48 E-value=3.4e-07 Score=86.55 Aligned_cols=77 Identities=29% Similarity=0.574 Sum_probs=61.3
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCC--EEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGK--VVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
++|+..+.||+|+||.||+|+.. ++. .+|+|.++... .....+.|.+|++++.++ +||||+++++++.+.+..|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 56788899999999999999954 454 45777765322 223346789999999999 8999999999999988888
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 85 lv~ 87 (303)
T cd05088 85 LAI 87 (303)
T ss_pred EEE
Confidence 875
No 257
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.48 E-value=1.6e-07 Score=87.91 Aligned_cols=84 Identities=25% Similarity=0.471 Sum_probs=65.9
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFC 472 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 472 (482)
.++.+..+.++|+..+.||+|+||.||+++. ..++.+|+|.+..... ...++.+|+.++.++ +||||++++++|
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD----IDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc----hHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 3455667788999999999999999999985 4588999998754221 225688899999999 699999999998
Q ss_pred Ee-----CCEEEEEC
Q 036034 473 LH-----RKCMFLIY 482 (482)
Q Consensus 473 ~~-----~~~~~lv~ 482 (482)
.. ++..++||
T Consensus 85 ~~~~~~~~~~~~lv~ 99 (286)
T cd06638 85 YKKDVKNGDQLWLVL 99 (286)
T ss_pred eecccCCCCeEEEEE
Confidence 53 34567765
No 258
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.48 E-value=2.9e-07 Score=85.63 Aligned_cols=77 Identities=22% Similarity=0.499 Sum_probs=62.4
Q ss_pred hcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
++|.....||+|+||.||+|+.+ +.+.+|+|.+..... ....+.|.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 56778889999999999999853 245789998754321 1234679999999999999999999999998888
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 83 ~~lv~ 87 (275)
T cd05046 83 HYMIL 87 (275)
T ss_pred ceEEE
Confidence 88875
No 259
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.48 E-value=4.1e-07 Score=87.61 Aligned_cols=71 Identities=27% Similarity=0.343 Sum_probs=58.2
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
.+|...+.||+|+||.||+|+. .+|+.||+|++..... .....+.+.+|++++.+++||||+++++++...
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 86 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSA 86 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheeccc
Confidence 6788889999999999999995 4689999999864322 222335688999999999999999999998764
No 260
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.48 E-value=2.6e-07 Score=86.42 Aligned_cols=77 Identities=26% Similarity=0.412 Sum_probs=61.2
Q ss_pred hcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
.+|...+.||+|+||.||+|+.. .++.||+|++..... ....+.|.+|+.++..++|||||++++++.+.+.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE--GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 34666788999999999999853 246899999864322 2234678999999999999999999999998887
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++++
T Consensus 83 ~~~~~ 87 (283)
T cd05091 83 LSMIF 87 (283)
T ss_pred eEEEE
Confidence 77663
No 261
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.48 E-value=6.5e-07 Score=82.55 Aligned_cols=76 Identities=33% Similarity=0.638 Sum_probs=64.8
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.+|+|+||.||+|.. .+++.+|+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5688889999999999999995 4578899999864322 24578999999999999999999999999999988875
No 262
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.48 E-value=4.1e-07 Score=90.57 Aligned_cols=65 Identities=23% Similarity=0.417 Sum_probs=53.7
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
.++|...+.||+|+||.||+|+. ..++.||||++.... ....+|+.++++++|||||++++++..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~ 130 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYT 130 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEee
Confidence 45789999999999999999995 468899999885321 234579999999999999999998754
No 263
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.48 E-value=3.8e-07 Score=90.72 Aligned_cols=70 Identities=23% Similarity=0.313 Sum_probs=59.5
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..|...+.||+|+||.||+++.. .++.||||.... ..+.+|++++++++|||||++++++..++..++||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 35888899999999999999964 478899996321 34668999999999999999999999998888875
No 264
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.48 E-value=4.8e-07 Score=85.77 Aligned_cols=79 Identities=29% Similarity=0.467 Sum_probs=64.2
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..|+..+.||+|+||.||+|+. .++..+|+|.+...........+++.+|++++++++|||++++.+++.+.+..++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 3466677899999999999995 458889999886433333334567889999999999999999999999998888875
No 265
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.48 E-value=2.9e-07 Score=86.22 Aligned_cols=77 Identities=29% Similarity=0.533 Sum_probs=64.5
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||+|... +++.||+|+++.... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 5778889999999999999964 588999998864322 2233467899999999999999999999999999888885
No 266
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=98.48 E-value=2.9e-07 Score=85.84 Aligned_cols=78 Identities=27% Similarity=0.432 Sum_probs=63.3
Q ss_pred hhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
.++|...+.||+|+||.||+|... .+..||+|....... ......|.+|+.++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS--EQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 467888899999999999999864 356789998754322 223357999999999999999999999999888
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 83 ~~~lv~ 88 (277)
T cd05036 83 PRFILL 88 (277)
T ss_pred CcEEEE
Confidence 888875
No 267
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.47 E-value=2e-08 Score=88.78 Aligned_cols=229 Identities=25% Similarity=0.262 Sum_probs=146.6
Q ss_pred CCCCCEEeCcCCcccccC-Ccccc-CCCCCCeeecccCccee--ccCccccCCCCCCEEEccCCcccccCCccCcCCCCC
Q 036034 28 LSKLENLHLSSNSLVGNI-PSTLG-HLTQLTTLAIASNHINV--SIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRL 103 (482)
Q Consensus 28 l~~L~~L~L~~n~l~~~~-~~~~~-~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L 103 (482)
...++.|.+.++.|...- ...|+ .++.++.+||..|.|+. .+...+.+|+.|++|+|+.|.+...+..--..+.+|
T Consensus 44 ~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl 123 (418)
T KOG2982|consen 44 LRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNL 123 (418)
T ss_pred ccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccce
Confidence 344557777777665321 12233 36779999999999984 334446789999999999999875433222466799
Q ss_pred CEEeCcCCccccc-CCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCc--cCcCCCCCCEEEccCCcccc
Q 036034 104 KSLDLSQNKLVGP-IPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPS--TLGHLNRIRILDLSENKLVG 180 (482)
Q Consensus 104 ~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~--~~~~l~~L~~L~l~~n~l~~ 180 (482)
+.|-|.+..+... ....+..+|.+++|+++.|++ +.+.++.+.+...-+. .+...+.+..+....|++..
T Consensus 124 ~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~-------rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r 196 (418)
T KOG2982|consen 124 RVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSL-------RQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSR 196 (418)
T ss_pred EEEEEcCCCCChhhhhhhhhcchhhhhhhhccchh-------hhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHh
Confidence 9999999887643 234467788888888887754 4455555554421111 11122222222333333332
Q ss_pred CCCcCCcCCCCCCEEeccCCcccccc-CccCcCCCCCCeeeccCCcccCC-CCccCcCCCCCCEEEcCCCcCcccCCc--
Q 036034 181 PIPSSVGHLTQLNTLNMYSNQINGSI-PLEIGNLKRVEAVKLYDNKLDGP-IPPELMNCSKLMELELGNNLLRGSIPS-- 256 (482)
Q Consensus 181 ~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~-- 256 (482)
-++++..+.+..|.+...- -.....++.+.-|++..|+++.. --+.+..++.|..|.++++.+.+.+-.
T Consensus 197 -------~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~e 269 (418)
T KOG2982|consen 197 -------IFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGE 269 (418)
T ss_pred -------hcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCc
Confidence 2467777888888765322 23444567777889999988753 224577899999999999988654322
Q ss_pred ----cccCccCCCEEecc
Q 036034 257 ----EIGKLQELYYLDLS 270 (482)
Q Consensus 257 ----~~~~~~~L~~L~l~ 270 (482)
-++++++++.|+=+
T Consensus 270 rr~llIaRL~~v~vLNGs 287 (418)
T KOG2982|consen 270 RRFLLIARLTKVQVLNGS 287 (418)
T ss_pred ceEEEEeeccceEEecCc
Confidence 24678888887654
No 268
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.47 E-value=3.2e-07 Score=85.77 Aligned_cols=77 Identities=30% Similarity=0.562 Sum_probs=62.3
Q ss_pred hcccccceeCccCcEEEEEEEcCC------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
++|+..+.||+|+||.||+|.... ...||+|.+.... .....++|.+|++++.+++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 467788899999999999998532 2578999886432 22334679999999999999999999999998888
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.+++|
T Consensus 83 ~~~~~ 87 (283)
T cd05048 83 TCMLF 87 (283)
T ss_pred eEEEE
Confidence 88775
No 269
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.47 E-value=3.7e-07 Score=85.74 Aligned_cols=76 Identities=28% Similarity=0.477 Sum_probs=60.4
Q ss_pred cccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
+|...+.||+|+||.||+|+.. ....+|+|.+..... ....+++.+|+.++++++|||||+++++|...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 3667788999999999999842 235688888754322 23346799999999999999999999999988888
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 79 ~lv~ 82 (290)
T cd05045 79 LLIV 82 (290)
T ss_pred EEEE
Confidence 8774
No 270
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.47 E-value=3e-07 Score=86.67 Aligned_cols=77 Identities=21% Similarity=0.414 Sum_probs=62.2
Q ss_pred hcccccceeCccCcEEEEEEEcC-----------------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCcc
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-----------------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIV 466 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-----------------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv 466 (482)
++|+..+.||+|+||.||+++.. ++..+|+|++.... .....++|.+|++++.+++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 46888899999999999998532 23468999886432 223346899999999999999999
Q ss_pred ceeEEEEeCCEEEEEC
Q 036034 467 KLYGFCLHRKCMFLIY 482 (482)
Q Consensus 467 ~l~g~~~~~~~~~lv~ 482 (482)
++++++...+..++||
T Consensus 83 ~~~~~~~~~~~~~lv~ 98 (296)
T cd05095 83 RLLAVCITSDPLCMIT 98 (296)
T ss_pred eEEEEEecCCccEEEE
Confidence 9999999988888875
No 271
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.47 E-value=4.8e-07 Score=84.53 Aligned_cols=77 Identities=30% Similarity=0.496 Sum_probs=61.6
Q ss_pred hcccccceeCccCcEEEEEEEcC-----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH--RK 476 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~ 476 (482)
++|...+.||+|+||.||+|++. .+..+|||.+...... ...++|.+|++++++++||||+++++++.. +.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 45666788999999999999853 3678999998654322 345789999999999999999999999887 45
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 82 ~~~lv~ 87 (284)
T cd05038 82 SLRLIM 87 (284)
T ss_pred ceEEEE
Confidence 666664
No 272
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.47 E-value=7.4e-07 Score=82.50 Aligned_cols=78 Identities=22% Similarity=0.443 Sum_probs=61.2
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEecccccc--chhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETE--ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCMF 479 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~ 479 (482)
+|...+.||+|+||.||+|.. .+++.+|+|.+...... ..+..+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 577889999999999999985 46889999988643221 223446789999999999999999999988763 4556
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 83 l~~ 85 (266)
T cd06651 83 IFM 85 (266)
T ss_pred EEE
Confidence 653
No 273
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.47 E-value=5.5e-07 Score=84.16 Aligned_cols=74 Identities=26% Similarity=0.442 Sum_probs=61.9
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|+..+.||+|+||.||+|+.. ++..+|+|.+... .....+.|.+|+++++.++||||++++++|..++..|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEE
Confidence 566778999999999999964 4778899988542 2234577999999999999999999999999999888875
No 274
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.47 E-value=5.9e-07 Score=86.63 Aligned_cols=80 Identities=28% Similarity=0.351 Sum_probs=64.3
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEE
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCL 473 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 473 (482)
..+++....++|...+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|++++.+++||||+++++++.
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 3455666788999999999999999999984 5688999999864321 2223466889999999999999999999886
Q ss_pred eC
Q 036034 474 HR 475 (482)
Q Consensus 474 ~~ 475 (482)
..
T Consensus 87 ~~ 88 (345)
T cd07877 87 PA 88 (345)
T ss_pred ec
Confidence 53
No 275
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.46 E-value=4.1e-07 Score=84.26 Aligned_cols=77 Identities=29% Similarity=0.455 Sum_probs=63.1
Q ss_pred hcccccceeCccCcEEEEEEEcC-CC---CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SG---KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~---~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
.+|+..+.||+|+||.||+|+.. ++ ..+|+|.++... .....+.|.+|++++.+++||||+++.+++.+.+..|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 46778899999999999999964 33 368999886432 2233567999999999999999999999999999888
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 83 lv~ 85 (268)
T cd05063 83 IIT 85 (268)
T ss_pred EEE
Confidence 885
No 276
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.46 E-value=6.2e-07 Score=84.07 Aligned_cols=76 Identities=22% Similarity=0.302 Sum_probs=61.3
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--EEEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK--CMFLI 481 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv 481 (482)
+|...+.||.|++|.||+|... +++.+|+|.+...... .....+.+|++++++++||||++++++|.+.+ ..++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 5777889999999999999964 5889999998643221 33467999999999999999999999987643 56776
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 80 ~ 80 (287)
T cd06621 80 M 80 (287)
T ss_pred E
Confidence 4
No 277
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.46 E-value=4.2e-07 Score=85.21 Aligned_cols=76 Identities=22% Similarity=0.367 Sum_probs=61.4
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|.....||+|+||.||+++. .+++.+|+|.+...... .....+.+|+.++.++. |||||++++++..++..++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 455567899999999999995 45899999998643322 33467899999999996 999999999998887777764
No 278
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.45 E-value=4.7e-07 Score=85.81 Aligned_cols=77 Identities=25% Similarity=0.433 Sum_probs=62.8
Q ss_pred hcccccceeCccCcEEEEEEEcC--------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLH 474 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 474 (482)
++|...+.||+|+||.||+++.. .+..+|+|.++.... ....+++.+|++++.++ +||||++++++|.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC--hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 57888999999999999999742 235799999865322 23346788999999999 79999999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
.+..|+||
T Consensus 96 ~~~~~lv~ 103 (307)
T cd05098 96 DGPLYVIV 103 (307)
T ss_pred CCceEEEE
Confidence 99988885
No 279
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=98.45 E-value=4.6e-07 Score=83.06 Aligned_cols=71 Identities=31% Similarity=0.566 Sum_probs=60.2
Q ss_pred ceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||++...+++.||+|.+...... ...+.|.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 71 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVM 71 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEE
Confidence 358999999999999766999999988643322 34468999999999999999999999999998888875
No 280
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.45 E-value=5.5e-07 Score=84.26 Aligned_cols=76 Identities=33% Similarity=0.572 Sum_probs=59.8
Q ss_pred hcccccceeCccCcEEEEEEEcC-----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--C
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--K 476 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~ 476 (482)
.+|...+.||+|+||.||+++++ +++.||+|++.... ....+.|.+|++++.+++|||||++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 35777889999999999999842 47889999986432 23356899999999999999999999987653 3
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 81 ~~~lv~ 86 (284)
T cd05081 81 NLRLVM 86 (284)
T ss_pred ceEEEE
Confidence 456664
No 281
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.45 E-value=6.3e-07 Score=84.44 Aligned_cols=76 Identities=22% Similarity=0.378 Sum_probs=64.4
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..|...+.||.|+||.||+|.. .+++.||+|.+..... ...+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 4588889999999999999984 5789999999864322 23467889999999999999999999999999988885
No 282
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.45 E-value=3.9e-07 Score=96.32 Aligned_cols=82 Identities=13% Similarity=0.348 Sum_probs=65.2
Q ss_pred HHHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--C
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--K 476 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~ 476 (482)
.....+|...+.||+|+||.||+++.. .+..+|+|.+...... ......|..|+.++.+++|||||++++++.+. +
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 345568999999999999999999954 5778999998643322 23346799999999999999999999988653 5
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..||||
T Consensus 88 ~lyIVM 93 (1021)
T PTZ00266 88 KLYILM 93 (1021)
T ss_pred EEEEEE
Confidence 677775
No 283
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.45 E-value=4.4e-07 Score=84.80 Aligned_cols=76 Identities=30% Similarity=0.514 Sum_probs=62.8
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|+..+.||.|++|.||+|+. .+|+.||+|++..... .....+.+.+|++++++++|||++++++++.+++..|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~ 77 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVF 77 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEE
Confidence 45677899999999999985 4699999999864332 2223357889999999999999999999999999988885
No 284
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.45 E-value=7.7e-07 Score=81.75 Aligned_cols=77 Identities=21% Similarity=0.399 Sum_probs=64.3
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||++.. .+++.+|+|++...... ....+.+.+|++++++++|||++++++.+..++..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEE
Confidence 367788999999999999985 46889999998654322 234578999999999999999999999999888888885
No 285
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.45 E-value=4.7e-07 Score=86.27 Aligned_cols=81 Identities=14% Similarity=0.074 Sum_probs=58.5
Q ss_pred HHHHhhcccccceeCccCcEEEEEEEcC--CCCEEEEEEeccccc--cchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 399 IIEATEDFHIKYCIGTGGYGSVYRARLP--SGKVVALKKLHCSET--EELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 399 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~--~~~~vavK~l~~~~~--~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
.....++|...+.||+|+||+||+|+.. +++.+|||++..... ......+.|.+|++++.+++|+|+|+.+..+
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3445577999999999999999999854 577789998753211 1222346799999999999999999633222
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
+..||||
T Consensus 91 -~~~~LVm 97 (365)
T PRK09188 91 -GKDGLVR 97 (365)
T ss_pred -CCcEEEE
Confidence 3456664
No 286
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.45 E-value=4.2e-07 Score=84.01 Aligned_cols=76 Identities=18% Similarity=0.256 Sum_probs=64.0
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||++... +++.+|+|++..... ....+++.+|++++++++||||+++++++......++|+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 5677788999999999999965 688999999865432 234467899999999999999999999999998888875
No 287
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.45 E-value=5.8e-07 Score=85.54 Aligned_cols=73 Identities=22% Similarity=0.328 Sum_probs=58.1
Q ss_pred ceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+.. +|+.||+|.++..........+.+..|++++... +||||+++++++.+.+..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence 36999999999999964 5889999998653322223345677788888755 8999999999999999999986
No 288
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.45 E-value=4.8e-07 Score=83.43 Aligned_cols=74 Identities=23% Similarity=0.479 Sum_probs=59.5
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|.....||+|+||.||+|....+..+|+|.+..... ..+.|.+|++++++++|||++++++++.+ +..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEE
Confidence 45777889999999999999987777899998754322 23678999999999999999999998754 4556664
No 289
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.45 E-value=6.9e-07 Score=86.55 Aligned_cols=80 Identities=24% Similarity=0.279 Sum_probs=63.2
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK---- 476 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 476 (482)
..++|...+.||+|+||.||+++. ..++.+|+|++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 456899999999999999999984 3588999999864322 2233467889999999999999999999886543
Q ss_pred --EEEEEC
Q 036034 477 --CMFLIY 482 (482)
Q Consensus 477 --~~~lv~ 482 (482)
..|+||
T Consensus 94 ~~~~~lv~ 101 (355)
T cd07874 94 FQDVYLVM 101 (355)
T ss_pred cceeEEEh
Confidence 456664
No 290
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.45 E-value=2.2e-07 Score=86.60 Aligned_cols=79 Identities=22% Similarity=0.383 Sum_probs=65.7
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv 481 (482)
++|...+.||+|+||.||+|+.. +|+.+|+|++...........+.+.+|++++.+++ ||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36778889999999999999954 68999999986543333334467889999999998 99999999999998888887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 81 ~ 81 (280)
T cd05581 81 L 81 (280)
T ss_pred E
Confidence 5
No 291
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.44 E-value=3.7e-07 Score=85.76 Aligned_cols=84 Identities=26% Similarity=0.494 Sum_probs=66.8
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFC 472 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 472 (482)
..+++..+.++|...+.||+|+||.||+++. .+++.+|+|.+..... ....+.+|+.++.++ +|||+++++++|
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD----VDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc----HHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 4456667788999999999999999999995 4688999999854321 235678899999999 799999999999
Q ss_pred EeCC-----EEEEEC
Q 036034 473 LHRK-----CMFLIY 482 (482)
Q Consensus 473 ~~~~-----~~~lv~ 482 (482)
...+ ..|+||
T Consensus 89 ~~~~~~~~~~~~lv~ 103 (291)
T cd06639 89 YKADKLVGGQLWLVL 103 (291)
T ss_pred EeccccCCCeeEEEE
Confidence 7643 456664
No 292
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.44 E-value=6.2e-07 Score=90.34 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=62.1
Q ss_pred cccccceeCccCcEEEEEEEcC-C-CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-S-GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~-~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.|...+.||+|+||.||+|... + ++.||+|.+... +......+.+|+++++.++|||||+++++|.+.+..||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 4888899999999999999843 3 677888876432 2233456888999999999999999999999999999986
No 293
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.44 E-value=4.1e-07 Score=83.64 Aligned_cols=77 Identities=21% Similarity=0.460 Sum_probs=63.4
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||+|... +|..+|+|.+..... .....+.+.+|++++++++||||+++++.+.+.+..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEE
Confidence 3667888999999999999964 588899999865322 1223467889999999999999999999999998888875
No 294
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.43 E-value=3.9e-07 Score=87.80 Aligned_cols=72 Identities=28% Similarity=0.362 Sum_probs=58.1
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
..+.|...+.||+|+||.||+|+. .+++.||||.+.... ......+.+.+|++++.+++||||+++++++..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMKHENVIGLLDVFTP 85 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcc
Confidence 456788889999999999999984 568899999986432 122334568899999999999999999998754
No 295
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.43 E-value=1e-06 Score=81.51 Aligned_cols=79 Identities=22% Similarity=0.436 Sum_probs=61.9
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccc--cchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--EE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSET--EELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK--CM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~ 478 (482)
.+|...+.||+|+||.||+|+. .++..+|+|.+..... ......+.|.+|++++++++||||+++++++.+.+ ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688889999999999999995 4689999998753221 12334568999999999999999999999987643 45
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 82 ~~v~ 85 (264)
T cd06653 82 SIFV 85 (264)
T ss_pred EEEE
Confidence 5553
No 296
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.43 E-value=5.6e-07 Score=83.47 Aligned_cols=70 Identities=21% Similarity=0.351 Sum_probs=56.1
Q ss_pred eeCccCcEEEEEEEcCC---CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARLPS---GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~~---~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|+..+ ...+|+|.+.... .......|.+|+++++.++||||++++++|.+.+..++||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~ 74 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVL 74 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEE
Confidence 58999999999997533 3467888775322 2233467899999999999999999999999998888885
No 297
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.43 E-value=7.5e-07 Score=84.47 Aligned_cols=79 Identities=37% Similarity=0.540 Sum_probs=62.4
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCMF 479 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~ 479 (482)
.++|...+.||+|+||.||+|+. .+|+.||+|.+....... .....+.+|++++.+++||||+++++++.+. +..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 46788899999999999999995 468999999986433222 1223567899999999999999999998765 4567
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 85 lv~ 87 (309)
T cd07845 85 LVM 87 (309)
T ss_pred EEE
Confidence 764
No 298
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.43 E-value=6.7e-07 Score=85.47 Aligned_cols=73 Identities=22% Similarity=0.271 Sum_probs=55.3
Q ss_pred ceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHH-HHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKA-RLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~-~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+.. +++.+|+|++.............+..|. .++..++||||+++++++.+.+..|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEE
Confidence 35999999999999954 5788999998643322222233444554 4567899999999999999999999885
No 299
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.43 E-value=6.4e-07 Score=84.03 Aligned_cols=76 Identities=28% Similarity=0.576 Sum_probs=62.1
Q ss_pred hcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
.+|...+.+|+|+||+||++... ++..+|+|.+.... ....+.|.+|++++.+++||||++++++|.+.+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 46778899999999999999842 24568999885422 2334679999999999999999999999999888
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 82 ~~lv~ 86 (288)
T cd05093 82 LIMVF 86 (288)
T ss_pred cEEEE
Confidence 88875
No 300
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.43 E-value=6.7e-07 Score=86.14 Aligned_cols=74 Identities=24% Similarity=0.331 Sum_probs=59.7
Q ss_pred HhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
..++|+..+.||+|+||.||+|. ..++..||||++.... ......+.+.+|++++.+++||||+++++++...+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL 87 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence 45678889999999999999998 4578999999985432 12223456889999999999999999999987653
No 301
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.43 E-value=6.9e-07 Score=82.45 Aligned_cols=71 Identities=25% Similarity=0.433 Sum_probs=59.7
Q ss_pred eCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||.|+||.||+++.. +++.+|+|.+...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 72 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLM 72 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEE
Confidence 699999999999964 48899999986544333344577999999999999999999999999988888875
No 302
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.43 E-value=6.6e-07 Score=85.81 Aligned_cols=78 Identities=26% Similarity=0.404 Sum_probs=62.7
Q ss_pred cccccceeCccCcEEEEEEEc----CCCCEEEEEEecccccc-chhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHCSETE-ELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~l~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 478 (482)
+|...+.||+|+||.||+++. .+++.+|+|++...... .....+.+.+|++++.++ +||||+++++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 467788999999999999874 35789999998643221 223346688999999999 499999999999999998
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 81 ~lv~ 84 (332)
T cd05614 81 HLIL 84 (332)
T ss_pred EEEE
Confidence 8885
No 303
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.42 E-value=7.2e-07 Score=84.94 Aligned_cols=69 Identities=26% Similarity=0.472 Sum_probs=54.1
Q ss_pred cceeCccCcEEEEEEEcC---CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCEEEEEC
Q 036034 409 KYCIGTGGYGSVYRARLP---SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH--RKCMFLIY 482 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ 482 (482)
...||+|+||.||+|+.. .++.+|+|.+..... ...+.+|++++++++|||||++++++.+ ....++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 357999999999999854 467899999864321 2457889999999999999999998865 34556654
No 304
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.42 E-value=8.2e-07 Score=83.35 Aligned_cols=77 Identities=30% Similarity=0.544 Sum_probs=56.2
Q ss_pred cccccceeCccCcEEEEEEEc-C-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC---CCCCccceeEEEEe-----
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-P-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI---RHRNIVKLYGFCLH----- 474 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~~----- 474 (482)
+|...+.||+|+||.||+|+. . +++.||+|+++...... .....+.+|++++..+ +||||++++++|..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 577888999999999999985 3 46789999986433222 2234566777777665 69999999999863
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
....++||
T Consensus 81 ~~~~~lv~ 88 (290)
T cd07862 81 ETKLTLVF 88 (290)
T ss_pred CCcEEEEE
Confidence 34466664
No 305
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.42 E-value=6.9e-07 Score=84.00 Aligned_cols=76 Identities=24% Similarity=0.352 Sum_probs=63.8
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..|...+.||+|+||.||+|.. .+++.+|+|.+.... ....+.+.+|+.++.+++||||++++++|...+..|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 5788889999999999999984 468899999985322 223467899999999999999999999999998888875
No 306
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.42 E-value=9.2e-07 Score=81.62 Aligned_cols=76 Identities=26% Similarity=0.422 Sum_probs=64.7
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|++|.||+|+.. +++.+|+|++...... ...+.|.+|++.+.+++||||+++++++...+..++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 5777889999999999999965 5899999998653321 34578999999999999999999999999999988875
No 307
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.42 E-value=8.1e-07 Score=84.21 Aligned_cols=74 Identities=26% Similarity=0.458 Sum_probs=59.0
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
..++|...+.||+|+||.||+|+. .+++.||+|.+....... .....+.+|++++++++||||++++++|...+
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 84 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKA 84 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHHHHHhCCCCCccceEEEEeccc
Confidence 445788899999999999999995 468999999886432221 22345678999999999999999999987754
No 308
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.41 E-value=9e-08 Score=85.28 Aligned_cols=81 Identities=26% Similarity=0.370 Sum_probs=62.7
Q ss_pred HHhhcccccceeCccCcEEEEEEEcC---CCC--EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe-
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLP---SGK--VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH- 474 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~---~~~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~- 474 (482)
.....|+....||+|+||.||++.-+ +.+ .+|+|.++..+... +-...-++|+.++++++|||||.+..++.+
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~ 99 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELKHPNVISLVKVFLSH 99 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhcCCcchhHHHHHhcc
Confidence 34456888888999999999999632 223 68999997654433 223567899999999999999999999888
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
+...+++|
T Consensus 100 d~~v~l~f 107 (438)
T KOG0666|consen 100 DKKVWLLF 107 (438)
T ss_pred CceEEEEe
Confidence 66777764
No 309
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.41 E-value=6.4e-07 Score=83.17 Aligned_cols=71 Identities=25% Similarity=0.498 Sum_probs=55.9
Q ss_pred ccccceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 406 FHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
|...+.||+|+||.||+|+... +..+|+|+++.... .....+.|.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 75 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASS 75 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCc
Confidence 4567789999999999998532 36799999865322 22345679999999999999999999999876553
No 310
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.41 E-value=7.6e-07 Score=86.56 Aligned_cols=80 Identities=23% Similarity=0.269 Sum_probs=63.0
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK---- 476 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 476 (482)
..++|...+.||+|+||.||+++. ..++.||||++.... ......+.+.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 356799999999999999999984 458899999986432 22233467889999999999999999999876533
Q ss_pred --EEEEEC
Q 036034 477 --CMFLIY 482 (482)
Q Consensus 477 --~~~lv~ 482 (482)
..|+||
T Consensus 101 ~~~~~lv~ 108 (364)
T cd07875 101 FQDVYIVM 108 (364)
T ss_pred cCeEEEEE
Confidence 457765
No 311
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.41 E-value=4.3e-09 Score=103.57 Aligned_cols=119 Identities=31% Similarity=0.372 Sum_probs=56.3
Q ss_pred CCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCcc-ccCCCCCCEEEcc
Q 036034 55 LTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSS-LGHLTQLTTLNMR 133 (482)
Q Consensus 55 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~l~ 133 (482)
|...+.++|.+. .+..++.-++.|++|+|++|+++.. +.+..+++|++|||++|.+. .+|.. ... ..|+.|.++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~g-c~L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVG-CKLQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhh-hhheeeeec
Confidence 333344444443 2333444455566666666665522 24555566666666666555 22321 111 225555555
Q ss_pred cccCcc-----cccCcCEEEcccCeeccc-CCccCcCCCCCCEEEccCCcc
Q 036034 134 SNLINA-----SLVNLTSLSLHYNNLTGP-IPSTLGHLNRIRILDLSENKL 178 (482)
Q Consensus 134 ~n~i~~-----~~~~L~~L~l~~n~~~~~-~~~~~~~l~~L~~L~l~~n~l 178 (482)
+|.++. .+.+|+.||+++|-+.+. --..++.+..|+.|+|.+|.+
T Consensus 241 nN~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 241 NNALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ccHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 555542 244555555555554431 112233344455555555544
No 312
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=98.41 E-value=5.9e-07 Score=83.65 Aligned_cols=77 Identities=19% Similarity=0.371 Sum_probs=63.1
Q ss_pred hcccccceeCccCcEEEEEEEcCC------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
++|...+.||+|+||.||+|.... +..+|+|.+.... .......|.+|+.++..++||||+++++++.+.+.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 568888999999999999998532 3679999985432 22234678999999999999999999999999888
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 84 ~~~v~ 88 (277)
T cd05032 84 TLVVM 88 (277)
T ss_pred cEEEE
Confidence 88875
No 313
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.41 E-value=4.6e-07 Score=85.20 Aligned_cols=81 Identities=22% Similarity=0.443 Sum_probs=64.6
Q ss_pred HHHhhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFC 472 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 472 (482)
....++|+..+.||+|+||.||+|... ....+|+|.+..... .+...++.+|++++.++ +||||++++++|
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 334567888899999999999999853 235789998864322 23346789999999999 799999999999
Q ss_pred EeCCEEEEEC
Q 036034 473 LHRKCMFLIY 482 (482)
Q Consensus 473 ~~~~~~~lv~ 482 (482)
.+++..++||
T Consensus 86 ~~~~~~~li~ 95 (293)
T cd05053 86 TQEGPLYVVV 95 (293)
T ss_pred cCCCCeEEEE
Confidence 9988888875
No 314
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.40 E-value=5.1e-07 Score=87.45 Aligned_cols=71 Identities=17% Similarity=0.245 Sum_probs=59.5
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
..+|...+.||+|+||.||+|+.. .++.||+|.... .....|+.++.+++|||||++++++.+.+..++|
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~---------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK---------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc---------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 457999999999999999999964 477899997532 1234689999999999999999999999988887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 136 ~ 136 (357)
T PHA03209 136 L 136 (357)
T ss_pred E
Confidence 5
No 315
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.40 E-value=4.7e-07 Score=83.91 Aligned_cols=70 Identities=21% Similarity=0.414 Sum_probs=55.0
Q ss_pred eeCccCcEEEEEEEcCCC---CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARLPSG---KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~~~---~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|+..++ ..+++|.+..... ....+.|.+|+.+++.++|||||+++++|.+....|+||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~ 74 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS--SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVF 74 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC--hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEE
Confidence 589999999999985433 3456676643221 233478999999999999999999999999998888885
No 316
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.40 E-value=3.4e-07 Score=85.63 Aligned_cols=76 Identities=29% Similarity=0.509 Sum_probs=62.4
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|+..+.||+|+||.||+|+. .+|+.+|+|+++.... .......+.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEE
Confidence 66778899999999999995 4689999999864322 2222356788999999999999999999999988888874
No 317
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=98.40 E-value=4.5e-07 Score=84.05 Aligned_cols=79 Identities=22% Similarity=0.323 Sum_probs=67.8
Q ss_pred hcccccceeCccCcEEEEEEEcCC-CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+|...+.+|+|..|+||.+++.+ +..+|+|++++......+.......|-+|++.++||.++.+++.+.+++..++||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 456677889999999999999754 5789999998766555555667788999999999999999999999999999986
No 318
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=98.40 E-value=1.1e-07 Score=93.86 Aligned_cols=68 Identities=29% Similarity=0.589 Sum_probs=55.8
Q ss_pred ccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 406 FHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
+...+.+|+|+||.||+|+ ...|+.||||..+... ....++...+|++++++++|||||++.+.-.+.
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~ 83 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETK 83 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCcc
Confidence 4456779999999999999 5679999999986543 233457889999999999999999988875443
No 319
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.39 E-value=1.2e-06 Score=80.38 Aligned_cols=77 Identities=29% Similarity=0.489 Sum_probs=63.9
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEEEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCMFLI 481 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv 481 (482)
+|...+.||+|++|.||+|+.. +++.+++|++...... ....+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 3667788999999999999965 6899999998654322 23457899999999999999999999999988 777777
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 80 ~ 80 (260)
T cd06606 80 L 80 (260)
T ss_pred E
Confidence 4
No 320
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.39 E-value=7.4e-09 Score=88.97 Aligned_cols=78 Identities=21% Similarity=0.417 Sum_probs=65.6
Q ss_pred hcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.|+.-+.||+|.|+.||+.. .++|+.+|+|.++..+.. ....++..+|++|...++|||||++...+.+....|||+
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~-~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhc-cccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 456677789999999999887 467999999988643332 235688999999999999999999999999999999985
No 321
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.39 E-value=5.5e-09 Score=102.83 Aligned_cols=172 Identities=25% Similarity=0.308 Sum_probs=74.5
Q ss_pred CccCcCCCCCCEEeCcCCcccccCCccccCC-CCCCEEEcccccCc--------------c--cccCcCEEEcccCeecc
Q 036034 94 PSTFGHLKRLKSLDLSQNKLVGPIPSSLGHL-TQLTTLNMRSNLIN--------------A--SLVNLTSLSLHYNNLTG 156 (482)
Q Consensus 94 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l-~~L~~L~l~~n~i~--------------~--~~~~L~~L~l~~n~~~~ 156 (482)
|-.+..+.+|+.|.|.++.+.. ...+-.+ .+|+.|.. .|.+. . ....|...++++|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 5566677788888888887752 1111111 12222221 11111 0 0123444445555444
Q ss_pred cCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcC
Q 036034 157 PIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMN 236 (482)
Q Consensus 157 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 236 (482)
.+...+.-++.|+.|+|+.|++++. +.+..+++|++|||+.|++....-.....+ .|+.|.+++|.++.. ..+.+
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~tL--~gie~ 252 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTTL--RGIEN 252 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh-hheeeeecccHHHhh--hhHHh
Confidence 2233444445555555555555432 234445555555555555542111111111 255555555544321 12334
Q ss_pred CCCCCEEEcCCCcCcccCC-ccccCccCCCEEeccCCcC
Q 036034 237 CSKLMELELGNNLLRGSIP-SEIGKLQELYYLDLSHNFI 274 (482)
Q Consensus 237 ~~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~n~l 274 (482)
+.+|+.||+++|-+.+.-. ..+..+..|+.|+|.+|++
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 4455555555554432211 1123344445555555544
No 322
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.39 E-value=1.6e-06 Score=79.46 Aligned_cols=77 Identities=27% Similarity=0.518 Sum_probs=64.3
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|++|.||+|+.. +++.+|+|.+...... ....+.+.+|++++++++|||++++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEE
Confidence 3667788999999999999854 5789999999754332 234578999999999999999999999999988888875
No 323
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.39 E-value=1.1e-06 Score=82.20 Aligned_cols=77 Identities=29% Similarity=0.417 Sum_probs=65.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..+.|...+.+|+|+||.||+|... +++.+|+|++..... ..+.+.+|++++++++|+|++++++++...+..|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 4556777888999999999999975 688999999865332 34678999999999999999999999999999988
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 93 v~ 94 (286)
T cd06614 93 VM 94 (286)
T ss_pred EE
Confidence 85
No 324
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.38 E-value=9.8e-07 Score=83.04 Aligned_cols=77 Identities=30% Similarity=0.400 Sum_probs=61.3
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCE-----
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKC----- 477 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~----- 477 (482)
+|+..+.||+|+||.||+|+. .+++.||+|.++..... ....+.+.+|++++++++ ||||+++++++...+.
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 577888999999999999995 46899999988643221 223357888999999995 6999999999987665
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 81 ~~lv~ 85 (295)
T cd07837 81 LYLVF 85 (295)
T ss_pred EEEEe
Confidence 67775
No 325
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.38 E-value=1.4e-07 Score=90.66 Aligned_cols=63 Identities=29% Similarity=0.579 Sum_probs=53.8
Q ss_pred cceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 409 KYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+-+|+|+-|.||.|+++ ++.||||+++..+ ..+|+-+++++||||+.|.|+|....+.+|||
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk----------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiM 191 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK----------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIM 191 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhh----------hhhHHHHHhccCcceeeEeeeecCCceeEEee
Confidence 445999999999999985 6789999875321 24688999999999999999999999999987
No 326
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.38 E-value=9.2e-07 Score=82.37 Aligned_cols=76 Identities=36% Similarity=0.596 Sum_probs=62.6
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC---CCCccceeEEEEeCCEEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR---HRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~l 480 (482)
.|+..+.||+|+||.||+|.. .+++.+|+|.+.... .....+++.+|++++++++ |||+++++++|.+++..++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 366678899999999999995 568999999986432 2233467889999999997 9999999999999988888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 80 v~ 81 (277)
T cd06917 80 IM 81 (277)
T ss_pred EE
Confidence 75
No 327
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.38 E-value=1e-06 Score=83.91 Aligned_cols=69 Identities=28% Similarity=0.467 Sum_probs=54.1
Q ss_pred cceeCccCcEEEEEEEcC---CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCEEEEEC
Q 036034 409 KYCIGTGGYGSVYRARLP---SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH--RKCMFLIY 482 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ 482 (482)
...||+|+||.||+|+.. .+..+|+|.+.... ....+.+|++++++++|||||++++++.. +...++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEE
Confidence 357999999999999954 35789999886432 12467899999999999999999999864 44566664
No 328
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.38 E-value=7.4e-07 Score=84.31 Aligned_cols=78 Identities=23% Similarity=0.440 Sum_probs=62.8
Q ss_pred hhcccccceeCccCcEEEEEEEc--------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL--------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCL 473 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 473 (482)
..+|...+.||+|+||.||+|+. .++..+|+|.+.... .....+++.+|+.++..+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 45688889999999999999973 124578999886422 223346789999999999 8999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
..+..|+||
T Consensus 92 ~~~~~~lv~ 100 (304)
T cd05101 92 QDGPLYVIV 100 (304)
T ss_pred cCCceEEEE
Confidence 998888875
No 329
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.38 E-value=7.6e-07 Score=81.88 Aligned_cols=70 Identities=27% Similarity=0.571 Sum_probs=56.4
Q ss_pred ceeCccCcEEEEEEEcCC--CC--EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLPS--GK--VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~--~~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|++.+ ++ .+|+|.+...... ...+.|.+|++++++++|||||++++++.+ ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEE
Confidence 358999999999998643 33 6899998654332 445789999999999999999999999988 7777764
No 330
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.38 E-value=7.3e-07 Score=82.83 Aligned_cols=78 Identities=31% Similarity=0.589 Sum_probs=63.5
Q ss_pred HHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC--
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRK-- 476 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~-- 476 (482)
.++++|+..+.||+|+||.||+|... +++.+|+|.+..... ..++|.+|++++.++ +||||+++++++.+..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 35678999999999999999999964 578999999864322 236789999999999 6999999999997754
Q ss_pred ----EEEEEC
Q 036034 477 ----CMFLIY 482 (482)
Q Consensus 477 ----~~~lv~ 482 (482)
..++||
T Consensus 79 ~~~~~~~lv~ 88 (275)
T cd06608 79 GNDDQLWLVM 88 (275)
T ss_pred CcceEEEEEE
Confidence 366664
No 331
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.37 E-value=9e-07 Score=81.46 Aligned_cols=70 Identities=24% Similarity=0.467 Sum_probs=54.8
Q ss_pred eeCccCcEEEEEEEc---CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARL---PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~---~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|.+ .++..+|+|+++... .+....++|.+|+.++++++||||++++|++.+ +..++||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 74 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVM 74 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEE
Confidence 589999999999974 357889999986432 233345789999999999999999999999864 4455554
No 332
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.37 E-value=1.2e-06 Score=81.75 Aligned_cols=76 Identities=25% Similarity=0.494 Sum_probs=59.5
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCC----EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGK----VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.+|...+.||+|+||.||+|... +|. .+|+|.+..... ....+++.+|+.++++++||||++++++|.+ +..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 46777889999999999999853 233 589998764432 2344679999999999999999999999987 555
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 84 ~~v~ 87 (279)
T cd05057 84 QLIT 87 (279)
T ss_pred EEEE
Confidence 5553
No 333
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.37 E-value=4.5e-09 Score=92.86 Aligned_cols=170 Identities=21% Similarity=0.230 Sum_probs=119.7
Q ss_pred CCCCEEEcccccCcc--------cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCC--CcCCcCCCCCCE
Q 036034 125 TQLTTLNMRSNLINA--------SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPI--PSSVGHLTQLNT 194 (482)
Q Consensus 125 ~~L~~L~l~~n~i~~--------~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~ 194 (482)
+.|++++|+...|+. .+.+|+.|.+.++++.+.+...+.+..+|+.|+++.+.--... .-.+.+++.|..
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 358888888887763 4778999999999999888888888999999999876421111 123567889999
Q ss_pred EeccCCccccccCccC-c-CCCCCCeeeccCCccc---CCCCccCcCCCCCCEEEcCCCc-CcccCCccccCccCCCEEe
Q 036034 195 LNMYSNQINGSIPLEI-G-NLKRVEAVKLYDNKLD---GPIPPELMNCSKLMELELGNNL-LRGSIPSEIGKLQELYYLD 268 (482)
Q Consensus 195 L~l~~n~l~~~~~~~~-~-~l~~L~~L~l~~n~l~---~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~ 268 (482)
|++++|.+.......+ . --++|+.|+++++.-. ..+..-...+|+|..|||+.|. ++...-..+-+++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 9999997764322111 1 1257888888876421 1222233568999999999874 4433344567889999999
Q ss_pred ccCCcCccccch---hhcCCCCCCEEECCCC
Q 036034 269 LSHNFINGKILS---ELGAIPSIDTVDLSMN 296 (482)
Q Consensus 269 l~~n~l~~~~~~---~~~~~~~L~~l~l~~n 296 (482)
++.|.. .+|. .+...|+|.+||+.++
T Consensus 345 lsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 998874 2333 4577899999998865
No 334
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.37 E-value=8.4e-07 Score=83.62 Aligned_cols=77 Identities=29% Similarity=0.520 Sum_probs=61.0
Q ss_pred hcccccceeCccCcEEEEEEEcCC-CC--EEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS-GK--VVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~-~~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
++|+..+.||+|+||.||+|+..+ +. .+|+|.++... .....+.|.+|++++.++ +||||+++++++.+.+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 467888999999999999998643 33 46888875322 223346799999999999 7999999999999888887
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 80 lv~ 82 (297)
T cd05089 80 IAI 82 (297)
T ss_pred EEE
Confidence 774
No 335
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.36 E-value=9.6e-07 Score=81.57 Aligned_cols=69 Identities=28% Similarity=0.400 Sum_probs=54.7
Q ss_pred eeCccCcEEEEEEEcCC-------------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 411 CIGTGGYGSVYRARLPS-------------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~~-------------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
.||+|+||.||+|++.. ...+|+|.+.... ....+.|.+|+.++..++|||||+++++|.++..
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 58999999999998532 2257888875422 2234678899999999999999999999999888
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 79 ~~lv~ 83 (262)
T cd05077 79 NIMVE 83 (262)
T ss_pred CEEEE
Confidence 88775
No 336
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.36 E-value=1.1e-06 Score=82.20 Aligned_cols=76 Identities=26% Similarity=0.412 Sum_probs=60.6
Q ss_pred cccccceeCccCcEEEEEEEc-----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KC 477 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~ 477 (482)
.|+..+.||+|+||.||.+++ .++..||+|.++... .....+.|.+|++++++++||||+++.+++.+. +.
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 466778899999999999974 347789999986432 223446799999999999999999999999875 45
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 83 ~~lv~ 87 (284)
T cd05079 83 IKLIM 87 (284)
T ss_pred eEEEE
Confidence 66664
No 337
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.36 E-value=1.1e-06 Score=80.64 Aligned_cols=74 Identities=31% Similarity=0.604 Sum_probs=60.8
Q ss_pred cccceeCccCcEEEEEEEcCC-----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 407 HIKYCIGTGGYGSVYRARLPS-----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 407 ~~~~~ig~g~~g~v~~~~~~~-----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
...+.||+|+||.||+++... +..+|+|.+...... ...+.+.+|++++.+++||||+++++++.+.+..++|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 346779999999999999643 378999998644322 2457899999999999999999999999998888887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 80 ~ 80 (258)
T smart00219 80 M 80 (258)
T ss_pred E
Confidence 5
No 338
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.36 E-value=1.2e-06 Score=81.12 Aligned_cols=78 Identities=23% Similarity=0.555 Sum_probs=61.2
Q ss_pred cccccceeCccCcEEEEEEEcCC--CCEEEEEEeccccc-------cchhhHHHHHHHHHHHhc-CCCCCccceeEEEEe
Q 036034 405 DFHIKYCIGTGGYGSVYRARLPS--GKVVALKKLHCSET-------EELTSLESFRNKARLLSQ-IRHRNIVKLYGFCLH 474 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~~--~~~vavK~l~~~~~-------~~~~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~ 474 (482)
+|+..+.||+|+||.||+|+... ++.+|+|.+..... .......++.+|+.++.+ ++||||++++++|.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36777889999999999999654 67899998853221 122234567889988875 799999999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
.+..++||
T Consensus 81 ~~~~~lv~ 88 (269)
T cd08528 81 NDRLYIVM 88 (269)
T ss_pred CCeEEEEE
Confidence 99998885
No 339
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.36 E-value=6.3e-07 Score=87.95 Aligned_cols=74 Identities=23% Similarity=0.521 Sum_probs=61.8
Q ss_pred cccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CC-----CccceeEEEEeCCE
Q 036034 405 DFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HR-----NIVKLYGFCLHRKC 477 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~g~~~~~~~ 477 (482)
.|.+.++||+|+||+|.+++ .++++.||||+++..+. ...+-..|+.++..++ |. |+|++++|+..+++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~----f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR----FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH----HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 78899999999999999999 45699999999964332 2244567899999887 43 89999999999999
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.+||+
T Consensus 263 lciVf 267 (586)
T KOG0667|consen 263 LCIVF 267 (586)
T ss_pred eeeee
Confidence 99985
No 340
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.35 E-value=1e-06 Score=84.72 Aligned_cols=78 Identities=24% Similarity=0.387 Sum_probs=61.8
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK----- 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 476 (482)
.++|...+.||+|+||.||+|+. .+|+.||+|.+.... .......+.+|+.++.+++||||+++++++...+
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46788899999999999999984 468999999985322 1223466889999999999999999999876543
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..|+||
T Consensus 82 ~~~lv~ 87 (336)
T cd07849 82 DVYIVQ 87 (336)
T ss_pred eEEEEe
Confidence 356664
No 341
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.35 E-value=1.3e-06 Score=83.60 Aligned_cols=71 Identities=27% Similarity=0.414 Sum_probs=58.2
Q ss_pred eeCcc--CcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTG--GYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g--~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+| +||+||+++. .+|+.||+|.+...... ....+.+.+|+.+++.++|||||+++++|..++..++||
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~ 78 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVIS 78 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEE
Confidence 46666 9999999995 47999999998654322 234578899999999999999999999999999888875
No 342
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.35 E-value=1.2e-06 Score=85.99 Aligned_cols=71 Identities=18% Similarity=0.292 Sum_probs=59.7
Q ss_pred hcccccceeCccCcEEEEEEEcC---CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP---SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
.+|...+.||+|+||.||++... .++.||+|.+... +.+.+|++++++++|||||++++++...+..++
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 56888999999999999999743 3578999987532 235689999999999999999999999888888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 164 v~ 165 (392)
T PHA03207 164 VM 165 (392)
T ss_pred Ee
Confidence 76
No 343
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.35 E-value=1.1e-06 Score=82.83 Aligned_cols=78 Identities=23% Similarity=0.393 Sum_probs=62.6
Q ss_pred hhcccccceeCccCcEEEEEEEcCC-CCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~l 480 (482)
.++|+..+.||+|+||.||+|+... ++.+|||.++..... ...+++.+|++++.+.. ||||++++++|.++...|+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 3567788999999999999999764 889999998643221 23356777887777775 9999999999999999988
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 92 v~ 93 (296)
T cd06618 92 CM 93 (296)
T ss_pred Ee
Confidence 86
No 344
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.35 E-value=7.2e-07 Score=82.33 Aligned_cols=71 Identities=25% Similarity=0.447 Sum_probs=59.9
Q ss_pred eCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|+||.||+++.. +|+.+|+|.+...........+.+.+|++++.+++||||+++++.+.+++..|+||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 72 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVM 72 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEE
Confidence 689999999999975 48999999986544333345577999999999999999999999999988888875
No 345
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.34 E-value=1.7e-06 Score=80.95 Aligned_cols=75 Identities=27% Similarity=0.427 Sum_probs=58.1
Q ss_pred ccccceeCccCcEEEEEEEc-----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEE
Q 036034 406 FHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCM 478 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~ 478 (482)
|...+.||+|+||+||.+.+ .+++.||+|.++.... ....+.|.+|++++++++||||++++++|... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 36778899999999987653 3577899999864321 22346789999999999999999999998764 346
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 84 ~lv~ 87 (283)
T cd05080 84 QLIM 87 (283)
T ss_pred EEEe
Confidence 6664
No 346
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.34 E-value=8.2e-07 Score=81.02 Aligned_cols=78 Identities=27% Similarity=0.414 Sum_probs=61.2
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe-----CCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH-----RKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-----~~~ 477 (482)
..|...+.||+|+||.|+.++. .+|..||+|++.. ........+.-.+|++++..++|+|||.+.+.+.. -..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~-~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN-PFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhh-hhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 4455567899999999999994 5789999999852 22333455778899999999999999999998865 346
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+|+
T Consensus 101 vYiV~ 105 (359)
T KOG0660|consen 101 VYLVF 105 (359)
T ss_pred eEEeh
Confidence 77774
No 347
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.34 E-value=1.3e-06 Score=82.07 Aligned_cols=76 Identities=30% Similarity=0.596 Sum_probs=62.0
Q ss_pred hcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
.+|...+.||+|+||.||+|+.. ++..+|+|.+.... ....+.|.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 46778889999999999999732 34568899875322 2234679999999999999999999999999998
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 82 ~~lv~ 86 (291)
T cd05094 82 LIMVF 86 (291)
T ss_pred eEEEE
Confidence 88885
No 348
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.34 E-value=1.3e-06 Score=83.93 Aligned_cols=75 Identities=25% Similarity=0.362 Sum_probs=59.3
Q ss_pred ccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchh-----------hHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 408 IKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELT-----------SLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 408 ~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~-----------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
..+.||+|+||.||+|+. .+++.||+|.+......... ....+.+|++++.+++||||+++++++..+
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 456799999999999994 46899999988543221100 012578899999999999999999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..++||
T Consensus 93 ~~~~lv~ 99 (335)
T PTZ00024 93 DFINLVM 99 (335)
T ss_pred CcEEEEE
Confidence 9888875
No 349
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.34 E-value=1.3e-06 Score=80.42 Aligned_cols=71 Identities=31% Similarity=0.646 Sum_probs=59.6
Q ss_pred ceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+... +..+|+|.+....... ..+.+.+|++++.+++|+||+++++++.+.+..++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEE
Confidence 358999999999999643 7889999987543322 4578999999999999999999999999988888875
No 350
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.33 E-value=1.1e-06 Score=81.52 Aligned_cols=69 Identities=32% Similarity=0.488 Sum_probs=55.2
Q ss_pred ccccceeCccCcEEEEEEEcC----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
|...+.||+|+||.||+|.+. .++.+|+|++.... ......+++.+|++++++++||||+++++++...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 73 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRS 73 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 455678999999999999853 36789999986533 2233456789999999999999999999988654
No 351
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.33 E-value=9.4e-07 Score=84.03 Aligned_cols=78 Identities=27% Similarity=0.460 Sum_probs=62.0
Q ss_pred hhcccccceeCccCcEEEEEEEcC--------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCL 473 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 473 (482)
.++|...+.||+|+||.||+|+.. ....+|+|.++.... .....++.+|++++.++ +|||||+++++|.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT--DKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 357888899999999999999731 245689998864322 23346789999999999 6999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
+.+..++||
T Consensus 89 ~~~~~~lv~ 97 (314)
T cd05099 89 QEGPLYVIV 97 (314)
T ss_pred cCCceEEEE
Confidence 888888875
No 352
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.33 E-value=1.4e-06 Score=81.28 Aligned_cols=76 Identities=28% Similarity=0.633 Sum_probs=61.5
Q ss_pred hcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
.++...+.+|+|+||.||+++.. ++..+|+|.+.... ....+.|.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 45677889999999999999732 35678999875422 2345689999999999999999999999998888
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 82 ~~lv~ 86 (280)
T cd05092 82 LLMVF 86 (280)
T ss_pred eEEEE
Confidence 88774
No 353
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.33 E-value=2.3e-06 Score=78.88 Aligned_cols=77 Identities=22% Similarity=0.551 Sum_probs=60.4
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEEEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCMFLI 481 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv 481 (482)
+|+..+.+|.|+||.||++.. .+++.+|+|++..... .....+.+..|++++++++||||+++++++... ...++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 467778899999999999984 4688999999864332 223346789999999999999999999988653 446666
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 80 ~ 80 (265)
T cd08217 80 M 80 (265)
T ss_pred e
Confidence 4
No 354
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.33 E-value=1.6e-06 Score=81.29 Aligned_cols=77 Identities=35% Similarity=0.570 Sum_probs=55.9
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC---CCCCccceeEEEEeC-----
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI---RHRNIVKLYGFCLHR----- 475 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~----- 475 (482)
.|...+.||+|+||.||+|+.. +++.||+|.++.....+ .....+.+|++++.++ +||||+++++++.+.
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 3677888999999999999954 68899999986532222 1224566777777665 799999999988652
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
...++||
T Consensus 80 ~~~~lv~ 86 (288)
T cd07863 80 TKVTLVF 86 (288)
T ss_pred ceEEEEE
Confidence 3355654
No 355
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.33 E-value=1.2e-06 Score=84.14 Aligned_cols=80 Identities=28% Similarity=0.412 Sum_probs=62.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC--E
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRK--C 477 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~--~ 477 (482)
..++|+..+.||+|+||.||+|... +++.+|+|++..... .....+.+.+|+.++.++ +||||++++++|...+ .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 3467888899999999999999964 588999998854221 222345678899999999 9999999999986543 5
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 84 ~~lv~ 88 (337)
T cd07852 84 IYLVF 88 (337)
T ss_pred EEEEe
Confidence 67775
No 356
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.33 E-value=1.1e-06 Score=82.03 Aligned_cols=84 Identities=25% Similarity=0.540 Sum_probs=66.2
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFC 472 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 472 (482)
+..++..+.+.|+..+.+|.|+||.||+|+. .+++.+|+|.+.... ....++..|+.++.++ +||||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 4555666778899999999999999999995 468899999885432 2235688899999999 699999999998
Q ss_pred Ee------CCEEEEEC
Q 036034 473 LH------RKCMFLIY 482 (482)
Q Consensus 473 ~~------~~~~~lv~ 482 (482)
.. .+..|+||
T Consensus 83 ~~~~~~~~~~~~~iv~ 98 (282)
T cd06636 83 IKKSPPGHDDQLWLVM 98 (282)
T ss_pred hcccccCCCCEEEEEE
Confidence 64 34667765
No 357
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.33 E-value=5.7e-07 Score=91.04 Aligned_cols=81 Identities=15% Similarity=0.233 Sum_probs=57.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcCC--CCEEEEEEe--------------ccccccchhhHHHHHHHHHHHhcCCCCCc
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPS--GKVVALKKL--------------HCSETEELTSLESFRNKARLLSQIRHRNI 465 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~--~~~vavK~l--------------~~~~~~~~~~~~~~~~e~~~l~~l~H~ni 465 (482)
..++|...+.||+|+||+||++..+. +...+.|.+ .+...........|.+|++++.+++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35689999999999999999987532 222222211 10001111234568899999999999999
Q ss_pred cceeEEEEeCCEEEEEC
Q 036034 466 VKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 466 v~l~g~~~~~~~~~lv~ 482 (482)
|++++++.+.+..|+|+
T Consensus 226 v~l~~~~~~~~~~~lv~ 242 (501)
T PHA03210 226 LKIEEILRSEANTYMIT 242 (501)
T ss_pred CcEeEEEEECCeeEEEE
Confidence 99999999999888874
No 358
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.32 E-value=1.3e-06 Score=80.95 Aligned_cols=76 Identities=30% Similarity=0.500 Sum_probs=58.4
Q ss_pred hcccccceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
.+|...+.||+|+||.||+|+..+ ...+|+|...... .....+.|.+|+.++.+++||||++++++|.+. ..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-CcE
Confidence 457778899999999999998543 2468999875432 123456899999999999999999999998764 445
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 83 lv~ 85 (270)
T cd05056 83 IVM 85 (270)
T ss_pred EEE
Confidence 553
No 359
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.32 E-value=1.1e-06 Score=82.80 Aligned_cols=74 Identities=26% Similarity=0.377 Sum_probs=60.7
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|.....||+|+||.||+++. .+++.||+|.+..... ...+.+.+|+.++..++||||+++++++..++..|+||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 33345699999999999985 4689999999854322 23467889999999999999999999999999988885
No 360
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.32 E-value=2e-06 Score=83.26 Aligned_cols=80 Identities=25% Similarity=0.335 Sum_probs=62.8
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK---- 476 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 476 (482)
...+|+..+.||+|+||.||+|+. .+++.||+|++.... .+....+.+.+|++++.+++||||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 446788899999999999999994 468999999985432 12233466888999999999999999999886542
Q ss_pred --EEEEEC
Q 036034 477 --CMFLIY 482 (482)
Q Consensus 477 --~~~lv~ 482 (482)
..|+||
T Consensus 93 ~~~~~lv~ 100 (353)
T cd07850 93 FQDVYLVM 100 (353)
T ss_pred cCcEEEEE
Confidence 456664
No 361
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.31 E-value=4.8e-07 Score=87.22 Aligned_cols=81 Identities=22% Similarity=0.317 Sum_probs=62.7
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccc--hh---hHHHHHHHHHHHhcCC---CCCccceeEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEE--LT---SLESFRNKARLLSQIR---HRNIVKLYGFC 472 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~--~~---~~~~~~~e~~~l~~l~---H~niv~l~g~~ 472 (482)
...+|...+.+|+|+||+|+.+..+ +...|.+|.+.+.+.-. +. ....+-.||.||++++ |+||++++.+|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 3456778889999999999999965 45678899886433221 11 1122567999999997 99999999999
Q ss_pred EeCCEEEEEC
Q 036034 473 LHRKCMFLIY 482 (482)
Q Consensus 473 ~~~~~~~lv~ 482 (482)
++.++.||++
T Consensus 639 Eddd~yyl~t 648 (772)
T KOG1152|consen 639 EDDDYYYLET 648 (772)
T ss_pred ecCCeeEEEe
Confidence 9999999975
No 362
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.31 E-value=1.6e-06 Score=83.04 Aligned_cols=71 Identities=23% Similarity=0.300 Sum_probs=55.4
Q ss_pred eCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC---CCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI---RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|+||.||+|+. .+++.||+|++.............+..|..++.+. +||||+++++++.+.+..|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence 69999999999995 46899999998643322223334566677777665 6999999999999999999986
No 363
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.31 E-value=1.1e-06 Score=84.36 Aligned_cols=77 Identities=22% Similarity=0.402 Sum_probs=61.5
Q ss_pred hcccccceeCccCcEEEEEEEcC--------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLH 474 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 474 (482)
.+|...+.||+|+||.||+++.. .+..+|+|.++... .....+++.+|++++.++ +||||++++++|.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 46788899999999999999732 12368999876422 223456899999999999 79999999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
.+..++||
T Consensus 90 ~~~~~lv~ 97 (334)
T cd05100 90 DGPLYVLV 97 (334)
T ss_pred CCceEEEE
Confidence 88888874
No 364
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.31 E-value=1.8e-06 Score=80.20 Aligned_cols=67 Identities=27% Similarity=0.517 Sum_probs=52.8
Q ss_pred cccceeCccCcEEEEEEEcCC-CC--EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 407 HIKYCIGTGGYGSVYRARLPS-GK--VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 407 ~~~~~ig~g~~g~v~~~~~~~-~~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
...+.||+|+||.||+|+... +. .+|+|.++... ......+.|.+|++++++++||||++++++|..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 71 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQ 71 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcc
Confidence 346789999999999999654 33 58999886432 223345789999999999999999999998854
No 365
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.31 E-value=1.9e-06 Score=80.89 Aligned_cols=78 Identities=28% Similarity=0.402 Sum_probs=62.7
Q ss_pred cccccceeCccCcEEEEEEEc----CCCCEEEEEEecccccc-chhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHCSETE-ELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~l~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 478 (482)
+|+..+.||+|+||.||.++. .+|+.||+|++...... .....+.+.+|++++.++ +||||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 366778899999999999984 36889999998643322 223346788999999999 599999999999988888
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 81 ~lv~ 84 (290)
T cd05613 81 HLIL 84 (290)
T ss_pred EEEE
Confidence 8875
No 366
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.30 E-value=5.9e-07 Score=85.64 Aligned_cols=78 Identities=23% Similarity=0.339 Sum_probs=64.0
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE-EEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC-MFLI 481 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~-~~lv 481 (482)
++|...+.+|+|+||.++..+.+ ++..+++|.+.-....+.. .+.-.+|+.++++++|||||.+.+.+.+++. .+||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 46778889999999999888743 5789999999765544433 3467889999999999999999999999888 7887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 83 m 83 (426)
T KOG0589|consen 83 M 83 (426)
T ss_pred E
Confidence 5
No 367
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.30 E-value=7.4e-07 Score=82.61 Aligned_cols=71 Identities=34% Similarity=0.555 Sum_probs=56.9
Q ss_pred ceeCccCcEEEEEEEcCC-------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLPS-------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~-------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|+..+ ++.+|+|.+..... ......|.+|+.++++++||||++++++|.+.+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 358999999999998532 25789998754321 123467999999999999999999999999988888875
No 368
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.29 E-value=1.2e-08 Score=79.74 Aligned_cols=108 Identities=30% Similarity=0.414 Sum_probs=74.4
Q ss_pred CCEEeccCCccccCCCccc---CCCCCCCEEeCcCCcccccCCccccC-CCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 7 LVHLDLSDNYLWGYIPPTL---GRLSKLENLHLSSNSLVGNIPSTLGH-LTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~---~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
+-.+||+.|.+ ..+++.. .....|+.++|++|.+. .+|..|.. .+.+++|++++|+++ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchh-hHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 44577777776 3455443 34456667788888887 55555544 447888888888887 677778888888888
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCc
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPS 119 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 119 (482)
+++.|.+. ..|..+..+.+|..|+..+|.+. ++|.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 88888876 56666777777777877777765 3443
No 369
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.29 E-value=1.6e-06 Score=79.85 Aligned_cols=68 Identities=24% Similarity=0.471 Sum_probs=52.9
Q ss_pred eCccCcEEEEEEEcC---CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARLP---SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|+||.||+|.+. .+..||+|.+.... .....+.|.+|++++.+++||||++++++|.. +..++||
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~ 73 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVM 73 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEE
Confidence 899999999999753 35569999886432 22334679999999999999999999999864 4555654
No 370
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.29 E-value=7.7e-07 Score=87.29 Aligned_cols=79 Identities=18% Similarity=0.378 Sum_probs=66.4
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.+-|+..+.+|.|+-|.|..|+ ..+|+.+|||.+.+...........+.+||.||+-+.|||++++++++.+..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 3457778899999999999999 467999999999765333333345688999999999999999999999999999987
No 371
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.29 E-value=2.2e-06 Score=80.04 Aligned_cols=75 Identities=23% Similarity=0.333 Sum_probs=58.4
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeC--CEEEEE
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHR--KCMFLI 481 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~--~~~~lv 481 (482)
|+..+.+|+|+||.||+|+. .+++.+|+|+++...... ......+|+.++.++. |||++++++++.+. +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL--EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc--hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 45677899999999999994 468899999986432211 1234457899999885 99999999999987 778887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 79 ~ 79 (282)
T cd07831 79 F 79 (282)
T ss_pred E
Confidence 5
No 372
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.29 E-value=1.3e-06 Score=82.77 Aligned_cols=72 Identities=31% Similarity=0.535 Sum_probs=57.6
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
.++|...+.||+|+||.||+|+.. +++.+|+|++......+ .....+.+|++++.+++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVER 79 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecc
Confidence 468999999999999999999954 68899999986433222 1224677899999999999999999987554
No 373
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.28 E-value=3.4e-06 Score=77.07 Aligned_cols=75 Identities=36% Similarity=0.620 Sum_probs=63.5
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|++|.||++... +++.+++|++..... ...+.+.+|++++++++|||++++++++...+..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 4677889999999999999964 688999999865432 34578999999999999999999999999888888774
No 374
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.28 E-value=3e-06 Score=77.89 Aligned_cols=77 Identities=26% Similarity=0.410 Sum_probs=60.5
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-EEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-CMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ 482 (482)
+|+..+.||+|+||.||+++.. +++.+|+|++..... .....+.+.+|++++++++|||++++++.+...+ ..|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 4777889999999999999954 578899999864332 2233467899999999999999999999876544 566765
No 375
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.28 E-value=1.5e-06 Score=87.70 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=60.3
Q ss_pred HHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
....++|...+.||+|+||.||+|+. .+|+.||||++..... .......+.+|+.++..++|+||+++++.+...
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK 103 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence 33456899999999999999999984 5699999999865432 223456788999999999999999988877543
No 376
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.28 E-value=1.6e-06 Score=79.55 Aligned_cols=77 Identities=26% Similarity=0.457 Sum_probs=63.6
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|+..+.||+|+||.||+++. .+++.+|+|.+...... .....++.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEe
Confidence 367788899999999999984 46889999998653322 233467889999999999999999999999988888875
No 377
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.27 E-value=1.3e-06 Score=83.96 Aligned_cols=78 Identities=26% Similarity=0.440 Sum_probs=59.7
Q ss_pred hhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHR 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 475 (482)
.++|...+.||+|+||.||+|+.. .++.||+|+++.... ....+.+.+|++++.++ +||||++++++|...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 346888899999999999999732 357899999864322 22346788899999999 899999999988765
Q ss_pred C-EEEEEC
Q 036034 476 K-CMFLIY 482 (482)
Q Consensus 476 ~-~~~lv~ 482 (482)
+ ..++||
T Consensus 84 ~~~~~~v~ 91 (337)
T cd05054 84 GGPLMVIV 91 (337)
T ss_pred CCCEEEEE
Confidence 3 455543
No 378
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.27 E-value=2.4e-06 Score=78.57 Aligned_cols=70 Identities=27% Similarity=0.444 Sum_probs=54.1
Q ss_pred ceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|++.. +..+|+|.+...... ...+++.+|++++++++|||||++++++... ..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCKGE-PLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC-ceEEEE
Confidence 359999999999998532 268999998654332 3346799999999999999999999988644 455553
No 379
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.27 E-value=3.7e-06 Score=77.15 Aligned_cols=77 Identities=27% Similarity=0.471 Sum_probs=63.9
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+|...+.||+|+||.||++... ++..+|+|++..... .....+.+.+|++++++++|||++++.+.+...+..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEE
Confidence 3677788999999999999954 588999999865432 2234567899999999999999999999999888888875
No 380
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.26 E-value=1.5e-06 Score=79.53 Aligned_cols=71 Identities=28% Similarity=0.403 Sum_probs=60.1
Q ss_pred eCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|+||.||++... +++.+|+|.+.............+..|++++++++||||+++++.+.+++..++||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 72 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVL 72 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEE
Confidence 699999999999964 58899999987554433345568999999999999999999999999999888885
No 381
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.25 E-value=1.9e-06 Score=79.18 Aligned_cols=72 Identities=25% Similarity=0.669 Sum_probs=58.8
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|.. .++.+|+|.++... ..+.|.+|+.++.+++|||++++++++.... .++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEE
Confidence 5688889999999999999975 57889999885432 2367899999999999999999999987654 45553
No 382
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.25 E-value=6.2e-07 Score=86.45 Aligned_cols=77 Identities=23% Similarity=0.384 Sum_probs=64.5
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
...|..-..||+|..|.||.++ ..+++.||||++..... ...+-..+|+.+|+..+|+|||+++..|.-++++++|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 3456667789999999999998 56789999999965332 2235678999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 349 M 349 (550)
T KOG0578|consen 349 M 349 (550)
T ss_pred E
Confidence 7
No 383
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.25 E-value=1.9e-06 Score=79.27 Aligned_cols=67 Identities=30% Similarity=0.558 Sum_probs=52.6
Q ss_pred eeCccCcEEEEEEEcCC-C----------CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 411 CIGTGGYGSVYRARLPS-G----------KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~~-~----------~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
.||+|+||.||+|.... + ..+++|.+..... ..+.|.+|+.++++++||||++++|+|.. +..+
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 58999999999999653 2 2467787653321 14789999999999999999999999987 6666
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 77 lv~ 79 (259)
T cd05037 77 MVE 79 (259)
T ss_pred EEE
Confidence 664
No 384
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.24 E-value=2.5e-06 Score=78.65 Aligned_cols=71 Identities=27% Similarity=0.524 Sum_probs=53.4
Q ss_pred ceeCccCcEEEEEEEcC----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLP----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH-RKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ 482 (482)
+.||+|+||.||+|+.. .+..+|+|++.... .....+.|.+|+.+++.++||||++++++|.. ++..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEE
Confidence 35899999999999853 24578999875321 22345788999999999999999999998865 33455553
No 385
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.24 E-value=1.8e-06 Score=82.93 Aligned_cols=78 Identities=26% Similarity=0.333 Sum_probs=61.5
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH----RKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~ 478 (482)
.+|+..+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|+.++.+++||||+++++++.. ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 6788889999999999999994 4689999999864322 22234678889999999999999999998764 2456
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 84 ~lv~ 87 (334)
T cd07855 84 YVVM 87 (334)
T ss_pred EEEE
Confidence 6664
No 386
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.24 E-value=1.2e-06 Score=81.68 Aligned_cols=76 Identities=32% Similarity=0.534 Sum_probs=62.5
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|+....||+|+||.||+|+.. +++.+|+|.+..... +....+.+..|++++++++|||++++++++.+.+..++||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 77 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVF 77 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEe
Confidence 445677999999999999964 589999999875431 2223467889999999999999999999999998888885
No 387
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.24 E-value=2.4e-06 Score=86.54 Aligned_cols=83 Identities=28% Similarity=0.574 Sum_probs=67.4
Q ss_pred HHHHHHHhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 036034 396 FQDIIEATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCL 473 (482)
Q Consensus 396 ~~~~~~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 473 (482)
++.+...+..|+...+||.|.+|.||+++ .++|+..|+|++..+...+ ++...|.+++... +|||++.++|+|.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d----eEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE----EEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc----HHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 34445566778888999999999999999 5679999999987655443 6677888888876 6999999999987
Q ss_pred e-----CCEEEEEC
Q 036034 474 H-----RKCMFLIY 482 (482)
Q Consensus 474 ~-----~~~~~lv~ 482 (482)
. +|.++|||
T Consensus 87 k~~~~~~DqLWLVM 100 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVM 100 (953)
T ss_pred EecCCCCCeEEEEe
Confidence 6 47889987
No 388
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.24 E-value=3.2e-06 Score=79.48 Aligned_cols=70 Identities=29% Similarity=0.449 Sum_probs=59.0
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..||+|+||.||+|.. .+++.+|+|++.... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 96 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 96 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEE
Confidence 5699999999999986 468999999875322 223467899999999999999999999999999998885
No 389
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.24 E-value=3.6e-06 Score=78.74 Aligned_cols=76 Identities=37% Similarity=0.566 Sum_probs=58.5
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC---CCCCccceeEEEEeCCE----
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI---RHRNIVKLYGFCLHRKC---- 477 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~~---- 477 (482)
|+..+.||+|+||.||+|+.. +++.+|+|++......+ .....+.+|++++.++ +|||++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 456788999999999999975 48999999996433222 2235577788777655 69999999999998776
Q ss_pred -EEEEC
Q 036034 478 -MFLIY 482 (482)
Q Consensus 478 -~~lv~ 482 (482)
.++||
T Consensus 80 ~~~l~~ 85 (287)
T cd07838 80 KLTLVF 85 (287)
T ss_pred eeEEEe
Confidence 77764
No 390
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.24 E-value=4.7e-06 Score=78.03 Aligned_cols=75 Identities=25% Similarity=0.341 Sum_probs=61.1
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.|...+.||+|++|.||++.. .+++.+|+|+++... ....+.+.+|+.++.+++||||+++++++...+..++||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEE
Confidence 344557899999999999984 468899999885322 223466889999999999999999999999888888875
No 391
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.23 E-value=2e-06 Score=80.76 Aligned_cols=74 Identities=26% Similarity=0.360 Sum_probs=60.8
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|.....||+|+||.||++.. .++..+|+|.+.... ....+.+.+|+.++..++||||+++++++...+..|+||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 33445699999999999985 468899999885422 233467899999999999999999999999999998885
No 392
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.23 E-value=3.7e-07 Score=78.93 Aligned_cols=76 Identities=22% Similarity=0.433 Sum_probs=63.4
Q ss_pred hcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----E
Q 036034 404 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-----C 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~ 477 (482)
++|...+.+|+|||+.||.++ ..++..+|+|++.+.. .++.+..++|++..++++|||++++++++..+. +
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 578888999999999999999 7789999999998754 234577889999999999999999998876543 3
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.||++
T Consensus 98 ~yll~ 102 (302)
T KOG2345|consen 98 AYLLL 102 (302)
T ss_pred EEEEe
Confidence 67663
No 393
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.23 E-value=2.2e-06 Score=82.49 Aligned_cols=69 Identities=25% Similarity=0.339 Sum_probs=56.9
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
.+|...+.||+|+||.||+|+. .+|+.||+|.+..... ...+.+.+|++++.+++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~ 74 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPS 74 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhccc
Confidence 5688889999999999999995 4689999999864332 3346788999999999999999999776553
No 394
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.23 E-value=2.1e-06 Score=82.52 Aligned_cols=78 Identities=21% Similarity=0.348 Sum_probs=60.9
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----E
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-----C 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~ 477 (482)
..|...+.||+|+||.||+|+. .+++.||+|.+..... .....+.+.+|+.++..++||||+++++++...+ .
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 4688889999999999999984 4689999999864322 2223456788999999999999999999886542 3
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 84 ~~lv~ 88 (337)
T cd07858 84 VYIVY 88 (337)
T ss_pred EEEEE
Confidence 56664
No 395
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.23 E-value=3.1e-06 Score=80.00 Aligned_cols=72 Identities=25% Similarity=0.508 Sum_probs=55.7
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCC----EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGK----VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
++|+..+.||+|+||.||+|+.. +|. .+|+|.+..... .....+|.+|+.++++++||||++++|+|.+...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASMDHPHLVRLLGVCLSPTI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCc
Confidence 56777888999999999999853 344 478888754322 2233578999999999999999999999976543
No 396
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.22 E-value=7.6e-07 Score=87.70 Aligned_cols=69 Identities=26% Similarity=0.486 Sum_probs=56.2
Q ss_pred eeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+|+||+||-|+. .+...+|||.+..... ...+-..+||++-++++|.|||+++|.|.+.++.-|.|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds---r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFM 651 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS---REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFM 651 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccc---hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEe
Confidence 699999999999994 4466789999964332 23466789999999999999999999999888766654
No 397
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.21 E-value=3.9e-06 Score=77.82 Aligned_cols=70 Identities=30% Similarity=0.598 Sum_probs=55.7
Q ss_pred eeCccCcEEEEEEEcC-CCC--EEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARLP-SGK--VVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~-~~~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|+.. ++. .+|+|.+.... .....+.|.+|++++.++ +||||++++++|...+..++||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 75 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 75 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEE
Confidence 5899999999999964 344 46888875322 223346789999999999 7999999999999988888875
No 398
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.21 E-value=3.8e-06 Score=77.25 Aligned_cols=73 Identities=25% Similarity=0.538 Sum_probs=59.0
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH-RKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ 482 (482)
.+|...+.||+|+||.||+|... |..+|+|..+... ..+.|.+|+.++++++|+|++++++++.. ++..++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 46788899999999999999864 7889999875321 23678999999999999999999998654 45566664
No 399
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.20 E-value=4.5e-06 Score=77.86 Aligned_cols=71 Identities=23% Similarity=0.496 Sum_probs=56.5
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCC----EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGK----VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~----~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
.+|+..+.||+|+||.||+|++ .+++ .||+|.+.... .....+++.+|+.++..++||||++++++|....
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLTST 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Confidence 5678889999999999999984 3444 48999886432 2223467899999999999999999999997654
No 400
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.19 E-value=1.2e-07 Score=82.92 Aligned_cols=243 Identities=20% Similarity=0.239 Sum_probs=151.8
Q ss_pred ccCCCCCCeeecccCcceecc----CccccCCCCCCEEEccCCccc---ccCC-------ccCcCCCCCCEEeCcCCccc
Q 036034 49 LGHLTQLTTLAIASNHINVSI----PLEIGNLNFLQVLDLSGNEIR---GSIP-------STFGHLKRLKSLDLSQNKLV 114 (482)
Q Consensus 49 ~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~L~~n~~~---~~~~-------~~l~~l~~L~~L~L~~n~l~ 114 (482)
+..+..++.++|++|.|.... ...+.+-.+|+..++++--.. ..++ .++.++++|+..+|++|.+.
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 445788999999999997643 344566788888888764221 1222 44567899999999999998
Q ss_pred ccCCcc----ccCCCCCCEEEcccccCcccc-----cCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCC--
Q 036034 115 GPIPSS----LGHLTQLTTLNMRSNLINASL-----VNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIP-- 183 (482)
Q Consensus 115 ~~~~~~----l~~l~~L~~L~l~~n~i~~~~-----~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-- 183 (482)
...|+. ++..+.|++|.|.+|.+...- ..|.+| ..| .....-+.|+......|++.....
T Consensus 106 ~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~l--a~n-------KKaa~kp~Le~vicgrNRlengs~~~ 176 (388)
T COG5238 106 SEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHL--AYN-------KKAADKPKLEVVICGRNRLENGSKEL 176 (388)
T ss_pred cccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHH--HHH-------hhhccCCCceEEEeccchhccCcHHH
Confidence 777765 456788888888888765210 000000 000 111233556777777776642111
Q ss_pred --cCCcCCCCCCEEeccCCccccc-----cCccCcCCCCCCeeeccCCcccCC----CCccCcCCCCCCEEEcCCCcCcc
Q 036034 184 --SSVGHLTQLNTLNMYSNQINGS-----IPLEIGNLKRVEAVKLYDNKLDGP----IPPELMNCSKLMELELGNNLLRG 252 (482)
Q Consensus 184 --~~~~~l~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~~ 252 (482)
..+..-..|+.+.+..|.+... +...+..+.+|+.|++++|-++.. +...+..++.|+.|.+..|-++.
T Consensus 177 ~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~ 256 (388)
T COG5238 177 SAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSN 256 (388)
T ss_pred HHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhcc
Confidence 1122235677777777766422 122334567888888888877643 33456667888899998887765
Q ss_pred cCCccc------cCccCCCEEeccCCcCccccchh-------hcCCCCCCEEECCCCcccc
Q 036034 253 SIPSEI------GKLQELYYLDLSHNFINGKILSE-------LGAIPSIDTVDLSMNNLSG 300 (482)
Q Consensus 253 ~~~~~~------~~~~~L~~L~l~~n~l~~~~~~~-------~~~~~~L~~l~l~~n~l~~ 300 (482)
.....+ ...|+|..|-..+|-..+.+... -..+|-|..+.+.+|.+..
T Consensus 257 ~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 257 EGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred ccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchh
Confidence 433222 23578888888888766543221 2356777788888888763
No 401
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.19 E-value=4.9e-06 Score=77.64 Aligned_cols=71 Identities=20% Similarity=0.389 Sum_probs=53.8
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCC----EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGK----VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
.+|...+.||+|+||.||+|.+. +++ .+|+|.+... ......+++..|+.++++++|||||+++|++.+..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGAS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCc
Confidence 46777889999999999999853 454 4677776432 12233467888999999999999999999986544
No 402
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.18 E-value=2.6e-06 Score=81.56 Aligned_cols=77 Identities=26% Similarity=0.446 Sum_probs=62.5
Q ss_pred cccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----EE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-----CM 478 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~ 478 (482)
+|...+.||+|+||.||+|+.. .++.+|+|++.... ......+.+.+|++++..++||||+++.+++...+ ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 3677889999999999999964 48899999986432 12234467999999999999999999999998875 67
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 80 ~lv~ 83 (330)
T cd07834 80 YIVT 83 (330)
T ss_pred EEEe
Confidence 7775
No 403
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.18 E-value=6.5e-08 Score=75.73 Aligned_cols=111 Identities=23% Similarity=0.278 Sum_probs=84.1
Q ss_pred CCCCCCCEEeccCCccccCCCccc-CCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCC
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTL-GRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQ 80 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 80 (482)
.+..+|+.++|++|.+.+ .|+.| ..++.++.|+|++|.++ .+|..+..++.|+.|+++.|.+. ..|..+..|.+|-
T Consensus 50 ~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~ 126 (177)
T KOG4579|consen 50 SKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLD 126 (177)
T ss_pred hCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHH
Confidence 355678899999999964 55555 45679999999999999 78888999999999999999998 6788888899999
Q ss_pred EEEccCCcccccCCccCcCCCCCCEEeCcCCccccc
Q 036034 81 VLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGP 116 (482)
Q Consensus 81 ~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 116 (482)
.|+..+|.+. ++|-.+-.-+..-...+.++.+.+.
T Consensus 127 ~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~ 161 (177)
T KOG4579|consen 127 MLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDE 161 (177)
T ss_pred HhcCCCCccc-cCcHHHhccccHHHHHhcCCccccc
Confidence 9999999886 4444332222222333455555543
No 404
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.17 E-value=2.9e-06 Score=86.09 Aligned_cols=64 Identities=23% Similarity=0.462 Sum_probs=54.3
Q ss_pred hcccccceeCccCcEEEEEEEcCCC-CEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSG-KVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYG 470 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~-~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g 470 (482)
-.+++.+.|.+|||+.||.++...+ ..+|+|++-.. +....+...+||++|+.+. |||||.+++
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yid 102 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYID 102 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEec
Confidence 3466788899999999999996554 99999998542 4556688999999999997 999999999
No 405
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.17 E-value=3.9e-06 Score=78.63 Aligned_cols=78 Identities=27% Similarity=0.398 Sum_probs=62.2
Q ss_pred cccccceeCccCcEEEEEEEc----CCCCEEEEEEecccccc-chhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHCSETE-ELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~l~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 478 (482)
+|+..+.||+|+||.||+++. .+++.+|||.++..... .....+.+.+|++++.++ +||||+++++.+...+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 366778899999999999873 35788999998643222 223346788999999999 599999999999988888
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 81 ~lv~ 84 (288)
T cd05583 81 HLIL 84 (288)
T ss_pred EEEE
Confidence 8885
No 406
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.15 E-value=1.5e-06 Score=80.03 Aligned_cols=69 Identities=26% Similarity=0.444 Sum_probs=54.8
Q ss_pred eeCccCcEEEEEEEcCC--------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARLPS--------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~~--------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|.... ...+|+|.+.... ....+.|.+|+.++..++|||||++++++..++..++||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 58999999999998532 2347888774322 233467899999999999999999999999988888875
No 407
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.15 E-value=1.5e-06 Score=83.52 Aligned_cols=78 Identities=24% Similarity=0.548 Sum_probs=67.2
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 482 (482)
..|+..+.||+||.++||++.-.+.+.+|.|++... ..+.+....|.+|++.+.+++ |.+||++++|-..++.+||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 457778889999999999999888888998877532 234556788999999999995 999999999999999999997
No 408
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.14 E-value=2.5e-06 Score=79.64 Aligned_cols=75 Identities=27% Similarity=0.417 Sum_probs=60.0
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||+|+||.||+|+.. +++.+|+|++...... .......+|+..+.+++ ||||+++++++.+++..++||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 77 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVF 77 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEE
Confidence 456778999999999999975 4788999998643221 12234567999999999 999999999999998888886
No 409
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.14 E-value=2.5e-06 Score=82.18 Aligned_cols=80 Identities=24% Similarity=0.378 Sum_probs=62.9
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE---
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC--- 477 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~--- 477 (482)
..++|.....||+|+||.||+|+.. +++.||+|++..... .....+.+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3567888999999999999999964 588999999864321 22334667889999999999999999998776654
Q ss_pred ---EEEEC
Q 036034 478 ---MFLIY 482 (482)
Q Consensus 478 ---~~lv~ 482 (482)
.++|+
T Consensus 92 ~~~~~lv~ 99 (343)
T cd07851 92 FQDVYLVT 99 (343)
T ss_pred cccEEEEE
Confidence 66664
No 410
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.13 E-value=9e-06 Score=72.85 Aligned_cols=75 Identities=36% Similarity=0.637 Sum_probs=62.0
Q ss_pred ccccceeCccCcEEEEEEEcCC-CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||+|++|.||+|+... ++.+|+|.+...... ...+.+.+|++.+.+++|+|++++++++...+..++|+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 76 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVM 76 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEE
Confidence 4456789999999999999754 889999998653322 24578999999999999999999999999888877764
No 411
>PTZ00284 protein kinase; Provisional
Probab=98.13 E-value=3.8e-06 Score=84.56 Aligned_cols=80 Identities=18% Similarity=0.286 Sum_probs=57.9
Q ss_pred HHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCC------CccceeEE
Q 036034 399 IIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHR------NIVKLYGF 471 (482)
Q Consensus 399 ~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~------niv~l~g~ 471 (482)
+....++|...+.||+|+||+||+|+. ..++.||||+++... ....++..|++++.+++|. ++++++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 344567899999999999999999985 458889999985321 1224456677777766554 58889898
Q ss_pred EEeC-CEEEEEC
Q 036034 472 CLHR-KCMFLIY 482 (482)
Q Consensus 472 ~~~~-~~~~lv~ 482 (482)
+... +..++||
T Consensus 200 ~~~~~~~~~iv~ 211 (467)
T PTZ00284 200 FQNETGHMCIVM 211 (467)
T ss_pred EEcCCceEEEEE
Confidence 8765 4566664
No 412
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.12 E-value=4.4e-06 Score=77.94 Aligned_cols=76 Identities=30% Similarity=0.517 Sum_probs=62.1
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||+|++|.||+|... +++.+|+|++...... ......+.+|++++++++||||+++++++.+++..++||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 77 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVF 77 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEE
Confidence 445678999999999999954 6889999998643322 233467889999999999999999999999988888875
No 413
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.12 E-value=8.8e-06 Score=74.94 Aligned_cols=73 Identities=23% Similarity=0.368 Sum_probs=54.0
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHH-hcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLL-SQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|.. .+|+.||+|.+.............+..|..++ ...+|||++++++++.+++..|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEE
Confidence 3589999999999985 45889999998643322222233455555444 4558999999999999999888875
No 414
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.08 E-value=2.9e-06 Score=78.17 Aligned_cols=77 Identities=25% Similarity=0.345 Sum_probs=57.3
Q ss_pred ccccceeCccCcEEEEEEEcC-CCCEEEEEEecccccc--chhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETE--ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|...+.||+|+||.||+++.. .+..+++|.++..... ......++.+|+.++.+++||||+++++++.+.+..++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 667788999999999999853 3444566655432211 1123346778999999999999999999999888888775
No 415
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.07 E-value=1.1e-06 Score=75.04 Aligned_cols=68 Identities=21% Similarity=0.429 Sum_probs=58.2
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRK 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~ 476 (482)
.++|+..+.+|+|.|+.|+.|. ..+.+.++||.+++.+ .+...+|++|+..++ |||||++++...++.
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~ 106 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPE 106 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCcc
Confidence 4578888999999999999998 5678899999997543 267889999999997 999999999887654
No 416
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.06 E-value=1.4e-05 Score=74.63 Aligned_cols=72 Identities=26% Similarity=0.255 Sum_probs=52.3
Q ss_pred eeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHH---HHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKAR---LLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~---~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||++.. .+++.+|+|.+.............+.+|.. ++...+||||+.+++++.+.+..++||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 76 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFIL 76 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEE
Confidence 489999999999995 458999999886543322222233444443 344457999999999999988888875
No 417
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.06 E-value=1.1e-06 Score=76.72 Aligned_cols=71 Identities=24% Similarity=0.383 Sum_probs=56.3
Q ss_pred ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHh-cCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLS-QIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
..||.|.||+|+|-.. +.|+..|||++..... .+..+++..|.+... .-+-||||+++|.+..++..+|.|
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCM 142 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICM 142 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeH
Confidence 4499999999999884 5799999999975433 345577888886554 447999999999998888777765
No 418
>PRK10345 hypothetical protein; Provisional
Probab=98.03 E-value=1.8e-05 Score=69.67 Aligned_cols=64 Identities=16% Similarity=0.229 Sum_probs=48.9
Q ss_pred cccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-----CCCCccceeEEEEeCC
Q 036034 407 HIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-----RHRNIVKLYGFCLHRK 476 (482)
Q Consensus 407 ~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-----~H~niv~l~g~~~~~~ 476 (482)
.....||+|+||.||. .+ ++.. +||++..... ...+.+.+|++++.++ +||||++++|++.+..
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~ 74 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC 74 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC
Confidence 3457799999999996 43 3443 7888754322 2346799999999999 6799999999998863
No 419
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.00 E-value=7e-07 Score=87.57 Aligned_cols=78 Identities=28% Similarity=0.589 Sum_probs=64.1
Q ss_pred HhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
...+|.....+|.|+||.|||++ ...+...|+|.++-....+ .+-..+|+-++..++|||||.++|-|...+..++
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 45678888999999999999999 4568899999997544333 2445689999999999999999999988888777
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
+|
T Consensus 90 cM 91 (829)
T KOG0576|consen 90 CM 91 (829)
T ss_pred EE
Confidence 65
No 420
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=97.99 E-value=2e-05 Score=73.50 Aligned_cols=72 Identities=26% Similarity=0.256 Sum_probs=52.6
Q ss_pred eeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHH---HHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKA---RLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~---~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+++. .+++.||+|.+.............+..|. +++...+||+|+++.+++.+.+..++||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 76 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 76 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEE
Confidence 389999999999985 45889999998653322222222344443 4455568999999999999999988885
No 421
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.98 E-value=4.6e-06 Score=52.80 Aligned_cols=16 Identities=50% Similarity=0.719 Sum_probs=6.0
Q ss_pred cCCCCCCCEEeCcCCc
Q 036034 25 LGRLSKLENLHLSSNS 40 (482)
Q Consensus 25 ~~~l~~L~~L~L~~n~ 40 (482)
++.|++|++|++++|+
T Consensus 20 l~~l~~L~~L~l~~N~ 35 (44)
T PF12799_consen 20 LSNLPNLETLNLSNNP 35 (44)
T ss_dssp GTTCTTSSEEEETSSC
T ss_pred HhCCCCCCEEEecCCC
Confidence 3333333333333333
No 422
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.98 E-value=3.4e-06 Score=75.89 Aligned_cols=80 Identities=23% Similarity=0.307 Sum_probs=66.9
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
-++|+..+++|+|.||+|..++ ...++.+|+|++++........+..-..|-+++...+||.+..+.-.+...+.++.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 3578888999999999999998 456999999999876555555556677889999999999999998888888888887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 247 M 247 (516)
T KOG0690|consen 247 M 247 (516)
T ss_pred E
Confidence 6
No 423
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=97.98 E-value=9.8e-06 Score=80.91 Aligned_cols=81 Identities=19% Similarity=0.390 Sum_probs=54.9
Q ss_pred HhhcccccceeCccCcEEEEEEEc-----------------CCCCEEEEEEeccccccch-----------hhHHHHHHH
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-----------------PSGKVVALKKLHCSETEEL-----------TSLESFRNK 453 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-----------------~~~~~vavK~l~~~~~~~~-----------~~~~~~~~e 453 (482)
..++|...+.||+|+||.||+|.. ..++.||||++........ ...+.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356899999999999999999963 2356899999864321110 011234457
Q ss_pred HHHHhcCCCCCc-----cceeEEEEe--------CCEEEEEC
Q 036034 454 ARLLSQIRHRNI-----VKLYGFCLH--------RKCMFLIY 482 (482)
Q Consensus 454 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lv~ 482 (482)
+.++.+++|.++ ++++|+|.. ++..+|||
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~ 264 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVW 264 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEE
Confidence 777888877655 677888754 34567775
No 424
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.98 E-value=5.7e-06 Score=52.37 Aligned_cols=12 Identities=50% Similarity=0.620 Sum_probs=4.2
Q ss_pred CCCCCEEEccCC
Q 036034 76 LNFLQVLDLSGN 87 (482)
Q Consensus 76 l~~L~~L~L~~n 87 (482)
|++|++|++++|
T Consensus 23 l~~L~~L~l~~N 34 (44)
T PF12799_consen 23 LPNLETLNLSNN 34 (44)
T ss_dssp CTTSSEEEETSS
T ss_pred CCCCCEEEecCC
Confidence 333333333333
No 425
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.98 E-value=8.7e-06 Score=84.06 Aligned_cols=78 Identities=26% Similarity=0.480 Sum_probs=61.5
Q ss_pred HhhcccccceeCccCcEEEEEEEcC----C----CCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP----S----GKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFC 472 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~----~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 472 (482)
..++....+.+|+|.||.|++|... . ...||||.++..... .+.+++..|+++|..+ +|||||.++|+|
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 3344445568999999999999832 1 356899999754433 4568899999999999 599999999999
Q ss_pred EeCCEEEEE
Q 036034 473 LHRKCMFLI 481 (482)
Q Consensus 473 ~~~~~~~lv 481 (482)
.++++.++|
T Consensus 372 t~~~~~~~v 380 (609)
T KOG0200|consen 372 TQDGPLYVI 380 (609)
T ss_pred ccCCceEEE
Confidence 998887776
No 426
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.97 E-value=7.6e-07 Score=86.78 Aligned_cols=74 Identities=23% Similarity=0.377 Sum_probs=56.0
Q ss_pred cccccceeCccCcEEEEEEEcCC-CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.|.+.-.+|.|.||+||++.-+. +...|-|++... .....++|.-||+|++.++||+||++++.|.-...++|.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEE
Confidence 34445568999999999998543 445577888542 234568899999999999999999999977666665553
No 427
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=97.96 E-value=1.6e-05 Score=75.53 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=55.7
Q ss_pred cceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 409 KYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+.+|.|+++.||+++. +++.+|+|++.... ......+.+.+|++++++++||||+++++++.+.+..+++|
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 78 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVS 78 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEE
Confidence 34455566666666655 68999999986542 22234578999999999999999999999999998888875
No 428
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=97.95 E-value=2.7e-05 Score=74.64 Aligned_cols=69 Identities=26% Similarity=0.386 Sum_probs=53.5
Q ss_pred cccccceeCccCcEEEEEEEcC-C--CCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-S--GKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLH 474 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~--~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 474 (482)
+|...+.||+|+||.||+++.. . +..+|+|++..... .....+.+.+|++++.++ +|||||++++++..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 73 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIV 73 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeee
Confidence 3667788999999999999953 3 77899999864221 222346788999999999 59999999987643
No 429
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.95 E-value=3.2e-05 Score=73.71 Aligned_cols=15 Identities=7% Similarity=0.011 Sum_probs=7.5
Q ss_pred CCCCCEEeCcCCccc
Q 036034 28 LSKLENLHLSSNSLV 42 (482)
Q Consensus 28 l~~L~~L~L~~n~l~ 42 (482)
+.+++.|++++|.++
T Consensus 51 ~~~l~~L~Is~c~L~ 65 (426)
T PRK15386 51 ARASGRLYIKDCDIE 65 (426)
T ss_pred hcCCCEEEeCCCCCc
Confidence 445555555555444
No 430
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.94 E-value=3.7e-05 Score=73.32 Aligned_cols=54 Identities=19% Similarity=0.272 Sum_probs=25.2
Q ss_pred CCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCC
Q 036034 52 LTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQN 111 (482)
Q Consensus 52 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n 111 (482)
+.+++.|++++|.++ .+|. + ..+|++|.+++|.-...+|+.+ .++|++|++++|
T Consensus 51 ~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 51 ARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred hcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 455666666666554 3341 1 1245556555543222344332 134555555554
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.92 E-value=1.4e-05 Score=69.56 Aligned_cols=60 Identities=23% Similarity=0.181 Sum_probs=42.8
Q ss_pred cceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhh-----------------------HHHHHHHHHHHhcCCCCCc
Q 036034 409 KYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTS-----------------------LESFRNKARLLSQIRHRNI 465 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~-----------------------~~~~~~e~~~l~~l~H~ni 465 (482)
...||+|+||.||+|+.++|+.||||+++......... .....+|++++.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 35699999999999998789999999996542211000 0122459999999988876
Q ss_pred cce
Q 036034 466 VKL 468 (482)
Q Consensus 466 v~l 468 (482)
...
T Consensus 82 ~~p 84 (190)
T cd05147 82 PCP 84 (190)
T ss_pred CCC
Confidence 443
No 432
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.92 E-value=2.3e-05 Score=66.02 Aligned_cols=83 Identities=23% Similarity=0.248 Sum_probs=44.4
Q ss_pred CCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccC-CccccCCCCCCEEEc
Q 036034 54 QLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPI-PSSLGHLTQLTTLNM 132 (482)
Q Consensus 54 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~l 132 (482)
+...+||++|++. . ...|..++.|.+|.|.+|+|+.+-|.--..+++|..|.|.+|.+.... -..+..++.|++|.+
T Consensus 43 ~~d~iDLtdNdl~-~-l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLR-K-LDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchh-h-cccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 4555666666654 1 234555666666666666666444443334555666666666554210 123455566666666
Q ss_pred ccccCc
Q 036034 133 RSNLIN 138 (482)
Q Consensus 133 ~~n~i~ 138 (482)
-+|+++
T Consensus 121 l~Npv~ 126 (233)
T KOG1644|consen 121 LGNPVE 126 (233)
T ss_pred cCCchh
Confidence 555554
No 433
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=97.90 E-value=1.7e-06 Score=89.92 Aligned_cols=86 Identities=26% Similarity=0.334 Sum_probs=74.7
Q ss_pred HHHHHHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 397 QDIIEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 397 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
.++.-..++|.+.++||+|+||.|..++.+ .++.+|.|++.++..........|..|-.+|.--+.+.||+++-.|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 444555689999999999999999999964 5888999999877666555667899999999999999999999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
.++|+||
T Consensus 148 ~~LYlVM 154 (1317)
T KOG0612|consen 148 RYLYLVM 154 (1317)
T ss_pred cceEEEE
Confidence 9999997
No 434
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=97.89 E-value=3.5e-06 Score=79.16 Aligned_cols=80 Identities=23% Similarity=0.357 Sum_probs=66.0
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
-+.|...++||+|+||.||-++.+ +|+++|.|.+.+......+....-..|-.|+.++..|.||.+--.|.+++.+++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 356777899999999999999854 5999999998654443334445567899999999999999999999999999888
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
+
T Consensus 264 L 264 (591)
T KOG0986|consen 264 L 264 (591)
T ss_pred E
Confidence 5
No 435
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.89 E-value=3.1e-05 Score=65.22 Aligned_cols=123 Identities=27% Similarity=0.253 Sum_probs=88.3
Q ss_pred CEEeccCCccccCCCcccCC-CCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 8 VHLDLSDNYLWGYIPPTLGR-LSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
+.++|++.++... ..++. ..+...+||++|.+... ..|.+++.|.+|.+.+|.|+...|..-.-+++|+.|.|.+
T Consensus 22 ~e~~LR~lkip~i--enlg~~~d~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~Ltn 97 (233)
T KOG1644|consen 22 RELDLRGLKIPVI--ENLGATLDQFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTN 97 (233)
T ss_pred cccccccccccch--hhccccccccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecC
Confidence 5677777766422 11322 35778999999988733 4578899999999999999976665556678899999999
Q ss_pred Cccccc-CCccCcCCCCCCEEeCcCCcccccCC---ccccCCCCCCEEEccc
Q 036034 87 NEIRGS-IPSTFGHLKRLKSLDLSQNKLVGPIP---SSLGHLTQLTTLNMRS 134 (482)
Q Consensus 87 n~~~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~l~~ 134 (482)
|.+... --+.+..+++|++|.+-+|++...-- -.+..+++|+.||...
T Consensus 98 Nsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 98 NSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred cchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 988632 12346788999999999998863211 1355677777776543
No 436
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.84 E-value=2.7e-06 Score=89.73 Aligned_cols=78 Identities=26% Similarity=0.573 Sum_probs=63.3
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
+-++....+||.|.||+||.|. ..+|...|+|.+...... .+..+...+|+.++..++|||+|+++|+-..++..+|.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 4456667899999999999999 667999999988654433 44557788999999999999999999998877766553
No 437
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=97.80 E-value=8.9e-05 Score=65.32 Aligned_cols=69 Identities=36% Similarity=0.667 Sum_probs=57.3
Q ss_pred eCccCcEEEEEEEcCC-CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRARLPS-GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
||+|.+|.||+++... ++.+++|+........ ..+.+.+|++.+.+++|++++++++++......++||
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~ 70 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVM 70 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEE
Confidence 6899999999999754 8899999986533221 3467999999999999999999999999888887774
No 438
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.79 E-value=9.7e-05 Score=68.35 Aligned_cols=79 Identities=18% Similarity=0.264 Sum_probs=55.6
Q ss_pred HHHHHHHhhccccccee--CccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEE
Q 036034 396 FQDIIEATEDFHIKYCI--GTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGF 471 (482)
Q Consensus 396 ~~~~~~~~~~~~~~~~i--g~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~ 471 (482)
..+.....++|+..+.+ |+|+||.||+++. .+++.+|+|......... . |+.....+ +||||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~--e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------I--EPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------h--hHHHHHHhhcCCCEEEEEEE
Confidence 34445555667666666 9999999999984 468889999885432111 1 22222212 69999999999
Q ss_pred EEeCCEEEEEC
Q 036034 472 CLHRKCMFLIY 482 (482)
Q Consensus 472 ~~~~~~~~lv~ 482 (482)
+...+..|+||
T Consensus 78 ~~~~~~~~iv~ 88 (267)
T PHA03390 78 VTTLKGHVLIM 88 (267)
T ss_pred EecCCeeEEEE
Confidence 99999998885
No 439
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=97.77 E-value=6e-05 Score=66.78 Aligned_cols=84 Identities=14% Similarity=0.106 Sum_probs=62.0
Q ss_pred CCcccHHHHHH--HhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHH------HHHHHHHHhcCCC
Q 036034 391 DGRITFQDIIE--ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLES------FRNKARLLSQIRH 462 (482)
Q Consensus 391 ~~~~~~~~~~~--~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~------~~~e~~~l~~l~H 462 (482)
.....+-++.. ..++|...+.+|.|+||.||.... +++.+|+|.+.......+...+. |.+|++.+.+++|
T Consensus 16 ~~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~ 94 (232)
T PRK10359 16 DNDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRS 94 (232)
T ss_pred CCcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 33334444433 346788999999999999999766 57789999996544333333233 6899999999999
Q ss_pred CCccceeEEEEeC
Q 036034 463 RNIVKLYGFCLHR 475 (482)
Q Consensus 463 ~niv~l~g~~~~~ 475 (482)
|+|.....++...
T Consensus 95 ~GI~~~~d~~~~~ 107 (232)
T PRK10359 95 EGLASLNDFYLLA 107 (232)
T ss_pred CCCCcceEeeeec
Confidence 9999998886643
No 440
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.74 E-value=1.3e-05 Score=78.45 Aligned_cols=75 Identities=23% Similarity=0.393 Sum_probs=55.2
Q ss_pred cccceeCccCcEEEEEEEcC-CCCEEEEEEecc-ccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 407 HIKYCIGTGGYGSVYRARLP-SGKVVALKKLHC-SETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 407 ~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~-~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
....+||+|+|-+||||... .|..||=-.++. +..+.....+.|..|+++++.++|||||+++.++.+.+...++
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in 119 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTIN 119 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceee
Confidence 34567999999999999843 477776322211 1223344568899999999999999999999999887665544
No 441
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.71 E-value=0.00012 Score=59.22 Aligned_cols=105 Identities=16% Similarity=0.254 Sum_probs=36.0
Q ss_pred ccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCC
Q 036034 24 TLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRL 103 (482)
Q Consensus 24 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L 103 (482)
.|.++++|+.+.+.. .+.......|.++++|+.+.+..+ +......+|.+++.|+.+.+.. .+.......|..+++|
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 344444455554443 233333344444444555554443 3323333444444455555533 2222223334444555
Q ss_pred CEEeCcCCcccccCCccccCCCCCCEEEcc
Q 036034 104 KSLDLSQNKLVGPIPSSLGHLTQLTTLNMR 133 (482)
Q Consensus 104 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 133 (482)
+.+.+..+ +.......|.++ +|+.+.+.
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 55554433 222233334443 44444443
No 442
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.71 E-value=0.00011 Score=64.19 Aligned_cols=71 Identities=23% Similarity=0.244 Sum_probs=48.9
Q ss_pred ceeCccCcEEEEEEEcCCCCEEEEEEeccccccch---------------------h--hHHHHHHHHHHHhcCCCCCcc
Q 036034 410 YCIGTGGYGSVYRARLPSGKVVALKKLHCSETEEL---------------------T--SLESFRNKARLLSQIRHRNIV 466 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~---------------------~--~~~~~~~e~~~l~~l~H~niv 466 (482)
..||+|+||+||+|+..+|+.||||+++....... . ....+..|.+.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 56999999999999977899999999875421100 0 012346899999999999886
Q ss_pred ceeEEEEeCCEEEEEC
Q 036034 467 KLYGFCLHRKCMFLIY 482 (482)
Q Consensus 467 ~l~g~~~~~~~~~lv~ 482 (482)
....+.... .||||
T Consensus 83 ~p~~~~~~~--~~lVm 96 (190)
T cd05145 83 VPEPILLKK--NVLVM 96 (190)
T ss_pred CceEEEecC--CEEEE
Confidence 544443332 24554
No 443
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=97.64 E-value=5.8e-05 Score=69.91 Aligned_cols=78 Identities=15% Similarity=0.304 Sum_probs=57.4
Q ss_pred HHHHHHhhcccccceeCccCcEEEEEEEcCC------CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeE
Q 036034 397 QDIIEATEDFHIKYCIGTGGYGSVYRARLPS------GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYG 470 (482)
Q Consensus 397 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~------~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g 470 (482)
+++.....++.....+.+|+||+||+|.|.+ .+.|-||.++...++ -+...|.+|.-.+..+.|||+.++.|
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~--iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQ--IQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccH--HHHHHHHHHHHHHhcCcCCCccceeE
Confidence 3444445567777789999999999997643 334567766543322 24567899999999999999999999
Q ss_pred EEEeCC
Q 036034 471 FCLHRK 476 (482)
Q Consensus 471 ~~~~~~ 476 (482)
++.+..
T Consensus 355 V~ie~~ 360 (563)
T KOG1024|consen 355 VSIEDY 360 (563)
T ss_pred EEeecc
Confidence 998753
No 444
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.60 E-value=1.3e-05 Score=82.78 Aligned_cols=108 Identities=28% Similarity=0.373 Sum_probs=63.7
Q ss_pred CCCCEEeccCCccccC-CCccc-CCCCCCCEEeCcCCcccc-cCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 5 RNLVHLDLSDNYLWGY-IPPTL-GRLSKLENLHLSSNSLVG-NIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~-~~~~~-~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
.+|++||+++...... =|..+ .-+|.|+.|.+++-.+.. .+...+.++|+|..||+++++++.. ..++.|++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 3577777777543211 11112 236777777777755432 2334456677777777777777632 56677777777
Q ss_pred EEccCCcccc-cCCccCcCCCCCCEEeCcCCccc
Q 036034 82 LDLSGNEIRG-SIPSTFGHLKRLKSLDLSQNKLV 114 (482)
Q Consensus 82 L~L~~n~~~~-~~~~~l~~l~~L~~L~L~~n~l~ 114 (482)
|.+.+-.+.. ..-..+.++++|+.||+|.....
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~ 233 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNN 233 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccc
Confidence 7776655542 12234566777777777765543
No 445
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=97.60 E-value=0.00015 Score=65.66 Aligned_cols=65 Identities=29% Similarity=0.532 Sum_probs=54.0
Q ss_pred CcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 416 GYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 416 ~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+||.||+|+.. +++.+|+|++........ .+.|.+|++.+++++|+|++++++++...+..++||
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 66 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVM 66 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEE
Confidence 58999999975 489999999865432221 578999999999999999999999999988888775
No 446
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.59 E-value=2e-05 Score=81.55 Aligned_cols=127 Identities=24% Similarity=0.322 Sum_probs=86.1
Q ss_pred CCCCeeecccCccee-ccCccccC-CCCCCEEEccCCcccc-cCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCE
Q 036034 53 TQLTTLAIASNHINV-SIPLEIGN-LNFLQVLDLSGNEIRG-SIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTT 129 (482)
Q Consensus 53 ~~L~~L~l~~n~l~~-~~~~~~~~-l~~L~~L~L~~n~~~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 129 (482)
.+|++|++++...-. ..|..++. +|+|+.|.+.+-.+.. ..-.-..++++|..||+++++++.. ..++++++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 568888888765432 23444433 6888888888766532 2223345678888888888888743 67788888888
Q ss_pred EEcccccCcc--------cccCcCEEEcccCeeccc------CCccCcCCCCCCEEEccCCccccC
Q 036034 130 LNMRSNLINA--------SLVNLTSLSLHYNNLTGP------IPSTLGHLNRIRILDLSENKLVGP 181 (482)
Q Consensus 130 L~l~~n~i~~--------~~~~L~~L~l~~n~~~~~------~~~~~~~l~~L~~L~l~~n~l~~~ 181 (482)
|.+++-.++. .+.+|+.||+|....... .-+.-..+++|+.||.+++.+.+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 8888777664 267888888887664421 112334588999999998877643
No 447
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.57 E-value=1.3e-06 Score=75.79 Aligned_cols=70 Identities=30% Similarity=0.494 Sum_probs=52.3
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
+.|.....||+|.||.||+|+-+ .|+.||+|++-...... +.-..-.+|++++..++|+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe-GfpitalreikiL~~lkHenv~nliEic~t 87 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRT 87 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc-CCcHHHHHHHHHHHHhcchhHHHHHHHHhh
Confidence 45666778999999999999954 57889988663322222 122345789999999999999999988865
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=97.57 E-value=0.00016 Score=64.21 Aligned_cols=72 Identities=15% Similarity=0.178 Sum_probs=54.1
Q ss_pred ceeCccCcEEEEEEEcCCCCEEEEEEeccccccc-----hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLPSGKVVALKKLHCSETEE-----LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~-----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|++|.||+|.. .|..+++|......... ......+.+|++++..++|++++....++.+.+..++||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 4689999999999987 67789999765322211 112346889999999999999988777777777777764
No 449
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=97.52 E-value=6.1e-05 Score=66.41 Aligned_cols=83 Identities=24% Similarity=0.317 Sum_probs=63.9
Q ss_pred HHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccc-----hhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEE-----LTSLESFRNKARLLSQI-RHRNIVKLYGFC 472 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~-----~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 472 (482)
......|...+.+|+|..+.|.++.. +.|...|+|++....... ....+.-.+|+.|++++ .||+|+.+.++|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 34456677888999999999888774 468899999986432221 11235568899999998 599999999999
Q ss_pred EeCCEEEEEC
Q 036034 473 LHRKCMFLIY 482 (482)
Q Consensus 473 ~~~~~~~lv~ 482 (482)
.++...++|+
T Consensus 93 es~sF~FlVF 102 (411)
T KOG0599|consen 93 ESDAFVFLVF 102 (411)
T ss_pred cCcchhhhhh
Confidence 9998888875
No 450
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.51 E-value=5.7e-05 Score=76.48 Aligned_cols=69 Identities=26% Similarity=0.470 Sum_probs=54.1
Q ss_pred ccccceeCccCcEE-EEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEEEE
Q 036034 406 FHIKYCIGTGGYGS-VYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 406 ~~~~~~ig~g~~g~-v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv 481 (482)
|...+++|.|+-|+ ||+|.+ .|+.||||++-.. ...--.+||..+..-+ |||||++++.-.+++..||.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa 581 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA 581 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence 34456789999986 899998 5889999998431 1123468999999995 99999988888888888875
No 451
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.50 E-value=3.9e-05 Score=69.40 Aligned_cols=80 Identities=19% Similarity=0.343 Sum_probs=66.8
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
...+|...++||+|+|++|..+++ +..+.+|+|++++...++..+...+..|-.++.+- +||.+|.++.++.++..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 346788999999999999999995 45788999999877777666777778888888766 6999999999998888777
Q ss_pred EE
Q 036034 480 LI 481 (482)
Q Consensus 480 lv 481 (482)
.|
T Consensus 328 fv 329 (593)
T KOG0695|consen 328 FV 329 (593)
T ss_pred EE
Confidence 65
No 452
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=97.49 E-value=3.1e-05 Score=72.66 Aligned_cols=71 Identities=24% Similarity=0.416 Sum_probs=52.7
Q ss_pred hcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccc-cchh---hHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 404 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSET-EELT---SLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~-~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
+.|-..+.+|+|+|+.||++. +...+-||||+-.-.+. .+.+ -.+.-++|-+|-+.++||.||++++|+.-
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 346667889999999999998 44567889997642211 1111 13456889999999999999999998754
No 453
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.49 E-value=0.00043 Score=65.04 Aligned_cols=73 Identities=22% Similarity=0.313 Sum_probs=47.1
Q ss_pred hcccccceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhh--------HHHHHHHHHHHhcCCCCCccceeEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTS--------LESFRNKARLLSQIRHRNIVKLYGF 471 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~--------~~~~~~e~~~l~~l~H~niv~l~g~ 471 (482)
+.|...+.||+|+||+||+|+..+ +..+|+|............ ......+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578889999999999999999643 3455666543221110000 0122334455667899999999998
Q ss_pred EEeCC
Q 036034 472 CLHRK 476 (482)
Q Consensus 472 ~~~~~ 476 (482)
+....
T Consensus 92 ~~~~~ 96 (294)
T PHA02882 92 GSFKR 96 (294)
T ss_pred eeEec
Confidence 76543
No 454
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.47 E-value=3.9e-05 Score=67.46 Aligned_cols=112 Identities=24% Similarity=0.277 Sum_probs=76.3
Q ss_pred cCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccC--cceeccCccccCCCCCCEEEccCCccccc-CCc
Q 036034 19 GYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASN--HINVSIPLEIGNLNFLQVLDLSGNEIRGS-IPS 95 (482)
Q Consensus 19 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n--~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~~~ 95 (482)
+.+......+..|+.|++.+..++.. ..|-.|++|++|.++.| .+.+.++.....+++|++|+|++|++... --.
T Consensus 33 g~~~gl~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~ 110 (260)
T KOG2739|consen 33 GKLGGLTDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLR 110 (260)
T ss_pred CCcccccccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccc
Confidence 34555566677888888888877733 23556889999999999 66655555556679999999999988631 122
Q ss_pred cCcCCCCCCEEeCcCCcccccCC---ccccCCCCCCEEEc
Q 036034 96 TFGHLKRLKSLDLSQNKLVGPIP---SSLGHLTQLTTLNM 132 (482)
Q Consensus 96 ~l~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~l 132 (482)
.+..+.+|..|++.+|..+..-- ..|.-+++|.+|+-
T Consensus 111 pl~~l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~ 150 (260)
T KOG2739|consen 111 PLKELENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDG 150 (260)
T ss_pred hhhhhcchhhhhcccCCccccccHHHHHHHHhhhhccccc
Confidence 35567788889998887653111 12445677777753
No 455
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.46 E-value=8.8e-05 Score=72.88 Aligned_cols=89 Identities=17% Similarity=0.311 Sum_probs=71.6
Q ss_pred ccHHHHHHHh---hcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCcccee
Q 036034 394 ITFQDIIEAT---EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLY 469 (482)
Q Consensus 394 ~~~~~~~~~~---~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~ 469 (482)
..|--+.++. ..|...+.||-|.||+|..+. .+....+|.|.+.+...-...+...++.|-.|+++-+.+.||+|+
T Consensus 616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy 695 (1034)
T KOG0608|consen 616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY 695 (1034)
T ss_pred hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence 3455555554 347778899999999999998 445667899999765544445566788999999999999999999
Q ss_pred EEEEeCCEEEEEC
Q 036034 470 GFCLHRKCMFLIY 482 (482)
Q Consensus 470 g~~~~~~~~~lv~ 482 (482)
--|.+++.+|.||
T Consensus 696 ySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 696 YSFQDKDNLYFVM 708 (1034)
T ss_pred EEeccCCceEEEE
Confidence 9999999999997
No 456
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=97.46 E-value=0.00031 Score=61.78 Aligned_cols=71 Identities=20% Similarity=0.209 Sum_probs=50.8
Q ss_pred eeCccCcEEEEEEEcCCCCEEEEEEeccccccc-----hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARLPSGKVVALKKLHCSETEE-----LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~-----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|.+ +|..+++|......... ......+.+|++++..++|+++.....++...+..++||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 76 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVM 76 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
Confidence 389999999999996 57889999864322111 112356789999999999988766666666666566664
No 457
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.40 E-value=4.6e-06 Score=73.51 Aligned_cols=83 Identities=27% Similarity=0.177 Sum_probs=48.3
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceecc-CccccCCCCCCEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSI-PLEIGNLNFLQVL 82 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L 82 (482)
+.+++.|+.-+|++.++ ....+|+.|++|.|+-|+|+.. ..|.+|++|++|+|+.|.|.... -..+.++++|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 34556666667766543 3345567777777777777633 23566777777777777665311 1223555666666
Q ss_pred EccCCccc
Q 036034 83 DLSGNEIR 90 (482)
Q Consensus 83 ~L~~n~~~ 90 (482)
+|..|.-.
T Consensus 94 WL~ENPCc 101 (388)
T KOG2123|consen 94 WLDENPCC 101 (388)
T ss_pred hhccCCcc
Confidence 66655443
No 458
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=97.40 E-value=0.00031 Score=71.86 Aligned_cols=79 Identities=16% Similarity=0.177 Sum_probs=55.0
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEE-eccc-cc---cchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKK-LHCS-ET---EELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~-l~~~-~~---~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
...|...+.||+|+||.||+|.+.... +++|+ +... .. ......+.+.+|++++.+++|++++....++.+.+.
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 344456788999999999999875443 44443 2211 11 111223568999999999999999988888887777
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 411 ~~lv~ 415 (535)
T PRK09605 411 KTIVM 415 (535)
T ss_pred CEEEE
Confidence 77775
No 459
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.27 E-value=0.00018 Score=67.31 Aligned_cols=79 Identities=24% Similarity=0.372 Sum_probs=64.0
Q ss_pred HHHHhhcccccceeCccCcEEEEEEEc-C---CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEE
Q 036034 399 IIEATEDFHIKYCIGTGGYGSVYRARL-P---SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCL 473 (482)
Q Consensus 399 ~~~~~~~~~~~~~ig~g~~g~v~~~~~-~---~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~ 473 (482)
+....+.|...+.||+|+|++||+++. . ..+.||+|.+...... .....|++++.++. |.||+++.+++.
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p-----~ri~~El~~L~~~gG~~ni~~~~~~~r 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP-----SRILNELEMLYRLGGSDNIIKLNGCFR 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc-----hHHHHHHHHHHHhccchhhhcchhhhc
Confidence 344556788899999999999999984 2 4678999998654332 46789999999995 999999999998
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
..+...+|+
T Consensus 106 nnd~v~ivl 114 (418)
T KOG1167|consen 106 NNDQVAIVL 114 (418)
T ss_pred cCCeeEEEe
Confidence 888887774
No 460
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.20 E-value=0.00078 Score=59.17 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=46.9
Q ss_pred HHHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEecccccc--ch-----------------hhHHHHHHHHHHHh
Q 036034 398 DIIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETE--EL-----------------TSLESFRNKARLLS 458 (482)
Q Consensus 398 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~--~~-----------------~~~~~~~~e~~~l~ 458 (482)
++...-..|...+.||+|+||.||++..++|+.||||++...... .. .....+..|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344443346778889999999999999888999999987532200 00 01123678899999
Q ss_pred cCCCCC
Q 036034 459 QIRHRN 464 (482)
Q Consensus 459 ~l~H~n 464 (482)
.+.|++
T Consensus 89 ~l~~~~ 94 (198)
T cd05144 89 ALYEEG 94 (198)
T ss_pred HHHHcC
Confidence 998874
No 461
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=97.19 E-value=0.00032 Score=62.02 Aligned_cols=71 Identities=17% Similarity=0.351 Sum_probs=55.2
Q ss_pred cccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEE
Q 036034 407 HIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 407 ~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~ 479 (482)
+....+|.|+.|.|++++.+ .|..+|||.+.+.. +....+.....++++...+ .|.||+.+|||......+
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHH
Confidence 33456999999999999965 58899999997543 3345567777888887775 899999999998865443
No 462
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.18 E-value=0.00019 Score=63.17 Aligned_cols=93 Identities=22% Similarity=0.287 Sum_probs=69.6
Q ss_pred cCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC--cccccCCccCcCCCCCCEEeCcCCccccc-CCcc
Q 036034 44 NIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN--EIRGSIPSTFGHLKRLKSLDLSQNKLVGP-IPSS 120 (482)
Q Consensus 44 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n--~~~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~ 120 (482)
.+..-......|+.|++.+..++.. ..+..|++|+.|.++.| ++.+.++.-...+++|++|++++|++... --..
T Consensus 34 ~~~gl~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~p 111 (260)
T KOG2739|consen 34 KLGGLTDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRP 111 (260)
T ss_pred Ccccccccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccch
Confidence 3555555677888888888877642 45677899999999999 66666666666779999999999999731 1123
Q ss_pred ccCCCCCCEEEcccccCc
Q 036034 121 LGHLTQLTTLNMRSNLIN 138 (482)
Q Consensus 121 l~~l~~L~~L~l~~n~i~ 138 (482)
+..+++|..|++.+|...
T Consensus 112 l~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 112 LKELENLKSLDLFNCSVT 129 (260)
T ss_pred hhhhcchhhhhcccCCcc
Confidence 567788889999888765
No 463
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=97.17 E-value=0.00034 Score=59.37 Aligned_cols=77 Identities=18% Similarity=0.339 Sum_probs=58.8
Q ss_pred hcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 481 (482)
++......||+|+||.|-+-+ ..+|+..|||++...- ..+..+....|+.+..+. .-|.+|.++|.+.+....+|.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 344445669999999998887 4579999999996432 223446778888877666 699999999999888887776
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 124 M 124 (282)
T KOG0984|consen 124 M 124 (282)
T ss_pred H
Confidence 5
No 464
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.16 E-value=0.00063 Score=59.15 Aligned_cols=75 Identities=16% Similarity=0.328 Sum_probs=56.8
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC-CCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRH-RNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~~~l 480 (482)
.+.|...+.||+|+||.+|.|. +.+|..||+|.=...... -+..-|.++..-++| ..|..+..|..++++-.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h-----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH-----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC-----cchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 4678999999999999999999 678999999974322211 346678888888864 456666667777777777
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 89 VM 90 (341)
T KOG1163|consen 89 VM 90 (341)
T ss_pred ee
Confidence 76
No 465
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=97.14 E-value=3.1e-05 Score=73.98 Aligned_cols=79 Identities=23% Similarity=0.354 Sum_probs=65.8
Q ss_pred hcccccceeCccCcEEEEEEEcCCC-CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSG-KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~-~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++.....+|-|+||.|-.+..... ..+|+|.+++....+.++.+.+..|-.||.+++.|.||+++..|.+.++.|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 3455567799999999999886543 348999998777777777788999999999999999999999999998888765
No 466
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.14 E-value=0.0014 Score=52.99 Aligned_cols=120 Identities=14% Similarity=0.207 Sum_probs=62.5
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
..+++|+.+.+.+ .+.......|..+.+|+.+.+.++ +.......|.++++|+.+.+.. .+.......|..+++|+.
T Consensus 9 ~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~ 85 (129)
T PF13306_consen 9 YNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKN 85 (129)
T ss_dssp TT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECE
T ss_pred hCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccccc
Confidence 4566788888875 455555667888888888888775 6655556788887888888865 444344566777888888
Q ss_pred EEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCC
Q 036034 82 LDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQL 127 (482)
Q Consensus 82 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 127 (482)
+++..+ +.......|.+. +|+.+.+.. .+.......|.++++|
T Consensus 86 i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 86 IDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp EEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 888665 444445566666 888888775 3333444556665555
No 467
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.10 E-value=8e-05 Score=69.40 Aligned_cols=80 Identities=19% Similarity=0.284 Sum_probs=64.8
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (482)
..+|....+||+|+||+|..|+-+ ....+|||+++++......+++--+.|-++++-. +-|.+|+++.++.+-+.+|.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 356778899999999999999854 4668999999876555445555667788888866 58899999999999999998
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 428 VM 429 (683)
T KOG0696|consen 428 VM 429 (683)
T ss_pred EE
Confidence 86
No 468
>smart00090 RIO RIO-like kinase.
Probab=97.08 E-value=0.0012 Score=59.50 Aligned_cols=59 Identities=27% Similarity=0.153 Sum_probs=43.5
Q ss_pred cccccceeCccCcEEEEEEE--cCCCCEEEEEEeccccccc-------------------hh--hHHHHHHHHHHHhcCC
Q 036034 405 DFHIKYCIGTGGYGSVYRAR--LPSGKVVALKKLHCSETEE-------------------LT--SLESFRNKARLLSQIR 461 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~--~~~~~~vavK~l~~~~~~~-------------------~~--~~~~~~~e~~~l~~l~ 461 (482)
.|...+.||+|+||.||+|. ..+|+.||+|.+....... .. ....+..|++++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57778899999999999998 5689999999986432110 00 1123678999999997
Q ss_pred CC
Q 036034 462 HR 463 (482)
Q Consensus 462 H~ 463 (482)
|.
T Consensus 109 ~~ 110 (237)
T smart00090 109 EA 110 (237)
T ss_pred hc
Confidence 63
No 469
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.07 E-value=0.0011 Score=63.54 Aligned_cols=75 Identities=23% Similarity=0.421 Sum_probs=57.7
Q ss_pred hcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-----CC---CccceeEEEEe
Q 036034 404 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-----HR---NIVKLYGFCLH 474 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-----H~---niv~l~g~~~~ 474 (482)
+.|.+.+++|=|.|++||.++ ....+.||+|+.+..... .+.-..||+++.+++ |+ .||+|+++|.-
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY----tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY----TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH----HHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 578889999999999999998 446789999998653322 244567999999874 32 68999999865
Q ss_pred ----CCEEEEEC
Q 036034 475 ----RKCMFLIY 482 (482)
Q Consensus 475 ----~~~~~lv~ 482 (482)
+.+.+||+
T Consensus 154 sGpNG~HVCMVf 165 (590)
T KOG1290|consen 154 SGPNGQHVCMVF 165 (590)
T ss_pred cCCCCcEEEEEe
Confidence 35677774
No 470
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=97.06 E-value=0.00095 Score=60.46 Aligned_cols=60 Identities=18% Similarity=0.196 Sum_probs=47.4
Q ss_pred cCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 415 GGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 415 g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|.||.||+++. .+++.+|+|++.... .+.+|...+....||||+++++++.+.+..++||
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 64 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVL 64 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEE
Confidence 89999999994 468999999986432 2334555555667999999999999999988875
No 471
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.98 E-value=0.00029 Score=62.21 Aligned_cols=66 Identities=32% Similarity=0.446 Sum_probs=52.8
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEE
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFC 472 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 472 (482)
.+.++-||-|.||.||.++. ++|+.||.|++.. ..+.....+.|.+|++++.-++|.|+...++.-
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfFkHdNVLSaLDIL 121 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSFRHDNVLSLLDIL 121 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhhccccHHHHHHhc
Confidence 34567899999999999995 4799999998853 233445568899999999999999998876653
No 472
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.89 E-value=2e-05 Score=69.65 Aligned_cols=100 Identities=23% Similarity=0.221 Sum_probs=73.9
Q ss_pred CCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCccccc-CCccCcCCCCCCEE
Q 036034 28 LSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGS-IPSTFGHLKRLKSL 106 (482)
Q Consensus 28 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~~~~l~~l~~L~~L 106 (482)
+.+.+.|++-+|.+.++ ..+..|+.|+.|.|+-|+|+.. ..+..+++|++|+|..|.|... --..+.++++|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 55778889999988854 3467899999999999999853 3467789999999999998742 12457788999999
Q ss_pred eCcCCcccccCCc-----cccCCCCCCEEE
Q 036034 107 DLSQNKLVGPIPS-----SLGHLTQLTTLN 131 (482)
Q Consensus 107 ~L~~n~l~~~~~~-----~l~~l~~L~~L~ 131 (482)
+|..|.=.+..+. .+.-+++|+.|+
T Consensus 94 WL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 94 WLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhccCCcccccchhHHHHHHHHcccchhcc
Confidence 9998876554443 234466666554
No 473
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=96.80 E-value=0.0024 Score=52.93 Aligned_cols=68 Identities=13% Similarity=0.046 Sum_probs=53.1
Q ss_pred cceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC--CCccceeEEEEeCCEEEEEC
Q 036034 409 KYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRH--RNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ 482 (482)
.+.+|+|.++.||++.... ..+++|....... ...+.+|+.++..++| +.++++++++..++..+++|
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~ 72 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLM 72 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEE
Confidence 4669999999999999744 7899998754322 3578899999999976 58899888887766666654
No 474
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=96.76 E-value=3.1e-05 Score=72.28 Aligned_cols=267 Identities=19% Similarity=0.173 Sum_probs=0.0
Q ss_pred CCEEeCcCCcccccCC--ccccCCCCCCeeecccCccee--ccCccccCCCCCCEEEccCC-cccccCCccCcC-CCCCC
Q 036034 31 LENLHLSSNSLVGNIP--STLGHLTQLTTLAIASNHINV--SIPLEIGNLNFLQVLDLSGN-EIRGSIPSTFGH-LKRLK 104 (482)
Q Consensus 31 L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~n-~~~~~~~~~l~~-l~~L~ 104 (482)
|+.|.+.++.-.+.-+ ..-.+++++++|.+.++.... ..-..=..++.|++|+|..| .++...-..++. +++|+
T Consensus 140 lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~ 219 (483)
T KOG4341|consen 140 LKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLK 219 (483)
T ss_pred cccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHH
Q ss_pred EEeCcCCccccc--CCccccCCCCCCEEEcccccCccc---------ccCcCEEEcccCeecc--cCCccCcCCCCCCEE
Q 036034 105 SLDLSQNKLVGP--IPSSLGHLTQLTTLNMRSNLINAS---------LVNLTSLSLHYNNLTG--PIPSTLGHLNRIRIL 171 (482)
Q Consensus 105 ~L~L~~n~l~~~--~~~~l~~l~~L~~L~l~~n~i~~~---------~~~L~~L~l~~n~~~~--~~~~~~~~l~~L~~L 171 (482)
+|+++.+.-... +.....++..++.+.+.+|.-... ...+..+++..+..-. .+...-..+..|+.|
T Consensus 220 ~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l 299 (483)
T KOG4341|consen 220 YLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVL 299 (483)
T ss_pred HhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhhh
Q ss_pred EccCCccccCCC--cCCcCCCCCCEEeccCC-ccccccCccCc-CCCCCCeeeccCCcc--cCCCCccCcCCCCCCEEEc
Q 036034 172 DLSENKLVGPIP--SSVGHLTQLNTLNMYSN-QINGSIPLEIG-NLKRVEAVKLYDNKL--DGPIPPELMNCSKLMELEL 245 (482)
Q Consensus 172 ~l~~n~l~~~~~--~~~~~l~~L~~L~l~~n-~l~~~~~~~~~-~l~~L~~L~l~~n~l--~~~~~~~~~~~~~L~~L~l 245 (482)
+.+++.-.+..+ ..-.+..+|+.|-+..+ ++++.-...++ +.+.|+.+++..+.. .+++...-.+++.|+.|.+
T Consensus 300 ~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lsl 379 (483)
T KOG4341|consen 300 CYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSL 379 (483)
T ss_pred cccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCCh
Q ss_pred CCCcCcccC-----CccccCccCCCEEeccCCc-CccccchhhcCCCCCCEEECCCCc
Q 036034 246 GNNLLRGSI-----PSEIGKLQELYYLDLSHNF-INGKILSELGAIPSIDTVDLSMNN 297 (482)
Q Consensus 246 ~~n~l~~~~-----~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~l~l~~n~ 297 (482)
+.+...... ...-.....|..+.+++++ +.......+..+++|+.+++-+++
T Consensus 380 shce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 380 SHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred hhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
No 475
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=96.44 E-value=0.008 Score=52.11 Aligned_cols=31 Identities=35% Similarity=0.303 Sum_probs=26.9
Q ss_pred cceeCccCcEEEEEEEcCCCCEEEEEEeccc
Q 036034 409 KYCIGTGGYGSVYRARLPSGKVVALKKLHCS 439 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~ 439 (482)
.+.||+|+||+||+|...+++.||||++...
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~ 32 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTG 32 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecC
Confidence 4579999999999999878999999988643
No 476
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=96.43 E-value=0.013 Score=55.54 Aligned_cols=74 Identities=35% Similarity=0.587 Sum_probs=59.0
Q ss_pred ccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCC-CccceeEEEEeCCEEEEE
Q 036034 406 FHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHR-NIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv 481 (482)
|.....+|.|+||.||++... ..+|+|.+.............|.+|+.+++.+.|+ +++++.+++......+++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLV 76 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEE
Confidence 556778999999999999975 78899999755443333457899999999999988 799999999766655554
No 477
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.37 E-value=0.0072 Score=57.55 Aligned_cols=75 Identities=20% Similarity=0.304 Sum_probs=55.5
Q ss_pred cccccceeCccCcEEEEEEEcCC--CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC----CCccceeEEE-EeCCE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLPS--GKVVALKKLHCSETEELTSLESFRNKARLLSQIRH----RNIVKLYGFC-LHRKC 477 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~~--~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H----~niv~l~g~~-~~~~~ 477 (482)
.|...+.||+|+||.||.+.... ...+|+|.-....... . ..+..|+.++..+.+ +++.++++.. .++++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~--~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK--P-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC--C-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 78999999999999999999543 3478888764332211 1 256778888888863 5888888888 47778
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.||||
T Consensus 96 ~~iVM 100 (322)
T KOG1164|consen 96 NFIVM 100 (322)
T ss_pred eEEEE
Confidence 88886
No 478
>PRK12274 serine/threonine protein kinase; Provisional
Probab=96.23 E-value=0.016 Score=50.55 Aligned_cols=63 Identities=13% Similarity=0.097 Sum_probs=44.7
Q ss_pred ccceeCccCcEEEEEEEcCCCCEEEEEEecccccc-chhhHHHHHHHHHHHhcCC-CCCccceeEE
Q 036034 408 IKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETE-ELTSLESFRNKARLLSQIR-HRNIVKLYGF 471 (482)
Q Consensus 408 ~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~~~e~~~l~~l~-H~niv~l~g~ 471 (482)
....+++|+||+||.+.- .++.++.+.+.....- .......|.+|++++.++. |+++++++++
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~ 70 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW 70 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 456799999999997665 5777787776532211 0111235889999999995 5788888875
No 479
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=96.23 E-value=0.0031 Score=62.46 Aligned_cols=73 Identities=21% Similarity=0.320 Sum_probs=58.0
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (482)
+..|.....+|.|+|+.|-++. .++++..|||++..... +-.+|+.++... +||||+++.+.|.+..+.|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCceeee
Confidence 5567777779999999998888 45688899999965422 123567666666 59999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 394 v~ 395 (612)
T KOG0603|consen 394 VM 395 (612)
T ss_pred ee
Confidence 86
No 480
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=96.19 E-value=0.0058 Score=62.76 Aligned_cols=37 Identities=32% Similarity=0.503 Sum_probs=31.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-C----CCEEEEEEecc
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-S----GKVVALKKLHC 438 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~----~~~vavK~l~~ 438 (482)
..++|...+.||+|+||.||+|+.. + +..||+|++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 5678999999999999999999964 4 68999998753
No 481
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=95.92 E-value=0.0027 Score=58.98 Aligned_cols=76 Identities=20% Similarity=0.289 Sum_probs=56.9
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC--CC----CccceeEEEEeC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR--HR----NIVKLYGFCLHR 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~--H~----niv~l~g~~~~~ 475 (482)
.+.|.....+|+|+||+|..+.. ..+..||+|+++..... .+.-.-|++++.++. .| .+|.+.+++.-.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY----reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY----REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH----hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 56788889999999999999884 34789999998643222 245567899999883 22 367887888778
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
++.+||+
T Consensus 164 ghiCivf 170 (415)
T KOG0671|consen 164 GHICIVF 170 (415)
T ss_pred CceEEEE
Confidence 8887774
No 482
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=95.72 E-value=0.016 Score=58.37 Aligned_cols=36 Identities=31% Similarity=0.393 Sum_probs=30.4
Q ss_pred hhcccccceeCccCcEEEEEEEcCC-CCEEEEEEeccc
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHCS 439 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~l~~~ 439 (482)
..+|+. +.+|+|++|+||+|++++ |+.||||++.+.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~ 155 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD 155 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence 345665 679999999999999877 999999999754
No 483
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.69 E-value=0.0055 Score=32.10 Aligned_cols=12 Identities=58% Similarity=0.927 Sum_probs=4.9
Q ss_pred CCEEEccCCccc
Q 036034 79 LQVLDLSGNEIR 90 (482)
Q Consensus 79 L~~L~L~~n~~~ 90 (482)
|++|||++|+++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 334444444443
No 484
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.56 E-value=0.0064 Score=31.84 Aligned_cols=19 Identities=32% Similarity=0.555 Sum_probs=9.1
Q ss_pred CCeeecccCcceeccCcccc
Q 036034 55 LTTLAIASNHINVSIPLEIG 74 (482)
Q Consensus 55 L~~L~l~~n~l~~~~~~~~~ 74 (482)
|++|+|++|+++ .+|..|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 455555555554 3444343
No 485
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.50 E-value=0.00093 Score=67.56 Aligned_cols=15 Identities=7% Similarity=0.007 Sum_probs=7.5
Q ss_pred cCCCCCCeeeccCCc
Q 036034 211 GNLKRVEAVKLYDNK 225 (482)
Q Consensus 211 ~~l~~L~~L~l~~n~ 225 (482)
..++.++.+.+..+.
T Consensus 359 ~~~~~l~~~~l~~~~ 373 (482)
T KOG1947|consen 359 RSCPKLTDLSLSYCG 373 (482)
T ss_pred hcCCCcchhhhhhhh
Confidence 344555555555544
No 486
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=95.49 E-value=0.0039 Score=56.14 Aligned_cols=73 Identities=29% Similarity=0.399 Sum_probs=53.6
Q ss_pred Hhhccccc-ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEe----
Q 036034 402 ATEDFHIK-YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLH---- 474 (482)
Q Consensus 402 ~~~~~~~~-~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~---- 474 (482)
.+++|... .+||-|-.|+|..+.. ..++.+|+|++... ..-.+|+++--.. .|||||+++++|..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 45566554 5799999999988884 46889999988532 2345778776555 59999999998754
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
.+++.+||
T Consensus 131 rkcLLiVm 138 (400)
T KOG0604|consen 131 RKCLLIVM 138 (400)
T ss_pred ceeeEeee
Confidence 46677775
No 487
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.49 E-value=0.00082 Score=67.97 Aligned_cols=15 Identities=20% Similarity=0.069 Sum_probs=8.3
Q ss_pred cCCCCCCEEEccCCc
Q 036034 163 GHLNRIRILDLSENK 177 (482)
Q Consensus 163 ~~l~~L~~L~l~~n~ 177 (482)
..+++++.+.+..+.
T Consensus 359 ~~~~~l~~~~l~~~~ 373 (482)
T KOG1947|consen 359 RSCPKLTDLSLSYCG 373 (482)
T ss_pred hcCCCcchhhhhhhh
Confidence 445555555555555
No 488
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=95.37 E-value=0.0094 Score=57.80 Aligned_cols=83 Identities=18% Similarity=0.418 Sum_probs=62.2
Q ss_pred ccHHHHHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC------CCcc
Q 036034 394 ITFQDIIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRH------RNIV 466 (482)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H------~niv 466 (482)
+.+.|+.. ..|.+.-..|+|-|+.|.+|.. ..|..||||+|.....+- +.=..|++|+.++.. -+.+
T Consensus 424 v~igE~LD--~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~----KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 424 VRIGELLD--SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH----KTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred Eehhhhhc--ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh----hhhhHHHHHHHHhhccCchhhhHHH
Confidence 34444443 5677778899999999999984 458899999996543332 344578999998842 2788
Q ss_pred ceeEEEEeCCEEEEEC
Q 036034 467 KLYGFCLHRKCMFLIY 482 (482)
Q Consensus 467 ~l~g~~~~~~~~~lv~ 482 (482)
+++..|....+++|||
T Consensus 498 rl~r~F~hknHLClVF 513 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVF 513 (752)
T ss_pred HHHHHhhhcceeEEEe
Confidence 8888888889999986
No 489
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.37 E-value=3.5e-05 Score=76.21 Aligned_cols=61 Identities=25% Similarity=0.237 Sum_probs=33.5
Q ss_pred CCeeeccCCcccCC----CCccCcCC-CCCCEEEcCCCcCcccCC----ccccCccCCCEEeccCCcCcc
Q 036034 216 VEAVKLYDNKLDGP----IPPELMNC-SKLMELELGNNLLRGSIP----SEIGKLQELYYLDLSHNFING 276 (482)
Q Consensus 216 L~~L~l~~n~l~~~----~~~~~~~~-~~L~~L~l~~n~l~~~~~----~~~~~~~~L~~L~l~~n~l~~ 276 (482)
+..+++..|.+.+. ..+.+..+ +.++.++++.|.+++... ..+..++.++.+.+++|.+..
T Consensus 235 ~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 235 LRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred hHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 44456666655432 11223333 456677777776665433 333455677777777777654
No 490
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.14 E-value=0.032 Score=51.22 Aligned_cols=72 Identities=22% Similarity=0.381 Sum_probs=47.8
Q ss_pred cccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 481 (482)
.|.+.+.||+|+||.++.|+ +-+++.||||.=.. +... -++..|-+..+-+ .-+.|...+-|-.++.+-.||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~A----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEA----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc-cCCc----chHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 68889999999999999999 56799999996432 2111 2334444444444 467777766555555444444
No 491
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=95.11 E-value=0.003 Score=55.94 Aligned_cols=71 Identities=21% Similarity=0.333 Sum_probs=53.0
Q ss_pred cceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 409 KYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
..++.+...|..|+|+|. |..+++|++....... .-.++|..|..-++-+.||||.+++|.|.++....+|
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacnsppnlv~i 265 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVII 265 (448)
T ss_pred hhhhccCCCccccccccc-Ccchhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhccCCCCceEe
Confidence 345788889999999995 5556667664322221 1236799998888888999999999999998776654
No 492
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=95.09 E-value=0.027 Score=55.84 Aligned_cols=30 Identities=37% Similarity=0.381 Sum_probs=27.2
Q ss_pred ceeCccCcEEEEEEEcCCCCEEEEEEeccc
Q 036034 410 YCIGTGGYGSVYRARLPSGKVVALKKLHCS 439 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~~~~vavK~l~~~ 439 (482)
+.||.|++|+||+|++++|+.||||+..+.
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~ 152 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPG 152 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence 679999999999999999999999998653
No 493
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=95.04 E-value=0.0097 Score=47.15 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=30.4
Q ss_pred HhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccc
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCS 439 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~ 439 (482)
....|+ ...+|.|+.|+||+|++++|+.||||+..+.
T Consensus 10 ~F~~fd-~~PlasASiaQVh~a~l~~g~~VaVKV~rP~ 46 (119)
T PF03109_consen 10 IFDEFD-PEPLASASIAQVHRARLKDGEEVAVKVQRPG 46 (119)
T ss_pred HHHHCC-cchhhheehhhheeeeecccchhhhhhcchH
Confidence 344454 4679999999999999999999999998653
No 494
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.74 E-value=0.00012 Score=72.64 Aligned_cols=174 Identities=25% Similarity=0.315 Sum_probs=87.0
Q ss_pred CCEEeCcCCccccc----CCccccCCCCCCeeecccCcceeccCc----cccCC-CCCCEEEccCCccccc----CCccC
Q 036034 31 LENLHLSSNSLVGN----IPSTLGHLTQLTTLAIASNHINVSIPL----EIGNL-NFLQVLDLSGNEIRGS----IPSTF 97 (482)
Q Consensus 31 L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~----~~~~l-~~L~~L~L~~n~~~~~----~~~~l 97 (482)
+..|.|.+|.+.+. +...+..++.|..|+++.|.+....-. .+... ..|++|++..|.++.. +.+.+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 44455555544432 222333444555555555555421111 11111 2344455555544332 33334
Q ss_pred cCCCCCCEEeCcCCcccc----cCCcc----ccCCCCCCEEEcccccCccc-----------ccC-cCEEEcccCeeccc
Q 036034 98 GHLKRLKSLDLSQNKLVG----PIPSS----LGHLTQLTTLNMRSNLINAS-----------LVN-LTSLSLHYNNLTGP 157 (482)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~----~~~~~----l~~l~~L~~L~l~~n~i~~~-----------~~~-L~~L~l~~n~~~~~ 157 (482)
.....++.++++.|.+.. .++.. +....++++|.+.+|.++.. .+. +..+++..|.+.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 444555555555555421 11112 22355566666666655421 222 44567777766532
Q ss_pred ----CCccCcCC-CCCCEEEccCCccccCCC----cCCcCCCCCCEEeccCCcccc
Q 036034 158 ----IPSTLGHL-NRIRILDLSENKLVGPIP----SSVGHLTQLNTLNMYSNQING 204 (482)
Q Consensus 158 ----~~~~~~~l-~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~l~~ 204 (482)
+...+..+ ..++.+++..|.++.... ..+..++.++.+.++.|.+.+
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 23344445 667888888888865433 344566788888888887764
No 495
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=94.56 E-value=0.00078 Score=58.24 Aligned_cols=88 Identities=20% Similarity=0.254 Sum_probs=57.3
Q ss_pred ccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCC
Q 036034 24 TLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRL 103 (482)
Q Consensus 24 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L 103 (482)
++..+...+.||++.|++. .+-..|+-++.|..|+++.|++. ..|..+..+..+..+++..|..+ ..|.+++..+++
T Consensus 37 ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~ 113 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHP 113 (326)
T ss_pred hhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCc
Confidence 4445566677777777665 44455666666777777777765 56666666666666677666665 566667777777
Q ss_pred CEEeCcCCccc
Q 036034 104 KSLDLSQNKLV 114 (482)
Q Consensus 104 ~~L~L~~n~l~ 114 (482)
+++++..|.+.
T Consensus 114 k~~e~k~~~~~ 124 (326)
T KOG0473|consen 114 KKNEQKKTEFF 124 (326)
T ss_pred chhhhccCcch
Confidence 77766666543
No 496
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.39 E-value=0.043 Score=58.54 Aligned_cols=54 Identities=35% Similarity=0.489 Sum_probs=39.5
Q ss_pred HhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR 461 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~ 461 (482)
..+.|.+...+|+|+||+||.|.-.+|+.||+|+=++.. . .+|.---+++.|++
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~--~----WEfYI~~q~~~RLk 749 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN--P----WEFYICLQVMERLK 749 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC--c----eeeeehHHHHHhhc
Confidence 446688889999999999999998789999999864321 1 33444445566665
No 497
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=93.16 E-value=0.18 Score=44.82 Aligned_cols=71 Identities=14% Similarity=0.204 Sum_probs=49.7
Q ss_pred ceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC--CCccceeEEEEeCC---EEEEEC
Q 036034 410 YCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRH--RNIVKLYGFCLHRK---CMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~---~~~lv~ 482 (482)
+.++.|.++.||+++..+|+.+++|........ .....+.+|++++..+++ .++.++++++.+.+ ..++||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 458999999999999876788999987543221 123568899999999875 34567777766532 345553
No 498
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=92.85 E-value=0.063 Score=47.95 Aligned_cols=64 Identities=20% Similarity=0.347 Sum_probs=48.8
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYG 470 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g 470 (482)
.+.|.+.+.+|+|-||++-.++.+ +.+.+++|.+.+.. ...++|.+|-..--.+ .|.||+.-++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~ 88 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYE 88 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHH
Confidence 346778889999999999999965 57788999886432 2347899998766566 4999986654
No 499
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=92.80 E-value=0.0018 Score=56.01 Aligned_cols=86 Identities=20% Similarity=0.199 Sum_probs=74.1
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
.....+.||++.|.+. ..-.-|..+..|.+|+++.|.+. ..|..++.+..++.+++..|+.+ ..|.++..+++++++
T Consensus 40 ~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~ 116 (326)
T KOG0473|consen 40 SFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKN 116 (326)
T ss_pred ccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchh
Confidence 4567789999999875 34555777888999999999988 88999999999999999999987 789999999999999
Q ss_pred EccCCcccc
Q 036034 83 DLSGNEIRG 91 (482)
Q Consensus 83 ~L~~n~~~~ 91 (482)
++..|.+..
T Consensus 117 e~k~~~~~~ 125 (326)
T KOG0473|consen 117 EQKKTEFFR 125 (326)
T ss_pred hhccCcchH
Confidence 999998753
No 500
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=92.80 E-value=0.26 Score=44.57 Aligned_cols=65 Identities=15% Similarity=0.147 Sum_probs=45.0
Q ss_pred cceeC-ccCcEEEEEEEcCCCCEEEEEEeccccc----------cchhhHHHHHHHHHHHhcCCCCCc--cceeEEEEe
Q 036034 409 KYCIG-TGGYGSVYRARLPSGKVVALKKLHCSET----------EELTSLESFRNKARLLSQIRHRNI--VKLYGFCLH 474 (482)
Q Consensus 409 ~~~ig-~g~~g~v~~~~~~~~~~vavK~l~~~~~----------~~~~~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~ 474 (482)
...+| .|+.|+||.++.. +..+++|+...... ........+.+|++++.+++|+++ ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 35687 8888999988874 77889987743111 011223568899999999998885 667776543
Done!